BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004094
         (774 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225443992|ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
          Length = 1068

 Score = 1485 bits (3845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/766 (95%), Positives = 750/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 303  QLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 362

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 363  NGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETEIEG 422

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELRNEWK+P GYSVNVATANA+QVLL
Sbjct: 423  FCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQVLL 482

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPIGENP++SQ+AAVGMWTDISVRIF
Sbjct: 483  ATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIGENPNFSQLAAVGMWTDISVRIF 542

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCALGDGHLLNFLLNM TGELTDRKKV
Sbjct: 543  SLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTGELTDRKKV 602

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 603  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 662

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK NQS  E+SE
Sbjct: 663  SLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNQSSTEDSE 722

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR
Sbjct: 723  MHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 782

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 
Sbjct: 783  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSES 842

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD
Sbjct: 843  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 902

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 903  IYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 962

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKVIKGVGGL+HEQWRSFNNEKKTVD
Sbjct: 963  IPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVD 1022

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            AKNFLDGDLIE+FLDL+RTRMDEISK M VSVEELCKRVEELTRLH
Sbjct: 1023 AKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEELTRLH 1068


>gi|225443990|ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/766 (95%), Positives = 750/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELRNEWK+P GYSVNVATANA+QVLL
Sbjct: 444  FCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPIGENP++SQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIGENPNFSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCALGDGHLLNFLLNM TGELTDRKKV
Sbjct: 564  SLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTGELTDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK NQS  E+SE
Sbjct: 684  SLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNQSSTEDSE 743

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR
Sbjct: 744  MHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 803

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 
Sbjct: 804  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSES 863

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD
Sbjct: 864  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 923

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 924  IYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 983

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKVIKGVGGL+HEQWRSFNNEKKTVD
Sbjct: 984  IPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKVIKGVGGLSHEQWRSFNNEKKTVD 1043

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            AKNFLDGDLIE+FLDL+RTRMDEISK M VSVEELCKRVEELTRLH
Sbjct: 1044 AKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEELTRLH 1089


>gi|224061051|ref|XP_002300334.1| predicted protein [Populus trichocarpa]
 gi|222847592|gb|EEE85139.1| predicted protein [Populus trichocarpa]
          Length = 1088

 Score = 1476 bits (3821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/765 (94%), Positives = 746/765 (97%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNL PDAKG+YVEVL+RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLVKLNLHPDAKGTYVEVLDRYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRS TDDPFDTFLVVSFISETRILAMN+EDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSLTDDPFDTFLVVSFISETRILAMNIEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCH A++NQLVQVTS SVRLVSST+RELR EW +P GYS+NVATANA+QVLL
Sbjct: 444  FCSQVQTLFCHCAVFNQLVQVTSSSVRLVSSTTRELRQEWNAPSGYSINVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LT+ KHAQLE EISCLDINPIGENP+YSQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTQAKHAQLECEISCLDINPIGENPNYSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE LGGEIIPRSVLLC+FEGI+YLLCALGDGHLLNFLLN+ TG L DRKKV
Sbjct: 564  SLPDLNLITKEPLGGEIIPRSVLLCSFEGIAYLLCALGDGHLLNFLLNLSTGGLKDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIAKEGEL+IGTIDDIQKLHIRSIPLGEH RRICHQEQSRTF+ICS+KNQS AEESEM
Sbjct: 684  SLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFSICSMKNQSNAEESEM 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI
Sbjct: 924  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLPHEQYLFLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTVDA
Sbjct: 984  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVDA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            KNFLDGDLIESFLDLSR+RMDEISK M +SVEELCKRVEELTRLH
Sbjct: 1044 KNFLDGDLIESFLDLSRSRMDEISKAMEISVEELCKRVEELTRLH 1088


>gi|356525403|ref|XP_003531314.1| PREDICTED: DNA damage-binding protein 1-like isoform 2 [Glycine max]
          Length = 1068

 Score = 1459 bits (3776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/766 (93%), Positives = 746/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 303  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 362

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 363  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 422

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA++NQLVQVTS SVRLVSST+R+LRNEW +P GYSVNVATANA+QVLL
Sbjct: 423  FCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLRNEWHAPSGYSVNVATANATQVLL 482

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPIGENP++S +AAVGMWTDISVRIF
Sbjct: 483  ATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIGENPNHSNLAAVGMWTDISVRIF 542

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF+LN  TGELTDRKKV
Sbjct: 543  SLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELTDRKKV 602

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 603  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 662

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK N +  E+SE
Sbjct: 663  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNPASGEDSE 722

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD+NVYYCVGTAYVLPEENEPTKGR
Sbjct: 723  MHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGR 782

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            I+VF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAINQKIQLYKW+LRDDGT ELQSEC
Sbjct: 783  IIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC 842

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI+DDD
Sbjct: 843  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDD 902

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 903  IYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 962

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTV+
Sbjct: 963  IPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVE 1022

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCKRVEELTRLH
Sbjct: 1023 ARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCKRVEELTRLH 1068


>gi|356512638|ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
          Length = 1068

 Score = 1457 bits (3772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/766 (93%), Positives = 744/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVE LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 303  QLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 362

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 363  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 422

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA++NQLVQVTS SVRLVSST+RELRNEW +P GYSVNVATANA+QVLL
Sbjct: 423  FCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRNEWHAPSGYSVNVATANATQVLL 482

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPIGENP++S +AAVGMWTDISVRIF
Sbjct: 483  ATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIGENPNHSHLAAVGMWTDISVRIF 542

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF+LN  TGEL DRKKV
Sbjct: 543  SLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELADRKKV 602

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 603  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 662

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK N +  E+SE
Sbjct: 663  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNPASGEDSE 722

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD+NVYYCVGTAYVLPEENEPTKGR
Sbjct: 723  MHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGR 782

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAINQKIQLYKW+LRDDGT ELQSEC
Sbjct: 783  ILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC 842

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI+DDD
Sbjct: 843  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDD 902

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 903  IYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 962

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTV+
Sbjct: 963  IPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVE 1022

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCKRVEELTRLH
Sbjct: 1023 ARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEELTRLH 1068


>gi|356525401|ref|XP_003531313.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Glycine max]
          Length = 1089

 Score = 1457 bits (3772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/766 (93%), Positives = 746/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 324  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA++NQLVQVTS SVRLVSST+R+LRNEW +P GYSVNVATANA+QVLL
Sbjct: 444  FCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRDLRNEWHAPSGYSVNVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPIGENP++S +AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIGENPNHSNLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF+LN  TGELTDRKKV
Sbjct: 564  SLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELTDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK N +  E+SE
Sbjct: 684  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNPASGEDSE 743

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD+NVYYCVGTAYVLPEENEPTKGR
Sbjct: 744  MHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGR 803

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            I+VF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAINQKIQLYKW+LRDDGT ELQSEC
Sbjct: 804  IIVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC 863

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI+DDD
Sbjct: 864  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDD 923

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 924  IYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 983

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTV+
Sbjct: 984  IPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVE 1043

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCKRVEELTRLH
Sbjct: 1044 ARNFLDGDLIESFLDLNRSKMDEISKAVDVSVEELCKRVEELTRLH 1089


>gi|255571318|ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
 gi|223534048|gb|EEF35767.1| DNA repair protein xp-E, putative [Ricinus communis]
          Length = 1033

 Score = 1456 bits (3770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 718/765 (93%), Positives = 745/765 (97%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQPDAKGSYVEVLE YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 269  QLVKLNLQPDAKGSYVEVLESYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 328

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 329  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 388

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCH A+YNQLVQVTS SVRLVSST+REL+NEW +P GYS+NVATANA+QVLL
Sbjct: 389  FCSQVQTLFCHYAVYNQLVQVTSSSVRLVSSTTRELQNEWHAPAGYSINVATANATQVLL 448

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LT  KHAQLE EISCLDINPIGENP+YSQ+AAVGMWTDISVRIF
Sbjct: 449  ATGGGHLVYLEIGDGTLTHTKHAQLECEISCLDINPIGENPNYSQLAAVGMWTDISVRIF 508

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKEHLGGEIIPRSVLLC+FEGISYLLCALGDGHLLNFLLN+ TGELTDRKKV
Sbjct: 509  SLPDLNLITKEHLGGEIIPRSVLLCSFEGISYLLCALGDGHLLNFLLNLNTGELTDRKKV 568

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 569  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 628

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFA+CSLKNQ+ AEESE 
Sbjct: 629  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAVCSLKNQASAEESET 688

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HF+RLLDDQTFEFISTY LD FEYGCSILSCSFSDD+N+YYCVGTAYV+PEENEPTKGRI
Sbjct: 689  HFIRLLDDQTFEFISTYQLDPFEYGCSILSCSFSDDNNLYYCVGTAYVMPEENEPTKGRI 748

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVF+VEDGKLQ+I EKETKGAVYSLN+FNGKLLAAINQKIQLYKWMLRDDG+RELQSECG
Sbjct: 749  LVFLVEDGKLQVITEKETKGAVYSLNSFNGKLLAAINQKIQLYKWMLRDDGSRELQSECG 808

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 809  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 868

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI
Sbjct: 869  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 928

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLPHEQY+FLEKLQ+NLR+VIKGVGGL+HEQWRSFNNEKKTV+A
Sbjct: 929  PTVIFGTVNGVIGVIASLPHEQYIFLEKLQSNLRRVIKGVGGLSHEQWRSFNNEKKTVEA 988

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            KNFLDGDLIESFLDLSR RMDEISK + VSVEELCKRVEELTRLH
Sbjct: 989  KNFLDGDLIESFLDLSRNRMDEISKAIGVSVEELCKRVEELTRLH 1033


>gi|356512636|ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
          Length = 1089

 Score = 1456 bits (3768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 714/766 (93%), Positives = 744/766 (97%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVE LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 324  QLIKLNLQPDAKGSYVEGLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA++NQLVQVTS SVRLVSST+RELRNEW +P GYSVNVATANA+QVLL
Sbjct: 444  FCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTTRELRNEWHAPSGYSVNVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPIGENP++S +AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIGENPNHSHLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL+LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF+LN  TGEL DRKKV
Sbjct: 564  SLPDLSLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFMLNTSTGELADRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK N +  E+SE
Sbjct: 684  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNPASGEDSE 743

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTY LDT+EYGC I+SCSFSDD+NVYYCVGTAYVLPEENEPTKGR
Sbjct: 744  MHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGR 803

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVF VEDGKLQLIAEKETKGAVY LNAFNGKLLAAINQKIQLYKW+LRDDGT ELQSEC
Sbjct: 804  ILVFAVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAINQKIQLYKWVLRDDGTHELQSEC 863

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI+DDD
Sbjct: 864  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIVDDD 923

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAEN+FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 924  IYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 983

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKVIKGVGGL+HEQWRSFNNEKKTV+
Sbjct: 984  IPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGGLSHEQWRSFNNEKKTVE 1043

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDL+R++MDEISK ++VSVEELCKRVEELTRLH
Sbjct: 1044 ARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEELTRLH 1089


>gi|312283457|dbj|BAJ34594.1| unnamed protein product [Thellungiella halophila]
          Length = 1088

 Score = 1434 bits (3713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 695/765 (90%), Positives = 737/765 (96%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNL PDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGA+KDGSLRIVR
Sbjct: 324  QLVKLNLHPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETR+LAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRVLAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+EW +P G++VNVATANASQVLL
Sbjct: 444  FLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG+NP+YSQ+A+VGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGKLTEVQHAVLEYEVSCLDINPIGDNPNYSQLASVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+  TG+L DRKKV
Sbjct: 564  SLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTGQLKDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKN THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQEQ+RTF ICSL NQ+ AEESEM
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICSLGNQTNAEESEM 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLDDQ+FEF+STYPLD FEYGCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDDQSFEFVSTYPLDAFEYGCSILSCSFADDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVEDGKLQLIAEKETKG+VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEDGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQI
Sbjct: 924  YLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLP EQY+FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVNGVIGVIASLPQEQYMFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 1044 RNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088


>gi|350537001|ref|NP_001234275.1| DNA damage-binding protein 1 [Solanum lycopersicum]
 gi|350539125|ref|NP_001233864.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|55976440|sp|Q6QNU4.1|DDB1_SOLLC RecName: Full=DNA damage-binding protein 1; AltName: Full=High
            pigmentation protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|38455768|gb|AAR20885.1| UV damaged DNA binding protein 1 [Solanum lycopersicum]
 gi|42602165|gb|AAS21683.1| UV-damaged DNA binding protein 1 [Solanum lycopersicum]
          Length = 1090

 Score = 1431 bits (3705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/767 (91%), Positives = 740/767 (96%), Gaps = 2/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRS+TDDP+DTFLVVSFISETR+LAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSSTSR+L+NEW +P GYSVNVATANA+QVLL
Sbjct: 444  FNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCLDINPIGENP+YS IAAVGMWTDISVRI+
Sbjct: 504  ATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIGENPNYSNIAAVGMWTDISVRIY 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE LGGEIIPRSVL+C+FEGISYLLCALGDGHLLNF+L+M TGELTDRKKV
Sbjct: 564  SLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCALGDGHLLNFVLSMSTGELTDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN AAFPD
Sbjct: 624  SLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTID+IQKLHIRSIPLGEH RRI HQEQ+RTFA+CS+K  QS A++ E
Sbjct: 684  SLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVKYTQSNADDPE 743

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTYPLD FEYGCSILSCSFSDDSNVYYC+GTAYV+PEENEPTKGR
Sbjct: 744  MHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIGTAYVMPEENEPTKGR 803

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD-GTRELQSE 547
            ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW  R+D G+RELQ+E
Sbjct: 804  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTE 863

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
            CGHHGHILALYVQTRGDFIVVGDLMKSISLLI+KHEEGAIEERARDYNANWMSAVEILDD
Sbjct: 864  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDD 923

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            DIYLGAENNFNLFTVRKNSEGATDEER RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG
Sbjct: 924  DIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 983

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            QIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQTNLRKVIKGVGGL+HEQWRSF NEKKTV
Sbjct: 984  QIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTV 1043

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DAKNFLDGDLIESFLDLSR RM+EISK M+V VEEL KRVEELTRLH
Sbjct: 1044 DAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1090


>gi|55976392|sp|Q6E7D1.1|DDB1_SOLCE RecName: Full=DNA damage-binding protein 1; AltName: Full=UV-damaged
            DNA-binding protein 1
 gi|49484911|gb|AAT66742.1| UV-damaged DNA binding protein 1 [Solanum cheesmaniae]
          Length = 1095

 Score = 1431 bits (3704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/767 (91%), Positives = 740/767 (96%), Gaps = 2/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 329  QLVKLNLQPDTKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 388

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRS+TDDP+DTFLVVSFISETR+LAMNLEDELEETEIEG
Sbjct: 389  NGIGINEQASVELQGIKGMWSLRSATDDPYDTFLVVSFISETRVLAMNLEDELEETEIEG 448

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSSTSR+L+NEW +P GYSVNVATANA+QVLL
Sbjct: 449  FNSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTSRDLKNEWFAPVGYSVNVATANATQVLL 508

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG+L EVK+A+L+Y+ISCLDINPIGENP+YS IAAVGMWTDISVRI+
Sbjct: 509  ATGGGHLVYLEIGDGVLNEVKYAKLDYDISCLDINPIGENPNYSNIAAVGMWTDISVRIY 568

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE LGGEIIPRSVL+C+FEGISYLLCALGDGHLLNF+L+M TGELTDRKKV
Sbjct: 569  SLPDLNLITKEQLGGEIIPRSVLMCSFEGISYLLCALGDGHLLNFVLSMSTGELTDRKKV 628

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN AAFPD
Sbjct: 629  SLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNVAAFPD 688

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGELTIGTID+IQKLHIRSIPLGEH RRI HQEQ+RTFA+CS+K  QS A++ E
Sbjct: 689  SLAIAKEGELTIGTIDEIQKLHIRSIPLGEHARRISHQEQTRTFALCSVKYTQSNADDPE 748

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHFVRLLDDQTFEFISTYPLD FEYGCSILSCSFSDDSNVYYC+GTAYV+PEENEPTKGR
Sbjct: 749  MHFVRLLDDQTFEFISTYPLDQFEYGCSILSCSFSDDSNVYYCIGTAYVMPEENEPTKGR 808

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD-GTRELQSE 547
            ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW  R+D G+RELQ+E
Sbjct: 809  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWASREDGGSRELQTE 868

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
            CGHHGHILALYVQTRGDFIVVGDLMKSISLLI+KHEEGAIEERARDYNANWMSAVEILDD
Sbjct: 869  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIFKHEEGAIEERARDYNANWMSAVEILDD 928

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            DIYLGAENNFNLFTVRKNSEGATDEER RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG
Sbjct: 929  DIYLGAENNFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 988

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            QIPTVIFGTVNGVIGVIASLPH+QYLFLEKLQTNLRKVIKGVGGL+HEQWRSF NEKKTV
Sbjct: 989  QIPTVIFGTVNGVIGVIASLPHDQYLFLEKLQTNLRKVIKGVGGLSHEQWRSFYNEKKTV 1048

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DAKNFLDGDLIESFLDLSR RM+EISK M+V VEEL KRVEELTRLH
Sbjct: 1049 DAKNFLDGDLIESFLDLSRNRMEEISKAMSVPVEELMKRVEELTRLH 1095


>gi|186511557|ref|NP_001118940.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|332657118|gb|AEE82518.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1067

 Score = 1431 bits (3703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/765 (90%), Positives = 737/765 (96%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLERQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 303  QLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVR 362

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 363  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEG 422

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+EW +P G++VNVATANASQVLL
Sbjct: 423  FLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQVLL 482

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF
Sbjct: 483  ATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIF 542

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF ++  TG+L DRKKV
Sbjct: 543  SLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTGQLKDRKKV 602

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 603  SLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 662

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQEQ+RTF ICSL NQS +EESEM
Sbjct: 663  SLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICSLGNQSNSEESEM 722

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 723  HFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPTKGRI 782

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 783  LVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 842

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 843  HHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDI 902

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQI
Sbjct: 903  YLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQI 962

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 963  PTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1022

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 1023 RNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1067


>gi|297809743|ref|XP_002872755.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
 gi|297318592|gb|EFH49014.1| UV-damaged DNA-binding protein 1A [Arabidopsis lyrata subsp. lyrata]
          Length = 1088

 Score = 1431 bits (3703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/765 (90%), Positives = 737/765 (96%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLERQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 324  QLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+EW +P G++VNVATANASQVLL
Sbjct: 444  FLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG+NP+YSQ+A+VGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDNPNYSQLASVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+  TG+L DRKKV
Sbjct: 564  SLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTTTGQLKDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQEQ+RTF ICSL NQS AEESEM
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICSLGNQSNAEESEM 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQI
Sbjct: 924  YLGAENNFNLVTVKKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 1044 RNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088


>gi|15235577|ref|NP_192451.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
 gi|55976605|sp|Q9M0V3.1|DDB1A_ARATH RecName: Full=DNA damage-binding protein 1a; AltName: Full=UV-damaged
            DNA-binding protein 1a; Short=DDB1a
 gi|7267302|emb|CAB81084.1| UV-damaged DNA binding factor-like protein [Arabidopsis thaliana]
 gi|25054828|gb|AAN71904.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
 gi|332657117|gb|AEE82517.1| DNA damage-binding protein 1a [Arabidopsis thaliana]
          Length = 1088

 Score = 1429 bits (3700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/765 (90%), Positives = 737/765 (96%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNL PDAKGSYVEVLERY+NLGPIVDFCVVDLERQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 324  QLVKLNLHPDAKGSYVEVLERYINLGPIVDFCVVDLERQGQGQVVTCSGAFKDGSLRVVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+EW +P G++VNVATANASQVLL
Sbjct: 444  FLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRDEWHAPAGFTVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF ++  TG+L DRKKV
Sbjct: 564  SLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQMDTTTGQLKDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQEQ+RTF ICSL NQS +EESEM
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQTRTFGICSLGNQSNSEESEM 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGAIEERARDYNANWMSAVEILDDDI
Sbjct: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQI
Sbjct: 924  YLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 1044 RNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRVEELTRLH 1088


>gi|449435512|ref|XP_004135539.1| PREDICTED: DNA damage-binding protein 1-like [Cucumis sativus]
          Length = 1093

 Score = 1409 bits (3647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/770 (89%), Positives = 734/770 (95%), Gaps = 5/770 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 324  QLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA++NQLVQVTS SVRLVSST+REL NEW +P  YS+NVATANASQVLL
Sbjct: 444  FNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELLNEWNAPSNYSINVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGG LV+LEI DG+L E KH QLE+EISCLDINPIG+NP+ SQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPIGDNPNCSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG----ELTD 305
            SLPDLNL+TKE LGGEIIPRSVLLC FEGISYLLCALGDGHLLNF+LN  +     EL D
Sbjct: 564  SLPDLNLLTKEQLGGEIIPRSVLLCTFEGISYLLCALGDGHLLNFILNTNSNSNSCELMD 623

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            RKKVSLGTQPITLRTFSSKN THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA
Sbjct: 624  RKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 683

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCA 424
            AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSL+ NQS  
Sbjct: 684  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLRYNQSGT 743

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 484
            E++EMHF+RLLDDQTFE ISTY LDT+EYGCSILSCSFSDD+NVYYCVGTAYV+PEENEP
Sbjct: 744  EDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSDDNNVYYCVGTAYVMPEENEP 803

Query: 485  TKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
            TKGRILVF+VE+GKLQLIAEKETKG+VYSLNAFNGKLLAAINQKIQLYKW LRDDGTREL
Sbjct: 804  TKGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWTLRDDGTREL 863

Query: 545  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
            QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI
Sbjct: 864  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 923

Query: 605  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            LDDDIYLGAEN FNLFTVRKNSEGATDEER RLEVVGEYHLGEFVNRF+HGSLVMRLPDS
Sbjct: 924  LDDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFQHGSLVMRLPDS 983

Query: 665  DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
            DVGQIPTVIFG+VNGVIGVIASLPH+QY+FLE+LQ+NLRKVIKGVGGL+HEQWRSFNNEK
Sbjct: 984  DVGQIPTVIFGSVNGVIGVIASLPHDQYVFLERLQSNLRKVIKGVGGLSHEQWRSFNNEK 1043

Query: 725  KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +T +AKNFLDGDLIESFLDL+R++M+EIS+ M+VS EELCKRVEELTRLH
Sbjct: 1044 RTAEAKNFLDGDLIESFLDLNRSKMEEISRAMSVSAEELCKRVEELTRLH 1093


>gi|357519461|ref|XP_003630019.1| DNA damage-binding protein [Medicago truncatula]
 gi|355524041|gb|AET04495.1| DNA damage-binding protein [Medicago truncatula]
          Length = 1171

 Score = 1406 bits (3640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 706/848 (83%), Positives = 741/848 (87%), Gaps = 83/848 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPD KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 324  QLIKLNLQPDPKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 383

Query: 70   NGIGINEQAS------------------------------VELQGIKGMWSLRSSTDDPF 99
            NGIGINEQ S                              +ELQGIKGMWSLRSSTDDPF
Sbjct: 384  NGIGINEQVSPLFSCLSVGSFTQDTTKRKRFFFFLIINNTLELQGIKGMWSLRSSTDDPF 443

Query: 100  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS 159
            DTFLVVSFISETRILAMNLEDELEETEIEGFCSQ QTLFCHDA++NQLVQVTS SVRLVS
Sbjct: 444  DTFLVVSFISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVRLVS 503

Query: 160  STSRELRNEWKSPPGYSVNVATANASQ--------------------------------- 186
            S++REL NEW +P  YSVNVATANA+Q                                 
Sbjct: 504  SSTRELLNEWHAPSDYSVNVATANATQSQNHFIFQISSPSLSHGNIMICLSCKDVDNWSS 563

Query: 187  -------------------VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIG 227
                               VLLATGGGHLVYLEIGDGIL EVKHAQLEYEISCLDINPIG
Sbjct: 564  TSSSLSLIYRVLFLLVAASVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPIG 623

Query: 228  ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG 287
            ENP+ SQ+AAVGMWTDISVR+FSLP+LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG
Sbjct: 624  ENPNQSQLAAVGMWTDISVRLFSLPELNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG 683

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 347
            DGHLLNF+LN  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL
Sbjct: 684  DGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 743

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
            YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR+IPLGEH RRICHQ
Sbjct: 744  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQ 803

Query: 408  EQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 466
            EQ+RTFAICSLK N + AEESEMHFVRLLDDQTF+FIS YPLDT+EYGC I+SCSFSDD+
Sbjct: 804  EQTRTFAICSLKYNSASAEESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDDN 863

Query: 467  NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
            NVYYCVGTAYVLPEENEPTKGRILVF VE+GKLQL+AEKETKGAVY LNAFNGKLLAAIN
Sbjct: 864  NVYYCVGTAYVLPEENEPTKGRILVFSVEEGKLQLVAEKETKGAVYCLNAFNGKLLAAIN 923

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
            QKIQLYKW+LR+DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
Sbjct: 924  QKIQLYKWVLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 983

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
            IEERARDYNANWMSAVEILDDD+YLGAEN+FNLFTVRKNSEGATDEERGRLEV GEYHLG
Sbjct: 984  IEERARDYNANWMSAVEILDDDVYLGAENSFNLFTVRKNSEGATDEERGRLEVAGEYHLG 1043

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 706
            EF+NRFRHGSLVMRLPDSDVGQIPTVIFGT+NGVIGVIASLPHEQY+FLEKLQ+NLRKVI
Sbjct: 1044 EFINRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVI 1103

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
            KGVGGL+HEQWRSFNNEKKTV+A+NFLDGDLIESFLDL R++MDEISK M VSVEEL KR
Sbjct: 1104 KGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLKRSKMDEISKAMEVSVEELAKR 1163

Query: 767  VEELTRLH 774
            VEELTRLH
Sbjct: 1164 VEELTRLH 1171


>gi|297799958|ref|XP_002867863.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297313699|gb|EFH44122.1| hypothetical protein ARALYDRAFT_492777 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1088

 Score = 1404 bits (3633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/765 (88%), Positives = 729/765 (95%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDA GSYVE+LE+YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKLNLQPDATGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMN+EDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELRN+W +P G++VNVATANASQVLL
Sbjct: 444  FLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFAVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPIG+NP+YSQ+AAVG+WTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNPNYSQLAAVGLWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+  +G+L DRKKV
Sbjct: 564  VLPDLTLITKEQLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSSGKLRDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSK+ THVFAASDRP VIYS+NKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICHQEQ+RTFAIC L+NQ  AEESEM
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAICCLRNQPSAEESEM 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD Q+FEF+STYPLD FEYGCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDAQSFEFLSTYPLDAFEYGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM+AVEILDDDI
Sbjct: 864  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILDDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLGA+N FNLFTV+KN+EGATDEER R+EVVGEYH+GEFVNRFRHGSLVMRLPDS++GQI
Sbjct: 924  YLGADNCFNLFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMRLPDSEIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            K++LDGDLIESFLDLSR +M+EISK M+V VEELCKRVEELTRLH
Sbjct: 1044 KSYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088


>gi|2911067|emb|CAA17529.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
 gi|7268907|emb|CAB79110.1| UV-damaged DNA-binding protein-like [Arabidopsis thaliana]
          Length = 1102

 Score = 1385 bits (3584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/765 (87%), Positives = 723/765 (94%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVE+LE+YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 338  QLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 397

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMN+EDELEETEIEG
Sbjct: 398  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEG 457

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELRN+W +P G+SVNVATANASQVLL
Sbjct: 458  FLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQVLL 517

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF
Sbjct: 518  ATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIF 577

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+   G+L DRKKV
Sbjct: 578  VLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCGKLRDRKKV 637

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGT+PITLRTFSSK+ THVFAASDRP VIYS+NKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 638  SLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPD 697

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICHQEQ+RTFAI  L+N+  AEESE 
Sbjct: 698  SLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLRNEPSAEESES 757

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD Q+FEF+S+YPLD FE GCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 758  HFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRI 817

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLA+INQKIQLYKWMLRDDGTRELQSECG
Sbjct: 818  LVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSECG 877

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFI VGDLMKSISLLIYKHEEGAIEERARDYNANWM+AVEIL+DDI
Sbjct: 878  HHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDI 937

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLG +N FN+FTV+KN+EGATDEER R+EVVGEYH+GEFVNRFRHGSLVM+LPDSD+GQI
Sbjct: 938  YLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQI 997

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 998  PTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1057

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            K +LDGDLIESFLDLSR +M+EISK M+V VEELCKRVEELTRLH
Sbjct: 1058 KGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1102


>gi|15233515|ref|NP_193842.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
 gi|73620956|sp|O49552.2|DDB1B_ARATH RecName: Full=DNA damage-binding protein 1b; AltName: Full=UV-damaged
            DNA-binding protein 1b; Short=DDB1b
 gi|110739453|dbj|BAF01636.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
 gi|332659001|gb|AEE84401.1| DNA damage-binding protein 1b [Arabidopsis thaliana]
          Length = 1088

 Score = 1383 bits (3580), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/765 (87%), Positives = 723/765 (94%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVE+LE+YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMN+EDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELRN+W +P G+SVNVATANASQVLL
Sbjct: 444  FLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+   G+L DRKKV
Sbjct: 564  VLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCGKLRDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGT+PITLRTFSSK+ THVFAASDRP VIYS+NKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICHQEQ+RTFAI  L+N+  AEESE 
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLRNEPSAEESES 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD Q+FEF+S+YPLD FE GCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLA+INQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFI VGDLMKSISLLIYKHEEGAIEERARDYNANWM+AVEIL+DDI
Sbjct: 864  HHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMTAVEILNDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLG +N FN+FTV+KN+EGATDEER R+EVVGEYH+GEFVNRFRHGSLVM+LPDSD+GQI
Sbjct: 924  YLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            K +LDGDLIESFLDLSR +M+EISK M+V VEELCKRVEELTRLH
Sbjct: 1044 KGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088


>gi|62318656|dbj|BAD95136.1| UV-damaged DNA-binding protein- like [Arabidopsis thaliana]
          Length = 1088

 Score = 1382 bits (3576), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 669/765 (87%), Positives = 723/765 (94%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLNLQPDAKGSYVE+LE+YVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKLNLQPDAKGSYVEILEKYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSFISETRILAMN+EDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSFISETRILAMNIEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCHDA+YNQLVQVTS SVRLVSST+RELRN+W +P G+SVNVATANASQVLL
Sbjct: 444  FLSEVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRNKWDAPAGFSVNVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKH  LEYE+SCLDINPIG+NP+YSQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTEVKHVLLEYEVSCLDINPIGDNPNYSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LPDL LITKE LGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF L+   G+L DRKKV
Sbjct: 564  VLPDLTLITKEELGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFQLDTSCGKLRDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGT+PITLRTFSSK+ THVFAASDRP VIYS+NKKLLYSNV+LKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTRPITLRTFSSKSATHVFAASDRPAVIYSNNKKLLYSNVSLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIA+EGELTIGTIDDIQKLHIR+IP+GEH RRICHQEQ+RTFAI  L+N+  AEESE 
Sbjct: 684  SLAIAREGELTIGTIDDIQKLHIRTIPIGEHARRICHQEQTRTFAISCLRNEPSAEESES 743

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD Q+FEF+S+YPLD FE GCSILSCSF+DD NVYYCVGTAYVLPEENEPTKGRI
Sbjct: 744  HFVRLLDAQSFEFLSSYPLDAFECGCSILSCSFTDDKNVYYCVGTAYVLPEENEPTKGRI 803

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVFIVE+G+LQLI EKETKGAVYSLNAFNGKLLA+INQKIQLYKWMLRDDGTRELQSECG
Sbjct: 804  LVFIVEEGRLQLITEKETKGAVYSLNAFNGKLLASINQKIQLYKWMLRDDGTRELQSECG 863

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALYVQTRGDFI VGDLMKSISLLIYKHEEGAIEERARDYNANWM+AVEIL+DDI
Sbjct: 864  HHGHILALYVQTRGDFIAVGDLMKSISLLIYKHEEGAIEERARDYNANWMAAVEILNDDI 923

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            YLG +N FN+FTV+KN+EGATDEER R+EVVGEYH+GEFVNRFRHGSLVM+LPDSD+GQI
Sbjct: 924  YLGTDNCFNIFTVKKNNEGATDEERARMEVVGEYHIGEFVNRFRHGSLVMKLPDSDIGQI 983

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGTV+G+IGVIASLP EQY FLEKLQT+LRKVIKGVGGL+HEQWRSFNNEK+T +A
Sbjct: 984  PTVIFGTVSGMIGVIASLPQEQYAFLEKLQTSLRKVIKGVGGLSHEQWRSFNNEKRTAEA 1043

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            K +LDGDLIESFLDLSR +M+EISK M+V VEELCKRVEELTRLH
Sbjct: 1044 KGYLDGDLIESFLDLSRGKMEEISKGMDVQVEELCKRVEELTRLH 1088


>gi|297740793|emb|CBI30975.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score = 1372 bits (3551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/766 (89%), Positives = 704/766 (91%), Gaps = 47/766 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIK++LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKIHLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLRSSTDDP DTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRSSTDDPHDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            FCSQ QTLFCHDA+Y+QLVQVTS SVRLV STSRELRNEWK+P GYSVNVATANA+QVLL
Sbjct: 444  FCSQVQTLFCHDAVYDQLVQVTSSSVRLVGSTSRELRNEWKAPSGYSVNVATANATQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEIGDG LTEVKHAQLEY+ISCLDINPIGENP++SQ+AAVGMWTDISVRIF
Sbjct: 504  ATGGGHLVYLEIGDGTLTEVKHAQLEYDISCLDINPIGENPNFSQLAAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDLNLITKE+LGGEIIPRSVLLC+FEGI YLLCALGDGHLLNFLLNM TGELTDRKKV
Sbjct: 564  SLPDLNLITKEYLGGEIIPRSVLLCSFEGIPYLLCALGDGHLLNFLLNMSTGELTDRKKV 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD
Sbjct: 624  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEG+LTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSLK NQS  E+SE
Sbjct: 684  SLAIAKEGDLTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLKYNQSSTEDSE 743

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
            MHF+RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR
Sbjct: 744  MHFIRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 803

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 
Sbjct: 804  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSES 863

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD
Sbjct: 864  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 923

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IYLGAENNFN+FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ
Sbjct: 924  IYLGAENNFNIFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 983

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGTVNGVIGVIASLPH+QY+FLEKLQ NLRKVIKG                    
Sbjct: 984  IPTVIFGTVNGVIGVIASLPHDQYVFLEKLQANLRKVIKG-------------------- 1023

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
                                       M VSVEELCKRVEELTRLH
Sbjct: 1024 --------------------------AMAVSVEELCKRVEELTRLH 1043


>gi|110741229|dbj|BAF02165.1| UV-damaged DNA binding factor - like protein [Arabidopsis thaliana]
          Length = 727

 Score = 1362 bits (3524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/727 (90%), Positives = 700/727 (96%)

Query: 48  QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSF 107
           QGQGQVVTCSGA+KDGSLR+VRNGIGINEQASVELQGIKGMWSL+SS D+ FDTFLVVSF
Sbjct: 1   QGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLKSSIDEAFDTFLVVSF 60

Query: 108 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN 167
           ISETRILAMNLEDELEETEIEGF SQ QTLFCHDA+YNQLVQVTS SVRLVSST+RELR+
Sbjct: 61  ISETRILAMNLEDELEETEIEGFLSQVQTLFCHDAVYNQLVQVTSNSVRLVSSTTRELRD 120

Query: 168 EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIG 227
           EW +P G++VNVATANASQVLLATGGGHLVYLEIGDG LTEV+HA LEYE+SCLDINPIG
Sbjct: 121 EWHAPAGFTVNVATANASQVLLATGGGHLVYLEIGDGKLTEVQHALLEYEVSCLDINPIG 180

Query: 228 ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG 287
           +NP+YSQ+AAVGMWTDISVRIFSLP+L LITKE LGGEIIPRSVLLCAFEGISYLLCALG
Sbjct: 181 DNPNYSQLAAVGMWTDISVRIFSLPELTLITKEQLGGEIIPRSVLLCAFEGISYLLCALG 240

Query: 288 DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 347
           DGHLLNF ++  TG+L DRKKVSLGTQPITLRTFSSK+ THVFAASDRPTVIYSSNKKLL
Sbjct: 241 DGHLLNFQMDTTTGQLKDRKKVSLGTQPITLRTFSSKSATHVFAASDRPTVIYSSNKKLL 300

Query: 348 YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
           YSNVNLKEVSHMCPFNSAAFPDSLAIA+EGELTIGTIDDIQKLHIR+IPLGEH RRICHQ
Sbjct: 301 YSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQ 360

Query: 408 EQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 467
           EQ+RTF ICSL NQS +EESEMHFVRLLDDQTFEF+STYPLD+FEYGCSILSCSF++D N
Sbjct: 361 EQTRTFGICSLGNQSNSEESEMHFVRLLDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKN 420

Query: 468 VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
           VYYCVGTAYVLPEENEPTKGRILVFIVEDG+LQLIAEKETKGAVYSLNAFNGKLLAAINQ
Sbjct: 421 VYYCVGTAYVLPEENEPTKGRILVFIVEDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQ 480

Query: 528 KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
           KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL+YKHEEGAI
Sbjct: 481 KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEGAI 540

Query: 588 EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
           EERARDYNANWMSAVEILDDDIYLGAENNFNL TV+KNSEGATDEERGRLEVVGEYHLGE
Sbjct: 541 EERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKKNSEGATDEERGRLEVVGEYHLGE 600

Query: 648 FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK 707
           FVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVIASLP EQY FLEKLQ++LRKVIK
Sbjct: 601 FVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVIASLPQEQYTFLEKLQSSLRKVIK 660

Query: 708 GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
           GVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDLSR +M++ISK+MNV VEELCKRV
Sbjct: 661 GVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDLSRNKMEDISKSMNVQVEELCKRV 720

Query: 768 EELTRLH 774
           EELTRLH
Sbjct: 721 EELTRLH 727


>gi|413946716|gb|AFW79365.1| hypothetical protein ZEAMMB73_562969 [Zea mays]
          Length = 1089

 Score = 1313 bits (3397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/765 (82%), Positives = 700/765 (91%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ DA GS+VE+LERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 325  QLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DPFD +LVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSINDPFDMYLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +QTQTLFC +AI + L+QVT+ SVRLVS TSREL N+W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVNQWNAPAGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKHAQLE+EISCLD+NPIGENP YS +AAVGMWTDISVRIF
Sbjct: 505  ATGGGHLVYLEIRDAKLVEVKHAQLEHEISCLDLNPIGENPQYSSLAAVGMWTDISVRIF 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDG+L +FLLN  TGELTDRKKV
Sbjct: 565  SLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGNLFSFLLNASTGELTDRKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AAFPD
Sbjct: 625  TLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQSRT A CS K     EESE 
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSFKYNQSVEESET 744

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            H +RLLD QTFE +  YPLD +E GCSI+SCSF+DDSNVYYCVGTAYV+PEENEPTKGRI
Sbjct: 745  HLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVIPEENEPTKGRI 804

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWM R+DG+ ELQSECG
Sbjct: 805  LVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECG 864

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEERARDYNANWM+AVE+LDD++
Sbjct: 865  HHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANWMTAVEMLDDEV 924

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            Y+GAEN++NLFTVRKNS+ ATD+ER RLEVVGEYHLGEFVNRFRHGSLVMRLPDSD+GQI
Sbjct: 925  YVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHLGEFVNRFRHGSLVMRLPDSDIGQI 984

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K IKGVG L+HEQWRSF+N+KKT +A
Sbjct: 985  PTVIFGTINGVIGIIASLPHDQYIFLEKLQSTLVKYIKGVGNLSHEQWRSFHNDKKTAEA 1044

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR++M+E+SK M V VEEL KRVEELTRLH
Sbjct: 1045 RNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSKRVEELTRLH 1089


>gi|115465791|ref|NP_001056495.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|48475231|gb|AAT44300.1| putative DNA damage binding protein 1 [Oryza sativa Japonica Group]
 gi|113580046|dbj|BAF18409.1| Os05g0592400 [Oryza sativa Japonica Group]
 gi|215694552|dbj|BAG89545.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632766|gb|EEE64898.1| hypothetical protein OsJ_19757 [Oryza sativa Japonica Group]
          Length = 1090

 Score = 1309 bits (3387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/766 (83%), Positives = 702/766 (91%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 325  QLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DP+D +LVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +QTQTLFC +AI + L+QVT+ SVRLVS TSREL ++W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKH QLE+EISC+D+NPIGENP YS +AAVGMWTDISVRI 
Sbjct: 505  ATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIGENPQYSSLAAVGMWTDISVRIL 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDGHL +FLLN  TGELTDRKKV
Sbjct: 565  SLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTGELTDRKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AA PD
Sbjct: 625  SLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQSRT A CS K NQ+  EESE
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSFKHNQTSIEESE 744

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
             HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSDD+NVYYCVGTAYVLPEENEP+KGR
Sbjct: 745  THFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGR 804

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR+DG+ ELQSEC
Sbjct: 805  ILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSEC 864

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEE ARDYNANWMSAVE+LDD+
Sbjct: 865  GHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDE 924

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IY+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYHLGEFVNR RHGSLVMRLPDS++GQ
Sbjct: 925  IYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQ 984

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K IKGVG L+HEQWRSF+N+KKT +
Sbjct: 985  IPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSE 1044

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDLSR +M+E++K M V VEEL KRVEELTRLH
Sbjct: 1045 ARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1090


>gi|12082087|dbj|BAB20761.1| UV-damaged DNA binding protein [Oryza sativa Japonica Group]
          Length = 1090

 Score = 1305 bits (3377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/766 (82%), Positives = 700/766 (91%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 325  QLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DP+D +LVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +QTQTLFC +AI + L+QVT+ SVRLVS TSREL ++W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKH QLE+EISC+D+NPIGENP YS +AAVGMWTDISVRI 
Sbjct: 505  ATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIGENPQYSSLAAVGMWTDISVRIL 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            S PDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDGHL +FLLN  TGELTDRKKV
Sbjct: 565  SFPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTGELTDRKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AA PD
Sbjct: 625  SLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL    RRICHQEQSRT A CS K NQ+  EESE
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLDHQTRRICHQEQSRTLAFCSFKHNQTSIEESE 744

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
             HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSDD+NVYYCVGTAYVLPEENEP+KGR
Sbjct: 745  THFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGR 804

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR+DG+ ELQSEC
Sbjct: 805  ILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSEC 864

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEE ARDYNANWMSAVE+LDD+
Sbjct: 865  GHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDE 924

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IY+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYHLGEF NRFRHGSLVMRLPDS++GQ
Sbjct: 925  IYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFGNRFRHGSLVMRLPDSEMGQ 984

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K IKGVG L+HEQWRSF+N+KKT +
Sbjct: 985  IPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSE 1044

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDLSR +M+E++K M V VEEL KRVEELTRLH
Sbjct: 1045 ARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1090


>gi|357132340|ref|XP_003567788.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1090

 Score = 1300 bits (3364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/766 (81%), Positives = 703/766 (91%), Gaps = 1/766 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ DA GS+VEVLERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGS+R+VR
Sbjct: 325  QLVKLNLQADATGSFVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSIRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DP+DTFLVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSFNDPYDTFLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +Q QTLFC +AI + L+QVT+ SVRLVS  SREL + W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQIQTLFCQNAISDLLIQVTANSVRLVSCASRELVDHWNAPDGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKHAQLE+EISC+D+NPIGENP YS +AA+GMWTDISV + 
Sbjct: 505  ATGGGHLVYLEIRDAKLVEVKHAQLEHEISCVDLNPIGENPQYSSLAAIGMWTDISVSLL 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDGHL +FLLN+ TGELTD+KKV
Sbjct: 565  SLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNVSTGELTDKKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AAFPD
Sbjct: 625  SLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESE 428
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQSRT A CS K N +  EESE
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSFKYNPNSMEESE 744

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGR 488
             HF+RLLD QTFEF+ST+PLD +E GCS++SCSFSDD+N YYCVGTAYVLPEENEPTKGR
Sbjct: 745  AHFIRLLDHQTFEFLSTHPLDQYECGCSMISCSFSDDNNFYYCVGTAYVLPEENEPTKGR 804

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            ILVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWM R+DG+ ELQSEC
Sbjct: 805  ILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQSEC 864

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            GHHGHILAL+ QTRGDFIVVGDLMKSISLL+YKHEE AIEE ARDYNANWM+AVE++DDD
Sbjct: 865  GHHGHILALFTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDD 924

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            IY+GAEN++NLFTVRKNS+ ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD+++GQ
Sbjct: 925  IYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDTEMGQ 984

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            IPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K IKGVG L+H+QWRSF+NEKKT +
Sbjct: 985  IPTVIFGTINGVIGIIASLPHDQYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAE 1044

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            A+NFLDGDLIESFLDL+R++M+E+SK M VSVE L KRVEELTRLH
Sbjct: 1045 ARNFLDGDLIESFLDLNRSKMEEVSKGMGVSVENLSKRVEELTRLH 1090


>gi|168066745|ref|XP_001785293.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663100|gb|EDQ49884.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1090

 Score = 1299 bits (3362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/767 (80%), Positives = 690/767 (89%), Gaps = 2/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+LN Q DAK SYVEVLE YVNLGPIVD CVVDLERQGQGQVVTCSGA+KDGSLRIVR
Sbjct: 324  QLIRLNHQADAKNSYVEVLESYVNLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS ELQGIKGMWSLR+S+ D +DTFLVVSFISETRILAMN +DELEETEI+G
Sbjct: 384  NGIGINEQASAELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMNTDDELEETEIDG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFC++A+++QLVQVT+GS+RLV + +R    EWK+P   ++NVATANASQVLL
Sbjct: 444  FDSEAQTLFCYNAVHDQLVQVTAGSLRLVDAKTRRQLTEWKAPAPMTINVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGG+LVY+EIG G L EV H QLEYEISCLDINP+G+NP  S + AVGMWTDIS+RIF
Sbjct: 504  ATGGGNLVYIEIGQGTLVEVAHVQLEYEISCLDINPVGDNPERSNLVAVGMWTDISIRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L LITKE LGGEIIPRSVL C+F+GI+YLLCALGDGHL NF LN  TGEL+DRKK+
Sbjct: 564  ALPSLTLITKEMLGGEIIPRSVLFCSFDGIAYLLCALGDGHLFNFTLNPATGELSDRKKI 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI LRTF SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV+HMCPFNSA+FPD
Sbjct: 624  SLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEES 427
            SLAI KEGELTIGTID+IQKLHIR++PLGEHPRRI HQEQSRTFAICS K    S  E+ 
Sbjct: 684  SLAIGKEGELTIGTIDEIQKLHIRTVPLGEHPRRIAHQEQSRTFAICSAKYAPGSNGEDM 743

Query: 428  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
            E H+VRL++DQTFE IS +PLD +E GCSI++CSF+DDSNVYYCVGTAY LPEE+EP+KG
Sbjct: 744  ETHYVRLIEDQTFEIISGFPLDPYENGCSIITCSFTDDSNVYYCVGTAYALPEESEPSKG 803

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            RILVF VEDGK+QL+AEKE KGAVY+LNAFNGKLLA INQKI LYKW LRDDGTRELQ E
Sbjct: 804  RILVFSVEDGKIQLVAEKEVKGAVYNLNAFNGKLLAGINQKIALYKWTLRDDGTRELQYE 863

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
              HHGHILALYVQ+RGDFIVVGDLMKSISLLIYK EEGAIEERARDYNANWM+AVEILDD
Sbjct: 864  SSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDD 923

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            D YLGAEN+FNLFTVRKN++ ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS+  
Sbjct: 924  DTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEAS 983

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            QIPTVIFGTVNGVIGVIASLP +Q+LFL+KLQ  L KVIKGVGGL+HEQWRSF+NE+KTV
Sbjct: 984  QIPTVIFGTVNGVIGVIASLPQDQFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTV 1043

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DA+NFLDGDLIESFLDLSR +M+EI+ ++ VSVEEL K VEELTRLH
Sbjct: 1044 DARNFLDGDLIESFLDLSRNKMEEIATSLEVSVEELHKAVEELTRLH 1090


>gi|302788810|ref|XP_002976174.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
 gi|300156450|gb|EFJ23079.1| hypothetical protein SELMODRAFT_151061 [Selaginella moellendorffii]
          Length = 1089

 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/767 (79%), Positives = 688/767 (89%), Gaps = 3/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN Q D++ SYVEVLE +VNLGPIVD CVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS ELQGIKGMWSLR+++ D FD FLVVSFISETRILAMN++DELEETEIEG
Sbjct: 384  NGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCH+AI++Q++QVTS S+RLV +TSR    EW++P G ++NVATANASQVLL
Sbjct: 444  FDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEWRTPSGVAINVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGG+LVY+EIG G LTEVKH QL+ EISCLDINPIG +P  S IAAVGMWTDISV++F
Sbjct: 504  ATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPIGTDPDRSNIAAVGMWTDISVQVF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L ++ KE LGGEIIPRSVL+CAFEG+SYLLCALGDGHL NFL++  TG+L+DRKK+
Sbjct: 564  SLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCALGDGHLFNFLIDTSTGQLSDRKKI 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI LRTF SKN THVFAASDRPTVIYSSNKKLLYSNVNLKEV+HMCPFNSA+FPD
Sbjct: 624  SLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEES 427
            SLAI KEGELTIGTIDDIQKLHIR++ LGEHPRRICHQEQ+RTF +C+ +  +    E+ 
Sbjct: 684  SLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICHQEQTRTFGLCTARFYSNPNGEDH 743

Query: 428  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
            E HFV+LLDDQTFE + +Y LDTFE GC+I++CSF+DD   YYCVGTAY LPEENEP+KG
Sbjct: 744  ESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTDDPATYYCVGTAYALPEENEPSKG 803

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            RIL+F VEDGK QL+ EKETKGAVY+LNAFNGKLLA INQKIQLYKW  R D TRELQSE
Sbjct: 804  RILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAGINQKIQLYKWTQR-DSTRELQSE 862

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
            CGHHGHILALYVQ+RGDFIVVGDLMKSISLL+YK EEGAIEERARDYNANWM+AVEILDD
Sbjct: 863  CGHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDD 922

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            DIYLGAEN+FNLFTVRKNS+ ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD++  
Sbjct: 923  DIYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDNETS 982

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            QIPTVIFGTVNGVIGV+ASL  EQ+ FL++LQ  L KVIKGVGGL+HEQWRSF++E+K  
Sbjct: 983  QIPTVIFGTVNGVIGVVASLQQEQFNFLQRLQHCLAKVIKGVGGLSHEQWRSFSSERKNA 1042

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DAKNFLDGDLIESFLDL+R +MDE+S  M+VSVEELCKRVEE+TRLH
Sbjct: 1043 DAKNFLDGDLIESFLDLNRAKMDEVSAAMSVSVEELCKRVEEMTRLH 1089


>gi|302769568|ref|XP_002968203.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
 gi|300163847|gb|EFJ30457.1| hypothetical protein SELMODRAFT_145521 [Selaginella moellendorffii]
          Length = 1089

 Score = 1282 bits (3318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/767 (79%), Positives = 686/767 (89%), Gaps = 3/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN Q D++ SYVEVLE +VNLGPIVD CVVDLERQGQGQVVTCSGAYKDGSLRIVR
Sbjct: 324  QLIKLNAQVDSRNSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAYKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS ELQGIKGMWSLR+++ D FD FLVVSFISETRILAMN++DELEETEIEG
Sbjct: 384  NGIGINEQASAELQGIKGMWSLRATSKDVFDIFLVVSFISETRILAMNMDDELEETEIEG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCH+AI++Q++QVTS S+RLV +TSR    EW++P   ++NVATANASQVLL
Sbjct: 444  FDSEAQTLFCHNAIHDQIIQVTSTSLRLVDATSRRQLTEWRTPSAVAINVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGG+LVY+EIG G LTEVKH QL+ EISCLDINPIG +P  S IAAVGMWTDISV++F
Sbjct: 504  ATGGGNLVYIEIGRGSLTEVKHVQLQNEISCLDINPIGTDPDRSNIAAVGMWTDISVQVF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP+L ++ KE LGGEIIPRSVL+CAFEG+SYLLCALGDGHL NFL++   G+L+DRKK+
Sbjct: 564  SLPNLEVLAKESLGGEIIPRSVLICAFEGVSYLLCALGDGHLFNFLIDTSNGQLSDRKKI 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI LRTF SKN THVFAASDRPTVIYSSNKKLLYSNVNLKEV+HMCPFNSA+FPD
Sbjct: 624  SLGTQPIMLRTFRSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEES 427
            SLAI KEGELTIGTIDDIQKLHIR++ LGEHPRRICHQEQ+RTF +C+ +  +    E+ 
Sbjct: 684  SLAIGKEGELTIGTIDDIQKLHIRTVALGEHPRRICHQEQTRTFGLCTARFYSNPNGEDH 743

Query: 428  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
            E HFV+LLDDQTFE + +Y LDTFE GC+I++CSF+DD   YYCVGTAY LPEENEP+KG
Sbjct: 744  ESHFVKLLDDQTFEVLGSYNLDTFENGCTIITCSFTDDPATYYCVGTAYALPEENEPSKG 803

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            RIL+F VEDGK QL+ EKETKGAVY+LNAFNGKLLA INQKIQLYKW  R D TRELQSE
Sbjct: 804  RILIFTVEDGKFQLVTEKETKGAVYNLNAFNGKLLAGINQKIQLYKWTQR-DSTRELQSE 862

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
            CGHHGHILALYVQ+RGDFIVVGDLMKSISLL+YK EEGAIEERARDYNANWM+AVEILDD
Sbjct: 863  CGHHGHILALYVQSRGDFIVVGDLMKSISLLLYKPEEGAIEERARDYNANWMTAVEILDD 922

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            DIYLGAEN+FNLFTVRKNS+ ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD++  
Sbjct: 923  DIYLGAENSFNLFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDNETS 982

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            QIPTVIFGTVNGVIGV+ASL  EQ+ FL++LQ  L KVIKGVGGL+HEQWRSF++E+K  
Sbjct: 983  QIPTVIFGTVNGVIGVVASLQQEQFNFLQRLQHCLAKVIKGVGGLSHEQWRSFSSERKNA 1042

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DAKNFLDGDLIESFLDL+R +MDE+S  M+VSVEELCKRVEE+TRLH
Sbjct: 1043 DAKNFLDGDLIESFLDLNRAKMDEVSAAMSVSVEELCKRVEEMTRLH 1089


>gi|168047617|ref|XP_001776266.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672361|gb|EDQ58899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1089

 Score = 1280 bits (3313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/767 (80%), Positives = 688/767 (89%), Gaps = 3/767 (0%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+LN Q D KGSYVEVLE +VNLGPIVD CVVDLERQGQGQVVTCSGA+KDGSLRIVR
Sbjct: 324  QLIRLNHQADVKGSYVEVLESFVNLGPIVDLCVVDLERQGQGQVVTCSGAFKDGSLRIVR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKGMWSLR+S+ D +DTFLVVSFISETRILAMN +DELEETEI+G
Sbjct: 384  NGIGINEQASVELQGIKGMWSLRASSSDVYDTFLVVSFISETRILAMNTDDELEETEIDG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QTLFCH+A+++QLVQVT+GS+RLV++ +R+   EWK+P   ++NVATANASQVLL
Sbjct: 444  FDSEAQTLFCHNAVHDQLVQVTAGSLRLVNAKTRKQLTEWKAPAPMTINVATANASQVLL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGG+LVY+EIG G LT V H+QLEYEISCLDINP+GENP  S + AVGMWTDISVRIF
Sbjct: 504  ATGGGNLVYIEIGQGTLTGVAHSQLEYEISCLDINPVGENPERSNLVAVGMWTDISVRIF 563

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L LI KE LGGEIIPRSVL C+F+G++YLLCA+GDGHL NF+LN  TGEL+DRKK+
Sbjct: 564  ALPSLTLINKEMLGGEIIPRSVLFCSFDGLAYLLCAVGDGHLFNFMLNPSTGELSDRKKI 623

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI LRTF SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV+HMCPFNSA+FPD
Sbjct: 624  SLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPD 683

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA--EES 427
            SLAI KEGELTIGTIDDIQKLHIR++PLGE P RI HQEQSR+FAICS K       E+ 
Sbjct: 684  SLAIGKEGELTIGTIDDIQKLHIRTVPLGERPCRIAHQEQSRSFAICSAKYSQGPNNEDI 743

Query: 428  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
            E H+VRL++DQTFE  S + LD +E GCSI++CSF+DDSNVYYCVGTAY LPEE+EPTKG
Sbjct: 744  ETHYVRLIEDQTFEITSGFALDLYEIGCSIITCSFTDDSNVYYCVGTAYALPEESEPTKG 803

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            RILVF+VEDGKLQL+AEKE KGAVY+LNAFNGKLLA INQKI LYKW LR DGTR L+ E
Sbjct: 804  RILVFLVEDGKLQLVAEKEMKGAVYNLNAFNGKLLAGINQKIALYKWTLR-DGTRVLEIE 862

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
              HHGHILALYVQ+RGDFIVVGDLMKSISLLIYK EEGAIEERARDYNANWM+AVEILDD
Sbjct: 863  SSHHGHILALYVQSRGDFIVVGDLMKSISLLIYKPEEGAIEERARDYNANWMTAVEILDD 922

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            D YLGAEN+FNLFTVRKN++ ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS+  
Sbjct: 923  DTYLGAENSFNLFTVRKNNDAATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEAS 982

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
             IPTVIFGTVNGVIGVIASLP +++LFL+KLQ  L KVIKGVGGL+HEQWRSF+NE+KTV
Sbjct: 983  LIPTVIFGTVNGVIGVIASLPQDKFLFLQKLQQALVKVIKGVGGLSHEQWRSFSNERKTV 1042

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DA+NFLDGDLIESFLDLSR +M+EI+  + +SVEELCKRVEELTRLH
Sbjct: 1043 DARNFLDGDLIESFLDLSRNKMEEIAAPLEISVEELCKRVEELTRLH 1089


>gi|218197365|gb|EEC79792.1| hypothetical protein OsI_21216 [Oryza sativa Indica Group]
          Length = 1089

 Score = 1275 bits (3298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/765 (81%), Positives = 690/765 (90%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ D  GSYVEVLERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 325  QLVKLNLQADPNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DP+D +LVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +QTQTLFC +AI + L+QVT+ SVRLVS TSREL ++W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQTQTLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKH QLE+EISC+D+NPIGENP YS +AAVGMWTDISVRI 
Sbjct: 505  ATGGGHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIGENPQYSSLAAVGMWTDISVRIL 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDGHL +FLLN  TGELTDRKKV
Sbjct: 565  SLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTGELTDRKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AA PD
Sbjct: 625  SLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAIPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL E       +    T  +    NQ+  EESE 
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLNEQHVAFAIRNVQDTSVLQLQHNQTSIEESET 744

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD QTFEF+S Y LD +E+GCSI+SCSFSDD+NVYYCVGTAYVLPEENEP+KGRI
Sbjct: 745  HFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGRI 804

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVF VEDG+LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR+DG+ ELQSECG
Sbjct: 805  LVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECG 864

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            HHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEE ARDYNANWMSAVE+LDD+I
Sbjct: 865  HHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANWMSAVEMLDDEI 924

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            Y+GAENN+N+FTVRKNS+ ATDEERGRLEVVGEYHLGEFVNR RHGSLVMRLPDS++GQI
Sbjct: 925  YIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGSLVMRLPDSEMGQI 984

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGT+NGVIG+IASLPHEQY+FLEKLQ+ L K IKGVG L+HEQWRSF+N+KKT +A
Sbjct: 985  PTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIKGVGNLSHEQWRSFHNDKKTSEA 1044

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NFLDGDLIESFLDLSR +M+E++K M V VEEL KRVEELTRLH
Sbjct: 1045 RNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTRLH 1089


>gi|242089089|ref|XP_002440377.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
 gi|241945662|gb|EES18807.1| hypothetical protein SORBIDRAFT_09g030580 [Sorghum bicolor]
          Length = 1783

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/784 (78%), Positives = 692/784 (88%), Gaps = 23/784 (2%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLNLQ DA GS+VE+LERYVNLGPIVDFCVVDL+RQGQGQVVTCSGA+KDGSLR+VR
Sbjct: 325  QLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQASVELQGIKG+WSL+SS +DP+D +LVVSFISETR LAMN+EDELEETEIEG
Sbjct: 385  NGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEG 444

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +QTQTLFC +A  + L+QVT+ SVRLVS TSREL ++W +P G+SVNVA+ANASQVLL
Sbjct: 445  FDAQTQTLFCQNATNDLLIQVTANSVRLVSCTSRELVDQWNAPAGFSVNVASANASQVLL 504

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATGGGHLVYLEI D  L EVKHAQLE+EISCLD+NPIGENP YS +AAVGMWTDISVRIF
Sbjct: 505  ATGGGHLVYLEIRDSKLVEVKHAQLEHEISCLDLNPIGENPQYSSLAAVGMWTDISVRIF 564

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPDL LI KE+LGGEI+PRSVLLC  EG+SYLLCALGDG+L +FLLN  TGELTDRKKV
Sbjct: 565  SLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGNLFSFLLNASTGELTDRKKV 624

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQPI+LRTFSSK TTHVFA+SDRPTVIYSSNKKLLYSNVNLKEV+HMCPFN+AAFPD
Sbjct: 625  TLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAFPD 684

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            SLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQS+T A CS K     EESE 
Sbjct: 685  SLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSKTLAFCSFKYNQSVEESET 744

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            H +RLLD QTFE +  YPLD +E+GCSI+SCSF+DD+NVYYCVGTAYV+PEENEPTKGRI
Sbjct: 745  HLIRLLDHQTFESLCVYPLDQYEFGCSIISCSFADDNNVYYCVGTAYVIPEENEPTKGRI 804

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            LVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWM R+DG+ ELQSECG
Sbjct: 805  LVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECG 864

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE-----------------------EGA 586
            HHGHILALY QTRGDFIVVGDLMKSISLL+YK                         E A
Sbjct: 865  HHGHILALYTQTRGDFIVVGDLMKSISLLVYKVVPLTVCLTHIVLSVIFFVSLFVVLESA 924

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
            IEERARDYNANWM+AVE+LDD++Y+GAEN +NLFTVRKNS+ ATD+ER RLEVVGEYHLG
Sbjct: 925  IEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERARLEVVGEYHLG 984

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 706
            EFVNRFRHGSLVMRLPDS++GQIPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K I
Sbjct: 985  EFVNRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIGIIASLPHDQYVFLEKLQSTLVKYI 1044

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
            KGVG L+HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR++M+E+SK M V VEEL KR
Sbjct: 1045 KGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSKR 1104

Query: 767  VEEL 770
            V+ +
Sbjct: 1105 VDTI 1108


>gi|413948669|gb|AFW81318.1| hypothetical protein ZEAMMB73_456332 [Zea mays]
          Length = 674

 Score = 1120 bits (2896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/673 (80%), Positives = 605/673 (89%)

Query: 102 FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 161
           +LVVSFISETR LAMN+EDELEETEIEGF +QTQTLFC +AI + L+QVT+ SVRLVS T
Sbjct: 2   YLVVSFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAINDLLIQVTANSVRLVSCT 61

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCL 221
           SREL ++W +P G+SVNVA+ANASQVLLATGGGHLVYLEI D  L EVKHAQLE+EISCL
Sbjct: 62  SRELVDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCL 121

Query: 222 DINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISY 281
           D+NPIGE+  YS +AAVGMWTDISVRIFSLPDL LI KE+LGGEI+PRSVLLC  EG+SY
Sbjct: 122 DLNPIGEHLEYSSLAAVGMWTDISVRIFSLPDLVLIRKENLGGEIVPRSVLLCTLEGVSY 181

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           LLCALGDG+L +FLLN  TGELTDRKKV+LGTQPI+LRTFSSK TTHVFA+SDRPTVIYS
Sbjct: 182 LLCALGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYS 241

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 401
           SNKKLLYSNVNLKEV+HMCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  
Sbjct: 242 SNKKLLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQA 301

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
           RRICHQEQS+T A CS K     EESE H +RLLD QTFE +  YPLD +E GCSI+SCS
Sbjct: 302 RRICHQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCS 361

Query: 462 FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 521
           F DD+NVYYCVGTAYV+PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKL
Sbjct: 362 FVDDNNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKL 421

Query: 522 LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 581
           LAAINQKIQLYKWM R+DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YK
Sbjct: 422 LAAINQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYK 481

Query: 582 HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 641
           HEE AIEERARDYNANWM+AVE+LDD++Y+GAEN +NLFTVRKNS+ ATD+ER +LEVVG
Sbjct: 482 HEESAIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERAKLEVVG 541

Query: 642 EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
           EYHLGEFVNRFRHGSLVMRLPDS++G+IPTVIFGT+NGVIG+IASLPH+ Y FLEK Q+ 
Sbjct: 542 EYHLGEFVNRFRHGSLVMRLPDSEIGKIPTVIFGTINGVIGIIASLPHDHYTFLEKFQST 601

Query: 702 LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
           L K IKGVG ++HEQWRSF+N+KKT +A+NFLDGDLIESFLDLSR++M+ +SK M VSVE
Sbjct: 602 LVKYIKGVGNMSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEVVSKAMGVSVE 661

Query: 762 ELCKRVEELTRLH 774
           +L K VEELTRLH
Sbjct: 662 DLSKIVEELTRLH 674


>gi|449519304|ref|XP_004166675.1| PREDICTED: DNA damage-binding protein 1a-like [Cucumis sativus]
          Length = 596

 Score = 1092 bits (2824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/593 (88%), Positives = 562/593 (94%), Gaps = 5/593 (0%)

Query: 187 VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
           VLLATGGG LV+LEI DG+L E KH QLE+EISCLDINPIG+NP+ SQ+AAVGMWTDISV
Sbjct: 4   VLLATGGGVLVHLEICDGLLVEKKHIQLEHEISCLDINPIGDNPNCSQLAAVGMWTDISV 63

Query: 247 RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG----E 302
           RIFSLPDLNL+TKE LGGEIIPRSVLLC FEG+ + LCALGDGHLLNF+LN  +     E
Sbjct: 64  RIFSLPDLNLLTKEQLGGEIIPRSVLLCTFEGVCFCLCALGDGHLLNFILNTNSNSNSCE 123

Query: 303 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
           L DRKKVSLGTQPITLRTFSSKN THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF
Sbjct: 124 LMDRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 183

Query: 363 NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQ 421
           NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH RRICHQEQSRTFAICSL+ NQ
Sbjct: 184 NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICHQEQSRTFAICSLRYNQ 243

Query: 422 SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 481
           S  E++EMHF+RLLDDQTFE ISTY LDT+EYGCSILSCSFSDD+NVYYCVGTAYV+PEE
Sbjct: 244 SGTEDTEMHFIRLLDDQTFESISTYALDTYEYGCSILSCSFSDDNNVYYCVGTAYVMPEE 303

Query: 482 NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
           NEPTKGRILVF+VE+GKLQLIAEKETKG+VYSLNAFNGKLLAAINQKIQLYKW LRDDGT
Sbjct: 304 NEPTKGRILVFVVEEGKLQLIAEKETKGSVYSLNAFNGKLLAAINQKIQLYKWTLRDDGT 363

Query: 542 RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
           RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA
Sbjct: 364 RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 423

Query: 602 VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL 661
           VEILDDDIYLGAEN FNLFTVRKNSEGATDEER RLEVVGEYHLGEFVNRF+HGSLVMRL
Sbjct: 424 VEILDDDIYLGAENYFNLFTVRKNSEGATDEERSRLEVVGEYHLGEFVNRFQHGSLVMRL 483

Query: 662 PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
           PDSDVGQIPTVIFG+VNGVIGVIASLPH+QY+FLE+LQ+NLRKVIKGVGGL+HEQWRSFN
Sbjct: 484 PDSDVGQIPTVIFGSVNGVIGVIASLPHDQYVFLERLQSNLRKVIKGVGGLSHEQWRSFN 543

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
           NEK+T +AKNFLDGDLIESFLDL+R++M+EIS+ M+VS EELCKRVEELTRLH
Sbjct: 544 NEKRTAEAKNFLDGDLIESFLDLNRSKMEEISRAMSVSAEELCKRVEELTRLH 596


>gi|357135348|ref|XP_003569272.1| PREDICTED: DNA damage-binding protein 1a-like [Brachypodium
            distachyon]
          Length = 1074

 Score = 1053 bits (2723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/765 (66%), Positives = 620/765 (81%), Gaps = 12/765 (1%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN+Q DA  S+VE+LE+++N GPIVDFCVVD ER+GQGQV+TCSGAYKDGS+R VR
Sbjct: 322  QLIKLNIQADASASFVEILEQFMNTGPIVDFCVVDTERRGQGQVITCSGAYKDGSIRAVR 381

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NG+ I +QASVEL+G+KG+WS++SS +DP+DTFLVV+FI+ET  LAMN+E+ELEE +I+G
Sbjct: 382  NGVVITDQASVELRGMKGLWSMKSSLNDPYDTFLVVTFINETHFLAMNMENELEEVDIKG 441

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+TQTL C  AI+NQL+QVTS SVRLVSS S EL ++W +P  +SVNVA ANA+QVLL
Sbjct: 442  FDSETQTLACGSAIHNQLIQVTSRSVRLVSSVSLELLDQWFAPARFSVNVAAANANQVLL 501

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG  HLVYLEI    +  VKH QLE+EISCLDINPIGENP YS +AAVGMWTDISVRIF
Sbjct: 502  ATGNCHLVYLEITSSKIVPVKHIQLEHEISCLDINPIGENPQYSSLAAVGMWTDISVRIF 561

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP L LI KEHLG E++PRSVLLC  E +SYL C LGDGHL +F+LN  T EL+DR++V
Sbjct: 562  SLPGLKLIRKEHLG-EVVPRSVLLCTIEAVSYLFCGLGDGHLFSFVLNSSTCELSDRRRV 620

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            SLG QPI+L  FSS+N THVFAASDRP VIYSS++KLLYS  NLKEV+H+CPFN+A FP+
Sbjct: 621  SLGAQPISLHIFSSQNRTHVFAASDRPAVIYSSDQKLLYSYANLKEVNHVCPFNTAVFPE 680

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            S+ +AKE EL+IG I+DI++LHIR+IPL E  RRICHQEQS+T A+CS K +    ES  
Sbjct: 681  SIVLAKESELSIGEINDIRQLHIRTIPLKEQARRICHQEQSQTLALCSFKPKFIHAESGK 740

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
            HFVRLLD QTF  +ST+ LD FE GCSI+SCSFSDD N YYCVGTAY+LP E EPTKGRI
Sbjct: 741  HFVRLLDYQTFWVLSTHTLDEFECGCSIVSCSFSDDDNFYYCVGTAYILPYEIEPTKGRI 800

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            L+F+VE+ KL+L+AE+ETKGAVYSLNA  GKLLAA+NQKI +YKW+ RD+   +LQSEC 
Sbjct: 801  LIFLVEERKLRLVAERETKGAVYSLNALTGKLLAAVNQKIIVYKWVRRDN-RHQLQSECS 859

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
            + G +LAL+ QT G FIVVGD+++S+SLL YK+EEG IE   RD+N  W++AV +LDDDI
Sbjct: 860  YRGCVLALHTQTHGHFIVVGDMVRSVSLLRYKYEEGLIEVVTRDFNTKWITAVAMLDDDI 919

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            Y+GA+N  NLFT+            GR  VVGEYHLG+ VNR  HGSLVM   DS++GQI
Sbjct: 920  YIGADNCCNLFTLHS----------GRPGVVGEYHLGDLVNRMHHGSLVMHHTDSEIGQI 969

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            PTVIFGT++G IGVIAS P++QY+FLEKLQ+ L K IK VG L+H +WRSF N  +T +A
Sbjct: 970  PTVIFGTISGAIGVIASFPYDQYVFLEKLQSVLVKFIKSVGNLSHVEWRSFYNVSRTAEA 1029

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +NF+DGDLIESFL LS ++M+E+S+ M +  +ELCK VEEL +LH
Sbjct: 1030 RNFVDGDLIESFLSLSPSKMEEVSQVMGLRADELCKIVEELRKLH 1074


>gi|384250802|gb|EIE24281.1| hypothetical protein COCSUDRAFT_28729 [Coccomyxa subellipsoidea
            C-169]
          Length = 1101

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/770 (58%), Positives = 581/770 (75%), Gaps = 8/770 (1%)

Query: 10   QLIKLN---LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 66
            QL++L+   + P    ++VEVLE   NLGPI+DF VVDLERQGQGQVV CSG   DGSLR
Sbjct: 330  QLVRLHPTPVTPQEPSNFVEVLETMTNLGPIIDFVVVDLERQGQGQVVMCSGIMADGSLR 389

Query: 67   IVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            IVRNGIG+ EQA+VEL GIKGMW+LR+S  D FDTFLV+SF+ ETRILA+N +DEL+E E
Sbjct: 390  IVRNGIGMIEQATVELPGIKGMWALRASHMDAFDTFLVISFVGETRILAINADDELDEAE 449

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
            + GF +  QTL C + + + LVQV    VRLV +++R+L ++W+ P G ++NVA+ + +Q
Sbjct: 450  LPGFSADAQTLCCGNTVSDHLVQVAGADVRLVDASTRQLTHQWRPPAGLNINVASVSPTQ 509

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
               +T  G+LVYLE+G+  + +  H +L+ E++C+DI+P+ E+   + + AVG W D+ V
Sbjct: 510  ASPSTAHGNLVYLELGESGIEQKGHVKLDAEVACVDISPLSEDGEAASLLAVGTW-DMRV 568

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
             IFSLP +  +  E LGGEIIPRSVL  AFEG+ YLLCA+GDG L NF ++  TG L DR
Sbjct: 569  HIFSLPAMAPLVSEPLGGEIIPRSVLFAAFEGVPYLLCAMGDGQLYNFHVDEATGALADR 628

Query: 307  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            KK+ LGT+PI LR+F S   +HVFAASDRPTVIYS+NKKLLYSNVN  EV+ M  FNS++
Sbjct: 629  KKICLGTKPIMLRSFRSNGQSHVFAASDRPTVIYSANKKLLYSNVNENEVNFMTSFNSSS 688

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA-- 424
            FPDSLA+AKEG +TIG+ID IQKLHIR++PLGE PRR+ HQE SR+F + +  N      
Sbjct: 689  FPDSLALAKEGAMTIGSIDQIQKLHIRTVPLGEQPRRLAHQEASRSFLVLTSPNNGATGM 748

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 484
            +++    VRLLDDQTFE +  + L+T E  C+  S SFSDD   YY VGTA  + EE EP
Sbjct: 749  DDAGPDSVRLLDDQTFETLDRFGLETNEVCCAAASMSFSDDPCPYYVVGTAITVAEEPEP 808

Query: 485  TKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
            TKGRILVF  + GKL L+ EKE KGA Y+L+ F GKL+A IN ++QL+KW   +DG+REL
Sbjct: 809  TKGRILVFGAKGGKLSLVCEKEVKGAAYNLHPFQGKLIAGINSRVQLFKWTQSEDGSREL 868

Query: 545  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
             +EC H GH+LALY+ TRGDF++VGDLM+S+ LLIY+ +EG +E RARDY  +WM+AVE+
Sbjct: 869  TNECSHVGHVLALYIVTRGDFVIVGDLMRSLQLLIYRADEGILEVRARDYKTHWMTAVEV 928

Query: 605  LDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            LDDD YLGAEN+ N+FT+RKN++ A DE+R RLE VG+YHLG FVNRFRHGSLVM+LPDS
Sbjct: 929  LDDDTYLGAENSNNIFTLRKNTDAAADEDRNRLETVGQYHLGVFVNRFRHGSLVMKLPDS 988

Query: 665  DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
            +  +IPTV+F T+NG IGVIASLP +Q+ FL +LQ  LRKVIKGVGGL+H  WR+F +E 
Sbjct: 989  EAAKIPTVLFVTINGSIGVIASLPQQQFQFLSRLQDCLRKVIKGVGGLSHVAWRTFQDEH 1048

Query: 725  KTVDAKNFLDGDLIESFLDLSRTRMDEISKTM--NVSVEELCKRVEELTR 772
              + ++NF+DGDLIE FLDL R  M+ +++ M   V+ E+L + VEEL+R
Sbjct: 1049 TKMPSQNFVDGDLIEQFLDLKRDSMERVAREMGEGVTSEDLLRMVEELSR 1098


>gi|428164905|gb|EKX33915.1| hypothetical protein GUITHDRAFT_158867 [Guillardia theta CCMP2712]
          Length = 1092

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/772 (58%), Positives = 564/772 (73%), Gaps = 11/772 (1%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L+   D   S +EVLE + NLGPI DFCVVDLERQGQGQVVTCSG  KDGSLR+VR
Sbjct: 325  QLIRLHPDKDENDSNIEVLESFTNLGPIQDFCVVDLERQGQGQVVTCSGTLKDGSLRVVR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQA+VEL GIKG+WSLR S D  +D +L+ SF++ETR+L +  ++EL ETEI+G
Sbjct: 385  NGIGINEQAAVELPGIKGLWSLRESIDAQYDKYLIQSFVNETRVLEIA-DEELSETEIDG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT+FC + + + L+Q+T  S+RLVS+ S++L  EW  P G  + VA  N  QV+L
Sbjct: 444  FDHNAQTIFCSNVLGDCLLQITEVSLRLVSTKSKQLLKEWFPPNGERITVAGGNVQQVVL 503

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSY--SQIAAVGMWTDISVR 247
             +G   L+YL++ +G +TEVK  +++ EI+CL++NP+GE   +  S   AVG W ++S+ 
Sbjct: 504  TSGKRTLIYLDVSNGDVTEVKRIEMDQEIACLNLNPLGEKSDHNKSDFVAVGHW-NLSLS 562

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            +  LP + ++  E +GG+ IPRS+LL   EG+ YLLCALGDG+L  F ++  T ++ +RK
Sbjct: 563  MLRLPSMEVVCTESIGGDAIPRSLLLVTLEGVDYLLCALGDGYLFTFAIDASTAQIGERK 622

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            K+SLGT P+ L  F S+  THVFAASDRPTVIYS+N+KLL+SNVNLKEV+ M PFNS  F
Sbjct: 623  KISLGTHPMILSKFMSRGATHVFAASDRPTVIYSNNRKLLFSNVNLKEVTQMAPFNSEGF 682

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC--SLKNQSCAE 425
            PDSLAIA E  L IG IDDIQKLHIR++ L E PRRICHQE S+TF +   S++     E
Sbjct: 683  PDSLAIATETSLRIGVIDDIQKLHIRTVYLREQPRRICHQESSKTFCVATLSIRINRDGE 742

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 485
            E E  F++L DDQTFE + TY L  FE  CS+   SFSDD  +YY VGTA  +P+E+EP 
Sbjct: 743  EVEEQFIKLFDDQTFEILDTYQLQEFENTCSVECASFSDDPTLYYIVGTATAVPQESEPK 802

Query: 486  KGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
            +GR+LVF V D KL L A KE KGA Y +  FNGKLLA IN KI+L++    D G  EL 
Sbjct: 803  EGRLLVFEVIDRKLHLKASKEIKGAPYQIKPFNGKLLAGINSKIELFRLSDSDTGHMELV 862

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            SEC H GHIL LY+QTRGDFIV GDLM+SISLL YK  +G IEE ARD+NANWM+AV+IL
Sbjct: 863  SECCHRGHILVLYLQTRGDFIVAGDLMRSISLLTYKQVDGQIEEIARDFNANWMTAVDIL 922

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            DDD +LGAE  FNLFTVRKN++  +DEER RLEVVGEYHLG+ VNRF+ GSLV+R   SD
Sbjct: 923  DDDTFLGAEGYFNLFTVRKNTDATSDEERARLEVVGEYHLGDMVNRFQRGSLVLR--SSD 980

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
                 T+IFGTVNG+IGVIA L  E+Y FL K+Q  L  VIKGVGGL HE WRSF NE+ 
Sbjct: 981  TPTTDTIIFGTVNGMIGVIAVLSKEEYEFLLKVQDALNFVIKGVGGLRHEDWRSFENERT 1040

Query: 726  --TVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVEELCKRVEELTRLH 774
                  K F+DGDLIESFLDL R +M+E+   + +++VEEL +++EEL RLH
Sbjct: 1041 QGARAPKGFIDGDLIESFLDLRREKMEEVCHAIGSITVEELSRKIEELQRLH 1092


>gi|307111604|gb|EFN59838.1| hypothetical protein CHLNCDRAFT_29381 [Chlorella variabilis]
          Length = 1108

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/772 (56%), Positives = 552/772 (71%), Gaps = 12/772 (1%)

Query: 10   QLIKLN---LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 66
            QLI+L+     P    S+VEVL+   NLGPIVDF VVDLERQGQGQVVTCSG   DGSLR
Sbjct: 342  QLIRLHSSPPDPSQPTSFVEVLDSQPNLGPIVDFAVVDLERQGQGQVVTCSGTGVDGSLR 401

Query: 67   IVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            IVRNGIG+ EQA VEL GIK +WSLR +  D  DT+LV++F  ETR+L MN EDEL+E E
Sbjct: 402  IVRNGIGVVEQALVELPGIKDLWSLRKTFMDAHDTYLVLTFSGETRVLGMNAEDELDEAE 461

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
            I GF S   TL C + +++QL+QVT+ + RLV   +++L  +W+      + +A A+ +Q
Sbjct: 462  IPGFNSTALTLCCANTVHDQLLQVTATAFRLVDCMTQQLVTQWEPGADGRITIAAASPTQ 521

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            ++ A GG  LVYLE+GDG + E    QL+ +I+CLDI P+GE    S++ AVG W  +  
Sbjct: 522  LVAAVGGRTLVYLELGDGQIEEKGRVQLDADIACLDITPVGELSEASEVVAVGSWA-LEA 580

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
             IF+LP L  + +E L  ++IPRS L   FEG +YL+  LGDG L+N+ L+      TDR
Sbjct: 581  HIFALPSLAPLFREKLPTDVIPRSTLFAQFEGDTYLMYGLGDGQLVNYRLDADGP--TDR 638

Query: 307  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            KK++LGT+PI+LRTF S+    VFAASDRPTVIYSSN+KLLYSN+N  EVSHM  FN+AA
Sbjct: 639  KKIALGTKPISLRTFRSRGAAAVFAASDRPTVIYSSNRKLLYSNLNENEVSHMTSFNTAA 698

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 426
            FPDSLA+ K+  L IGTID+IQKLH+R++PLGE PRRI HQE SRTFA+   +     E 
Sbjct: 699  FPDSLALGKQEALLIGTIDEIQKLHVRTVPLGEQPRRIAHQETSRTFAVTCTQATISGEG 758

Query: 427  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK 486
             +   VRL+D+QTFE +    L   E  CS+ S    DD   YY VGTA+  P E EPTK
Sbjct: 759  GDS--VRLVDEQTFELLDRLQLQQHELACSLCSTQLGDDPATYYVVGTAFAPPNEPEPTK 816

Query: 487  GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
            GRI V     GKL ++ EKET+GAVYSL  F G+LLA IN ++Q+YKW+ + +G R L  
Sbjct: 817  GRIFVLAAAGGKLCVVCEKETRGAVYSLAEFQGRLLAGINSRVQMYKWLEQGEGGRALVP 876

Query: 547  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            EC H GH+LALY+ TRGD +VVGDLMKSI LL +  EEGA+E RARD++ NWMSAV +LD
Sbjct: 877  ECSHAGHVLALYLATRGDLVVVGDLMKSIQLLAWGEEEGALELRARDFHPNWMSAVTVLD 936

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
            DD Y+GAEN++NLFTVR+N++ ATDEER RLE VG YHLGEFVNRF+ GSLVMRLPDS++
Sbjct: 937  DDTYMGAENSYNLFTVRRNADAATDEERSRLETVGRYHLGEFVNRFQPGSLVMRLPDSEL 996

Query: 667  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK-K 725
             QIPTV+FGT+NGVIGV+ASLPH QY  LE LQ  +RKV+KGVGG +H QWR+F+N+   
Sbjct: 997  SQIPTVLFGTINGVIGVVASLPHAQYQLLESLQEAMRKVVKGVGGFDHAQWRAFSNQHMP 1056

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTM---NVSVEELCKRVEELTRLH 774
               A+ F+DGDLIE FLDL R   + +   M     +VE + + VEEL+RLH
Sbjct: 1057 ATPARQFVDGDLIEQFLDLKRDSAEAVIAAMAGGGATVESVTQLVEELSRLH 1108


>gi|255080490|ref|XP_002503825.1| predicted protein [Micromonas sp. RCC299]
 gi|226519092|gb|ACO65083.1| predicted protein [Micromonas sp. RCC299]
          Length = 1114

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/792 (57%), Positives = 566/792 (71%), Gaps = 34/792 (4%)

Query: 10   QLIKLNLQP----------DAKG-SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 58
            QL++L+ QP             G +YVE LE + NLGPIVDF VVDL+R GQGQVVTCSG
Sbjct: 327  QLVRLHAQPVRCAADQVPATPDGLTYVECLESFTNLGPIVDFAVVDLDRHGQGQVVTCSG 386

Query: 59   AYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFLVVSFISETRILAM 116
              KDGSLR+VRNG+GI+E+A++EL G+KG WSLR   ++  P DT LVVSF  ETRILA+
Sbjct: 387  VNKDGSLRVVRNGVGIHERAAIELPGVKGCWSLRRGDASTHPSDTHLVVSFAGETRILAI 446

Query: 117  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
            + +DEL E E  GF +  QTL   +     +VQ  +  VRLV++   E R  W  P G +
Sbjct: 447  DDDDELAECEFRGFSANEQTLCVCNVDGGFVVQCVASGVRLVNAADGEPRATWSPPGGAT 506

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILT-EVKHAQLE-YEISCLDINPIGE-NPSYS 233
            V+VA+AN +Q L+AT GG L  L +G   L  E   A L+  EI+CLD  P+ +   + +
Sbjct: 507  VSVASANRTQALVATTGGSLYSLALGSAALIRETASASLDGKEIACLDCTPLSDPGDAAA 566

Query: 234  QIAAVGMWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAFEGISYLLCALGDGH 290
            ++ AVG WT   V + ++PDL L+T   LGG    +IPR+VLLC+FEG  +LL  LGDG 
Sbjct: 567  RLCAVGTWT-AEVFLLTMPDLRLVTTSPLGGGGGGVIPRAVLLCSFEGTPHLLAGLGDGA 625

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
            L  F ++ + G L D K +SLGTQPITLRTF SK  THVFA SDRPTVIY +N KL+YSN
Sbjct: 626  LHTFGVDPEAGTLRDGKSLSLGTQPITLRTFRSKGATHVFAGSDRPTVIYGNNGKLIYSN 685

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            VNL+EV H CPFN  AFPDSLA+A E +LTIG IDDIQKLHIR++PLGE PRRI HQ ++
Sbjct: 686  VNLREVLHACPFNCDAFPDSLALASESDLTIGGIDDIQKLHIRTVPLGEQPRRIAHQPET 745

Query: 411  RTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
            RT+A  +        +   +FVRL DD TFE +  + L+  E   S++SC+F+DD  VYY
Sbjct: 746  RTYAALTENF-----DENGYFVRLFDDVTFETLCKFRLEPDEQDSSVISCAFADDPRVYY 800

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
             VGT Y LPEE EPT+GRILVF  EDGKLQL+AEKE KGAVY+LNAFNGKLLA IN K++
Sbjct: 801  VVGTGYSLPEEPEPTRGRILVFRAEDGKLQLVAEKEVKGAVYNLNAFNGKLLAGINSKVE 860

Query: 531  LYKW--MLRDDG----TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            L++    +  DG    T EL  EC HHGHI+ALYV  RG+FIVVGDLMKS+SLL YK EE
Sbjct: 861  LFRGGDPVGADGAGGSTYELAKECSHHGHIVALYVAVRGEFIVVGDLMKSVSLLAYKPEE 920

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
              IEERARDYNANWM+AV+ILDDD YLGAENNFNLFT+R+ S+ ATDEER RLEVVGEYH
Sbjct: 921  SVIEERARDYNANWMTAVDILDDDTYLGAENNFNLFTLRRQSDAATDEERSRLEVVGEYH 980

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            +GEFVNRFR GSLVMRLPD +   +PT++FGTV+GVIGV+A+LP EQ+ FL  LQ  L K
Sbjct: 981  VGEFVNRFRRGSLVMRLPDQENADVPTLLFGTVSGVIGVLATLPREQFEFLSALQAALNK 1040

Query: 705  VIKGVGGLNHEQWRSFNNE---KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
             + GVGGL+H+ WRSF NE   +    A+ F+DGDLIESFLDL   +  E++  + +SV+
Sbjct: 1041 TVSGVGGLSHDAWRSFQNEHRHRAKDGARGFVDGDLIESFLDLRPEKAREVAAAVKLSVD 1100

Query: 762  ELCKRVEELTRL 773
            EL +RVE+L RL
Sbjct: 1101 ELTRRVEDLQRL 1112


>gi|303271531|ref|XP_003055127.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463101|gb|EEH60379.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1223

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/826 (55%), Positives = 563/826 (68%), Gaps = 77/826 (9%)

Query: 23   SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 82
            +YVEVLE + +LGPIVDF VVDL+R GQGQVVTCSG +KDGSLR+VRNG+GI+EQA++EL
Sbjct: 398  NYVEVLESFTSLGPIVDFVVVDLDRHGQGQVVTCSGVHKDGSLRVVRNGVGIHEQAAIEL 457

Query: 83   QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
             G+KG W+L+++ D   DTFLVV+FI ETRILA+N +DEL+ETE EGF    + L C + 
Sbjct: 458  PGVKGCWALKNADDAVSDTFLVVAFIGETRILAINDKDELDETEFEGFAGDERALACANV 517

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
                  QVTSG +RLV   +  LR  W   PG  V+VA AN +QV++A  GG LV +  G
Sbjct: 518  DGGYACQVTSGGIRLVDVATGALRARWTPEPGERVSVAAANRTQVVVALEGGTLVSVAAG 577

Query: 203  DG-----------ILTEVKHAQLEYEISCLDINPIGE-NPSYSQIAAVGMWTDISVRIFS 250
             G           +L E+    + +EI+CLD+ P+ +   + S+I AVG+W+   VR+ +
Sbjct: 578  GGGDAMDVDDASPLLRELARVNVGHEIACLDVTPLADPRAASSEICAVGLWS-AEVRVLA 636

Query: 251  LPDLNLITKEHL-GGEIIPRSVLLCAFEGISYLLCALGDGHLLNF-LLNMKTGELTDRKK 308
               L  ++   L   E+IPR+VLLC+FEGI YLL  LGDG L  F L+  ++G + D KK
Sbjct: 637  TATLEELSSAPLTDAEVIPRAVLLCSFEGIPYLLAGLGDGQLFTFALMGERSGIIGDGKK 696

Query: 309  VSLGTQ--------------PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
            +S+GTQ              PITL+TF +KNTTHVFA SDRPTVIYS NKKL+YSNVNL+
Sbjct: 697  LSVGTQARSIHWFPYDRVGVPITLKTFRNKNTTHVFAGSDRPTVIYSQNKKLIYSNVNLR 756

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 414
            EV HMC FN  AFPDSLA+A E ELTIG IDDIQKLHIR++PLGE PRRI HQ  SRTFA
Sbjct: 757  EVLHMCAFNCDAFPDSLALASESELTIGGIDDIQKLHIRTVPLGEQPRRIAHQPASRTFA 816

Query: 415  ICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGT 474
            + +        E E  +VRL DD TFE +  Y LD  E   SI+SCSF+DD   YY VGT
Sbjct: 817  VLTSHVSDVTNE-ESFYVRLFDDVTFETLFKYRLDVGETDSSIISCSFADDPASYYVVGT 875

Query: 475  AYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            A+ LPEE EP++GRILV   ++G+L L+AEKE KGAVY+LNAFNGKLLA IN K+QL+KW
Sbjct: 876  AFSLPEEVEPSRGRILVLRADEGRLSLVAEKEVKGAVYNLNAFNGKLLAGINSKVQLFKW 935

Query: 535  MLRDDG----------------------------------TRELQSECGHHGHILALYVQ 560
            + R  G                                  T EL SEC HHGHI+ALYV 
Sbjct: 936  VSRGAGAGAGAGGGAEGGAVAMADGGGGGGGGGGAPAAATTCELASECSHHGHIVALYVD 995

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
             RGDFIVVGDLMKSISLL+YK +EG IEERARD+N NWM+AV  LDD+ YLGAEN+FNLF
Sbjct: 996  VRGDFIVVGDLMKSISLLVYKPDEGVIEERARDFNPNWMTAVCALDDETYLGAENSFNLF 1055

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQI 669
            TVRKNS+ A DEER RL+V+GEYHLGEFVNRFR GSLVMRLP                + 
Sbjct: 1056 TVRKNSDAAADEERSRLDVIGEYHLGEFVNRFRAGSLVMRLPGDGDGAGLGLGLDASNEA 1115

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT--V 727
            PT +FGTVNG IGV+ASLP   + FL  LQ  + KV+ GVGG +H+ WRSF+NE ++  V
Sbjct: 1116 PTQLFGTVNGAIGVVASLPESTHTFLAALQKAMNKVVSGVGGFSHDAWRSFHNEHRSRLV 1175

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            +A+ F+DGDLIESFLDL   +  E++  + V VEEL KR+EEL R+
Sbjct: 1176 EARGFVDGDLIESFLDLRPEKASEVASVVGVGVEELTKRIEELVRI 1221


>gi|345328202|ref|XP_003431248.1| PREDICTED: DNA damage-binding protein 1-like [Ornithorhynchus
            anatinus]
          Length = 1045

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 564/815 (69%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 237  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 296

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS+++   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 297  NGIGIHEHASIDLPGIKGLWPLRSNSNRETDDTLVLSFVGQTRVLMLNGE-EVEETELTG 355

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLV+   + L +EWK P G +++VA+ N+SQV++
Sbjct: 356  FVDNQQTFFCGNVAHQQLIQITSASVRLVTQEPKALVSEWKEPQGKNISVASCNSSQVVV 415

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 416  AVGRA-LYYLQIHPRELRQISHTEMEHEVACLDITPLGDSHGMSPLCAIGLWTDISARIL 474

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV
Sbjct: 475  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSIETGLLSDRKKV 534

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 535  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 594

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 595  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEGSQCFGVLSSRIEVQDASGGT 654

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 655  TALRPSGSTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 714

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D+N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 715  NEYALSLVSCKLGKDANTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 774

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 775  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 830

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 831  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 890

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 891  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 950

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 951  SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1010

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1011 QEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1045


>gi|413081953|ref|NP_741992.2| DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293344614|ref|XP_002725831.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|293356422|ref|XP_002728912.1| PREDICTED: DNA damage-binding protein 1 [Rattus norvegicus]
 gi|149062405|gb|EDM12828.1| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/815 (53%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+GE+   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGESNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|73983859|ref|XP_533275.2| PREDICTED: DNA damage-binding protein 1 [Canis lupus familiaris]
 gi|291409601|ref|XP_002721069.1| PREDICTED: damage-specific DNA binding protein 1 [Oryctolagus
            cuniculus]
 gi|301781686|ref|XP_002926259.1| PREDICTED: DNA damage-binding protein 1-like [Ailuropoda melanoleuca]
          Length = 1140

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|149725200|ref|XP_001502072.1| PREDICTED: DNA damage-binding protein 1 [Equus caballus]
          Length = 1140

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHAQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTATHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|385865228|gb|AFI92852.1| DNA damage-binding protein 1 [Danio rerio]
          Length = 1140

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/815 (53%), Positives = 565/815 (69%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS +    D  LV+SF+ +TR+L ++ E E+EETE++G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGE-EVEETELQG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLV+  S+ L +EWK P G +++VA+ N +QV+L
Sbjct: 451  FVDNQQTFFCGNVAHQQLIQITSVSVRLVTQDSKALVSEWKEPQGRNISVASCNNTQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE  + S I AVG+WTDIS R+ 
Sbjct: 511  AVGR-VLYYLQILSGELKQISSTEMEHEVACLDITPLGERTADSCICAVGLWTDISARLL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++RKKV
Sbjct: 570  KLPCFTPLHKEMLGGEIIPRSILMTTFEGSHYLLCALGDGALFYFGLDIQTGVLSERKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
            SLA+A    LTIGTID+IQKLHIR++PL E P+RIC+QE S+ F + S + +        
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQDASGTT 749

Query: 422  -------------------------------SCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  AAVRPSASTQALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D  VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSMVSCKLGRDPAVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG+ EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGSFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  LQ  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M
Sbjct: 1046 GWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1106 QEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 1140


>gi|344295432|ref|XP_003419416.1| PREDICTED: DNA damage-binding protein 1 [Loxodonta africana]
          Length = 1140

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/815 (53%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +    QL+Q+TS SVRLVS   + L +EWK P G +V+VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAQQQLIQITSASVRLVSQEPKALVSEWKEPQGKNVSVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|348560393|ref|XP_003465998.1| PREDICTED: DNA damage-binding protein 1-like [Cavia porcellus]
          Length = 1140

 Score =  852 bits (2200), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGE-EVEETELVG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSCGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  QLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TVLRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCRLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|354504619|ref|XP_003514371.1| PREDICTED: DNA damage-binding protein 1-like [Cricetulus griseus]
 gi|344258340|gb|EGW14444.1| DNA damage-binding protein 1 [Cricetulus griseus]
          Length = 1140

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|119594343|gb|EAW73937.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_e [Homo
           sapiens]
          Length = 896

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 88  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 147

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 148 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 206

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 207 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 266

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 267 AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 325

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 326 KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 385

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 386 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 445

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 446 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 505

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 506 TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 565

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 566 NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 625

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 626 VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 681

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 682 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 741

Query: 631 DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
           DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 742 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 801

Query: 690 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
             Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 802 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 861

Query: 750 DEISKTMN----------VSVEELCKRVEELTRLH 774
            E+   +            + ++L K VEELTR+H
Sbjct: 862 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 896


>gi|410974071|ref|XP_003993471.1| PREDICTED: DNA damage-binding protein 1 [Felis catus]
          Length = 1193

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 385  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 444

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 445  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 503

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 504  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 563

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 564  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 622

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 623  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 682

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 683  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 742

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 743  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 802

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 803  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 862

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 863  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 922

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 923  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 978

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 979  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1038

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1039 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1098

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1099 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1158

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1159 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1193


>gi|432851195|ref|XP_004066902.1| PREDICTED: DNA damage-binding protein 1-like [Oryzias latipes]
          Length = 1140

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/815 (53%), Positives = 562/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV V+E + NLGPI+D CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVTVMETFTNLGPILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEAGRESDDMLVLSFVGQTRVLMLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT +C +  + QL+Q+TSGSVRLV   S+ L +EWK P G +++VA  N +QV+L
Sbjct: 451  FVDNQQTFYCGNVAHQQLIQITSGSVRLVLQDSKALVSEWKEPQGRNISVAACNHTQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE+ S S + AVG+WTDIS R+ 
Sbjct: 511  AVGRA-LYYLQILAGELKQISTTEMEHEVACLDITPLGESSSESPLCAVGLWTDISARML 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++RKKV
Sbjct: 570  KLPCFTPLHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALSERKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDASGAI 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  SAVRPSASTQALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLP 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EYG S++SC    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  SEYGLSLVSCRLGKDPSVYFIVGTAMVYPEEPEPKQGRIIVFHYTDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              +  L  LQ  L KVIK VG + H  WRSF  E+KT  A  F+DGDLIESFLDL R +M
Sbjct: 1046 GWHSLLLDLQNRLNKVIKSVGKIEHSFWRSFYTERKTEQATGFIDGDLIESFLDLGRAKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1106 QEVVSTLQIDDGGGMKREATVDEVIKIVEELTRIH 1140


>gi|348526664|ref|XP_003450839.1| PREDICTED: DNA damage-binding protein 1-like [Oreochromis niloticus]
          Length = 1140

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/815 (53%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT +C +  + QL+Q+TSGSVRLV   S+ L +EWK P G +++VA  N +QV+L
Sbjct: 451  FVDNQQTFYCGNVAHQQLIQITSGSVRLVLQDSKTLVSEWKEPQGRNISVAACNHTQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE    S + AVG+WTDIS R+ 
Sbjct: 511  AVGRA-LYYLQILAGELKQISTTEMEHEVACLDITPLGEGGGESPLCAVGLWTDISARVL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++RKKV
Sbjct: 570  KLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALSERKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDVSGTT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  SAVRPSASTQALSSSVSSSKLFPSSTSPHETSFGEEVEVHNLLVVDQHTFEVLHAHQFLP 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  SEYALSLVSCRLGKDPSVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGK LA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKFLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKSMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  LQ  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M
Sbjct: 1046 GWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1106 QEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 1140


>gi|122692537|ref|NP_001073731.1| DNA damage-binding protein 1 [Bos taurus]
 gi|426251842|ref|XP_004019630.1| PREDICTED: DNA damage-binding protein 1 [Ovis aries]
 gi|134034086|sp|A1A4K3.1|DDB1_BOVIN RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|119223918|gb|AAI26630.1| Damage-specific DNA binding protein 1, 127kDa [Bos taurus]
 gi|296471644|tpg|DAA13759.1| TPA: DNA damage-binding protein 1 [Bos taurus]
          Length = 1140

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIA 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|355752055|gb|EHH56175.1| Damage-specific DNA-binding protein 1, partial [Macaca fascicularis]
          Length = 1125

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 317  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 376

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 377  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 435

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 436  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 495

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 496  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 554

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 555  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 614

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 615  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 674

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 675  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 734

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 735  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 794

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 795  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 854

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 855  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 910

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 911  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 970

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 971  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1030

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1031 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1090

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1091 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1125


>gi|119594340|gb|EAW73934.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_b [Homo
           sapiens]
          Length = 923

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 115 QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 174

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 175 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 233

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 234 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 293

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 294 AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 352

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 353 KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 412

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 413 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 472

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 473 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 532

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 533 TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 592

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 593 NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 652

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 653 VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 708

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 709 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 768

Query: 631 DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
           DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 769 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 828

Query: 690 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
             Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 829 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 888

Query: 750 DEISKTMN----------VSVEELCKRVEELTRLH 774
            E+   +            + ++L K VEELTR+H
Sbjct: 889 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 923


>gi|7657011|ref|NP_056550.1| DNA damage-binding protein 1 [Mus musculus]
 gi|134034087|sp|Q3U1J4.2|DDB1_MOUSE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|5931596|dbj|BAA84699.1| XPE UV-damaged DNA binding factor [Mus musculus]
 gi|16307148|gb|AAH09661.1| Damage specific DNA binding protein 1 [Mus musculus]
 gi|74182145|dbj|BAE34102.1| unnamed protein product [Mus musculus]
 gi|74196166|dbj|BAE32993.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|403255013|ref|XP_003920244.1| PREDICTED: DNA damage-binding protein 1 [Saimiri boliviensis
            boliviensis]
          Length = 1140

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|395852550|ref|XP_003798801.1| PREDICTED: DNA damage-binding protein 1 [Otolemur garnettii]
          Length = 1140

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLV    + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVCQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|358440070|pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
 gi|358440072|pdb|4A0B|C Chain C, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4)
          Length = 1159

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 351  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 410

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 411  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 469

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 470  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 529

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 530  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 588

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 589  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 648

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 649  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 708

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 709  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 768

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 769  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 828

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 829  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 888

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 889  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 944

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 945  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1004

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1005 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1064

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1065 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1124

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1125 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1159


>gi|221046711|pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Photoproduct
            Containing Dna-Duplex
 gi|221046715|pdb|3EI2|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Abasic Site
            Containing Dna-Duplex
 gi|221046719|pdb|3EI3|A Chain A, Structure Of The Hsddb1-Drddb2 Complex
          Length = 1158

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 350  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 409

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 410  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 468

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 469  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 528

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 529  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 588  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 647

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 648  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 707

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 708  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 767

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 768  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 827

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 828  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 888  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 943

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 944  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1003

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1004 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1063

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1064 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1123

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1124 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1158


>gi|358440058|pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex (
            Purine At D-1 Position) At 3.0 A Resolution (Cpd 1)
 gi|358440062|pdb|4A09|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 15 Bp Cpd-Duplex
            (Purine At D-1 Position) At 3.1 A Resolution (Cpd 2)
          Length = 1159

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 351  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 410

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 411  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 469

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 470  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 529

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 530  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 588

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 589  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 648

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 649  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 708

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 709  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 768

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 769  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 828

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 829  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 888

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 889  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 944

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 945  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1004

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1005 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1064

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1065 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1124

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1125 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1159


>gi|418316|sp|P33194.1|DDB1_CERAE RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DDBa; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=UV-damaged DNA-binding protein 1; Short=UV-DDB 1
 gi|304026|gb|AAA03021.1| UV-damaged DNA-binding protein [Chlorocebus aethiops]
          Length = 1140

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|384941436|gb|AFI34323.1| DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1140

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|359546285|pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex
 gi|361132519|pdb|4A0K|C Chain C, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1159

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 351  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 410

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 411  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 469

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 470  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 529

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 530  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 588

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 589  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 648

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 649  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 708

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 709  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 768

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 769  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 828

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 829  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 888

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 889  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 944

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 945  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1004

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1005 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1064

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1065 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1124

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1125 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1159


>gi|358440066|pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex (
            Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3)
          Length = 1159

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 351  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 410

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 411  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 469

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 470  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 529

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 530  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 588

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 589  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 648

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 649  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 708

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 709  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 768

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 769  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 828

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 829  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 888

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 889  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 944

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 945  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 1004

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 1005 DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1064

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1065 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1124

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1125 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1159


>gi|148529014|ref|NP_001914.3| DNA damage-binding protein 1 [Homo sapiens]
 gi|296218432|ref|XP_002807395.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Callithrix jacchus]
 gi|397516558|ref|XP_003828491.1| PREDICTED: DNA damage-binding protein 1 [Pan paniscus]
 gi|402893195|ref|XP_003909786.1| PREDICTED: DNA damage-binding protein 1 [Papio anubis]
 gi|426368721|ref|XP_004051351.1| PREDICTED: DNA damage-binding protein 1 [Gorilla gorilla gorilla]
 gi|12643730|sp|Q16531.1|DDB1_HUMAN RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=DNA damage-binding protein a;
            Short=DDBa; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=HBV X-associated protein 1;
            Short=XAP-1; AltName: Full=UV-damaged DNA-binding factor;
            AltName: Full=UV-damaged DNA-binding protein 1;
            Short=UV-DDB 1; AltName: Full=XPE-binding factor;
            Short=XPE-BF; AltName: Full=Xeroderma pigmentosum group
            E-complementing protein; Short=XPCe
 gi|203282525|pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1)
 gi|695362|gb|AAA62838.1| X-associated protein 1, partial [Homo sapiens]
 gi|1052865|gb|AAC50349.1| DDBa p127 [Homo sapiens]
 gi|15079750|gb|AAH11686.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|29792243|gb|AAH50530.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|30354567|gb|AAH51764.1| Damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|61354161|gb|AAX44048.1| damage-specific DNA binding protein 1, 127kDa [Homo sapiens]
 gi|119594341|gb|EAW73935.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_c [Homo
            sapiens]
 gi|168275638|dbj|BAG10539.1| DNA damage-binding protein 1 [synthetic construct]
 gi|189065506|dbj|BAG35345.1| unnamed protein product [Homo sapiens]
 gi|355566436|gb|EHH22815.1| Damage-specific DNA-binding protein 1 [Macaca mulatta]
 gi|380784123|gb|AFE63937.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380808126|gb|AFE75938.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|380810144|gb|AFE76947.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|383408123|gb|AFH27275.1| DNA damage-binding protein 1 [Macaca mulatta]
 gi|410305600|gb|JAA31400.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
 gi|410352015|gb|JAA42611.1| damage-specific DNA binding protein 1, 127kDa [Pan troglodytes]
          Length = 1140

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|400260815|pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
 gi|401871507|pdb|4E5Z|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
            Dimerization And Its Roles In Chromatinized Dna Repair
          Length = 1150

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 342  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 401

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 402  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 460

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 461  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 520

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 521  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 579

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 580  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 639

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 640  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 699

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 700  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 759

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 760  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 819

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 820  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 879

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 880  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 935

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 936  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 995

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 996  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1055

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1056 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1115

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1116 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1150


>gi|74215029|dbj|BAE33503.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +++S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQRDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|361132523|pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
 gi|361132525|pdb|4A0L|C Chain C, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
            Site Containing Dna-Duplex
          Length = 1144

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 336  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 395

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 396  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 454

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 455  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 514

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 515  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 573

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 574  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 633

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 634  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 693

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 694  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 753

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 754  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 813

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 814  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 873

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 874  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 929

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 930  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 989

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 990  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1049

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1050 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1109

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1110 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1144


>gi|311247551|ref|XP_003122699.1| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Sus scrofa]
          Length = 1140

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N++QV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSNQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIS 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|5353754|gb|AAD42230.1|AF159853_1 damage-specific DNA binding protein 1 [Mus musculus]
          Length = 1140

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 557/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSRYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYS N KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSXNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|74138855|dbj|BAE27231.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +P+
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPN 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|194389106|dbj|BAG61570.1| unnamed protein product [Homo sapiens]
          Length = 1009

 Score =  849 bits (2193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 557/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 201  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 260

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 261  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 319

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 320  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 379

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 380  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 438

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 439  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 498

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 499  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 558

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 559  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQGTSGGT 618

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 619  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 678

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 679  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 738

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 739  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 794

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FN F  +K+S   T
Sbjct: 795  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNSFVCQKDSAATT 854

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 855  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 914

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 915  SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 974

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 975  QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1009


>gi|441604084|ref|XP_004087862.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1
            [Nomascus leucogenys]
          Length = 1140

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 557/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGP VD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVAAMETFTNLGPXVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|45383688|ref|NP_989547.1| DNA damage-binding protein 1 [Gallus gallus]
 gi|82098863|sp|Q805F9.1|DDB1_CHICK RecName: Full=DNA damage-binding protein 1; AltName: Full=DDB p127
            subunit; AltName: Full=Damage-specific DNA-binding
            protein 1; AltName: Full=UV-damaged DNA-binding factor
 gi|28375613|dbj|BAC56999.1| damaged-DNA binding protein DDB p127 subunit [Gallus gallus]
 gi|53130071|emb|CAG31438.1| hypothetical protein RCJMB04_6h2 [Gallus gallus]
          Length = 1140

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS +    D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDSHREMDNMLVLSFVGQTRVLMLNGE-EVEETELTG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N++QV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI    L ++   ++E+E++CLDI P+G+    S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLEIRPQELRQINCTEMEHEVACLDITPLGDTNGMSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG  HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1106 QEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140


>gi|197097564|ref|NP_001126613.1| DNA damage-binding protein 1 [Pongo abelii]
 gi|75041202|sp|Q5R649.1|DDB1_PONAB RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|55732122|emb|CAH92767.1| hypothetical protein [Pongo abelii]
          Length = 1140

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 557/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VY +  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYPMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|327278830|ref|XP_003224163.1| PREDICTED: DNA damage-binding protein 1-like [Anolis carolinensis]
          Length = 1140

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPHHETDNTLVLSFVGQTRVLMLNGE-EVEETELTG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLV+   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVTQEPKALVSEWKEPNGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI    L ++   ++E+E++CLDI P+G+    S + A+G+WTDIS RI 
Sbjct: 511  AVGR-VLYYLEIHPQELKQISCTEMEHEVACLDITPLGDASGMSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP  +L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFDLLHKEMLGGEIIPRSILMTTFENSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLSESPRKICYQEVSQCFGVLSSRIEVQDASGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V P+E EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPDEAEPKQGRIVVFHYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALYV+T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYVKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+  G +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEFGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1106 QEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140


>gi|147906138|ref|NP_001083624.1| DNA damage-binding protein 1 [Xenopus laevis]
 gi|82186503|sp|Q6P6Z0.1|DDB1_XENLA RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|38303806|gb|AAH61946.1| Ddb1 protein [Xenopus laevis]
          Length = 1140

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/815 (53%), Positives = 559/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + + +GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLTTESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LR + D   D  LV+SF+ +TR+L +  E E+EET++ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGE-EVEETDLAG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G  V+V + N+ QVLL
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQNPQNLVSEWKEPQGRKVSVCSCNSRQVLL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI  G L +    ++E+E++CLD+ P+G N + S + A+G+WTDIS RI 
Sbjct: 511  AVGR-VLYYLEIHPGELRQTSCTEMEHEVACLDVTPLGGNDTLSSLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP   L+ KE LGGEIIPRS+L+ +FE   YLLCALGDG L  F LN  TG L+DRKKV
Sbjct: 570  SLPGFQLLHKEMLGGEIIPRSILMTSFESSHYLLCALGDGALFYFSLNTDTGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S + +        
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLFESPRKICYQEVSQCFGVLSSRIEVQDASGGS 749

Query: 422  ----------------SCA---------------EESEMHFVRLLDDQTFEFISTYPLDT 450
                            SC+               EE E+H + ++D  TFE + T+    
Sbjct: 750  SPLRPSASTQALSSSVSCSKLFSGSTSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D   Y+ VGTA V P+E EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYTLSLVSCKLGKDPTTYFVVGTAMVYPDEAEPKQGRIVVFQYNDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1106 QEVIANLQIDDGSGMKRETTVDDLIKVVEELTRIH 1140


>gi|326919947|ref|XP_003206238.1| PREDICTED: DNA damage-binding protein 1-like [Meleagris gallopavo]
          Length = 1079

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 271  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 330

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS +    D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 331  NGIGIHEHASIDLPGIKGLWPLRSDSHHEMDNMLVLSFVGQTRVLMLNGE-EVEETELTG 389

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N++QV++
Sbjct: 390  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVVV 449

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI    L ++   ++E+E++CLDI P+G+    S + A+G+WTDIS RI 
Sbjct: 450  AVGRA-LYYLEIRPQELRQINCTEMEHEVACLDITPLGDTNGMSPLCAIGLWTDISARIL 508

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   ++ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV
Sbjct: 509  KLPSFEMLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKV 568

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 569  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 628

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 629  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGT 688

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 689  TALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 748

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 749  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGA 808

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 809  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 864

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 865  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 924

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG  HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 925  DEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 984

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 985  SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1044

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1045 QEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1079


>gi|259155222|ref|NP_001158852.1| DNA damage-binding protein 1 [Salmo salar]
 gi|223647700|gb|ACN10608.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/815 (53%), Positives = 558/815 (68%), Gaps = 57/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  +  GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNDSGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT +C +  + QL+Q+TSG VRLV   S+ L +EWK P G +++VA  N+SQV+L
Sbjct: 451  FVDNLQTFYCGNVAHQQLIQITSGGVRLVMQDSKALVSEWKEPQGRNISVAACNSSQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE    S + AVG+WTDIS R+ 
Sbjct: 511  AVGRA-LYYLQILSGELKQISTVEMEHEVACLDITPLGEG-GESPLCAVGLWTDISARVL 568

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L++ TG L++RKKV
Sbjct: 569  KLPCFTALHKEMLGGEIIPRSILMTTFEGGYYLLCALGDGALFYFGLDLTTGVLSERKKV 628

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 629  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 688

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
            SLA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S + +        
Sbjct: 689  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTT 748

Query: 422  -------------------------------SCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 749  AAVRPSASTQALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQ 808

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D  VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 809  SEYALSMVSCRLGRDPAVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 868

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 869  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 924

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 925  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 984

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL  
Sbjct: 985  DEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSE 1044

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  LQ  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M
Sbjct: 1045 GWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKM 1104

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1105 QEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 1139


>gi|427780151|gb|JAA55527.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1181

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/831 (51%), Positives = 573/831 (68%), Gaps = 72/831 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL+ + + +GS+VE++E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 357  QLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 416

Query: 70   NGIGINEQASVELQGIKGMWSLR---------SSTDDPFDTF-----LVVSFISETRILA 115
            NGIGI+E AS++L GIKGMW LR             DP D+      LV+SF+ +TR+L 
Sbjct: 417  NGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVLM 476

Query: 116  MNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            ++ E E+EETE+ GF +  QT FC +    QL+QVT+ +VRLV S +++L NEWK P   
Sbjct: 477  LSGE-EVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGAR 535

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            +++V T N SQV+ A     +  LEIGDG+L ++ +A+LE E++CLDI P+ E    + +
Sbjct: 536  NISVVTCNQSQVVCAVRK-EVFCLEIGDGVLNQISNAELENEVACLDITPLSEKAEKATL 594

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFL 295
             AVG+WTDIS+RI SLP L  + KE++GGEIIPRS+L+  FEGI YLLCALGDG L  FL
Sbjct: 595  CAVGLWTDISIRILSLPSLQQLQKENIGGEIIPRSILITTFEGIHYLLCALGDGSLFYFL 654

Query: 296  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 355
            L   TG LTDRKKV+LGTQP  L+TF S +T++VFA SDRPTVIYSSN KL++SNVNLKE
Sbjct: 655  LEATTGALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKE 714

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 415
            V+HMCP NS  +PDSLA+A +  L IGTID+IQKLHIR++PLGE PRRI +QE ++TF +
Sbjct: 715  VNHMCPLNSEGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLGELPRRIAYQEATQTFGV 774

Query: 416  CSLK-----------------------------------------NQSCAEESEMHFVRL 434
             +++                                         N    +E E+H + +
Sbjct: 775  ITIRNDILGSSGLTPVRPSASTQAQNVTHSAQMSSIFKPGSVSTGNDQLGQEVEIHNLLI 834

Query: 435  LDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV 494
            +D  TFE +  +     EY  SI+S    +D N YY VGTA VLP+E++P +GRI+VF  
Sbjct: 835  IDQHTFEVLHAHQFMQTEYAMSIVSTRLGNDPNTYYIVGTANVLPDESDPKQGRIVVFHW 894

Query: 495  EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
             DGKL+ +AE+E KGA YS+  FNGKLLAAIN  ++L++W    +  REL++EC H  +I
Sbjct: 895  VDGKLEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEW----NAERELRNECSHFNNI 950

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            LALY++ +GDF++VGDLM+S+SLL YK  EG  EE ARDY  NWMS+VEILDDD +LGAE
Sbjct: 951  LALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGAE 1010

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVI 673
            +  NLF  +K+S   TDEER  L+ VG++HLGEFVN FRHGSLVM+ P ++      +V+
Sbjct: 1011 STTNLFVCQKDSAATTDEERQHLQEVGQFHLGEFVNVFRHGSLVMQHPGETSSPTQGSVL 1070

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
            FGT++G IG+++ LP + Y FL ++Q  L KVIK VG ++H  WRSF+ E+KT  A  F+
Sbjct: 1071 FGTIHGAIGLVSQLPADFYTFLSEVQEKLTKVIKSVGKIDHAFWRSFSTERKTEPAVGFI 1130

Query: 734  DGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 774
            DGDLIESFLDLSR +M E+ + +          + SV++L K +EEL+R+H
Sbjct: 1131 DGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKRDASVDDLIKIIEELSRIH 1181


>gi|427788481|gb|JAA59692.1| Putative dna damage-binding protein 1 [Rhipicephalus pulchellus]
          Length = 1156

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/831 (51%), Positives = 573/831 (68%), Gaps = 72/831 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL+ + + +GS+VE++E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLIKLHAERNDQGSFVEIMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLR---------SSTDDPFDTF-----LVVSFISETRILA 115
            NGIGI+E AS++L GIKGMW LR             DP D+      LV+SF+ +TR+L 
Sbjct: 392  NGIGIHEHASIDLPGIKGMWPLRVGPGVAPHGGDGRDPGDSAERDNTLVLSFVRQTRVLM 451

Query: 116  MNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            ++ E E+EETE+ GF +  QT FC +    QL+QVT+ +VRLV S +++L NEWK P   
Sbjct: 452  LSGE-EVEETELAGFDTSQQTFFCGNVRNKQLIQVTAAAVRLVDSQTKQLLNEWKPPGAR 510

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            +++V T N SQV+ A     +  LEIGDG+L ++ +A+LE E++CLDI P+ E    + +
Sbjct: 511  NISVVTCNQSQVVCAVRK-EVFCLEIGDGVLNQISNAELENEVACLDITPLSEKAEKATL 569

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFL 295
             AVG+WTDIS+RI SLP L  + KE++GGEIIPRS+L+  FEGI YLLCALGDG L  FL
Sbjct: 570  CAVGLWTDISIRILSLPSLQQLQKENIGGEIIPRSILITTFEGIHYLLCALGDGSLFYFL 629

Query: 296  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 355
            L   TG LTDRKKV+LGTQP  L+TF S +T++VFA SDRPTVIYSSN KL++SNVNLKE
Sbjct: 630  LEATTGALTDRKKVTLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKE 689

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 415
            V+HMCP NS  +PDSLA+A +  L IGTID+IQKLHIR++PLGE PRRI +QE ++TF +
Sbjct: 690  VNHMCPLNSEGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLGELPRRIAYQEATQTFGV 749

Query: 416  CSLK-----------------------------------------NQSCAEESEMHFVRL 434
             +++                                         N    +E E+H + +
Sbjct: 750  ITIRNDILGSSGLTPVRPSASTQAQNVTHSAQMSSIFKPGSVSTGNDQLGQEVEIHNLLI 809

Query: 435  LDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV 494
            +D  TFE +  +     EY  SI+S    +D N YY VGTA VLP+E++P +GRI+VF  
Sbjct: 810  IDQHTFEVLHAHQFMQTEYAMSIVSTRLGNDPNTYYIVGTANVLPDESDPKQGRIVVFHW 869

Query: 495  EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
             DGKL+ +AE+E KGA YS+  FNGKLLAAIN  ++L++W    +  REL++EC H  +I
Sbjct: 870  VDGKLEHVAEQEIKGAPYSMLEFNGKLLAAINSTVRLFEW----NAERELRNECSHFNNI 925

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            LALY++ +GDF++VGDLM+S+SLL YK  EG  EE ARDY  NWMS+VEILDDD +LGAE
Sbjct: 926  LALYLRAKGDFVLVGDLMRSMSLLAYKPLEGNFEEIARDYQTNWMSSVEILDDDTFLGAE 985

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVI 673
            +  NLF  +K+S   TDEER  L+ VG++HLGEFVN FRHGSLVM+ P ++      +V+
Sbjct: 986  STTNLFVCQKDSAATTDEERQHLQEVGQFHLGEFVNVFRHGSLVMQHPGETSSPTQGSVL 1045

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
            FGT++G IG+++ LP + Y FL ++Q  L KVIK VG ++H  WRSF+ E+KT  A  F+
Sbjct: 1046 FGTIHGAIGLVSQLPADFYTFLSEVQEKLTKVIKSVGKIDHAFWRSFSTERKTEPAVGFI 1105

Query: 734  DGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 774
            DGDLIESFLDLSR +M E+ + +          + SV++L K +EEL+R+H
Sbjct: 1106 DGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKRDASVDDLIKIIEELSRIH 1156


>gi|223647932|gb|ACN10724.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 1139

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 558/815 (68%), Gaps = 57/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  +  GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNDSGSYVAVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT +C +  + QL+Q+TSG VRLV   S+ L +EWK P G +++VA  N+SQV+L
Sbjct: 451  FVDNLQTFYCGNVAHQQLIQITSGGVRLVMQDSKALVSEWKEPQGRNISVAACNSSQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE+   S + AVG+WTDIS R+ 
Sbjct: 511  AVGRA-LYYLQILSGELKQISTVEMEHEVACLDITPLGEDGD-SPLCAVGLWTDISARVL 568

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L++ +G L++RKKV
Sbjct: 569  KLPCFTALHKEMLGGEIIPRSILMTTFEASYYLLCALGDGALFYFGLDLTSGVLSERKKV 628

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 629  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 688

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +          
Sbjct: 689  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTT 748

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 749  AAVRPSASTQALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQ 808

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 809  SEYALSMVSCRLGRDLSVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 868

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 869  VYSMMEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 924

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 925  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 984

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL  
Sbjct: 985  DEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSE 1044

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  LQ  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M
Sbjct: 1045 GWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKM 1104

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1105 QEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 1139


>gi|90108797|pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108798|pdb|2B5L|B Chain B, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V
            Protein
 gi|90108801|pdb|2B5M|A Chain A, Crystal Structure Of Ddb1
 gi|116667897|pdb|2HYE|A Chain A, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
 gi|1136228|gb|AAA88883.1| UV-damaged DNA binding factor [Homo sapiens]
 gi|1588524|prf||2208446A xeroderma pigmentosum group E-binding factor
          Length = 1140

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/816 (52%), Positives = 560/816 (68%), Gaps = 58/816 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI+E AS++L GIKG+W LRS  + + +DT LV+SF+ +TR+L +N E E+EETE+ 
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETYDT-LVLSFVGQTRVLMLNGE-EVEETELM 449

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV+
Sbjct: 450  GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 509

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI
Sbjct: 510  VAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 568

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKK
Sbjct: 569  LKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 628

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +P
Sbjct: 629  VTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYP 688

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +         
Sbjct: 689  DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGG 748

Query: 420  ------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                                            S  EE E+H + ++D  TFE +  +   
Sbjct: 749  TTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL 808

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
              EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KG
Sbjct: 809  QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 868

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            AVYS+  FNGKLLA+IN  ++LY+W    D    +++EC H+ +I+ALY++T+GDFI+VG
Sbjct: 869  AVYSMVEFNGKLLASINSTVRLYEWTTEKD----VRTECNHYNNIMALYLKTKGDFILVG 924

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            DLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   
Sbjct: 925  DLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAAT 984

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLP 688
            TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL 
Sbjct: 985  TDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLS 1044

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
               Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +
Sbjct: 1045 ESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPK 1104

Query: 749  MDEISKTMN----------VSVEELCKRVEELTRLH 774
            M E+   +            + ++L K VEELTR+H
Sbjct: 1105 MQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|301616502|ref|XP_002937687.1| PREDICTED: DNA damage-binding protein 1-like [Xenopus (Silurana)
            tropicalis]
          Length = 1140

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/815 (52%), Positives = 560/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + + +GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLTAESNEQGSYVVVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LR + D   D  LV+SF+ +TR+L +  E E+EET++ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRVAADRDTDDTLVLSFVGQTRVLTLTGE-EVEETDLAG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLV+   + L +EWK P G  V+V + N+ QVLL
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVAQNPQSLVSEWKEPQGRKVSVCSCNSRQVLL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI  G L ++   ++E+E++CLD+ P+G + + S + A+G+WTDIS RI 
Sbjct: 511  AVGR-VLYYLEIHPGELRQISCTEMEHEVACLDVTPLGGSDTLSSLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLP   L+ KE LGGEIIPRS+L+ +FE   YLLCALGDG L  F LN  TG L+DRKKV
Sbjct: 570  SLPGFQLLHKEMLGGEIIPRSILMTSFESSHYLLCALGDGALFYFSLNTDTGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S + +        
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGS 749

Query: 422  ----------------SCA---------------EESEMHFVRLLDDQTFEFISTYPLDT 450
                            SC+               EE E+H + ++D  TFE + T+    
Sbjct: 750  SPLRPSASTQALSSSVSCSKLFSGSTSPHETSFGEEVEVHNLLIIDQHTFEVLHTHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D   Y+ VGTA V P+E EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYTLSLVSCKLGKDPTTYFVVGTAMVYPDEAEPKQGRIVVFQYNDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSPPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1106 QEVIANLQIDDGSGMKRETTVDDLIKVVEELTRIH 1140


>gi|270346571|pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Hbx
 gi|270346573|pdb|3I7K|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Whx
 gi|270346575|pdb|3I7L|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Ddb2
 gi|270346577|pdb|3I7N|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdtc1
 gi|270346579|pdb|3I7O|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Iqwd1
 gi|270346581|pdb|3I7P|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr40a
 gi|270346583|pdb|3I89|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr22
 gi|270346585|pdb|3I8C|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr21a
 gi|270346587|pdb|3I8E|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
 gi|270346588|pdb|3I8E|B Chain B, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of
            Wdr42a
          Length = 1143

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/816 (52%), Positives = 560/816 (68%), Gaps = 58/816 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI+E AS++L GIKG+W LRS  + + +DT LV+SF+ +TR+L +N E E+EETE+ 
Sbjct: 395  NGIGIHEHASIDLPGIKGLWPLRSDPNRETYDT-LVLSFVGQTRVLMLNGE-EVEETELM 452

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV+
Sbjct: 453  GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 512

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI
Sbjct: 513  VAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 571

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKK
Sbjct: 572  LKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 631

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +P
Sbjct: 632  VTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYP 691

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +         
Sbjct: 692  DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGG 751

Query: 420  ------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                                            S  EE E+H + ++D  TFE +  +   
Sbjct: 752  TTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL 811

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
              EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KG
Sbjct: 812  QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 871

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            AVYS+  FNGKLLA+IN  ++LY+W    D    +++EC H+ +I+ALY++T+GDFI+VG
Sbjct: 872  AVYSMVEFNGKLLASINSTVRLYEWTTEKD----VRTECNHYNNIMALYLKTKGDFILVG 927

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            DLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   
Sbjct: 928  DLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAAT 987

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLP 688
            TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL 
Sbjct: 988  TDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLS 1047

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
               Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +
Sbjct: 1048 ESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPK 1107

Query: 749  MDEISKTMN----------VSVEELCKRVEELTRLH 774
            M E+   +            + ++L K VEELTR+H
Sbjct: 1108 MQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1143


>gi|224050582|ref|XP_002191856.1| PREDICTED: DNA damage-binding protein 1 [Taeniopygia guttata]
          Length = 1140

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/815 (52%), Positives = 558/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPHRETDNTLVLSFVGQTRVLMLNGE-EVEETELTG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N++QV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKSLVSEWKEPNGKNISVASCNSNQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI    L ++   ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLEIRPQELRQISCTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG  HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+   + +          +V++L K VEELTR+H
Sbjct: 1106 QEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140


>gi|221046721|pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046723|pdb|3EI4|C Chain C, Structure Of The Hsddb1-Hsddb2 Complex
 gi|221046725|pdb|3EI4|E Chain E, Structure Of The Hsddb1-Hsddb2 Complex
          Length = 1158

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/816 (52%), Positives = 560/816 (68%), Gaps = 58/816 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 350  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 409

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI+E AS++L GIKG+W LRS  + + +DT LV+SF+ +TR+L +N E E+EETE+ 
Sbjct: 410  NGIGIHEHASIDLPGIKGLWPLRSDPNRETYDT-LVLSFVGQTRVLMLNGE-EVEETELM 467

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV+
Sbjct: 468  GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVV 527

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI
Sbjct: 528  VAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 586

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKK
Sbjct: 587  LKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 646

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +P
Sbjct: 647  VTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYP 706

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +         
Sbjct: 707  DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGG 766

Query: 420  ------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                                            S  EE E+H + ++D  TFE +  +   
Sbjct: 767  TTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL 826

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
              EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KG
Sbjct: 827  QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            AVYS+  FNGKLLA+IN  ++LY+W    D    +++EC H+ +I+ALY++T+GDFI+VG
Sbjct: 887  AVYSMVEFNGKLLASINSTVRLYEWTTEKD----VRTECNHYNNIMALYLKTKGDFILVG 942

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            DLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   
Sbjct: 943  DLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAAT 1002

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLP 688
            TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL 
Sbjct: 1003 TDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLS 1062

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
               Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +
Sbjct: 1063 ESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPK 1122

Query: 749  MDEISKTMN----------VSVEELCKRVEELTRLH 774
            M E+   +            + ++L K VEELTR+H
Sbjct: 1123 MQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1158


>gi|410912407|ref|XP_003969681.1| PREDICTED: DNA damage-binding protein 1-like [Takifugu rubripes]
          Length = 1140

 Score =  845 bits (2183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 561/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GS+V V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT +C +  +NQL+Q+TSGSVRLV   S+ L +EWK P G +++VA  N +QV+L
Sbjct: 451  FVDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEWKEPQGRNISVAACNHTQVVL 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I  G L ++   ++E+E++CLDI P+GE  + S + AVG+WTDIS R+ 
Sbjct: 511  AVGRA-LYYLQILAGELKQISTTEMEHEVACLDITPLGEAGAESPLCAVGLWTDISARVL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++ KKV
Sbjct: 570  KLPCFTPLHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALSECKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDVSGTT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  SPVRPSASTQALSSSMSSSKLFPSSTSPHESSFGEEVEIHSLLVVDQHTFEVLHAHQFLP 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  SEYALSMVSCRLGKDPSVYFVVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECSHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DE+R  L+ VG +HLGEFVN F HGSLV++ L ++      +V+FGTV G+IG++ SL  
Sbjct: 986  DEDRQHLQEVGVFHLGEFVNVFCHGSLVLQNLGETSTPTQGSVLFGTVTGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              +  L  LQ  L KVIK VG + H  WRSF+ E+KT  AK F+DGDLIESFLDL R +M
Sbjct: 1046 GWHSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERKTEQAKGFIDGDLIESFLDLGRAKM 1105

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 1106 QEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 1140


>gi|2632123|emb|CAA05770.1| Xeroderma Pigmentosum Group E Complementing protein [Homo sapiens]
          Length = 1140

 Score =  844 bits (2181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/815 (52%), Positives = 555/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H  +E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTGMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KG 
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGD 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W    D    +++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTEKD----VRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|431910407|gb|ELK13480.1| DNA damage-binding protein 1 [Pteropus alecto]
          Length = 1143

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/818 (52%), Positives = 559/818 (68%), Gaps = 59/818 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQW---RSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
              Y  L  +Q  L KVIK VG + H  +   RSF+ E+KT  A  F+DGDLIESFLD+SR
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSLYPSQRSFHTERKTEPATGFIDGDLIESFLDISR 1105

Query: 747  TRMDEISKTMN----------VSVEELCKRVEELTRLH 774
             +M E+   +            + ++L K VEELTR+H
Sbjct: 1106 PKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1143


>gi|348681092|gb|EGZ20908.1| hypothetical protein PHYSODRAFT_259403 [Phytophthora sojae]
          Length = 1137

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/815 (53%), Positives = 559/815 (68%), Gaps = 51/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN   D  GSY+EVL+ YVN+GPI+DFCV+DL+RQGQGQ+VTCSGA KDG+LR++R
Sbjct: 324  QLIKLNADRDENGSYIEVLDTYVNVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTLRVIR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS EL GIKGMW+LR +     D +L+ S++SE RILA+  EDE+EE EI  
Sbjct: 384  NGIGINEQASAELPGIKGMWALRETFAAEHDKYLLQSYVSEIRILAIGDEDEMEEKEIPA 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  +TL C +   +  +QVT   VRL+S TS  L + W  P G  + VA AN +QV +
Sbjct: 444  F-TNVKTLLCRNMYGDVWLQVTESEVRLISCTSLSLSSTWSPPLGSRITVAAANPTQVAV 502

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSY----------------- 232
            AT GG LVYLE+ +G +TE    ++E+EI+C+DI P+  + +                  
Sbjct: 503  ATSGGVLVYLEVENGQVTEKTKVKMEHEIACVDITPLARSQATDGDVAMTGSSTHWDMAA 562

Query: 233  --SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGH 290
              S I  VG+WT+ SV +  LP L  +T E LG +++PRSVL   FEG  YLL  LGDG 
Sbjct: 563  LNSSICVVGLWTNFSVSVLKLPTLEKLTTESLGTDLLPRSVLCNTFEGKDYLLVGLGDGS 622

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
            L+N+ LN+  G L  RK+VSLG+QP++L TF SKN THVFAA DRPTVIYSSN KLLYSN
Sbjct: 623  LMNYELNVAQGTLGTRKRVSLGSQPLSLSTFRSKNMTHVFAACDRPTVIYSSNNKLLYSN 682

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            +N KEV+ MCPF+S +FP+ LA++ E ELTIGT+DDIQKLHI++  L E  RRI H  +S
Sbjct: 683  INSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQKLHIQTFHLNEWARRIAHDPES 742

Query: 411  RTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV 468
             T  +   S       EE +  FVRL DDQTFE + +Y LD FE   S++ C FS DS+ 
Sbjct: 743  HTLGVLTVSFTVDDTGEEVDQGFVRLFDDQTFEVLHSYRLDPFETPSSVVVCPFSGDSSS 802

Query: 469  --YYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQLIAEKETKGAVYSLNAFNGKLL 522
              Y+ VGTAY+  +E EP +GRILVF V     + KLQL+ EKE KGAVY LNAFNGK+L
Sbjct: 803  GSYFVVGTAYIHEDEAEPHQGRILVFAVTGIHGERKLQLVTEKEVKGAVYCLNAFNGKVL 862

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
            A +N K QLYKW    D  +EL SECGH+GH L LY+++RGDFIVVGDLMKS+SLL YK 
Sbjct: 863  AGVNSKAQLYKWSENTDNEKELVSECGHYGHTLVLYMESRGDFIVVGDLMKSVSLLSYKQ 922

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 642
             +G IEE A+D N+NWMSA+ I+DDD Y+G+E +FNLFTV++NS  A+DEERGRLE VGE
Sbjct: 923  LDGTIEEIAKDLNSNWMSALGIVDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGE 982

Query: 643  YHLGEFVNRFRHGSL-------------VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            +HLGEFVNRFR+GSL             V + P     Q  +++FGTV+G+IGVI  L  
Sbjct: 983  FHLGEFVNRFRYGSLTPAAAGPTDMVDVVEQAPIVPAAQNQSMLFGTVSGMIGVILPLTK 1042

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            +QY FL ++Q  L +V+KGVGG +H+ WR F N +   +A+NF+DGDL+ESFLDL + +M
Sbjct: 1043 DQYSFLLRVQQALTQVVKGVGGFSHKDWRMFENRRSVSEARNFIDGDLVESFLDLPKAQM 1102

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             ++   +N           +VE+L  R+EEL +LH
Sbjct: 1103 TKVVDKLNSDGMLDGTDQFTVEDLTLRIEELAQLH 1137


>gi|405970039|gb|EKC34976.1| DNA damage-binding protein 1 [Crassostrea gigas]
          Length = 1160

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/817 (51%), Positives = 568/817 (69%), Gaps = 61/817 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN++PD  GSYV+ +ER+ NLGPI+D CVVDLERQGQGQ+VTCSGAYK+GSLRI+R
Sbjct: 353  QLVKLNVEPDENGSYVQEMERFTNLGPILDMCVVDLERQGQGQLVTCSGAYKEGSLRIIR 412

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+WSLR ++ + +D  +V+SF+ +TR+L +N E E+EETE+ G
Sbjct: 413  NGIGIHEHASIDLPGIKGIWSLRVNSPE-YDNMIVLSFVGQTRVLMLNGE-EVEETELSG 470

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
              S  QT  C + ++NQL+Q+T  SVRL+S  +++L  EWK   G ++++A++N  QV+ 
Sbjct: 471  IESDQQTFLCANVVHNQLLQITPQSVRLISCDNQKLLKEWKHSGGKNISLASSNTCQVV- 529

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A  G  L YLE+  G + +V  + +E+E++C+D+ P+ E    S + A+G+WTDIS R+ 
Sbjct: 530  ACVGSELYYLELLQGDIKQVSTSTMEHEVACVDLTPLREGEEKSHLCAIGLWTDISARVL 589

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            SLPD N +  E LGGEIIPRS+L+  FEGI YLLCALGDG L  F  N+ TG  T+++KV
Sbjct: 590  SLPDFNSLHVEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNFNIDTGYFTEKRKV 649

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMCP NS  +PD
Sbjct: 650  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPD 709

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +G LTIGTID+IQKLHIR+IPLGE PRRI +QE S+TF + S++          
Sbjct: 710  SLALANDGTLTIGTIDEIQKLHIRTIPLGESPRRIAYQESSQTFGVISMRMDLQDSNGLN 769

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  +E E+H + ++D  TFE + ++ L  
Sbjct: 770  PTRPSASTHAAMMSSSSSGKVTMGTSTMGEHSAGDEVEVHSLLIIDQHTFEVLHSHQLMP 829

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             E+  S++S    +D   YY VGTA V PEE EP +GRI++F   +GKL  IAEKE KGA
Sbjct: 830  NEFATSLISARLGEDPCNYYIVGTALVHPEEAEPKQGRIVIFHFHEGKLNQIAEKEIKGA 889

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             Y+L  FNGKLLA+IN  ++L++W       +EL+ EC +   I+ALY++T+GDFI+VGD
Sbjct: 890  AYTLVEFNGKLLASINSTVRLFEWTT----DKELRLECNYFNSIVALYLKTKGDFILVGD 945

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+SI+LL+YK  EG  EE ARD N NW +AVEILDDD +LGAEN+FNLFT +K+S   T
Sbjct: 946  LMRSITLLLYKPMEGTFEEIARDCNPNWTTAVEILDDDNFLGAENSFNLFTCQKDSASTT 1005

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIASL 687
            DE+R  L+ VG +HLGEFVN FRHGSLVM+   S     PT   V++GTVNG +G++  +
Sbjct: 1006 DEDRQNLQEVGMFHLGEFVNVFRHGSLVMQ--HSGETSTPTQGSVLYGTVNGAVGLVTQV 1063

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
            P E Y FL+ +Q+ L KVIK VG + H  WRSF+ E+KT   + F+DGDLIESFLDL+R 
Sbjct: 1064 PQEFYSFLQDIQSRLAKVIKSVGKIEHSFWRSFHTERKTEACEGFIDGDLIESFLDLNRD 1123

Query: 748  RMDEISKTMNV----------SVEELCKRVEELTRLH 774
            +M E  K + +          +V++L K +EELTR+H
Sbjct: 1124 KMQETVKGLQIDDGSGMKREATVDDLVKTIEELTRIH 1160


>gi|440893607|gb|ELR46310.1| DNA damage-binding protein 1 [Bos grunniens mutus]
          Length = 1143

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/818 (52%), Positives = 559/818 (68%), Gaps = 59/818 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGMSPLCAIGLWTDISARIA 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQW---RSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
              Y  L  +Q  L KVIK VG + H  +   RSF+ E+KT  A  F+DGDLIESFLD+SR
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSLYPSQRSFHTERKTEPATGFIDGDLIESFLDISR 1105

Query: 747  TRMDEISKTMN----------VSVEELCKRVEELTRLH 774
             +M E+   +            + ++L K VEELTR+H
Sbjct: 1106 PKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1143


>gi|355683071|gb|AER97036.1| damage-specific DNA binding protein 1, 127kDa [Mustela putorius furo]
          Length = 1122

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/783 (53%), Positives = 545/783 (69%), Gaps = 46/783 (5%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEI 752
             E+
Sbjct: 1106 QEV 1108


>gi|281345356|gb|EFB20940.1| hypothetical protein PANDA_015888 [Ailuropoda melanoleuca]
          Length = 1124

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/817 (52%), Positives = 558/817 (68%), Gaps = 58/817 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 314  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 373

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 374  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 432

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 433  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 492

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 493  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 551

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 552  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 611

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 612  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 671

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 672  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 731

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 732  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 791

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 792  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 851

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 852  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 907

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 908  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 967

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 968  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1027

Query: 690  EQYLFLEKLQTNLRKVIKGVG-GLNH-EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
              Y  L  +Q  L KVIK +   L H   WRSF+ E+KT  A  F+DGDLIESFLD+SR 
Sbjct: 1028 SWYNLLLDMQNRLNKVIKNITHSLTHLSTWRSFHTERKTEPATGFIDGDLIESFLDISRP 1087

Query: 748  RMDEISKTMN----------VSVEELCKRVEELTRLH 774
            +M E+   +            + ++L K VEELTR+H
Sbjct: 1088 KMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1124


>gi|74178494|dbj|BAE32502.1| unnamed protein product [Mus musculus]
          Length = 1140

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/815 (52%), Positives = 554/815 (67%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE    LLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHCLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR+ PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTDPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++   TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIGQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP  GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKLGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|241260143|ref|XP_002404926.1| DNA repair protein xp-E, putative [Ixodes scapularis]
 gi|215496735|gb|EEC06375.1| DNA repair protein xp-E, putative [Ixodes scapularis]
          Length = 1148

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/824 (51%), Positives = 570/824 (69%), Gaps = 68/824 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN + + +GSYVEV+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 334  QLIKLNSERNEQGSYVEVMEVFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 393

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LR +TD   D  LV+SF+ +TR+L ++ E E+EETE+ G
Sbjct: 394  NGIGIHEHASIDLPGIKGIWPLRVNTDSSRDNTLVLSFVGQTRVLMLSGE-EVEETELAG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +   NQL+QVT+ +VRLV   ++ L NEWK P G +++V T N +QV+ 
Sbjct: 453  FDISQQTFFCGNVRNNQLIQVTAAAVRLVDGKTKLLLNEWKPPGGKNISVVTCNQNQVVC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A     +  LEI DG L +  +A++E E++CLDI P+ +    S + AVG+WTDIS+R+ 
Sbjct: 513  AVRQ-EVFCLEIADGTLKQTSNAEMENEVACLDITPLNDGSGKSDLCAVGLWTDISIRVL 571

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP L  + KE++GGEIIPRS+L+  FEG+ YLLCALGDG L  FLL+  TG ++DRKKV
Sbjct: 572  RLPSLEQLQKENIGGEIIPRSILMTTFEGVHYLLCALGDGSLFYFLLDASTGAVSDRKKV 631

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  L+TF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV+HMCP NS  +PD
Sbjct: 632  TLGTQPTVLKTFKSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCPLNSEGYPD 691

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +G L IGTID+IQKLHIR++PLGE   RI +QE ++TF + +++          
Sbjct: 692  SLALANDGTLLIGTIDEIQKLHIRTVPLGE---RIAYQEATQTFGVITIRNDIQGTGGLT 748

Query: 420  ------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                                          N    +E E+H + ++D  TFE +  +   
Sbjct: 749  PVRPSASTQAQNVTYSSTMSSVFKPGTGSGNDQLGQEVEVHNLLIVDQHTFEVLHAHQFM 808

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
              EY  SI+S     D NVY+ VGTA VLP+E++P +GRI++F   DGKLQ +AEKE KG
Sbjct: 809  QTEYAMSIVSTRLGSDPNVYFIVGTAIVLPDESDPKQGRIIIFHWVDGKLQQVAEKEIKG 868

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            A YSL  FNGKLLA+IN  ++L++W    +  REL +EC H  +ILALY++T+GDFI+VG
Sbjct: 869  APYSLLEFNGKLLASINSTVRLFEW----NAERELHNECSHFNNILALYLKTKGDFILVG 924

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            DLM+S+SLL YK  EG+ EE ARDY  NWM AVEILDDD +LGAE+  NLF  +K+S   
Sbjct: 925  DLMRSMSLLAYKPLEGSFEEIARDYQTNWMCAVEILDDDTFLGAESTTNLFVCQKDSAAT 984

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIASLP 688
            TDE+R  L+ VG++HLGEFVN FRHGSLVM+ P ++      +V+FGT++G IG++A LP
Sbjct: 985  TDEDRQHLQEVGQFHLGEFVNIFRHGSLVMQHPGEASSPTQGSVLFGTIHGAIGLVAQLP 1044

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHE--------QWRSFNNEKKTVDAKNFLDGDLIES 740
             + Y FL ++Q NL KVIK VG ++H          WRSF+ E+KT  A+ F+DGDLIES
Sbjct: 1045 SDFYNFLLEVQGNLTKVIKSVGKIDHTLYPFVRLFTWRSFSTERKTEQAQGFIDGDLIES 1104

Query: 741  FLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 774
            FLDLSR +M E+ + +          + +V++L K +EEL+R+H
Sbjct: 1105 FLDLSRDKMQEVLQGIQMDDGSGMKRDATVDDLIKIIEELSRVH 1148


>gi|119594342|gb|EAW73936.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_d [Homo
            sapiens]
          Length = 1146

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/821 (52%), Positives = 556/821 (67%), Gaps = 62/821 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIK-----GVGGLNHEQ-WRSFNNEKKTVDAKNFLDGDLIESFLD 743
              Y  L  +Q  L KVIK         L H   WRSF+ E+KT  A  F+DGDLIESFLD
Sbjct: 1046 SWYNLLLDMQNRLNKVIKRCFLISTCSLTHPSTWRSFHTERKTEPATGFIDGDLIESFLD 1105

Query: 744  LSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 774
            +SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1106 ISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1146


>gi|444513057|gb|ELV10249.1| DNA damage-binding protein 1 [Tupaia chinensis]
          Length = 1146

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/821 (52%), Positives = 557/821 (67%), Gaps = 62/821 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSSGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGL------NHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
              Y  L  +Q  L KVIK    +      +   WRSF+ E+KT  A  F+DGDLIESFLD
Sbjct: 1046 SWYNLLLDMQNRLNKVIKRCFQISPNSLTDMSTWRSFHTERKTEPATGFIDGDLIESFLD 1105

Query: 744  LSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 774
            +SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1106 ISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1146


>gi|443707495|gb|ELU03057.1| hypothetical protein CAPTEDRAFT_148808 [Capitella teleta]
          Length = 1084

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/818 (51%), Positives = 563/818 (68%), Gaps = 63/818 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN++ D  GSYV+V+E + NLGP+VD CVVDLERQGQGQ+VTCSG YK+GSLRI+R
Sbjct: 277  QLVKLNVEADDSGSYVQVMETFTNLGPVVDMCVVDLERQGQGQLVTCSGGYKEGSLRIIR 336

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPF-DTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI+E A+++L GIKGMW LR   D P  D  +V+SF+ +TR+L ++ E E+EETE+ 
Sbjct: 337  NGIGIHEHATIDLPGIKGMWPLR--VDSPTQDDMIVLSFVGQTRVLLLSGE-EVEETELG 393

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF +  QT FC +  ++QL+Q+T+ SVRLV   +++L +EW+ P G +++VA  N  QV+
Sbjct: 394  GFEADQQTFFCGNVAHSQLLQITAASVRLVDPRTKKLLSEWRPPSGKNLSVAGCNHCQVV 453

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A     +  L+I  G L       +E+E++C+DI P+ +    SQ+ AVG+WTDIS RI
Sbjct: 454  CAVSR-EVFCLDIQQGALILQGSTTMEHEVACVDITPLNDESGPSQLCAVGLWTDISARI 512

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP L  + +E LGGEIIPRS+LL  FEG++Y+LCALGDG L  F L   TG L+DRKK
Sbjct: 513  LQLPSLEQLHQEMLGGEIIPRSILLATFEGVNYVLCALGDGALFYFHLQPSTGVLSDRKK 572

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  LRTF S  TT+VFA SDRPTV+YSSN KL++SNVNLKEV++MCP NS  +P
Sbjct: 573  VTLGTQPTVLRTFKSPGTTNVFACSDRPTVVYSSNHKLVFSNVNLKEVNYMCPLNSEGYP 632

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-------- 420
            DSLA+A +  LTIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +L++        
Sbjct: 633  DSLALANDCTLTIGTIDEIQKLHIRNVPLGETPRRIAYQEASQTFGVITLRSDLQDSNGS 692

Query: 421  -------------------------------QSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                                            +  +E E+H + +LD  TFE + ++ L 
Sbjct: 693  TPARPSASTQALSTSSSSNVKVMAASNANTEHTFGDEVEVHSLLVLDQHTFEVLHSHQLM 752

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
             +E+  +++S  F +D   YY VGTA V PEE EP +GRI+VF   DGKL  +AEKE KG
Sbjct: 753  QYEFATALMSGRFGEDPTTYYVVGTAMVYPEEAEPKQGRIIVFRFHDGKLTQVAEKEIKG 812

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            A Y+L  FNGKLLA+IN  ++L++W       +EL+ EC +  +I+ALY++T+GDFI+VG
Sbjct: 813  AAYTLTEFNGKLLASINSTVRLFEWT----AEKELRVECSYFNNIIALYLKTKGDFILVG 868

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            DLM+S++LL YK  EG  EE ARDYN NWM+++++LDDD +LGAEN+FN+FT +K+S   
Sbjct: 869  DLMRSVTLLSYKPMEGCFEEIARDYNPNWMTSIDVLDDDTFLGAENSFNIFTCQKDSAAT 928

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIAS 686
            TDEER  L+ VG YHLGEFVN FRHGSLVM+ P       PT   V+FGTVNG +G++  
Sbjct: 929  TDEERQHLQEVGLYHLGEFVNVFRHGSLVMQHPGECTS--PTQGSVLFGTVNGALGLVTQ 986

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
            LP E YLFL ++Q  L K IK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDLSR
Sbjct: 987  LPQEFYLFLLEVQNKLAKTIKSVGKVEHAFWRSFHTERKTEPATGFIDGDLIESFLDLSR 1046

Query: 747  TRMDEISKTMNV----------SVEELCKRVEELTRLH 774
             +M E+ + + +          +V++L K +EELTR+H
Sbjct: 1047 DKMQEVVQGLQMDDGSGMKREAAVDDLVKMIEELTRIH 1084


>gi|81868411|sp|Q9ESW0.1|DDB1_RAT RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|9843869|emb|CAB89874.2| damage-specific DNA binding protein 1 [Rattus norvegicus]
          Length = 1140

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/815 (51%), Positives = 555/815 (68%), Gaps = 56/815 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            Q +KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QPVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPRAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLD+ P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDVTPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGT+++IQKLHIR++P+ E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANTSTLTIGTMNEIQKLHIRTVPIYESPRKICYQEVSQCFGVLSTRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSAAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF    GKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSGGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+ GTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLLGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKM 1105

Query: 750  DEISKTMN----------VSVEELCKRVEELTRLH 774
             E+   +            + ++L K VEELTR+H
Sbjct: 1106 QEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1140


>gi|145351726|ref|XP_001420218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580451|gb|ABO98511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1120

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/776 (54%), Positives = 559/776 (72%), Gaps = 17/776 (2%)

Query: 10   QLIKLN-----LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            QLIKL+     +  D   +YV++LE + NLGPIVDF  VDLER GQGQVVTCSGA KDGS
Sbjct: 348  QLIKLHAEKTSIDKDGNPTYVQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGALKDGS 407

Query: 65   LRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM--NLEDEL 122
            LR+VRNGIGI+EQA ++L G+KG++SLR S D   D +LVV+FI+ETRIL    +  D L
Sbjct: 408  LRVVRNGIGIDEQAVIQLPGVKGLFSLRDSDDSQMDKYLVVTFINETRILGFVGDEGDTL 467

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            +ETEI GF ++ QTL C +   N  +QVT   VRLVS    +L +EWK   G  +  A  
Sbjct: 468  DETEIAGFDAEAQTLCCGNMQGNVFLQVTHRGVRLVSRGG-DLLDEWKPKDGAEILSAKC 526

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
            N +Q+L+A  GG L  L +  G +  +     E EI+CLD  P+G+  S S + AVG+W+
Sbjct: 527  NPTQILVAAAGGQLHCLNVAKGKIVLLASKTFENEIACLDCTPMGDGMS-SPVCAVGLWS 585

Query: 243  DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE 302
             + + + S+ DL++ITKE    +IIPRS LLC+FE I YL   LGDG L+ ++L+  TG 
Sbjct: 586  -MDIVLASMSDLSVITKESTDEDIIPRSTLLCSFEDIPYLFVGLGDGQLITYVLDQNTGA 644

Query: 303  LTDRKKVSLGTQPITLRTFSS--KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            L+ RKK+SLGT+PITL+TF S   N + VFAASDRPTVI+S+NKKL+YSNVN++EV H+C
Sbjct: 645  LSGRKKLSLGTKPITLQTFKSHATNVSSVFAASDRPTVIFSNNKKLIYSNVNVQEVLHVC 704

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
            PF+S AFPD+LA+A + +LTIG IDDIQKLHIR+IPLG HPRRI HQ  + TFA+ ++++
Sbjct: 705  PFSSEAFPDALALAGDEDLTIGGIDDIQKLHIRTIPLGGHPRRIAHQVDTNTFAV-AVEH 763

Query: 421  QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 480
                 + E+ F+RL+DD +F+ +  + L+  E   S++SCSF+ DS  YY VGT +   +
Sbjct: 764  LMSKGDQEL-FIRLIDDGSFDTLHQFRLEEHELASSLMSCSFAGDSREYYVVGTGFAYEQ 822

Query: 481  ENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 540
            E+EP++GRILV  VE   L+L++EKE +GAVY+LNAF GKLLA IN K++L+KW  R+D 
Sbjct: 823  EDEPSRGRILVLRVEADALELVSEKEVRGAVYNLNAFKGKLLAGINSKLELFKWTPREDD 882

Query: 541  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 600
              EL SEC HHG I+   V+TRGD+I+VGDL+KS+SLL YK EEGAI+E ARD+NANWM+
Sbjct: 883  AHELVSECSHHGQIITFSVKTRGDWILVGDLLKSMSLLQYKPEEGAIDEIARDFNANWMT 942

Query: 601  AVEILDDD-IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
            AV +LDDD  YLGAEN+ NLFTV +N    TDEER RLE+ GEYHLGEFVN F  GSLVM
Sbjct: 943  AVAMLDDDETYLGAENSLNLFTVARNMNAMTDEERSRLEITGEYHLGEFVNVFSPGSLVM 1002

Query: 660  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 719
             L D D  ++PT++FGT NGVIGV+ASLP + Y F E+LQT++ K I+GVGGL H +WRS
Sbjct: 1003 SLKDGDSLEVPTLLFGTGNGVIGVLASLPKDAYDFAERLQTSMNKHIQGVGGLKHAEWRS 1062

Query: 720  FNN--EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            F +   +K+  ++NF+DGDL+ESFLDL   + D ++  M     E+ +RVEEL RL
Sbjct: 1063 FRHTLRRKSDPSRNFVDGDLVESFLDLKVEQADVVAADMKCDRAEIIRRVEELQRL 1118


>gi|449283451|gb|EMC90093.1| DNA damage-binding protein 1 [Columba livia]
          Length = 1140

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/826 (52%), Positives = 557/826 (67%), Gaps = 67/826 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 321  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 380

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 381  NGIGIHEHASIDLPGIKGLWPLRSDAHRETDNMLVLSFVGQTRVLMLNGE-EVEETELTG 439

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 440  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSSQVVV 499

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YLEI    L ++   ++E+E++CLDI P+G+    S + A+G+WTDIS RI 
Sbjct: 500  AVGRA-LYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNGMSPLCAIGLWTDISARIL 558

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F L+++TG L+DRKKV
Sbjct: 559  RLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKV 618

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 619  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 678

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 679  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGT 738

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 739  TALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 798

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 799  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGA 858

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 859  VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 914

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 915  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 974

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG  HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 975  DEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1034

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNH---------EQW--RSFNNEKKTVDAKNFLDGDLI 738
              Y  L  +Q  L KVIK VG + H           W  +SF+ E+KT  A  F+DGDLI
Sbjct: 1035 SWYNLLLDMQNRLNKVIKSVGKIEHSLYPSLVQLRAWASQSFHTERKTEPATGFIDGDLI 1094

Query: 739  ESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 774
            ESFLD+SR +M E+   + +          +V++L K VEELTR+H
Sbjct: 1095 ESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH 1140


>gi|301121252|ref|XP_002908353.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
 gi|262103384|gb|EEY61436.1| DNA damage-binding protein, putative [Phytophthora infestans T30-4]
          Length = 1150

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/828 (52%), Positives = 559/828 (67%), Gaps = 64/828 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN   D  GSY+EVL+ YVN+GPI+DFCV+DL+RQGQGQ+VTCSGA KDG+LR++R
Sbjct: 324  QLIKLNADRDETGSYIEVLDSYVNVGPIIDFCVMDLDRQGQGQIVTCSGADKDGTLRVIR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS EL GIKGMW+LR +     D FL+ S++SE RILA+  EDE+EE EI  
Sbjct: 384  NGIGINEQASAELPGIKGMWALRETFAAEHDKFLLQSYVSEVRILAIGDEDEMEEKEIPA 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  +TL C +   +  +QVT   VRL+S +S  L + W    G  + VA AN +QV +
Sbjct: 444  F-TNVKTLLCRNMYGDYWLQVTESEVRLISCSSFSLSSTWSPASGSRITVAAANPTQVAV 502

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI-------------GENPSY---- 232
            AT GG LVYLEI +G + E    ++E+E++C+DI P+             G +  +    
Sbjct: 503  ATSGGVLVYLEIENGQVVEKTTVKMEHELACVDITPLTSSGAGDGDVAMTGSSTHWDMAA 562

Query: 233  --SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGH 290
              S +  VG+WT  SV +  LP L   T E LG +++PRSVL   FEG  YLL  LGDG 
Sbjct: 563  LRSTLCVVGLWTSFSVCVLQLPTLEKRTTEALGTDLLPRSVLCNTFEGKDYLLVGLGDGS 622

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
            L+N+ L+++ G L  RK+VSLG+QP++L TF SKN THVFAA DRPTVIYS+N KLLYSN
Sbjct: 623  LMNYELDVQQGALGTRKRVSLGSQPLSLSTFRSKNMTHVFAACDRPTVIYSNNNKLLYSN 682

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            +N KEV+ MCPF+S +FP+ LA++ E ELTIGT+DDIQKLHI++  L E  RRI H  +S
Sbjct: 683  INSKEVNVMCPFDSESFPECLALSSEEELTIGTVDDIQKLHIQTFHLNEWARRIAHDPES 742

Query: 411  RTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS-- 466
             T  +   S       EE +  FVRL DDQTFE + +Y LD FE  CS++ C  + DS  
Sbjct: 743  HTLGVLTVSFTVDDTGEEVDQGFVRLFDDQTFEVLHSYRLDPFETPCSVVVCPLAGDSVN 802

Query: 467  NVYYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQLIAEKETKGAVYSLNAFNGKLL 522
              Y+ VGTAY+  EE EP +GRILVF V     + KLQL+ EKE KGAVY LN+FNGK+L
Sbjct: 803  ASYFVVGTAYIHEEEAEPHQGRILVFAVTGIHGERKLQLVTEKEVKGAVYCLNSFNGKVL 862

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
            A +N K QLYKW    D  +EL SECGH+GH L LY+++RGDFIVVGDLMKSISLL YK 
Sbjct: 863  AGVNSKAQLYKWSENTDNEKELVSECGHYGHTLVLYMESRGDFIVVGDLMKSISLLSYKQ 922

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 642
             +G IEE A+D N+NWMSAV I+DDD Y+G+E +FNLFTV++NS  A+DEERGRLE VGE
Sbjct: 923  LDGTIEEIAKDLNSNWMSAVGIVDDDTYIGSETDFNLFTVQRNSGAASDEERGRLETVGE 982

Query: 643  YHLGEFVNRFRHGSLVMR--------------------------LPDSDVGQIPTVIFGT 676
            +HLGEFVNRFR+GSLVM+                           P + V Q  +++FGT
Sbjct: 983  FHLGEFVNRFRYGSLVMQNSSSTSQTPSGVVSTGPTAMVDVGESAPAAPVVQNQSMLFGT 1042

Query: 677  VNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
            V+G+IGVI  +  +QY FL ++Q  L  V+KGVGG +H+ WR+F N +   +A+NF+DGD
Sbjct: 1043 VSGMIGVILPISKDQYSFLLRVQQALTHVVKGVGGFSHKDWRTFENRRSVSEARNFIDGD 1102

Query: 737  LIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 774
            L+ESFLDL + +M ++   +N           +VE+L  R+EEL +LH
Sbjct: 1103 LVESFLDLPKPQMTKVVDKLNSDGMLDGTDQFTVEDLTLRIEELVQLH 1150


>gi|260790329|ref|XP_002590195.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
 gi|229275385|gb|EEN46206.1| hypothetical protein BRAFLDRAFT_128289 [Branchiostoma floridae]
          Length = 1152

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/828 (51%), Positives = 563/828 (67%), Gaps = 70/828 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN+  D  GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGAYK+GSLRI+R
Sbjct: 332  QLIKLNVDADDSGSYVHVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAYKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W L    +   D  LV++F+ +TR+L ++ E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGIWPLCVDPNGTMDDTLVLAFVGQTRVLLLSGE-EVEETELPG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC + +  QL+Q+T+ SVRLVS  +++L +EWK P   +++VA++N +QV+ 
Sbjct: 451  F-EDKQTFFCGNVMGGQLLQITAASVRLVSRQTKQLVSEWKPPSEKNISVASSNTTQVVC 509

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   + Y+EI +G L ++    +  E++CLD+ P+ E    + + AVG+WTDIS  + 
Sbjct: 510  AVGQ-VVYYIEIHEGELKQLGETVMAREVACLDVTPLVEGSDRAHLCAVGLWTDISAHML 568

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE------L 303
             LP+L  +  E LGGEIIPRS+L+  FEGI YLLCALGDG L  F LN +TG+      L
Sbjct: 569  QLPNLEPMHVEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNLNPETGKNFSLHIL 628

Query: 304  TDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN 363
            T + KV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP N
Sbjct: 629  TIKSKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLN 688

Query: 364  SAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-- 421
            S  +PDSLA+  +  LTIGTID+IQKLHIR++PL E PRRI +QE S+TF + S + +  
Sbjct: 689  SQGYPDSLALTNDSTLTIGTIDEIQKLHIRTVPLYESPRRIAYQETSQTFGVLSTRTEVE 748

Query: 422  ---------------------------------------SCAEESEMHFVRLLDDQTFEF 442
                                                   +  EE E+H + ++D  TFE 
Sbjct: 749  DASGGSGTQPVRPSASTTALSTSVSPNKNALRSSNDSDGAFGEEIEIHSLLVVDQHTFEI 808

Query: 443  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLI 502
            +  + L   E+  S++SC   DD N Y+ +GTA V PEE+EP  GRI+VF   DGKLQ +
Sbjct: 809  LHAHQLLKDEFALSMVSCKLGDDPNTYFIIGTAMVYPEESEPKSGRIIVFQYTDGKLQQV 868

Query: 503  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 562
            AEKE KGAVYSL  FN KLLA+IN  ++L++W       +EL+ EC H+ +ILALY++T+
Sbjct: 869  AEKEVKGAVYSLVQFNNKLLASINSTVRLFEWT----AEKELRVECNHYNNILALYLKTK 924

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            GDFI+VGDLM+S++LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN+FN FT 
Sbjct: 925  GDFILVGDLMRSVTLLAYKPMEGCFEEIARDFNPNWMSAVEILDDDNFLGAENSFNFFTC 984

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVI 681
            +K+S   TDEER  L+ VG +HLGEFVN FRHGSLVM+ P ++      +V+FGTVNG +
Sbjct: 985  QKDSAATTDEERQHLQEVGHFHLGEFVNVFRHGSLVMQHPGETSTPTQGSVLFGTVNGAV 1044

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 741
            G++  LP + + FL+++Q+ L +VIK VG + H  WRSFN E+KT   + F+DGDLIESF
Sbjct: 1045 GLVTQLPADFFNFLQEVQSKLTRVIKSVGKIEHSFWRSFNTERKTEACQGFIDGDLIESF 1104

Query: 742  LDLSRTRMDEISKTMNV---------------SVEELCKRVEELTRLH 774
            LDLSR +M E+ + + V               +VE+L K VEELTR+H
Sbjct: 1105 LDLSRDKMQEVVQGLQVGGAIMDDGSGMKRECTVEDLIKLVEELTRIH 1152


>gi|325186344|emb|CCA20849.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 1148

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/826 (50%), Positives = 559/826 (67%), Gaps = 62/826 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN + D  GSY+EVL+ YVN+GPI+DFCV+DL+RQGQGQ+VTCSGA KDGSLR++R
Sbjct: 324  QLVKLNSKRDESGSYIEVLDSYVNIGPIIDFCVMDLDRQGQGQIVTCSGADKDGSLRVIR 383

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGINEQAS EL GIKGMW+LR S    +D +LV S+++E RI+ +   DE+EE EIE 
Sbjct: 384  NGIGINEQASAELPGIKGMWALRESLASEYDKYLVQSYLNEIRIMTIGDSDEMEEVEIEA 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    +TL+C +   +  +QVT   VR++ + +  +   W  PP   + VA+AN +Q++L
Sbjct: 444  FL-DAKTLYCRNVNEDGWLQVTETEVRIIDAQTTSICCGWIPPPSTRITVASANPTQIVL 502

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI----------------------- 226
            AT    L+Y+EI D  L E    ++E+EI+C+D++P                        
Sbjct: 503  ATSSKVLIYMEILDKQLMEKARKEMEFEIACIDLSPRLDQIDPPALTRSSQVMDEAMEDA 562

Query: 227  ----GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYL 282
                  N   + I AVG WT  SV + SLP L+ ++KE    +++PRSVL  +FE   YL
Sbjct: 563  IVSRDANALRTSICAVGFWTSSSVCVLSLPSLDELSKETFDKDLLPRSVLCASFEDSDYL 622

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
            L  LGDG L+   L+ + G L++RK++SLGTQPI+L  F SK+  HVFA+ DRPTVIY +
Sbjct: 623  LIGLGDGSLVTCHLDREFGTLSERKRISLGTQPISLSAFWSKDKLHVFASCDRPTVIYYN 682

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 402
             KKLLYSNVN KEV+ M  F+S  FP+ LA+A   ELTIGT+DDIQKLHI+S  L E  R
Sbjct: 683  KKKLLYSNVNAKEVAVMSTFHSEVFPECLALASGSELTIGTVDDIQKLHIQSFHLNEWAR 742

Query: 403  RICHQEQSRTFAICSLK--NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC 460
            RI H  +SRT  + ++K       +E E  ++RL DDQTFE + ++ LD FE  CSI++C
Sbjct: 743  RIAHDSRSRTLGVATVKLSKDDGGDEVEQGYIRLFDDQTFECLKSFRLDPFESPCSIITC 802

Query: 461  SFSDDSN--VYYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQLIAEKETKGAVYSL 514
             F+ DS+   YY VGTA+V  EE EP +GRILVF V     D +LQL+ EKE KG+VY L
Sbjct: 803  IFTGDSSGGTYYVVGTAFVHEEEAEPHQGRILVFTVSGIHGDRRLQLVTEKEVKGSVYCL 862

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            NAFNGKLLA +N K+ L+KW   ++   EL SECGHHGH L LY+++RGDFIVVGDLMKS
Sbjct: 863  NAFNGKLLAGVNSKVYLFKWSESEENGEELVSECGHHGHTLVLYMESRGDFIVVGDLMKS 922

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 634
            ISLL +K  +G+IEE ARD N+NWM+AV I+DDD Y+G+E +FNLFTV++NS  A+DEER
Sbjct: 923  ISLLNHKQLDGSIEEIARDLNSNWMTAVGIIDDDNYVGSETDFNLFTVQRNSGAASDEER 982

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP-------------------TVIFG 675
            GRLE +GEYHLGEFVNRFR+GSLVM+   S   + P                   +++FG
Sbjct: 983  GRLETIGEYHLGEFVNRFRYGSLVMQHNLSIGAEAPGISLSDDRPESLSPLSVQRSMLFG 1042

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            TV+G+IGVI  +  E++ FL ++Q+ L +VI+GVGG +H +WR+F N + +++A NF+DG
Sbjct: 1043 TVSGMIGVILPISKEKHEFLMRVQSALNQVIQGVGGFSHSEWRTFENRRSSIEAHNFIDG 1102

Query: 736  DLIESFLDLSRTRMDEISKTMN-------VSVEELCKRVEELTRLH 774
            DLIESFLDLS+  M ++   +N        ++E L  R+EEL+++H
Sbjct: 1103 DLIESFLDLSKDEMKQVVDELNRDQLEGKTTLEALAARIEELSQMH 1148


>gi|351699158|gb|EHB02077.1| DNA damage-binding protein 1 [Heterocephalus glaber]
          Length = 1144

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/819 (51%), Positives = 551/819 (67%), Gaps = 60/819 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS+     D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSAPSRETDDTLVLSFVGQTRVLMLNGE-EVEETELVG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G + +VA+ ++SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNNSVASGSSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++   ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPRELRQISQTEMEHEVACLDITPLGDSSGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  QLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   D + ++ +    KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDEEREVSSRGLVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWR----SFNNEKKTVDAKNFLDGDLIESFLDLS 745
              Y  L  +Q  L KVIK VG + H  +     SF+ E+KT  A  F+DGDLIESFLD+S
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEHSLYPSRAVSFHTERKTEQATGFIDGDLIESFLDIS 1105

Query: 746  RTRMDEISKTMN----------VSVEELCKRVEELTRLH 774
            R +M E+   +            + ++L K VEELTR+H
Sbjct: 1106 RPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1144


>gi|242010743|ref|XP_002426118.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
 gi|212510165|gb|EEB13380.1| DNA damage-binding protein, putative [Pediculus humanus corporis]
          Length = 1148

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/825 (49%), Positives = 554/825 (67%), Gaps = 70/825 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN  PD  G YV ++E + NL PI+D  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 334  QLVKLNTSPDENGYYVTIMEAFTNLAPILDMVVVDLERQGQGQLVTCSGAFKEGSLRIIR 393

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E A+++L GIKGMW+LR+S D  +D  +V++F+ +TRIL +N E E+EETEI G
Sbjct: 394  NGIGIQEHATIDLLGIKGMWALRASLDSVYDNTIVLAFVGQTRILTLNGE-EVEETEIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S  Q+ +C +   N ++Q+T    RL+S  +++L +EW+ P G +++V   N  Q + 
Sbjct: 453  FLSDQQSFYCGNVENNNMIQLTPTCARLISVETKQLVSEWRPPAGKTISVVACNTVQAIC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A  G  L YLEI    L +  +  LEYE++CLDI P+ E    + I AVG+WTDIS RI 
Sbjct: 513  A-AGSDLYYLEILKNELVQKGNTTLEYEVACLDITPLSEGGKTADIIAVGLWTDISARIL 571

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LPDL  + +E+LGGEIIPRS+L+  FE I+YLLCALGDG +  F LN + G L+D+KKV
Sbjct: 572  KLPDLEELNREYLGGEIIPRSILMTCFENINYLLCALGDGSMFYFSLNNQNGILSDKKKV 631

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  NS A+PD
Sbjct: 632  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNSEAYPD 691

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE ++TF + +++          
Sbjct: 692  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQETTQTFGVITMRMDVHQRSGLI 751

Query: 420  --NQSCA---------------------------------EESEMHFVRLLDDQTFEFIS 444
               QS +                                 +E E+H + ++D  TFE + 
Sbjct: 752  PVKQSASTQAQSISSSSNIGGAHNLKSGPAASINSFAEFGQEVEVHNLLVIDQHTFEVLH 811

Query: 445  TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAE 504
             +     EY  S++S    DD N YY VGTA V P+E+E  +GRIL+F  ++GKL  +AE
Sbjct: 812  AHQFMQSEYALSLISTKLGDDPNTYYIVGTAMVNPDESESKQGRILIFQFQEGKLYQVAE 871

Query: 505  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
            KE KGA YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I++LY++T+GD
Sbjct: 872  KEIKGAAYSLVEFNGKLLASINSTVRLFEWT----AEQELRLECSHFNNIISLYLKTKGD 927

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
            FI+VGDL++S++LL YK  EG  EE ARD+N NWM+AVEI+DDD +LGAEN+FNLF  +K
Sbjct: 928  FILVGDLIRSMTLLQYKTMEGCFEEMARDHNPNWMTAVEIIDDDTFLGAENSFNLFVCQK 987

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNG 679
            +S  ATDEER ++  VG +HLG+ VN FRHGSLVM+    +VG+  T     ++FGTV+G
Sbjct: 988  DSAAATDEERQQMHAVGMFHLGDMVNVFRHGSLVMQ----NVGETSTPTTGCILFGTVSG 1043

Query: 680  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
             IG++  +    Y FL +L+  L +VIK VG + H  WRSF  E KT     F+DGDLIE
Sbjct: 1044 AIGLVTQISANFYNFLHELECKLTEVIKSVGKIKHSFWRSFTTEIKTEPCDGFIDGDLIE 1103

Query: 740  SFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 774
            SFLDLS  +M E++  + +          +V++L K VE+LTR+H
Sbjct: 1104 SFLDLSHEKMKEVAAGLQIDNGSGMKQEATVDDLVKMVEDLTRIH 1148


>gi|91087281|ref|XP_975549.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
            castaneum]
 gi|270010588|gb|EFA07036.1| hypothetical protein TcasGA2_TC010010 [Tribolium castaneum]
          Length = 1149

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/824 (49%), Positives = 561/824 (68%), Gaps = 65/824 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  +P+  GSYV V+E + NL PI+D CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLTTKPNESGSYVTVMESFTNLAPILDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+ ++D  +D  LV++F+ +TR+L++N E E+EET+I G
Sbjct: 392  NGIGIQEHASIDLPGIKGMWALQVASDGRYDNTLVLAFVGQTRVLSLNGE-EVEETDIAG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S  QT FC + I+ Q+VQ+T  S RL+S+ ++ L  EWK P   ++ V   N  Q+++
Sbjct: 451  FASDQQTFFCGNVIHEQIVQITPISARLISAQNKTLLAEWKPPSDKNIAVVACNTCQIVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            +TG   L Y+EI    L       L+ E++CLDI+P+G+  + S+  AVG+WTDI+ RI 
Sbjct: 511  STGS-ILYYIEIHQNELIMKGVTTLDVEVACLDISPLGDGVTTSEYIAVGLWTDITARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             +PDL+  TKE+LGGEIIPRSVL+  FEG SYLLCALGDG +  F+ +  TG L+D+K+V
Sbjct: 570  RIPDLSEATKEYLGGEIIPRSVLMTCFEGHSYLLCALGDGSMFYFVFHKDTGTLSDKKRV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVN+KEV+HMC  N+ A+PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNMKEVNHMCSLNAEAYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
            SLA+A +  +TIGTID+IQKLHIR++PL E P+RI +QE+S+TF + + +          
Sbjct: 690  SLALATDSSVTIGTIDEIQKLHIRTVPLQESPKRIAYQEESQTFGVLTARIDIQDSTGLN 749

Query: 422  ---------------------------------------SCAEESEMHFVRLLDDQTFEF 442
                                                      +E E+H + ++D  TFE 
Sbjct: 750  PARPSASTMAQSTTSSSSVGSLSMSKSGSSSLIGGNIIPDYGQEVEVHNLLIIDQHTFEV 809

Query: 443  ISTYPLDTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQL 501
            +  + L   EY  SI+S +    D N YY VGTA V PEE+EP +GRIL+F   D KL  
Sbjct: 810  LHAHQLMQQEYAMSIISTNRLGGDMNEYYIVGTATVNPEESEPKQGRILIFQWNDNKLTQ 869

Query: 502  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 561
            ++EKE KGA YSL  FNGKLLA+IN  ++L++W +     +EL+ EC H  +IL L+++T
Sbjct: 870  VSEKEIKGACYSLAEFNGKLLASINSTVRLFEWTVE----KELRLECSHFNNILTLFLKT 925

Query: 562  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            +GDFI++GDLM+S++LL YK  EG+ EE ARDYN NWM+AVEILDDDI+LGAEN+FN+F 
Sbjct: 926  KGDFILLGDLMRSMTLLQYKTMEGSFEEIARDYNPNWMTAVEILDDDIFLGAENSFNIFV 985

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGV 680
             +K+S   TDEER ++  VG +H+G+ +N FRHGSLVM+ L ++       V+FGTV+G 
Sbjct: 986  CQKDSAATTDEERSQMHEVGRFHVGDMINVFRHGSLVMQNLGETSTPTTGCVLFGTVSGA 1045

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            IG++  +  + Y FL +LQ  L  VIK VG ++H QWR+FN + KT  ++ F+DGDLIES
Sbjct: 1046 IGLVTQITQDFYDFLLELQNKLSTVIKSVGKIDHSQWRAFNTDIKTEPSEGFIDGDLIES 1105

Query: 741  FLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 774
            FLDLS  +M E++  + +          +V++L K VE+LTR+H
Sbjct: 1106 FLDLSHDKMKEVADGLQITGEGGMKQDCTVDDLVKMVEDLTRIH 1149


>gi|410045300|ref|XP_508472.4| PREDICTED: DNA damage-binding protein 1 [Pan troglodytes]
          Length = 1107

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/814 (51%), Positives = 535/814 (65%), Gaps = 94/814 (11%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 339  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 398

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 399  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 457

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 458  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 517

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 518  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 576

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 577  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 636

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 637  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 696

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 697  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 756

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 757  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 816

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 817  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 876

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 877  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 932

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 933  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 992

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
            DEER  L+ VG +HLGEFVN F HGSLVM                               
Sbjct: 993  DEERQHLQEVGLFHLGEFVNVFCHGSLVM------------------------------- 1021

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
                    Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M 
Sbjct: 1022 --------QNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQ 1073

Query: 751  EISKTMN----------VSVEELCKRVEELTRLH 774
            E+   +            + ++L K VEELTR+H
Sbjct: 1074 EVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1107


>gi|320163506|gb|EFW40405.1| UV-damaged DNA binding protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1123

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/748 (53%), Positives = 522/748 (69%), Gaps = 43/748 (5%)

Query: 9    KQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
             QL++L  + D  GS+V VLE + NLGPI D  VVDLERQGQ QVVTCSGA+KDGSLR+V
Sbjct: 375  SQLLRLATERDETGSFVRVLESFSNLGPICDMAVVDLERQGQCQVVTCSGAFKDGSLRVV 434

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNG+GI EQA++EL GIKG+WSL+ +    + + LVVSFI ETR+L M+  +ELEE +I 
Sbjct: 435  RNGVGIEEQATIELPGIKGIWSLKPTEAALYRSILVVSFIGETRLLGMSSGEELEEMQIP 494

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW-------KSPPGYSVNVAT 181
            G    +QTL C +   +Q +QVT+  VRLV+ +++ L   W       +  PG  + +A+
Sbjct: 495  GLDQNSQTLHCANVSGDQFLQVTATEVRLVNCSTQALVASWSPASVPDRYAPGTRITMAS 554

Query: 182  ANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 240
            +N  QVL+A GGGHLV L +   G L  + HA++++EI+C+DI PIG  P  SQ+ AVG+
Sbjct: 555  SNDFQVLVACGGGHLVCLSVEASGNLVPIGHARMDHEIACVDITPIGGQP-LSQVCAVGL 613

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT 300
            WTDI+VR+ S+P L  +  + L G+IIPRS+L+  FEG   LLCALGDG +  +  ++ +
Sbjct: 614  WTDITVRVLSVPTLEQVLVQPLEGQIIPRSILMATFEGQPRLLCALGDGSMHTYSFDVLS 673

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             +LTD K+VSLGTQPI L  F S+  THVFA SDRPTVIYSSN+KLLYSNVNL+EV+H+C
Sbjct: 674  QQLTDHKRVSLGTQPILLSAFVSRGQTHVFACSDRPTVIYSSNRKLLYSNVNLREVTHVC 733

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK- 419
            PF S +F D LA+     LTIGTID+IQKLH+R+IPLGE PRRI + E +RT+ + ++  
Sbjct: 734  PFTSESFADCLAVVSSTSLTIGTIDEIQKLHVRAIPLGEMPRRIAYHEPTRTYGVATVTL 793

Query: 420  -----------NQSCAEES------------------EMHFVRLLDDQTFEFISTYPLDT 450
                       N +   ++                  +  FVRL D QTFE   ++ L +
Sbjct: 794  AEPLPVGSNSGNVAARAQNVRPMAFDDGPRSPSDVLEDTSFVRLFDGQTFEIRDSFQLPS 853

Query: 451  FEYGCSILSCSF---SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
             E   S +SCSF   S DS VY  VGTA+V+P E+EP +GRILVF V  G L L+  K+ 
Sbjct: 854  TETIMSFISCSFANDSSDSTVYLVVGTAFVIPSEDEPKRGRILVFDVAGGALHLVTAKDV 913

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
            KG VYSLNAFNGKLLA IN K+ L+KW L  DG REL SEC HHGHIL LY+++RGDFI+
Sbjct: 914  KGCVYSLNAFNGKLLAGINSKVNLFKWNLTGDGIRELVSECSHHGHILTLYLKSRGDFII 973

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SISLL+YK    +IEE A+D   NW++AV++LDDD+++G E++FN+FT R+N E
Sbjct: 974  VGDLMRSISLLMYKSGTSSIEEIAQDTCPNWVTAVDMLDDDVFIGGESSFNIFTCRRNLE 1033

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIAS 686
             +TDEER RLEVVGE+H+GEF+N+FR GSLVM+LPD     I P+ +FGT NGVIGVIA 
Sbjct: 1034 ASTDEERKRLEVVGEFHVGEFINQFRAGSLVMKLPDEQEQPIQPSTLFGTGNGVIGVIAR 1093

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            L   QY FL+ +Q  + KVIKGVGGLNH
Sbjct: 1094 LTRSQYEFLQLVQAAMAKVIKGVGGLNH 1121


>gi|156389050|ref|XP_001634805.1| predicted protein [Nematostella vectensis]
 gi|156221892|gb|EDO42742.1| predicted protein [Nematostella vectensis]
          Length = 1157

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/833 (49%), Positives = 555/833 (66%), Gaps = 74/833 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL KL+ +PDA GSYV+V+E + NLGPIVD  VVDLERQGQGQ+VTCSGA K+GSLRI+R
Sbjct: 331  QLAKLSTEPDADGSYVQVMETFTNLGPIVDMVVVDLERQGQGQLVTCSGAKKEGSLRIIR 390

Query: 70   NGIGINEQASVELQGIKGMWSLR-SSTDDPFDTFLVVSFISETR---------ILAMNLE 119
            NGIGI+E A+++L GI G+W+L+   T   +D  LV+SF+ ++R         +L+++ E
Sbjct: 391  NGIGIHEHATIDLAGIMGIWALKLRKTQQEYDDTLVLSFVGQSRRVLCTIHSRVLSLSGE 450

Query: 120  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 179
             E+EETEI GF    QT +  +    QL+QVT+ SVRLV+  +R+L +EWK P   +++V
Sbjct: 451  -EVEETEIPGFSDDQQTYYSGNVTGAQLIQVTAASVRLVNCETRQLVSEWKHPSAKNISV 509

Query: 180  ATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            A+ N  QV+ A G   L Y+EI  G L ++    LEYE++CLDI P  E  S + + AVG
Sbjct: 510  ASCNTEQVVAAVGS-ELYYIEIMPGELRQISQVTLEYEVACLDITPTVEGKSRADMVAVG 568

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK 299
            +WTDISVR+  LP LN +  + LGGEIIPRS+L  AFEGI YLLCALGDG L  F ++  
Sbjct: 569  LWTDISVRVLQLPKLNQLHVQMLGGEIIPRSILKTAFEGIHYLLCALGDGTLFYFTMDPS 628

Query: 300  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
            TG L + KKV+LGTQP  LRTF S +T +VFA SDRPTVIYSSN KL++SNVNLKEV+ M
Sbjct: 629  TGALAECKKVTLGTQPTMLRTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVNFM 688

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 419
            CP NS  +PDSLA+A +G LTIGTID+IQKLHIR++PLGE PRRI +QE ++TF + S++
Sbjct: 689  CPLNSQGYPDSLALANDGSLTIGTIDEIQKLHIRTVPLGESPRRIAYQEATQTFGVISVR 748

Query: 420  NQ-------------------------------------------SCAEESEMHFVRLLD 436
             +                                           +  +E E+  + ++D
Sbjct: 749  IEISEPGTSGTVPLHPSASTTAHNVSSSVGTGVSGSASSSAPDGITFGDEMEIGSLLIID 808

Query: 437  DQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED 496
              TFE    + L   E   S++SC+ SDD + YYCVGTAYV PEE EP  GR+L+F + +
Sbjct: 809  QHTFEVTHAHQLHDNEQATSLMSCTLSDDPHTYYCVGTAYVFPEEPEPKAGRLLLFHLSE 868

Query: 497  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 556
            GKL  +AEKE KGAVYSL  FNGK+LA IN  + +++W       +E + EC ++ +ILA
Sbjct: 869  GKLVQVAEKEVKGAVYSLVEFNGKVLAGINSTVSIFEWT----ADKEFRYECSYYDNILA 924

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            LY++T+GDFI+VGDLM+S++LL+Y   EG+ +E A D++  WM+A+EILDDD +LGAEN+
Sbjct: 925  LYLKTKGDFILVGDLMRSMTLLVYLPLEGSFQEIAHDFSPKWMTAIEILDDDTFLGAENS 984

Query: 617  FNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFG 675
            +NLFT  K+S   TDEER  L+  G+YHLGEFVN FRHGSLVM  P D+       V+FG
Sbjct: 985  YNLFTCTKDSGATTDEERYHLQDAGQYHLGEFVNVFRHGSLVMEHPGDASTPFQGCVLFG 1044

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW-----RSFNNEKKTVDAK 730
            TVNG IG++A +  + + FL ++Q  L KVIK VG ++H  +      + ++ +K   A 
Sbjct: 1045 TVNGRIGIVAQIAQDLFNFLIQVQKKLNKVIKSVGKIDHSLYPFPHCSNLSHSRKMEPAH 1104

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELCKRVEELTRLH 774
             F+DGDLIESFLDL R RM+E+   + +         +V++L K VEELTR+H
Sbjct: 1105 GFIDGDLIESFLDLPRARMEEVVTGLQIDDGGMKKECTVDDLVKTVEELTRIH 1157


>gi|58383228|ref|XP_312466.2| AGAP002472-PA [Anopheles gambiae str. PEST]
 gi|55242305|gb|EAA08181.2| AGAP002472-PA [Anopheles gambiae str. PEST]
          Length = 1138

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/813 (48%), Positives = 540/813 (66%), Gaps = 54/813 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN      G+YV ++E + NL PIVD CVVDLERQGQGQ++TCSG++K+GSLRI+R
Sbjct: 332  QLVKLNTTAGDNGAYVMLMETFTNLAPIVDMCVVDLERQGQGQMITCSGSFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI E A ++L GIKGMW+LR   DD P+D  L++SF+  TR+L ++  DE+EETEI 
Sbjct: 392  NGIGIQEHACIDLPGIKGMWALRVGIDDSPYDNTLILSFVGHTRVLMLS-GDEVEETEIA 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            G     QT +C +  + Q++QVT  S RL+S  ++ +  EWK P    + V  AN +Q++
Sbjct: 451  GILGDQQTFYCANVSHGQILQVTPSSARLISCDNKAMICEWKPPDNKRIGVVGANTTQIV 510

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A+    + Y+EIGDG L       L YE++CLD++P+ +N + S+  AVG+WTDIS  +
Sbjct: 511  CASAQ-DVYYVEIGDGKLEYKGQTTLSYEVACLDVSPLEDNATRSEFVAVGLWTDISACV 569

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              +P L L+ KE LGGEIIPRS+L+ AFEGI+YLLCALGDG +  F+LN  TG LT++KK
Sbjct: 570  LKVPTLELLHKEKLGGEIIPRSILMAAFEGINYLLCALGDGSMYYFVLNKATGCLTEQKK 629

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+ 
Sbjct: 630  VTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQ 689

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A    +  GTID+IQKLHIR++PLGE PRRI +QE S+TF + + +         
Sbjct: 690  DSLALATRNSVIFGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITFRMDVQDSSGL 749

Query: 420  ----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                        N    +E E+H + ++D  TFE +  +     
Sbjct: 750  TPARQSASTQTNNITQSSGMGLLKPGASNTEFGQEVEVHNLLIIDQNTFEVLHAHQFMQT 809

Query: 452  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
            EY  S++S    +D N Y+ VGT  V PEE EP  GRI+++   D +L+++++KE KGA 
Sbjct: 810  EYALSLMSAKLGNDPNTYFIVGTGLVNPEEPEPKTGRIIIYRYADNELKMVSDKEVKGAC 869

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
            YSL  FNG++LA IN  ++LY+W   DD  ++L+ EC H  ++LALY +T+GDFI+VGDL
Sbjct: 870  YSLVEFNGRVLACINSTVRLYEWT--DD--KDLRLECSHFNNVLALYCKTKGDFILVGDL 925

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            M+SI+LL YK  EG+ EE ARDY  NWM+AVEILDDD +LGA+N+ NLF   K+S   TD
Sbjct: 926  MRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCLKDSAATTD 985

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
            EER ++  V ++HLG+ VN FRHGSLVM+ + +        V+FGTV+G IG++  +  +
Sbjct: 986  EERQQMPEVAQFHLGDMVNVFRHGSLVMQNISERSTPTTGCVLFGTVSGAIGLVTQIQSD 1045

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
             Y FL KLQ NL   IK VG ++H  WRSF+ E K    + F+DGDL+ESFLDLSR +M 
Sbjct: 1046 FYEFLRKLQENLTNTIKSVGKIDHSYWRSFHTETKMERCEGFIDGDLVESFLDLSREKMR 1105

Query: 751  EISKTMNVSVE---------ELCKRVEELTRLH 774
            E S  + + VE         ++ K VE+LTR+H
Sbjct: 1106 EASLGLEIDVEGTKREATVDDIIKIVEDLTRIH 1138


>gi|157128864|ref|XP_001655231.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882186|gb|EAT46411.1| AAEL002407-PB [Aedes aegypti]
          Length = 1138

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/817 (48%), Positives = 547/817 (66%), Gaps = 62/817 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN      G+YV V+E + NL PI+D C+VDLE+QGQGQ++TCSG+YK+GSLRI+R
Sbjct: 332  QLVKLNTTAGDNGAYVTVMETFTNLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI E A ++L GIKGMW+LR   DD P+D  LV+SF+  TRIL ++ E E+EETEI 
Sbjct: 392  NGIGIQEHACIDLPGIKGMWALRVGIDDSPYDNTLVLSFVGHTRILTLSGE-EVEETEIP 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT +C +  + Q++QVT  + RL+   ++ +  EWK P    ++V   N+ Q++
Sbjct: 451  GFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKSMICEWKPPDDKRISVVACNSCQMV 510

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             AT    + Y+EIG+  L       L+YE++CLDI+P+ +N +++++ AVG+WTDIS  I
Sbjct: 511  CATAC-DIYYIEIGESKLVHKSTVTLDYEVACLDISPLEDNATHAELVAVGLWTDISACI 569

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP+L ++  E LGGEIIPRS+L+  FEGI YLLCALGDG +  F+L+  T  LTD+KK
Sbjct: 570  LRLPNLEVVHTEKLGGEIIPRSILMAHFEGIVYLLCALGDGSMFYFVLDKNTNRLTDQKK 629

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+ 
Sbjct: 630  VTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQ 689

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TF + +++         
Sbjct: 690  DSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRTDIQDSSGL 749

Query: 420  ----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                        N    +E E+H + ++D  TFE +  +     
Sbjct: 750  TPSRQSASTQTTNVTLSTNMGLLKAGASNAEFGQEVEVHNLLIIDQNTFEVLHAHQFMQT 809

Query: 452  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
            EY  S++S    +D N YY VGTA V PEE EP  GRI+++   DG L  ++EKE KG+ 
Sbjct: 810  EYAMSLISAKLGNDPNTYYIVGTALVNPEEPEPKVGRIIIYHYADGNLTQVSEKEIKGSC 869

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
            YSL  FNG++LA+IN  ++LY+W   DD  ++L+ EC H  ++LALY +T+GDFI+VGDL
Sbjct: 870  YSLVEFNGRVLASINSTVRLYEWT--DD--KDLRLECSHFNNVLALYCKTKGDFILVGDL 925

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            M+SI+LL YK  EG+ EE ARDY  NWM+AVEILDDD +LGA+N+ NLF   K+    TD
Sbjct: 926  MRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCLKDGAATTD 985

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ--IPT---VIFGTVNGVIGVIAS 686
            +ER ++  V + HLG+ VN FRHGSLVM     ++G+   PT   V+FGTV+G IG++  
Sbjct: 986  DERQQMPEVAQVHLGDMVNVFRHGSLVME----NIGERTTPTSGCVLFGTVSGAIGLVTQ 1041

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
            +P + Y FL KLQ NL   IK VG ++H  WRSF+ E KT   + F+DGDL+ESFLDLSR
Sbjct: 1042 IPADYYEFLRKLQENLTDTIKSVGKIDHAYWRSFHTEMKTERCEGFIDGDLVESFLDLSR 1101

Query: 747  TRMDEISKTMNV---------SVEELCKRVEELTRLH 774
             +M E +  + +         +V+++ K VE+LTR+H
Sbjct: 1102 EKMHEAALGLQIDVDGTKKEATVDDIIKIVEDLTRIH 1138


>gi|321478515|gb|EFX89472.1| hypothetical protein DAPPUDRAFT_303245 [Daphnia pulex]
          Length = 1158

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/834 (49%), Positives = 548/834 (65%), Gaps = 76/834 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+ PD   SYV V+E + NL PIVD  +VDL+RQGQGQ+VTCSGAYK+GSLRI+R
Sbjct: 332  QLVKLNVTPDDNNSYVTVMETFTNLAPIVDMTIVDLDRQGQGQLVTCSGAYKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
            NGIGI+EQAS++L GIKG+W+L+  SS +   D  +V+SF+ +TR+L +N E E+EETEI
Sbjct: 392  NGIGIHEQASIDLPGIKGIWALKMGSSGNPSVDDTVVLSFVGQTRVLMLNGE-EMEETEI 450

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             G  +  QT FC +   + ++Q+T+GSVRL+S  +++  +EW  P G  +NV   N  QV
Sbjct: 451  PGLTADQQTFFCGNVGKDSVLQITTGSVRLISVNTKQKLSEWTPPDGKMLNVVACNHGQV 510

Query: 188  LLATGGGHLVYLEIGDGILTEVK-HAQLEYEISCLDINPIG------ENPSYSQIAAVGM 240
            L A  G  L YLE+ D     +K H  L+YE++CLD+ PI          S +++ AVG+
Sbjct: 511  LCA-AGRELYYLEMEDDTQVVLKTHVTLDYEVACLDLTPISIGSQQNTTVSKAEVCAVGL 569

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT 300
            WTDIS R+  LP L    KE LGGEIIPRS+L+  FEG  YLL ALGDG L  F +N  T
Sbjct: 570  WTDISARLLKLPTLEEFHKEPLGGEIIPRSILMALFEGTPYLLVALGDGSLFYFSMNPVT 629

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
              L DRKKV+LGTQP  LR F S++T +VFA SDRPTVIYSSN KL++SNVNLKEV+HMC
Sbjct: 630  KLLGDRKKVTLGTQPTVLRPFRSQSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVAHMC 689

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK- 419
            P NS A+PDSL +A +  +TIGTID+IQKLHIR++PLGE PRRI +QE ++TF + + + 
Sbjct: 690  PLNSEAYPDSLVLATDTAVTIGTIDEIQKLHIRTVPLGESPRRIAYQENTQTFGVITSRV 749

Query: 420  --------------------------------------NQSC--------AEESEMHFVR 433
                                                    SC         +E E++ + 
Sbjct: 750  DIVESSGLTPARQSASTQAQSVSSSSSLGSAIKAPVSTRDSCGSGGGAEIGQEIEVYNLL 809

Query: 434  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 493
            ++D  +F  +  +     EY  SI+S    DD N YY VGTA V+PEE+EP +GRI++F 
Sbjct: 810  IVDQHSFAVLHAHQFMQNEYALSIVSTRLGDDVNPYYVVGTALVVPEESEPKQGRIVLFQ 869

Query: 494  VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
              DGKL  +AEKE KGA YSL  FN K+LAAIN  ++LY+W       +EL+ EC +  H
Sbjct: 870  WADGKLTTVAEKEVKGACYSLVDFNSKILAAINNVVRLYEWT----AEKELRLECSNFNH 925

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
            I+ALY++ +GDFI+VGDLM+SI+LL YK  EG+ EE ARD N NWMSAVEILDDD +LGA
Sbjct: 926  IIALYLKRKGDFILVGDLMRSITLLQYKTMEGSFEEMARDSNPNWMSAVEILDDDTFLGA 985

Query: 614  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-- 671
            EN+FNLF  +K+S   T+EER +L  VG +HLG+ VN FRHGSLVM    ++    PT  
Sbjct: 986  ENSFNLFVCQKDSAATTEEERQQLTEVGRFHLGDMVNVFRHGSLVMDHA-AETLTTPTQG 1044

Query: 672  -VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
             V+FGTV+G IGV+  LP E Y FL ++QT + +VIK VG + H  WRSF  E+K    +
Sbjct: 1045 CVLFGTVHGAIGVVTQLPSEFYHFLSEVQTRMARVIKPVGKIEHSFWRSFATERKVEPCE 1104

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCKRVEELTRLH 774
             F+DGDLIESFLDLS  +M E++  + +          +VE++ K +E+LTR+H
Sbjct: 1105 GFIDGDLIESFLDLSSDKMKEVATGLQMDDGSGMKREATVEDIIKLIEDLTRIH 1158


>gi|170057515|ref|XP_001864517.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876915|gb|EDS40298.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1138

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/817 (48%), Positives = 546/817 (66%), Gaps = 62/817 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN    A G+YV V+E + NL PI+D C+VDLERQGQGQ++TCSG+YK+GSLRI+R
Sbjct: 332  QLVKLNTTAAASGAYVTVMETFTNLAPIIDMCIVDLERQGQGQMITCSGSYKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI E A ++L GIKGMW+LR   DD P+D  LV+SF+  TRIL ++ E E+EETEI 
Sbjct: 392  NGIGIQEHACIDLPGIKGMWALRVGIDDSPYDNTLVLSFVGHTRILMLSGE-EVEETEIP 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT +C +  + Q++QVT  + RL+S  ++ +  EWK P    + V   N+ Q++
Sbjct: 451  GFLSDQQTFYCANVDFGQIIQVTPMTARLISCDNKSMICEWKPPDDKRIGVVACNSCQMV 510

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             AT    + Y+EI  G L       L+YE++CLDI+P+ E  + S++ AVG+WT+IS  I
Sbjct: 511  CATAR-DIYYIEIEAGKLVHKSTVTLDYEVACLDISPLDEPATRSELVAVGLWTEISACI 569

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LP+L  + KE LGGEIIPRS+L+  FEGI YLLCALGDG +  F+++  T  LTD+KK
Sbjct: 570  LRLPNLEFVHKEKLGGEIIPRSILMACFEGIIYLLCALGDGSMFYFVVDKTTHRLTDQKK 629

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++ 
Sbjct: 630  VTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYQ 689

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TF + +++         
Sbjct: 690  DSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRMDIQDSSGL 749

Query: 420  ----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                        N    +E E+H + ++D  TFE +  +     
Sbjct: 750  TPSRQSASTQTSNVTSSSNMGLLKPGASNTEFGQEVEVHNLLIIDQNTFEVLHAHQFMQT 809

Query: 452  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
            EY  S++S    +D   YY VGTA V PEE EP  GRI+++   DG L  ++EKE KGA 
Sbjct: 810  EYVLSLISAKLGNDPATYYIVGTAMVNPEEREPKVGRIIIYHYADGALTQVSEKEIKGAC 869

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
            YSL  FNG++LA IN  ++LY+W   DD  ++L+ EC H  ++LALY +T+GDFI+VGDL
Sbjct: 870  YSLVEFNGRVLATINSTVRLYEWT--DD--KDLRLECSHFNNVLALYCKTKGDFILVGDL 925

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            M+SI+LL YK  EG+ EE ARDY   WM+AVEILDDD +LGAEN+ NLF   K+S   TD
Sbjct: 926  MRSITLLQYKQMEGSFEEIARDYQPKWMTAVEILDDDAFLGAENSNNLFVCLKDSAATTD 985

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ--IPT---VIFGTVNGVIGVIAS 686
            +ER ++  V ++HLG+ VN FRHGSLVM+    ++G+   PT   V+FGTV+G IG++  
Sbjct: 986  DERQQMPEVAQFHLGDMVNVFRHGSLVMQ----NIGERTTPTSGCVLFGTVSGAIGLVTQ 1041

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
            +P + Y FL KLQ NL   IK VG ++H  WRSF+ E KT +++ F+DGDL+ESFLDL+R
Sbjct: 1042 IPPDYYEFLRKLQENLTNTIKSVGRIDHTYWRSFHTEMKTENSEGFIDGDLVESFLDLTR 1101

Query: 747  TRMDEISKTMNVSVE---------ELCKRVEELTRLH 774
             +M E +  + + VE         ++ K VE+LTR+H
Sbjct: 1102 EKMHEAALGLQIDVEGTKKEANVDDIIKIVEDLTRIH 1138


>gi|221040048|dbj|BAH11787.1| unnamed protein product [Homo sapiens]
          Length = 1092

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/745 (53%), Positives = 515/745 (69%), Gaps = 46/745 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNH 714
              Y  L  +Q  L KVIK VG + H
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|297267724|ref|XP_001082958.2| PREDICTED: DNA damage-binding protein 1 [Macaca mulatta]
          Length = 1092

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/745 (53%), Positives = 515/745 (69%), Gaps = 46/745 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNH 714
              Y  L  +Q  L KVIK VG + H
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|119594339|gb|EAW73933.1| damage-specific DNA binding protein 1, 127kDa, isoform CRA_a [Homo
            sapiens]
          Length = 1094

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/745 (53%), Positives = 515/745 (69%), Gaps = 46/745 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392  NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451  FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVV 510

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511  AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
             LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570  KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690  SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                           S  EE E+H + ++D  TFE +  +    
Sbjct: 750  TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810  NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870  VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   T
Sbjct: 926  LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATT 985

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            DEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL  
Sbjct: 986  DEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSE 1045

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNH 714
              Y  L  +Q  L KVIK VG + H
Sbjct: 1046 SWYNLLLDMQNRLNKVIKSVGKIEH 1070


>gi|345498295|ref|XP_001607743.2| PREDICTED: DNA damage-binding protein 1-like [Nasonia vitripennis]
          Length = 1140

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/814 (49%), Positives = 546/814 (67%), Gaps = 57/814 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN +PD  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLIKLNTKPDENGSYCSTMETFTNLAPIVDMAVVDLERQGQGQIVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+  + + FD  LV+SF+ +TRIL +N E E+EETEI G
Sbjct: 395  NGIGIQEHASIDLPGIKGMWALKVDSVN-FDNTLVLSFVGQTRILMLNGE-EVEETEIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   + ++Q+T  S RL+S+ S  + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDVIIQITPTSARLISNKSSSVISEWEPDNKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L YLEI D  +    +  L++E++C+DI+P+ +  S ++I AVG+WTDISVRI 
Sbjct: 513  ATGN-DLFYLEINDNQIVSKGYTTLQHEVACVDISPL-DGSSEAKIVAVGLWTDISVRIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F LN + G L D+KKV
Sbjct: 571  TLPKLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLNKQNGMLADKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++ D
Sbjct: 631  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYSD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PL E PRRI +QE ++TF + +++          
Sbjct: 691  SLALATDNTVTIGTIDEIQKLHIRTVPLYESPRRIAYQESTQTFGVITMRVDIQESNGVN 750

Query: 420  ----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                             +E E+H + ++D  TFE +  + L   
Sbjct: 751  IARPSASTQAASISNSNHIPTHNKPSNTASEIGQEVEIHNLLIVDQHTFEVLHAHTLVPT 810

Query: 452  EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
            EY  S++S    +D   YY VGTA + P+E+EP  GRIL++   DGKL  +AEKE KG+ 
Sbjct: 811  EYAMSLISTKLGEDPTPYYIVGTAMINPDESEPKSGRILLYHWNDGKLTQVAEKEIKGSC 870

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
            YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDF++VGDL
Sbjct: 871  YSLVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFVLVGDL 926

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            M+S++LL YK  EG+ EE ARDYN NWM+++EILDDD +LGAEN FNLF  +K+S   ++
Sbjct: 927  MRSVTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATSE 986

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
            EER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+FGTV G IG++  +P  
Sbjct: 987  EERQQMQEVGQFHLGDMVNVFRHGSLVMQHLGESSTPTHGCVLFGTVCGAIGLVTQIPST 1046

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
             Y FL  L+  L  VIK VG + H  WRSFN + K    + F+DGDLIESFLDLS  +M 
Sbjct: 1047 FYEFLRNLEDRLTSVIKSVGKIEHNFWRSFNTDLKIEQCEGFIDGDLIESFLDLSHEKMA 1106

Query: 751  EISKTMNV----------SVEELCKRVEELTRLH 774
            E++  + +          +V++L K VE+LTR+H
Sbjct: 1107 EVAMGIVIDDGSGMKKEATVDDLVKIVEDLTRIH 1140


>gi|383863765|ref|XP_003707350.1| PREDICTED: DNA damage-binding protein 1-like [Megachile rotundata]
          Length = 1138

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/812 (50%), Positives = 549/812 (67%), Gaps = 55/812 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+LR    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 395  NGIGIEEHASIDLPGIKGMWALRIGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI  G +     A L+YE++CLDI+P+  N + ++IAAVG+WTDISVRI 
Sbjct: 513  ATGN-DLFYMEISCGQIVPKGFATLQYEVACLDISPLDGN-TEAKIAAVGLWTDISVRIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 571  TLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +T +VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 631  TLGTQPTVLRTFRSLSTINVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 691  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQENSQTFGVITMRVDIQDSSGVS 750

Query: 420  ----------------------NQSCA----EESEMHFVRLLDDQTFEFISTYPLDTFEY 453
                                  N+  A    +E E+H + ++D  TFE +  + L   EY
Sbjct: 751  IVRHSASTQAASTSSSSHIASHNKPTASDISQEIEVHNLLIIDQHTFEVLHAHMLMPNEY 810

Query: 454  GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYS 513
              S++S    +D   YY VGTA V P+E EP  GRIL++   DGKL  +AEKE KG+ YS
Sbjct: 811  ALSLISTKLGEDPTFYYVVGTALVNPDETEPKMGRILLYHWNDGKLTQVAEKEIKGSCYS 870

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDF++VGDLM+
Sbjct: 871  LVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFVLVGDLMR 926

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE 633
            S++LL YK  EG+ EE ARDYN NWM+AVEILDDD +LGAEN FNLF  +K+S   +++E
Sbjct: 927  SLTLLQYKTMEGSFEEIARDYNPNWMTAVEILDDDTFLGAENCFNLFVCQKDSAATSEDE 986

Query: 634  RGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 692
            R +++ +G++HLG+ VN FRHGSLVM+ L +S       V+FGTV+G IG++  +P   Y
Sbjct: 987  RQQMQEIGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFTFY 1046

Query: 693  LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
             FL  L+  L +VIK VG + H  WRSFN E K  + + F+DGDLIESFLDLS  +M E+
Sbjct: 1047 EFLRHLEYRLTEVIKSVGKIEHRFWRSFNTELKVENCEGFIDGDLIESFLDLSPDKMAEV 1106

Query: 753  SKTM----------NVSVEELCKRVEELTRLH 774
            +  +            +V++L K VE+LTR+H
Sbjct: 1107 AVDLMMDDSSGMRKEATVDDLVKIVEDLTRIH 1138


>gi|298711490|emb|CBJ26578.1| n/a [Ectocarpus siliculosus]
          Length = 1135

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/793 (50%), Positives = 538/793 (67%), Gaps = 45/793 (5%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN + DA+G+Y++VLE Y NLGPI+D CV DL+RQGQGQ VTCSG  KDGSLRI+R
Sbjct: 325  QLIKLNPEKDAQGTYIQVLETYDNLGPILDMCVADLDRQGQGQAVTCSGCSKDGSLRIIR 384

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE-----LEE 124
            NGIGINE A++EL GIKGMWSLR S  +  D +LV +FISETR+LA   EDE     L E
Sbjct: 385  NGIGINEHAAIELAGIKGMWSLRPSNTN-HDKYLVQAFISETRVLAFE-EDEDGDHQLAE 442

Query: 125  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 184
             EI GF  +  TLFC     N  VQVT   V L+     +  + W  P   ++ VA+ NA
Sbjct: 443  GEIAGF-QEGCTLFCGCVGGNMAVQVTKRGVVLICCDGLQEIDRWDPPTDLNITVASGNA 501

Query: 185  SQVLLATGGGHLVYLEIGDGILTEVKHA--QLEYEISCLDINPIGENP------------ 230
            ++V+LA GGG+LV+LE+       V+ A  QL+ EI+C+ +NP    P            
Sbjct: 502  TRVVLALGGGNLVHLEVDATAKKLVQKARVQLDNEIACISLNPPSNQPVSNAEPATTAME 561

Query: 231  -----SYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCA 285
                     + AVGMWTD++VR+ SLPDL  ++ + LGG+   RSV+L     + YL   
Sbjct: 562  CDEESKLDSLVAVGMWTDMTVRLLSLPDLQGVSSQPLGGDTQARSVILATIADVHYLFVG 621

Query: 286  LGDGHLLNFLLNM---KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
            LGDGH+++F L +    T  L   KKV+LGTQP+ L  F +     VF ASDRP VIY S
Sbjct: 622  LGDGHVVSFPLEVTAESTLALGTPKKVALGTQPVGLACFRNNGMVCVFVASDRPAVIYCS 681

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 402
              KLLY+NVN+ EV+ +C F+S+  P  LA+A E  LTIGTIDDIQKLHI+ + LGE P+
Sbjct: 682  GGKLLYANVNMGEVNSVCSFDSSELPHCLALASENSLTIGTIDDIQKLHIQKVSLGEAPQ 741

Query: 403  RICHQEQSRTFAICSLKNQSCA---EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 459
            RI H +  R F I +   ++     EE E +FV+ LDD  FE +  +PLD FE G S++S
Sbjct: 742  RITHHDSGRMFGIITTSYRAVENSDEEEEHNFVKFLDDTNFEELYCHPLDAFENGSSMVS 801

Query: 460  CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE----DGKLQLIAEKETKGAVYSLN 515
            C F++D   Y  VGT YV  +E EP  GR+LVF VE    + K+ L AE ET+GAVY LN
Sbjct: 802  CVFANDKKEYLVVGTGYVREDECEPAVGRLLVFSVEGQGAERKVDLAAEVETRGAVYVLN 861

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             FNGKLLA IN K+QL++W+ +DDG +ELQ+ECG+HGHILAL++Q+RGDFI+VGDLM+S+
Sbjct: 862  GFNGKLLACINSKVQLFRWIEKDDGIQELQTECGYHGHILALHMQSRGDFIIVGDLMRSV 921

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            SLL+YK  +GAIEE ARDY+ANWM+AVE+L+DD+Y+G E + N+FT+R+N++ AT+EER 
Sbjct: 922  SLLVYKAVDGAIEEVARDYHANWMTAVEMLNDDVYIGGEADCNIFTLRRNADAATEEERA 981

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLP--------DSDVGQIPTVIFGTVNGVIGVIASL 687
            RLE+ GE+HLGEFVN+F  GSL+M+          DS + +   ++FGTVNG++G I +L
Sbjct: 982  RLEIQGEFHLGEFVNKFCRGSLLMQSSEVNSPGGMDSPLVKGQPLLFGTVNGMVGTILTL 1041

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
              + + FL +LQT + KV+KGVGG +H++WRSF N ++T  + NF+DGDL+ES+LD+ R 
Sbjct: 1042 TEDNHRFLAQLQTAMTKVVKGVGGFSHDEWRSFTNGRRTSPSSNFIDGDLVESYLDMPRH 1101

Query: 748  RMDEISKTMNVSV 760
              +E+ + ++  V
Sbjct: 1102 NQEEVLRHVDTPV 1114


>gi|452824087|gb|EME31092.1| DNA damage-binding protein 1 isoform 1 [Galdieria sulphuraria]
          Length = 1128

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/798 (48%), Positives = 551/798 (69%), Gaps = 33/798 (4%)

Query: 10   QLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+L  +P  + GS++EV+E Y NL PIVDFCV+D ERQGQGQVVTCSGA KDGSLRI+
Sbjct: 331  QLIRLLSEPHPETGSFLEVMETYPNLSPIVDFCVMDAERQGQGQVVTCSGAAKDGSLRII 390

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI+EQASVE+ G+K ++SL+ S+     + L++SF SE+R+L +   + + E    
Sbjct: 391  RNGIGIHEQASVEVPGVKELFSLKRSSLSSQHSLLLLSFASESRVLELVSTELMAEANFP 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
             F  Q  TL+C + + + +VQ+T    RL+S     + NEW  P G+ ++VA+ N+ Q++
Sbjct: 451  VFEMQEPTLYCGNVVGDCIVQITPSKARLISCEDMSIVNEWHPPSGFRISVASGNSMQLI 510

Query: 189  LATGGGHLVYLEIGDGI--LTEVKHAQLEYEISCLDINPIGE-------NPSYSQIAAVG 239
            +AT GG+L+Y +I      + E  +  LEYEI  LDI+P+G+           S   AVG
Sbjct: 511  IATTGGNLIYFDIDANPKRIMEKSYKSLEYEICSLDISPLGQAGMNLASQAIPSSFVAVG 570

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK 299
            MWT++S+R +SLP L+LI  E LG ++I RS+L    +G  Y L ALGDG LL + L+  
Sbjct: 571  MWTEVSIRFYSLPSLDLIHTEKLGLDVIARSLLFVTMDGEDYFLAALGDGRLLTYRLDKS 630

Query: 300  TGE-------LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK--KLLYSN 350
              +       L D++++S+GTQP +L  F ++N  HVFAA DRPTVI+SS+   KLL SN
Sbjct: 631  AKDTDSEKKFLYDQRQMSIGTQPASLSIFETQNALHVFAACDRPTVIHSSSGGGKLLCSN 690

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            VNL+EV+ +C F+S AFPD LA+  EG L +GT+D+IQKLHIR+IPLGE PRRI H +  
Sbjct: 691  VNLREVTRVCSFSSEAFPDCLALVTEGSLLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTH 750

Query: 411  RTFAICSLK---------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
              FA+ + K         N++ +E +E  +VRL+DD   E + +Y L+ FE  CS+++ +
Sbjct: 751  HVFAVLTTKQVVTISEDGNEALSETTEEGYVRLIDDTMMEIVHSYKLEQFETPCSVITVN 810

Query: 462  FSDDSNV-----YYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
            F DD+       Y+ VGTAY   +E EP++GR+LVF V + +L L+AE+  KGA+YS++A
Sbjct: 811  FGDDAAAKDNQDYFVVGTAYSYADEPEPSRGRMLVFAVREQRLTLVAERTFKGALYSMDA 870

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            FNGK+LA++N  ++L +W   + G R L  EC +HG I  L ++  GDFI++GDL++S+S
Sbjct: 871  FNGKILASVNSMLKLVRWSETESGARTLTEECTYHGSIFILQIKCLGDFILIGDLVRSVS 930

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 636
            LL YK   G IE+ ARD + +W++ +E+LD D Y+ AEN FNLFT+++NS+ +T+EER R
Sbjct: 931  LLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNLFTLKRNSDASTEEERSR 990

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE 696
            LE VGEYHLGE VNR RHG LV+++P+S +  + ++++GT NG +GVIAS+  + + FL 
Sbjct: 991  LEKVGEYHLGELVNRIRHGRLVLQIPESGISILKSLLYGTANGALGVIASIDEKTFQFLH 1050

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQT L +VIKGVGG+ HE WR F +E++  D+KNFLDGDLIE FLDLSR +M+ ++K +
Sbjct: 1051 SLQTALNEVIKGVGGIQHEDWRRFTSERRIGDSKNFLDGDLIERFLDLSRDKMELVAKKV 1110

Query: 757  NVSVEELCKRVEELTRLH 774
            NV VEEL K+VEELTR+H
Sbjct: 1111 NVPVEELAKQVEELTRIH 1128


>gi|350410909|ref|XP_003489174.1| PREDICTED: DNA damage-binding protein 1-like [Bombus impatiens]
          Length = 1141

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/815 (49%), Positives = 543/815 (66%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 395  NGIGIEEHASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI  G +     A L+YE++CLDI+P+ +  + ++IAAVG+WT ISVRI 
Sbjct: 513  ATGN-DLFYMEISCGQIVPKGFATLQYEVACLDISPL-DGHTEAKIAAVGLWTHISVRIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 571  TLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 631  TLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 691  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQDSSGVS 750

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 751  IVRHSASTQAASTSSSSHIASYNKPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMP 810

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   YY VGTA V P+E EP  GRIL++   DGKL  +AEKE KG+
Sbjct: 811  TEYALSLISTKLGEDPTSYYIVGTALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGS 870

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDFI+VGD
Sbjct: 871  CYSLTEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFILVGD 926

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG  EE ARDYN NWM+A+EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 927  LMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFVCQKDSAATS 986

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+FGTV+G IG++  +P 
Sbjct: 987  EDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPF 1046

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  L+  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDLS  +M
Sbjct: 1047 TFYEFLRNLEERLTGVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPNKM 1106

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             +++  + +          +V++L K VE+LTR+H
Sbjct: 1107 ADVASGLMIDDPSGMKKEATVDDLVKIVEDLTRIH 1141


>gi|340714589|ref|XP_003395809.1| PREDICTED: DNA damage-binding protein 1-like [Bombus terrestris]
          Length = 1141

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/815 (49%), Positives = 543/815 (66%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + D  GSY   +E + NL PI+D  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLVKLITKADENGSYCVPMETFTNLAPIIDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 395  NGIGIEEHASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDLFIQITPTSARLISHETKTVVSEWEPENKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI  G +     A L+YE++CLDI+P+ +  + ++IAAVG+WT ISVRI 
Sbjct: 513  ATGN-DLFYMEISYGQIVPKGFATLQYEVACLDISPL-DGHTEAKIAAVGLWTHISVRIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 571  TLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 631  TLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 691  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQDSSGVS 750

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 751  IVRHSASTQAASTSSSSHIASYNKPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMP 810

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   YY VGTA V P+E EP  GRIL++   DGKL  +AEKE KG+
Sbjct: 811  TEYALSLISTKLGEDPTSYYIVGTALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGS 870

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDFI+VGD
Sbjct: 871  CYSLTEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFILVGD 926

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG  EE ARDYN NWM+A+EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 927  LMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFVCQKDSAATS 986

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+FGTV+G IG++  +P 
Sbjct: 987  EDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPF 1046

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  L+  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDLS  +M
Sbjct: 1047 TFYEFLRNLEERLTGVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPNKM 1106

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             +++  + +          +V++L K VE+LTR+H
Sbjct: 1107 ADVASGLMIDDPSGMKKEATVDDLVKIVEDLTRIH 1141


>gi|328788389|ref|XP_396048.3| PREDICTED: DNA damage-binding protein 1-like isoform 1 [Apis
            mellifera]
          Length = 1141

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/815 (49%), Positives = 541/815 (66%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 395  NGIGIEEHASIDLPGIKGMWALKIGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDLFIQITPTSARLISYETKTVVSEWEPENKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L YLEI  G +       L+YE++CLDI+P+  N + ++IAAVG+WT ISV I 
Sbjct: 513  ATGN-DLFYLEISCGQILPKGFTTLQYEVACLDISPLDGN-TEAKIAAVGLWTHISVHIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 571  TLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 631  TLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 691  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQDSSGVS 750

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 751  IVRHSASTQAASTSSSSHIASYNKPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMP 810

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   YY VGTA V P+E EP  GRIL++   DGKL  +AEKE KG+
Sbjct: 811  TEYALSLISTKLGEDPTSYYIVGTALVHPDETEPKMGRILLYHWSDGKLTQVAEKEIKGS 870

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++++GDFI+VGD
Sbjct: 871  CYSLTEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKSKGDFILVGD 926

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG  EE ARDYN NWM+A+EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 927  LMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFVCQKDSAATS 986

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+FGTV+G IG++  +P 
Sbjct: 987  EDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPF 1046

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  L+  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDLS  +M
Sbjct: 1047 IFYEFLRNLEDRLTSVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPDKM 1106

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E++  + +          +V++L K VE+LTR+H
Sbjct: 1107 AEVASGLMIDDPSGMKKEATVDDLVKIVEDLTRIH 1141


>gi|307186138|gb|EFN71863.1| DNA damage-binding protein 1 [Camponotus floridanus]
          Length = 1136

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/813 (48%), Positives = 542/813 (66%), Gaps = 56/813 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 392  NGIGIQEHASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 449

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  S+ + +EW+     +++V   N +QVL 
Sbjct: 450  FVADEQTFHTGNVTNDLFIQITPTSARLISHESKMVVSEWEPQNKRTISVVACNGTQVLC 509

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI    +     A L++E++CLDI+P+ +  + ++I AVG+WTDISVRI 
Sbjct: 510  ATGN-DLFYMEISCNQIVPKGFATLQHEVACLDISPL-DGVNEAKIVAVGLWTDISVRIL 567

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L  + G L+D+K+V
Sbjct: 568  TLPGLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLYKQNGVLSDKKRV 627

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 628  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 687

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 688  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQESSGVS 747

Query: 420  ---------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFE 452
                                            +E E+H + ++D  TFE +  + L   E
Sbjct: 748  IVRHSASTQAASLSSGIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMPTE 807

Query: 453  YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVY 512
            Y  S++S    +DS  YY VGTA++ P+E EP  GRIL+F   DGKL  +AEKE KG+ Y
Sbjct: 808  YALSLISTRLGEDSTSYYVVGTAFINPDETEPKMGRILLFHWSDGKLSQVAEKEIKGSCY 867

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            SL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+ DF++VGDLM
Sbjct: 868  SLVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKSDFVLVGDLM 923

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 632
            +S++LL YK  EG+ EE ARDYN NWM+++EILDDD +LGAEN FNLF  +K+S   +++
Sbjct: 924  RSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFICQKDSAATSED 983

Query: 633  ERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 691
            ER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+FGTV+G IG++  +P   
Sbjct: 984  ERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLFGTVSGAIGLVTQIPFGF 1043

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE 751
            Y FL  L+  L  VIK VG + H  WRSF  + K    + F+DGDLIESFLDLS  +M E
Sbjct: 1044 YEFLRNLEDKLTSVIKSVGKIEHNFWRSFKTDLKIEQCEGFIDGDLIESFLDLSHDKMAE 1103

Query: 752  ISKTM----------NVSVEELCKRVEELTRLH 774
            ++  +            +V++L K VE+LTR+H
Sbjct: 1104 VAMGLMMDDGSGMKKEATVDDLVKIVEDLTRIH 1136


>gi|307205760|gb|EFN83990.1| DNA damage-binding protein 1 [Harpegnathos saltator]
          Length = 1138

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/815 (48%), Positives = 545/815 (66%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 392  NGIGIQEHASIDLPGIKGMWALKVGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 449

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 450  FVADEQTFHTGNVTNDLFIQITPTSARLISHETKIVVSEWEPENKRTISVVACNGTQVLC 509

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI    +     A L++E++CLDI+P+ +  S ++I AVG+WTDISVRI 
Sbjct: 510  ATGN-DLFYMEIICNQIVPKGFATLQHEVACLDISPL-DGISEAKIVAVGLWTDISVRIL 567

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 568  TLPGLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 627

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 628  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 687

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 688  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQESSGVS 747

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 748  IVRHSASTQAASTSSSSHIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMP 807

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   Y+ VGTA + P+E EP  GRIL++   DGKL  +AEKE KG+
Sbjct: 808  TEYALSLISTRLGEDPTSYFVVGTALINPDETEPKMGRILLYHWSDGKLTQVAEKEIKGS 867

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDF++VGD
Sbjct: 868  CYSLVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFVLVGD 923

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG+ EE ARDYN NWM+++EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 924  LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 983

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ VG++HLG+ VN FRHGSLVM+ L +S    +  V+FGTV+G IG++  +P 
Sbjct: 984  EDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTLGCVLFGTVSGAIGLVTQIPF 1043

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  L+  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDL+  +M
Sbjct: 1044 AFYEFLRNLEDRLNSVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLNHDKM 1103

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E++  + +          +V++L K VE+LTR+H
Sbjct: 1104 AEVAMGLMIDDGSGMKKEATVDDLVKVVEDLTRIH 1138


>gi|332030156|gb|EGI69950.1| DNA damage-binding protein 1 [Acromyrmex echinatior]
          Length = 1138

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/815 (48%), Positives = 548/815 (67%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332  QLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 391

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+      FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 392  NGIGIQEHASMDLPGIKGMWALKVGGSH-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 449

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+TS SVRL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 450  FVADEQTFHTGNVTDDLFIQITSTSVRLISHENKIVVSEWEPQNKRTISVVACNGTQVLC 509

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L Y+EI    +       L++E++CLDI+P+ +  + ++I AVG+WTDISVRI 
Sbjct: 510  ATGN-DLFYIEIICNQIVSKGFVTLQHEVACLDISPL-DGVNEAKIVAVGLWTDISVRIL 567

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP+L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F+L+ ++G L+D+KKV
Sbjct: 568  TLPNLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFILHRQSGMLSDKKKV 627

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 628  TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 687

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 688  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQESSGVS 747

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 748  IVRHSASTQAASTSSSSHVVSHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMA 807

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   Y+ VGTA++ P+E EP  GRIL++   +GK   +AEKE KG+
Sbjct: 808  TEYALSLISTKLGEDPTSYFVVGTAFINPDETEPKMGRILLYHWSEGKFTQVAEKEIKGS 867

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDF++VGD
Sbjct: 868  CYSLVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFVLVGD 923

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG+ EE ARDYN NWM+++EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 924  LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 983

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ +G++HLG+ VN FRHGSLVM+ L +S    +  V+FGTV+G IG++  +P 
Sbjct: 984  EDERQQMQEIGQFHLGDMVNVFRHGSLVMQNLGESSTPTLGCVLFGTVSGAIGLVTQIPV 1043

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  ++  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDL+  +M
Sbjct: 1044 TFYEFLRNMEDRLNSVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLNHDKM 1103

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E++  + +          +V++L K VE+LTR+H
Sbjct: 1104 AEVAMGLMIDDGSGMKKEATVDDLVKIVEDLTRIH 1138


>gi|380025901|ref|XP_003696702.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
            [Apis florea]
          Length = 1141

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/815 (49%), Positives = 540/815 (66%), Gaps = 58/815 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 335  QLVKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 394

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E AS++L GIKGMW+L+    + FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 395  NGIGIEEHASIDLPGIKGMWALKIGGGN-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT    +   +  +Q+T  S RL+S  ++ + +EW+     +++V   N +QVL 
Sbjct: 453  FVADEQTFHTGNVTNDLFIQITPTSARLISYETKTVVSEWEPENKRTISVVACNGTQVLC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            ATG   L YLEI  G +       L+YE++CLDI+P+  N + ++IAAVG+WT ISV I 
Sbjct: 513  ATGN-DLFYLEISCGQILPKGFTTLQYEVACLDISPLDGN-TEAKIAAVGLWTHISVHIL 570

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            +LP L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F L+ + G L+D+KKV
Sbjct: 571  TLPALEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFTLHKQNGILSDKKKV 630

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
            +LGTQP  LRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 631  TLGTQPTVLRTFRSLFTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 690

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
            SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 691  SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDIQDSSGVS 750

Query: 420  -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                              +E E+H + ++D  TFE +  + L  
Sbjct: 751  IVRHSASTQAASTSSSSHIASYNKPTGHTASDICQEIEVHNLLIIDQHTFEVLHAHMLMP 810

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             EY  S++S    +D   YY VGTA V P+E EP  GRIL++   DGKL  +AEKE KG+
Sbjct: 811  TEYALSLISTKLGEDPTSYYIVGTALVHPDETEPKMGRILLYHWSDGKLTQVAEKEXKGS 870

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
             YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++++GDFI+VGD
Sbjct: 871  CYSLTEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKSKGDFILVGD 926

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            LM+S++LL YK  EG  EE ARDYN NWM+A+EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 927  LMRSLTLLQYKTMEGCFEEIARDYNPNWMTAIEILDDDTFLGAENCFNLFVCQKDSAATS 986

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            ++ER +++ VG++HLG+ VN FRHGSLVM+ L +S       V+ GTV+G IG++  +P 
Sbjct: 987  EDERQQMQEVGQFHLGDMVNVFRHGSLVMQNLGESSTPTQGCVLXGTVSGAIGLVTQIPF 1046

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              Y FL  L+  L  VIK VG + H  WRSFN E K    + F+DGDLIESFLDLS  +M
Sbjct: 1047 IFYEFLRNLEDRLTSVIKSVGKIEHNFWRSFNTELKIEQCEGFIDGDLIESFLDLSPDKM 1106

Query: 750  DEISKTMNV----------SVEELCKRVEELTRLH 774
             E++  + +          +V++L K VE+LTR+H
Sbjct: 1107 AEVASGLMIDDPSGMKKEATVDDLVKIVEDLTRIH 1141


>gi|193644722|ref|XP_001942922.1| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1156

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/830 (47%), Positives = 547/830 (65%), Gaps = 72/830 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKLN +PD  GS++ VL+ ++NLGPIVD CV+DLERQGQGQVVTCSGAYK+GSLRI+R
Sbjct: 334  QLIKLNKKPDQFGSHITVLDTFMNLGPIVDMCVIDLERQGQGQVVTCSGAYKEGSLRIIR 393

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E A+++L GIKGMW LR +TD   D  LV+SF+  +R+LA + E E+EE ++EG
Sbjct: 394  NGIGIQEVATIDLVGIKGMWPLRITTDSLLDDTLVLSFVGHSRVLAYSGE-EVEEIDLEG 452

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QT +C +   N++VQ+TS SVRL+   S+ L +EW  P G S+NV + N  Q + 
Sbjct: 453  FQSELQTFYCGNTSDNKMVQITSASVRLICLESKCLVSEWNVPDGKSINVVSCNGHQAVC 512

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSY--SQIAAVGMWTDISVR 247
            ATG   L Y+EIG   + +     LE+E+SCLD+    +N  Y  S + AVG+W DISV+
Sbjct: 513  ATGNS-LYYIEIGTDKVDQKGFITLEHEVSCLDVCSF-KNEFYKNSSLVAVGLWMDISVK 570

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            I  LPD   + +E LG EIIPRS+L+  FE I YLLCALGDG L  F LN + G L+D++
Sbjct: 571  ILQLPDFVELVREPLGEEIIPRSILMVTFENIDYLLCALGDGSLCYFHLNPENGVLSDKR 630

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            KV+LGTQP  +R F S  TT VFA SD PTVIYSSN KL++SNVNL++V+HMC  N+ ++
Sbjct: 631  KVNLGTQPTLIRKFQSLATTSVFACSDHPTVIYSSNNKLIFSNVNLRKVNHMCSLNTKSY 690

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-------- 419
            PDSLA+A +  + IGTID++QKLHIR+IPLGE PRRI HQE S++F I +++        
Sbjct: 691  PDSLAMATDTAIIIGTIDEMQKLHIRTIPLGEAPRRIAHQESSKSFGIITMRIDVHEGIN 750

Query: 420  -------------------------NQSCAE------------ESEMHFVRLLDDQTFEF 442
                                     N S               E E+H + +LD  TFE 
Sbjct: 751  LVPARPSASTSAQNISGAINNRMPNNASAVNSNQGPLSSEYGLEVEIHNMLVLDQNTFEV 810

Query: 443  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED--GKLQ 500
            +  + L++ EY  SI+S    DD   YY +GTA V PE+ +P  GRIL+F  +D   KL 
Sbjct: 811  LHAHQLNSNEYALSIISAKLGDDPATYYILGTAVVNPEDQDPKLGRILIFHWDDSSSKLT 870

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
             I EKE KGA Y +  FNGKLLAA+N  ++L++W       +EL+ EC H  +I+AL+V+
Sbjct: 871  PITEKEVKGACYGMAEFNGKLLAAVNCTVRLFEWT----AEKELRLECSHFNNIVALFVK 926

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
            T+GDFIV GDLM+S++LL YK  EG+ EE ARDYN  W +A+EI+DDD++LGAEN+ NLF
Sbjct: 927  TKGDFIVCGDLMRSLTLLQYKTMEGSFEEIARDYNPKWSTAIEIIDDDVFLGAENDKNLF 986

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNG 679
             + K+S   +DE R +L+ +G++H G+ +N FRHGSLVM+   D+ V     +++GT +G
Sbjct: 987  IIHKDSTLTSDEARHQLQEIGQFHCGDLINVFRHGSLVMQHFTDTYVSVQGGILYGTCSG 1046

Query: 680  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
             +G++  L  + + FL  L+ +L  V+KGVG +NH+ WRS++ E +T  +++F+DGDLIE
Sbjct: 1047 ALGLVTQLTPKMFDFLSDLEKSLATVVKGVGKINHQFWRSYHTEIRTEPSESFVDGDLIE 1106

Query: 740  SFLDLSRTRM---------------DEISKTMNVSVEELCKRVEELTRLH 774
            SFLDLS+  M                +I K   +S++++ K VE+LTR+H
Sbjct: 1107 SFLDLSKREMIAVVDALQGAYDHEFKKIPKDTKISLDDVIKLVEDLTRIH 1156


>gi|452824086|gb|EME31091.1| DNA damage-binding protein 1 isoform 2 [Galdieria sulphuraria]
          Length = 1150

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/820 (47%), Positives = 551/820 (67%), Gaps = 55/820 (6%)

Query: 10   QLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+L  +P  + GS++EV+E Y NL PIVDFCV+D ERQGQGQVVTCSGA KDGSLRI+
Sbjct: 331  QLIRLLSEPHPETGSFLEVMETYPNLSPIVDFCVMDAERQGQGQVVTCSGAAKDGSLRII 390

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI+EQASVE+ G+K ++SL+ S+     + L++SF SE+R+L +   + + E    
Sbjct: 391  RNGIGIHEQASVEVPGVKELFSLKRSSLSSQHSLLLLSFASESRVLELVSTELMAEANFP 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
             F  Q  TL+C + + + +VQ+T    RL+S     + NEW  P G+ ++VA+ N+ Q++
Sbjct: 451  VFEMQEPTLYCGNVVGDCIVQITPSKARLISCEDMSIVNEWHPPSGFRISVASGNSMQLI 510

Query: 189  LATGGGHLVYLEIGDGI--LTEVKHAQLEYEISCLDINPIGE-------NPSYSQIAAVG 239
            +AT GG+L+Y +I      + E  +  LEYEI  LDI+P+G+           S   AVG
Sbjct: 511  IATTGGNLIYFDIDANPKRIMEKSYKSLEYEICSLDISPLGQAGMNLASQAIPSSFVAVG 570

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK 299
            MWT++S+R +SLP L+LI  E LG ++I RS+L    +G  Y L ALGDG LL + L+  
Sbjct: 571  MWTEVSIRFYSLPSLDLIHTEKLGLDVIARSLLFVTMDGEDYFLAALGDGRLLTYRLDKS 630

Query: 300  TGE-------LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK--KLLYSN 350
              +       L D++++S+GTQP +L  F ++N  HVFAA DRPTVI+SS+   KLL SN
Sbjct: 631  AKDTDSEKKFLYDQRQMSIGTQPASLSIFETQNALHVFAACDRPTVIHSSSGGGKLLCSN 690

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            VNL+EV+ +C F+S AFPD LA+  EG L +GT+D+IQKLHIR+IPLGE PRRI H +  
Sbjct: 691  VNLREVTRVCSFSSEAFPDCLALVTEGSLLLGTVDNIQKLHIRTIPLGEQPRRIAHLDTH 750

Query: 411  RTFAICSLK---------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
              FA+ + K         N++ +E +E  +VRL+DD   E + +Y L+ FE  CS+++ +
Sbjct: 751  HVFAVLTTKQVVTISEDGNEALSETTEEGYVRLIDDTMMEIVHSYKLEQFETPCSVITVN 810

Query: 462  FSDDSNV-----YYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
            F DD+       Y+ VGTAY   +E EP++GR+LVF V + +L L+AE+  KGA+YS++A
Sbjct: 811  FGDDAAAKDNQDYFVVGTAYSYADEPEPSRGRMLVFAVREQRLTLVAERTFKGALYSMDA 870

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            FNGK+LA++N  ++L +W   + G R L  EC +HG I  L ++  GDFI++GDL++S+S
Sbjct: 871  FNGKILASVNSMLKLVRWSETESGARTLTEECTYHGSIFILQIKCLGDFILIGDLVRSVS 930

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR 636
            LL YK   G IE+ ARD + +W++ +E+LD D Y+ AEN FNLFT+++NS+ +T+EER R
Sbjct: 931  LLAYKPMNGTIEDVARDIDPSWITVIEMLDLDYYISAENCFNLFTLKRNSDASTEEERSR 990

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF---------------------- 674
            LE VGEYHLGE VNR RHG LV+++P+S +  + ++++                      
Sbjct: 991  LEKVGEYHLGELVNRIRHGRLVLQIPESGISILKSLLYGMYICFDDNLKELFMHKYRFNL 1050

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            GT NG +GVIAS+  + + FL  LQT L +VIKGVGG+ HE WR F +E++  D+KNFLD
Sbjct: 1051 GTANGALGVIASIDEKTFQFLHSLQTALNEVIKGVGGIQHEDWRRFTSERRIGDSKNFLD 1110

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            GDLIE FLDLSR +M+ ++K +NV VEEL K+VEELTR+H
Sbjct: 1111 GDLIERFLDLSRDKMELVAKKVNVPVEELAKQVEELTRIH 1150


>gi|198432471|ref|XP_002129229.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 2 [Ciona intestinalis]
          Length = 1142

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/819 (48%), Positives = 538/819 (65%), Gaps = 62/819 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L+  P  +   + VL+ Y NLGPI+D CVVDL+RQGQGQVVTCSGA+K+GSLRI+R
Sbjct: 332  QLIRLHTTP-VEVHLISVLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAFKEGSLRIIR 390

Query: 70   NGIGINEQASVELQGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            NGIGI E AS++L GIKG+W LR   T   +DT LV+SF+  +RIL ++ E E+EET++ 
Sbjct: 391  NGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDT-LVISFVGHSRILQLSGE-EVEETDLP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF  ++QT +C +  +NQLVQ+T  S+RL+S T R   +EWK      ++VAT N SQVL
Sbjct: 449  GFDDESQTFYCSNVCHNQLVQITEKSIRLISHTERRQVHEWKPKNDRHISVATCNKSQVL 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS--------YSQIAAVGM 240
            LA G   L Y EI  G + E     L +E++CL I P+  +PS         + I AVG+
Sbjct: 509  LAIGSS-LHYFEIQPGEVIERACVDLPHEVACLTIEPLVSDPSELEGPDFVTASICAVGL 567

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT 300
            W D + R+  LP L  + ++ L  EIIPRS+LL  F+GI+YLL  LGDG L  F LN +T
Sbjct: 568  WNDNTARVLKLPTLEEMHQQKLADEIIPRSILLVQFDGINYLLVTLGDGTLFYFTLNPET 627

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            G ++DRKKV LGTQP +L  F+S  +  VFA SDRPTV+YSSNKKL++SNVNLKEVSHMC
Sbjct: 628  GYISDRKKVPLGTQPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMC 687

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
            P +S  +PDSLA+A +  L IGTID+IQKLHIR++PL E PRRI +QE+S+ F + +L+ 
Sbjct: 688  PLDSDGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLYESPRRIAYQEESQCFGLVTLRT 747

Query: 421  QSC-AEESEMHFVR----------------------------------LLDDQTFEFIST 445
             S  A   +M   R                                  ++D  TFE    
Sbjct: 748  DSVDATGDKMKITRPSASTQASVCTKSPPVDGRSVEGFSATADIGSLLIIDQHTFEVHHA 807

Query: 446  YPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEK 505
            Y LDT E   SI+SC    D N Y+ VGTA+V  EE EP  GRILVF   D KL L+AEK
Sbjct: 808  YQLDTNEEPLSIMSCKLGSDPNSYFVVGTAFVYMEETEPKHGRILVFHYIDNKLTLVAEK 867

Query: 506  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 565
            E KGAV+ L  FNG +LAAIN  + +Y+W       +EL++EC +  +ILALY++ +GDF
Sbjct: 868  EVKGAVFCLCQFNGHVLAAINTSVSIYQWTTE----KELRAECSNQSNILALYLKCKGDF 923

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            ++VGDLM+S+S+L YKH EG ++E A+DY+ NWM+AVEILDDD +LGAEN +N+F  +K+
Sbjct: 924  VLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYNVFICQKD 983

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVI 684
            S   TDEER +L     +H+G+ +N FRHGSLVM+ + ++ V     ++FGTV+G IGVI
Sbjct: 984  SGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAVSSKGHILFGTVHGSIGVI 1043

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
             ++  + Y FL  +Q  L KVIK VG ++HE WRSF   +KT   + F+DGDLIE FLDL
Sbjct: 1044 TTVDEDLYAFLHSIQNRLAKVIKSVGNIDHESWRSFCTNEKTEAHRGFVDGDLIECFLDL 1103

Query: 745  SRTRMDEISKTMNV---------SVEELCKRVEELTRLH 774
            +R +M E++K + V         +V++L K VEE+ R+H
Sbjct: 1104 NREKMAEVAKGLMVKEHGTKREATVDDLIKAVEEMNRIH 1142


>gi|198432469|ref|XP_002129207.1| PREDICTED: similar to DNA damage-binding protein 1 (Damage-specific
            DNA-binding protein 1) (UV-damaged DNA-binding factor)
            (DDB p127 subunit) (DNA damage-binding protein a) (DDBa)
            (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma
            pigmentosum group E-co... isoform 1 [Ciona intestinalis]
          Length = 1150

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/827 (48%), Positives = 540/827 (65%), Gaps = 69/827 (8%)

Query: 10   QLIKL----NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 65
            QLI+L    +++   K S + VL+ Y NLGPI+D CVVDL+RQGQGQVVTCSGA+K+GSL
Sbjct: 331  QLIRLPTDSSMEGRPKPSLISVLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAFKEGSL 390

Query: 66   RIVRNGIGINEQASVELQGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNLEDELEE 124
            RI+RNGIGI E AS++L GIKG+W LR   T   +DT LV+SF+  +RIL ++ E E+EE
Sbjct: 391  RIIRNGIGIQEHASIDLPGIKGLWPLRVFDTSRSYDT-LVISFVGHSRILQLSGE-EVEE 448

Query: 125  TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA 184
            T++ GF  ++QT +C +  +NQLVQ+T  S+RL+S T R   +EWK      ++VAT N 
Sbjct: 449  TDLPGFDDESQTFYCSNVCHNQLVQITEKSIRLISHTERRQVHEWKPKNDRHISVATCNK 508

Query: 185  SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS--------YSQIA 236
            SQVLLA G   L Y EI  G + E     L +E++CL I P+  +PS         + I 
Sbjct: 509  SQVLLAIGSS-LHYFEIQPGEVIERACVDLPHEVACLTIEPLVSDPSELEGPDFVTASIC 567

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLL 296
            AVG+W D + R+  LP L  + ++ L  EIIPRS+LL  F+GI+YLL  LGDG L  F L
Sbjct: 568  AVGLWNDNTARVLKLPTLEEMHQQKLADEIIPRSILLVQFDGINYLLVTLGDGTLFYFTL 627

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 356
            N +TG ++DRKKV LGTQP +L  F+S  +  VFA SDRPTV+YSSNKKL++SNVNLKEV
Sbjct: 628  NPETGYISDRKKVPLGTQPTSLSVFTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEV 687

Query: 357  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC 416
            SHMCP +S  +PDSLA+A +  L IGTID+IQKLHIR++PL E PRRI +QE+S+ F + 
Sbjct: 688  SHMCPLDSDGYPDSLALANDNTLLIGTIDEIQKLHIRTVPLYESPRRIAYQEESQCFGLV 747

Query: 417  SLKNQSC-AEESEMHFVR----------------------------------LLDDQTFE 441
            +L+  S  A   +M   R                                  ++D  TFE
Sbjct: 748  TLRTDSVDATGDKMKITRPSASTQASVCTKSPPVDGRSVEGFSATADIGSLLIIDQHTFE 807

Query: 442  FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQL 501
                Y LDT E   SI+SC    D N Y+ VGTA+V  EE EP  GRILVF   D KL L
Sbjct: 808  VHHAYQLDTNEEPLSIMSCKLGSDPNSYFVVGTAFVYMEETEPKHGRILVFHYIDNKLTL 867

Query: 502  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 561
            +AEKE KGAV+ L  FNG +LAAIN  + +Y+W       +EL++EC +  +ILALY++ 
Sbjct: 868  VAEKEVKGAVFCLCQFNGHVLAAINTSVSIYQWTTE----KELRAECSNQSNILALYLKC 923

Query: 562  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            +GDF++VGDLM+S+S+L YKH EG ++E A+DY+ NWM+AVEILDDD +LGAEN +N+F 
Sbjct: 924  KGDFVLVGDLMRSMSILNYKHVEGNLDEIAKDYSPNWMTAVEILDDDNFLGAENFYNVFI 983

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGV 680
             +K+S   TDEER +L     +H+G+ +N FRHGSLVM+ + ++ V     ++FGTV+G 
Sbjct: 984  CQKDSGATTDEERSKLREAALFHVGDSINTFRHGSLVMQNVGETAVSSKGHILFGTVHGS 1043

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            IGVI ++  + Y FL  +Q  L KVIK VG ++HE WRSF   +KT   + F+DGDLIE 
Sbjct: 1044 IGVITTVDEDLYAFLHSIQNRLAKVIKSVGNIDHESWRSFCTNEKTEAHRGFVDGDLIEC 1103

Query: 741  FLDLSRTRMDEISKTMNV-------------SVEELCKRVEELTRLH 774
            FLDL+R +M E++K + V             +V++L K VEE+ R+H
Sbjct: 1104 FLDLNREKMAEVAKGLMVKNFNDQHGTKREATVDDLIKAVEEMNRIH 1150


>gi|302837243|ref|XP_002950181.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
 gi|300264654|gb|EFJ48849.1| UV-damaged DNA binding complex subunit 1 protein [Volvox carteri f.
            nagariensis]
          Length = 1104

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/779 (49%), Positives = 541/779 (69%), Gaps = 52/779 (6%)

Query: 9    KQLIKLNLQP-DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
             QL++++ QP +   +Y+E+++ + +L PIVDF V+DLERQGQGQ+V CSG   DGSLR+
Sbjct: 335  SQLVRISAQPVNQPPTYLELVDSFPSLAPIVDFVVMDLERQGQGQLVMCSGIDSDGSLRV 394

Query: 68   VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
            VRNGIGIN QA+VEL GIKG+WSLRS  DD +D +L+++F+ ETR+LA+N E+EL+E E+
Sbjct: 395  VRNGIGINRQATVELPGIKGVWSLRSHYDDEYDKYLLLTFVGETRLLALNTEEELDEAEL 454

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             GF S +QTL+C +   + L+Q +  SVRLV + S +L +EW+  PG++++VA  + +QV
Sbjct: 455  PGFDSGSQTLWCGNMATDHLLQASGSSVRLVDTASLQLVSEWRPAPGFAIHVAAGSPTQV 514

Query: 188  LLATGGGHLVYLEI---GDGI--LTEVKHAQLEYEISCLDINPI--------GENP-SYS 233
            ++ATGGGHLVYLE+    +G+  + E+ +  L+ E++C+D++P+        GE P   S
Sbjct: 515  VVATGGGHLVYLEVVRRPEGVVEVVEISNVVLDSEVACVDVSPLMLQQQPLAGEWPGGRS 574

Query: 234  QIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLN 293
             + AVG W D ++++ S+P L  ++   LGGE+IPRSVL  A EG+ Y +  LGDG L  
Sbjct: 575  SVVAVGRW-DQTMQLLSVPSLAPLSSTPLGGEVIPRSVLCTALEGVPYCMVGLGDGALHT 633

Query: 294  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT------------------THVFAASDR 335
            + L+  TG L+D+K++ LGT+PI LRTF +                       VFAASDR
Sbjct: 634  WRLDPATGGLSDKKRLVLGTKPIMLRTFRTAAAVSGGGGGSLRGSGGGHGGVSVFAASDR 693

Query: 336  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI 395
            PTV+YSSNKKLLYSN+N  +V+ +  F+SAAFP SLA+A EG LTIGT D+IQKLH+R++
Sbjct: 694  PTVVYSSNKKLLYSNLNENDVAFLASFHSAAFPRSLAVASEGALTIGTADEIQKLHVRAV 753

Query: 396  PLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 455
            PLGE+PRRI H E +R   + +++  S  + SE  F+RLLDD TF+ +++Y L   E  C
Sbjct: 754  PLGENPRRIAHHEGARMLGVLTMRLDS--DGSERSFLRLLDDTTFDVVASYALAPGEMPC 811

Query: 456  SILSCSFSDDS-------NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETK 508
            S+ +   S +        N  + VGTA+++PEE EPTKGRILV       ++L+ EKE K
Sbjct: 812  SLAAWPGSSNGTAAVGALNACFLVGTAFIVPEEPEPTKGRILVL----EHVRLVTEKEVK 867

Query: 509  GAVYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTR-ELQSECGHHGHILALYVQTRGDFI 566
            GA Y++  F   K+LA++N K+      L   G R EL SEC + G+ILALY+ TRG+ +
Sbjct: 868  GAAYNVLPFVKDKILASVNSKVPASGCDL--GGVRVELASECSYLGNILALYLATRGNLV 925

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            VVGDLM+S+SLL Y  E+G +E RA DYN+ W ++VE LDDD YL  +N+ NL  +R+N+
Sbjct: 926  VVGDLMRSVSLLSYNVEQGVLEHRAADYNSGWTTSVEALDDDTYLEGDNHLNLVVLRRNA 985

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-VIFGTVNGVIGVIA 685
            + ATDEER RL+VVGEYH G FVNRFRHGSLVMR PDS+   +P  ++FG  +G +GVIA
Sbjct: 986  DSATDEERARLQVVGEYHTGTFVNRFRHGSLVMRPPDSEFVSLPVPLLFGGTDGRLGVIA 1045

Query: 686  SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
             LP   Y  L KLQ+ LR+V++GVGGL+HE W +F+NE++T DAK F+DGDLIE+FLDL
Sbjct: 1046 RLPPGLYEMLTKLQSALRQVVRGVGGLSHEAWIAFSNERRTADAKGFVDGDLIETFLDL 1104


>gi|308808936|ref|XP_003081778.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
 gi|116060244|emb|CAL56303.1| putative UV-damaged DNA binding factor (ISS) [Ostreococcus tauri]
          Length = 1282

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/726 (54%), Positives = 498/726 (68%), Gaps = 71/726 (9%)

Query: 10   QLIKL-----NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            QLIKL     N+  D   SY+++LE + NLGPIVDF  VDLER GQGQVVTCSGAYKDGS
Sbjct: 555  QLIKLHSEKTNVDKDGNLSYIQILEEFTNLGPIVDFAFVDLERHGQGQVVTCSGAYKDGS 614

Query: 65   LRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM--NLEDEL 122
            LR+VRNGIGI+EQA ++L G+KG++SLR   +   D +LVV+FI+ETRIL    +  D L
Sbjct: 615  LRVVRNGIGIDEQAVIQLPGVKGLFSLRDDDESQVDKYLVVTFINETRILGFVGDEGDTL 674

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            +ETEI GF ++ QTL C + + +                                     
Sbjct: 675  DETEISGFNAEAQTLCCGNMLES------------------------------------- 697

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
                      GG L  L    G L  V  A  E EI+CLD  P+GE  S S + AVG+W+
Sbjct: 698  ----------GGKLHCLSAMKGKLALVASATFEDEIACLDCTPMGEATS-SPVCAVGLWS 746

Query: 243  DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE 302
             + + + S+ DL++I +E  G +IIPRS LLC+FE I YLL  LGDG L+ +LL+ K+GE
Sbjct: 747  -MEIVLASMSDLSVIKRESTGEDIIPRSTLLCSFESIPYLLVGLGDGQLITYLLDEKSGE 805

Query: 303  LTDRKKVSLGTQPITLRTFSS--KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            L+ RKK+SLGT+PITL+TF S   N   VFAASDRPTVI+S+NKKL+YSNVN++EV H+C
Sbjct: 806  LSVRKKLSLGTKPITLQTFKSHATNVHSVFAASDRPTVIFSNNKKLIYSNVNVQEVLHVC 865

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC---- 416
            PF+SAAFPD+LA+A E +LTIG IDDIQKLHIR+IPLG  PRRI HQ ++ TFA+     
Sbjct: 866  PFSSAAFPDALALAGEEDLTIGGIDDIQKLHIRTIPLGGQPRRIAHQPETNTFAVVVEHL 925

Query: 417  -SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 475
             S  +Q C       FVRL+DD +FE +S + L+  E   S+ SC+F+ DS  YY VGT 
Sbjct: 926  WSKSSQDC-------FVRLVDDGSFETLSQFQLEDQELTSSLTSCTFAGDSTTYYVVGTG 978

Query: 476  YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
              L  E+EP++GRILVF V+D +L L++EKE +GAVY+LNAF GKLLA IN K++L+KW 
Sbjct: 979  IALETEDEPSRGRILVFKVDDDQLVLVSEKEVRGAVYNLNAFKGKLLAGINSKLELFKWT 1038

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
             R+D   EL SEC HHG I+   V+TRGD+I+VGDLMKS+SLL+YK EEGAI+E ARD+N
Sbjct: 1039 PREDEVHELVSECSHHGQIVTFAVKTRGDWILVGDLMKSMSLLLYKPEEGAIDEVARDFN 1098

Query: 596  ANWMSAVEILDDD-IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH 654
            ANWM+AV +LDDD  YLGAEN+ NLFTV +N    TDEER RLE+ GEYHLGE VN F  
Sbjct: 1099 ANWMTAVAMLDDDETYLGAENSLNLFTVSRNVNAVTDEERSRLEITGEYHLGELVNAFAP 1158

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            GSLVM L D +   +PT++FGT NGVIGV+ASLP + Y F E+LQ ++ K I+GVGGL H
Sbjct: 1159 GSLVMSLRDGESLSVPTLLFGTANGVIGVLASLPKDVYEFTERLQASINKHIQGVGGLKH 1218

Query: 715  EQWRSF 720
              WRSF
Sbjct: 1219 ADWRSF 1224


>gi|412992547|emb|CCO18527.1| predicted protein [Bathycoccus prasinos]
          Length = 1275

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/791 (47%), Positives = 531/791 (67%), Gaps = 44/791 (5%)

Query: 23   SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 82
            SYVEVLE + NLGPIVDFCV+DLER GQGQ+VTCSG    GSLR++RNGIGI EQA + L
Sbjct: 487  SYVEVLEEFTNLGPIVDFCVMDLERHGQGQLVTCSGVGTSGSLRVIRNGIGIREQAQISL 546

Query: 83   QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
             GIKG++S +     P D++L+VSFI+ETRILA+N  DELEE    GF + +QT+ C + 
Sbjct: 547  SGIKGLYSCKRDETMPLDSYLIVSFIAETRILAINDNDELEEAVFPGFDASSQTIECANI 606

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
              N + QVTS  V +  ++S EL   W       +  ++A+ + + +AT GG+L YL   
Sbjct: 607  SGNVICQVTSKGVYVCDASSGELVASWVPSDESPITASSASENTIAVATVGGNLHYLSFQ 666

Query: 203  DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
             G ++E      + EISC+D    G+      + AVG+W+   + +     + +   E+L
Sbjct: 667  GGKISETGKMTFDAEISCIDKTQCGDR----NVCAVGLWSTKVLLVELGSGMKVCHTENL 722

Query: 263  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE----LTDRKKVSLGTQPITL 318
              +++PRS L C FE   YLL  LGDGHL+  +++  +      L+DRK VSLGTQP+TL
Sbjct: 723  SLDVVPRSTLFCFFEDTIYLLTGLGDGHLITNVVDSSSSAGGFALSDRKSVSLGTQPVTL 782

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
            + F S+++ HVFA SDRPT+IYS++KKL+YSNVNL EV H+ PFN  AFPD+LA+A    
Sbjct: 783  KLFKSQHSMHVFAGSDRPTIIYSNSKKLVYSNVNLNEVLHVAPFNCDAFPDALALASGEH 842

Query: 379  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQ 438
            LTIG +DDIQKLHIR++PL E PRRI HQ +++T A+ ++K      + E  FVRL D++
Sbjct: 843  LTIGAVDDIQKLHIRTVPLREQPRRIAHQPETKTLAVLTMKESDVPGQEEEFFVRLFDNK 902

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP-EENEPTKGRILVFIVE-- 495
            TFE ++ YPL+  E   SI+SCSF  D ++Y+ VGTA+  P  E E ++GRILVF V   
Sbjct: 903  TFETLAKYPLEPNENDASIISCSFDGDDDIYFVVGTAFADPHSEPESSRGRILVFKVSNT 962

Query: 496  ----------------DGK-----------LQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
                            DG+           L L+ EKET+GAVY+LNAF GKLLA IN  
Sbjct: 963  SSSGGGNAVVNGNDHGDGRASASSSVLQKSLTLVCEKETRGAVYNLNAFCGKLLAGINSL 1022

Query: 529  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
            ++L+ W +  +  REL  EC H GHI+AL V+T+ + IVVGDLMKSI+LL Y+ E G IE
Sbjct: 1023 VKLFNWGVSKENKRELVHECSHMGHIIALKVETKDNLIVVGDLMKSITLLQYQRESGRIE 1082

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
            E A D+++NWM+AVEILDD+ YLGAE+++NLFTV++N++  T+++RG LE+ G +HLG+ 
Sbjct: 1083 EVAHDFSSNWMTAVEILDDNTYLGAESSYNLFTVQRNADADTEDKRGTLELCGAFHLGDS 1142

Query: 649  VNRFRHGSLVMRLPD-----SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
            VNRFR GSLVMR+PD     S + +I T +FGT++G +GV+A+LP   ++ L K+Q  ++
Sbjct: 1143 VNRFRRGSLVMRMPDLSDDTSSLSEISTWLFGTISGGLGVVATLPKRDFMLLNKVQEAMQ 1202

Query: 704  KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS-VEE 762
            KV+ GVG  +H  +RSF+N +++V+ +NF+DGDL+E FLDLS+     +S+   VS  E+
Sbjct: 1203 KVVTGVGNFSHSDFRSFHNVQRSVEMRNFIDGDLVEIFLDLSKEDQVAVSELSGVSNSED 1262

Query: 763  LCKRVEELTRL 773
            L K++EE++RL
Sbjct: 1263 LVKKIEEISRL 1273


>gi|159489018|ref|XP_001702494.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
            reinhardtii]
 gi|158280516|gb|EDP06273.1| UV-damaged DNA binding complex subunit 1 protein [Chlamydomonas
            reinhardtii]
          Length = 1147

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/784 (48%), Positives = 529/784 (67%), Gaps = 53/784 (6%)

Query: 10   QLIKLNLQP-DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QL++++  P +   SYVE+++ + NLGPI+DF V+DLERQGQGQ+VTCSG   DGSLR++
Sbjct: 368  QLVRISPTPVNQPPSYVELVDSFPNLGPILDFVVMDLERQGQGQLVTCSGVDGDGSLRVI 427

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGIN QA+VEL GIKG+WSLR+   D  D +LV++F+ ETR+LA+N E+EL+E EI 
Sbjct: 428  RNGIGINRQATVELAGIKGVWSLRAHYGDEHDAYLVLTFVGETRLLALNAEEELDEAEIP 487

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF +  QTL+C +   + L+QVTS SVRLV S+S  L +EW+ P G+S+NVA  + +QV+
Sbjct: 488  GFDAAAQTLWCGNTACDHLLQVTSSSVRLVDSSSLALVSEWRPPAGFSINVAAGSPTQVV 547

Query: 189  LATGGGHLVYLEI----GDGILTEVKHAQLEYEISCLDINPI------GENPSYSQIAAV 238
            +ATGGGHLVYLE+    G   + EV +  L+ E++C+D++P+      G +   S + AV
Sbjct: 548  VATGGGHLVYLEVQAQAGGAAVVEVANVTLDSEVACVDVSPLLLTAGPGGSAERSGLVAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 298
            G W D ++++ ++P L  ++   LGGE+IPRSVL    EG+ Y +  LGDG L  + L  
Sbjct: 608  GRW-DQTLQLLAVPGLTPLSVTPLGGEVIPRSVLCVGLEGVPYCMVGLGDGALHTWRLEP 666

Query: 299  KTGELTDRKKVSLGTQPITLRTFSS-------------------KNTTHVFAASDRPTVI 339
             TG LTDRK+V LGT+PITLRTF +                        VFAASDRPTV+
Sbjct: 667  ATGALTDRKRVVLGTKPITLRTFRTAAAAAAAAGGDNGGARGGGGGGVSVFAASDRPTVV 726

Query: 340  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGE 399
            YSSN+KL+YSN+N  +V+H+  F++AAFP SLA+A E  LTIGT D +QKLH+R++ LGE
Sbjct: 727  YSSNRKLMYSNLNENDVAHLSSFHAAAFPHSLAVASEAALTIGTADQLQKLHVRTVVLGE 786

Query: 400  HPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 459
             PRRI H E  R   + + ++    E  ++   RLLDD TF+ +++Y L   E  C   +
Sbjct: 787  QPRRIAHHEAGRLLGVLTQRDPDGEERGQL---RLLDDTTFDVVASYGLAPGEMPCGGSA 843

Query: 460  CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF----------IVEDGKLQLIAEKETKG 509
             + S      + VGT  + P+E EP++GRILV               G ++L+ EKE KG
Sbjct: 844  SAASAAGPATFIVGTVLLRPDEPEPSRGRILVLEYLPGGAGGAAAGGGAVRLVTEKEVKG 903

Query: 510  AVYSLNAFNG-KLLAAINQKIQLYKWMLRDDGTR-------ELQSECGHHGHILALYVQT 561
            A Y++  F G K+LA++N K+ +Y+W++R+           EL SEC H G++LALY+  
Sbjct: 904  AAYNVRPFAGDKILASVNNKVTVYRWVVREGSGGPGGCGAYELASECHHLGNVLALYLAA 963

Query: 562  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            RG  +VVGDLM+S+SLL Y  E+G +E RA DYN+ W +AVEILDDD Y+ A+N+ NL+ 
Sbjct: 964  RGGLVVVGDLMRSVSLLSYNAEQGVLEHRAADYNSGWTTAVEILDDDNYIAADNHCNLYV 1023

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD-VGQIPTVIFGTVNGV 680
            VR+N++ ATDEER RL+VVGE+H G F+N+ R+GSLVMRLPDS+  G  P ++F   +G 
Sbjct: 1024 VRRNADSATDEERARLQVVGEFHTGTFINQMRNGSLVMRLPDSEHAGLPPPLLFAGTDGR 1083

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            +GV+A LP   Y +  KLQT +R V++GVGGL+HEQWR+F N+++  +A+ F+DGDLIES
Sbjct: 1084 LGVVARLPPALYEWATKLQTAMRSVVRGVGGLDHEQWRAFANDRRCGEARGFVDGDLIES 1143

Query: 741  FLDL 744
             LDL
Sbjct: 1144 LLDL 1147


>gi|194381178|dbj|BAG64157.1| unnamed protein product [Homo sapiens]
          Length = 826

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/747 (51%), Positives = 499/747 (66%), Gaps = 56/747 (7%)

Query: 78  ASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTL 137
           AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ GF    QT 
Sbjct: 86  ASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMGFVDDQQTF 144

Query: 138 FCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLV 197
           FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++A G   L 
Sbjct: 145 FCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRA-LY 203

Query: 198 YLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 257
           YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI  LP   L+
Sbjct: 204 YLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 263

Query: 258 TKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
            KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  
Sbjct: 264 HKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTV 323

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A   
Sbjct: 324 LRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNS 383

Query: 378 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------ 419
            LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +                  
Sbjct: 384 TLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSAS 443

Query: 420 ---------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSIL 458
                                  S  EE E+H + ++D  TFE +  +     EY  S++
Sbjct: 444 TQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLV 503

Query: 459 SCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
           SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FN
Sbjct: 504 SCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN 563

Query: 519 GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
           GKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL
Sbjct: 564 GKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 619

Query: 579 IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 638
            YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+
Sbjct: 620 AYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQ 679

Query: 639 VVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 697
            VG +HLGEFVN F HGSLVM+ L ++      +V+FGTVNG+IG++ SL    Y  L  
Sbjct: 680 EVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLD 739

Query: 698 LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
           +Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   + 
Sbjct: 740 MQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQ 799

Query: 758 ----------VSVEELCKRVEELTRLH 774
                      + ++L K VEELTR+H
Sbjct: 800 YDDGSGMKREATADDLIKVVEELTRIH 826


>gi|226510488|ref|NP_001145925.1| uncharacterized protein LOC100279448 [Zea mays]
 gi|219884971|gb|ACL52860.1| unknown [Zea mays]
          Length = 416

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/416 (82%), Positives = 379/416 (91%)

Query: 359 MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
           MCPFN+AAFPDSLAIAKEGEL+IGTIDDIQKLHIR+IPL E  RRICHQEQSRT A CS 
Sbjct: 1   MCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSF 60

Query: 419 KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 478
           K     EESE H +RLLD QTFE +  YPLD +E GCSI+SCSF+DDSNVYYCVGTAYV+
Sbjct: 61  KYNQSVEESETHLIRLLDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVI 120

Query: 479 PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
           PEENEPTKGRILVF VEDG LQLI EKETKGAVYSLNAFNGKLLAAINQKIQLYKWM R+
Sbjct: 121 PEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSRE 180

Query: 539 DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
           DG+ ELQSECGHHGHILALY QTRGDFIVVGDLMKSISLL+YKHEE AIEERARDYNANW
Sbjct: 181 DGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEERARDYNANW 240

Query: 599 MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
           M+AVE+LDD++Y+GAEN++NLFTVRKNS+ ATD+ER RLEVVGEYHLGEFVNRFRHGSLV
Sbjct: 241 MTAVEMLDDEVYVGAENSYNLFTVRKNSDAATDDERARLEVVGEYHLGEFVNRFRHGSLV 300

Query: 659 MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
           MRLPDSD+GQIPTVIFGT+NGVIG+IASLPH+QY+FLEKLQ+ L K IKGVG L+HEQWR
Sbjct: 301 MRLPDSDIGQIPTVIFGTINGVIGIIASLPHDQYIFLEKLQSTLVKYIKGVGNLSHEQWR 360

Query: 719 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
           SF+N+KKT +A+NFLDGDLIESFLDLSR++M+E+SK M V VEEL KRVEELTRLH
Sbjct: 361 SFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSKRVEELTRLH 416


>gi|357623954|gb|EHJ74904.1| putative DNA repair protein xp-e [Danaus plexippus]
          Length = 1128

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/809 (47%), Positives = 526/809 (65%), Gaps = 57/809 (7%)

Query: 11   LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRN 70
            L++L    D    YV+ +E + +L PIVD CVVDLERQGQ Q++TCSGA+K GSLRI+RN
Sbjct: 332  LVRLAAVRDDASQYVQPMETFTSLAPIVDMCVVDLERQGQNQLITCSGAFKMGSLRIIRN 391

Query: 71   GIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
            GIGI EQAS++L GIKGMW+L        DT LV+SF+ +TR+L +N E E+EETEI+GF
Sbjct: 392  GIGIQEQASIDLPGIKGMWALTLGQGPHHDT-LVLSFVGQTRVLTLNGE-EVEETEIKGF 449

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN--EWKSPPGYSVNVATANASQVL 188
             S  QT F  +  ++QL+QVT   +RL+            W +P G +V+V +   ++ +
Sbjct: 450  VSDRQTFFTGNVCHDQLIQVTDEGIRLIGRGPGGWNGVAAW-APAGRAVSVVSCGETRAV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A  G  +  + I  G L  +    +  E++CLD+ P GE      +  VG+WTDISVR+
Sbjct: 509  -AAAGLRIYLVAIKQGALELISEVCMNEEVACLDLGPGGEE----ALLGVGLWTDISVRV 563

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LPDL  +  E L GEIIPRS+L+C  EG+ YLLCALGDG +  F ++  +G LT++KK
Sbjct: 564  LKLPDLRPLHTEKLSGEIIPRSLLICVLEGVCYLLCALGDGSMFYFTVDPDSGVLTNKKK 623

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP  LR+F S +TT++FA SDRPTVI+SSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 624  VTLGTQPTVLRSFRSLSTTNIFACSDRPTVIFSSNHKLVFSNVNLKEVAHMCSLNAVAYP 683

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL---------- 418
            DSLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + ++          
Sbjct: 684  DSLALATDSTVTIGTIDEIQKLHIRTVPLGETPRRIAYQEASQTFGVITMRVDKVEWTGG 743

Query: 419  -----------------------KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 455
                                   K+     + E+H + +LD  TFE +  + L   E+  
Sbjct: 744  CGSLVRPSASTAAASASAAAPPSKHAPAPLDLELHNLLILDHHTFEVLHAHQLLANEFAM 803

Query: 456  SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 515
            S++SC  +DD N YY VGTA + PEE+EP +GRIL+F   +GKL  +AEKE KG  Y+L 
Sbjct: 804  SLVSCKLADDPNHYYAVGTAILNPEESEPKQGRILLFHWCEGKLTQVAEKEIKGGCYTLV 863

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++ +GDFI+VGDLM+S+
Sbjct: 864  EFNGKLLASINSTVRLFEWT----SEKELRLECSHFNNIVALYLKVKGDFILVGDLMRSM 919

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            SLL YK  EG+ EE ARDY+ NWM+AVEILDDD +LGAEN+FNLF  +K+S   TDEER 
Sbjct: 920  SLLQYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENSFNLFVCQKDSAATTDEERQ 979

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 695
            ++  +G++H+G+ VN  R G+LV +L D+       V+  TV+G I ++  L  E + FL
Sbjct: 980  QMGYMGQFHVGDMVNVMRRGALVAQLADTAAPVARPVLLATVSGAICLVVQLSQELFDFL 1039

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
             +L+  L   IK VG + H  WRSFN + KT  A+ F+DGDLIESFLDLSR    E  + 
Sbjct: 1040 HQLEERLTHTIKSVGKIPHSFWRSFNTDIKTEPAEGFIDGDLIESFLDLSRDMQQETLQG 1099

Query: 756  MNV----------SVEELCKRVEELTRLH 774
            + +          +V++L K VE+LTR+H
Sbjct: 1100 LQIDDGGGMMRDATVDDLIKIVEDLTRIH 1128


>gi|195500686|ref|XP_002097479.1| GE26244 [Drosophila yakuba]
 gi|194183580|gb|EDW97191.1| GE26244 [Drosophila yakuba]
          Length = 1140

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/821 (47%), Positives = 532/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++LN +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLNSEA-IDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+Q++QVTS SVRLVSS ++ L  EW+     S+ V + N +Q++
Sbjct: 449  GFASDLQTFLCSNVDYDQVIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    + Y+ I DG L E     LEYE++CLDI P+ E  + S + AVG+WTDIS  I
Sbjct: 509  VASAC-DIFYIVIEDGSLREQSRRTLEYEVACLDITPLDETQTKSDLVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  MSLPDLKTIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHH 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
              + E   S++S    DD N YY V T+ V+PEE EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGRIIIFHYHENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  LQ  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLQERLKKIIKSVGKIEHTYYRNFQINNKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DLSR +M +    +  T+N       VE++ K VE+LTR+H
Sbjct: 1100 DLSREKMRDSVQGLELTLNGERKGADVEDVIKIVEDLTRMH 1140


>gi|194901554|ref|XP_001980317.1| GG19434 [Drosophila erecta]
 gi|190652020|gb|EDV49275.1| GG19434 [Drosophila erecta]
          Length = 1140

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/821 (47%), Positives = 530/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++LN +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLNSEA-IDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+QL+QVTS SVRLVSS ++ L  EW+     S+ V + N +Q++
Sbjct: 449  GFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    L Y+ I DG L E     LEYE++CLDI P+ E    S + AVG+WTDIS  I
Sbjct: 509  VASAC-DLFYIVIEDGTLREQSRRTLEYEVACLDITPLDETQKKSDMVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  MSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
              + E   S++S    DD N YY V T+ V+PEE EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGRIIIFHYHENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            DL R +M +  + + ++         VE++ K VE+LTR+H
Sbjct: 1100 DLGREKMRDAVQGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|195571247|ref|XP_002103615.1| GD18880 [Drosophila simulans]
 gi|194199542|gb|EDX13118.1| GD18880 [Drosophila simulans]
          Length = 1140

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/821 (47%), Positives = 530/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++LN +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLNSEA-IDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+QL+QVTS SVRLVSS ++ L  EW+     S+ V + N +Q+L
Sbjct: 449  GFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIL 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    + Y+ I DG L E     L YE++CLDI P+ E    S + AVG+WTDIS  I
Sbjct: 509  VASAC-DIFYIVIEDGNLREQCRRTLAYEVACLDITPLDETQKKSDLVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
              + E   S++S    DD N YY V T+ V+PEE EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVSPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGRIIIFHYNENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            DLSR +M +  + + ++         VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMRDAVQGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|21357503|ref|NP_650257.1| piccolo [Drosophila melanogaster]
 gi|74872881|sp|Q9XYZ5.1|DDB1_DROME RecName: Full=DNA damage-binding protein 1; Short=D-DDB1; AltName:
            Full=Damage-specific DNA-binding protein 1; AltName:
            Full=Protein piccolo
 gi|4928452|gb|AAD33592.1|AF132145_1 damage-specific DNA binding protein DDBa p127 subunit [Drosophila
            melanogaster]
 gi|7299719|gb|AAF54901.1| piccolo [Drosophila melanogaster]
 gi|220942640|gb|ACL83863.1| DDB1-PA [synthetic construct]
          Length = 1140

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/821 (47%), Positives = 529/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++LN +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLNSEA-IDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGVDESPYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+QL+QVTS SVRLVSS ++ L  EW+     ++ V + N +Q+L
Sbjct: 449  GFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRTIGVVSCNTTQIL 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    + Y+ I DG L E     L YE++CLDI P+ E    S + AVG+WTDIS  I
Sbjct: 509  VASAC-DIFYIVIEDGSLREQSRRTLAYEVACLDITPLDETQKKSDLVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   S++S    DD N YY V T+ V+PEE EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVAPETISSLMSAKLGDDPNTYYVVATSLVIPEEPEPKVGRIIIFHYHENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I AL+++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALFLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINSKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            DLSR +M +  + + ++         VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMRDAVQGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|281208174|gb|EFA82352.1| UV-damaged DNA binding protein1 [Polysphondylium pallidum PN500]
          Length = 1054

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/779 (48%), Positives = 540/779 (69%), Gaps = 33/779 (4%)

Query: 10   QLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN   D   GSY+ V++++ NLGPI DFCVVD+E+QGQGQ+VTCSG ++DGSLRI+
Sbjct: 286  QLIRLNSHIDPNTGSYISVIDQFTNLGPITDFCVVDVEKQGQGQLVTCSGTFQDGSLRII 345

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPF-DTFLVVSFISETRILAMNLEDELEETEI 127
            RNGIGI EQAS+EL GI+G+WSL ++++       L+VSFI+ T++L  + E E+EETEI
Sbjct: 346  RNGIGIAEQASIELPGIRGLWSLSNNSNPSSLHRHLIVSFINSTKVLTFSGE-EIEETEI 404

Query: 128  EGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
             GF S   TL+C +    N  +Q+ +  + LV S+S  +R +  +P   S+N+A+ N SQ
Sbjct: 405  AGFDSNATTLYCGNTTENNHFIQIATSGIYLVDSSSL-MRLDQYTPEKGSINLASCNGSQ 463

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            +L++ G  +L YLEI D  L   K AQL+YEISCLDI+ + +  + S + AVG+WTDISV
Sbjct: 464  ILISQGS-NLTYLEISDSKLIIKKEAQLQYEISCLDISLL-DGFTSSPVCAVGLWTDISV 521

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            RI  LP+LN + KE LGGEI+PRS+L   FEG +YLLC+LGDGHL NF  ++    L +R
Sbjct: 522  RILQLPNLNEVCKETLGGEILPRSILFITFEGTNYLLCSLGDGHLFNFTFDVVENLLQER 581

Query: 307  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            KK+SLGT PI L      N+T+VFA+SDRPTVIYS+NKKLLYS +N+K VSH+C FNS A
Sbjct: 582  KKLSLGTTPILL------NSTNVFASSDRPTVIYSNNKKLLYSAINMKVVSHVCSFNSEA 635

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 426
            F DS+AIA E  L IGTID+IQKLHIR++PLGE  RRI + E+  ++A+ +++       
Sbjct: 636  FRDSIAIATESSLVIGTIDEIQKLHIRNVPLGEMARRITYVEEYHSYAVITIQRNDGNNN 695

Query: 427  SEM---------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
            +                 ++V+LL++QTFE  S Y L +FE+G SI++C F +D  +Y  
Sbjct: 696  NNDNDNFNNNNNNGVPLTNYVKLLNEQTFETTSKYALKSFEFGWSIVTCRFKNDDALYVV 755

Query: 472  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 531
            VGTA+    E++ +KGRILVF +ED +L L+ E      VY L  FNG+LLA IN+++Q 
Sbjct: 756  VGTAFHNEVESQQSKGRILVFRIEDNRLILLDEVALPACVYCLLPFNGRLLAGINKRVQA 815

Query: 532  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 591
            + W +    T +L     + GH L+  + +RG F++V DLMKS++LL+ + ++GAI+E A
Sbjct: 816  FNWGV---DTNKLTKAESYSGHTLSHSMVSRGHFVLVADLMKSMTLLV-EDQQGAIKELA 871

Query: 592  RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
            R+    W+S +E++DD+ ++G +N++NL  V+KN+E +++ +   L+ VG++HLGE +N+
Sbjct: 872  RNPLPIWLSRIEMIDDETFIGGDNSYNLIVVQKNAEASSEIDNELLDTVGQFHLGETINK 931

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 711
            F+HGSLV   PD D  ++PT++FGTV+G IGVI S+  + Y F EKLQ  L +V+ GVGG
Sbjct: 932  FKHGSLVTS-PDMDSPKLPTILFGTVSGAIGVIVSISKDDYEFFEKLQKGLNRVVHGVGG 990

Query: 712  LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L  E WRSF+ E  T+ +KNF+DGDLIE+FLDL   +M E  K MN+S+E+  +R+E L
Sbjct: 991  LPFENWRSFSTEHMTIPSKNFIDGDLIETFLDLRHDKMLEAIKDMNISIEDTYRRIESL 1049


>gi|195329354|ref|XP_002031376.1| GM24084 [Drosophila sechellia]
 gi|194120319|gb|EDW42362.1| GM24084 [Drosophila sechellia]
          Length = 1140

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/821 (47%), Positives = 530/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++LN +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLNSEA-IDGSYVVPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDP-FDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+  ++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGVDESSYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+QL+QVTS SVRLVSS ++ L  EW+     S+ V + N +Q+L
Sbjct: 449  GFASDLQTFLCSNVDYDQLIQVTSDSVRLVSSATKALVAEWRPTGDRSIGVVSCNTTQIL 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    + Y+ I DG L E     L YE++CLDI P+ E    S + AVG+WTDIS  I
Sbjct: 509  VASAC-DIFYIVIEDGSLREQSRRTLAYEVACLDITPLDETQKKSDLVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALANKNAVILGTIDEIQKLHIRTVPLGEGPRRIAYQESSQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNFLPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
              + E   S++S    DD N YY V T+ V+PEE EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVSPETISSLMSAQLGDDPNTYYVVATSLVIPEEPEPKVGRIIIFHYNENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H+ +R+F    +   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKLVGKIGHKFYRNFRIHTQVEPSQGFIDGDLIESFL 1099

Query: 743  DLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            DLSR +M +  + + ++         VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMRDAVQGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|195449948|ref|XP_002072297.1| GK22405 [Drosophila willistoni]
 gi|194168382|gb|EDW83283.1| GK22405 [Drosophila willistoni]
          Length = 1140

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/821 (47%), Positives = 531/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +   +GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSEA-IEGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+  TDD P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGTDDSPYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  ++QL+QVTS SVRLV S+S+ L  EW+     S+ V + N +Q++
Sbjct: 449  GFASDLQTFLCANVEHDQLIQVTSDSVRLVKSSSKSLVAEWRPEGDRSIGVVSCNGTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            +A+    + Y+ I DG L E     L YE++CLDI P+ E  + S++ AVG+WTDIS  +
Sbjct: 509  VASAR-DIFYIVIEDGNLQEKCRKTLAYEVACLDITPLDEKQNKSELVAVGLWTDISAVM 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLP L+ I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPSLDTIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDPITGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGP 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRSSASTRAQNITCSSNILPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
              + E   +++S    DD N YY V T+ V+P+E EP  GRI++F   D KL  +AE + 
Sbjct: 808  FVSPETISALMSAKLGDDPNTYYVVATSLVIPDEPEPKVGRIIIFHYHDNKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDEI---------SKTMNVSVEELCKRVEELTRLH 774
            DLSR +M E           +  +  VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMREAVLGLELTLYGERKSADVEDVIKIVEDLTRMH 1140


>gi|195145844|ref|XP_002013900.1| GL24391 [Drosophila persimilis]
 gi|194102843|gb|EDW24886.1| GL24391 [Drosophila persimilis]
          Length = 1140

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/821 (47%), Positives = 530/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +   +GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSE-SIEGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  ++QL+QVTS SVRLV S ++ L  EW+     S+ V + N++Q++
Sbjct: 449  GFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKALICEWRPEGDRSIGVVSCNSTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            LA+    + Y+ I DG L E     L YE++CLDI P+ E  + S + AVG+WTDIS  I
Sbjct: 509  LASAR-DIFYIVIEDGRLVEKSRKTLAYEVACLDITPLDETQNKSDLIAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNILPKPGGNNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   S++S    DD N YY V T+ V+P+E EP  GRI++F   D KL  +AE + 
Sbjct: 808  FVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGRIIIFHYHDSKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DLSR +M +    +  T+N       VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMRDAVLGLELTLNGERKGADVEDVIKIVEDLTRMH 1140


>gi|125774475|ref|XP_001358496.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
 gi|54638233|gb|EAL27635.1| GA20574 [Drosophila pseudoobscura pseudoobscura]
          Length = 1140

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/821 (47%), Positives = 530/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +   +GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSE-SIEGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+ P++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGIDESPYENTLVLAFVGLTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  ++QL+QVTS SVRLV S ++ L  EW+     S+ V + N++Q++
Sbjct: 449  GFASDLQTFLCANVEHDQLIQVTSDSVRLVKSATKALICEWRPEGDRSIGVVSCNSTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            LA+    + Y+ I DG L E     L YE++CLDI P+ E  + S + AVG+WTDIS  I
Sbjct: 509  LASAR-DIFYIVIEDGRLVEKSRKTLAYEVACLDITPLDETQNKSDLIAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNILPKPGGNNSTAANAEVGQEIDVHNLLVIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   S++S    DD N YY V T+ V+P+E EP  GRI++F   D KL  +AE + 
Sbjct: 808  FVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGRIIIFHYHDNKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I ALY++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALYLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DLSR +M +    +  T+N       VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMRDAVLGLELTLNGERKGADVEDVIKIVEDLTRMH 1140


>gi|47230701|emb|CAF99894.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 953

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/814 (47%), Positives = 517/814 (63%), Gaps = 113/814 (13%)

Query: 11  LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRN 70
           L +LN+  + +GS+V V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+RN
Sbjct: 203 LSELNVDSNDQGSFVTVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRN 262

Query: 71  GIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
           GIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L ++ E E+EETE+ GF
Sbjct: 263 GIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQTRVLMLSGE-EVEETELPGF 321

Query: 131 CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
               QT +C +  +NQL+Q+TSGSVRLV   S+ L +EW+ P G +++VA  N +QV+LA
Sbjct: 322 VDNQQTFYCGNVAHNQLIQITSGSVRLVLQDSKALVSEWREPQGRNISVAACNHTQVVLA 381

Query: 191 TGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            G   L YL+I  G L ++   ++E+E++CLDI P+GE  + S + AVG+WTDIS R+  
Sbjct: 382 VGRA-LYYLQILAGELKQISTTEMEHEVACLDITPLGEAGAESPLCAVGLWTDISARVLK 440

Query: 251 LPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
           LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++RKKV+
Sbjct: 441 LPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLCALGDGALFYFGLDLQTGALSERKKVT 500

Query: 311 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
           LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PDS
Sbjct: 501 LGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDS 560

Query: 371 LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--------- 421
           LA+A    LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S + +         
Sbjct: 561 LALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRMEIQDVSGTTS 620

Query: 422 ------------------------------SCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                         S  EE E+H + ++D  TFE +  +     
Sbjct: 621 PVRPSASTQALSSSVSSSKLFPSSTSPHESSFGEEVEVHNLLVVDQHTFEVLHAHQFLPS 680

Query: 452 EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
           EY  S++SC    D ++         +P E         VF                   
Sbjct: 681 EYALSLVSCRLGKDPSL-------QTIPNE--------CVF------------------- 706

Query: 512 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
                           +++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDL
Sbjct: 707 ----------------QVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGDL 746

Query: 572 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
           M+S+ LL YK  EG  EE ARD+N NWMSA+EILDDD +LGAEN FNLF  +K+S   TD
Sbjct: 747 MRSVLLLAYKPMEGNFEEIARDFNPNWMSAIEILDDDNFLGAENAFNLFVCQKDSAATTD 806

Query: 632 EERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
           EER  L+ VG +HLGEFVN F HGSLV++ L ++      +V+FGTVNG+IG++ SL   
Sbjct: 807 EERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGETSTPTQGSVLFGTVNGMIGLVTSLSEG 866

Query: 691 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
            Y  L  LQ  L KVIK         WRSF+ E+KT  A  F+DGDLIESFLDL R +M 
Sbjct: 867 WYSLLLDLQNRLNKVIKTT-------WRSFHTERKTEQATGFIDGDLIESFLDLGRAKMQ 919

Query: 751 EISKTMNV----------SVEELCKRVEELTRLH 774
           E+  T+ +          +V+E+ K VEELTR+H
Sbjct: 920 EVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH 953


>gi|194741158|ref|XP_001953056.1| GF17579 [Drosophila ananassae]
 gi|190626115|gb|EDV41639.1| GF17579 [Drosophila ananassae]
          Length = 1140

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/822 (47%), Positives = 531/822 (64%), Gaps = 69/822 (8%)

Query: 10   QLIKLNLQPDA-KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QL++L+   DA  GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+
Sbjct: 331  QLVRLS--SDAIDGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRII 388

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEI 127
            R GIGI E A ++L GIKGMWSL+   DD P++  LV++F+  TRIL ++ E E+EETEI
Sbjct: 389  RIGIGIQEHACIDLPGIKGMWSLKVGIDDSPYENTLVLAFVGHTRILTLSGE-EVEETEI 447

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             GF S  QT  C +  ++Q++QVTS SVRLV S +++L  EW+     S+ V + N++Q+
Sbjct: 448  PGFASDLQTFLCANVEHDQIIQVTSDSVRLVKSATKDLVAEWRPEGDRSIGVVSCNSTQI 507

Query: 188  LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
            ++A+    + Y+ I DG L E     L YE++CLDI P+ E+ + S + AVG+WTDIS  
Sbjct: 508  VVASAR-DIFYIVIEDGKLVEKSRKTLAYEVACLDITPLDESQNKSDLVAVGLWTDISAV 566

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            I SLP+L  I  E L GEIIPRS+L+  FEGI YLLCALGDG +  F+++  TG+LTD+K
Sbjct: 567  ILSLPELETIYTEKLSGEIIPRSILMTTFEGIHYLLCALGDGSMYYFIMDQTTGQLTDKK 626

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            KV+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+
Sbjct: 627  KVTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAY 686

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-------- 419
            PDSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+        
Sbjct: 687  PDSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGG 746

Query: 420  ---------------------------------NQSCAEESEMHFVRLLDDQTFEFISTY 446
                                             N    +E ++H + ++D  TFE +  +
Sbjct: 747  TKPLRNSASTQAQNITYSSNILPKPGTGTSTATNAEVGQEIDVHNLLVIDQNTFEVLHAH 806

Query: 447  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE 506
                 E   S++S    DD N YY V T+ V+P+E EP  GRI++F   D KL  +AE +
Sbjct: 807  QFVAPETISSLMSAKLGDDPNTYYVVATSLVIPDEPEPKVGRIIIFHYHDNKLTQVAETK 866

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
              G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I AL+++ +GDFI
Sbjct: 867  VDGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALFLKAKGDFI 922

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            +VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG+E N NLF  +K+S
Sbjct: 923  LVGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGSETNGNLFVCQKDS 982

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVI 681
               TDEER  L  +  +HLG+ VN FRHGSLVM+    +VG+  T     V++GT NG I
Sbjct: 983  AATTDEERQLLPELARFHLGDTVNVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAI 1038

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 741
            G++  +P + Y FL  L+  L+K+IK VG + H  +R+F    K   ++ F+DGDLIESF
Sbjct: 1039 GIVTQIPQDFYDFLHGLEERLKKIIKSVGKIEHTYYRNFQINTKVEPSEGFIDGDLIESF 1098

Query: 742  LDLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            LDL R +M +  + + ++         VE++ K VE+LTR+H
Sbjct: 1099 LDLGRDKMRDAVQGLEITLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|195395112|ref|XP_002056180.1| GJ10363 [Drosophila virilis]
 gi|194142889|gb|EDW59292.1| GJ10363 [Drosophila virilis]
          Length = 1140

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/821 (47%), Positives = 531/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +    GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSEA-IDGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   DD  ++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGIDDSAYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  QT  C +  Y+QL+QVT+ SVRLV S ++ L  EWK     S+ V + N++Q++
Sbjct: 449  GFASDLQTFLCANVDYDQLIQVTAESVRLVKSATKTLVGEWKPEGDRSIGVVSCNSTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A+    + Y+ I DG L E     L YE++CLD+ P+ E  + S++ AVG+WTDIS  I
Sbjct: 509  AASAR-EIFYISIEDGSLVEKCRKTLPYEVACLDVTPLDEKQTKSELVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
              LPDL  I  E L GEIIPRS+L+  FE I+YLLCALGDG +  F+L+  TG+LTD+KK
Sbjct: 568  LRLPDLETIYTEKLSGEIIPRSILMTTFEDINYLLCALGDGSMYYFILDRTTGQLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  ------------NQSCA--------------------EESEMHFVRLLDDQTFEFISTYP 447
                        N SC+                    +E ++H + ++D  TFE + ++ 
Sbjct: 748  KPLRNSASTQAQNSSCSSNILPKPGGGNSTAANAEVGQEIDVHNLLVIDQNTFEVLHSHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   S++S    DD N YY V T+ V P+E EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVPPETISSLMSAKLGDDPNTYYVVATSLVFPDEPEPKVGRIIIFHYNENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I AL+++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALFLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG E + NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHDNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ +N FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTINVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG ++H  +R++    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIDHTYYRNYQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DL+R +M E    +  T+N       VE++ K VE+LTR+H
Sbjct: 1100 DLNRDKMREAVSGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|195108657|ref|XP_001998909.1| GI23368 [Drosophila mojavensis]
 gi|193915503|gb|EDW14370.1| GI23368 [Drosophila mojavensis]
          Length = 1140

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/821 (46%), Positives = 527/821 (64%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +P   GSYV  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSEP-IDGSYVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDP-FDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   DD  ++  LV++F+  TRIL ++ E E+EETEI 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGIDDSVYENTLVLAFVGHTRILTLSGE-EVEETEIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  Q+  C +  Y+QL+QVT+ SVRLV S+++ L  EWK     S+ V + N++Q++
Sbjct: 449  GFASDLQSFLCANVEYDQLIQVTAESVRLVKSSTKALVGEWKPEGDRSIGVVSCNSTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A+    + Y+ I DG L E     L YE++CLD+ P+ E  + S++ AVG+WTDIS  I
Sbjct: 509  AASAR-EIFYIAIEDGSLVEKCRKTLAYEVACLDVTPLDEKQNKSELVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FE I YLLCALGDG +  F+L+  TG LTD+KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEDIHYLLCALGDGSMYYFILDRTTGFLTDKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCSSNMLPKPGGGNSTAANAEVGQEIDVHNLLIIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   +++S    DD N YY V T+ V P+E EP  GRI++F   + KL  +AE + 
Sbjct: 808  FVPPETISALMSAKLGDDPNTYYVVATSLVFPDEPEPKVGRIIIFHYHENKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I AL+++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALFLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG E + NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHDNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ +N FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTINVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG ++H  +R++    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIDHTYYRNYQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DLSR +M E    +  T+N       VE++ K VE+LTR+H
Sbjct: 1100 DLSRDKMHEAVTGLELTLNGERKSADVEDVIKIVEDLTRMH 1140


>gi|395544366|ref|XP_003774082.1| PREDICTED: DNA damage-binding protein 1 [Sarcophilus harrisii]
          Length = 1239

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/713 (51%), Positives = 476/713 (66%), Gaps = 56/713 (7%)

Query: 112  RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKS 171
            R+L +N E E+EETE+ GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK 
Sbjct: 533  RVLMLNGE-EVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKE 591

Query: 172  PPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS 231
            P G +++VA+ N+SQV++A G   L YL+I    L ++ H ++E+E++CLDI P+G++  
Sbjct: 592  PQGKNISVASCNSSQVVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 650

Query: 232  YSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHL 291
             S + A+G+WTDIS RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L
Sbjct: 651  MSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGAL 710

Query: 292  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
              F L+++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNV
Sbjct: 711  FYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV 770

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 411
            NLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+
Sbjct: 771  NLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQ 830

Query: 412  TFAICSLK---------------------------------------NQSCAEESEMHFV 432
             F + S +                                         S  EE E+H +
Sbjct: 831  CFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNL 890

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF 492
             ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF
Sbjct: 891  LIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVF 950

Query: 493  IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 552
               DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ 
Sbjct: 951  QYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYN 1006

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
            +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LG
Sbjct: 1007 NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG 1066

Query: 613  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPT 671
            AEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +
Sbjct: 1067 AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS 1126

Query: 672  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
            V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF+ E+KT  A  
Sbjct: 1127 VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG 1186

Query: 732  FLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEELTRLH 774
            F+DGDLIESFLD+SR +M E+   +            + ++L K VEELTR+H
Sbjct: 1187 FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH 1239



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 72/83 (86%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 337 QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 396

Query: 70  NGIGINEQASVELQGIKGMWSLR 92
           NGIGI+E AS++L GIKG+W LR
Sbjct: 397 NGIGIHEHASIDLPGIKGLWPLR 419


>gi|432089478|gb|ELK23419.1| DNA damage-binding protein 1 [Myotis davidii]
          Length = 1047

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/663 (53%), Positives = 460/663 (69%), Gaps = 45/663 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332 QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392 NGIGIHEHASIDLPGIKGLWPLRSDPTRETDDTLVLSFVGQTRVLMLNGE-EVEETELTG 450

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F  + QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451 FVDEQQTFFCGNVAHQQLIQITSASVRLVSQDPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L  L+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511 AVGRA-LYCLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570 KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 750 TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810 NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870 VYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+    T
Sbjct: 926 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDRSFHT 985

Query: 631 DEE 633
           + +
Sbjct: 986 ERK 988



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 10/67 (14%)

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRV 767
            RSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K V
Sbjct: 981  RSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVV 1040

Query: 768  EELTRLH 774
            EELTR+H
Sbjct: 1041 EELTRIH 1047


>gi|16197726|emb|CAC94909.1| damaged-DNA recognition protein 1 [Mus musculus]
          Length = 994

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/656 (53%), Positives = 457/656 (69%), Gaps = 45/656 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332 QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQV++
Sbjct: 451 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPRAKNISVASCNSSQVVV 510

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511 AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKK+
Sbjct: 570 KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKM 629

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVN KEV++MCP NS  +PD
Sbjct: 630 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNFKEVNYMCPLNSDGYPD 689

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGT 749

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 750 TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810 NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870 VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
           LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S
Sbjct: 926 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 981


>gi|195037449|ref|XP_001990173.1| GH18378 [Drosophila grimshawi]
 gi|193894369|gb|EDV93235.1| GH18378 [Drosophila grimshawi]
          Length = 1140

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/821 (46%), Positives = 523/821 (63%), Gaps = 67/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+ +    G++V  +E + NL PI+D  VVDL+RQGQGQ++TCSG++KDGSLRI+R
Sbjct: 331  QLVRLSSEA-IDGTFVIPVENFTNLAPILDIAVVDLDRQGQGQIITCSGSFKDGSLRIIR 389

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDP-FDTFLVVSFISETRILAMNLEDELEETEIE 128
             GIGI E A ++L GIKGMWSL+   D+  ++  LV++F+  TRIL ++ E E+EET+I 
Sbjct: 390  IGIGIQEHACIDLPGIKGMWSLKVGIDESSYENTLVLAFVGHTRILTLSGE-EVEETDIP 448

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF S  Q+  C +  Y+QL+QVT+ SVRLV S ++ L  EWK     S+ V + N +Q++
Sbjct: 449  GFASDLQSFLCANVDYDQLIQVTAESVRLVKSATKALVGEWKPEGDRSIGVVSCNTTQIV 508

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             A+    + Y+ I DG L E     L YE++CLD+ P+ E  + S + AVG+WTDIS  I
Sbjct: 509  AASAR-EIFYISIEDGSLVEKCRKILPYEVACLDVTPLDEKQNKSDLVAVGLWTDISAVI 567

Query: 249  FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             SLPDL  I  E L GEIIPRS+L+  FE I YLLCALGDG +  F+L+  TG+LT++KK
Sbjct: 568  LSLPDLETIYTEKLSGEIIPRSILMTTFEDIHYLLCALGDGSMYYFILDKTTGQLTEKKK 627

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
            V+LGTQP TLRTF S  TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+P
Sbjct: 628  VTLGTQPTTLRTFRSFATTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAQAYP 687

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
            DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TFA+ +L+         
Sbjct: 688  DSLALATKNSVILGTIDEIQKLHIRTVPLGEGPRRIAYQEASQTFAVSTLRIDVHGRGGA 747

Query: 420  --------------------------------NQSCAEESEMHFVRLLDDQTFEFISTYP 447
                                            N    +E ++H + ++D  TFE +  + 
Sbjct: 748  KPLRNSASTQAQNITCGSNILPKPGGGNSTAANAEVGQEIDVHNLLIIDQNTFEVLHAHQ 807

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKET 507
                E   +++S    DD N YY V T+ V PEE EP  GRI++F   D KL  +AE + 
Sbjct: 808  FVPPETISTLMSAKLGDDPNTYYVVATSLVYPEEPEPKVGRIIIFHYNDNKLTQVAETKV 867

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             G  Y+L  FNGK+LA I   ++LY+W       +EL+ EC     I AL+++ +GDFI+
Sbjct: 868  DGTCYALVEFNGKVLAGIGSFVRLYEWT----NEKELRMECNIQNMIAALFLKAKGDFIL 923

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+SI+LL +K  EG   E ARD    WM AVEILDDD +LG E + NLF  +K+S 
Sbjct: 924  VGDLMRSITLLQHKQMEGIFVEIARDCEPKWMRAVEILDDDTFLGCETHDNLFVCQKDSA 983

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-----VIFGTVNGVIG 682
              TDEER  L  +  +HLG+ +N FRHGSLVM+    +VG+  T     V++GT NG IG
Sbjct: 984  ATTDEERQLLPELARFHLGDTINVFRHGSLVMQ----NVGERTTPINGCVLYGTCNGAIG 1039

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            ++  +P + Y FL  L+  L+K+IK VG ++H  +R++    K   ++ F+DGDLIESFL
Sbjct: 1040 IVTQIPQDFYDFLHGLEERLKKIIKSVGKIDHTYYRNYQINTKVEPSEGFIDGDLIESFL 1099

Query: 743  DLSRTRMDE----ISKTMN-----VSVEELCKRVEELTRLH 774
            DL+R +M E    +  TM        VE++ K VE+LTR+H
Sbjct: 1100 DLNREKMREAVLGLELTMGGERKAADVEDVIKIVEDLTRMH 1140


>gi|148709424|gb|EDL41370.1| damage specific DNA binding protein 1 [Mus musculus]
          Length = 968

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/643 (53%), Positives = 447/643 (69%), Gaps = 45/643 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332 QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS      D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 392 NGIGIHEHASIDLPGIKGLWPLRSDPGRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 450

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P G +++VA+ N+SQV++
Sbjct: 451 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVV 510

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS RI 
Sbjct: 511 AVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 569

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DRKKV
Sbjct: 570 KLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKV 629

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 689

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ F + S +          
Sbjct: 690 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDSSGGT 749

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 750 TALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQ 809

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810 NEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 869

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGD
Sbjct: 870 VYSMVEFNGKLLASINSTVRLYEWTTE----KELRTECNHYNNIMALYLKTKGDFILVGD 925

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
           LM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD + G+
Sbjct: 926 LMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFTGS 968


>gi|449684814|ref|XP_004210722.1| PREDICTED: DNA damage-binding protein 1-like, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/777 (46%), Positives = 496/777 (63%), Gaps = 88/777 (11%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           Q++KLN +PD KGS++ +L  + NLGPI+D CVVDLERQGQ Q+VTCSGA+KDGSLRI+R
Sbjct: 25  QIVKLNTEPDKKGSFITILRSFTNLGPILDMCVVDLERQGQDQLVTCSGAFKDGSLRIIR 84

Query: 70  NGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
           NGIGINE AS++L GI G+W L+  S   D  DT +V+SF+ ++R+L+++  +E+EE EI
Sbjct: 85  NGIGINELASIDLAGIMGLWCLKVNSINSDLHDT-MVLSFVGQSRVLSLS-TEEVEEIEI 142

Query: 128 EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
           EGF S  QT +C +  +NQL+Q                 + W  P    ++VA +N+ Q+
Sbjct: 143 EGFSSDKQTTYCANVNFNQLIQ------------KHFFFSNWLPPDNKHISVAVSNSFQI 190

Query: 188 LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
           +++ G   L+YLE+ D  + ++ H  LEYE++CLD++P G N + S    VG+WTDISVR
Sbjct: 191 VVSLGK-ELIYLEVEDSNIKQISHTVLEYEVACLDLSPKGSNETTSDRLCVGLWTDISVR 249

Query: 248 IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
           I +LP+L  +  E L GE+IPRS+L+  FE   YLLCALGDG L  FLLN  TG L+D+K
Sbjct: 250 ILALPNLEELYVEKLSGEMIPRSILMITFEDKEYLLCALGDGSLFYFLLNRLTGVLSDQK 309

Query: 308 KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
           KVSLGT+P  +++F S ++THVFA SDRPTVIYSSN KL++SNVNLKEV +M P N+ A+
Sbjct: 310 KVSLGTKPTVIQSFKSGSSTHVFACSDRPTVIYSSNNKLVFSNVNLKEVCYMSPLNTQAY 369

Query: 368 PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 427
           P+S           G ID I K+      L  H  +    E + +   CS          
Sbjct: 370 PNSFY--------SGHIDSIYKMFF----LVTHSHQFLENEWATSLTSCS---------- 407

Query: 428 EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
                                             FS+D N YYCVGT+ V PEE+EP +G
Sbjct: 408 ----------------------------------FSNDPNTYYCVGTSMVYPEESEPKEG 433

Query: 488 RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
           +I++F + +GKL  I  K   GAVY L  FNGKLLA +N  + +Y+W       +EL+ E
Sbjct: 434 KIILFQLFEGKLVQIGSKTVNGAVYVLQGFNGKLLAGVNSLVSVYEWT----SDKELKQE 489

Query: 548 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
           C +H  ILALY++++GDFI+VGDLM+S++LL YK   G +EE A D++ NWM+AVEI+DD
Sbjct: 490 CCYHNTILALYLKSKGDFILVGDLMRSMTLLAYK-PLGRLEEIAHDFSPNWMTAVEIIDD 548

Query: 608 DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
           D +LGAEN+FNLF  +K++    DEER  L+ +G+YHLG+FVN F+HGSLVM      + 
Sbjct: 549 DTFLGAENSFNLFICQKDNSSVNDEERHHLQTIGKYHLGDFVNVFKHGSLVMHHSTEQLT 608

Query: 668 QI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 726
            I  ++++GTV G IG++A LP   + FL ++Q  L K IK VG + HE WRSF N+KKT
Sbjct: 609 PISSSILYGTVRGAIGLVAGLPKNTFDFLSQVQEKLSKTIKSVGKIEHEFWRSFYNDKKT 668

Query: 727 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELCKRVEELTRLH 774
             A   +DGDLIES LDL+RT++ E+   + +         +V++L K VEEL+R+H
Sbjct: 669 DLAVGCVDGDLIESCLDLTRTQLHEVVSGLEIEEAGIKRECTVDDLIKVVEELSRIH 725


>gi|330792580|ref|XP_003284366.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
 gi|325085712|gb|EGC39114.1| hypothetical protein DICPUDRAFT_86223 [Dictyostelium purpureum]
          Length = 1064

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/788 (45%), Positives = 528/788 (67%), Gaps = 31/788 (3%)

Query: 10   QLIKLNLQPD-AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN + D A  SY+  LE + N+GPIVDFC+VD E+QGQ Q+VTCSG Y+DG+LR++
Sbjct: 280  QLIRLNTEKDPATDSYISHLENFTNIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLRVI 339

Query: 69   RNGIGINEQASVELQGIKGMWSLR----SSTDDPFDTFLVVSFISETRILAMNLEDELEE 124
            RNGIGI E+A +EL+G+KG+W ++    S   +P D +L+VSFI  T++L     +E+EE
Sbjct: 340  RNGIGIAEKALIELEGVKGLWPIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQ-GEEIEE 398

Query: 125  TEIEGFCSQTQTLFCHDAIY-NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            TE EG  S + T+ C +    N +VQVT+ ++ L++  + +  ++WKSP G  +N+ ++N
Sbjct: 399  TEFEGLDSNSSTILCSNIDKENVIVQVTNQAINLINPITFKRVDQWKSPSGSPINLVSSN 458

Query: 184  ASQVLLATGGGHLVYLEIGDGILTE-VKHAQLEYEISCLDINPIGE-NPSYSQIAAVGMW 241
             SQ+ L+ G   L Y EI +    E +K  +L +EISC+DI+P+     S SQI AVG+W
Sbjct: 459  QSQIALSIGKS-LYYFEINEQSRIELIKEIELPHEISCIDISPLDSFMDSRSQICAVGLW 517

Query: 242  TDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG 301
            TDI++R+F LP L  I KE LGGEIIPRS+L+ +FEGI Y+ C+LGDGHL  F +++   
Sbjct: 518  TDITLRLFKLPTLEEIHKEPLGGEIIPRSILMISFEGIDYIFCSLGDGHLFKFKIDIANN 577

Query: 302  -ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             +L D++K++LGTQPI L+ F  KNT ++FA SDRPTVIYS+NKKL YS VNLKEV+++ 
Sbjct: 578  WKLFDKRKLTLGTQPIILKKFKLKNTINIFALSDRPTVIYSNNKKLFYSVVNLKEVTNVT 637

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICHQEQSRTFAICSLK 419
             FNS AFP S+AI+ E  L IGTID+IQKLHI++I L GE  RRI H E+   +A+ ++K
Sbjct: 638  SFNSDAFPGSMAISSESSLIIGTIDEIQKLHIKTISLNGEMARRIVHLEEYSCYAVITIK 697

Query: 420  -----------NQSCAEE--SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 466
                       N +  +E   E+ +VRL DDQTFE +S++ L+ +E G S+ S  F DD 
Sbjct: 698  TNEDIISGNGENATTIDEVEEEVSYVRLFDDQTFEPLSSFRLEHYEMGWSLTSTKFDDDP 757

Query: 467  NVYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI 525
              Y  VGT+  +P+    T GR+L+F I E  KL L+ E   +  V  L+ FNG+L+AA+
Sbjct: 758  CTYLAVGTSINIPDRQ--TSGRVLLFNINEAKKLVLLEEISFRSGVLYLHQFNGRLIAAV 815

Query: 526  NQKIQLYKWML-RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
             +++   ++   ++   + + SE  H GH + L + +RG F++VGD+MKS+SLL  + E 
Sbjct: 816  LKRLYSIRYSYSKEKNCKVISSENVHKGHTMILKLASRGHFMLVGDMMKSMSLL-GQSEN 874

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
            G++ + A++    W+ ++ +++DD ++G+E + N   V+KN++   + ER  L+ VG YH
Sbjct: 875  GSLVQIAKNPQPIWIRSIAMINDDYFIGSETSNNFVVVKKNNDSTNELERELLDSVGHYH 934

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            +GE +N    GSLV RLPDSD   IPT+++ +VNG IGVIAS+  E Y F  KLQ  L +
Sbjct: 935  IGESINSMLCGSLV-RLPDSDAPPIPTILYASVNGSIGVIASISKEDYEFFSKLQKGLNR 993

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
            V+ G+GG  HE WR+F+N+  TV+++NF+DGDLIE F DL    M ++ + MNV+++E  
Sbjct: 994  VVNGIGGFTHESWRAFSNDHHTVESRNFIDGDLIEMFPDLKIESMAKVIQDMNVTLDETL 1053

Query: 765  KRVEELTR 772
            KR+E L +
Sbjct: 1054 KRIESLMQ 1061


>gi|255316764|gb|ACU01763.1| putative DNA damage binding protein [Brachypodium distachyon]
          Length = 384

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/384 (81%), Positives = 352/384 (91%), Gaps = 1/384 (0%)

Query: 392 IRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
           IR+IPL E  RRICHQEQSRT A CS K N +  EESE HF+RLLD QTFEF+ST+PLD 
Sbjct: 1   IRTIPLNEQARRICHQEQSRTLAFCSFKYNPNSMEESEAHFIRLLDHQTFEFLSTHPLDQ 60

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
           +E GCS++SCSFSDD+N YYCVGTAYVLPEENEPTKGRILVF VEDG+LQLI EKETKGA
Sbjct: 61  YECGCSMISCSFSDDNNFYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGA 120

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
           VYSLNAFNGKLLAAINQKIQLYKWM R+DG+ ELQSECGHHGHILAL+ QTRGDFIVVGD
Sbjct: 121 VYSLNAFNGKLLAAINQKIQLYKWMTREDGSHELQSECGHHGHILALFTQTRGDFIVVGD 180

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           LMKSISLL+YKHEE AIEE ARDYNANWM+AVE++DDDIY+GAEN++NLFTVRKNS+ AT
Sbjct: 181 LMKSISLLVYKHEESAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAAT 240

Query: 631 DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
           DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD+++GQIPTVIFGT+NGVIG+IASLPH+
Sbjct: 241 DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDTEMGQIPTVIFGTINGVIGIIASLPHD 300

Query: 691 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
           QY+FLEKLQ+ L K IKGVG L+H+QWRSF+NEKKT +A+NFLDGDLIESFLDL+R++M+
Sbjct: 301 QYVFLEKLQSILGKFIKGVGSLSHDQWRSFHNEKKTAEARNFLDGDLIESFLDLNRSKME 360

Query: 751 EISKTMNVSVEELCKRVEELTRLH 774
           E+SK M VSVE L KRVEELTRLH
Sbjct: 361 EVSKGMGVSVENLSKRVEELTRLH 384


>gi|391335522|ref|XP_003742140.1| PREDICTED: DNA damage-binding protein 1-like [Metaseiulus
            occidentalis]
          Length = 1154

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/840 (44%), Positives = 503/840 (59%), Gaps = 90/840 (10%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+++    A+  ++EVLE Y NLG I+D  VVDLE+QGQ Q++TCSG    GSLRI+R
Sbjct: 330  QLIRMH----AQEPFIEVLESYTNLGAILDMIVVDLEKQGQDQLITCSGQGACGSLRIIR 385

Query: 70   NGIGINEQASVELQGIKGMWSLRSST-----DDPFDTFLVVSFISETRILAMNLEDELEE 124
            NGIGI+E A VEL GIKG+W+LR +T     D P D  LV+SF+ +TR+   +  +ELE+
Sbjct: 386  NGIGIHELACVELSGIKGIWALRMNTAQLEEDTPTDDTLVLSFVGQTRVFNCSSTEELEQ 445

Query: 125  TEIEG-FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
              +   F   +QT    + + NQ++QVT   V L+S TS+   ++W  P G  +     N
Sbjct: 446  VTLPAAFDIDSQTFCARNVLGNQVIQVTDKRVNLISVTSKTRVDQWFPPEGEIITQCACN 505

Query: 184  ASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTD 243
              QV LA     LVYLEI DG LTE+K  +LEYEI+C+D+N + +    + I  VG+WTD
Sbjct: 506  DVQVALALKNV-LVYLEIRDGSLTEIKRTRLEYEIACMDLNTLDKEGDQTSIITVGLWTD 564

Query: 244  ISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG-ISYLLCALGDGHLLNFLLNMKTGE 302
            +S+ + SLPDL  + ++ L  ++IPRSVL   FEG   YLLC L DG L  + L   TGE
Sbjct: 565  VSILVLSLPDLEQLFRQELPKDVIPRSVLKITFEGSTDYLLCTLADGSLFYYHL-ASTGE 623

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            LT +K+V+LGTQP TLR F S+ T  VFA SDRPTVIYSS  KL++S VNL+EV HMC F
Sbjct: 624  LTGQKRVTLGTQPTTLRKFRSQRTWSVFACSDRPTVIYSSTSKLVFSKVNLREVKHMCSF 683

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI------- 415
            +S AFPDSLA+A E E  IGTID IQKLHIR++PLGE PRRI +QE++ TF +       
Sbjct: 684  SSEAFPDSLALASEDEFVIGTIDAIQKLHIRTVPLGESPRRIAYQEETGTFGVIVSRSDM 743

Query: 416  -CSLKNQS-------------------------CAEE--------------------SEM 429
             CS +  S                         CA+                      E 
Sbjct: 744  ACSTRCASLDAPNKSNASPYAWHKDFSSFGHTQCADRVDSGIPSCSSTSLQRPPSGCDET 803

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
              + ++D  TFE +        EYG SI S     D N YY VGTA++  EE+EP  GRI
Sbjct: 804  FSLLIIDQNTFEVLHAMQFCPNEYGVSICSAKLGSDPNPYYIVGTAFINQEESEPKVGRI 863

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             V    DGKL+ IAEKE  GA YS+  F+ KL  AIN  ++LY W    +  ++LQSEC 
Sbjct: 864  FVLRWHDGKLETIAEKEAAGAPYSIREFHQKLAIAINSTVRLYSW----NAEKDLQSECT 919

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
               +I+ L+++  GD+I+VGDLM+S++LL Y  +  ++EE  RDY  NW +AVEILD+D 
Sbjct: 920  PFFNIVILHLKCLGDYILVGDLMRSMTLLNYNADITSLEEIGRDYQTNWTTAVEILDEDT 979

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            +L AE+N NL+  +++   A D+ R  +  V  YHLGE VN    GSLVM  P    G +
Sbjct: 980  FLAAESNLNLYVCKRDPSAA-DDTRQHMHEVALYHLGEMVNVIVKGSLVMAQP----GDM 1034

Query: 670  P-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
            P     + ++G+++G +GVI  +  E Y  L ++QTNL K IK VG + H  WR+F  E+
Sbjct: 1035 PLPLNKSFLYGSLHGAVGVIVPIKQELYAILNQIQTNLAKTIKSVGKIEHGFWRTFLAER 1094

Query: 725  KTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 774
            K   A  F+DGDLIE  LDL +  ++ +S+++          N++ E+L K VE+LTR+H
Sbjct: 1095 KIEPATGFIDGDLIEQLLDLPKEALESVSQSIKVDEEGGHQRNMTPEDLVKLVEDLTRIH 1154


>gi|157128866|ref|XP_001655232.1| DNA repair protein xp-e [Aedes aegypti]
 gi|108882187|gb|EAT46412.1| AAEL002407-PA [Aedes aegypti]
          Length = 980

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/654 (49%), Positives = 444/654 (67%), Gaps = 44/654 (6%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN      G+YV V+E + NL PI+D C+VDLE+QGQGQ++TCSG+YK+GSLRI+R
Sbjct: 332 QLVKLNTTAGDNGAYVTVMETFTNLAPIIDMCIVDLEKQGQGQMITCSGSYKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDD-PFDTFLVVSFISETRILAMNLEDELEETEIE 128
           NGIGI E A ++L GIKGMW+LR   DD P+D  LV+SF+  TRIL ++ E E+EETEI 
Sbjct: 392 NGIGIQEHACIDLPGIKGMWALRVGIDDSPYDNTLVLSFVGHTRILTLSGE-EVEETEIP 450

Query: 129 GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
           GF S  QT +C +  + Q++QVT  + RL+   ++ +  EWK P    ++V   N+ Q++
Sbjct: 451 GFLSDQQTFYCANVDFGQIIQVTPTTARLIQCDNKSMICEWKPPDDKRISVVACNSCQMV 510

Query: 189 LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
            AT    + Y+EIG+  L       L+YE++CLDI+P+ +N +++++ AVG+WTDIS  I
Sbjct: 511 CATAC-DIYYIEIGESKLVHKSTVTLDYEVACLDISPLEDNATHAELVAVGLWTDISACI 569

Query: 249 FSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
             LP+L ++  E LGGEIIPRS+L+  FEGI YLLCALGDG +  F+L+  T  LTD+KK
Sbjct: 570 LRLPNLEVVHTEKLGGEIIPRSILMAHFEGIVYLLCALGDGSMFYFVLDKNTNRLTDQKK 629

Query: 309 VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
           V+LGTQP  L+TF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ A+ 
Sbjct: 630 VTLGTQPTILKTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAEAYQ 689

Query: 369 DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--------- 419
           DSLA+A +  + +GTID+IQKLHIR++PLGE PRRI +QE S+TF + +++         
Sbjct: 690 DSLALATKNSVILGTIDEIQKLHIRTVPLGESPRRIAYQEASQTFGVITVRTDIQDSSGL 749

Query: 420 ----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTF 451
                                       N    +E E+H + ++D  TFE +  +     
Sbjct: 750 TPSRQSASTQTTNVTLSTNMGLLKAGASNAEFGQEVEVHNLLIIDQNTFEVLHAHQFMQT 809

Query: 452 EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV 511
           EY  S++S    +D N YY VGTA V PEE EP  GRI+++   DG L  ++EKE KG+ 
Sbjct: 810 EYAMSLISAKLGNDPNTYYIVGTALVNPEEPEPKVGRIIIYHYADGNLTQVSEKEIKGSC 869

Query: 512 YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
           YSL  FNG++LA+IN  ++LY+W   DD  ++L+ EC H  ++LALY +T+GDFI+VGDL
Sbjct: 870 YSLVEFNGRVLASINSTVRLYEWT--DD--KDLRLECSHFNNVLALYCKTKGDFILVGDL 925

Query: 572 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
           M+SI+LL YK  EG+ EE ARDY  NWM+AVEILDDD +LGA+N+ NLF   K+
Sbjct: 926 MRSITLLQYKQMEGSFEEIARDYQPNWMTAVEILDDDAFLGADNSNNLFVCLKD 979


>gi|328874742|gb|EGG23107.1| UV-damaged DNA binding protein1 [Dictyostelium fasciculatum]
          Length = 1116

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/808 (44%), Positives = 520/808 (64%), Gaps = 65/808 (8%)

Query: 10   QLIKLNLQPDAK-GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+L    D    SYV VL+ + NLGPI DFC+VD+E+QGQ Q+V CSG +K+GSLR++
Sbjct: 318  QLIRLLSDRDPNTNSYVTVLDTFANLGPIPDFCLVDIEKQGQNQIVACSGGFKEGSLRVI 377

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI EQAS++L GIK +WSL   +D     +L++SFIS T++L    ED +EETEI 
Sbjct: 378  RNGIGITEQASIDLPGIKAIWSLARGSD----RYLILSFISSTKVLEFQGED-IEETEIA 432

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            GF  Q+ TL+C +    Q++Q+++  + LV   +    + WK P   S+N+A+   +Q+L
Sbjct: 433  GFDLQSPTLYCGNVADKQILQISTSGIYLVDHETNLNYDVWK-PSSGSINLASHQGNQIL 491

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINP--IGENPSYSQIAAVGMWTDISV 246
            ++ G   L+Y EI D  + ++K  ++E+EISCLDI+   +GE    S+I  VG+WTDIS+
Sbjct: 492  ISFGKT-LIYFEIKDQKIIKLKELEMEFEISCLDISSFQVGER---SKICVVGLWTDISL 547

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            RI SLP L  + KE+LGGE+IPRSVL+ AFEGI+YLLC+LGDGHL NF+++     L +R
Sbjct: 548  RILSLPTLEQVHKENLGGEVIPRSVLMIAFEGINYLLCSLGDGHLFNFIVDTINNTLHER 607

Query: 307  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            KKVSLG QPI L  F  K T +VFA+SDRPTVIYSSN+KLLYS VNLK V  +C F+S  
Sbjct: 608  KKVSLGNQPIILSKFQLKGTVNVFASSDRPTVIYSSNRKLLYSVVNLKVVVGVCSFDSEV 667

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICHQEQSRTFAICSLK-NQSCA 424
            F D +AIA +  L+IG IDDIQ+LHI+ I L GE  RRI H E  + +A+ +++ ++S  
Sbjct: 668  FRDCIAIATDKTLSIGHIDDIQRLHIKKIDLGGEFARRIAHVEAHQCYALITIRPDESGL 727

Query: 425  EES--EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS------------------- 463
            EES  E +F+R+++ QTFE I  YPL   EYG +ILS +F                    
Sbjct: 728  EESETEQNFIRIVNQQTFETIVKYPLKENEYGWTILSTNFKETLTSNSSSTSSSTSTTST 787

Query: 464  ----------------------DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQL 501
                                  ++ + Y  VGT Y   +  E   GRILVF + D +L L
Sbjct: 788  TSTSGRRRLPTTTTTTTTSNDEEEQSEYIVVGTTYHCHDRKEC--GRILVFKMIDSRLIL 845

Query: 502  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 561
            + E   +G+++ + AFNG+LL AIN+ +  Y W   D  + +L  E  + GH  +LY+  
Sbjct: 846  LDETTVRGSIFCMIAFNGQLLVAINKSVHRYTWS-GDSSSGKLTGEEIYGGHTASLYLAG 904

Query: 562  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            RGDF++VGD+MKS++LL    ++  ++E +R     W++ +  +DDD YLG++N++NL  
Sbjct: 905  RGDFVLVGDMMKSMALLQASGKD--VKELSRSSQPFWLTGLTFIDDDTYLGSDNSYNLIL 962

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 681
            ++KN+E A + +   L+ +G  H GEF+NRF HG+L   L D D  +  ++IF T++G I
Sbjct: 963  MKKNTETANEVDSQLLDNIGHIHTGEFINRFHHGTLAT-LTDVDSPKPNSIIFATISGCI 1021

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK-KTVDAKNFLDGDLIES 740
            GVI+++  + Y F  KLQ  L +VI+G+GG +H++WRSF NE    ++++NF+DGDL+E 
Sbjct: 1022 GVISTISKQDYDFFSKLQVGLNRVIRGIGGFSHDRWRSFQNEHISNIESRNFIDGDLVEQ 1081

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVE 768
            FL L   +M E++K M++S+E+  K++E
Sbjct: 1082 FLHLRHDKMLEVTKDMDISIEDTYKKIE 1109


>gi|322787057|gb|EFZ13281.1| hypothetical protein SINV_13198 [Solenopsis invicta]
          Length = 986

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/664 (49%), Positives = 449/664 (67%), Gaps = 48/664 (7%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QLIKL  + D  GSY   +E + NL PIVD  VVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332 QLIKLITKADENGSYCVPMETFTNLAPIVDMAVVDLERQGQGQMVTCSGAFKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI E AS++L GIKGMW+L+      FD  LV+SF+ +TRIL +N E E+EET+I G
Sbjct: 392 NGIGIQEHASIDLPGIKGMWALKVGGSH-FDNTLVLSFVGQTRILTLNGE-EVEETDIPG 449

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F +  QT    +   +  +Q+T  SVRL+S  S+ + +EW+     +++V   N +QVL 
Sbjct: 450 FVADEQTFHTGNVTNDLFIQITPTSVRLISYESKMVISEWEPQNKRTISVVACNGTQVLC 509

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           ATG   L Y+EI    +       L++E++CLDI+P+  N +  +I AVG+WTDISVRI 
Sbjct: 510 ATGN-DLFYIEISCNQIVSKGFVTLQHEVACLDISPLDGNEA--KIVAVGLWTDISVRIL 566

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP+L  I KE LGGEIIPRS+L+  FEG +YLLCALGDG +  F+L+ +TG L+D+KKV
Sbjct: 567 ILPNLEEINKELLGGEIIPRSILMTCFEGNTYLLCALGDGSMYYFILHKQTGILSDKKKV 626

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV+HMC  N+ ++PD
Sbjct: 627 TLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNHMCSLNAESYPD 686

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---------- 419
           SLA+A +  +TIGTID+IQKLHIR++PLGE PRRI +QE S+TF + +++          
Sbjct: 687 SLALATDSTVTIGTIDEIQKLHIRTVPLGESPRRIAYQESSQTFGVITMRVDVQESSGVS 746

Query: 420 -----------------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                             +E E+H + ++D  TFE +  + L  
Sbjct: 747 IVRHSASTQATSTSSSSHIASHNKPSGHTASEIGQEIEVHNLLIIDQHTFEVLHAHTLMA 806

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++S    +D   Y+ VGTA++ P+E EP  GRIL++   +GK   +AEKE KG+
Sbjct: 807 TEYALSLISTRLGEDPTSYFVVGTAFINPDETEPKMGRILLYHWSEGKFTQVAEKEIKGS 866

Query: 511 VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
            YSL  FNGKLLA+IN  ++L++W       +EL+ EC H  +I+ALY++T+GDF++VGD
Sbjct: 867 CYSLVEFNGKLLASINSTVRLFEWT----AEKELRLECSHFNNIIALYLKTKGDFVLVGD 922

Query: 571 LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           LM+S++LL YK  EG+ EE ARDYN NWM+++EILDDD +LGAEN FNLF  +K+S   +
Sbjct: 923 LMRSLTLLQYKTMEGSFEEIARDYNPNWMTSIEILDDDTFLGAENCFNLFVCQKDSAATS 982

Query: 631 DEER 634
           ++ER
Sbjct: 983 EDER 986


>gi|166240328|ref|XP_637896.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
 gi|238064940|sp|B0M0P5.1|DDB1_DICDI RecName: Full=DNA damage-binding protein 1; AltName: Full=DNA repair
            protein E; AltName: Full=UV-damaged DNA-binding protein 1
 gi|165988543|gb|EAL64385.2| UV-damaged DNA binding protein1 [Dictyostelium discoideum AX4]
          Length = 1181

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/827 (43%), Positives = 527/827 (63%), Gaps = 74/827 (8%)

Query: 10   QLIKLNLQPD-AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN + D    SYV  LE + N+GP+VDFCVVD E+QGQ Q+VTCSG Y+DGSLRI+
Sbjct: 362  QLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLRII 421

Query: 69   RNGIGINEQASVELQGIKGMWSL---------------------RSSTDDPFDTFLVVSF 107
            RNGIGI EQAS+EL+GIKG++ +                      +   D  D +L+ SF
Sbjct: 422  RNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLITSF 481

Query: 108  ISETRILAMNLEDELEETEIEGFCSQTQTLFCH--DAIYNQLVQVTSGSVRLVSSTSREL 165
            I  T++L+    +E+EETE EG  S   TL+C   D + N L+Q+T+ S+ L+ S + + 
Sbjct: 482  IECTKVLSFQ-GEEIEETEFEGLESNCSTLYCGTIDKL-NLLIQITNVSINLIDSNTFKR 539

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEVKHAQLEYEISCLDI 223
             ++W   P   +N+ + N  Q++L+     L+Y +I   +  +  VK  +L +EISC+DI
Sbjct: 540  VSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELPHEISCIDI 598

Query: 224  NPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYL 282
            +P      + SQ+ +VG+W DI++RIF LP L  I KE LGGEI+PRS+L+ +F+ I Y+
Sbjct: 599  SPFDSFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGEILPRSILMISFDSIDYI 658

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
             C+LGDGHL  F  +  + +L D++K++LGTQPI L+ F  KNT ++FA SDRPTVIYS 
Sbjct: 659  FCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAISDRPTVIYSH 718

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH-P 401
            NKKL YS VNLK+V+++  FNS  FP+S+AIA    LTIGTID+IQKLHI++IPL E   
Sbjct: 719  NKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIKTIPLNEEMG 778

Query: 402  RRICHQEQSRTFAICSLKNQS---------CAEESEMHFVRLLDDQTFEFISTYPLDTFE 452
            RRI H E    +A+ ++KN           C E+ E+ ++R+ +DQTFE IS+Y LD +E
Sbjct: 779  RRIVHLEDHSCYAVITVKNNEGLLGGAQDLCEEDEEVSYIRIYNDQTFELISSYKLDPYE 838

Query: 453  YGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTK--GRILVFIV--------------- 494
             G SI  C F+ DD N Y  VGT+      N P K  GR+L+F +               
Sbjct: 839  MGWSITPCKFAGDDVNTYLAVGTSI-----NTPIKSSGRVLLFSLSSSSSSNDKDSLDNN 893

Query: 495  --------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRELQ 545
                     +GKL L+ E + + +VY L +FNG+L+AA+++++   ++   ++   + + 
Sbjct: 894  NNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFSIRYTHSKEKNCKVIS 953

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            SE  H GH + L + +RG FI+VGD+MKS+SLL+ +  +G++E+ AR+    W+ +V ++
Sbjct: 954  SESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQIARNPQPIWIRSVAMI 1012

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            +DD ++GAE + N   V+KN++   + ER  L+ VG YH+GE +N  RHGSLV RLPDSD
Sbjct: 1013 NDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGHYHIGESINSMRHGSLV-RLPDSD 1071

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
               IPT+++ +VNG IGV+AS+  E ++F  KLQ  L +V++GVGG +HE WR+F+N+  
Sbjct: 1072 QPIIPTILYASVNGSIGVVASISEEDFIFFSKLQKGLNQVVRGVGGFSHETWRAFSNDHH 1131

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            T+D+KNF+DGDLIE+FLDL      +    + ++ ++  +R+E L +
Sbjct: 1132 TIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESLMQ 1178


>gi|290998415|ref|XP_002681776.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
 gi|284095401|gb|EFC49032.1| damage-specific DNA binding protein 1 [Naegleria gruberi]
          Length = 1103

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/784 (43%), Positives = 515/784 (65%), Gaps = 30/784 (3%)

Query: 10   QLIKLN--LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            Q+I+++  L P+   SY EV + Y N+GPIVDFC VD ++QGQGQ+VTCSGA+KDGSLRI
Sbjct: 328  QVIRISDELNPETN-SYFEVFQTYSNIGPIVDFCFVDADKQGQGQIVTCSGAFKDGSLRI 386

Query: 68   VRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            ++NGIGI E  ++ +L G+  +WSL++ T +  + +LV+SF  +T I +++ E E+ E +
Sbjct: 387  IKNGIGIEELTTISDLVGLNRIWSLKTETGE--EKYLVMSFTGQTLISSVDNE-EIGEAK 443

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
            I GF   + T+ C   I N  +QVT  + RLVSS + EL +EWK P   ++++A +N +Q
Sbjct: 444  IPGFDVDSTTVLCDTVIGNNYLQVTDKTARLVSSHTLELIDEWK-PSSGTISLAASNPTQ 502

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            ++++ G G LVY+EI    L +++  +L+YE+SC+DI+P  E    S + AVGMWT+ISV
Sbjct: 503  LVVSLGEGKLVYIEISAQSLKQIQQTKLDYEVSCIDISP-EEGKISSTVCAVGMWTEISV 561

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            R+ +LP  +++T + LGGEI+PRS+L+  FEGI+YL+C LGDGHL  F ++   G LTD+
Sbjct: 562  RVLTLPSFDILTVQELGGEILPRSILMPTFEGINYLMCGLGDGHLFTFKMDRGMGILTDK 621

Query: 307  KKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            K++  G++PI LR F SK+   +VFAAS+RPT+IYS N+KL+YSNVNL EV+ MC FN  
Sbjct: 622  KRIVAGSKPIMLRPFISKDRQLNVFAASERPTIIYSRNQKLVYSNVNLGEVNDMCSFNHE 681

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE 425
            +FP  +AIA E  + IG ID+IQKLHI+++ L   P +ICHQ  ++ + +   +     E
Sbjct: 682  SFPFHIAIANENSILIGQIDEIQKLHIKTVQLHAQPTKICHQPSTKAYGLLITQ----FE 737

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 485
              E   +  LD+  FE  S   L+  E G SI+SC F+DD N Y+ VGTA    +E EP+
Sbjct: 738  NPETSAIFSLDENNFEKKSEIRLEGNELGQSIISCKFTDDDNEYFIVGTAITEGDEEEPS 797

Query: 486  KGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG-TREL 544
            KGRILV  V+D KL L AEK+ KGAV  L++FNGKLLA ++ ++ L+KW   DDG  ++L
Sbjct: 798  KGRILVLQVQDDKLVLKAEKDVKGAVMVLHSFNGKLLAGVSGRLMLFKWAESDDGDNKDL 857

Query: 545  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-----KHEEGAIEERARDYNANWM 599
              EC   G I  L + + GDFI++GD+MKS+ L +Y     +H  G +   ++DY  +W+
Sbjct: 858  VQECSCSGGIYILDIDSHGDFILIGDMMKSVHLFVYENPEEQHVSGNLRLISKDYQYSWL 917

Query: 600  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
            S   +L++  Y+  +   N+ T++KN E A++EER +L  VG+Y+  + VNR + G + M
Sbjct: 918  SCSLMLNESEYVAVDQQGNMITLKKNDEAASEEERKQLVRVGKYYCSDRVNRIQPGFIGM 977

Query: 660  RLPD--SDVGQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
            R  +  SD+   P  T +FGT++G IGV+A LP E + F+ K+Q  +  V+ G+  ++ E
Sbjct: 978  RFANSSSDINTQPVKTALFGTISGGIGVLAQLPPETFAFVTKIQKAMSSVVTGLANISRE 1037

Query: 716  QWRSFNNEKKTVDAKNFLDGDLIESFLDL----SRTRMDEISKTM--NVSVEELCKRVEE 769
             +R + +E+   D+  F+DGD +ESFL+      +  ++E+S      +++EEL K +E+
Sbjct: 1038 TYRQYRSERTREDSVGFIDGDFVESFLEFDFETQQRVIEELSNNHQEQITLEELVKNIED 1097

Query: 770  LTRL 773
            L+ L
Sbjct: 1098 LSHL 1101


>gi|1399512|gb|AAC47162.1| repE [Dictyostelium discoideum]
          Length = 1139

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/827 (43%), Positives = 527/827 (63%), Gaps = 74/827 (8%)

Query: 10   QLIKLNLQPD-AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN + D    SYV  LE + N+GP+VDFCVVD E+QGQ Q+VTCSG Y+DGSLRI+
Sbjct: 320  QLIRLNTEKDQTTDSYVTYLEAFTNIGPVVDFCVVDAEKQGQAQIVTCSGTYRDGSLRII 379

Query: 69   RNGIGINEQASVELQGIKGMWSL---------------------RSSTDDPFDTFLVVSF 107
            RNGIGI EQAS+EL+GIKG++ +                      +   D  D +L+ SF
Sbjct: 380  RNGIGIAEQASIELEGIKGIFPINNNNNNNNNNNNNNNNNNNNNSNGITDSKDRYLITSF 439

Query: 108  ISETRILAMNLEDELEETEIEGFCSQTQTLFCH--DAIYNQLVQVTSGSVRLVSSTSREL 165
            I  T++L+    +E+EETE EG  S   TL+C   D + N L+Q+T+ S+ L+ S + + 
Sbjct: 440  IECTKVLSFQ-GEEIEETEFEGLESNCSTLYCGTIDKL-NLLIQITNVSINLIDSNTFKR 497

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEVKHAQLEYEISCLDI 223
             ++W   P   +N+ + N  Q++L+     L+Y +I   +  +  VK  +L +EISC+DI
Sbjct: 498  VSQWNVEPSRRINLVSTNQDQIVLSIDKS-LLYFQINSSNKSIQLVKEIELPHEISCIDI 556

Query: 224  NPIGE-NPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYL 282
            +P      + SQ+ +VG+W DI++RIF LP L  I KE LGGEI+PRS+L+ +F+ I Y+
Sbjct: 557  SPFDSFMDTKSQLVSVGLWNDITLRIFKLPTLEEIWKEPLGGEILPRSILMISFDSIDYI 616

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
             C+LGDGHL  F  +  + +L D++K++LGTQPI L+ F  KNT ++FA SDRPTVIYS 
Sbjct: 617  FCSLGDGHLFKFQFDFSSFKLFDKRKLTLGTQPIILKKFKLKNTINIFAISDRPTVIYSH 676

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH-P 401
            NKKL YS VNLK+V+++  FNS  FP+S+AIA    LTIGTID+IQKLHI++IPL E   
Sbjct: 677  NKKLFYSVVNLKDVTNVTSFNSDGFPNSMAIATTNSLTIGTIDEIQKLHIKTIPLNEEMG 736

Query: 402  RRICHQEQSRTFAICSLKNQS---------CAEESEMHFVRLLDDQTFEFISTYPLDTFE 452
            RRI H E    +A+ ++KN           C E+ E+ ++R+ +DQTFE IS+Y LD +E
Sbjct: 737  RRIVHLEDHSCYAVITVKNNEGLLGGAQDLCEEDEEVSYIRIYNDQTFELISSYKLDPYE 796

Query: 453  YGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTK--GRILVFIV--------------- 494
             G SI  C F+ DD N Y  VGT+      N P K  GR+L+F +               
Sbjct: 797  MGWSITPCKFAGDDVNTYLAVGTSI-----NTPIKSSGRVLLFSLSSSSSSNDKDSLDNN 851

Query: 495  --------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRELQ 545
                     +GKL L+ E + + +VY L +FNG+L+AA+++++   ++   ++   + + 
Sbjct: 852  NNNNNNSGANGKLTLLEEIKFRSSVYFLLSFNGRLIAAVHKRLFSIRYTHSKEKNCKVIS 911

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            SE  H GH + L + +RG FI+VGD+MKS+SLL+ +  +G++E+ AR+    W+ +V ++
Sbjct: 912  SESVHKGHTMILKLASRGHFILVGDMMKSMSLLV-EQSDGSLEQIARNPQPIWIRSVAMI 970

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            +DD ++GAE + N   V+KN++   + ER  L+ VG YH+GE +N  RHGSLV RLPDSD
Sbjct: 971  NDDYFIGAEASNNFIVVKKNNDSTNELERELLDSVGHYHIGESINSMRHGSLV-RLPDSD 1029

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
               IPT+++ +VNG IGV+AS+  E ++F  KLQ  L +V++GVGG +HE WR+F+N+  
Sbjct: 1030 QPIIPTILYASVNGSIGVVASISEEDFIFFSKLQKGLNQVVRGVGGFSHETWRAFSNDHH 1089

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            T+D+KNF+DGDLIE+FLDL      +    + ++ ++  +R+E L +
Sbjct: 1090 TIDSKNFIDGDLIETFLDLKYESQLKAVADLGITPDDAFRRIESLMQ 1136


>gi|195996153|ref|XP_002107945.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
 gi|190588721|gb|EDV28743.1| hypothetical protein TRIADDRAFT_18324 [Trichoplax adhaerens]
          Length = 1134

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/821 (43%), Positives = 523/821 (63%), Gaps = 71/821 (8%)

Query: 10   QLIK-LNLQPDAK-GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            QLIK LN  PD++  SY++V++ + NLGPI+D   VDL++QGQ Q+VTCSG  K+ SLR+
Sbjct: 329  QLIKVLNTSPDSETDSYIDVIDNFTNLGPIIDMVSVDLDKQGQSQLVTCSGFGKNASLRV 388

Query: 68   VRNGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFLVVSFISETRILAMNLEDELEET 125
            +RNGIGI+E A+++L  I G+W LR  S +   +D  LV+SF   +R L  +   E+EET
Sbjct: 389  LRNGIGIHELANIDLDHICGIWRLRTVSRSISEYDDVLVLSFAGHSRFLKFDGR-EVEET 447

Query: 126  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 185
            +I GF    +T F  +  ++Q+VQ+++ SVRL     R L  EWK P G +++ +TA  +
Sbjct: 448  DISGFDDYKETDFAANVAFDQIVQISNESVRLAGCDGRGLLQEWKPPNGKTISKSTAGNT 507

Query: 186  QVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            Q+++A+G   L YLEIG+G L +V +  LE++I+C+DI+ + ++   +QI AVG+W D+S
Sbjct: 508  QIMVASGC-ELFYLEIGEGELKQVSNISLEHDIACIDIS-LKDDNERAQICAVGLWVDMS 565

Query: 246  VRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD 305
             R+  LP+L L+  E LGG+IIPRS++L  F+   YLL A+GDG L  +L+N  T  LT+
Sbjct: 566  ARLLLLPNLQLMLTESLGGDIIPRSIMLNRFDNEIYLLVAMGDGTLAYYLVNTTTCSLTN 625

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            RK V+LG     L TF S + ++VFA SDRPTVIY +N KL++SNVNLK+V+ M PF+S 
Sbjct: 626  RKSVNLGVVHSNLYTFKSGSISNVFACSDRPTVIYINNHKLVFSNVNLKKVNFMSPFHSE 685

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ---- 421
            +FP+SLA+  +    IGTID+IQKLHIR+ PLGE  R    QE+S++F I + + +    
Sbjct: 686  SFPNSLALVNDSGFIIGTIDEIQKLHIRTKPLGETTR----QEESQSFGIITCRTEVPSE 741

Query: 422  --------------------SCAEESE---------------MHFVRLLDDQTFEFISTY 446
                                 C E+S+               +  V ++D  + +     
Sbjct: 742  DDKNFVPTHQSASLLVSNRTMCPEQSDNSSSTFDSDTLSEKNIDSVLIIDQHSLDAQCAL 801

Query: 447  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE 506
             L   E+G S++SC+F +D   YYCVGTA+V  E+ EPTKG I +    +GK+Q +  KE
Sbjct: 802  QLQDCEWGMSLISCTFENDPEAYYCVGTAFVNLEDKEPTKGNIRILKYFEGKIQQVHSKE 861

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
              GAVY + AFNG+LLA++N  + +Y+W       +EL  E   H ++LALY++T+GDFI
Sbjct: 862  VSGAVYCMVAFNGRLLASVNSTVSVYEWT----SNKELVEETSFHNNVLALYLKTKGDFI 917

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            ++GDLM+SISL  Y+     IE   ++ + NWM+AVEI+DDD YLG EN+ NLFT +KNS
Sbjct: 918  LIGDLMRSISLCAYRPMNNEIELICKNNDPNWMTAVEIIDDDSYLGGENSHNLFTCQKNS 977

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR----LPDSDVGQIPTVIFGTVNGVIG 682
              +++EE+  L  VG YH+GEFVN FR GSLVM+    +PDS  G I   +FGTV+G +G
Sbjct: 978  -SSSEEEQKHLPTVGVYHVGEFVNVFRQGSLVMQNTVDIPDSVQGSI---LFGTVSGAVG 1033

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            V+ +L    + F+  +   L  V+KGVG + H+ WRSF+N++KT   ++F+DGDL+ESFL
Sbjct: 1034 VVVTLAPAMFEFVSAIANKLSTVVKGVGKIEHQFWRSFSNDRKTEPCQSFVDGDLVESFL 1093

Query: 743  DLSRTRMDEISKTMNVS---------VEELCKRVEELTRLH 774
            DLS   M  ++  + +          VE++ K VEEL+R+H
Sbjct: 1094 DLSPEDMQRVANGLTIQTADGTRPAMVEDVLKTVEELSRIH 1134


>gi|328770638|gb|EGF80679.1| hypothetical protein BATDEDRAFT_11194 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1098

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 323/768 (42%), Positives = 490/768 (63%), Gaps = 21/768 (2%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE 81
            G+ + + + + NL PI DFCVVD+E+QGQ Q+V CSGA +DGS+RI+RNGIG+ E   ++
Sbjct: 337  GNVLTLCKTFSNLAPISDFCVVDIEKQGQAQIVACSGAQRDGSIRIIRNGIGVEEIGQLD 396

Query: 82   -LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH 140
             ++ + G+W+L+  +    D  LV+SFI ETR+  ++ +   E   +  F +  +TL+C 
Sbjct: 397  DMEELTGVWALKPYSAARHDNVLVLSFIGETRLQKLDGDSMAEMDMLGNFKTAERTLWCQ 456

Query: 141  DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
            +   + +VQ+TS S+ +++        EW    G SV  A+   + +L++ GGG +   E
Sbjct: 457  NLSSDMVVQITSQSITILTIEGWTTVAEWCFDLGASVTHASVYQNMILVSLGGGMIHLFE 516

Query: 201  IGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 260
              D  L   +  Q++ E+SCL I  + E      + AVG W D SVR+  +PDL+ I KE
Sbjct: 517  FNDRELVMKRSIQIQVEVSCLHICKMEELNVC--LCAVGCWEDNSVRLLKIPDLSEIQKE 574

Query: 261  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             L G+ IPRS+LL  F+ + YLL +LGDG L NF +  K+ +L DRKK++L TQPITLRT
Sbjct: 575  ILPGDTIPRSILLVEFDNLPYLLVSLGDGQLFNFRIG-KSLKLADRKKITLATQPITLRT 633

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
            F S   THVFAASDRPTVI+  + +LLYSNVN++E+SH+ PFNS     +LA A +G L 
Sbjct: 634  FQSHGRTHVFAASDRPTVIFVKSGQLLYSNVNVREISHVSPFNSHMAEGALAFASDGALK 693

Query: 381  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--KNQSCAEESEMHFVRLLDDQ 438
            IGTI+ +QKLHI++I LGE PRRI + + S TF + ++  +N    + +++  +RLLD Q
Sbjct: 694  IGTIETVQKLHIKTIKLGETPRRIAYHDVSHTFGVLTVFSRNLPNGDLADISCLRLLDGQ 753

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK 498
             +E + +  L  FE   S+++  F+DD  +YY VGT +  P E+EP +GRILVF V D +
Sbjct: 754  GYEVLDSIELQPFEIASSLITIRFTDDDTLYYTVGTGFAFPHEDEPVRGRILVFKVNDMR 813

Query: 499  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
             LQL+ E + +G+ YS  + +G+L+A +N  + + +W   D    ELQS   +HGH+LAL
Sbjct: 814  LLQLVHEYDIRGSAYSFVSVHGRLVAGVNSNVMVLRWN-SDTSLLELQSM--NHGHVLAL 870

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 617
             +  RGDFI+V DL+KSI+LL +     +++E A D ++NWM+A E++DDD +LGA+++ 
Sbjct: 871  SLAVRGDFILVADLIKSITLLQFDLATDSLKELAYDADSNWMTAAELIDDDTFLGADSSM 930

Query: 618  NLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG--QIPTVIFG 675
            N+F + K  +  ++EER RL   G +H GE +NRFR GSL +   D  +    IP +++ 
Sbjct: 931  NIFALSKQGDQVSEEERQRLRPKGWFHTGELINRFRKGSLTLHATDETLALPAIPEILYC 990

Query: 676  TVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            TV+G IGV+A +P ++    L  LQ  L+ V++GVGGL H  WR +  E++++ +   +D
Sbjct: 991  TVHGAIGVVARIPSDETAKILSTLQEALKSVVQGVGGLIHSDWRRYRTERRSIKSAGIID 1050

Query: 735  GDLIESFLDLSRTRMD--------EISKTMNVSVEELCKRVEELTRLH 774
            GDLIESFL+L R+  D        +++ +  V++E L K VE+LTR+H
Sbjct: 1051 GDLIESFLELDRSMQDHVFTQVATQVAGSTPVTLETLTKMVEDLTRIH 1098


>gi|340381612|ref|XP_003389315.1| PREDICTED: DNA damage-binding protein 1-like [Amphimedon
            queenslandica]
          Length = 1142

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 339/821 (41%), Positives = 500/821 (60%), Gaps = 66/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+KL+  P   G Y++VLE   N+GPI+D  VVDL++QG+  +V CSG  KDG+LRIV+
Sbjct: 332  QLVKLSSSPLENGGYIDVLESMTNIGPILDMSVVDLDKQGRDVLVCCSGLGKDGALRIVK 391

Query: 70   NGIGINEQASVELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            +GIGINE AS++L GIKG+WSL+ +  +D  D  +V++F+ +T  L +  E E+EETE+ 
Sbjct: 392  SGIGINEAASIDLPGIKGIWSLKCAGREDELDDTVVLTFVGQTMALRLAGE-EVEETELP 450

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
               +  QT +C +   N ++Q+T+ SVRL+   + EL  +W  P G  ++ A  N+SQV+
Sbjct: 451  ALVTDQQTFYCSNVTGNAIIQITTKSVRLMDDKAMELICDWSPPDGRGISTAACNSSQVM 510

Query: 189  LATGGGHLVYLEIGDGILTE---VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +A G   L YLE+  G   E   + H  + +E++CLDINP+ E  + S + AVG+WTDIS
Sbjct: 511  VAVGC-DLYYLEVKPGSPGELLLISHTTMSHEVACLDINPLSEAGT-SSLCAVGLWTDIS 568

Query: 246  VRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD 305
            V+I ++P    +  + LGG+IIPRSVL+    G  YLLCALGDG L  + ++ +TG+L  
Sbjct: 569  VQILNVPQFEHLFTQPLGGDIIPRSVLMVELGGACYLLCALGDGCLHYYTMDSETGQLRG 628

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K+V LGT+PI L+ F S   T VFA SD PT+I+ SN+KLL+SNVN+KEV+++C  NS 
Sbjct: 629  GKRVVLGTKPIVLKQFKSDGVTSVFACSDHPTIIHFSNQKLLFSNVNVKEVNYICTLNSE 688

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------ 419
            AF +SLA+     L  G +D IQ LHI +IPLGE PR I +QE S+TF +   +      
Sbjct: 689  AFQNSLALVDSSTLIFGCVDQIQMLHIETIPLGESPRCIAYQESSQTFLVGGYRTDKSGP 748

Query: 420  ----------------NQSCA-------------EESEMHFVRLLDDQTFEFISTYPLDT 450
                            N S A              + EMH + L D  TF+    Y L  
Sbjct: 749  DNTYTPSRQSVSTRTSNVSVAVVPPQLNIEEFKCPQVEMHSLILFDQTTFDVSHVYQLCP 808

Query: 451  FEYGCSILSCSFS--DDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETK 508
             E+   + SC+ +  D+    Y VGTA V PEE E + GRILVF V  GKL+L+ EK   
Sbjct: 809  QEHILCVTSCNLTTNDEERSVYVVGTALVKPEEKESSTGRILVFAVNSGKLELLHEKLEN 868

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
            GAV+ +  FNGK+L ++N  + +   +   DG   L+ EC +  +ILALY++T+GDFI+V
Sbjct: 869  GAVFQVLGFNGKILNSVNSGVFVNALV---DGA--LKEECAYKNNILALYLKTKGDFILV 923

Query: 569  GDLMKSISLLIYKHEEGAIEERARDYNAN--WMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            GD+++S+ LL+YK E G +EE   D+N +  + +A+E++DD+ YLGA+   ++F  +KN+
Sbjct: 924  GDILRSLKLLVYKEELG-LEEIGVDHNISPCFCTAIEMIDDENYLGADGR-HIFICQKNT 981

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD---SDVGQIPTVIFGTVNGVIGV 683
            E  ++ +   +      + G+ VN F  GS VM  P    S + Q   ++FGTV+G IG+
Sbjct: 982  EATSEADLLYMVQPSRMYFGDNVNVFSRGSFVMDHPGAGASSLLQGKPILFGTVHGAIGL 1041

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            I +L  + Y  L KLQ  +   IK VG + HE +RSF+NE ++     F+DGDL+E FL+
Sbjct: 1042 IGTLNMDTYTLLSKLQQKMAANIKSVGNIEHEIYRSFSNEHRSKPFAGFIDGDLVEKFLE 1101

Query: 744  LSRTRMDEISKTM----------NVSVEELCKRVEELTRLH 774
            L R +M +I + +          +VSV+++ K +E+L+RLH
Sbjct: 1102 LPRPQMSQIVQGIKTTDVTGTEVDVSVDDILKLIEDLSRLH 1142


>gi|324502823|gb|ADY41238.1| DNA damage-binding protein 1, partial [Ascaris suum]
          Length = 1129

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 340/819 (41%), Positives = 490/819 (59%), Gaps = 72/819 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L  +P   GSY+ +++ YVNL PI D  V++ +  GQ QV+TCSGA+KDGSLRI+R
Sbjct: 329  QLVRLRSEPCPDGSYISLMDTYVNLAPIRDMVVINAD--GQQQVITCSGAFKDGSLRIIR 386

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E ASVEL G+K +++L   ++   D +LVV F+ ET IL ++ E ELE+T++ G
Sbjct: 387  NGIGIEELASVELPGVKALFTLNVESE--LDDYLVVGFVDETHILKISGE-ELEDTQLPG 443

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNE---WKSPPGYSVNVATANASQ 186
            F +  QTL+        + Q+T   V L+      LR     W+ P   SV      + Q
Sbjct: 444  FSTTEQTLWAGRVGSGGIAQITPLKVVLI------LRGNTLTWEPPSRISVVSVNELSGQ 497

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            V+LA G   L YL + D I T + + + E+EI+C+D+  +G+    S++ AV  WTD+SV
Sbjct: 498  VVLACGN-QLHYLLLTDKI-TPITNIECEFEIACIDVGCVGDEIE-SKLCAVAYWTDMSV 554

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
             + SLPDLN I +E  GGE++ RS+L+C  EGI YLL ALGDG L  + ++M +G LT  
Sbjct: 555  ALRSLPDLNEIVREKCGGEMLARSLLICMMEGIVYLLVALGDGTLYYYQIDMNSGALTQP 614

Query: 307  KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            KK +LGTQP TL+ F S+   +VFA SDRPTVIYSS++KL++SNVNLK V+HMC  NSA 
Sbjct: 615  KKATLGTQPTTLKKFMSRGARNVFACSDRPTVIYSSSQKLVFSNVNLKLVAHMCALNSAT 674

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ----- 421
            + DSL +     L IG IDDIQKLHIR++PLGE   RI +Q ++ T AI   +N+     
Sbjct: 675  YTDSLVMTDGQTLVIGRIDDIQKLHIRTVPLGESVSRIAYQPETGTIAILVQRNEFVDAD 734

Query: 422  ------SCA-------------------------EESEMHFVRLLDDQTFEFISTYPLDT 450
                   CA                         EE E+  V + D  T E + ++ L  
Sbjct: 735  GKHHCGHCASKMAVNASSSHPSVVTSATTPPIEPEEIEVSSVVVFDANTLEILHSHELGK 794

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV----EDGKLQLIAEKE 506
             E   SI SC   DD   YY VGTA VL +E E   GR+L+F V    E G+++L+ +KE
Sbjct: 795  NELAMSIKSCVLGDDPQPYYAVGTAVVLTDETESKSGRLLIFQVAPSSEGGRMRLVHDKE 854

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
             KGA YS+    GKL+ AIN  ++L++W       +EL+ EC    ++ ALY++T+ D +
Sbjct: 855  IKGAAYSIQVLMGKLVVAINSCVRLFEWT----AEKELRLECSDFDNVTALYLRTKNDVV 910

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            +VGDLM+S+S+L YK  E + E+ ARD+  NWM+A EI+D + +LGAE  FNLFTV K+ 
Sbjct: 911  LVGDLMRSLSVLAYKPMESSFEKIARDFVTNWMTACEIIDMETFLGAEIMFNLFTVVKDC 970

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 686
                +  R +L+  G Y+LGE VN F HGSL+    D        +++GT +G +GVI  
Sbjct: 971  SSKDEGIRLQLQETGMYYLGESVNAFCHGSLIATHIDLTPSFTTPILYGTSDGGLGVIVQ 1030

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
            L  + Y F+ +L+T +  V K    + H Q+R+F ++ +T  +  F+DGDL+E  LD+SR
Sbjct: 1031 LTPQFYDFVHELETRIAAVTKNCMRIEHGQYRTFESDGRTEQSVGFIDGDLVEGLLDMSR 1090

Query: 747  TRMDEISKTMNV-----------SVEELCKRVEELTRLH 774
              ++++   + +           ++EE+ K VE+L R+H
Sbjct: 1091 DSVEKLIDGLTLPAAAGQEQKVATIEEVLKVVEDLARIH 1129


>gi|41055225|ref|NP_956920.1| DNA damage-binding protein 1 [Danio rerio]
 gi|34784892|gb|AAH56837.1| Zgc:63840 [Danio rerio]
          Length = 897

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/564 (52%), Positives = 391/564 (69%), Gaps = 41/564 (7%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV V+E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 332 QLVKLNVDSNDQGSYVGVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS +    D  LV+SF+ +TR+L ++ E E+EETE++G
Sbjct: 392 NGIGIHEHASIDLPGIKGLWPLRSESSRDTDDMLVLSFVGQTRVLMLSGE-EVEETELQG 450

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
           F    QT FC +  + QL+Q+TS SVRLV+  S+ L +EWK P G +++VA+ N +QV+L
Sbjct: 451 FVDNQQTFFCGNVAHQQLIQITSVSVRLVTQDSKALVSEWKEPQGRNISVASCNNTQVVL 510

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A G   L YL+I  G L ++   ++E+E++CLDI P+GE  + S I AVG+WTDIS R+ 
Sbjct: 511 AVGR-VLYYLQILSGELKQISSTEMEHEVACLDITPLGERTADSCICAVGLWTDISARLL 569

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            LP    + KE LGGEIIPRS+L+  FEG  YLLCALGDG L  F L+++TG L++RKKV
Sbjct: 570 KLPCFTPLHKEMLGGEIIPRSILMTTFEGSHYLLCALGDGALFYFGLDIQTGVLSERKKV 629

Query: 310 SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           +LGTQP  LRTF S +T++VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  +PD
Sbjct: 630 TLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPD 689

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
           SLA+A    LTIGTID+IQKLHIR++PL E P+RIC+QE S+ F + S + +        
Sbjct: 690 SLALANNSTLTIGTIDEIQKLHIRTVPLYESPKRICYQEVSQCFGVLSSRVEMQDASGTT 749

Query: 422 -------------------------------SCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                                          S  EE E+H + ++D  TFE +  +    
Sbjct: 750 AAVRPSASTQALSSSVSSSKLLPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQ 809

Query: 451 FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            EY  S++SC    D  VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGA
Sbjct: 810 NEYALSMVSCKLGRDPAVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGA 869

Query: 511 VYSLNAFNGKLLAAINQKIQLYKW 534
           VYS+  FNGKLLA+IN  ++LY+W
Sbjct: 870 VYSMVEFNGKLLASINSTVRLYEW 893


>gi|393905247|gb|EJD73911.1| CPSF A subunit region family protein [Loa loa]
          Length = 1145

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 338/823 (41%), Positives = 496/823 (60%), Gaps = 70/823 (8%)

Query: 10   QLIKLNLQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+L+ +P A G+ Y+ +L+ Y NL PI D  V  +   GQ Q++TCSGAYKDG++RI+
Sbjct: 335  QLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRII 392

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI E ASVEL+GIK M++LR+  D  FD +L++SF S+T +L +N E ELE+T+I 
Sbjct: 393  RNGIGIEELASVELKGIKNMFTLRTR-DHEFDDYLILSFDSDTHVLLINGE-ELEDTQIT 450

Query: 129  GFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
            GF     TL+      +  ++QVT G V L+   + ++   WK+    ++        Q+
Sbjct: 451  GFVVDGATLWAGCLFQSTTILQVTHGEVILIDGDNIQI---WKASKWITLVAVNEITGQL 507

Query: 188  LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
            ++A G   L+YLE        +   + E+EISC+DI PIG     S+I AVG WTD+SV 
Sbjct: 508  VIACGA-LLIYLEADSAGFKLISELECEFEISCIDITPIGNETLRSEICAVGYWTDLSVA 566

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG L D K
Sbjct: 567  LRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPK 626

Query: 308  KVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            K +LGTQPI LR F S+ ++  ++F  SDRP VIYSSN+KLL+SNVNL+ VS M P  + 
Sbjct: 627  KATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAE 686

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI---------- 415
            A+PD+L +     L IG IDDIQKLHIR++PLGE P RI +Q ++ T A+          
Sbjct: 687  AYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVTVERLEFVDA 746

Query: 416  --------CSLKN------------------QSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                    C+ KN                  +  AEE E+  + LLD  TFE + ++ L+
Sbjct: 747  MGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILHSHELE 806

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKET 507
              E   S+ SC   +DS  Y+ VGTA ++ +E E   GRI++F   +G  +++L+ EKE 
Sbjct: 807  GSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEI 866

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
            KGA YS+ + +GKL+ A+N  ++L++W       +EL+ EC    ++ ALY++T+ D I+
Sbjct: 867  KGAAYSIQSMDGKLVVAVNSCVRLFEWT----ADKELRLECSDFDNVTALYLKTKNDLIL 922

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D D +LGAEN++NLFTV K+S 
Sbjct: 923  VGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSF 982

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
                EE  RL+ +G ++LGE VN F HGSL     D       ++++GT +G IGVI  +
Sbjct: 983  TVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQM 1042

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
            P   Y FL  +Q  L    +    ++H Q+R+F  EK++     F+DGDLIES LD+ + 
Sbjct: 1043 PPVLYTFLHDVQKRLADYTENCMRISHTQYRTFETEKRSEVPNGFIDGDLIESLLDMGKD 1102

Query: 748  RMDEI----------------SKTMNVSVEELCKRVEELTRLH 774
             + +I                ++ ++ + E++ K VE+L+R+H
Sbjct: 1103 SVGQIVNGLKMPLLNIPSSETTELVDATAEDVLKLVEDLSRIH 1145


>gi|390366809|ref|XP_780126.3| PREDICTED: DNA damage-binding protein 1-like isoform 1
           [Strongylocentrotus purpuratus]
          Length = 630

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/565 (51%), Positives = 375/565 (66%), Gaps = 59/565 (10%)

Query: 265 EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 324
           EIIPRS+LL  FEG +Y+LCALGDG L  F LN +TG +TDRKKV LGTQP  L+TF S 
Sbjct: 70  EIIPRSILLTTFEGQNYILCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSL 129

Query: 325 NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 384
           +T +VFA SDRPTVIYSSN KL++SNVNLKEVS+MCP NS  +PDSLA+  +  L IG+I
Sbjct: 130 STVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSI 189

Query: 385 DDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN----------------QSCA---- 424
           D+IQKLHIR++PLGE P RI +QE S+TF I S +                 QS +    
Sbjct: 190 DEIQKLHIRTVPLGETPLRITYQEPSQTFGIISTRTDVVDSSGTTASMGQTRQSASTSAL 249

Query: 425 -------------------------EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 459
                                    +E E+H + ++D  TFE +  +   + EY  S++S
Sbjct: 250 NITKSGGNKGMAGQAGGSGEGSSFGDEVEVHSLLVIDQHTFEVLHAHHFGSSEYATSLIS 309

Query: 460 CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 519
           C   +D N YY VG A V P+E EP  GRI+VF   DGKLQ IAEKE KGA YSL  FNG
Sbjct: 310 CKLCNDPNWYYIVGLANVHPDEAEPKSGRIVVFQYSDGKLQEIAEKEIKGAPYSLVEFNG 369

Query: 520 KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
           KLLA++N  ++L++W         L+ EC H+ ++LALY++T+GDFIVVGDLM+SI+LL 
Sbjct: 370 KLLASVNSVVRLFEWTPE----HSLRVECSHYNNVLALYLKTKGDFIVVGDLMRSITLLA 425

Query: 580 YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
           YK  EG +EE ARDY+ NWMSAVEILDDD +LGAEN+ NLFT +K+S   TDEER  L+ 
Sbjct: 426 YKPMEGCLEEIARDYSPNWMSAVEILDDDTFLGAENSSNLFTCQKDSAATTDEERRHLQE 485

Query: 640 VGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
           VG +HLGEFVN FRHGSLVM+ + +S +    +V+FGTV+G +G++  L  E Y FL ++
Sbjct: 486 VGLFHLGEFVNVFRHGSLVMQNIGESTIPTTGSVLFGTVSGSVGLVTQLNEEFYRFLLEV 545

Query: 699 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
           Q  L KVIK VG + H  WRSF +E+KT    NF+DGDL+ESFLDLSR  MDE+++ + +
Sbjct: 546 QNKLTKVIKSVGKIKHSFWRSFYSERKTEPMDNFIDGDLLESFLDLSRDTMDEVAQGLQI 605

Query: 759 S---------VEELCKRVEELTRLH 774
                       +L K VEELTR+H
Sbjct: 606 DDGGMKRDCMANDLIKIVEELTRIH 630



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 57/71 (80%)

Query: 303 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
           +TDRKKV LGTQP  L+TF S +T +VFA SDRPTVIYSSN KL++SNVNLKEVS+MCP 
Sbjct: 1   MTDRKKVILGTQPTVLKTFKSLSTVNVFACSDRPTVIYSSNHKLVFSNVNLKEVSYMCPL 60

Query: 363 NSAAFPDSLAI 373
           NS  +PD   I
Sbjct: 61  NSDGYPDRYEI 71


>gi|74208347|dbj|BAE26370.1| unnamed protein product [Mus musculus]
          Length = 599

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 286/548 (52%), Positives = 361/548 (65%), Gaps = 54/548 (9%)

Query: 277 EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 336
           E   YLLCALGDG L  F LN++TG L+DRKKV+LGTQP  LRTF S +TT+VFA SDRP
Sbjct: 56  ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP 115

Query: 337 TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 396
           TVIYSSN KL++SNVNLKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++P
Sbjct: 116 TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP 175

Query: 397 LGEHPRRICHQEQSRTFAICSLK------------------------------------- 419
           L E PR+IC+QE S+ F + S +                                     
Sbjct: 176 LYESPRKICYQEVSQCFGVLSSRIEVQDSSGGTTALRPSASTQALSSSVSSSKLFSSSTA 235

Query: 420 --NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 477
               S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V
Sbjct: 236 PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV 295

Query: 478 LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
            PEE EP +GRI VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W   
Sbjct: 296 YPEEAEPKQGRIAVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE 355

Query: 538 DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
               +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N N
Sbjct: 356 ----KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPN 411

Query: 598 WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
           WMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSL
Sbjct: 412 WMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSL 471

Query: 658 VMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
           VM+ L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  
Sbjct: 472 VMQNLGEASTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSF 531

Query: 717 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKR 766
           WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K 
Sbjct: 532 WRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKV 591

Query: 767 VEELTRLH 774
           VEELTR+H
Sbjct: 592 VEELTRIH 599


>gi|313238818|emb|CBY20011.1| unnamed protein product [Oikopleura dioica]
 gi|313245836|emb|CBY34826.1| unnamed protein product [Oikopleura dioica]
          Length = 1135

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/813 (37%), Positives = 467/813 (57%), Gaps = 59/813 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            +LI++ +  +  G +   L +Y NLGPI D C+VD E+QGQGQ+VT SG    GSLRI+R
Sbjct: 334  ELIRIEVSDNNSGQHFTSLHQYDNLGPIKDMCIVDFEKQGQGQLVTASGVGTGGSLRIIR 393

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NG+GI+E AS++L+G+KG+W+L+  +       L++SF+ +T  L +  +D  E  EI G
Sbjct: 394  NGVGIHEYASIDLEGVKGLWALKYLSSSTKQDSLLLSFVGQTIFLRLEGQDVTEVEEIPG 453

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +  QT++  +    Q +Q+T   VRL++  S  L+  W+      +N+ + N +QVLL
Sbjct: 454  FTNGEQTMYAGNVTDQQFLQITEKQVRLIADES--LKGSWEPEENTQINLCSVNKNQVLL 511

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
              G    +YLEI D  + E      + EI+C+DI+P+ +  S S    +G+W +++V + 
Sbjct: 512  GVGST-AIYLEINDCEIVEKSRHVFDSEIACVDISPLQKEMS-SDFFTIGLW-NVTVSVN 568

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
             LP + +I K  LGG IIPRSVLL +F      YLL ++GDG L    LN +    + +K
Sbjct: 569  KLPSMEVIAKMELGGNIIPRSVLLNSFGENNTPYLLVSIGDGALFYIKLN-EDHSFSSKK 627

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            ++ LGTQP +L  F + N + VFA SDRP VI+S+N+K+ +SNVNLK+V+HMC  ++  +
Sbjct: 628  RIQLGTQPTSLNKFQTSNGSTVFACSDRPAVIHSTNEKIFFSNVNLKQVNHMCVLDTEGY 687

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI------------ 415
            P++LA+  E  L IG IDDIQKLH  +I L E P  + H E+   FA             
Sbjct: 688  PNALALVNENALLIGKIDDIQKLHTSTIRLNETPHSVLHYEEREVFAYLGEFDEEDLRDT 747

Query: 416  -----------------CSLK--------NQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
                             C  K        + S    + ++ + + D+ TF     +  D 
Sbjct: 748  RPDQESTKKLFTPLSIQCPYKSGVVERDDSNSLTHYTMVNTLVICDEITFTPKWAHFFDV 807

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKG 509
             E    +           +  VGTA +  +E E   GRI VF   ++ KL L++ K+  G
Sbjct: 808  GEISSCMCIAKLGKKDEQFIVVGTA-ITADEQECKNGRICVFSYSKEEKLTLVSTKQVNG 866

Query: 510  AVYSLNAFNG-KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ-TRGDFIV 567
            AVYS+ A NG K++ AINQ++++++     +    LQSE     HI  + V  ++  FI+
Sbjct: 867  AVYSVKALNGNKIICAINQQLKVFEM----NEQTTLQSEAPIANHITCVAVDVSKNGFIL 922

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
              DLM+SIS+  YK  EGA+EE ARDY+ NWM+A++++DDD Y+GAEN+ N+F   +N+E
Sbjct: 923  SADLMRSISVFSYKPLEGALEEIARDYHPNWMTAIKMIDDDNYIGAENSENIFICTRNTE 982

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-DSDVGQIPTVIFGTVNGVIGVIAS 686
               +E+R +L   G YH+GE +N    G+LVM +  +S +    T + G+V+G +G++A 
Sbjct: 983  APDEEDRQQLLPTGYYHVGEHINTIVEGNLVMDVHVESSITPTRTFLMGSVSGYVGLLAI 1042

Query: 687  LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
             P +Q+ FL KL+  +RKVI+GVG ++HE WR F ++ +  D K F+DGDLIE F DL  
Sbjct: 1043 FPEKQWQFLSKLEAKMRKVIRGVGKIDHESWRRFESDSRMEDCKGFVDGDLIEMFQDLRP 1102

Query: 747  TRMDEISKTMNVSVE-----ELCKRVEELTRLH 774
             +  E+   + +  E     ++ + V++L RLH
Sbjct: 1103 EKQKEVISELTMDGEPATHDDVVRLVDDLCRLH 1135


>gi|18377609|gb|AAL66955.1| putative UV-damaged DNA binding factor [Arabidopsis thaliana]
          Length = 270

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/270 (92%), Positives = 264/270 (97%)

Query: 505 KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
           KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD
Sbjct: 1   KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 60

Query: 565 FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
           FIVVGDLMKSISLL+YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL TV+K
Sbjct: 61  FIVVGDLMKSISLLLYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLLTVKK 120

Query: 625 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
           NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS++GQIPTVIFGTVNGVIGVI
Sbjct: 121 NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTVNGVIGVI 180

Query: 685 ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
           ASLP EQY FLEKLQ++LRKVIKGVGGL+HEQWRSFNNEK+T +A+NFLDGDLIESFLDL
Sbjct: 181 ASLPQEQYTFLEKLQSSLRKVIKGVGGLSHEQWRSFNNEKRTAEARNFLDGDLIESFLDL 240

Query: 745 SRTRMDEISKTMNVSVEELCKRVEELTRLH 774
           SR +M++ISK+MNV VEELCKRVEELTRLH
Sbjct: 241 SRNKMEDISKSMNVQVEELCKRVEELTRLH 270


>gi|328700785|ref|XP_001945395.2| PREDICTED: DNA damage-binding protein 1-like [Acyrthosiphon pisum]
          Length = 1072

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/732 (38%), Positives = 438/732 (59%), Gaps = 69/732 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLIKL+ + +  GS++ +L++Y+NLGPIVD C+VD++++GQ Q+VTCSGAYKDGSLRI+ 
Sbjct: 352  QLIKLHYELNETGSHLTILDQYLNLGPIVDMCLVDIDQRGQEQIVTCSGAYKDGSLRIIN 411

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NG+GI E A+++L GIKG+WSL  +T    D  LV+SF+  +++LA + E E EE  +EG
Sbjct: 412  NGVGIQEIATIDLLGIKGIWSLSFNTKSDLDDTLVLSFVWHSKVLAYDSE-EAEEIYVEG 470

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F S+ QT +C   + N++VQVTS SVRL+   S++L +EWK P   ++N  + N  Q + 
Sbjct: 471  FESELQTFYCGKTLDNKMVQVTSASVRLICMESKKLISEWKVPYFRNINAVSCNGHQAVC 530

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI----NPIGENPSYSQIAAVGMWTDIS 245
            ++G   L Y+EIG   + + KH  LE+E+SCLDI    +  GE      + A+G+WTD S
Sbjct: 531  SSGHD-LYYIEIGSQKIFQNKHITLEHEVSCLDICLFKDKFGETII---LLAIGLWTDTS 586

Query: 246  VRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD 305
            +++  LPD   + KE+L   I+PRSV     E I YL CALG+G L  F LN++TG+L  
Sbjct: 587  IKVLKLPDFVELEKENLFEGIVPRSVSFVTLENIHYLFCALGNGSLCYFYLNIETGKLYK 646

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
              K+ LG +P  ++ F + ++  +F  SD P +I+SSNKKL+++NVN  +V+++C  N+ 
Sbjct: 647  NGKIKLGNRPALIKKFQTASS--IFICSDFPIIIHSSNKKLVFTNVNSIKVNNICMVNTD 704

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE 425
             +P+SL +A +  + IG ID  +K H+R+IPLGE PRRI +QE S+TF I ++K     E
Sbjct: 705  NYPNSLILATDTAIIIGVIDMEKKHHVRTIPLGESPRRIAYQEASKTFGIITIKKNIKDE 764

Query: 426  -----------------------------------------------ESEMHFVRLLDDQ 438
                                                           E E+  + +L   
Sbjct: 765  MIKGPVHPSASTRTQNITSAMGNRFLIDQHLSSSSEASSLSDSDFNPEVEISSMIILHQD 824

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED-- 496
            TFE +  Y L + EY  SI+S   ++D N YY +GTA +  E  +P +GRI+VF  +   
Sbjct: 825  TFEILHVYQLYSNEYALSIISTKLANDPNTYYVLGTALMTEECQDPKEGRIVVFHYDTSL 884

Query: 497  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 556
             KL  I+EK   G  +S+  F+  L+A +N  +QLY W       ++    C  + + L+
Sbjct: 885  SKLTQISEKIVYGGCFSMVTFHDMLIATVNSSVQLYIWT----HEKKFVLRCTQNNNSLS 940

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
             +V+T G +I+ GDLMKS++L  YK +E  +E+   D    W SA+EI+DDD+++GAEN+
Sbjct: 941  QHVKTNGKYILCGDLMKSLALFKYKTDEPNLEKIVTDDCLKWSSAIEIIDDDLFIGAEND 1000

Query: 617  FNLFTVRKNSEGAT-DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD----VGQIPT 671
              L+   K+S   + D +    + +G +HLG+ VN FRHGSLVM+  +++    +    +
Sbjct: 1001 KYLYVFYKHSNFVSGDYQHNNFKEIGRFHLGDLVNVFRHGSLVMKQFENEYETQLSVQGS 1060

Query: 672  VIFGTVNGVIGV 683
            +++GT++G +G+
Sbjct: 1061 ILYGTISGALGL 1072


>gi|384500266|gb|EIE90757.1| hypothetical protein RO3G_15468 [Rhizopus delemar RA 99-880]
          Length = 1057

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 303/783 (38%), Positives = 459/783 (58%), Gaps = 48/783 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL+ +          ++++E + NLGPI DFCV D  + GQ QV+TCSGA K+GSLRI+R
Sbjct: 304  QLVYIQRTTGESEDILQIIETFANLGPITDFCVAD--KGGQTQVITCSGAGKEGSLRIIR 361

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NG+G+NE A + + G+KG+W+L       +D  L++SF+ +TR+L   L+ +    +++ 
Sbjct: 362  NGVGLNELAMIPISGVKGIWALGE-----YD-LLLMSFVHQTRLL--QLQKDHTIVQLDT 413

Query: 130  FCS---QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
            F +     +TL     +   ++QVT  SVRL+ + S  L + W S     + VA+ N +Q
Sbjct: 414  FSAIDLNARTLVAGCVVDGMIIQVTDHSVRLMDTMS--LLDVWSS--DELITVASVNPTQ 469

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW-TDIS 245
             +++ G G LV L++ +  L  +   +L +EISC+DI+PIG   + S   A+G W ++ +
Sbjct: 470  CVISLGFGKLVALQVLNRKLNVIGETRLSFEISCIDIHPIGSR-TESAFVALGTWNSNTN 528

Query: 246  VRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD 305
            V + SL DL  I ++ LGG ++PRS+L+  FE   YLL ALGDG   NF L+  +G+L+D
Sbjct: 529  VCLLSLSDLQPIAQKSLGGTVVPRSILISQFENTVYLLVALGDGQFYNFKLDSISGQLSD 588

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            +K+  LG  PI L  FS    THVFAASD+P+V++S N+KL+YSNVNLKEV     F   
Sbjct: 589  KKRTFLGKLPIHLSNFSLNGVTHVFAASDKPSVVHSRNQKLVYSNVNLKEVRCATSFGCH 648

Query: 366  AFPDSLA-IAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS--LKNQS 422
            AFPD++A I KEG L IG +++IQKLHI  IP  + PRRI +QE +++F I +  + +  
Sbjct: 649  AFPDAVALITKEG-LIIGQMEEIQKLHITKIPTIDTPRRIVYQESTKSFGIITERMISDR 707

Query: 423  CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 482
                +      +LDDQ+F  +       FE   S+ S  F DD N YY V +     +EN
Sbjct: 708  YRPSTVTGGFEVLDDQSFTVLDRIYFKEFERPLSVTSVLFEDDPNEYYIVASG----KEN 763

Query: 483  EPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM---LRD 538
            +   GRILV  +  D KL+LI++ +T G +  +    GKLLA+I   + LY+W    L  
Sbjct: 764  DGL-GRILVLQLASDRKLRLISQLKTGGMIDCVRPIEGKLLASIQGTLYLYRWQSQRLVK 822

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
              +R L S        +   + T  +FI+ GDL  S+ +  Y  +   + E A       
Sbjct: 823  VSSRRLPS--------VTRCMTTHENFIMTGDLAYSVVMFQYDRQSDQLLEVAAHEKTKE 874

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
            + A++ +D ++ +GAE   +LF +    +  + +E   L+V+  +HLG+ V+RFR GSL 
Sbjct: 875  VLAMKAIDSNLVIGAEREGHLFVLEHCQDEVSADE-PLLDVISTWHLGDVVSRFRFGSLG 933

Query: 659  MRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
            M   D D   I P++IF T +G IGVIA L  E+Y  L ++Q N+ +V+KG+G L+H  W
Sbjct: 934  MNNVDPDSSPIAPSLIFATASGAIGVIADLSPERYKLLYQMQCNMCRVVKGIGELSHTDW 993

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELT 771
            R+ N   +  +A NF+DGDLIESFLDLS  +M  +       + ++++VE+LCK VEEL 
Sbjct: 994  RNVNIMYRKEEAMNFIDGDLIESFLDLSSQQMQNVVDGLHGGRKLDLTVEDLCKVVEELM 1053

Query: 772  RLH 774
             +H
Sbjct: 1054 SIH 1056


>gi|170589357|ref|XP_001899440.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158593653|gb|EDP32248.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 655

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/658 (40%), Positives = 387/658 (58%), Gaps = 71/658 (10%)

Query: 183 NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
           N  Q+++A G   L+YLE        +   + E+EISC+DI PIG+    S+I AVG WT
Sbjct: 3   NLGQLVVACGA-LLIYLEANSAGFKVITEIECEFEISCIDITPIGKGTLRSEICAVGYWT 61

Query: 243 DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE 302
           D+SV + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG 
Sbjct: 62  DLSVALRALPQLVEVVREKIVGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGA 121

Query: 303 LTDRKKVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
           L D KK +LGTQPI LR F S+ +   ++F  SDRP VIYSSN+KLL+SNVNL+ VS M 
Sbjct: 122 LLDPKKATLGTQPIHLRKFRSRCSPVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMT 181

Query: 361 PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI----- 415
           P  + A+PD+L +     L IG IDDIQKLHIR++PLGE P RI +Q ++ T A+     
Sbjct: 182 PLYAEAYPDALVLTDGHSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVIVERL 241

Query: 416 ----------------------CSLKN------------------QSCAEESEMHFVRLL 435
                                 C+ KN                  +  AEE E+  V LL
Sbjct: 242 EVILFLFFYVFVDAMGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSVLLL 301

Query: 436 DDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 495
           D  TFE + ++ L+  E   S+ SC   DDS  Y+ VGTA ++ +E E   GRI++F   
Sbjct: 302 DSNTFEILHSHELEGSEMAMSLASCQLGDDSQPYFVVGTAVIMSDETESKMGRIMMFQAS 361

Query: 496 DG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
           +G  +++L+ EKE KGA YS+ + +GKL+ A+N  ++L++W       +EL+ EC    +
Sbjct: 362 EGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEW----TADKELRLECSDFDN 417

Query: 554 ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
           + ALY++T+ D I+VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D D +LGA
Sbjct: 418 VTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDSDNFLGA 477

Query: 614 ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
           EN++NLFTV K+S     EE  RL+ +G ++LGE VN F HGSL     D       +++
Sbjct: 478 ENSYNLFTVMKDSFTVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSIL 537

Query: 674 FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
           +GT +G IGVI  +P   Y FL+ +Q  L +  +    ++H Q+R+F  EK++     F+
Sbjct: 538 YGTSDGGIGVIVQMPPVLYTFLQDVQKRLAEYAENCMRISHTQYRTFETEKRSEAPNGFI 597

Query: 734 DGDLIESFLDLSRTRMDEI-----------------SKTMNVSVEELCKRVEELTRLH 774
           DGDLIES LD+ +  ++++                 ++ ++   E++ K VE+L+R+H
Sbjct: 598 DGDLIESLLDMGKDSVEQVVNGLKMPLLNSISSSETTELVDALAEDVLKLVEDLSRIH 655


>gi|312076590|ref|XP_003140929.1| CPSF A subunit region family protein [Loa loa]
          Length = 655

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/652 (40%), Positives = 381/652 (58%), Gaps = 69/652 (10%)

Query: 188 LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
           L+   G  L+YLE        +   + E+EISC+DI PIG     S+I AVG WTD+SV 
Sbjct: 8   LVIACGALLIYLEADSAGFKLISELECEFEISCIDITPIGNETLRSEICAVGYWTDLSVA 67

Query: 248 IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
           + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG L D K
Sbjct: 68  LRTLPQLMEVVREKIPGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPK 127

Query: 308 KVSLGTQPITLRTFSSKNTT--HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
           K +LGTQPI LR F S+ ++  ++F  SDRP VIYSSN+KLL+SNVNL+ VS M P  + 
Sbjct: 128 KATLGTQPIHLRKFRSRCSSVHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAE 187

Query: 366 AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI---------- 415
           A+PD+L +     L IG IDDIQKLHIR++PLGE P RI +Q ++ T A+          
Sbjct: 188 AYPDALVLTDGNSLVIGRIDDIQKLHIRTVPLGESPSRIAYQPETNTIAVTVERLEFVDA 247

Query: 416 --------CSLKN------------------QSCAEESEMHFVRLLDDQTFEFISTYPLD 449
                   C+ KN                  +  AEE E+  + LLD  TFE + ++ L+
Sbjct: 248 MGKHHFGQCASKNAMETSSSRLSSMRREPTPECLAEEMEVSSILLLDSNTFEILHSHELE 307

Query: 450 TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKET 507
             E   S+ SC   +DS  Y+ VGTA ++ +E E   GRI++F   +G  +++L+ EKE 
Sbjct: 308 GSEMAMSLASCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEI 367

Query: 508 KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
           KGA YS+ + +GKL+ A+N  ++L++W       +EL+ EC    ++ ALY++T+ D I+
Sbjct: 368 KGAAYSIQSMDGKLVVAVNSCVRLFEWT----ADKELRLECSDFDNVTALYLKTKNDLIL 423

Query: 568 VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
           VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D D +LGAEN++NLFTV K+S 
Sbjct: 424 VGDLMRSLSLLSYKSVESTFEKVARDFMTNWMSACEIIDSDSFLGAENSYNLFTVVKDSF 483

Query: 628 GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
               EE  RL+ +G ++LGE VN F HGSL     D       ++++GT +G IGVI  +
Sbjct: 484 TVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPLYHSSILYGTSDGGIGVIVQM 543

Query: 688 PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
           P   Y FL  +Q  L    +    ++H Q+R+F  EK++     F+DGDLIES LD+ + 
Sbjct: 544 PPVLYTFLHDVQKRLADYTENCMRISHTQYRTFETEKRSEVPNGFIDGDLIESLLDMGKD 603

Query: 748 RMDEI-------------------------SKTMNVSVEELCKRVEELTRLH 774
            + +I                         ++ ++ + E++ K VE+L+R+H
Sbjct: 604 SVGQIVNGLKMPLLNIIRVITLLPVPSSETTELVDATAEDVLKLVEDLSRIH 655


>gi|17541566|ref|NP_502299.1| Protein DDB-1 [Caenorhabditis elegans]
 gi|74965443|sp|Q21554.2|DDB1_CAEEL RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|5824558|emb|CAA92824.2| Protein DDB-1 [Caenorhabditis elegans]
          Length = 1134

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/818 (34%), Positives = 451/818 (55%), Gaps = 65/818 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L  +P+  GSY  +LE Y N+GPI D  +V  E  GQ Q+VTC+GA KDGSLR++R
Sbjct: 329  QLIRLMTEPNG-GSYSVILETYSNIGPIRDMVMV--ESDGQPQLVTCTGADKDGSLRVIR 385

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI+E ASV+L G+ G++ +R   D   D +++VS   ET +L +  E ELE+ ++  
Sbjct: 386  NGIGIDELASVDLAGVVGIFPIR--LDSNADNYVIVSLSDETHVLQITGE-ELEDVKLLE 442

Query: 130  FCSQTQTLFCHDAIYNQ----LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 185
              +   T+F            ++Q T   +RL+SS+   L   W+   G  ++  + NA+
Sbjct: 443  INTDLPTIFASTLFGPNDSGIILQATEKQIRLMSSSG--LSKFWEPTNGEIISKVSVNAA 500

Query: 186  QVLLATGGGHLVYL------EIGDGILTEVKHAQLEYEISCLDINPIGENPS-YSQIAAV 238
               +       VYL      E+G   +      + E EI+CLD++  G++P+  +    +
Sbjct: 501  NGQIVLAARDTVYLLTCIVDEMGALDIQLTAEKKFENEIACLDLSNEGDDPNNKATFLVL 560

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 298
              W+  ++ +  LPDL  +    L  +IIPRS++    E + YLL A GDG L+ ++ ++
Sbjct: 561  AFWSTFAMEVIQLPDLITVCHTDLPTKIIPRSIIATCIEEVHYLLVAFGDGALVYYVFDI 620

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
            KTG   + KK ++GT+P +L    +KN  H+F  SDRP +I+S++KKL++SNVN+K V  
Sbjct: 621  KTGTHGEPKKSNVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSASKKLVFSNVNVKLVDT 680

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
            +C  +S+A+ D L I+    +  GT+DDIQK+H+RSIP+GE   RI +Q+ + T+ +CS 
Sbjct: 681  VCSLSSSAYRDCLVISDGNSMVFGTVDDIQKIHVRSIPMGESVLRIAYQKSTSTYGVCSN 740

Query: 419  KNQSCAEE---SEMHFVR--------------------------LLDDQTFEFISTYPLD 449
            + +S AE    S+   V                           +LD  TF+ + ++   
Sbjct: 741  RTESKAERVFASKNALVTSQSRPKVASTRADMDESPPNTTSSFMVLDQNTFQVLHSHEFG 800

Query: 450  TFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAEKE 506
             +E   S +S  F++DS+ YY VGT  + P+E E   GRI+VF V+D    KL+ + E  
Sbjct: 801  PWETALSCISGQFTNDSSTYYVVGTGLIYPDETETKIGRIVVFEVDDVERSKLRRVHELV 860

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
             +G+  ++   NGKL+AAIN  I+L++W       +EL+ EC    H++AL ++   + +
Sbjct: 861  VRGSPLAIRILNGKLVAAINSSIRLFEWTT----DKELRLECSSFNHVIALDLKVMNEEV 916

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KN 625
             V D+M+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + NLFTV    
Sbjct: 917  AVADVMRSVSLLSYRMLEGNFEEVAKDWNSQWMVTCEFITAESILGGEAHLNLFTVEVDK 976

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +   TD+ R  LE  G ++LGE        +LV++  DS +     ++FGT  G IG+I 
Sbjct: 977  TRPITDDGRYVLEPTGYWYLGELPKVMTRSTLVIQPEDSIIQYSQPIMFGTNQGTIGMIV 1036

Query: 686  SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
             +  +   FL  ++  +   +K    + H  +R+F  +K+      F+DGDL+ES LD+ 
Sbjct: 1037 QIDDKWKKFLIAIEKAIADSVKNCMHIEHSSYRTFVFQKRAEPPSGFVDGDLVESILDMD 1096

Query: 746  RT-RMDEISKTMNVSVE--------ELCKRVEELTRLH 774
            R+  MD +SK  +   +        E+ K +E+L R+H
Sbjct: 1097 RSVAMDILSKVSDKGWDPSLPRDPVEILKVIEDLARMH 1134


>gi|219125301|ref|XP_002182922.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
            1055/1]
 gi|217405716|gb|EEC45658.1| damage-specific DNA binding protein 1 [Phaeodactylum tricornutum CCAP
            1055/1]
          Length = 1284

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 309/865 (35%), Positives = 456/865 (52%), Gaps = 124/865 (14%)

Query: 10   QLIKLNLQP-----------DAKGSYVEVLERYVNLGPIVDFCVVD-------------L 45
            QLI+++ +P            A+ SY+ V+E Y +LGPI+DF +V              +
Sbjct: 375  QLIQIHDEPIVDVEDEEDMVGAESSYLSVVEEYTHLGPILDFDLVPTAPGGGGLGQTEGI 434

Query: 46   ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVV 105
                Q QVVT SG+ K GSLR++RNGIG+NE A+VE+ GI+ +WSLR S  D  DT+LV 
Sbjct: 435  HGPSQSQVVTASGSSKSGSLRLIRNGIGMNESAAVEIPGIQNVWSLRRSFADVDDTYLVQ 494

Query: 106  SFISETRILAMNLEDELEETEIEG---------------FCSQTQTLFCHD--AIYNQLV 148
            SF+ ETR+L +   D++ + E EG                 S   TL+  +  A  N L+
Sbjct: 495  SFVHETRVLGVTTMDDMSQDEKEGDVAPGGTLEEVFLIGLKSSCATLYVGNVQAHQNGLL 554

Query: 149  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN-ASQVLLATGGGHLVYLEIGDGILT 207
            Q+T G VR   +T   + + W  P G ++ V TAN A Q+ +A  GG ++YL+I +G + 
Sbjct: 555  QITEGEVRF--ATMEAVLDTWLVPSGAAITVGTANEAGQIAVALNGGKVLYLKIEEGKIR 612

Query: 208  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 267
            E    Q+E E+SCL++NP       S   AVG+W D +VR+F    L LIT +   G   
Sbjct: 613  ECSGQQMEREVSCLNLNPFAATSHTSSFLAVGLWDDFTVRLF----LCLITLDFSSGTSG 668

Query: 268  PRSVLLCAFEG----ISYLLCALGDGHLLNFLLNMKTGEL--TDRKKVSLGTQPITLRTF 321
              +    +       ++ L   LGDG L++F +  +   +    +K+V LGTQ I L   
Sbjct: 669  NTTSTSTSLSSTGSGVNMLFVGLGDGTLISFAVVERGASIFVQSKKEVCLGTQRIDLVPL 728

Query: 322  -SSKNTTHVFAASDRPTVIYSS----------NKKLLYSNVNLKE--------------- 355
             + +  T V A  DRPTVIY +          N KL YSNVNL                 
Sbjct: 729  CTEQGGTCVLATGDRPTVIYLAGVGGISANQFNPKLCYSNVNLSAGDDEEEDDVSRPPSQ 788

Query: 356  ----VSHMCPFNSAAFPDS---------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 402
                V+   PF+S+   DS         L +A +  L +G IDDIQKLH+ +  LG  P 
Sbjct: 789  QSIVVNVATPFSSSLLFDSATGGSQRYSLCVADDSFLRMGIIDDIQKLHVTTCRLGMAPC 848

Query: 403  RICHQEQSRTFAICSLKN-----QSCAEESEM-HFVRLLDDQTFEFISTYPLDTFEYGCS 456
            RI H    R FA+  +++         +E+ M + +R +DD  F+ I    L+ FE   S
Sbjct: 849  RIVHCADGRLFAVGCIESGIKQFSLGGDEANMGNCIRFMDDANFDDIHRVDLEPFEMILS 908

Query: 457  ILSCSFSDDSN----------VYYCVGTAYVLPEENEPTKGRILVFIVEDGK-------- 498
            ++  +    S+           +  VGTAY +P+E+EP++GRILV+  +  +        
Sbjct: 909  MVYATLRIPSDGDQSDQPVHRPFLLVGTAYAMPDEDEPSRGRILVYSCQADEASGTPTST 968

Query: 499  --LQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQ-SECGHHGHI 554
              ++ I E  T+G VYS+  F +G  L  +N K  + + ++ D G   L+    GHHGHI
Sbjct: 969  RAVRQITEMSTQGGVYSICQFYDGNFLCTVNSKTHVVQ-IVADCGVLRLEYVGIGHHGHI 1027

Query: 555  LALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
            ++L+V++R     +VGDLM+S+SL+ Y  +   +EE ARD+N NW +AVE+L DD+Y+GA
Sbjct: 1028 VSLFVKSRAKPLAIVGDLMRSVSLMQYYPQHETLEEVARDFNPNWTTAVEMLTDDVYIGA 1087

Query: 614  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL-PDSDVGQIPTV 672
            EN  NLF +R+N    ++E R RL+ +GE+HLGE  N+F  GSLVM +  +S        
Sbjct: 1088 ENWNNLFCLRRNKAATSEEIRCRLDNIGEFHLGEMCNKFMSGSLVMPVSSNSTTSSRRAT 1147

Query: 673  IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +FGTV G +GVI  L      F   L+  + K I+ VGG +H+ +RS   E +   A  F
Sbjct: 1148 LFGTVEGSLGVILGLDGRTAAFFITLERAIAKTIQPVGGFSHQLYRSCQAELRVHPAHGF 1207

Query: 733  LDGDLIESFLDLSRTRMDEISKTMN 757
            +DGDL+E+FLDL R  M+ +   MN
Sbjct: 1208 VDGDLVETFLDLDRRTMEAVVAEMN 1232


>gi|223994993|ref|XP_002287180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976296|gb|EED94623.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1517

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 336/959 (35%), Positives = 472/959 (49%), Gaps = 221/959 (23%)

Query: 17   QPDAKGSYVEVLERYVNLGPIVDFCV---VDLERQGQGQ---------------VVTCSG 58
             P  + +Y+ +L+ Y NLGPIVDF +    D    G G                VVTCSG
Sbjct: 505  NPLEETTYLRLLDEYTNLGPIVDFDLRPCSDATSGGHGNAKNDSKSRDQHRQSLVVTCSG 564

Query: 59   AYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN- 117
              KDG++R+VRNG+G+ E A VE+ GIKGMWSLR +  D  D+FLV SF+ ETRIL +  
Sbjct: 565  VGKDGTVRLVRNGVGMREHAEVEMPGIKGMWSLRRTFADEDDSFLVQSFVRETRILGVQS 624

Query: 118  ---------------LEDELEETEIEGFCSQTQTLFCHDAIYNQ---LVQVTSGSVRLVS 159
                               L E  I GF S   TLF  + +      L+QV   SVRLV+
Sbjct: 625  GGEAEMEEEDDEDQEEGGALAEVTIPGFSSSKSTLFAGNLLVGSSDLLLQVVEDSVRLVN 684

Query: 160  STSRELRNEWKS------------PPGYSVNVATANAS-QVLLATGGGHLVYLEI-GDGI 205
            S + EL  EW              P G+ + VA+AN+S Q+++A  GG LVYL + GD  
Sbjct: 685  SETLELVTEWSPFSNDNEGSDDDEPLGF-ITVASANSSGQIVVALRGGTLVYLVVEGDAS 743

Query: 206  --LTEVKHAQLEYEISCLDINP-----IGENP------SYSQIAAVGMWTDISVRIFSLP 252
              +  +K   L+ EISC+D+NP     +G N        +S++ AVG+W D SVR+  L 
Sbjct: 744  PSIRRLKRVTLDREISCIDLNPFDDTAVGGNTMDVDGGHHSKLVAVGLWDDFSVRLLDLS 803

Query: 253  D----------LNL-ITKEHLGGE---------------IIPRSVLLC------------ 274
                       +NL +  ++ GG+               ++ RS+ L             
Sbjct: 804  SSHSVLDQVLQINLGVGNDNGGGKSAEEDDDELGESSQHMMARSLCLVTLDSHSSNSSSL 863

Query: 275  ------AFEG---ISYLLCALGDGHLLNFLL-----NMKTGELTDRKKVSLGTQPITLRT 320
                  +F G   +  LL  LGDG L++F +     + K   +  RK+VSLGTQ I L  
Sbjct: 864  INKKSDSFTGSNKVDMLLVGLGDGKLISFAVVHSAASSKKWFVHSRKEVSLGTQGIHLIP 923

Query: 321  FSS-KNTTHVFAASDRPTVIY--------SSNKKLLYSNVNL------KEVSHMCPFNSA 365
             SS  N T V A  DRPTV+Y        +SN KL YS ++L       E  H    N +
Sbjct: 924  MSSGSNGTCVLATGDRPTVVYLTGGNGGGNSNPKLCYSTISLTVEDDDDEDGHASHRNVS 983

Query: 366  A--------------------FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
                                    SL +A E  L +G IDDIQKLH+ S  LG  PRRI 
Sbjct: 984  VNVASSFRSSLLFSSSNSTSNHNYSLCVADETTLRLGMIDDIQKLHVTSYKLGMTPRRIA 1043

Query: 406  HQEQSRTFAICSL--------KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 457
            + E  R + +  +         NQ  AE +  + VR  DD TFE I+   L+ FE   S+
Sbjct: 1044 YHEAGRVYCVGCIDGNAKGGNNNQVGAEINMGNCVRFFDDSTFEEINQIDLEPFETILSL 1103

Query: 458  LSCSFSDDSNV---------------YYCVGTAYVLPEENEPTKGRILVFIVEDGK---- 498
            +S S    S                 Y  +GTAY  P+E+EPT+GRILV     G+    
Sbjct: 1104 VSVSLCTSSQTLTQSNSKQDTSEYKPYILIGTAYAYPDEDEPTQGRILVVECNSGEAEPH 1163

Query: 499  --------------LQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTRE 543
                          ++ + +  T+G VYS++ F  G +LA +N K  L +  +  D   E
Sbjct: 1164 LKSDDDMEDTYSRYVRHVTQMPTRGGVYSISPFYGGTVLATVNSKTHLCRLSIGCDQIGE 1223

Query: 544  LQ-SECGHHGHILALYVQTRG----------------DFIVVGDLMKSISLLIYKHEEGA 586
            L+    GHHGH+L+L+V++                     +VGDLM+SISL+ Y+ +   
Sbjct: 1224 LKFVGAGHHGHMLSLFVKSLAGSESESESSGTNRQAKQLAIVGDLMRSISLVEYQPKHNV 1283

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
            IEE ARDYNAN+ +AVE+L +  YLG+E   NLF +R N+  +++E R RL+ VGEYHLG
Sbjct: 1284 IEELARDYNANFCTAVEMLTNGTYLGSEGFNNLFVLRHNANASSEEARVRLDTVGEYHLG 1343

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPT--------VIFGTVNGVIGVIASLPHEQYLFLEKL 698
            E  N+F  GSL+M  P +  G +           +FGTV+G IG +  L    + FL  L
Sbjct: 1344 EMTNKFMGGSLIM--PSNSGGIMGAQNAYVGSQTLFGTVDGSIGSVLGLDGPTFAFLACL 1401

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
            Q  +  ++K VG ++HE++R+F  E++   ++ F+DGDLIE+FLDL+R  M+ I K MN
Sbjct: 1402 QRAILSIVKTVGDISHEEYRAFRAERQVRPSRGFIDGDLIETFLDLNRPTMERIVKYMN 1460


>gi|268536658|ref|XP_002633464.1| C. briggsae CBR-DDB-1 protein [Caenorhabditis briggsae]
          Length = 1134

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 292/820 (35%), Positives = 444/820 (54%), Gaps = 69/820 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L   P+  GSY  VLE Y N GPI D  +V  E  GQ Q+VTCSGA KDGSLR++R
Sbjct: 329  QLIRLMTAPNG-GSYSVVLETYTNTGPIRDMVLV--ESDGQPQLVTCSGADKDGSLRVIR 385

Query: 70   NGIGINEQASVELQGIKGMWS--LRSSTDDPFDTFLVVSFISETRILAMN---LED-ELE 123
            NGIGI E ASV+L  + GM+   LRS+TD+    F++VS   ET +L +    LED +L 
Sbjct: 386  NGIGIEELASVDLAKVIGMFPIRLRSTTDN----FVIVSLPDETHVLKITGEELEDVQLL 441

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E E E       +LF  D     ++QVT   +R +S   +     W+   G SV+  + N
Sbjct: 442  EIETERTTMYASSLFGPDD-SELILQVTEEEIRFMSFQKQV--KIWRPTNGESVSKVSVN 498

Query: 184  ASQVLLATGGGHLVYL------EIGDGILTEVKHAQLEYEISCLDINPIGEN-PSYSQIA 236
            A    +       VY       E G   +  V   + E EI+CLDI+  G++        
Sbjct: 499  AIHGQIVVAARDTVYYLKCMVDEAGALDIQIVAERKFEAEIACLDISNEGDDYKKPGTFM 558

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLL 296
             + +W   S+ +  L DL    + +L  +I+PRS++    E + YLL A GDG L+ ++ 
Sbjct: 559  VLALWGSFSMEVVQLSDLKTACQTNLPSKIVPRSIVATCIEDVHYLLVAFGDGALIYYVF 618

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 356
            ++KTG   + KK S+GT+P +L    +KN  H+F  SDRP +I+S+NKKL++SNVN+K V
Sbjct: 619  DIKTGTHGEAKKSSVGTRPPSLHRVRNKNRQHLFVCSDRPVIIFSANKKLVFSNVNVKVV 678

Query: 357  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAIC 416
            + +C  +S ++ D L I+    +  GT+DDIQK+HIRSIP+GE   RI +Q+ + T+ +C
Sbjct: 679  NTVCSLSSTSYRDCLVISDGNSMVFGTVDDIQKIHIRSIPMGESVMRIAYQKSTGTYGVC 738

Query: 417  SLKNQSCAE------------ESEMHFVR-----------------LLDDQTFEFISTYP 447
            S ++++  E            +S    V                  +LD  TF+ +  + 
Sbjct: 739  SSRSETKPERVYASKNALANSQSRAKIVATRNEVNDGPPASTSSFMILDQNTFQVLHAHE 798

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAE 504
               FE   S +S  FSDD+  YY VGT  + P+E++   GRI+VF V+D    KL+ + E
Sbjct: 799  FGPFEAAVSCISGQFSDDARQYYIVGTGLIYPDESDTKLGRIIVFEVDDVERTKLRRVHE 858

Query: 505  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
               +G+  +L   NGKL+AAIN  ++L++W       + L+ EC +  HI+AL ++   +
Sbjct: 859  LVVRGSPLALRILNGKLVAAINSSVRLFEWT----ADKVLRLECSNFNHIVALDLKVMNE 914

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR- 623
             + V DLM+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + N+FTV  
Sbjct: 915  EVAVADLMRSVSLLSYRMMEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTVEV 974

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 683
              S   TD+ R  LE  G ++LGE        SLV++  DS +     ++FGT  G IG+
Sbjct: 975  DKSRPITDDGRYVLEPTGYWYLGELPKVMVRASLVVQPEDSTIEYSHPIMFGTNQGTIGM 1034

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            +  +  +   FL  ++  +   +K    + H  +RSF  +K+      F+DGDL+ES LD
Sbjct: 1035 LVQIDDKWKKFLVSIEKAISDSVKNCMQIEHSTYRSFIFQKRIEPPSGFIDGDLVESILD 1094

Query: 744  LSRTRMDEISKTM-----NVSVE----ELCKRVEELTRLH 774
            + R+   +I K +     + S+     E+ K +E+L R+H
Sbjct: 1095 MDRSVAIDILKKVSDKGWDASLPRDPVEMLKVIEDLARMH 1134


>gi|341884150|gb|EGT40085.1| CBN-DDB-1 protein [Caenorhabditis brenneri]
          Length = 1134

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 285/820 (34%), Positives = 442/820 (53%), Gaps = 69/820 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L L      SY+ VL+ Y N+GPI D  +V  E  GQ Q+VTCSGA KDGSLR++R
Sbjct: 329  QLIRL-LSEKTNSSYISVLDTYYNIGPIRDMIMV--ESDGQPQLVTCSGAEKDGSLRVIR 385

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            NGIGI E A+V+L G+ G++ +R   D   D +++VS + ET +L +  E ELE+ +   
Sbjct: 386  NGIGIEELATVDLPGVVGIFPIR--LDSSADNYVIVSLVEETHVLQITGE-ELEDVQFLQ 442

Query: 130  FCSQTQTLFCHDAI----YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA- 184
              +   T+F            +VQVT   VRL+S+    L   W+   G  ++    NA 
Sbjct: 443  IDTALPTMFAGTLFGPNDSGLVVQVTERQVRLMSNGG--LSKFWEPANGEMISKVAVNAV 500

Query: 185  -SQVLLATGGGHLVYL-----EIGDGILTEVKHAQLEYEISCLDINPIGENPSY-SQIAA 237
              QV +A    H+ +L     E+G   ++ +   Q E EI+CLDI+  G++    +    
Sbjct: 501  SGQVCVA-ARDHVYFLSCIVDEMGALDISVIAEKQFEDEIACLDISNEGDDADKPATFMV 559

Query: 238  VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 297
            +  W   S+ +  LPDL  + +  L   I+PRS++    E + YLL A GDG L  ++ +
Sbjct: 560  LAFWRTFSMEVVQLPDLKTVCQTDLPSRIVPRSIIATCIEDVHYLLVAFGDGALTYYVFD 619

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 357
            +KTG   + KK S+GT+P +L    +KN  H+F  SDRP +I+SS+KKL++SNVN+K V+
Sbjct: 620  IKTGTHGEPKKSSVGTRPPSLHRVRNKNRQHLFVCSDRPMIIFSSSKKLVFSNVNVKVVN 679

Query: 358  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS 417
             +C  +S  + D L I+    +  GT+DDIQK+H+R+IP+GE   R+ HQ+ S T+ +CS
Sbjct: 680  TVCSMSSRVYRDCLVISDGNCMVFGTVDDIQKVHVRTIPMGESVLRVAHQKSSGTYGVCS 739

Query: 418  LKNQSCAE------------------------------ESEMHFVRLLDDQTFEFISTYP 447
             +  +  E                              +S   F+ +LD  TF+ + ++ 
Sbjct: 740  SRTDTRFERITASKSAIGKSLSKPKVTATRNDMNETPPKSTSSFI-VLDHNTFQVLHSHT 798

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAE 504
                E   S++S  F+DD+N YY VGTA V P+E+E   GRI+VF V++    KL+ + E
Sbjct: 799  FGPHETAVSVISGQFNDDNNSYYIVGTALVYPDESETKIGRIIVFEVDETDKTKLRFMTE 858

Query: 505  KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
               +GA   +   NGKL+AAIN  +++++W       +EL+ EC    HI A+ ++   +
Sbjct: 859  IVVRGAPMGIRILNGKLVAAINSSVRMFEWT----AEKELRVECSTFNHIAAVDLKVLNE 914

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR- 623
             I V D+M+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + N+FTV  
Sbjct: 915  EIAVADVMRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTVEV 974

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 683
              S   TD+ R  LE  G ++LGE         LV +  D+ +     +++GT  G +G+
Sbjct: 975  DKSRPVTDDGRYVLEPTGYWYLGELTKVMIRAVLVPQPDDNSIRYTQPIMYGTNQGSLGL 1034

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            +  +      FL  ++  +    K    + H  +RSF   K+      F+DGDLIES LD
Sbjct: 1035 VVQIDDMYKKFLLSIEKAISDAEKNCMQIEHSTYRSFTYNKRIEPPSGFIDGDLIESILD 1094

Query: 744  LSRTRMDEI-----SKTMNVSVE----ELCKRVEELTRLH 774
            + R+R  EI     +K  + S+     E+ K +++L+R H
Sbjct: 1095 MDRSRAIEILEKANTKGWDPSIPKDPVEILKIIDDLSRTH 1134


>gi|308477185|ref|XP_003100807.1| CRE-DDB-1 protein [Caenorhabditis remanei]
 gi|308264619|gb|EFP08572.1| CRE-DDB-1 protein [Caenorhabditis remanei]
          Length = 1154

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 294/843 (34%), Positives = 451/843 (53%), Gaps = 95/843 (11%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI+L   P   GSY  VLE Y N+GPI D  +V  E  GQ Q+VTCSGA KDGSLR++R
Sbjct: 329  QLIRLMPTPSG-GSYSVVLETYSNIGPIRDMIMV--ESDGQAQLVTCSGAEKDGSLRVIR 385

Query: 70   NGIGINEQASVELQGIKGMWSLR--SSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
            NGIGI E ASVEL G+ G++ +R  S+TD+    +++VS   ET +L +N E ELE+ ++
Sbjct: 386  NGIGIEELASVELAGVIGIFPIRLNSTTDN----YVIVSLAEETHVLQINGE-ELEDVQL 440

Query: 128  EGFCSQTQTLFCHDAIYNQ-----LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
               C++  T+F    I+       L+QVT   VR ++ +   L   W+ P G  ++  + 
Sbjct: 441  LQICTEMPTIFA-STIFGPDNSEVLLQVTEKHVRFMAFSG--LSKIWEPPNGELISKVSV 497

Query: 183  NASQVLLATGGGHLVYL------EIGDGILTEVKHAQLEYEISCLDINPIGENPSY-SQI 235
            NA    +       VY       E+G   +  V   + E EI+CLDI+  G++ +     
Sbjct: 498  NAIHGQIVVAARDTVYFLLCVIEEMGGLDINLVAERKFEDEIACLDISNEGDDHTKPGTF 557

Query: 236  AAVGMWTDISVRIFSLPDLNLITKE------------------HLGGEIIPRSVLLCAFE 277
              + +W+   + +  LPDL  ++ E                  +L  +I+PRS++    E
Sbjct: 558  MVLALWSTFCMEVVQLPDLKTVSCERRSLLETVLSYLSQVCQTNLPSKIVPRSIVATCIE 617

Query: 278  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 337
             + YLL A GDG L+ ++ ++KTG   + KK S+GT+P TL    +KN  H+F  SDRP 
Sbjct: 618  EVHYLLIAFGDGALVYYVFDIKTGTHGEAKKSSVGTRPPTLYRVRNKNRQHLFVCSDRPV 677

Query: 338  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 397
            +I+SS+KKL++SNVN+K V+ +C  +S+++ D L I+    +  GT+DDIQK+H+RSIP+
Sbjct: 678  IIFSSSKKLVFSNVNVKVVNTVCSLSSSSYCDCLVISDGISMVFGTVDDIQKIHVRSIPM 737

Query: 398  GEHPRRICHQEQSRTFAICSLKNQSCAE------------------------------ES 427
            GE   RI +Q  S T+ +CS + +S  E                              +S
Sbjct: 738  GESVLRIAYQRSSGTYGVCSSRTESKRERIYASKNAIYTSNSRPKITSTRNEANDNPPKS 797

Query: 428  EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC---SFSDDSNVYYCVGTAYVLPEENEP 484
               F+ +LD  TF+   ++  +       I SC    F++DS VYY VGT  + PEE + 
Sbjct: 798  TSSFM-VLDQNTFQRSGSFS-NNIRKTYMIFSCISGQFTNDSKVYYIVGTGLIYPEETDT 855

Query: 485  TKGRILVF---IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
              GRI+VF    VE  KL+ + +   +G+  +L   NGKL+AAIN  ++L++W +     
Sbjct: 856  KFGRIVVFEVDEVERSKLRRVHDLVCRGSPLALRILNGKLVAAINSSVRLFEWTM----D 911

Query: 542  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            +EL+ EC +  HI+AL ++   + + V D+M+S+SLL Y+  EG  EE A+D+N+ WM  
Sbjct: 912  KELRLECSNFNHIMALDLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSEWMVT 971

Query: 602  VEILDDDIYLGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 660
             E +  +  LG E + NLFTV    S   TD+ R  LE  G Y+LGE        SLV +
Sbjct: 972  CEFITAEQILGGEAHLNLFTVEVDKSRPITDDGRYVLEPTGYYYLGELPRVMVRSSLVAQ 1031

Query: 661  LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
              D  +     ++FGT  G IG++  +  +   FL  ++  +   +K    + H  +RSF
Sbjct: 1032 PDDCSIQYSQPIMFGTNQGSIGMVVQIDDKWKKFLIAVEKAIADSVKNCMHIEHTTYRSF 1091

Query: 721  NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI-----SKTMNVSVE----ELCKRVEELT 771
              +K+      F+DGDL+ES LD+ R+    I      K  + S+     E+ K +E+L 
Sbjct: 1092 IFQKRLESPTGFIDGDLVESILDMDRSAAIAILYKVSDKGWDASLPRDPIEILKVIEDLA 1151

Query: 772  RLH 774
            R+H
Sbjct: 1152 RMH 1154


>gi|297815870|ref|XP_002875818.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321656|gb|EFH52077.1| hypothetical protein ARALYDRAFT_323319 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 987

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 279/755 (36%), Positives = 423/755 (56%), Gaps = 66/755 (8%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
           ++VL  Y N GP++DF + + +  G  ++V C G ++D SL  V  G+GI+ +   E+  
Sbjct: 294 LQVLTTYTNSGPVIDFSLCN-KPIGVRKLVMCCGTHEDSSLEGVSTGVGISVKFFAEIPN 352

Query: 85  IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED--ELEETEIEGFCSQTQTLFCHDA 142
           I+ +WSL+SS+ +    FLV+  I+    L   ++D        + GF   + T+ CHDA
Sbjct: 353 IQRIWSLKSSSLNDNHPFLVLQPIAVAPALVFTIDDTGAFMSHTMVGFAYDSVTICCHDA 412

Query: 143 IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
                +QVT  SVRL+ S +  LR+EW +     +  A+A   QVLLAT    LVYL+I 
Sbjct: 413 ADRLFIQVTEKSVRLIDSKTGVLRSEWLASS--KILFASATIKQVLLATLDKQLVYLDIR 470

Query: 203 DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
           +GIL + K  Q  Y++SCLDI P+G N +YS++AAVG+W + S+ +  LP+L ++T EH+
Sbjct: 471 NGILVQAK-VQKGYDVSCLDIGPVGSNTTYSKLAAVGLW-EKSILVLKLPELEVLTVEHV 528

Query: 263 GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 322
              + PR +LLCAFE +SYLLCAL DG LL F LN   G+L ++    L   P TLRTF 
Sbjct: 529 HAHV-PRCILLCAFEQVSYLLCALADGSLLTFKLNEDDGQLQEKNTKELEGYPKTLRTFI 587

Query: 323 SKNTTHV-FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
           S  +    F+ S  PT+I++  +KL Y+ +NL ++  MCPF  A   + LAI  +  + I
Sbjct: 588 SNGSVRACFSTSKVPTLIFTMKQKLQYNRLNLTDIEDMCPFQRADISEGLAIVTKDGVVI 647

Query: 382 GTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE 441
            T+ D++  +I+ IP+  + RR+CHQE+S+T+A+         E+   H ++LLD +   
Sbjct: 648 CTMGDMET-NIK-IPMFSYGRRLCHQEESQTYAVL------VEEKDGRHSLQLLDKELNT 699

Query: 442 FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQ 500
             S + L+  E+G SI+SCSF+ D   YYCVGT+  VL EEN  T+GRILVF+V DG+L 
Sbjct: 700 LFS-FELNEHEHGLSIVSCSFAGDDQAYYCVGTSVNVLDEEN--TQGRILVFLVRDGELN 756

Query: 501 LIAEKETKGAVYSLNAFNGKLLAAIN-QKIQLYKWMLRDDGTRELQSECGHHGHILALYV 559
           +I +  T GAVY L   NG LL  ++   I  ++WML DD  REL               
Sbjct: 757 IIFQYPTNGAVYYLKPLNGGLLVTVSVHTIHYFEWMLHDDA-RELH-------------- 801

Query: 560 QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 619
                         SI+  +   E+G  E+R    ++    +        Y  A+  +++
Sbjct: 802 --------------SINPEVVGIEDGGWEQRFAVTSSRIQKS--------YFYADGLYSI 839

Query: 620 FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                +++G  D   G    VG+++LG+ +   + G+L  RL D D   +P+V+F TV+G
Sbjct: 840 ----HSADGVND--HGYPNTVGQWYLGQSITHMKAGTL-SRLSDEDSAIVPSVMFSTVSG 892

Query: 680 VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            +G+I SLP   Y FL KL+  +R+ I+G+G  N +  R     +   ++  FLDGD IE
Sbjct: 893 AVGMIVSLPPVIYEFLHKLEQYMREQIRGIGCPNEDFPRMCVELQSLSESTEFLDGDFIE 952

Query: 740 SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
           SF  L     +E+++ M V+VE++ K VE L  LH
Sbjct: 953 SFQILDIDDQEEVAEEMEVTVEDIRKIVEYLKLLH 987


>gi|224587439|gb|ACN58665.1| DNA damage-binding protein 1 [Salmo salar]
          Length = 444

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/446 (49%), Positives = 284/446 (63%), Gaps = 54/446 (12%)

Query: 379 LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------------------- 419
           LTIGTID+IQKLHIR++PL E PRRIC+QE S+ F + S +                   
Sbjct: 3   LTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSAST 62

Query: 420 --------------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILS 459
                                 S  EE E+H + ++D  TFE +  +     EY  S++S
Sbjct: 63  QALSSSVSSSKLFPSSTSPHETSFGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVS 122

Query: 460 CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNG 519
           C    D +VY+ VGTA V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNG
Sbjct: 123 CRLGRDLSVYFIVGTAMVYPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMMEFNG 182

Query: 520 KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
           KLLA+IN  ++LY+W       +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL 
Sbjct: 183 KLLASINSTVRLYEWT----AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLA 238

Query: 580 YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
           YK  EG  EE ARD+N NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ 
Sbjct: 239 YKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQE 298

Query: 640 VGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
           VG +HLGEFVN F HGSLV++ L +S      +V+FGTVNG+IG++ SL    Y  L  L
Sbjct: 299 VGVFHLGEFVNVFSHGSLVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDL 358

Query: 699 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
           Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLDL R +M E+  T+ +
Sbjct: 359 QNRLNKVIKSVGKIEHSFWRSFHTERKTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQI 418

Query: 759 ----------SVEELCKRVEELTRLH 774
                     +V+E+ K VEELTR+H
Sbjct: 419 DDGSGMKREATVDEVIKIVEELTRIH 444


>gi|339235331|ref|XP_003379220.1| DNA damage-binding protein 1 [Trichinella spiralis]
 gi|316978142|gb|EFV61158.1| DNA damage-binding protein 1 [Trichinella spiralis]
          Length = 1329

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/843 (30%), Positives = 441/843 (52%), Gaps = 87/843 (10%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            +L++LN       ++ EV E + NL PIVD  +VD+ +QGQG++++CSG  KDGSL+++R
Sbjct: 496  KLLRLNSLAICDETWTEV-ESFPNLAPIVDMVLVDMAKQGQGEIISCSGYGKDGSLKVIR 554

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            +GIG+ E A +++  +  +W+LR  T++P+D   ++  +  + ++    E++ E+  ++G
Sbjct: 555  SGIGLYELARLDIPFVNRVWALRYITNEPYDNLFILGVVGNSTMVIKFQENQAEQISVDG 614

Query: 130  FCSQTQTLF---CHDAIYN-QLVQVTSGSVRLVSST--SRELRNEWKSPPGYSVNVATAN 183
              +  QT     CH A     +VQV    ++L  ++   R+L +EWK P G  V++A   
Sbjct: 615  LETAEQTFVAANCHMADGALAIVQVVRSKIQLADASLDGRKL-DEWKFPDGSEVSLAACE 673

Query: 184  ASQVLLATGGGHLV-YLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
             +   L     H++ Y  + D  L  V    +E E SC++   + +      +  VG WT
Sbjct: 674  GTSGRLLVACRHILHYFNVRDDRLQLVTTRTMENEASCVEFGCLSDEGV--GVCIVGHWT 731

Query: 243  DISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE 302
             I +++  +P L  +   +L    + RS L+C FE   YL  +L DG+L+ + ++  +  
Sbjct: 732  KICLQLLFVPSLEPVQTVYLEDSSVIRSALMCKFESNMYLFVSLADGNLIFYSIDENSFA 791

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            L D KKVSLGT  I+L+ F +KNT  + A +++PTVIY +N KL +S+++   + +M P 
Sbjct: 792  LIDGKKVSLGTDSISLKMFKTKNTLSILACTEKPTVIYMNNNKLQFSSLDSSAIYYMTPL 851

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK--- 419
             ++A+ + +       LTIG +D+I+KLHIRS+ LGE PRRI  Q +++   + +++   
Sbjct: 852  FTSAYDNGVLFTNGQCLTIGVVDEIKKLHIRSVVLGETPRRIVWQPENKLVGVLTIRIMD 911

Query: 420  ------------NQSCAEES-----------------------------------EMHFV 432
                        N++    S                                   E H  
Sbjct: 912  LPGNSSSESSASNRALHSASAPPLRRTTLTVDPNSAINEGAVNIGAEDTGVDRSIETHSF 971

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF 492
             LLD  +F+ +  Y ++  E   SILSC+  +D N ++ +  A +  +E EP +GR+L+ 
Sbjct: 972  LLLDQNSFDVLHAYSMNPLEECTSILSCTMGEDQNPFFILSAAVITADETEPLQGRLLML 1031

Query: 493  IVE-DGK----LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
              E DG+    L L+ EKE  G VY++ +F  KLL A+N  + L++W   D    +L S 
Sbjct: 1032 RYERDGQGNSSLNLVHEKEVNGCVYAMASFKSKLLVAMNSSVLLFEW--SDVTGLQLVSS 1089

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
            C     + A++++ R + I+VGD+ +SI++L Y   E +  E ARDY+ NW+SA+E++D+
Sbjct: 1090 CSL--FVTAMHLKVRDEVILVGDIQRSIAVLRYVPSESSFVEEARDYHPNWISAIEVIDN 1147

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM--RLPDSD 665
            D ++ AEN+ N+   +K+ +     E   ++  G  HLGE++N F+HG+L M      S 
Sbjct: 1148 DYFMAAENSLNITVSQKDLQQQPVSESQVVKSAGRLHLGEYINVFKHGALSMYSYAGISS 1207

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK-GVGGLNHEQWRSFNNEK 724
            +   P +I GT  G I +   +    +  L  LQ     ++   VG + ++ +R +   +
Sbjct: 1208 LVSNPIMI-GTAEGSILIYCQIHDSHFRVLNDLQRCFSDIVPDNVGCIAYDSYRRYVVYE 1266

Query: 725  KTVDAKNFLDGDLIESFLDLSRTRMDEI------------SKTMNV-SVEELCKRVEELT 771
            K   A  F+DGDLIE  L++ R     +             +  N+ + +++   +EEL+
Sbjct: 1267 KNAPAFGFIDGDLIEQLLEMPRQEAIRLINGWIAAGRISPERCSNITTAQQIIDLIEELS 1326

Query: 772  RLH 774
            R+H
Sbjct: 1327 RIH 1329


>gi|430814207|emb|CCJ28534.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 904

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/736 (33%), Positives = 405/736 (55%), Gaps = 50/736 (6%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQ-VVTCSGAYKDGSLRIVRNGIGINEQASVE-LQG 84
           VL+ + N+ PI DFC V   R+G+ + +VTCSGAYKDGSLRI+R  + +N+   +  L G
Sbjct: 168 VLQSFPNISPISDFCFV--TREGRNEFIVTCSGAYKDGSLRILRYNVEMNKTLEISNLNG 225

Query: 85  IKGMWSLRSSTDDPFDTFLVVSFISETRILAM--NLEDELEETEIEGFC---SQTQTLFC 139
           I G+W L    +  + T LV+SF++ETRIL +  N+ +E E  E + F    ++  TL  
Sbjct: 226 IYGIWGLYLQNEFEY-TALVLSFVNETRILKVFHNILNEPEIEEWDNFAIPNAKLPTLVA 284

Query: 140 HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL 199
            +   N    +++ S+ L+   S  +  EW       +  A  +     ++   G +V  
Sbjct: 285 KNVNNNLFCFISNKSICLIDWKSNLVLKEWIPTADDIITCACLDTEFASVSLTKGKIVVF 344

Query: 200 EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 259
            + +  + E+   +  YE+SC+DI       S + + +VG+W   S+ I S+P + L+  
Sbjct: 345 SLKNMTIVEIGEYKFNYEVSCIDI-------SNNALISVGLWIVPSIHILSIPSMELLLS 397

Query: 260 EHLGGEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
             L G ++PRS+ + +   ++   +L  +GDG LL++ L+           +  GT PI 
Sbjct: 398 HSLLGTVVPRSICIVSLASMNKPVILVGMGDGTLLSYGLD----------GLDKGTLPIN 447

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L  F +    +VFA SDR  +IY S+ KL +S++NLKE++ M  F S+ F  ++ +  E 
Sbjct: 448 LSKFITPIGMNVFAISDRSIIIYGSSGKLSFSSINLKEINCMSSFISSIFSSTIVVVSEN 507

Query: 378 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK---NQSCAEESEMHFVRL 434
            + IG+ID +Q+L I++IPLGE PRRIC+ ++ + F + ++K     S   E +  ++++
Sbjct: 508 IIKIGSIDSLQQLQIQTIPLGELPRRICYHDKQKVFGVLTIKLSLEASNGNEVQTSYLKI 567

Query: 435 LDDQTFEFISTYPLDTFEY---GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV 491
           LD  +F+ I    LD+F+     C     S + D+   + VGT + LPEE E +KGRI++
Sbjct: 568 LDVTSFDGI----LDSFQLELNECVQCITSVTIDNQDIFVVGTGFSLPEEEESSKGRIIL 623

Query: 492 FIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH 551
           F V + K+ + +E +   AVY +   + K++A IN  + +Y +   D   +       + 
Sbjct: 624 FGVTNKKIWVFSEIQVNDAVYCIGIIDNKIIAGINALVHIYAY---DSSLKNFNVIATYR 680

Query: 552 GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA--IEERARDYNANWMSAVEILDDDI 609
              L L +   G  +++GDLMKS+SLL + + E    ++E A+D N  WM+ V  LD+D+
Sbjct: 681 STTLCLSLAVHGTHVIIGDLMKSVSLLAFINTENGPRLKEVAKDCNPLWMTCVAALDNDL 740

Query: 610 YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
           Y+GAE   NL    K+    T  E  +L+++ E   GE VN+ + G++   L   +   I
Sbjct: 741 YIGAEAEGNLSLFWKDFN--TTFEENKLQIISEIKWGELVNQIKPGTI---LYSENSIII 795

Query: 670 PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-NNEKKTVD 728
           P   F TV+G IG+I ++  E   FL  LQ+N+ K+I G+G LNH  WR+F N  KK+ +
Sbjct: 796 PKATFVTVDGSIGIIFTVKREYLEFLVNLQSNMGKIISGIGCLNHSNWRAFCNRRKKSNE 855

Query: 729 AKNFLDGDLIESFLDL 744
            K F+DGD +E F++L
Sbjct: 856 PKCFIDGDFVEIFINL 871


>gi|194377326|dbj|BAG57611.1| unnamed protein product [Homo sapiens]
          Length = 451

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 247/364 (67%), Gaps = 15/364 (4%)

Query: 422 SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 481
           S  EE E+H + ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE
Sbjct: 92  SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE 151

Query: 482 NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
            EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       
Sbjct: 152 AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE---- 207

Query: 542 RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
           +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSA
Sbjct: 208 KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 267

Query: 602 VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR- 660
           VEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ 
Sbjct: 268 VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQN 327

Query: 661 LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
           L ++      +V+FGTVNG+IG++ SL    Y  L  +Q  L KVIK VG + H  WRSF
Sbjct: 328 LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSF 387

Query: 721 NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN----------VSVEELCKRVEEL 770
           + E+KT  A  F+DGDLIESFLD+SR +M E+   +            + ++L K VEEL
Sbjct: 388 HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEEL 447

Query: 771 TRLH 774
           TR+H
Sbjct: 448 TRIH 451


>gi|358338734|dbj|GAA31211.2| DNA damage-binding protein 1, partial [Clonorchis sinensis]
          Length = 1515

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 241/729 (33%), Positives = 387/729 (53%), Gaps = 111/729 (15%)

Query: 10   QLIKLNLQPDA-KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN  PD  + SY+ VLE Y N+GPIVD  +V LE +GQ Q++TCSGAYK+G+LRI+
Sbjct: 336  QLIRLNPDPDPERNSYITVLENYTNIGPIVD--MVLLESKGQNQLITCSGAYKEGTLRII 393

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI+E A+++   IKG W     +D  +D  +VVS + +T++L +  +D++    +E
Sbjct: 394  RNGIGIHEHATIDQDLIKGAWCFPLESDR-YDDSIVVSMVGQTQLLRLT-DDDITALHLE 451

Query: 129  GFCSQTQTLFCH-----DAI----------------YNQLVQVTSGSVRLVSS---TSRE 164
            GF +  QT++C      DA                 ++ L+Q T+  +RL+         
Sbjct: 452  GFKTDEQTVYCATLSPMDACTSDNPESSSRSYSVFQHSLLMQATTSGIRLIGIHHLNGSG 511

Query: 165  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCL 221
               EW+SP G  ++  +++ + +++A+G    V   +G        +  H  +  E++C+
Sbjct: 512  CLAEWRSPSGRGISCLSSHGALIVVASGPELYVLRVVGPANQPSFEQTAHRTMSNEVACI 571

Query: 222  DINP---------------IGENPSYS--QIAAVGMWTDISVRIFSLPDLNLITKEHL-- 262
            D+ P               I E   Y+  Q+ AVG+W    + +  LP+L L+ +E L  
Sbjct: 572  DLTPFDHKRAAYAASQTSTIDEPVDYTVPQLVAVGLWLGYGLALLRLPNLELVHEEPLPE 631

Query: 263  -----GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDRKKVSLGTQP 315
                 G  ++PRSVLL   E ++YL  A+GDG L  + +        L D K+V+ GT P
Sbjct: 632  TTASTGTALLPRSVLLAQLEDMAYLFAAMGDGTLYFYTVCPSADGIVLRDAKRVNAGTGP 691

Query: 316  -ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             + L+ + S+   +VF  S+ P VIYS   KL+++N+N+KEV+ M P N A + D +A+ 
Sbjct: 692  SMFLKQWRSQCKVNVFVCSNHPCVIYSIKNKLIFANLNMKEVNFMAPLNGAFYRDCIALV 751

Query: 375  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR- 433
                L IG++D+IQKLH+R++PL E P+R+  Q+++ +  + + + +   E S    VR 
Sbjct: 752  TPTALVIGSVDEIQKLHVRTVPLEETPKRLALQDETGSLGVITYRQEVFQEGSGFKPVRS 811

Query: 434  ---------------------------------------LLDDQTFEFI---STYPLDTF 451
                                                   + +  T E +   S Y   T 
Sbjct: 812  SISLSQKVPKSTSRLPKTAPSSVSATERKFREVEVSSLLIFNKSTMELMFAHSFYFSQTL 871

Query: 452  -EYGCSILSCSFSDDS-NVYYCVGTAYVLPEENEPTKGRILVF--IVEDGKLQLIAEKET 507
             E   SI S   +D S ++ Y VGTA+++ EE EP+KGRI +F    E  +L+ +   + 
Sbjct: 872  VEVAVSIASIEPTDGSKSMLYAVGTAFLVEEEVEPSKGRIHLFHWDPETARLETVLVHDV 931

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
             GAVY L  FNG+LLAAIN  ++L+   +++D    L+  C  + +I+AL+++ +GDF++
Sbjct: 932  NGAVYRLLDFNGRLLAAINSSVRLFD--IKEDS---LRLACSFNENIIALFLRRKGDFVL 986

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGDLM+S++LL+Y+      E   R  N  W + +EILDD+ +L AE   +LF V ++S 
Sbjct: 987  VGDLMRSLTLLLYRPNVNNFEAIGRHRNPRWTTCIEILDDEHFLAAEVENSLFVVSRDSP 1046

Query: 628  GATDEERGR 636
              T E   R
Sbjct: 1047 ENTQEPTVR 1055



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 633  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHE 690
            E  RL      H G+F+N F  G+LVM+  +     I  P+ ++GTV+G IG+I  +   
Sbjct: 1149 EVQRLADCAYIHTGDFINVFVRGNLVMQNNEERWQAIGHPSHLYGTVSGSIGLIIQVSPV 1208

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
             + FL+++++ L K++  VGG  H+ WR+F  E+    A NF+DGDLIE+ LDLS     
Sbjct: 1209 LFAFLKEIESRLAKLVNPVGGFAHDMWRAFKAERIVRMAHNFVDGDLIETLLDLSSEDRA 1268

Query: 751  EISKTMNVSV 760
            ++ K + + V
Sbjct: 1269 KLVKGLRIPV 1278


>gi|449019082|dbj|BAM82484.1| UV-damaged DNA binding protein [Cyanidioschyzon merolae strain 10D]
          Length = 1372

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 281/877 (32%), Positives = 418/877 (47%), Gaps = 147/877 (16%)

Query: 24   YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            + +V++ Y N+GPI D  V   +    G ++TCSG  + GSLRI+RNGIG  E A+VEL 
Sbjct: 517  FGQVVQCYTNIGPIQDLLVTGDDSFSDGHIITCSGVSRMGSLRIIRNGIGFVEHAAVELD 576

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            GIK +++L S T   +D FLVVSF +ETR+L +   DEL   E+E       T+      
Sbjct: 577  GIKALFTLPSLTSPEWDEFLVVSFTAETRVLRLAAHDEL--VEVESLAVDEATILAMRLP 634

Query: 144  YNQL-VQVTSGSVRLVSSTSRELRN-EWKSPPGYSVNVATANASQ--VLLATGGGHLVYL 199
              QL + VT+  V LV  T  E     W  P    +  A  +     VL++T    L  L
Sbjct: 635  AEQLALWVTASYVGLVDLTLLERPAVAWTPPSSEQITNAVFDELHKLVLVSTSNAQLYVL 694

Query: 200  EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP------- 252
            +     L  V    L  E++C+       + +Y  I A+G W +  +R+F L        
Sbjct: 695  QQRKTSLVPVGSQTLPAEVACI-------HAAYG-IVALGTWAESRIRLFRLHEDTGNRW 746

Query: 253  DLNLITKEHLGGEIIPRSVLLCAFE----------GISY--LLCALGDGHLLNFLLNM-- 298
            +L  I +  L    +PRSVLL   +          G ++  LL A+GDG L  F ++   
Sbjct: 747  ELECIRESALPSTSVPRSVLLTYLDDHGGLMADHGGRAHLCLLVAVGDGRLFAFNVSQPD 806

Query: 299  --KTG-----------ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK 345
              ++G           +L   +++ LG++P  L         +VFAA  R +VI++ +  
Sbjct: 807  AKRSGPEPEDLSKCELQLQHPRQLRLGSRPAALNNLQLHGMRYVFAACGRASVIHAHHGT 866

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            L   NVNL++V+    F++  FPDS+A+A E  L +G I+ IQ+LHIR   L E PRRI 
Sbjct: 867  LFCGNVNLRDVTRAVRFHTKGFPDSIAVATEQGLALGGIEHIQQLHIRRHDLREQPRRIA 926

Query: 406  HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD 465
            H    R + IC L   S     E H VRLL+D+T E I+++ L   E+G S+++    D 
Sbjct: 927  HL---RGY-IC-LLTVSIVFGEERHHVRLLNDETLETITSHDLAMNEHGLSLVAIPERD- 980

Query: 466  SNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK----- 520
                + VGTAYVLP E EP++GRILVF     +L L+ E  T GAVY+++A         
Sbjct: 981  ---VFVVGTAYVLPSEMEPSRGRILVF--SREELLLLNELYTPGAVYTMSALADPSDRTC 1035

Query: 521  ---------LLAAINQKIQLYKWMLRDDGTR-ELQSECGHHGHILALYVQTRGDFIVVGD 570
                     L A +N  + LY W     G   EL+    H GH+L L ++ RGD ++VGD
Sbjct: 1036 RFPASAARFLAAGVNNVVILYDWGQSGHGDDYELREVARHLGHVLVLRLEARGDQLLVGD 1095

Query: 571  LMKSISLLIYKHEEG--------AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            LMKS+ +L     EG         ++  A DY   W++A   L++D YL A+N++NL ++
Sbjct: 1096 LMKSLCVLQLVLPEGETSDGASPCLKAVAWDYETAWITACAFLNEDTYLAADNSYNLLSL 1155

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS------------------ 664
            ++N      E R  L   G +HLG+ VN FR G LV     +                  
Sbjct: 1156 QRNPHETRSEFRHALNRAGAFHLGDLVNVFRRGKLVTEASGNEEAGTGNGHSTIDTESTR 1215

Query: 665  DVGQIP------------TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK----- 707
            DV +              T++F T  G IG+I  L   Q+  L +++  LR +       
Sbjct: 1216 DVARASTGTTTADNVSRQTLLFATTAGAIGIIVPLDPAQHRMLSRVEKALRSLTDHPAEA 1275

Query: 708  --------------------GVGGLNHEQWRSFNNEKK----------TVDAKNFLDGDL 737
                                GV G  H  WR+  +E+            +  + F+DGDL
Sbjct: 1276 GAADNGHERVRRSPLTSIRLGVEGFAHADWRTPLSERALNSLHSMTCFDLPRRGFVDGDL 1335

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +E F +L  T M+ ++  +  S+E +   V++L RLH
Sbjct: 1336 VERFRELEPTEMEFVAAQVGASIEHIKLLVDDLARLH 1372


>gi|90108802|pdb|2B5N|A Chain A, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108803|pdb|2B5N|B Chain B, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108804|pdb|2B5N|C Chain C, Crystal Structure Of The Ddb1 Bpb Domain
 gi|90108805|pdb|2B5N|D Chain D, Crystal Structure Of The Ddb1 Bpb Domain
          Length = 323

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 183/323 (56%), Positives = 241/323 (74%), Gaps = 4/323 (1%)

Query: 68  VRNGIGINEQASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEETE 126
           +RNGIGI+E AS++L GIKG+W LRS  + + +DT LV+SF+ +TR+L +N E E+EETE
Sbjct: 4   MRNGIGIHEHASIDLPGIKGLWPLRSDPNRETYDT-LVLSFVGQTRVLMLNGE-EVEETE 61

Query: 127 IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
           + GF    QT FC +  + QL+Q+TS SVRLVS   + L +EWK P   +++VA+ N+SQ
Sbjct: 62  LMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQ 121

Query: 187 VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
           V++A G   L YL+I    L ++ H ++E+E++CLDI P+G++   S + A+G+WTDIS 
Sbjct: 122 VVVAVGRA-LYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISA 180

Query: 247 RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
           RI  LP   L+ KE LGGEIIPRS+L+  FE   YLLCALGDG L  F LN++TG L+DR
Sbjct: 181 RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDR 240

Query: 307 KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
           KKV+LGTQP  LRTF S +TT+VFA SDRPTVIYSSN KL++SNVNLKEV++MCP NS  
Sbjct: 241 KKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDG 300

Query: 367 FPDSLAIAKEGELTIGTIDDIQK 389
           +PDSLA+A    LTIGTID+IQK
Sbjct: 301 YPDSLALANNSTLTIGTIDEIQK 323


>gi|407923753|gb|EKG16818.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
            phaseolina MS6]
          Length = 1129

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 247/783 (31%), Positives = 413/783 (52%), Gaps = 42/783 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +EV++ + N+ PI+DF ++D+  R G+GQ          +VT SGA+KDGSLR VR+G+G
Sbjct: 356  IEVVQTFHNIAPILDFTIMDMGNRSGEGQSNEYSSGQARIVTGSGAFKDGSLRSVRSGVG 415

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + +Q ++ +L  I  +++  S+    +D  L+VS ++E+RI  ++ + EL+E E  +G  
Sbjct: 416  LEDQGAIGDLGSISNIFAFSSTASGEYDDTLLVSLVNESRIFCVDADGELDERESFKGLQ 475

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +L+QVT  +VR++   +  + +EW +P G  +    +N   ++L+ 
Sbjct: 476  LDESTLMTKNVPNYRLLQVTQFAVRIMDLENDMVVSEWHAPEGQVITDVDSNDRFIILSI 535

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG   + L I D I     K    + +ISC+ +    +N     I  VG W + +V I  
Sbjct: 536  GGVRAIILSIADTIHAVAEKDFGADSQISCVAMPQAADN-----ICFVGFWQNCTVAILG 590

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L  L  I    L   G  +PRS+LL          L  A  DG+++ F ++  T  L+ R
Sbjct: 591  LDGLQTIQTISLSEDGSSVPRSLLLTQIFANQPPTLFIATADGYVVTFSMDPSTFALSGR 650

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            K   LGTQ    R     N  + VFA  + P++IY S  +L++S V  ++ + +CPFN+ 
Sbjct: 651  KSTVLGTQQANFRALPRGNGLYNVFATCEHPSLIYGSEGRLVFSAVTAEKATCVCPFNAE 710

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN--QSC 423
            A+P S+AIA  GEL +  +D+ ++ H++++ + E  RRI +  Q + F + ++K   +  
Sbjct: 711  AYPRSIAIAASGELHLAVVDEERRTHVQTLHVNETVRRIAYSPQLKAFGLGTIKRVLRDR 770

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD---DSNVYYCVGTAYVLPE 480
             E  + HF RL D+  F+ +  + ++ +E     +     D   ++   + VGT++++ E
Sbjct: 771  EEVVQGHF-RLADEVIFKELDNFEMNEYEIVECAIRAELDDGDGETAERFIVGTSHLVEE 829

Query: 481  ENE-PTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            E +  T+GRILVF + ED +L++IAE  TKGA   L   + K++A + + + +Y +    
Sbjct: 830  EEQGSTRGRILVFEVTEDRRLKVIAEISTKGACRCLAMVDNKIVAGLIKTVVIYSFEYST 889

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEERARDY 594
              T  L  +         + +   G+ I V DL+KS+S+L YK   G     ++E AR  
Sbjct: 890  PSTPFLVKKASFRTSTAPIDITVTGNQIAVADLIKSVSVLEYKPGAGDQSDELKEVARHV 949

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH 654
              +W  A+  +D++ YL A+   NL  + ++  G T+E+R RL + G+  LGE VNR R 
Sbjct: 950  QVSWSMALAEVDENTYLQADAEGNLILLERDVSGVTEEDRKRLMLRGDMLLGEQVNRIRR 1009

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
              +      SD   IP   F TV G I + A +   +   L +LQ+ L   ++  G    
Sbjct: 1010 IDMATV---SDAPVIPRAFFATVEGSIYLFALIAPAKVDLLIRLQSQLADFVRSPGHYPF 1066

Query: 715  EQWRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTM--NVSVEELCKRVEELT 771
             ++R+F N+ +  D  N F+DGDLIE FLDL     +E+ K +  ++ VEE+   VE L 
Sbjct: 1067 LRYRAFRNQVREEDEPNRFVDGDLIERFLDLKPREQEEVVKGVYADLDVEEVRSLVETLR 1126

Query: 772  RLH 774
            RLH
Sbjct: 1127 RLH 1129


>gi|353232348|emb|CCD79703.1| putative dna repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 232/733 (31%), Positives = 377/733 (51%), Gaps = 115/733 (15%)

Query: 10   QLIKLNLQPDA-KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN  PD  + SY+ +LE Y N+GPIVD  +V LE +GQ Q++TCSGAYK+GSLR++
Sbjct: 346  QLIRLNPDPDPERNSYITILETYTNIGPIVD--MVLLETKGQNQLITCSGAYKEGSLRVI 403

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI+E A+++   IKG W     +D  FD  +VVS + +T++L +  +D++    +E
Sbjct: 404  RNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQLLHL-ADDDITALHLE 461

Query: 129  GFCSQTQTLFC--------------------HDAIYNQLVQVTSGSVRLV---SSTSREL 165
            GF +  QT++C                    ++ +   L+Q T+  +RL+   S  S+  
Sbjct: 462  GFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGC 521

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLD 222
              EWK P G  ++  ++    +++A+G    V   +G+       +V H Q+ +E++C+D
Sbjct: 522  LTEWKPPTGRGISCLSSFRHTIVVASGTELYVLKVVGESNNPKFEQVSHRQMSHEVACID 581

Query: 223  INPIGENPSYSQI-----------------------AAVGMWTDISVRIFSLPDLNLITK 259
            + P   + + + I                        AVG+W    + +  LP+L L+ +
Sbjct: 582  LTPFNRDRAIAAINAVSSNHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHE 641

Query: 260  EHL-------GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDRKKVS 310
            E L       G  ++PRSVL+   E I+YL  A+GDG L  + ++       L D K+VS
Sbjct: 642  EPLPETTASTGTALLPRSVLIAQLEDIAYLFAAMGDGTLYFYTIDPSEDHVCLRDPKRVS 701

Query: 311  LGTQP-ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
             GT P + LR + S+   +VF  S+ P VIYS   KL+++N+NLKEV+ M P N   + D
Sbjct: 702  AGTGPSMFLRQWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSD 761

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
             +A+     L IG++D+IQKLH+R++PL E P+R+  Q ++ +  + + + +   E    
Sbjct: 762  CIALVTPTALIIGSVDEIQKLHVRTLPLEETPKRLALQSETSSLGVITYRQEMFQEGMGF 821

Query: 430  HFVR------------------------LLDDQTFEFISTYPLDTF-------------- 451
              VR                           ++ F  I    L  F              
Sbjct: 822  KPVRSSISLSQKIPKSASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFY 881

Query: 452  ------EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI--VEDGKLQLIA 503
                  E   SI S      +   + VGTA+++ +E EP+KGRI +F    E  +L  + 
Sbjct: 882  FSQTLVEVAVSIASVQSDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVL 941

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 563
              +  G+VY +  FNG+LLAAIN  ++L+   +++D    L+  C  + +I+ L+++ +G
Sbjct: 942  VHDVNGSVYRIVDFNGRLLAAINSSVRLFD--IKEDS---LRLACSFNENIIVLFLRRKG 996

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 623
            DF++VGDLM+S++LL++K      E   R  +  W + +EILDD+ +L AE   NLF V 
Sbjct: 997  DFVLVGDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVS 1056

Query: 624  KNSEGATDEERGR 636
            ++    T E   R
Sbjct: 1057 RDLPENTKEPSFR 1069



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 32/180 (17%)

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 680
            + NS G + E + RL     +H G+FVN F  G+LV++  +     +  P  ++GTVNG 
Sbjct: 1154 KPNSSGVSGEMQ-RLVDCAYFHTGDFVNVFVRGNLVLQNAEERWTAVGYPGHLYGTVNGG 1212

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            +G++  +    + FL++++  L  ++  VGG +H+ WR+F  +++   A NF+DGDLIE+
Sbjct: 1213 LGLLVQVSPVLFAFLKEVEFRLSNLVVPVGGFSHDTWRAFKADREIKMAHNFVDGDLIET 1272

Query: 741  FLDLSRTRMDEISK--------------------------TMNVSVEELCKRVEELTRLH 774
              DLS   MD+ +K                          T   +VE+L K VEE++RLH
Sbjct: 1273 VTDLS---MDDKAKLVKGLRIPVNMNEFGTAGSTCTTDPETRECTVEDLVKVVEEMSRLH 1329


>gi|256088964|ref|XP_002580590.1| DNA repair protein xp-E [Schistosoma mansoni]
          Length = 1329

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 232/733 (31%), Positives = 377/733 (51%), Gaps = 115/733 (15%)

Query: 10   QLIKLNLQPDA-KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
            QLI+LN  PD  + SY+ +LE Y N+GPIVD  +V LE +GQ Q++TCSGAYK+GSLR++
Sbjct: 346  QLIRLNPDPDPERNSYITILETYTNIGPIVD--MVLLETKGQNQLITCSGAYKEGSLRVI 403

Query: 69   RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
            RNGIGI+E A+++   IKG W     +D  FD  +VVS + +T++L +  +D++    +E
Sbjct: 404  RNGIGIHEHATIDQDLIKGAWCFPIESDR-FDDTIVVSMVGQTQLLHL-ADDDITALHLE 461

Query: 129  GFCSQTQTLFC--------------------HDAIYNQLVQVTSGSVRLV---SSTSREL 165
            GF +  QT++C                    ++ +   L+Q T+  +RL+   S  S+  
Sbjct: 462  GFKTDEQTVYCATLSPANDSPRPESMMIDENNNTLDPLLLQATTSGLRLIGIQSLCSKGC 521

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLD 222
              EWK P G  ++  ++    +++A+G    V   +G+       +V H Q+ +E++C+D
Sbjct: 522  LTEWKPPTGRGISCLSSFRHTIVVASGTELYVLKVVGESNNPKFEQVSHRQMSHEVACID 581

Query: 223  INPIGENPSYSQI-----------------------AAVGMWTDISVRIFSLPDLNLITK 259
            + P   + + + I                        AVG+W    + +  LP+L L+ +
Sbjct: 582  LTPFNRDRAIAAINAVSSNHLDSTSSSTPDKSVPYLVAVGLWLGHGLALLKLPNLELVHE 641

Query: 260  EHL-------GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE--LTDRKKVS 310
            E L       G  ++PRSVL+   E I+YL  A+GDG L  + ++       L D K+VS
Sbjct: 642  EPLPETTASTGTALLPRSVLIAQLEDIAYLFAAMGDGTLYFYTIDPSEDHVCLRDPKRVS 701

Query: 311  LGTQP-ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
             GT P + LR + S+   +VF  S+ P VIYS   KL+++N+NLKEV+ M P N   + D
Sbjct: 702  AGTGPSMFLRQWRSQRKVNVFVCSNHPCVIYSIKNKLIFANLNLKEVNFMTPLNGLFYSD 761

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
             +A+     L IG++D+IQKLH+R++PL E P+R+  Q ++ +  + + + +   E    
Sbjct: 762  CIALVTPTALIIGSVDEIQKLHVRTLPLEETPKRLALQSETSSLGVITYRQEMFQEGMGF 821

Query: 430  HFVR------------------------LLDDQTFEFISTYPLDTF-------------- 451
              VR                           ++ F  I    L  F              
Sbjct: 822  KPVRSSISLSQKIPKSASRLPKTAPSSVSATERKFREIEVSSLLIFNQSNLEIQFAHNFY 881

Query: 452  ------EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI--VEDGKLQLIA 503
                  E   SI S      +   + VGTA+++ +E EP+KGRI +F    E  +L  + 
Sbjct: 882  FSQTLVEVAVSIASVQSDIHNGPLFAVGTAFLVEDEVEPSKGRIHLFRWDPESSRLDTVL 941

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 563
              +  G+VY +  FNG+LLAAIN  ++L+   +++D    L+  C  + +I+ L+++ +G
Sbjct: 942  VHDVNGSVYRIVDFNGRLLAAINSSVRLFD--IKEDS---LRLACSFNENIIVLFLRRKG 996

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 623
            DF++VGDLM+S++LL++K      E   R  +  W + +EILDD+ +L AE   NLF V 
Sbjct: 997  DFVLVGDLMRSLTLLLFKSNVNNFEAIGRHRHPRWTTCIEILDDEHFLAAEVENNLFVVS 1056

Query: 624  KNSEGATDEERGR 636
            ++    T E   R
Sbjct: 1057 RDLPENTKEPSFR 1069



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 32/180 (17%)

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 680
            + NS G + E + RL     +H G+FVN F  G+LV++  +     +  P  ++GTVNG 
Sbjct: 1154 KPNSSGVSGEMQ-RLVDCAYFHTGDFVNVFVRGNLVLQNAEERWTAVGYPGHLYGTVNGG 1212

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            +G++  +    + FL++++  L  ++  VGG +H+ WR+F  +++   A NF+DGDLIE+
Sbjct: 1213 LGLLVQVSPVLFAFLKEVEFRLSNLVVPVGGFSHDTWRAFKADREIKMAHNFVDGDLIET 1272

Query: 741  FLDLSRTRMDEISK--------------------------TMNVSVEELCKRVEELTRLH 774
              DLS   MD+ +K                          T   +VE+L K VEE++RLH
Sbjct: 1273 VTDLS---MDDKAKLVKGLRIPVNMNEFGTAGSTCTTDPETRECTVEDLVKVVEEMSRLH 1329


>gi|358056808|dbj|GAA97158.1| hypothetical protein E5Q_03834 [Mixia osmundae IAM 14324]
          Length = 1243

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 244/776 (31%), Positives = 399/776 (51%), Gaps = 48/776 (6%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V V+    NL PIVDFCVV  +  GQ  +VTCSGA   GSLR+VR G+G++  A+++L  
Sbjct: 490  VSVISAMANLAPIVDFCVVT-DDVGQSHLVTCSGAKNSGSLRLVRQGVGLSILATIDLPA 548

Query: 85   IKGMWSLRSSTDDPFDTFLVVSFISETRILAM---NLEDELEETEIEGFCSQTQTLFCH- 140
            ++  W L+ ++       ++VSF+  +++L++   NL      +E+        TL+   
Sbjct: 549  VQNAWPLKLASSSIKHDAILVSFLDRSQLLSLCNGNL------SELASPALTEPTLYAGT 602

Query: 141  --DAIYNQLVQVTSGSV-RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLV 197
              DA     +  T+ ++ RL      EL   W SP G  +  A+++ S +LLAT    LV
Sbjct: 603  LGDAGAQVAICATAKAILRLSIEKPSEL---WTSPTGDLITAASSDGSSLLLATSSKALV 659

Query: 198  YLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 257
             + +    +      Q   E+SCL         + SQIAAV  W+  ++ ++SLP L  +
Sbjct: 660  LMTLSPNGIALTTTKQTISEVSCL---AAWTTTTGSQIAAVASWSTNAILLYSLPHLEPV 716

Query: 258  TKEHLGGEIIPRSVLLCAFEGIS-YLLCALGDGHLLNFLLNMKTGELT--DRKKVSLGTQ 314
            T   L  + +P+S+L   FE  + +L   LG G L++F ++  +G +    RK V+LG +
Sbjct: 717  TGAELSFDHLPQSMLFQKFEDDAVHLFVGLGSGDLISFGIDAASGAVLPLSRKSVTLGKK 776

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
            P+ L   S+     VFA +DRPTV+  S  +L Y++ N + +  +   ++  F  SL + 
Sbjct: 777  PVLLSQCSAAGQPAVFAVTDRPTVVSRSAGRLSYASDNRRTLVAINQIDALRFEQSLMLV 836

Query: 375  KEGELTIGTIDDIQKLHIRSIPLGE-HPRRICHQEQSRTFAICSLK---NQSCAEESEMH 430
                +     D  + LH+RS+ LGE  PR+I H  + R +A+  L+   ++S    +   
Sbjct: 837  SPEGIQFARADGNESLHVRSLSLGELQPRKIAHSAELRAYAVLCLQETIDRSTGHLTRAG 896

Query: 431  FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV--LPEENEPTKGR 488
             V+ +D   F  + ++ L + E+G ++ + S       ++ VGTA+     +  EP KGR
Sbjct: 897  SVQFVDASDFALLDSFDLQSDEHGTALETVSL--HGAAHFAVGTAFSDRTVDAREPKKGR 954

Query: 489  ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI-NQKIQLYKWMLRDDGTRELQSE 547
            +L F+ +  K +       +G V+ L       LAAI N +++++      +     Q  
Sbjct: 955  VLTFMRDGDKFEQHVHAVLEGGVFGLCQLPNSFLAAIANAQVKVFHVT---EQAHIDQMT 1011

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL-- 605
            C   G  LA  + +R   I+VGDL +S+ LL +   +  + E AR+++ N MSAVE L  
Sbjct: 1012 C-WAGTFLAQSISSRDSQIIVGDLYRSVVLLQWDEAKDTLSEVAREHHVNGMSAVEFLGF 1070

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
             DD Y+G E   N+FT+ K     T E    LE  G +H+GE+V R R G+LV    D+ 
Sbjct: 1071 TDDRYIGTEQELNIFTLTKTK---TRERIDILETEGMFHIGEYVTRIRKGALVPGYTDTS 1127

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
             G  P ++FGT +G +GVI +   E  L L  L+ N+R VI+  GGL    WR+F    +
Sbjct: 1128 FGAAPQLLFGTSDGSLGVIVNCTPEVSLKLFALERNMRAVIRAFGGLEQVDWRAFRAPHR 1187

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEI-------SKTMNVSVEELCKRVEELTRLH 774
              +   F+DGD+I  F +L+ T+++++       S   N + E+L + V+EL R+H
Sbjct: 1188 VHEPVGFVDGDMIGRFAELNETQVNQVLQGASEHSALTNTTAEDLYRLVDELQRMH 1243


>gi|169611218|ref|XP_001799027.1| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
 gi|160702249|gb|EAT83885.2| hypothetical protein SNOG_08717 [Phaeosphaeria nodorum SN15]
          Length = 1140

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 238/779 (30%), Positives = 409/779 (52%), Gaps = 40/779 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ P++DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G
Sbjct: 373  MEIVQTFANIAPVLDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVG 432

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFC 131
            + +   + E++ I  ++ L+S+    +   L+V+F++ETRI   + + E+EE  E     
Sbjct: 433  LEDLGVLGEMEHISDLFGLKSNASAEYADTLLVTFVNETRIFRFDPQGEVEEVDEFASVA 492

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    ++VQVT G VR+       + +EW  P G ++  A+ N S VLL+ 
Sbjct: 493  LDETTLAAANISQGRVVQVTGGRVRVSDLDGGMITSEWVPPSGETITAASVNDSHVLLSL 552

Query: 192  GGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQ-IAAVGMWTDISVRIF 249
            GG  ++ L + G  +LTE K   +E +++C+ +      PS S  +  +G W +  + I 
Sbjct: 553  GGVSVITLNMDGLKVLTEKKFG-VESQVACIAL------PSTSSSMCFIGFWKNSQLAIC 605

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            SL  L  +    +  + +PRS+LL     +    L  A+ DG+++ +  +   GEL+ RK
Sbjct: 606  SLDTLEAVKTVQVSEDSVPRSLLLTQIFPDQPPTLFAAMADGNVVTYSFDTSNGELSGRK 665

Query: 308  KVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
             + LGT+  T R     N   +VFA  + P++IY+S  +L+YS V  +  + +CPF+S A
Sbjct: 666  SIVLGTREATFRALPRGNGLFNVFATCEHPSLIYASEGRLVYSAVTAENATTVCPFDSEA 725

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 426
            +P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K    A E
Sbjct: 726  YPGSVAIATSDDLRIALVDTERTTHVQTLKVDETVRRIAYSPGLKAFGLGTVKRILKAGE 785

Query: 427  SEM--HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
              M  HF +L+D+  F+ + TY L+  E    ++ C  +D S      + +GTAY+  + 
Sbjct: 786  EIMLSHF-KLVDEIQFKELDTYALNEEELVECVMRCDLADGSGGTAERFVIGTAYLDDQN 844

Query: 482  NEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 540
            +   +GRIL+  +  +  L+L+ E   KG    L    GK++AA+ + I +Y    R   
Sbjct: 845  STVERGRILILEVTPERVLKLVTEIAVKGGCRCLAMCEGKIVAALIKTIVVYDIEYRTQS 904

Query: 541  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNA 596
              +L            + +   G  I + DLMKS+ ++ Y+  E  + ++    AR +  
Sbjct: 905  KPDLVKAATFRCSTAPIDITVNGTQIAIADLMKSMVVVEYQRGETGLPDKLVEVARHFQV 964

Query: 597  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
             W +AV  +D++ YL ++   NL  + ++ +G TD+++ RL V  E  LGE VNR R   
Sbjct: 965  TWATAVAEVDENTYLESDAEGNLLVLYRDPKGVTDDDKRRLNVSSEMLLGEMVNRIRRID 1024

Query: 657  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
             V   PD+ V  +P    GTV G I + A +       L  LQ+NL  ++   G ++  +
Sbjct: 1025 -VATAPDAVV--VPRAFMGTVEGSIYLFALISQNYLDLLITLQSNLGNLVVSPGNMDFAK 1081

Query: 717  WRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +R+F N+ +T +  N F+DG+LIE FLD       +  + + V +E++   VE L RLH
Sbjct: 1082 FRAFKNQVRTEEEPNRFVDGELIERFLDCEEDVQRKAIEGLGVELEDIRSLVEGLRRLH 1140


>gi|384080885|dbj|BAM11105.1| damage-specific DNA binding protein 1, 127kDa, partial
           [Siebenrockiella crassicollis]
          Length = 364

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 186/367 (50%), Positives = 237/367 (64%), Gaps = 44/367 (11%)

Query: 353 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 412
           LKEV++MCP NS  +PDSLA+A    LTIGTID+IQKLHIR++PL E PR+IC+QE S+ 
Sbjct: 2   LKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQC 61

Query: 413 FAICSLK---------------------------------------NQSCAEESEMHFVR 433
           F + S +                                         S  EE E+H + 
Sbjct: 62  FGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLL 121

Query: 434 LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 493
           ++D  TFE +  +     EY  S++SC    D N Y+ VGTA V PEE EP +GRI+VF 
Sbjct: 122 IIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFH 181

Query: 494 VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
             DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W       +EL++EC H+ +
Sbjct: 182 YSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT----AEKELRTECNHYNN 237

Query: 554 ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
           I+ALYV+T+GDFI+VGDLM+S+ LL YK  EG  EE ARD+N NWMSAVEILDDD +LGA
Sbjct: 238 IMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 297

Query: 614 ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR-LPDSDVGQIPTV 672
           EN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGSLVM+ L ++      +V
Sbjct: 298 ENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQDSV 357

Query: 673 IFGTVNG 679
           +FGTVNG
Sbjct: 358 LFGTVNG 364


>gi|452003044|gb|EMD95501.1| hypothetical protein COCHEDRAFT_1165632 [Cochliobolus heterostrophus
            C5]
          Length = 1116

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 233/777 (29%), Positives = 398/777 (51%), Gaps = 35/777 (4%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G
Sbjct: 348  MEIVQTFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFC 131
            + +   + E++ I  ++ LRS+    +   L+VSF+ E+R+   + + E+EE  E     
Sbjct: 408  LEDLGVLGEMEHISELFCLRSAPSAQYTDTLLVSFVGESRVFRFDSQGEVEEVDEFVSLA 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    ++VQVT+G  R+       + +EW    G ++  A+ NA+ VL++ 
Sbjct: 468  LDETTLAAANIPQGRIVQVTNGRARICDLDGGMMTSEWVPADGKTITAASVNATHVLVSL 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +V L + DG+ + + K    E +++C+ + P G     S    VG W +  + I S
Sbjct: 528  GGVTIVSLSMADGLQVVKEKTFGAESQVACVTV-PSGT----SSTCFVGFWNNSQLAICS 582

Query: 251  LPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
            L  L  +    +  + +PRS+LL     +    L  AL DG+++ +  +    EL+ RK 
Sbjct: 583  LDTLEAVKTVQISDDSVPRSLLLTQIFPDQPPSLFVALADGNVVTYTFDPSNHELSGRKS 642

Query: 309  VSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            + LGT+  T R     +   +VFA  + P++IY+S  +L+YS V  ++ + +CPF+S A+
Sbjct: 643  IVLGTREATFRALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAY 702

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSCAEE 426
            P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K      EE
Sbjct: 703  PSSVAIATSQDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKHGEE 762

Query: 427  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEENE 483
              +   +L+D+  F+ + TY L+  E    ++ C   D S      + VGTAYV  +   
Sbjct: 763  IMLSHFKLVDEIQFKELDTYALNEEELVECVMRCELPDGSGGLAERFVVGTAYVDDQNTT 822

Query: 484  PTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
              +GRI+V  V   + L+L+ E   KG    L    GK++AA+ + I +Y +  R   T 
Sbjct: 823  SERGRIIVLEVTPERILKLVTEIAVKGGCRCLAICQGKIVAALIKTIVVYDFEYRAPSTP 882

Query: 543  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANW 598
            +L            + V   G  I + DLMKS+ ++ Y   E  + ++    AR Y   W
Sbjct: 883  DLVKLASFRCSTAPIDVTVNGSLIAIADLMKSLVIVEYTKGETGLPDKLVEVARHYQITW 942

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
             +AV  +D + YL ++   NL  + ++  G TD+++ RL +  E  LGE VNR R    V
Sbjct: 943  ATAVAEVDTNTYLESDAEGNLVVLYRDPNGVTDDDKRRLNISSEMLLGEMVNRIRR---V 999

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
              L  +D   +P    GTV G I +   +  +    L  LQ+NL  ++   G +   ++R
Sbjct: 1000 DVLTAADAVIVPKAFVGTVEGSIYLFGLISPDYQNLLMTLQSNLGSLVAAPGDMQFAKFR 1059

Query: 719  SFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +F N  ++  +   F+DG+L+E FLD+S     +    + V +EE+   +E L RLH
Sbjct: 1060 AFKNSVREEEEPMRFVDGELVERFLDVSEEVQHKAIDGLGVELEEVKGLIEALRRLH 1116


>gi|451856466|gb|EMD69757.1| hypothetical protein COCSADRAFT_32431 [Cochliobolus sativus ND90Pr]
          Length = 1116

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 231/777 (29%), Positives = 399/777 (51%), Gaps = 35/777 (4%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G
Sbjct: 348  MEIVQTFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFC 131
            + +   + E++ I  ++SL+S+    +   L+VSF+ E+R+   + + E+EE  E     
Sbjct: 408  LEDLGVLGEMEHISELFSLKSTASAQYIDTLLVSFVDESRVFRFDSQGEVEEVDEFVSLA 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    ++VQVT+G  R+       + +EW    G ++  A+ N + VL++ 
Sbjct: 468  LDETTLAAANIPQGRIVQVTNGRARICDLDGGMITSEWVPTDGKTITAASVNETHVLVSL 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +V L + +G+ + + K    E +++C+ + P G     S    VG W +  + I S
Sbjct: 528  GGVTIVSLSMANGLQVVKEKTFGAESQVACVTL-PSGT----SSTCFVGFWNNSQLAICS 582

Query: 251  LPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
            L  L  +    +  + +PRS+LL     +    L  AL DG+++ +  +    EL+ RK 
Sbjct: 583  LDTLEAVKTVQISDDSVPRSLLLTQIFPDQPPSLFVALADGNVVTYTFDQSNHELSGRKS 642

Query: 309  VSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            + LGT+  T R     +   +VFA  + P++IY+S  +L+YS V  ++ + +CPF+S A+
Sbjct: 643  IVLGTREATFRALPRGDGLFNVFATCEHPSLIYASEGRLVYSAVTAEKATTVCPFDSEAY 702

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSCAEE 426
            P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K      EE
Sbjct: 703  PGSVAIATSQDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKHGEE 762

Query: 427  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEENE 483
              +   +L+D+  F+ + TY L+  E    ++ C   D S      + VGTAYV  +   
Sbjct: 763  IMLSHFKLVDEIQFKELDTYALNEEELVECVMRCELPDGSGGLAERFVVGTAYVDDQNTT 822

Query: 484  PTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
              +GRI+V  V   + L+L+ E   KG    L    GK++AA+ + I +Y +  R   T 
Sbjct: 823  SERGRIIVLEVTPERILKLVTEVAVKGGCRCLAICQGKIVAALIKTIVVYDFEYRTPSTP 882

Query: 543  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNANW 598
            +L            + +   G  I + DLMKS+ ++ Y   E  + ++    AR Y   W
Sbjct: 883  DLVKLASFRCSTAPIDLTVNGSLIAIADLMKSLVVVEYTKGETGLPDKLVEVARHYQITW 942

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
             +AV  +D ++YL ++   NL  + ++  G TDE++ RL +  E  LGE VNR R    +
Sbjct: 943  ATAVAEVDTNMYLESDAEGNLVVLYRDPNGVTDEDKRRLNISSEMLLGEMVNRIRR---I 999

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
              L  +D   +P    GTV G I +   +  +    L  LQ+NL  ++   G +   ++R
Sbjct: 1000 DVLTAADAVIVPKAFVGTVEGSIYLFGLISPDYQNLLMTLQSNLGSLVAAPGDMQFAKFR 1059

Query: 719  SFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +F N  ++  +   F+DG+LIE FLD+S     +    + V +EE+   +E L RLH
Sbjct: 1060 AFKNSVREEEEPMRFVDGELIERFLDVSEEVQSKAIDGLGVELEEVKGLIEALRRLH 1116


>gi|345570887|gb|EGX53705.1| hypothetical protein AOL_s00006g33 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1133

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 242/799 (30%), Positives = 412/799 (51%), Gaps = 58/799 (7%)

Query: 20   AKGSYVEVLERYVNLGPIVDFCVVDLE---------RQGQGQVVTCSGAYKDGSLRIVRN 70
            +KG  +EV++   NL PI DF V+  E           GQ  ++TCSG + DG LR VR+
Sbjct: 349  SKGPRIEVVQSLPNLAPISDFIVLGTEVGGVEIHQYSAGQTMILTCSGGFYDGGLRSVRS 408

Query: 71   GIGINEQASV-ELQGIKGMWSL-RSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-I 127
            G+GI +   + E+ G++ MW+L R+  D+ FD  L+ SF +E+R  A   + E+EE +  
Sbjct: 409  GVGIRDIGLLGEMSGVQNMWALKRAILDNGFDDTLLFSFANESRAFAFGADGEVEEVDTF 468

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
            E F   T TL   +   ++LVQVT   V +V   + +L N W  P G  + +A+ + +++
Sbjct: 469  ENFFLDTTTLEAGNVGNDKLVQVTPFKVIVVEKATSKLWN-WAPPVGAKIVMASLSGARL 527

Query: 188  LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
            ++   G   +  ++    + ++ +   E EISC+ I P  +    S    VG W   S+ 
Sbjct: 528  VVVLNGRICLLFDLSSEPIKQIANRTFENEISCIHI-PTKQ----SDFLVVGFWMPASLA 582

Query: 248  IFSLPDLNLITKEHLG---GEIIPRSVLLCAFEG--ISYLLCALGDGHLLNFLLNMKTGE 302
            +  + DL  + +EHL    G + PRSV++   EG   S L   + DG ++++ +    G 
Sbjct: 583  LLRIADLETMKEEHLAVFEGSV-PRSVMVANMEGDGPSSLFVGMADGEVISYTITEGPGI 641

Query: 303  LTDRKKVSLGTQPITLRTFSSK---NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
            L D+K++ LGTQ +T      K   +++ V A  +RPT++Y    + +YS + L + S +
Sbjct: 642  LDDQKRIRLGTQTVTFEALPRKTGDDSSCVIATGERPTMVYGEEGRTVYSAITLNQASSV 701

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 419
              FN+ AFPD++ +A +  + I  ID+ +  H R  PL +  RR+   ++ + + + +++
Sbjct: 702  VAFNAEAFPDTVVVATDESVFIAKIDEARTTHTRMSPLCQFARRVAFSKEKKAYGVATIR 761

Query: 420  NQ---SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVG 473
            N    +   ES   ++ ++D+  ++ I  Y L   E   S+L  S ++        + VG
Sbjct: 762  NSIDTTTGMESSSCYIHVIDENFYDKIDAYELYPNELVESLLCASLANPDGTISEKFVVG 821

Query: 474  TAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 532
            TA +  + +E   GR+L   +  D  L+LI E E  GA +SL    G +LA +++ I LY
Sbjct: 822  TA-IGNDSDESEHGRLLFLELGADKMLRLITELELPGACHSLAIVKGYILAGLSKSIDLY 880

Query: 533  KW-MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL--IYKHEEG--AI 587
            ++   R      +Q         L + +   G  + VGDL+K + +L  +    EG   +
Sbjct: 881  RFSYTRGSLGASIQQISSIRAATLPVSLSVYGKRVFVGDLVKGVMVLEVVEGGGEGNDKL 940

Query: 588  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
             E  R Y  +W++A+E LD+D  + A+++ NL  +R+ S GATDE+  R+  + E  LGE
Sbjct: 941  VEVCRQYGVSWVTALEALDEDTCISADSDGNLVLLRRESTGATDEDTRRMRPLSEIRLGE 1000

Query: 648  FVNRFRHGSLVMRLPDSDV-GQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
             VN  R      R+ D    G +  P    GTV+G + ++  +  + +  L K Q N+ K
Sbjct: 1001 MVNCIR------RVNDPITQGYVVQPKAYLGTVDGGLFMLGLIHPDYFDILMKCQVNMAK 1054

Query: 705  VIKGVGGLNHEQWRSFNNEK-KTVDAKNFLDGDLIESFLDLSRTRM--------DEISKT 755
            VIKG+G L+  ++R++N +  +  +   F+DG+L+E FLDL    M        D+ +  
Sbjct: 1055 VIKGIGDLDFNRYRAYNTKGIQPEEPFRFVDGELVEKFLDLDEDAMRMVIDGANDDDNSQ 1114

Query: 756  MNVSVEELCKRVEELTRLH 774
            +  +V E+   VE L RLH
Sbjct: 1115 IECTVGEMKNIVETLKRLH 1133


>gi|452838792|gb|EME40732.1| hypothetical protein DOTSEDRAFT_177898 [Dothistroma septosporum
            NZE10]
          Length = 1138

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 241/792 (30%), Positives = 402/792 (50%), Gaps = 60/792 (7%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+KDGSLR VR+G+G
Sbjct: 365  IEVLQTFPNIAPILDFTVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKDGSLRSVRSGVG 424

Query: 74   INEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGF 130
            + ++  +   G  I  ++SLRSS        LVVSF+ +TR+   + E ++EE  E  GF
Sbjct: 425  LEDRGDLGSLGAPISEVFSLRSSAAAKLVDTLVVSFVDQTRVFVFDQEGDVEERDEFRGF 484

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
                 TLF  +    ++VQV+S S+ L  + S  + + W +P G ++    A+ S++LL+
Sbjct: 485  SLSDATLFAGNLPDGRVVQVSSTSILLADAESGMITDTWAAPGGANITAVAADRSKLLLS 544

Query: 191  TGGGHLVYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
              G  LV L++ G+ I  + +       E+SC     I  + S       G W D  V  
Sbjct: 545  LSGKALVALDLSGESIAVQARREFSSTEEVSC-----IALSASIPDTCVAGFWKDGKVAF 599

Query: 249  FSLPDLNLITKEHLGGE--IIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELT 304
             SL +L  IT E +  +   +PRS+ +     +  + L   L DG+++ + +        
Sbjct: 600  LSLHNLEAITTERVADDDLAVPRSLSIATILRDQPATLFVGLADGNVVTYTIESLQKPFA 659

Query: 305  DRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN 363
             RK + LGTQ          +   +VFA  + P++IY S  +++YS V  +  + +C FN
Sbjct: 660  ARKSIILGTQQANFAVLPRGDGLQNVFATCEHPSLIYGSEGRMVYSAVTAESATSICSFN 719

Query: 364  SAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC 423
            S ++ +++AIA   EL I  +D+ +  H++ + + E  RR  +  + + F +  ++    
Sbjct: 720  SNSYGNAIAIASNDELRIAAVDEERTTHVQDLFIHETVRRTAYSAELKAFGLGCIQRTLT 779

Query: 424  A--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD---DSNVYYCVGTAYVL 478
            A  EE + HF +L+D+  F+ + +Y L+  E   S++ C   D   D    + VGTAY+ 
Sbjct: 780  AGQEEVKSHF-KLVDEVAFKELDSYELNEDELVESVIRCKLDDGSGDGAERFAVGTAYLD 838

Query: 479  PEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
             +++   +GRIL+  + ED +L+L+ E   KGA   L    GK++AA+ + + +Y +   
Sbjct: 839  DQDSNTARGRILILEVTEDRRLKLVTELSVKGACRCLAVCEGKIVAALIKTVIIYDFEFA 898

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE----GAIEERARD 593
                  L  +  +      + V   G+ I V DLMKS+SL+ YK         + E AR 
Sbjct: 899  ASKA-TLTKKASYRTATAPIDVCVTGNVIAVTDLMKSMSLVEYKKGRTGMPDTLTEIARH 957

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
            +   W +AV  + D+ YL ++   NL  ++ ++ G ++E+R RL V  E  LGE VNR R
Sbjct: 958  FETLWGTAVANVADNTYLQSDAEGNLIVLQHDTNGFSEEDRRRLRVTSELLLGEMVNRIR 1017

Query: 654  -------HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKV 705
                   HG+LV          IP     TV G I + A + P +Q L + ++Q N+  +
Sbjct: 1018 RIDVTPTHGALV----------IPRAFLATVEGSIYLFALIVPGKQDLLM-RMQNNMASL 1066

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDA---KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
            +K  G +    +R F N+ +   A     F+DG+LIE FLD  +   +EI + + + +EE
Sbjct: 1067 VKSPGHVEFATFRGFKNQVRDEGANGPSRFVDGELIERFLDCGQDIQEEIIRDLGIELEE 1126

Query: 763  LCKRVEELTRLH 774
                VE L R+H
Sbjct: 1127 ARGMVESLRRIH 1138


>gi|330935579|ref|XP_003305038.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
 gi|311318228|gb|EFQ86975.1| hypothetical protein PTT_17772 [Pyrenophora teres f. teres 0-1]
          Length = 1115

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 238/782 (30%), Positives = 404/782 (51%), Gaps = 46/782 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ PI+DF ++D+  +           GQ ++VT SGAY+DGSLR VR+G+G
Sbjct: 348  MEIVQTFSNIAPILDFTIMDMGNRSAEGQTNEYSSGQARIVTASGAYQDGSLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFC 131
            + +   + E++ I  ++SL+S+    +   L+VSF++E+RI   + + E+EE  E     
Sbjct: 408  LEDLGVLSEMEHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVEEVDEFASLA 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    ++VQVT+G  R+       + +EW    G ++  A+ N S VL++ 
Sbjct: 468  LDETTLAAANISQGRIVQVTNGRARICDLDGGMIISEWLPMGGPTITAASINESHVLVSL 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIF 249
            GG  +V + + DG+ + + K    E +++C+ +      PS  S I  VG W +  + I 
Sbjct: 528  GGVTVVSISMADGLQVVKEKTFNAESQVACIAL------PSDSSSICFVGFWNNSGLAIC 581

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            SL  L  +    +  + +PRS+LL          L  AL DG+++ +  +  T EL+ RK
Sbjct: 582  SLDTLEPVKTVQISDDSVPRSLLLTQIFPAQPPSLFVALADGNVVTYAFDPSTHELSGRK 641

Query: 308  KVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
             + LGT+  T R     N   +VFA  + P++IYSS  +L+YS V  ++ + +CPF+S A
Sbjct: 642  SIVLGTREATFRALPRGNGLFNVFATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEA 701

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE 426
            +P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K     +E
Sbjct: 702  YPGSVAIATSEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKNDE 761

Query: 427  SEM--HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEE 481
              M  HF +L+D+  F+ + +Y L+  E    ++ C   D S      + +GTAY+  + 
Sbjct: 762  ELMASHF-KLVDEIQFKELDSYALNEEELIECVMRCELPDGSGGLAECFVIGTAYLDDQN 820

Query: 482  NEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 540
                +GRIL+  V   + L+L+ E   KG    L    GK++AA+ + I +Y  +     
Sbjct: 821  TTSERGRILILEVTPERILKLVTEIAVKGGCRCLATCEGKIVAALIKTIVIYD-VEYPTQ 879

Query: 541  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNA 596
            T  L            + +   G  I + DLMKS+ ++ Y   E  + ++    AR Y  
Sbjct: 880  TPFLTKLATFRCSTAPIDITVNGSKIAIADLMKSLVVVEYTKGEAGLPDKLVEVARHYQI 939

Query: 597  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
             W +AV  +D ++YL ++   NL  + ++  G TD+++ RL V  E  LGE VNR R   
Sbjct: 940  TWATAVAEVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLNVSSEMLLGEMVNRIRR-- 997

Query: 657  LVMRLPDSDVGQIPTVIFGTVNGVI---GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
             +  L  SD   IP    GTV G I   G+I+  P  Q L +  LQ+NL  ++   G ++
Sbjct: 998  -IDVLTASDAVVIPRAFVGTVEGSIYLFGLIS--PAHQNLLM-TLQSNLGALVPAPGDMD 1053

Query: 714  HEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
              ++R+F N  ++  +   F+DG+ +E FLD S     +  + + V +EE+   VE L R
Sbjct: 1054 FAKFRAFKNGVREEEEPMRFVDGEFVERFLDQSEEVQTKAIEGLGVGLEEVRGLVEGLRR 1113

Query: 773  LH 774
            LH
Sbjct: 1114 LH 1115


>gi|367033707|ref|XP_003666136.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
            42464]
 gi|347013408|gb|AEO60891.1| hypothetical protein MYCTH_2310607 [Myceliophthora thermophila ATCC
            42464]
          Length = 1043

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 247/807 (30%), Positives = 418/807 (51%), Gaps = 54/807 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG------------QGQVVTCS 57
            QL +L+LQ +   + +++++   N+GPI+DF ++D+  +G            Q ++VTCS
Sbjct: 249  QLFRLDLQNEDPKALLQLVQTLHNIGPILDFAIMDMGNRGDEGQLGNEYSSGQARIVTCS 308

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDGSLR VR+G+G+ +   + +L+  +G++SL+S    P    L VSF++ETR+   
Sbjct: 309  GVHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKS-YGAPKTDILAVSFLTETRVFKF 367

Query: 117  NLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            + + ++EE E   G     QTL   D    +L+QVT  +  ++ + S      WK     
Sbjct: 368  DAQGDVEELESFAGLAFDQQTLLATDLQGGRLLQVTPAAATVLDTESGLTVASWKPGDQR 427

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQ 234
            S+  A+AN+  +LL+  G  LV L I D + +   +    + +I+C+ +    +N     
Sbjct: 428  SIINASANSKSLLLSVDGTELVSLSISDDLQVVRTRDISKQDQIACIHVPAQPDN----- 482

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF--EGIS--YLLCAL 286
            +  VG W+  +V I  L  L  I  E L        IPR + L      G+S   L  A+
Sbjct: 483  VGVVGFWSSGTVSIIDLHTLEPIHGESLRTSQDDASIPRDLALVQILPPGVSGPTLFVAM 542

Query: 287  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKK 345
             DG+++ F +  K   L+ RK+V LG +   L      +  + +FA ++ P++IY S  +
Sbjct: 543  QDGNVVTFNIT-KDLALSGRKRVILGMRQARLHLLPQPDGIYSIFATTEHPSLIYGSEGR 601

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            ++YS V  +E +++CPF++ AFP+ +A+A + +L I  ID  ++ H++ + + E  RRI 
Sbjct: 602  IVYSAVTAEEATYICPFDAQAFPECIALATDKQLKICHIDRERRTHVKPLAMNEMVRRIA 661

Query: 406  HQEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFEFIS-TYPLDTFEYG----CSI-- 457
            +  + + F +  +K +  A EE      +L+D+  F+ +  ++PL    Y     C +  
Sbjct: 662  YSPKEKVFGLGCIKRELVAGEEVVQSSFKLVDEVIFDRVGRSFPLGAPSYTELVECVVRA 721

Query: 458  -LSCSFSDDSNVYYCVGTAYVLPEENEP---TKGRILVFIVE-DGKLQLIAEKETKGAVY 512
             L  S+ + +   + VGT+++   +  P    +GR+L F V+ D    LI   E KGA  
Sbjct: 722  ELRDSYGNPAE-RFIVGTSFLPDPDYGPGTDVRGRMLFFGVDADRNPYLILSHELKGACR 780

Query: 513  SLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
             +    +G ++A + + + + ++      T EL     +        +  RG+ I V DL
Sbjct: 781  CVAVMEDGTIVAGLTKTVVVCRYEETSSTTGELTRLASYRPSSYPAEICVRGNTIAVADL 840

Query: 572  MKSISLLIYKHEEGA--IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            MKS+SL+ Y   +G   + ERAR + + W +AV  + +  +L A+   NL  +R+N EG 
Sbjct: 841  MKSVSLVEYVPGDGTPRLVERARHFGSVWATAVGFVREGSWLEADAQGNLMVLRRNVEGV 900

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-P 688
            T E+R R+E+  E +LGE VNR R    V   P + V  +P    GTV G I +  ++ P
Sbjct: 901  TAEDRRRMEITSEMNLGEMVNRIREVE-VETTPGALV--VPRAFLGTVEGGIYMFGTVAP 957

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRT 747
            H Q L L + Q  L  V+K  G +    +R+F N ++  D    FLDG+L+E FLD+   
Sbjct: 958  HVQDLLL-RFQGKLADVLKTAGDIPFRSYRAFRNAEREGDGPFRFLDGELLERFLDVDEA 1016

Query: 748  RMDEISKTMNVSVEELCKRVEELTRLH 774
              + I K +  SVE++   VEEL R+H
Sbjct: 1017 TQEIICKGLGPSVEDMRNMVEELRRMH 1043


>gi|449295711|gb|EMC91732.1| hypothetical protein BAUCODRAFT_116696 [Baudoinia compniacensis UAMH
            10762]
          Length = 1148

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 235/794 (29%), Positives = 399/794 (50%), Gaps = 54/794 (6%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++ + N+ PI+DF ++D+  +           GQ ++VT SGAYKDGSLR VR+G+G
Sbjct: 365  MEVVQTFANIAPILDFTIMDMGNRSSDAPVNEFSSGQARIVTGSGAYKDGSLRSVRSGVG 424

Query: 74   INEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGF 130
            + +  S+   G  +  M+SLRSS +  F   LVV F+S TR+   +++ E+EE + + GF
Sbjct: 425  LEDVGSIGEMGAPVSAMFSLRSSPESHFVDTLVVGFVSYTRVFRFDVDGEVEEVDHLGGF 484

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
                 +L+  +    ++VQVT  +V +  + +R + + W  P G S+    A    +L++
Sbjct: 485  ELAAASLYAGNTSDGRIVQVTGSAVIVSHTETRTITSSWSLPDGRSITAVAAEGDSLLVS 544

Query: 191  TGGGHLVYLEIGDGILTEVKHAQL------EYEISCLDINPIGENPSYSQIAAVGMWTDI 244
             GG  LV L++ + + +E   A+       E ++SC+ ++      +   +  VG W + 
Sbjct: 545  IGGAELVVLDLSN-VSSERLEARTRRTFESEEQVSCIALSK-----AVRDVCVVGFWQES 598

Query: 245  SVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF--EGISYLLCALGDGHLLNFLLNM 298
             V   SL DL  I  E +        +PRSV+L     +    L   L DG+++ + +  
Sbjct: 599  RVAFLSLHDLQPIATERVADSFDTSAVPRSVVLANILQDAPPTLFVGLADGNVVTYTVQS 658

Query: 299  KTGELTDRKKVSLGTQP--ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 356
                 T RK   LGTQ    TL         +VFA  + P++IY    + +YS V  +  
Sbjct: 659  PQQPFTSRKSTILGTQQANFTLLPRGDGVLDNVFATCEHPSLIYGQEGRTVYSAVTAETA 718

Query: 357  SHMCPFNSAAFPDSLAIA-KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 415
              +C F+S A+  ++AIA +EGEL +  +D+ +  H++++ +GE  RRI +  + + F +
Sbjct: 719  QSICSFDSEAYSGAIAIATEEGELKLAMVDEERTTHVQTLRVGETVRRIAYSTELKAFGL 778

Query: 416  CSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV----- 468
             ++K   ++  EE    F +L+D+  F+ + T  L+  E    ++ C   D S       
Sbjct: 779  GTIKRVLRAGVEEVTSSF-KLVDEVAFQELHTVALNEDELVECVMRCQLDDGSGTGETAE 837

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             + VGTAY+     + TKGRILV  + E+ +L+++AE   KGA   L    G+++AA+ +
Sbjct: 838  RFVVGTAYLDDAPQQQTKGRILVLEVTEERRLKVVAELGLKGACRCLAVVLGRIVAALVK 897

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
             + +Y    +      L  +  +      + +   G  I V DLMKS+SL+ YK   G +
Sbjct: 898  TVVIYALEYQTPSHPFLVKKAAYRTSTAPIDICVTGSTIAVTDLMKSVSLVSYKPGRGGV 957

Query: 588  ----EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
                 E AR Y   W +A+  + ++ YL A+   NL  ++    G +DE+R RL  V E 
Sbjct: 958  PDTLSEIARHYETLWGTAIANVAENTYLEADAEGNLVVLQHEVNGYSDEDRRRLRPVSEM 1017

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
             LGE VNR R  S+    P +    +P     TV G I + A +   +   L +LQ  L 
Sbjct: 1018 LLGEMVNRIRSISV---QPTATAVVVPRAFLATVEGSIYLFALISPGKQDLLMRLQALLA 1074

Query: 704  KVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMDEISKTMNVSV 760
            + +K  G +   +WR F ++ + +  +    F+DG+L+E +L+       +++  +   V
Sbjct: 1075 ERVKSPGHVPFAKWRGFRSQVRDMGGEGPTRFVDGELVERYLEAPVEVQVDVASELGREV 1134

Query: 761  EELCKRVEELTRLH 774
            EEL   VE L R+H
Sbjct: 1135 EELRGMVEGLRRMH 1148


>gi|189205943|ref|XP_001939306.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975399|gb|EDU42025.1| DNA damage-binding protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1115

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 238/782 (30%), Positives = 407/782 (52%), Gaps = 46/782 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G
Sbjct: 348  MEIVQTFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTASGAYQDGSLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFC 131
            + +   + E++ I  ++SL+S+    +   L+VSF++E+RI   + + E+EE  E     
Sbjct: 408  LEDLGVLGEMEHISDLFSLKSTASAQYADTLLVSFVNESRIFRFDPQGEVEEVDEFASLA 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT+G  R+       + +EW    G ++  A+ N S VL++ 
Sbjct: 468  LDETTLAAANISQGRIIQVTNGRARICDLDGGMITSEWLPMGGPTITAASINESHVLVSL 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVRIF 249
            GG  +V + + +G+ + + K    E +++C+ +      PS  S I  VG W +  + I 
Sbjct: 528  GGVTVVSISMANGLQVVKEKTFGAESQVACIAL------PSDSSSICFVGFWNNSGLAIC 581

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCA-FEG-ISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            SL  L  +    +  + +PRS+LL   F G    L  AL DG+++ +  +  T EL+ RK
Sbjct: 582  SLDTLEPVKTVQISDDSVPRSLLLTQIFPGQPPSLFVALADGNVVTYAFDPSTHELSGRK 641

Query: 308  KVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
             + LGT+  T R     +   +VFA  + P++IYSS  +L+YS V  ++ + +CPF+S A
Sbjct: 642  SIVLGTREATFRALPRGDGLFNVFATCEHPSLIYSSEGRLVYSAVTAEKATTVCPFDSEA 701

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN--QSCA 424
            +P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K   ++  
Sbjct: 702  YPGSVAIATPEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKNGE 761

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPEE 481
            E    HF +L+D+  F+ + +Y L+  E    ++ C   D S      + +GTAY+  + 
Sbjct: 762  EVMASHF-KLVDEIQFKELDSYALNEEELIECVMRCELPDGSGGVAERFVIGTAYLDDQS 820

Query: 482  NEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 540
                +GRIL+  V   + L+L+ E   KG    L    GK++AA+ + I +Y  +     
Sbjct: 821  TTSERGRILILEVTPERILKLVMEIAVKGGCRCLATCEGKIVAALIKTIVIYD-VEYPTQ 879

Query: 541  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYNA 596
            T  L            + +   G  IV+ DLMKS+ ++ Y   E  + ++    AR Y  
Sbjct: 880  TPFLTKLATFRCSTAPIDITVNGPKIVIADLMKSLVVVEYTKGEAGLPDKLVEVARHYQI 939

Query: 597  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
             W +AV  +D ++YL ++   NL  + ++  G TD+++ RL V  E  LGE VNR R   
Sbjct: 940  TWATAVAEVDTNMYLESDAEGNLMVLYRDPNGVTDDDKRRLNVSSEMLLGEMVNRIRR-- 997

Query: 657  LVMRLPDSDVGQIPTVIFGTVNGVI---GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
             +  L  SD   IP    GTV G I   G+I+  P  Q L +  LQ+NL  +I   G ++
Sbjct: 998  -IDVLTASDAVVIPRAFVGTVEGSIYLFGLIS--PAHQNLLM-TLQSNLGALIPAPGDMD 1053

Query: 714  HEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
              ++R+F N  ++  +   F+DG+ +E FLD       +  + + V +EE+   +E L R
Sbjct: 1054 FAKFRAFKNGVRQEEEPMRFVDGEFVERFLDQGEEVQVKAIEGLGVGLEEVRGLIEGLRR 1113

Query: 773  LH 774
            LH
Sbjct: 1114 LH 1115


>gi|406865227|gb|EKD18269.1| CPSF A subunit region [Marssonina brunnea f. sp. 'multigermtubi'
            MB_m1]
          Length = 1146

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 247/803 (30%), Positives = 408/803 (50%), Gaps = 50/803 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
            Q+I+++L  D K  Y+ +++   N+ PI+D  V+D+     E Q      GQ ++VT SG
Sbjct: 356  QVIRVDL--DRKDHYITIIQTMQNIAPILDLAVMDMGNREGESQSNEYSTGQTRLVTGSG 413

Query: 59   AYKDGSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            A++ GSLR VR+G+G+ +   +  E+  I+ ++S+RS+    FD  LVVS  +ETR+   
Sbjct: 414  AFQSGSLRSVRSGVGLEDIGILVDEIGDIRDVYSMRSTAGTHFDDILVVSLPTETRVFTF 473

Query: 117  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
              E E E  E  G     QTL         ++QVT  SV+++      +  +W  P G  
Sbjct: 474  LGEIE-EVAEFRGLELNCQTLLASGLSNGMMLQVTESSVKILGPGPSYVAAKWTPPAGEY 532

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY--EISCLDINPIGENPSYSQ 234
            +  A+AN S VL++  G  LV L+IG G L EV    LE   +++C+ +       + S 
Sbjct: 533  ITDASANDSYVLVSVSGTTLVSLDIGQG-LKEVAVQPLEAADQVACVYVPR-----NLSD 586

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHL---GGEIIPRSV----LLCAFEGISYLLCALG 287
            I  VG W   S+ I +L +L +I  E L       IPR +    LL A      L  A+ 
Sbjct: 587  IGVVGFWKSGSISILNLSNLEIILSEDLRRKNNASIPRHIILAQLLPAVAAGPTLFVAME 646

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKL 346
            DG +L F ++  T  L+ RK + LGT+         +    +V A  + PT+IY+S  ++
Sbjct: 647  DGVVLTFNVDKSTFSLSGRKSLVLGTEHAKFHLLPREGGLNNVLATCEHPTLIYASEGRI 706

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS V   +    CPFNS  +P SL +A +  L I  IDD ++ H+R++ +G+  RRI +
Sbjct: 707  VYSAVTADDAKCACPFNSEEYPGSLVVATQRSLKISKIDDERQTHVRTVHIGKTVRRIAY 766

Query: 407  QEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTF-EFISTYPLDT------FEYGCSIL 458
                R F I C  +  +  EE       L++D  F E  +  PLD        EY     
Sbjct: 767  SGAERAFGIGCIERTMADKEERYTSTFSLVEDVKFAEVGNPVPLDDENGTELIEYIIRTE 826

Query: 459  SCSFSDDSNVYYCVGTAYVLPEENEPT-KGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 516
              +  +D    + VGT+++  E  +P  KGRILVF ++  K   L+A    K A   +  
Sbjct: 827  VLNAREDLAERFIVGTSFLDEESADPNIKGRILVFGIDPKKNPYLVASLNLKCACRRVAM 886

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
             +GK++A +N+ + ++K++   +   E +         + + +    + I + D+M+S+S
Sbjct: 887  LDGKIVAVLNKTVAMFKYVEITEKAGEFKKLATFRSSTVPIDIAITENIIAITDMMQSVS 946

Query: 577  LLIYKH-EEG---AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 632
            ++ Y   +EG    +E+ ARDY   W +AV  + D+ +L ++++ NL  +++N +G T E
Sbjct: 947  IVQYTPGKEGMPDKLEQVARDYQTCWGTAVTDIGDNSWLESDHHGNLLVLQRNIDGITLE 1006

Query: 633  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 692
            ++ RL + GE +LGE VN  R  ++    P      +P     T  G I + +++     
Sbjct: 1007 DKQRLRITGEMNLGEQVNMIRKIAID---PSPTAMVVPKAFLATTEGSIYLFSTILDGSQ 1063

Query: 693  LFLEKLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDE 751
              L +LQ N+ + +  +G L+ + +RSF + E+ T +   F+DG+LIE FLD S     +
Sbjct: 1064 DLLLRLQENITECVDTLGRLDFKTYRSFKSAERTTEEPYRFVDGELIERFLDESEDMQQQ 1123

Query: 752  ISKTMNVSVEELCKRVEELTRLH 774
            I + +  +VE +   VE L RLH
Sbjct: 1124 ICEGLGYTVEAIRDVVENLKRLH 1146


>gi|367044684|ref|XP_003652722.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
 gi|346999984|gb|AEO66386.1| hypothetical protein THITE_2114471 [Thielavia terrestris NRRL 8126]
          Length = 1187

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 248/843 (29%), Positives = 414/843 (49%), Gaps = 89/843 (10%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG------------QGQVVTCS 57
            QL +L+L+ D     V++++   N+GPI+DF ++DL  +G            Q ++VTCS
Sbjct: 356  QLFRLDLENDDARQLVQLVQTLPNIGPILDFEIMDLGNRGDEGQLANEYSSGQARIVTCS 415

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDG+LR VR+G+G+ +   + +L+  +G++ L S      DT L VSF++ETR+   
Sbjct: 416  GVHKDGTLRSVRSGVGLEDVGILADLEHCRGLFPLSSYGSPKTDT-LAVSFLTETRVFKF 474

Query: 117  NLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            +   ++EE E   G     QTL   +    QL+QVT  +  L+ + S      W      
Sbjct: 475  DSHGDVEEVESFSGMTFDQQTLLAMNLPKGQLLQVTPAAASLLDAESGVTIASWAPEGER 534

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILT-EVKHAQLEYEISCLDINPIGENPSYSQ 234
            ++  A+AN   +LL+ GG  LV L I +   T + K    + +++C+ + P         
Sbjct: 535  TIISASANPRWLLLSVGGTELVSLSIANDFQTVQAKDMNQQDQVACIHVAP-----GLDD 589

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCAL 286
            +  VG WT  +V I  L  L  I  E L        IPR + L      S     L  A+
Sbjct: 590  VGVVGFWTSGTVSIIDLHTLEPIHGESLRTSKDDASIPRDLALVQMLPPSASGPTLFVAM 649

Query: 287  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKK 345
             DG+++ F ++ K   L+ RK+V LG +          +    +FA ++ P++IY S  +
Sbjct: 650  QDGNVVTFNVS-KDLALSGRKRVILGMRQARFHLLPQPDGIFSIFATTEHPSLIYGSEGR 708

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            ++YS V  +E +++CPF++ AFPD + +A + ++ I  ID  ++ H++ + +GE  RRI 
Sbjct: 709  IVYSAVTAEEATYICPFDTEAFPDCIVLATDAQIRISQIDRERRTHVKPLQMGEMVRRIA 768

Query: 406  HQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFIS-TYPLDTFEYGCSILSCSFS 463
            +  + + F + C  ++    EE      +L+D+  F+ +  ++PL +  Y   +     +
Sbjct: 769  YSPREKVFGLGCIKRDLVAGEEVVQSSFKLVDEIIFDRVGRSFPLGSPSYTELVECVVRA 828

Query: 464  DDSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVE-DGKLQLIAEKETKGAVYS 513
            +  + Y      + VGT+Y+  P+    T  +GRILVF V+ D    L+   E KGA   
Sbjct: 829  ELPDSYGAPAERFLVGTSYLADPDLGAGTDARGRILVFGVDADRNPYLVLSHELKGACRC 888

Query: 514  LNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            L    +GK++A + + + + ++      T EL     +      + +  RG+ I V DLM
Sbjct: 889  LAVMDDGKIVAGLTKTVVVCRYEETSSTTAELTRLASYRPSTYPVELCVRGNTIAVADLM 948

Query: 573  KSISLLIY---------------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 617
            KS++L+ +               K  E  + E+AR + + W +AV  + DD +L A+   
Sbjct: 949  KSVALVEFVPAGADETGAAGPSSKRGEAKLVEKARHFGSVWATAVSHVQDDSWLEADAQG 1008

Query: 618  NLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
            NL  +R+N EG T E++ R+EV  E +LGE VNR R G  V   P + V  +P    GTV
Sbjct: 1009 NLMVLRQNLEGVTAEDKKRMEVTSEMNLGEMVNRIR-GIEVETTPGAIV--VPKAFLGTV 1065

Query: 678  N-------------------------GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
            +                         G+      +PH Q L L + Q  L  VIK  GG+
Sbjct: 1066 SLRCGESLFGMNERRFANTGQWQVEGGIYMFATVVPHAQDLLL-RFQAKLADVIKTAGGI 1124

Query: 713  NHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
                +R+F N ++  D    F+DG+L+E FLD+     + I + +  +VE++   VEEL 
Sbjct: 1125 EFRTYRAFRNAEREGDGPFRFIDGELLERFLDVDEATQEVICQGLGPTVEDMRNLVEELR 1184

Query: 772  RLH 774
            R+H
Sbjct: 1185 RMH 1187


>gi|166158025|ref|NP_001107422.1| damage-specific DNA binding protein 1, 127kDa [Xenopus (Silurana)
           tropicalis]
 gi|157422734|gb|AAI53474.1| Zgc:63840 protein [Danio rerio]
 gi|163916541|gb|AAI57552.1| LOC100135265 protein [Xenopus (Silurana) tropicalis]
          Length = 306

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 172/309 (55%), Positives = 220/309 (71%), Gaps = 15/309 (4%)

Query: 477 VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
           V PEE EP +GRI+VF   DGKLQ +AEKE KGAVYS+  FNGKLLA+IN  ++LY+W  
Sbjct: 2   VCPEEAEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT- 60

Query: 537 RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
                +EL++EC H+ +I+ALY++T+GDFI+VGDLM+S+ LL YK  EG+ EE ARD+N 
Sbjct: 61  ---AEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGSFEEIARDFNP 117

Query: 597 NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
           NWMSAVEILDDD +LGAEN FNLF  +K+S   TDEER  L+ VG +HLGEFVN F HGS
Sbjct: 118 NWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGS 177

Query: 657 LVMR-LPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
           LV++ L +S      +V+FGTVNG+IG++ SL    Y  L  LQ  L KVIK VG + H 
Sbjct: 178 LVLQNLGESSTPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHS 237

Query: 716 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----------SVEELCK 765
            WRSF+ E+KT  A  F+DGDLIESFLDL + +M E+  T+ +          +V+E+ K
Sbjct: 238 FWRSFHTERKTEQATGFIDGDLIESFLDLGQAKMQEVVSTLQIDDGSGMKREATVDEVIK 297

Query: 766 RVEELTRLH 774
            VEELTR+H
Sbjct: 298 IVEELTRIH 306


>gi|242803623|ref|XP_002484212.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218717557|gb|EED16978.1| UV-damaged DNA binding protein, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1140

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 244/799 (30%), Positives = 402/799 (50%), Gaps = 62/799 (7%)

Query: 20   AKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIV 68
            ++GS+ E+++   N+ PI+DF ++DL  +           GQ ++VT SGA+ DG+LR V
Sbjct: 360  SEGSF-EIIQTISNIAPILDFTIMDLGTREGDNYTHEFSSGQARIVTGSGAFNDGTLRSV 418

Query: 69   RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TE 126
            R+G+G+ E   + E++ I  MW+L+ S+ D F   LVV+F++ETRI   + + E+EE  E
Sbjct: 419  RSGVGMEELGVLGEMEHITDMWALQVSSTDEFSDTLVVTFVNETRIFQFSSDGEVEELDE 478

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              G      TL  ++    +++ VT   V +  + S  + ++W SP   ++  A  N  +
Sbjct: 479  FLGLNLAENTLLSNNLPGGRIIHVTERGVSIADTDSGMVISKW-SPDEQTITSAACNDER 537

Query: 187  VLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINP------IGENPSYSQIAAVG 239
            +++ TGG  +V L+I GD  +   K    + ++S + I P      I   P  +Q+A   
Sbjct: 538  LVVVTGGQVIVVLDITGDLKVLSQKDFDKDNQVSGVTIPPASTQAFIAAFPQKAQVA--- 594

Query: 240  MWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFL 295
                    + S  D   +  + LG   E  PR+VLL     +  S L  ++ DG ++ F 
Sbjct: 595  --------VLSFQDFKELHSQSLGIASEAFPRAVLLAEILEDSPSTLFVSMADGSVVTFF 646

Query: 296  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLK 354
             +     LT + K+ LG++  T +     N  + VFA  + P++IY S  +++YS VN +
Sbjct: 647  YDSDNHSLTSKNKLILGSEQPTFKKLPRGNGLYNVFATCEHPSLIYGSEGRIIYSAVNSE 706

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFA 414
              S +C FN+ A+PD++A+A   +L I  +D  +   I+++P+    RR+ +    + F 
Sbjct: 707  GASRVCHFNAEAYPDAIAVATSKDLKIALVDKERTTQIQTLPIEATVRRVAYSPTEKAFG 766

Query: 415  ICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY--- 469
            I ++K   Q  AE  E  FV L D+  F  + ++ L   E   S++       S+ Y   
Sbjct: 767  IGTIKRRLQDGAEIVESQFV-LADEIMFRKLDSFDLKPDELVESVIRAQMVVGSDAYNKP 825

Query: 470  -----YCVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLA 523
                 + VGTAY+  E  E  +GRIL+F V+   KL L  E   KGA  +L     K++A
Sbjct: 826  IYKDRFIVGTAYLDDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGNKIVA 885

Query: 524  AINQKIQLYKWMLRDD-GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
            A+ + + ++    +   G   L+    +      + +      IVV DLMKSIS ++  H
Sbjct: 886  ALVKTVVIFDVERKSQLGKHALKKVAAYRTSTAPVDIAVTDSTIVVADLMKSIS-IVESH 944

Query: 583  EEGAI----EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 638
            +  A+    +E AR +   W +AV  +  + +L ++   NL  +R+N +G T+E+R RLE
Sbjct: 945  KTDALTVEAKEVARHFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGVTEEDRRRLE 1004

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
            V  E  LGE VNR R  ++   L  S V   P    GTV G I + A +  E   FL +L
Sbjct: 1005 VTSELLLGEMVNRIRPVNI---LQTSTVAVNPKAFLGTVEGSIYLFALINPEHQDFLMRL 1061

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTM- 756
            QT +   +   G +   ++R+F +  +  D    F+DG+LIE FLD  R   +EI   + 
Sbjct: 1062 QTAITAYVDSPGYMPFSKFRAFRSSVREGDEPFRFVDGELIERFLDCDRPVQEEILGVVG 1121

Query: 757  -NVSVEELCKRVEELTRLH 774
                +E + K +E L RLH
Sbjct: 1122 SGYDLESVQKMIEALRRLH 1140


>gi|440639387|gb|ELR09306.1| hypothetical protein GMDG_03874 [Geomyces destructans 20631-21]
          Length = 1138

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 249/802 (31%), Positives = 419/802 (52%), Gaps = 54/802 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSG 58
            Q++KL+L  DAK    EV++   N+ PIVDF V+D+  +           GQ ++VT SG
Sbjct: 354  QVLKLDL--DAK--VAEVVQTLDNIAPIVDFTVMDMGSRSEEARANEFSSGQARIVTGSG 409

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            A+++GSLR VR+G+G+ +   + E+  IKG+++L+++  +  DT LV+SF +ETR+   +
Sbjct: 410  AFQEGSLRSVRSGVGLEDIGQLGEMDNIKGLYTLQTNNSEFHDT-LVISFSTETRVFRFD 468

Query: 118  -LEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
               +  E  E  G   +  TL   +    +++Q+T     L+ S S      W+  PG  
Sbjct: 469  SEGEVEEVEEFLGLSFEEHTLLAANVSNGRILQITPSKALLIDSESGVAVASWQPAPGEI 528

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQ 234
            +  A+ N    LL+  G  L+ L + D  L+E+         +++C+D+ P  E P    
Sbjct: 529  ITAASTNEDYALLSADGKSLISLNL-DNDLSEIARQDFGDTDQVACVDV-PNTETP---- 582

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAFEGISY---LLCALGD 288
            I  VG+W   SV I  L  L+ I  + L  +    +PRS++L      ++   LL A+ D
Sbjct: 583  IGLVGLWQSGSVSIIDLRTLHPIQGDTLRNDDTAAVPRSMVLAQILPKTFGPTLLVAMSD 642

Query: 289  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLL 347
            G + ++ +   T  LT+RK V LGTQ   LR    +    +VFA  +  ++IYSS  +++
Sbjct: 643  GVVHSYSVTPCTFALTNRKSVVLGTQQANLRVLPRAGGLMNVFATCEHSSLIYSSEGRII 702

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
            YS V  ++ + +CPFN+AA+PD++ +A   E+ I  ID  ++ H+R++P+GE  RR+ + 
Sbjct: 703  YSAVTAEDATFICPFNAAAYPDAIVVATASEIKISQIDTERRTHVRTLPMGETVRRVTYS 762

Query: 408  EQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLDTFEYGCSILSCSFSDD 465
               + F + ++K +    EE      RL+D+  F E    + L T +    + +   +  
Sbjct: 763  PSEKVFGLGAIKRELIDGEEVIESSFRLVDEIVFSELGKPFQLGTSQGEELVEAVIRAPL 822

Query: 466  SNVY------YCVGTAYVLPEENEPTKGRILVFIVEDGKLQL-IAEKETKGAVYSLNAFN 518
             N Y      + VGT+++        +GRILVF V+  +    IAE + KGA   L   +
Sbjct: 823  PNTYGTPQERFIVGTSFLDDNPGLSYRGRILVFGVDSSRNPYKIAEYKVKGACRCLGVID 882

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            GK++AA+ + I ++++      +  ++    +      + +   G+ I V DLMKS+SL+
Sbjct: 883  GKIVAALVKTIVVFEYTELSGTSARIEKVASYRTSTCPVDLAIEGNTIAVADLMKSVSLV 942

Query: 579  IYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 634
             Y+     E   + E AR + + W +AV  +D+  +L A+ + NL  +R+N    T E+R
Sbjct: 943  EYRAGTSGEAPTLVEVARHFQSVWATAVAHVDEG-WLEADADGNLIVLRRNEAAVTFEDR 1001

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVIGVIASLPHEQYL 693
             ++EV GE+HLGE VNR R     +R+  S+    +P     T  G + +  S+      
Sbjct: 1002 KKMEVTGEFHLGEQVNRIRK----IRVDASEGATVVPRAFLATTEGSLFLYGSVAPASQD 1057

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
             L +LQ  L + ++  G +    +RSF N E++T +   F+DG+LIE FLDL   R + +
Sbjct: 1058 LLLRLQQRLAENVETPGNIPFTTYRSFRNAERETEEPYRFIDGELIERFLDLDEERQEVV 1117

Query: 753  SKTMNVSVEELCKRVEELTRLH 774
             K +   VEE+   VEEL R+H
Sbjct: 1118 CKGL-AKVEEVRDLVEELRRMH 1138


>gi|396465264|ref|XP_003837240.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
            binding / protein binding [Leptosphaeria maculans JN3]
 gi|312213798|emb|CBX93800.1| similar to DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA
            binding / protein binding [Leptosphaeria maculans JN3]
          Length = 1089

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 232/812 (28%), Positives = 405/812 (49%), Gaps = 73/812 (8%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQ----------VVTCSGAYKDGSLRIVRNGIG 73
            +E+++ + N+ PI+DF ++D+  R G+GQ          +VT SGAY+DGSLR VR+G+G
Sbjct: 289  MEIVQTFSNIAPILDFTIMDMGNRSGEGQTNEYSSGQARIVTGSGAYQDGSLRSVRSGVG 348

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS 132
            + +   + E++ I  ++SL+S     +   L+V+F++E+R+   + + E+EE  +E F S
Sbjct: 349  LEDLGVLGEMEHISNLFSLKSDATAQYADTLLVTFVNESRVFKFDPQGEVEE--VEEFAS 406

Query: 133  ---QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
               +  TL   +    ++VQVTSG  R+       + +EW      ++  A+AN + VL+
Sbjct: 407  LALEETTLVAANISQGRVVQVTSGRARICDLDGGMIVSEWMPMGDQTITAASANDTHVLI 466

Query: 190  ATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDISVR 247
            + GG  +V L + DG+ + + K    E +++C+ +      PS  S +  +G W +  + 
Sbjct: 467  SLGGVTVVSLNMTDGLQVAQQKTFGTESQVACVAL------PSDSSSVCFLGFWMNSQLA 520

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTD 305
            I SL  L  I    +  E +PRS+LL     +    L  A+ DG+++ +  +  + EL  
Sbjct: 521  ICSLDTLETIKTVTISDESVPRSLLLTQVFPDQPPTLFAAMADGNVITYTFDPSSYELLG 580

Query: 306  RKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 364
            +K + LGT+  T R     +  + VFA  + P++IY+S  +L+YS V  ++ + +CPF+S
Sbjct: 581  KKSIVLGTREATFRALPRGDGIYNVFATCEHPSLIYASEGRLVYSAVTAEKATAVCPFDS 640

Query: 365  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN-QSC 423
             A+P S+AIA   +L I  +D  +  H++++ + E  RRI +    + F + ++K     
Sbjct: 641  EAYPGSVAIATSEDLRIALVDTERTTHVQTLKVDETVRRIAYSPSLKAFGLGTIKRILKN 700

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---YCVGTAYVLPE 480
             EE  +   +L+D+  F+ + TY L+  E    ++ C  +D S      + VGTAY+  +
Sbjct: 701  GEEIMLSHFKLVDEIQFKELDTYALNEEELVECVMRCELADGSGGLAERFVVGTAYLDDQ 760

Query: 481  ENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
                 +GRIL+  +  +  L+L+ E   KG    L    GK++AA+ + I LY    +  
Sbjct: 761  NATAERGRILILEVTPERVLKLVTELAVKGGCRCLAMCEGKIVAALIKTIVLYDVEFKTQ 820

Query: 540  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER----ARDYN 595
                L            + +   G  I + DLMKS++++ Y+  EG + ++    AR Y 
Sbjct: 821  SKPTLVKAATFRCSTAPIDITVNGPVITIADLMKSLAMVKYQKGEGGLPDKLVELARHYQ 880

Query: 596  ANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 655
              W +AV  +D + +L ++   NL  + +N EG TD+++  + +  E  LGE VNR R  
Sbjct: 881  VTWATAVAEIDTETFLESDAEGNLMVLSRNVEGVTDDDKRHMLISSEMLLGEMVNRIRRI 940

Query: 656  SLVMRLPDSDVGQIPTVIFGTVN--------------------------GVIGVIASLPH 689
              V   PD+ V  IP    GTV                           G I +   +  
Sbjct: 941  D-VQTAPDAVV--IPRAFVGTVRISPLLSSLPSSYPNNPPTNHQHTQVEGSIYLFGLIAP 997

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE--KKTVDAKNFLDGDLIESFLDLSRT 747
                 L  LQ+NL  ++   G ++  ++R+F N+  +   + K F+DG+L+E FLDL   
Sbjct: 998  SHLHLLMTLQSNLAALVPAPGNMDFAKFRAFRNQVRQDEEEPKRFVDGELVERFLDLGAE 1057

Query: 748  RMDEISKTMNVS-----VEELCKRVEELTRLH 774
               +  + + +      VE +   VE L RLH
Sbjct: 1058 AQAKAVQGLRLGEAELDVEAVRGLVEGLRRLH 1089


>gi|398391687|ref|XP_003849303.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
 gi|339469180|gb|EGP84279.1| hypothetical protein MYCGRDRAFT_87400 [Zymoseptoria tritici IPO323]
          Length = 1143

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 227/787 (28%), Positives = 394/787 (50%), Gaps = 47/787 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+KDGSLR VR+G+G
Sbjct: 367  IEVLQTFPNIAPILDFAVMDMGNRSSDAPVNEFSSGQARIVTGSGAFKDGSLRSVRSGVG 426

Query: 74   INEQASV-ELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGF 130
            + ++  +  L   I  +++LRS         LVVSF+S TR+     E ++EE E   GF
Sbjct: 427  LEDRGDLGSLDAPISSLFALRSRPAPAVVNTLVVSFVSHTRVFVFTAEGDVEEQEQYRGF 486

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
                 TL   +    +++Q+T+ SV L       + + W+SP G S+   +AN + +L++
Sbjct: 487  ELGESTLHAGNLADGRVIQITNSSVVLADQEGDMVTDRWQSPSGTSITAVSANGNNILVS 546

Query: 191  TGGGHLVYLEIGDGILTEVKHAQLEY----EISCLDINPIGENPSYSQIAAVGMWTDISV 246
              G  L+ L++    +    HAQ E+    ++SC+ ++P     S       G W D  V
Sbjct: 547  LKGASLLVLDVSGSTIK--VHAQREFGSDEQVSCIALSP-----SIPTQCVAGFWKDGKV 599

Query: 247  RIFSLPDLNLITKEHLGGE---IIPRSVLLCA-FEG-ISYLLCALGDGHLLNFLLNMKTG 301
                L  L     E +  E    +PRS+ +    EG  + L   L DG+++ + +   + 
Sbjct: 600  AFLDLETLKTQASETVTEEDSLAVPRSLTVAKILEGQPATLFVGLADGNVVTYSIQSASN 659

Query: 302  ELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
              T RK + LGTQ          N   +VFA  + P++IY S  ++++S V  +  + +C
Sbjct: 660  PFTARKSIILGTQQANFAVLPRDNGLENVFATCEHPSLIYGSEGRIVFSAVTAENATCIC 719

Query: 361  PFNS-AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-CSL 418
             F+S   + +++AIA   EL I  +D+ +  H++ + L +  RRI +    + F + C  
Sbjct: 720  SFDSFEPYGNAIAIASNDELKIAVVDEERTTHVQDLFLNQTVRRIAYSADMKAFGLGCIR 779

Query: 419  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYYCVGTA 475
            +  S   E  +   +L+D+  F+ + +Y L+  E   S++ C   D S      + +GTA
Sbjct: 780  RTLSAGREEVVSCFKLVDEIAFKELDSYQLNEDELVESVIRCKLDDGSGGDAERFVIGTA 839

Query: 476  YVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  ++    KGRILV  + ED +L+L+ E   +GA   L   +G+++AA+ + + +Y +
Sbjct: 840  YLDDQDASNAKGRILVLEVTEDRRLKLVTEISVRGACRCLAVSHGRIVAALIKTVIIYSF 899

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA----IEER 590
                  +  +  +  +      + +   GD I V DLMKS+SL+ +   +      + E 
Sbjct: 900  EYETPSSPAMVKKAAYRTSTAPIDMCVTGDIIAVTDLMKSMSLVQHTLGQAGGPDNLTEV 959

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR ++  W +AV  +D++IYL ++   NL  +  + +G ++E+R RL V  E  LGE VN
Sbjct: 960  ARHFDTLWGTAVANVDENIYLESDAEGNLVVLEHDVKGFSEEDRRRLRVTSEILLGEMVN 1019

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R   +    P  +   IP     TV G I + A +   +   L ++Q  + ++++  G
Sbjct: 1020 RIRRIDVS---PTPNATVIPRAFLATVEGSIYLFALIAEGKQDLLIRMQNKMAEMVQSPG 1076

Query: 711  GLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             +   ++R F  + + +  +    F+DG+LIE FLD       E++K +   VEEL   V
Sbjct: 1077 HVPFAKFRGFKTQVRDMGEEGPSRFVDGELIERFLDCDEDVQAEVAKELGGDVEELKIMV 1136

Query: 768  EELTRLH 774
            E L R+H
Sbjct: 1137 EGLKRIH 1143


>gi|350629921|gb|EHA18294.1| damage-specific DNA binding protein [Aspergillus niger ATCC 1015]
          Length = 1140

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 235/786 (29%), Positives = 401/786 (51%), Gaps = 45/786 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 364  LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 423

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+EE +   G  
Sbjct: 424  MEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLS 483

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       + NEW  P    +  A+AN   ++L +
Sbjct: 484  LSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANNDSIVLVS 543

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L+I + + +   K    + +IS + + P+    S + +  VG      V +  
Sbjct: 544  GGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVGFPQLAKVSVLD 598

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  +     LT  
Sbjct: 599  LGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYSFDASNYSLTGM 658

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 659  NRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSE 718

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--KNQSC 423
            A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F I ++  K +  
Sbjct: 719  AYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGIGTIERKLKDG 778

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNVY---YCVGTA 475
            AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V+   + VGTA
Sbjct: 779  AEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTA 837

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA+ + + +Y  
Sbjct: 838  YLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGV 897

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEER 590
            +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   E     ++ E 
Sbjct: 898  VNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGMPDSLTEV 957

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV GE  LGE VN
Sbjct: 958  ARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISLGEMVN 1017

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   ++ +G
Sbjct: 1018 RIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGKVESLG 1074

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVE 768
             +   ++R F +  ++T +   F+DG+LIE FL    +  +EI  ++  ++V+E+   +E
Sbjct: 1075 NIPFNEFRGFRSMVRETKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMMNVDEVKIMIE 1134

Query: 769  ELTRLH 774
             L RLH
Sbjct: 1135 ALRRLH 1140


>gi|317031116|ref|XP_001392900.2| UV-damaged DNA binding protein [Aspergillus niger CBS 513.88]
          Length = 1124

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 234/786 (29%), Positives = 401/786 (51%), Gaps = 45/786 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 348  LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+EE +   G  
Sbjct: 408  MEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLS 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       + NEW  P    +  A+AN   ++L +
Sbjct: 468  LSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANNDSIVLVS 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L+I + + +   K    + +IS + + P+    S + +  VG      V +  
Sbjct: 528  GGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVGFPQLAKVSVLD 582

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  + +   LT  
Sbjct: 583  LGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYSFDARNYSLTGM 642

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 643  NRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSE 702

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--KNQSC 423
            A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F I ++  K +  
Sbjct: 703  AYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGIGTIERKLKDG 762

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNVY---YCVGTA 475
            AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V+   + VGTA
Sbjct: 763  AEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTA 821

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA+ + + +Y  
Sbjct: 822  YLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGV 881

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEER 590
            +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   E     ++ E 
Sbjct: 882  VNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGSPDSLTEV 941

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV GE  LGE VN
Sbjct: 942  ARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISLGEMVN 1001

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   ++ +G
Sbjct: 1002 RIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGKVESLG 1058

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVE 768
             +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++  ++V+E+   +E
Sbjct: 1059 NIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMMNVDEVKIMIE 1118

Query: 769  ELTRLH 774
             L RLH
Sbjct: 1119 ALRRLH 1124


>gi|116195210|ref|XP_001223417.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
 gi|88180116|gb|EAQ87584.1| hypothetical protein CHGG_04203 [Chaetomium globosum CBS 148.51]
          Length = 1127

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 240/836 (28%), Positives = 410/836 (49%), Gaps = 84/836 (10%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSG 58
            QL +L+ Q +     +++++   N+GPI+DF ++D+ R            GQ ++VTCSG
Sbjct: 305  QLFRLDFQ-NEDVPPIQLVQTLANIGPILDFAIMDMGRGDEGQQGNEYSSGQARIVTCSG 363

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
             +KDGSLR VR+G+G+ +   + +L+  +G++SL++  + P    L  SF++ETR+   +
Sbjct: 364  VHKDGSLRSVRSGVGLEDVGILADLEHCRGLFSLKT-YEAPKTNILAASFLTETRVFKFD 422

Query: 118  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             + E+EE +   G     QTL        Q++QVT  +V L+ + S    + W      S
Sbjct: 423  PQGEVEELDSFAGMTFNQQTLLARCLSTAQILQVTPAAVTLLDAESGLTIDSWTPGAQKS 482

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            +  A+ N   +LL+  G  LV   I   + L   K    + +I+C+ + P+      + +
Sbjct: 483  IISASGNNKSLLLSVDGTELVLFSIDINLRLVRTKEIGYQDQIACIHVPPL-----RNDL 537

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAF---EGISYLLCALGD 288
            A VG W+  +V I  LP L  +  E L        IPR + L       G   L  A+ D
Sbjct: 538  AVVGFWSSGTVSIIDLPSLEPMHGEQLRTSPDDASIPRDLALVKLLDNVGGGTLFVAMQD 597

Query: 289  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV---FAASDRPTVIYSSNKK 345
            G+++ F L+ +   LT RK+V LG +          +  H+   FA ++ P++IY S  +
Sbjct: 598  GNVITFNLS-ENFRLTGRKRVILGMRQARFHLLPQPDAPHIYSIFATTEHPSLIYGSEGR 656

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            ++YS V  +E +++CPF++ AFPD + +A + +L I  ID  ++ H++ +P+ E  RRI 
Sbjct: 657  IVYSAVTAEEATYICPFDTEAFPDCIVLATDNQLKISHIDRERRTHVKPLPMNEMVRRIA 716

Query: 406  HQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLD----TFEYGCSI-- 457
            +  + + F + C  +     EE      +L+D+  F+ +  T+PL     T    C +  
Sbjct: 717  YSPKEKVFGLGCIRRELVNGEEIVESSFKLVDEVIFDRVGKTFPLGVPSRTELVECVVRA 776

Query: 458  -LSCSFSDDSNVYYCVGTAYVLPEENEP-------TKGRILVFIVE-DGKLQLIAEKETK 508
             L  S+ + +   + VGT+++   +  P        +GR+LV  V+ D    L+   + K
Sbjct: 777  ELRDSYGNPAE-RFLVGTSFLPDPDYGPGPGPAADARGRLLVLGVDADRNPYLVLSHDLK 835

Query: 509  GAVYSLNAFN--------GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
            GA   L            G ++A + + + + ++      T EL     +        + 
Sbjct: 836  GACRCLAVLGEDAGPNAAGLIVAGLTKTVVVCRYDETSSTTAELTRLASYRPSSYPAEIA 895

Query: 561  TRGDFIVVGDLMKSISLLIY--------------------KHEEGAIEERARDYNANWMS 600
             RG  I V DLMKSISL+ Y                      +   + E AR +++ W +
Sbjct: 896  VRGSTIAVADLMKSISLVEYIPAGSSSGSGGGGSGSGESGSDDGPRLVEHARHFSSVWAT 955

Query: 601  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 660
            AV  +++  +L A+   NL  +R+N EG T E++ R+EV  E +L E VNR R    V  
Sbjct: 956  AVGFVEEGSWLEADAQGNLMVLRRNVEGVTAEDKRRMEVTSEINLNEMVNRIRTID-VET 1014

Query: 661  LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 719
             P + +  +P    GTV G I +  ++ PH Q L L + Q+ L  V+K  G +    +R+
Sbjct: 1015 TPGAMI--VPKAFLGTVEGGIYMFGTVAPHVQDLLL-RFQSRLADVLKTAGDIEFRTYRA 1071

Query: 720  FNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            F N ++  D    F+DG+L+E FLD+  T  + + K +  +VE++   VEEL R+H
Sbjct: 1072 FRNAEREGDGPFRFVDGELLEKFLDVDETTQEAVCKGLGPTVEDMRNLVEELRRMH 1127


>gi|358380497|gb|EHK18175.1| hypothetical protein TRIVIDRAFT_80808 [Trichoderma virens Gv29-8]
          Length = 1161

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 228/813 (28%), Positives = 409/813 (50%), Gaps = 64/813 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL+ ++++   + S V+VL    N  PI+DF ++DL  +            GQ ++V   
Sbjct: 365  QLLHIDIETQ-QMSLVKVLS---NNAPIMDFTIMDLGNREGDAQSGNTFSSGQARIVAGC 420

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GAY+DGSLR +R+G+G+ ++  + E QG +G+++LRS   +  DT +++S ++ TR+L  
Sbjct: 421  GAYQDGSLRSIRSGVGLEDRGLLDEFQGTRGLFTLRSVESEKVDT-VIISTLTGTRVLRF 479

Query: 117  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
              ++  E    +G   +++TL   +    QL+Q+T   V ++   S      W+SP G  
Sbjct: 480  EPDNIEELYSFQGIDLESETLLAANLPNGQLLQITPRVVNVLDPDSGTSLCSWQSPEGKV 539

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIGENP 230
            +  A+AN    LL+  G  LV L + DG+   VK+A  +       +ISCL       +P
Sbjct: 540  ITAASANTKWALLSIDGSILVSLNLLDGLKAVVKNASQDSVSGQPDQISCLHA---ARDP 596

Query: 231  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----L 282
                   +G WT  ++ +  L  L  I  E L        +PR V L            +
Sbjct: 597  Q--DFGVIGWWTSGTISVVDLATLTPIHGEPLRQTDDSSSVPRDVALVQLHPPDISGPTM 654

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYS 341
            L AL DG++++F +++K   ++ RK V+LG+ P  L      +   +VFA ++  ++IYS
Sbjct: 655  LVALEDGNVISFNVSVKGFSISGRKTVTLGSGPARLHVLPQADGICNVFATTEHASLIYS 714

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 401
            S  +++YS     + + + PF+S AFPDS+ ++ E  + I  +D+ +  H++++P+ E  
Sbjct: 715  SEGRVVYSATTADDATFVAPFDSEAFPDSIVLSTEEHIRICHVDNERLTHVKALPMSETV 774

Query: 402  RRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDD-------QTFEFISTYPLDTFEY 453
            RR+ +    + F + C  K     EE     +RL+D+       + FE   +  L+  E 
Sbjct: 775  RRVAYSPGLKAFGLGCIRKELIENEEVITSTIRLVDEIIFQELGKPFELNGSASLELVE- 833

Query: 454  GCSILSCSFSDDSNV---YYCVGTAYVL---PEENEPTKGRILVFIVEDGK-LQLIAEKE 506
             C I+     D + V    + VGT++V     EE   T+GRILV  V++ + L  IA   
Sbjct: 834  -C-IIRAELPDSNGVPAERFLVGTSFVADPGTEEAGETRGRILVLGVDESRQLYQIASHN 891

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
             KG    L   +  ++A + + + +Y +         L            + +   G+ I
Sbjct: 892  LKGVCRCLAIMDDYIVAGLTKTVVVYGYTQETSTAASLNKLASFRPASFPIDLDVSGNII 951

Query: 567  VVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
             +GDLM+S++L+ +      ++  +EE+AR Y   W ++V  LD+  +L A+   N+  +
Sbjct: 952  GIGDLMQSLTLVEFTPGQDGKKPTLEEKARHYQQAWTTSVSALDESRWLEADAQGNIIVL 1011

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
            R+N E  T+++R +LE+  E ++GE +NR R    +   P  +   IP    G++ G + 
Sbjct: 1012 RQNQEAPTEQDRSQLEITSELNIGEQINRIRK---IQVAPAENAIVIPKAFLGSIEGTLY 1068

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESF 741
            +   +  +    L   Q+ L++ I+  G L+ + WR+F N+ +  +A   F+DG++IE F
Sbjct: 1069 LYGDIAPKYQDLLMTFQSRLQEYIQTPGNLSFDTWRAFRNQARDGEAPFRFVDGEMIERF 1128

Query: 742  LDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            LDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1129 LDLDEKQQELVCEGLGPSVEDMRNMIEELRRMH 1161


>gi|167517245|ref|XP_001742963.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778062|gb|EDQ91677.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1670

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 234/819 (28%), Positives = 401/819 (48%), Gaps = 75/819 (9%)

Query: 10   QLIKL--NLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            QLI+L  ++Q +A    V+VL+ Y N+GPIVDF +VDL+  GQ QVV+C G+ +DG LRI
Sbjct: 366  QLIQLLSHVQAEADNK-VKVLQEYPNIGPIVDFEMVDLDGHGQQQVVSCCGSNQDGCLRI 424

Query: 68   VRNGIGINEQASVELQGIKGMWSLRSST---DDPFDTFLVVSFISETRILAMNLED---- 120
            +R G+GI+  AS++L+G++ +W LRS++   +D  D  L + F+ +T  L++  ++    
Sbjct: 425  LRKGVGIDVLASLDLEGLQDLWCLRSASNLGEDQHDV-LALKFLEQTAFLSLAGDEVCLL 483

Query: 121  ----------ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWK 170
                      EL+  ++ G  ++   L C +      + VTS   RL+ +  R     W 
Sbjct: 484  YSTPTSHSYTELDGVDVAGANTELPALHCGNVRDGMWLVVTSQDARLLDAVDRTEVTRWS 543

Query: 171  SPPGYSVNVATANASQVLLATGGG-HLVYLEIGDGILTEVKHAQLEYEISCLDINPIGEN 229
             P G  ++V  +    + +A+G   + + L   +G L ++K+A L++EI+CL I   G +
Sbjct: 544  PPNGKGIDVCASTGDLLAVASGSDLYALSLSRTEG-LHDMKNATLDHEIACLSIRASGPD 602

Query: 230  PSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG 289
                 I A G+WTD S+R FS   L    K  +  +++  SV     EG  Y     GDG
Sbjct: 603  QGAGTILA-GLWTDFSLRAFSTRTLEEQAKVEVPTQVVSSSVASVTMEGTCYFFIGHGDG 661

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
             L   + +  +        V +G+ P+ LR         VF A+DRP V+ S   KLL+ 
Sbjct: 662  KLAYGVFDPLSSTFGAPHVVQVGSLPVKLRACKRGKDEFVFVATDRPMVVSSRRGKLLFC 721

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 409
            NV+          N+ A+ D LA  ++  L  G ++++Q L IR IPL E P  + + + 
Sbjct: 722  NVSAGACRTADVLNAEAYVDCLAYVEQDRLVFGKMENMQNLQIRKIPLDETPLGVTYHKS 781

Query: 410  SRTFAICSLKNQSCAEESE-MHFVRLLDDQTFEFISTYPLDTFE--YGCSILSCSFSDDS 466
            S  F + +   ++C    E + ++RL+D Q+FE   ++ L+  E  +G S+ +    +DS
Sbjct: 782  SGAFCVATDAARACPTPQEPICYLRLIDAQSFEVRDSFKLEQAESLFGHSLHTMQLRNDS 841

Query: 467  NVYYCVGTAYVLPEENEPTKGRILVFIV-EDGKLQLIAEKET-KGAVYSLNAFNGKLLAA 524
              Y  VGTA   P    P +GRILV  V +DGKL+L+       G ++SL AF   ++A 
Sbjct: 842  TEYIVVGTAMHDPNRPLPKQGRILVLRVNDDGKLELVVSHAIHDGGIFSLQAFRDGVVAG 901

Query: 525  INQKIQLYKWMLRD-DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
            IN +++ +       +   E+ S+    G      +   G+ ++VGD+++S++ + Y  +
Sbjct: 902  INGRLEYFSLESTPLERKVEVASQTVFRGMQTVSCLGVCGNTVLVGDILQSVTAVNYSEQ 961

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
                     D  + ++    +  +D +L  +++ NL       +   + +   + + G  
Sbjct: 962  RNRFVVGPGDPESRYLLTCFLPAEDRFLFCDSDQNLVLGMPPVD-TVENDASLMHLAGRI 1020

Query: 644  HLGEFVN-------------------------------RFRHGSLVMRLP-DSDVGQI-- 669
            H+G+ +N                               RF  GSL +     ++ G+   
Sbjct: 1021 HIGDNINSYVICACIHVWTPYLLCPDSTFCFAALFVTSRFAFGSLSLSYERPAEAGEAGE 1080

Query: 670  --------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
                    P ++F TV G +G+I  +  +   F+ ++Q  L  +   VGGL HE +RS  
Sbjct: 1081 DGAKQQSSPPIVFTTVLGGVGMILEVQQKHLWFMHEMQRRLADMGNAVGGLTHEDYRSTK 1140

Query: 722  NEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            N K+     A+ F+DG+LIESFL+L+   M+E+ K  ++
Sbjct: 1141 NGKRESVTPARCFVDGNLIESFLELTPEEMEEVMKEFHI 1179


>gi|320593036|gb|EFX05445.1| uv-damaged DNA-binding protein [Grosmannia clavigera kw1407]
          Length = 1504

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 244/849 (28%), Positives = 422/849 (49%), Gaps = 102/849 (12%)

Query: 10   QLIKLNLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTC 56
            QL +L+L     G + ++VL+   N+ P++DF V+D+  +            GQ ++VT 
Sbjct: 674  QLFRLDLAASPVGLHELQVLQ---NIAPVLDFTVMDMGNREDDQQLANEYASGQARIVTG 730

Query: 57   SGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDP---FDTFLVVSFISETR 112
            SG +KDGSLR VR+G+G+ +   + +L G++G++SLRS         DT LV SF++ETR
Sbjct: 731  SGVHKDGSLRSVRSGVGLEDIGILGDLGGVRGLFSLRSPQTQQQQQVDT-LVASFLTETR 789

Query: 113  ILAMNLEDELEETE-IEGFCSQTQTLFCHD-----AIYNQLVQVTSGSVRLVSSTSRELR 166
            +   + + E+EE E   G    TQTL   +     +  ++L+Q+T GSV L  + S  + 
Sbjct: 790  VFLFDGDGEIEEVEAFPGLNLGTQTLLATNLSSGSSSSSRLLQITPGSVTLAETASGTIV 849

Query: 167  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEV-KHAQLEYEISCLDINP 225
              W  P   ++  A+AN+  VLL+  G  LV L + + +     K      +I+CL    
Sbjct: 850  ASWTPPDDRTIVSASANSRWVLLSVEGTTLVSLSLDNSLAVAAQKEVGTTDQIACLH--- 906

Query: 226  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI--------IPRSVLLCAF- 276
                P    +  VG W    V   S+ DL  +  +H G  +        +PRS++L    
Sbjct: 907  --AAPQLLDVGVVGQWASGMV---SVVDLATLEPKHGGKSLRRRDDNASVPRSIVLAQVL 961

Query: 277  -EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF--SSKNTTHVFA 331
              G++   L  A+ DG+++ F ++     L+ RK V LGT+   L     S + T  +FA
Sbjct: 962  PPGMAGPTLFVAMDDGNVITFAVSPSDLSLSGRKSVVLGTRHARLHPLPQSDEATYSIFA 1021

Query: 332  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 391
             ++ P++IY S  ++ Y+ V  ++ + +C F++AAFP ++A+A + ++ +   D  ++ H
Sbjct: 1022 TTEHPSLIYGSEGRIAYAAVTAEDANFVCHFDAAAFPGAIAVATDSQIKLSRTDTTKQTH 1081

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFISTYPLDT 450
            +R+I +GE  RRI +    R FA+  +K + +   E     ++L+D+  F+ +   PL  
Sbjct: 1082 VRAIDMGETIRRIAYSATERVFALGCIKRELTQGREVVTSSLKLVDEVAFQPLGK-PLAL 1140

Query: 451  FEYGCSILSCSFS-------DDSNVYYCVGTAYVLP--EENEPTKGRILVFIVE-DGKLQ 500
               G  ++ C           +    + VGT+++     ENE T GRILV  V+ D    
Sbjct: 1141 EVEGTELVECVVRAELRDALGNPAERFLVGTSFMAAGSSENEHTLGRILVVGVDSDHSPY 1200

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
            +++    +G    L   +  ++A +++ + L ++      + EL+    +      + + 
Sbjct: 1201 IVSSHRVRGPCRCLAMVDDLIVAGLSKTVVLSRYTETSSMSGELKKVASYRTATYVVDLA 1260

Query: 561  TRGDFIVVGDLMKSISLLIY-------------------KHEEG-------------AIE 588
              G  I VGD+MKS +L+ Y                   K  +G              + 
Sbjct: 1261 VDGHMIAVGDMMKSTALVEYIPATSGDGEDEEDDGAGDNKKGKGKTADRSKTIAEGPKLV 1320

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
            ERAR Y A+W +AV  ++ D++L A+   NL  + ++ +G T +++ RL  VGE +LGE 
Sbjct: 1321 ERARGYQASWATAVCHVEGDLWLEADGFGNLTMLERDVQGVTADDKRRLRTVGEMYLGEM 1380

Query: 649  VNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 706
            VNR R  ++     ++  G +  P     TV G I ++ ++  E    L  LQT L  ++
Sbjct: 1381 VNRIRPIAV-----ETSPGAMVHPRAFLATVEGSIYMVGTIAPEAQDLLMNLQTKLAAIV 1435

Query: 707  KGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
            KG G  +   +RSF N E+++ +   F+DG+L+E FLD+      E+++ +  SVE+L  
Sbjct: 1436 KGPGNTSFSAYRSFRNAERESTEPFRFVDGELLERFLDVGEDVQKEVAQGLGPSVEDLRN 1495

Query: 766  RVEELTRLH 774
             +EEL RLH
Sbjct: 1496 IIEELKRLH 1504


>gi|255956643|ref|XP_002569074.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590785|emb|CAP96985.1| Pc21g20880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1140

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 238/790 (30%), Positives = 393/790 (49%), Gaps = 47/790 (5%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            GS  EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+
Sbjct: 361  GSSFEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRS 420

Query: 71   GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IE 128
            G+G+ E   + E++ I   W L++ + D F   L+V+F+ ETR+   + + E+EE +   
Sbjct: 421  GVGMEELGVLGEMEHITDFWGLQTRSKDDFLNTLIVTFVDETRVFQFSTDGEVEELDNFL 480

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            G      TL       ++++QVT   V +    S  +  EW       +  A+AN   ++
Sbjct: 481  GLSLTECTLLVTRLQGDRILQVTEQRVLVADLESGMVTFEWAPQDQKLITAASANEDHLV 540

Query: 189  LATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
            L   G  +   +I D + +   K    + +IS L +     +P+   IA  G      V 
Sbjct: 541  LVISGQIVASFDIRDNVQIITQKDLGADQQISGLTVP---SSPTGVFIA--GFPQSAKVS 595

Query: 248  IFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGISY--LLCALGDGHLLNFLLNMKTGEL 303
            I ++ D  ++  + LG  GE  PRSVL+      S+  L  ++ DG ++ F LN +   L
Sbjct: 596  IMAIKDFAILQTKSLGPTGESFPRSVLVAEVLADSHPTLFISMADGCVITFSLNPQDYSL 655

Query: 304  TDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            ++  K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C  
Sbjct: 656  SEMNKLILGSEQPTFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHL 715

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ- 421
            N+ AFPDS+A+A E EL I  +D  +   I+++P+G   RR+ +    + F I ++  + 
Sbjct: 716  NAEAFPDSIAVATEKELKIALVDKERTTQIQTLPMGSTVRRVAYSPSEKAFGIGTIDRKL 775

Query: 422  -SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YYCV 472
             + AE  + HFV L D+  F  +    L   E   S++        D N        + V
Sbjct: 776  VNGAEVVKSHFV-LADEIMFRRLDALELGPDELVESVVRAELPAGKDENGKEIMKDRFVV 834

Query: 473  GTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 531
            GTA+   E++E  +GRIL+  V+ G KL  +AE    GA  +L      ++AA+ + + +
Sbjct: 835  GTAFADEEQDESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGDCVVAALVKTVVV 894

Query: 532  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH----EEGAI 587
            Y+  + + G  +L+    +      + V    D I V DLMKS+ L+ Y      E   +
Sbjct: 895  YRVKINNVGPMKLEKLAAYRTSTAPVDVIVVDDLIAVADLMKSLCLVRYTPGHAGEPAKL 954

Query: 588  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
             E  R Y   W +A+  + D+ +L ++   NL  + +N  G T +++ RL    E  LGE
Sbjct: 955  TEVGRHYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNMNGVTAQDKHRLMPTSEISLGE 1014

Query: 648  FVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 706
             VNR R     + +P  S V   P     TV G I + A +  E   FL  LQ +L   I
Sbjct: 1015 MVNRIRP----VNIPQLSSVMVTPRAFMATVEGSIFLFAVINPEHQDFLMTLQASLSTKI 1070

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVS-VEELC 764
              +G L+ +++RSF    ++ +A   F+DG+LIE FL+ S +  +EI + +  S V E+ 
Sbjct: 1071 NSLGNLSFDKFRSFRTMVRSAEAPYRFVDGELIEQFLNCSPSMQEEIVQEIGSSDVVEVK 1130

Query: 765  KRVEELTRLH 774
            + +E L RLH
Sbjct: 1131 RMIEALRRLH 1140


>gi|340960602|gb|EGS21783.1| hypothetical protein CTHT_0036510 [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1100

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 245/819 (29%), Positives = 416/819 (50%), Gaps = 68/819 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQG------------QGQVVTCS 57
            QL++L+L+       ++++E + N+GPI+DF ++D+  +G            Q ++VTCS
Sbjct: 296  QLLRLDLENQNPKQRLQLIESFQNIGPILDFAIMDMGNRGDSGQPGNEYSSGQARIVTCS 355

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDG+LR VR+G+G+ +   + +L+  +G++SLRS      +  LV+SF++ETR+   
Sbjct: 356  GVHKDGTLRSVRSGVGLEDIGILADLELCRGLFSLRSHGSLKTN-ILVMSFLTETRVFKF 414

Query: 117  NLEDELEETEIEGFCSQT---QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 173
            + + ++EE  +  FC  T   QTL   D    Q++ VT  +  L+ + S      W    
Sbjct: 415  DHQGDIEE--LSSFCGMTLDQQTLLAVDLPSGQILHVTPAAATLLDTESGVAITSWTPEE 472

Query: 174  GYSVNVATANASQVLLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSY 232
            G  +  A+ANA  +LL+  G  LV L + + + + + K+     +I+CL + P       
Sbjct: 473  GRCIINASANAEWLLLSVDGVGLVSLSLSNDLRILKEKNLNQSDQIACLHVPP-----QS 527

Query: 233  SQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSV----LLCAFEGISYLLC 284
            S I  VG WT  +V I  L  L  I  E L        IP+ +    LL        LL 
Sbjct: 528  SGIGVVGFWTSGTVSIIDLHTLEPIHGESLRTSKDDTSIPQDLALVQLLPPEVSGPLLLI 587

Query: 285  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSN 343
            A  DG++++F ++      + +++V LG           +N  + V A ++ P++IY S 
Sbjct: 588  ATQDGNVVSFNISSDYS-FSGKRRVVLGVTQAKFHLLPQENNLYSVLATTEHPSLIYGSE 646

Query: 344  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRR 403
             +++YS V  +E +++CPF+S AFPD +A+A + ++ +  +D  +K ++RS+PL E  RR
Sbjct: 647  GRIVYSAVTAEEAAYVCPFDSEAFPDCVALATDSQIKLARLDRERKTYVRSLPLNEMVRR 706

Query: 404  ICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSILSCS 461
            I +  + + F +  +K +    EE      +L+D+  F+ +  +  L +  Y   +   +
Sbjct: 707  IAYSPKEKVFGLGCIKRELVKGEEIVQSSFKLVDEVLFDRVGKSIELGSPSYTELVECVT 766

Query: 462  FSDDSNVY------YCVGTAYVLPEE---------NEPTKGRILVF-IVEDGKLQLIAEK 505
             ++  + Y      + VGT+Y LP+          N   +GRILV  I  D     I   
Sbjct: 767  RAEFIDSYGNPAERFLVGTSY-LPDPDYSPAPSHGNPEARGRILVLGIDSDRNPYQILSY 825

Query: 506  ETKGAVYSLNAF-NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
            + KGA   L    +GK++  + + + + ++      T +L     +      + +   G 
Sbjct: 826  QLKGACRCLAVMDDGKVVVGLTKAVTVCEYKETSSTTAQLTKLASYRPSTYPVEIAIHGR 885

Query: 565  FIVVGDLMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
             I V DLMKSISL+ Y   EEG    + ERAR Y + W +AV  + + ++L A+   NL 
Sbjct: 886  TIAVADLMKSISLVDYIPAEEGGQAKLVERARHYQSAWSTAVGYVQNGLWLEADAQGNLQ 945

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
             +R+N +G T+++R R+E+  E +LGE VNR R  + V   P++ +  IP    GTV G 
Sbjct: 946  VLRQNVDGITEDDRKRMELTAEINLGEMVNRIRSIT-VETSPEALI--IPRAFLGTVEGG 1002

Query: 681  IGVIASL-PHEQYLFLEKLQTNLRKVIKGVG---GLNHEQWRSFNNEKKTVDAK-NFLDG 735
            I +  ++ PH   L L + Q  +  VIK VG     N   +R+F N ++       FLDG
Sbjct: 1003 IYMFGTIAPHALDLLL-RFQEKVADVIKAVGDSDNANFRSYRAFKNAERVGHGPFRFLDG 1061

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +L+E FLD+     + I   +  +VE++   VEEL R+H
Sbjct: 1062 ELLERFLDVDEAIQEVICSGLGPTVEDMRNIVEELRRMH 1100


>gi|342885673|gb|EGU85655.1| hypothetical protein FOXB_03801 [Fusarium oxysporum Fo5176]
          Length = 1160

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 213/798 (26%), Positives = 403/798 (50%), Gaps = 45/798 (5%)

Query: 17   QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDGS 64
            Q D + + V +++ + N  PI+DF ++D+  +            GQ ++V   GAY+DGS
Sbjct: 368  QIDVESATVTLVQSFSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYRDGS 427

Query: 65   LRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            LR +R+G+G+ ++  + EL+G +G+++LRS   D  DT LVVS I+ETR+L+ + E  +E
Sbjct: 428  LRSIRSGVGLEDRGVLDELEGTRGLFTLRSYGSDLVDT-LVVSAITETRVLSFDREGGIE 486

Query: 124  ET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E    +G    T+TL   +    QL+Q+T  SV L+      + ++W  P G S+  A+A
Sbjct: 487  EIYSFQGMSLDTETLLASNLPNGQLLQITPRSVVLLDPEGGTVTSKWDVPSGKSITRASA 546

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
            N+   LL+  G  LV L +   +   V+ +Q         I+ I        +  VG W+
Sbjct: 547  NSKWALLSVDGTSLVSLNLLQNLAVNVQQSQNNSGSQADQISCIHAARDPPDLGVVGWWS 606

Query: 243  DISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALGDGHLLNF 294
               + +  +  L  +  E +        +PR + L            LL A+ DG+++ F
Sbjct: 607  SGQISLIDMASLKPLHGESMRQTEDSATVPRDIALVQLHPPEISGPTLLVAMEDGNVVTF 666

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNL 353
             ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  ++IYS+  ++++S    
Sbjct: 667  NVSTKDFAVSGRKSVTLGSNPARLHILPQQDGTSNVFVTTEHASLIYSAEGRVIFSATTA 726

Query: 354  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTF 413
             + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  RR+ +    + F
Sbjct: 727  DDATFVAPFDSHAFPDSVILSTDQHIRICHVDKERLTHVKALPVNETVRRVAYSPGLKAF 786

Query: 414  AICSLKNQSCA-EESEMHFVRLLDDQTF-EFISTYPLD---TFEYGCSILSCSFSDDSNV 468
             + S+K +    EE      RL+D+  F E  S +PLD   + E    ++     D    
Sbjct: 787  GLGSIKKELVGNEEVVSSSFRLVDEIVFKELGSPFPLDASSSLEIVECVIRAELPDVGGN 846

Query: 469  Y---YCVGTAYVLPEENEP--TKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLL 522
            +   + VGT+++     +P  T GRILV  V+  + +  I     KG    L   +  ++
Sbjct: 847  HVERFIVGTSFISDGVEDPNGTGGRILVLGVDSNRQVYQIVSHNLKGPCRCLGMIDDNII 906

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-- 580
            A +++ +  Y ++     +  LQ    +    L + +   G+ I V DLM+S+SL+ +  
Sbjct: 907  AGLSKTVVAYSFLQETSSSGSLQKLAVYRPAALPVDLDISGNMIGVVDLMQSLSLVEFIP 966

Query: 581  --KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 638
                 +  +EERAR +   W ++V  ++ + +L A++  NL  +++N +  T+++R RLE
Sbjct: 967  AQDGNKAKLEERARHFEPLWATSVCHIEGERWLEADSKGNLVVLQRNVDAPTEQDRSRLE 1026

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEK 697
            +  E ++GE +NR R     + +P ++ G + P     +  G + +   +  +    L  
Sbjct: 1027 ITSEMNIGEQINRIRK----LHVPMAENGIVHPRAFLASAEGSLYLYGDIAPQYQDLLMT 1082

Query: 698  LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTM 756
             Q+ + + I   G +  + WRSF NE +  +    F+DG+++E FLD+   + + + + +
Sbjct: 1083 FQSKMEEYIHVPGSVEFKLWRSFRNENRESEGPFRFIDGEMVERFLDMDEGKQELVCEGL 1142

Query: 757  NVSVEELCKRVEELTRLH 774
              S+E++   +EEL R+H
Sbjct: 1143 GPSIEDMRNLIEELRRMH 1160


>gi|154303693|ref|XP_001552253.1| hypothetical protein BC1G_08731 [Botryotinia fuckeliana B05.10]
          Length = 1087

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 245/822 (29%), Positives = 420/822 (51%), Gaps = 76/822 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
            Q+++++L+    G  V +L+   N+ PI+DF V+D+     E Q      GQ ++VT SG
Sbjct: 285  QVVQIDLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSG 342

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
             ++ GSLR VR+G+G+++ A + E++GI+ +++L S    P DT LVVSF +ETR    +
Sbjct: 343  GFEGGSLRSVRSGVGLDDTAILAEMEGIRKVFALHSGPTLPNDT-LVVSFSTETRFFKFD 401

Query: 118  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             + ++EE E ++   S ++TL  ++     ++QVT   V +   +     + W+ P G  
Sbjct: 402  TQGDIEEVETVKNLSSTSETLLTYNLDEGCILQVTQHEVSIYGKSPG---HRWQPPNGQI 458

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQI 235
            +  A+ N + +LL++ G  L  L I    L EV   +L + +++C+ +  +        I
Sbjct: 459  ITAASGNQNYILLSSNGRTLFTLSIQQN-LAEVAFQELGDDQVACIHVPQV-----MGDI 512

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL---GGEIIPRSVLLCA-----FEGISYLLCALG 287
              VG+W   SV +  L  LN I  E L    G  IPR + L         G + L  ++ 
Sbjct: 513  GVVGLWKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALTQILPPELSGPT-LFVSME 571

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKL 346
            DG +L+F ++     L+ RK + LGTQ   L+     NTT +VFA  + P++IY S  + 
Sbjct: 572  DGIVLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRT 631

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS V  ++   +C  NS A+P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +
Sbjct: 632  VYSAVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAY 691

Query: 407  QEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSC 460
              + ++FAI ++K + +  +E      RL+D+  F E    Y L    +  E        
Sbjct: 692  SAKEKSFAIGAIKRELTKGQEVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELP 751

Query: 461  SFSDDSNVY--YCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAF 517
            +   D  +   + VGT++ L EE    +GR+L+F V  D    +IA    KG+   +   
Sbjct: 752  TRHGDGELVERFLVGTSF-LHEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVL 810

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            +GK++AA+N+ + +Y +      +  L+    +      + +    + I V D+MKSI+L
Sbjct: 811  DGKIVAALNKTVVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIAL 870

Query: 578  LIYKHEEGA------IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            + Y    GA      +EE AR     + ++V  +D D YL  +++ NL  +++N EG T 
Sbjct: 871  VEYT--PGADGLPDKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTR 928

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 691
            E++ R+EV  E +LGE VNR +  ++       D   IP    GT  G I + + +P + 
Sbjct: 929  EDKTRMEVTCEMNLGEMVNRVKRINVET---SKDALLIPRAFLGTTEGSIYLFSLIPPQN 985

Query: 692  YLFLEKLQTNLRKV-----IKGV-------------GGLNHEQWRSF-NNEKKTVDAKNF 732
               L +LQ+ L  +     I+G              G L+  ++RS+ +  ++T +   F
Sbjct: 986  QDLLMRLQSRLASLPSASSIRGSSDSTSPHQIELSPGNLDFNKYRSYISATRETSEPFRF 1045

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +DG+LIE FLDL     + +++ + V  E+L   VE L RLH
Sbjct: 1046 VDGELIERFLDLEVEVQEHVAEGLGVKAEDLRGMVEGLRRLH 1087



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 37/273 (13%)

Query: 367 FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-SCAE 425
           +P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +  + ++FAI ++K + +  +
Sbjct: 5   YPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAYSAKEKSFAIGAIKRELTKGQ 64

Query: 426 ESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSCSFSDDSNVY--YCVGTAYVL 478
           E      RL+D+  F E    Y L    +  E        +   D  +   + VGT++ L
Sbjct: 65  EVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELPTRHGDGELVERFLVGTSF-L 123

Query: 479 PEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
            EE    +GR+L+F V  D    +IA    KG+   +   +GK++AA+N+ + +     +
Sbjct: 124 HEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKTVVMNATTAK 183

Query: 538 DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
            +                       G  +V+G+            E  AI E A D    
Sbjct: 184 AN----------------------LGGLVVLGE----TKFTYLDDESKAIVEYALDEAVL 217

Query: 598 WMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
           W +A E +D+  YL  ++   L+ +    +GAT
Sbjct: 218 W-AAWEPIDERTYLLGDDYGFLYILTILVDGAT 249


>gi|70992271|ref|XP_750984.1| UV-damaged DNA binding protein [Aspergillus fumigatus Af293]
 gi|66848617|gb|EAL88946.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
            Af293]
 gi|159124553|gb|EDP49671.1| UV-damaged DNA binding protein, putative [Aspergillus fumigatus
            A1163]
          Length = 1140

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 232/786 (29%), Positives = 393/786 (50%), Gaps = 45/786 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 364  LEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 423

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + ++  I  +W L+  +   F   L+V+F+ ETR+   + + E+EE +   G  
Sbjct: 424  MEELGVLGDMDHITDLWGLQVGSSGDFLDTLLVTFVDETRVFRFSSDGEVEEMDHFLGLS 483

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       +  EW  P  + +  A+AN   ++L  
Sbjct: 484  LSESTLLATNLPGGRILQVTEQRVLIAEIEGGMVIYEWTPPNQFIITAASANDDSIVLVA 543

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L I + + +   K    + +IS + +     +P+   IA       +SV    
Sbjct: 544  GGELVTVLNITNEVQVVTQKDFGADSQISGVTVP---SSPTGVCIAGFPQLAKVSV--LK 598

Query: 251  LPDLNLI--TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L DL+ +  T   + GE  PRSVL+     +    L  ++ DG ++ +  N     LT  
Sbjct: 599  LQDLSELHTTSVGMAGEAFPRSVLVANVLTDSPPTLFVSMADGSVITYSFNTNNFSLTGM 658

Query: 307  KKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K+ LG+ QP   +        +VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 659  TKLILGSEQPTFKKLPRGSGLFNVFATCENPSMIYGSEGRIIYSAVNSEGASRICHFNSE 718

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
            A+P+S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I +++ +    
Sbjct: 719  AYPESIAVATSHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGIGTIERKLVDG 778

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------DDSNVYYCVGTA 475
             E  +  FV L D+  F  +  + L   E   S++   F         D+    + VGTA
Sbjct: 779  TEIVKSRFV-LADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDEVKDRFIVGTA 837

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E +E  +GRIL+F V++G KL  +AE   KGA  +L     K++AA+ + + +YK 
Sbjct: 838  YLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAALVKTVVVYKV 897

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA----IEER 590
            +  + G   L+    +      + V   G+ I V DLMKS+ L+ YK  E      + E 
Sbjct: 898  INNNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGENGTPDTMTEV 957

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV GE  LGE VN
Sbjct: 958  ARHFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVTGEISLGEMVN 1017

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P    GTV G I + A +  +   FL +LQ  +   ++ VG
Sbjct: 1018 RIRPVN-IQQL--ASVAVTPRAFLGTVEGSIYLFAIINPDHQDFLMRLQATIAGKVELVG 1074

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVEELCKRVE 768
             +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  T+  +SV+E+   +E
Sbjct: 1075 NIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVSTVGKMSVDEVKGMIE 1134

Query: 769  ELTRLH 774
             L RLH
Sbjct: 1135 ALRRLH 1140


>gi|239613967|gb|EEQ90954.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ER-3]
 gi|327353314|gb|EGE82171.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1199

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 236/807 (29%), Positives = 398/807 (49%), Gaps = 55/807 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCS 57
            QLI++      +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT S
Sbjct: 406  QLIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVTGS 459

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GA+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+   
Sbjct: 460  GAFNDGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVFYF 519

Query: 117  NLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
              +  +EE  E  G      TL   +    +++QVT  +VR+       +  EW      
Sbjct: 520  TPDGGVEEKDEFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQK 579

Query: 176  SVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 234
            ++  A++N   ++L  GG  L+  +I G+  +   K   ++ ++S + +     +P+ S 
Sbjct: 580  AITAASSNDDHLVLMVGGQVLMIFDIRGEIKVAGEKDFGVDTQVSGVTVT---ASPARSC 636

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGH 290
            I  +    ++ V   SL DL +     LG  G+ +PRSVL+        + L  ++ DG 
Sbjct: 637  ILCLPQTAEVIV--MSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGS 694

Query: 291  LLNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
            + +F  N     LT   K++LG+ QP   +        +VFA  ++P++IYS+  +++YS
Sbjct: 695  VFSFSFNATDFSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYS 754

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 409
             VN  + S +C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +   
Sbjct: 755  AVNSDQASRICHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRRVAYSAP 814

Query: 410  SRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 467
             R F I ++K   +  AE     F+ L D+  F  +  Y L+  E   S++   F DD +
Sbjct: 815  ERAFGIGTIKRTLEDGAEVIASRFM-LADEIMFRELDVYDLNKDELVESVIRAQFPDDKD 873

Query: 468  V--------YYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFN 518
                      + VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L    
Sbjct: 874  SEGEELMKDLFIVGTSYLDDFGEGSIRGRILAFEVTPNRQLGKVAEMPVKGACRALAIVQ 933

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
             K++AA+ + + +Y           L     +      + +   G+ I V DLMKS+S++
Sbjct: 934  DKIVAALMKTVVVYTLSKGQFADYILTKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIV 993

Query: 579  IYKHE----EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 634
             Y+       G++ E AR +   W +AV  +  D +L ++   NL  +R+N  G T+++R
Sbjct: 994  EYQQGTDGLSGSLTEVARHFQTLWSTAVAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDR 1053

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 694
             RLEV  E  LGE VNR R  ++   L  ++    P    GTV G I +   +       
Sbjct: 1054 RRLEVTSEVLLGEMVNRIRPVNIQASL-GTEAAISPRAFLGTVEGSIYLFGIINPTYQDL 1112

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI- 752
            L +LQ+ +  ++   GG+   ++R+F N  ++  +   F+DG+LIE FL       +EI 
Sbjct: 1113 LMRLQSAMAGMVVTPGGMPFNKFRAFRNTVRQAEEPYRFVDGELIERFLGCGAELQEEIV 1172

Query: 753  -----SKTMNVSVEELCKRVEELTRLH 774
                      V+VE +   VEEL R+H
Sbjct: 1173 GKVIADGVAGVTVERVKAIVEELKRMH 1199


>gi|347838030|emb|CCD52602.1| similar to DDB1B (Damaged DNA Binding protein 1 B); damaged DNA
            binding / protein binding [Botryotinia fuckeliana]
          Length = 1157

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 245/822 (29%), Positives = 420/822 (51%), Gaps = 76/822 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
            Q+++++L+    G  V +L+   N+ PI+DF V+D+     E Q      GQ ++VT SG
Sbjct: 355  QVVQIDLESPEHG--VTLLQTLPNIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSG 412

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
             ++ GSLR VR+G+G+++ A + E++GI+ +++L S    P DT LVVSF +ETR    +
Sbjct: 413  GFEGGSLRSVRSGVGLDDTAILAEMEGIRKVFALHSGPTLPNDT-LVVSFSTETRFFKFD 471

Query: 118  LEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             + ++EE E ++   S ++TL  ++     ++QVT   V +   +     + W+ P G  
Sbjct: 472  TQGDIEEVETVKNLSSTSETLLTYNLDEGCILQVTQHEVSIYGKSPG---HRWQPPNGQI 528

Query: 177  VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQI 235
            +  A+ N + +LL++ G  L  L I    L EV   +L + +++C+ +  +        I
Sbjct: 529  ITAASGNQNYILLSSNGRTLFTLSIQQN-LAEVAFQELGDDQVACIHVPQV-----MGDI 582

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL---GGEIIPRSVLLCA-----FEGISYLLCALG 287
              VG+W   SV +  L  LN I  E L    G  IPR + L         G + L  ++ 
Sbjct: 583  GVVGLWKSGSVSLLDLATLNTIVSEDLRRADGASIPRDIALTQILPPELSGPT-LFVSME 641

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKL 346
            DG +L+F ++     L+ RK + LGTQ   L+     NTT +VFA  + P++IY S  + 
Sbjct: 642  DGIVLSFNVDKSDCSLSGRKSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRT 701

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS V  ++   +C  NS A+P S+ +A   EL +  ID+ ++ H+R++P+GE  RR+ +
Sbjct: 702  VYSAVTAEDAIAVCSLNSVAYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAY 761

Query: 407  QEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTF-EFISTYPL----DTFEYGCSILSC 460
              + ++FAI ++K + +  +E      RL+D+  F E    Y L    +  E        
Sbjct: 762  SAKEKSFAIGAIKRELTKGQEVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELP 821

Query: 461  SFSDDSNVY--YCVGTAYVLPEENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAF 517
            +   D  +   + VGT++ L EE    +GR+L+F V  D    +IA    KG+   +   
Sbjct: 822  TRHGDGELVERFLVGTSF-LHEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVL 880

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            +GK++AA+N+ + +Y +      +  L+    +      + +    + I V D+MKSI+L
Sbjct: 881  DGKIVAALNKTVVMYDYEETSSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIAL 940

Query: 578  LIYKHEEGA------IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            + Y    GA      +EE AR     + ++V  +D D YL  +++ NL  +++N EG T 
Sbjct: 941  VEYT--PGADGLPDKLEEVARHAQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTR 998

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 691
            E++ R+EV  E +LGE VNR +  ++       D   IP    GT  G I + + +P + 
Sbjct: 999  EDKTRMEVTCEMNLGEMVNRVKRINVET---SKDALLIPRAFLGTTEGSIYLFSLIPPQN 1055

Query: 692  YLFLEKLQTNLRKV-----IKGV-------------GGLNHEQWRSF-NNEKKTVDAKNF 732
               L +LQ+ L  +     I+G              G L+  ++RS+ +  ++T +   F
Sbjct: 1056 QDLLMRLQSRLASLPSASSIRGSSDSTSPHQIELSPGNLDFNKYRSYISATRETSEPFRF 1115

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +DG+LIE FLDL     + +++ + V  E+L   VE L RLH
Sbjct: 1116 VDGELIERFLDLEVEVQEHVAEGLGVKAEDLRGMVEGLRRLH 1157


>gi|212539802|ref|XP_002150056.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei ATCC
            18224]
 gi|210067355|gb|EEA21447.1| UV-damaged DNA binding protein, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1139

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 232/792 (29%), Positives = 398/792 (50%), Gaps = 49/792 (6%)

Query: 20   AKGSYVEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIV 68
            ++GS+ E+++   N+ PI+DF ++DL  +           GQ ++VT SGA+ DG+LR V
Sbjct: 360  SEGSF-EIIQTISNIAPILDFTIMDLGAREGENYTHEFSSGQARIVTGSGAFNDGTLRSV 418

Query: 69   RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TE 126
            R+G+G++E   + E++ I  MW+L+ S+   F   LVV+F++ETR+   + + E+EE  E
Sbjct: 419  RSGVGMDELGVLGEMEHITDMWALQISSPGDFSDTLVVTFVNETRVFRFSSDGEVEELDE 478

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              G      TL   +    +++ VT   V +  + S  + ++W SP G+++     N  +
Sbjct: 479  FLGLNLAENTLLSSNLPGGRIIHVTESGVSIADTDSGMVTSKW-SPDGHTITSVACNDER 537

Query: 187  VLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +++ TGG  +  L+I GD  +   K    + ++S + I P     + SQ+       +  
Sbjct: 538  LVVVTGGQIIATLDITGDLKVLSQKDFGKDNQVSGVTIPP-----APSQVCIAAFPQNAL 592

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V +  L     +  + LG   E  PR+VLL     +  S L  ++ DG ++ F  + ++ 
Sbjct: 593  VAVLDLHRFEELHSQSLGVASEAFPRTVLLAEILADSSSTLFVSMADGSVVTFSYDAESH 652

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K+ LG++  T +     +  + VF   + P++IY+S  +++YS VN +  S +C
Sbjct: 653  SLTGTNKLILGSEQPTFKKLPRGDGLYNVFTTCEHPSLIYASEGRIIYSAVNSEGASRVC 712

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FN+ A+PD++A+A   +L I  +D  +   I+++P+G   RR+ +    + F I ++K 
Sbjct: 713  HFNTEAYPDAIAVATSRDLKIALVDKERTTQIQTLPIGATVRRVAYSPTEKAFGIGTIKR 772

Query: 421  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY--------Y 470
              +  AE  E  FV L D+  F  + ++ L   E   S++        + Y        +
Sbjct: 773  RLEDGAEIVESQFV-LADEIMFRKLDSFDLKPDELVESVIRAQMVVGKDRYDEPIYKDRF 831

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGTAY+  E  E  +GRIL+F V+   KL L  E   KGA  +L      ++AA+ + +
Sbjct: 832  IVGTAYLDDETAESIRGRILLFEVDSNRKLSLFLEHPVKGACRALAMMGDYIVAALVKTV 891

Query: 530  QLYKWMLRDD-GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG--- 585
             +++   +   G   LQ    +      + +      IVV DLMKSIS++     +    
Sbjct: 892  VIFEVTGQPQTGKYSLQKAAVYRTSTAPVDIAVTDKTIVVADLMKSISIVESNKTDALTM 951

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
              +E AR +   W +AV  +  + +L ++   NL  +R+N +G T+E+R RLEV  E  L
Sbjct: 952  EAKEVARHFATVWTTAVADIGSNQWLVSDAEGNLIVLRRNVDGMTEEDRRRLEVTSELLL 1011

Query: 646  GEFVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            GE VNR R     + +P  S +   P    GTV G I + A +  E   FL +LQT +  
Sbjct: 1012 GEMVNRIRP----VNIPQTSTMAVTPKAFLGTVEGSIYLFALINPEHQDFLMRLQTAISA 1067

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNV-SVEE 762
             +   G +   ++R+F +  +  +    F+DG+LIE FLD  R   +EI   +    +E 
Sbjct: 1068 YVDSPGLMPFNKFRAFRSTVREAEEPFRFVDGELIERFLDCDRAVQEEILGVVGSGDLES 1127

Query: 763  LCKRVEELTRLH 774
            + K +E L RLH
Sbjct: 1128 VQKMIEALRRLH 1139


>gi|453081643|gb|EMF09692.1| DNA damage-binding protein 1 [Mycosphaerella populorum SO2202]
          Length = 1151

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 217/774 (28%), Positives = 392/774 (50%), Gaps = 47/774 (6%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EVL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+KDGSLR VR+G+G
Sbjct: 367  IEVLQTFSNIAPILDFTVMDMGNRSADAPVNEFSSGQARIVTGSGAFKDGSLRSVRSGVG 426

Query: 74   INEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE-ETEIEGF 130
            + ++ S+   G  I  ++SLRS         L+ SF+S +  +    + ++E   E  GF
Sbjct: 427  LEDKGSLGDLGEPISAVFSLRSGPGVQAVDTLIASFVSHSSAIIFGSDGDIEARDEFRGF 486

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
                 TL+  +    + VQVTS +V L  +    + + W++P G S+   +A+   VL++
Sbjct: 487  DLTQSTLYAGELPNGRAVQVTSSTVLLTDTEGDMITDRWEAPDGSSITSVSADGDHVLVS 546

Query: 191  TGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
             G   L+ L++    +T   H QL  E +ISCL +     + S      VG W D  V +
Sbjct: 547  LGSAALIVLDLSGSSITVGAHRQLGNEEQISCLSL-----SRSLPGACVVGFWKDSKVSV 601

Query: 249  FSLPDLNLITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGEL 303
             SL DL  I  E +  +    +PRS+++ +   +  + L   L DG+++ + +       
Sbjct: 602  LSLSDLQPIASESVAEDDNLAVPRSLIVASILRDQPATLFVGLADGNVVTYSVESLQRPF 661

Query: 304  TDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            + RK + LGTQ         S    +VFA  + P++IY S  +++YS V     + +C F
Sbjct: 662  SARKSIILGTQQANFTVLPRSDGLQNVFATCEHPSLIYGSEGRMVYSAVTADSATSICAF 721

Query: 363  NS-AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 421
            +S   + +S+AIA   EL + ++D+ +  H++ +P+ E  RRI +  + + F +  +K  
Sbjct: 722  DSFGDYANSIAIATGSELKLSSVDEERTTHVQDLPVYETVRRIAYSSELKAFGLGCIKRT 781

Query: 422  SCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV---YYCVGTAY 476
              A  EE   HF +L+D+  F+ + ++ L+  E   S++ C   D + +    + VGTAY
Sbjct: 782  LAAGVEEVRSHF-KLVDEVAFKALDSWALNEDELVESVIRCPLDDGTGLDAERFVVGTAY 840

Query: 477  VLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            +  ++    +GR+LVF + ED +++L+ E   KGA   L    G+++AA+ + + +  + 
Sbjct: 841  LDDQDANTARGRVLVFEVTEDRRIKLVTEMAVKGACRCLAVCKGRIVAALVKTVVILAYE 900

Query: 536  LR-DDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKH----EEGAIE 588
                  + +L  +  +      + ++  +    I + DLMKS++L+ Y      +  ++ 
Sbjct: 901  FSPPKSSPQLIKKASYRTSTAPIDIFASSLDGLIAISDLMKSLTLVKYTPGRTGQPDSLV 960

Query: 589  ERARDYNANWMSAV-EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
            E AR ++  W +AV  I     Y+ ++   NL  +  +  G + E+R RL V  E  LGE
Sbjct: 961  EIARHFDTLWGTAVAPIPGTHSYIQSDAEGNLVVLEHDPTGFSAEDRRRLRVTSEMCLGE 1020

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK 707
             VNR R  + V+  P ++   IP     TV G + V  ++  +    L +LQ ++ +++K
Sbjct: 1021 MVNRIRPITTVI-TPSANAVVIPKAFIATVEGSVYVFGTIAQQYQDLLIRLQGSMAEMVK 1079

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKN---FLDGDLIESFLDLSRTRMDEISKTMNV 758
              G +   ++R F  + + +  +    F+DG++IE FL LS    + ++K + V
Sbjct: 1080 SPGFVRFNRFRGFKTQVRDMGEEGPVRFVDGEIIEGFLGLSAEVQESVAKDLGV 1133


>gi|325094412|gb|EGC47722.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H88]
          Length = 1201

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 234/796 (29%), Positives = 398/796 (50%), Gaps = 50/796 (6%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRIV 68
            +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR V
Sbjct: 414  EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSV 472

Query: 69   RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE- 126
            R+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E+EE E 
Sbjct: 473  RSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEE 532

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              G      TL   +  + +++QVT  +VR+       +  EW      ++  A++N   
Sbjct: 533  FMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQQKAITAASSNDDH 592

Query: 187  VLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            V+L  GG  L+  +I GD  +T  K   ++ ++S + +     +P+ + I  +    ++ 
Sbjct: 593  VVLMVGGQVLMIFDISGDINITGEKDFGVDTQVSGVTVT---TSPARACILCLPQTAEVV 649

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V   SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N +  
Sbjct: 650  V--MSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNSEDF 707

Query: 302  ELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  + S +C
Sbjct: 708  SLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRIC 767

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K 
Sbjct: 768  HFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIKR 827

Query: 421  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-----DSNVY---Y 470
              +  AE     F+ L D+  F  +  Y L+  E   S++   F D      ++++   +
Sbjct: 828  TLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGNDLFKDLF 886

Query: 471  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + +
Sbjct: 887  VVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTV 946

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +Y           L     +      + +   G+ I V DLMKS+S++ Y+        
Sbjct: 947  VVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPD 1006

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV  E  L
Sbjct: 1007 SLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEILL 1066

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + +     ++    P    GTV G I +   +       L +LQ+ +  +
Sbjct: 1067 GEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAGM 1125

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNV 758
            +   GG+   ++R+F N  ++T +   F+DG+LIE FL+      +EI           V
Sbjct: 1126 VVTPGGMPFNKFRAFRNTIRQTEEPYRFVDGELIERFLNCGVELQEEIVGKVIADGVAGV 1185

Query: 759  SVEELCKRVEELTRLH 774
            +VE +   VEEL R+H
Sbjct: 1186 TVESVKGLVEELRRMH 1201


>gi|342318986|gb|EGU10938.1| DNA damage-binding protein 1b [Rhodotorula glutinis ATCC 204091]
          Length = 1102

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 230/779 (29%), Positives = 380/779 (48%), Gaps = 100/779 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            N+ PIVD C+V    Q     VTCSGAYK GSLR++R G+G++E A++E  G++  WSL 
Sbjct: 387  NIAPIVDLCIVSAHGQAANYAVTCSGAYKTGSLRVIRRGVGLSELAALEADGVQQAWSLT 446

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLED-------ELEETEIEGFCSQTQTLFCHDAIYN 145
            S      +  LV+ F SETR+  M+  D       +++E +++ F S   T+F  + + +
Sbjct: 447  SPAPST-EPILVLGFFSETRVFRMSAGDPAGAEAVQIDEMDLQLFASPGPTIFAGN-VGS 504

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKS-PPGYSVNVATANASQVLLATGGGHLVYLEIGDG 204
             LV+VT+ +V   S    E    WK+   G     A A    ++LA  GG L  L+  +G
Sbjct: 505  MLVRVTAEAVMYASDRGEE---SWKATSAGKITAAAAAGGDHLVLAFDGGFLQLLKAKNG 561

Query: 205  ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
              TE  +   E++I+ + +       S    A VG+WT  +V +  +PDL +   + +  
Sbjct: 562  TFTESGNIAFEHDIASVSL----AETSAGAFAVVGLWTSQAVHLVGIPDLAVYASQKITS 617

Query: 265  EIIPRSVLLCAF-EGISYLLCALGDGHLLNFLLNMKTGELTDR--KKVSLGTQPITLRTF 321
              + RS  L  F +G   L   LGDG L ++ +++    + D   K ++LG +P+ L   
Sbjct: 618  TFLIRSAALINFGDGDYTLFVGLGDGTLASYRVDLAAPAVIDSTGKMIALGRRPLLLSEI 677

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
              ++   + A SDRPTVI  +  +L YS+     VS +   +  A  D +A+     + I
Sbjct: 678  GPESAKVLLAVSDRPTVISKARDRLNYSS----GVSSVANISHPALGDLVALVSREGVQI 733

Query: 382  GTIDDIQKLHIRSIPLGE-HPRRICHQEQSRTFAI-CSLK--NQSCAEESEMHFVRLLDD 437
            G +D +QK+ +R++PL E  PRRI +   SR F + CS +  ++   +++    VRL+ +
Sbjct: 734  GRMDTVQKVDVRTVPLAEDEPRRIVYDPVSRKFCVACSRRDIDRHTGQQAVTSVVRLVSE 793

Query: 438  QTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG 497
             +FE  S + L+  E                                             
Sbjct: 794  DSFETSSVFELERGE--------------------------------------------- 808

Query: 498  KLQLIAEKETKGAV-YSLNAFNG-----KLLAAINQKIQLYKWMLRDDGTRELQSECGHH 551
            + Q +A  E++G V +S + F       K  A ++  + +  W +  +G   L+S     
Sbjct: 809  EAQSLALVESQGTVAWSSSPFQKLETCVKFRAPVSAAVAV--WTIDSEGALALKSTW--S 864

Query: 552  GHILALYVQTRG--DFIVVGDLMKSISLLIY-KHEEGAIEERARDYNANWMSAVEILDDD 608
            G  +A Y   R   D ++VGD ++S+++L Y    +  + E A+DY + +M  VE L  D
Sbjct: 865  GAFVA-YTLARAPDDTLIVGDALRSLTVLRYTASPQPKLLEVAKDYRSRYMVGVEDLGRD 923

Query: 609  I-----YLGAENNFNLFTVRKNSEGATD--EERGRLEVVGEYHLGEFVNRFRHGSLVMRL 661
                  Y+GAE + NLF V ++ + A         L+  G +HLGE V RFR GSL   +
Sbjct: 924  STGADRYIGAETDLNLFAVSRHPQQAAGNLANAATLQDAGAFHLGELVTRFRTGSLGDLI 983

Query: 662  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             D++   +P +++ T  G IGVIA L       L  L+ N+R+ +KGVGGL  E+  +  
Sbjct: 984  GDANTTVVPRLVYSTSAGTIGVIADLDAASSRILSDLERNMREFVKGVGGLEQEELVAGV 1043

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK------TMNVSVEELCKRVEELTRLH 774
             +K    +  F+DGD ++SFLDLS+   +++ +       + V   E+ + +EE+ R+H
Sbjct: 1044 ADKVKTPSTGFIDGDFVQSFLDLSKDVQEQVMQGKSEHERLTVDKAEIVRLLEEVARVH 1102


>gi|85107301|ref|XP_962347.1| hypothetical protein NCU06605 [Neurospora crassa OR74A]
 gi|28923951|gb|EAA33111.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1158

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 242/819 (29%), Positives = 413/819 (50%), Gaps = 70/819 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL +LNL  +     +++++   N+GP+ DF V+D+  +            GQ ++VT S
Sbjct: 356  QLYRLNLLSEDLSEILQLVQVLENIGPVTDFTVMDMGNRENDSQLGNEYSSGQARIVTAS 415

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDG+LR VR+G+G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   
Sbjct: 416  GVFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKF 474

Query: 117  NLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            +   E+EE +   G   Q QTL   +    QL+QVT+ +  L+ + S      W      
Sbjct: 475  DPHGEIEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDR 534

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYS 233
             +  A+AN   +LL+  G  LV + I D  LT V+   +  + +I+C+ + P       S
Sbjct: 535  QIINASANKHWLLLSVQGTTLVSINI-DNDLTVVQEKDISEQDQIACIHVAP-----QLS 588

Query: 234  QIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLCA 285
             +  VG WT  +V I  +  L  I  E L        IPR ++L        G++ L  A
Sbjct: 589  DVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDLVLAKVLPNAPGMT-LFIA 647

Query: 286  LGDGHLLNFLLNMKTGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYS 341
            + DG+++ F      GE    + RK V LGT+         ++  + +FA ++ P++IY 
Sbjct: 648  MEDGNVVTF----NIGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYG 703

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 401
            S  +++YS V  ++ + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE  
Sbjct: 704  SEGRIIYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMV 763

Query: 402  RRICHQEQSRTFAICSLKNQSCAEESEMH-FVRLLDDQTFEFIST-YPLDTFEYGCSILS 459
            RRI +    + F +  ++ +    E  +H   +L+D+  F  +   + L T  Y   +  
Sbjct: 764  RRIAYSPSEKGFGLGCIRREVVNGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVED 823

Query: 460  CSFSDDSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETKG 509
               ++  + Y      + VGT+++  P+    T  +GRILVF ++  +   L+ + E KG
Sbjct: 824  VIRAELPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKG 883

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               +L     K++AA+++ + + ++         L     +      + +   G+ I V 
Sbjct: 884  GCRALAVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIAVHGNMIAVA 943

Query: 570  DLMKSISLLIY--------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            D+MKS +L+ Y        K E   + E AR  ++ W +AV  ++ + +L A+ N NL  
Sbjct: 944  DMMKSATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLIV 1003

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 681
            +++N+EG T E++ +L +  E +LGE VN+ R    V   P++ +  IP     T  G I
Sbjct: 1004 LQRNAEGVTVEDQRQLRITSELNLGEQVNKIRPIK-VETSPNAII--IPRAFLATAEGGI 1060

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK------NFLDG 735
             +  ++  EQ L L + Q  L  VIK VG L+   +R+F N ++  +A        FLDG
Sbjct: 1061 YMFGTIAREQDLLL-RFQDKLAAVIKTVGELDFNSYRAFRNAERGPEADGTTGPVRFLDG 1119

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +L+E FLD+      EI + +  SVE++   VEEL R+H
Sbjct: 1120 ELLERFLDVDEKTQKEICEGLGPSVEQMRNMVEELRRMH 1158


>gi|336470789|gb|EGO58950.1| hypothetical protein NEUTE1DRAFT_145059 [Neurospora tetrasperma FGSC
            2508]
 gi|350291855|gb|EGZ73050.1| hypothetical protein NEUTE2DRAFT_156600 [Neurospora tetrasperma FGSC
            2509]
          Length = 1158

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 243/819 (29%), Positives = 413/819 (50%), Gaps = 70/819 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL +LNL  +     +++++   N+GPI DF V+D+  +            GQ ++VT S
Sbjct: 356  QLYRLNLLSEDLSEILQLVQVLENIGPITDFTVMDMGNRENDSQLGNEYSSGQARIVTAS 415

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDG+LR VR+G+G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   
Sbjct: 416  GVFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSPRVDT-LVASFLTDTRIFKF 474

Query: 117  NLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            +   E+EE +   G   Q QTL   +    QL+QVT+ +  L+ + S      W      
Sbjct: 475  DPHGEIEEVDNYYGMDLQHQTLLATNLDNGQLLQVTTAAATLLDAESGVTIASWAPEGDR 534

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIGENPSYS 233
             +  A+AN   +LL+  G  LV + I D  LT V+   +  + +I+C+ + P       S
Sbjct: 535  QIINASANKHWLLLSVQGTTLVSINI-DNDLTVVQEKDISEQDQIACIHVAP-----QLS 588

Query: 234  QIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLCA 285
             +  VG WT  +V I  +  L  I  E L        IPR ++L        G++ L  A
Sbjct: 589  DVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDLVLAKVLPNAPGMT-LFIA 647

Query: 286  LGDGHLLNFLLNMKTGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYS 341
            + DG+++ F      GE    + RK V LGT+         ++  + +FA ++ P++IY 
Sbjct: 648  MEDGNVVTF----NIGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIYG 703

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 401
            S  +++YS V  ++ + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE  
Sbjct: 704  SEGRIIYSAVTAEDATCVCPFDSEAFPGAVILSTENEIRISEIDTARQTHVRSLELGEMV 763

Query: 402  RRICHQEQSRTFAICSLKNQSCAEESEMH-FVRLLDDQTFEFIST-YPLDTFEYGCSILS 459
            RRI +    + F +  ++ +    E  +H   +L+D+  F  +   + L T  Y   +  
Sbjct: 764  RRIAYSPSEKGFGLGCIRREVVNGEEIIHSSFKLVDEILFARVGKEFMLGTSSYSELVED 823

Query: 460  CSFSDDSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETKG 509
               ++  + Y      + VGT+++  P+    T  +GRILVF ++  +   L+ + E KG
Sbjct: 824  VIRAELPDSYGNLVERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELKG 883

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               +L     K++AA+++ + + ++         L     +      + +   G+ I V 
Sbjct: 884  GCRALAVMGSKIVAALHKTVVISQYEETSSTEAHLVKLASYRCTTYPVDIAVHGNIIAVA 943

Query: 570  DLMKSISLLIY--------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
            D+MKS +L+ Y        K E   + E AR  ++ W +AV  ++ + +L A+ N NL  
Sbjct: 944  DMMKSATLVEYVPAKTGGEKSEAPKLVECARHRHSAWATAVAHVEGESWLEADANGNLIV 1003

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 681
            +++N+EG T E++ +L +  E +LGE VN+ R    V   P++ +  IP     T  G I
Sbjct: 1004 LQRNAEGVTVEDQRQLRITSELNLGEQVNKIRPIK-VETSPNAII--IPRAFLATAEGGI 1060

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK------NFLDG 735
             +  ++  EQ L L + Q  L  VIK VG L+   +R+F N ++  +A        FLDG
Sbjct: 1061 YMFGTIVREQDLLL-RFQDKLAAVIKTVGELDFNSYRAFRNAERGPEADGTTGPVRFLDG 1119

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +L+E FLD+      EI + +  SVE++   VEEL R+H
Sbjct: 1120 ELLERFLDVDEKTQKEICEGLGPSVEQMRNMVEELRRMH 1158


>gi|119471789|ref|XP_001258220.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
            181]
 gi|119406372|gb|EAW16323.1| UV-damaged DNA binding protein, putative [Neosartorya fischeri NRRL
            181]
          Length = 1140

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 232/786 (29%), Positives = 394/786 (50%), Gaps = 45/786 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 364  LEVVQTLSNIAPILDFTIMDLGNRSSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 423

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + +++ I  +W L+  +   F   L+V+F+ ETR+   + + E+EE +   G  
Sbjct: 424  MEELGVLGDMEHITDLWGLQVGSIGDFLDTLLVTFVDETRVFRFSSDGEVEEMDHFLGLS 483

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       +  EW  P    +  A+AN   ++L  
Sbjct: 484  LSESTLLATNLPGGRILQVTEQRVLIAEVEGGMVIYEWTPPNQLIITAASANDDSIVLVA 543

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L I + + +   K    + +IS + +     +P+   IA       +SV    
Sbjct: 544  GGELVTVLNITNEVQIVTQKDFGADSQISGVTVP---SSPTGVCIAGFPQLAKVSV--LK 598

Query: 251  LPDLNLI--TKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L DL+ +  T   L GE  PRSVL+     +    L  ++ DG ++ +  N     LT  
Sbjct: 599  LQDLSELHTTSVGLAGEAFPRSVLVANVLTDSPPTLFVSMADGSVITYSFNTDDYSLTGM 658

Query: 307  KKVSLGTQPITLRTFSSK-NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K+ LG++  T +         +VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 659  TKLILGSEQPTFKKLPRGIGLFNVFATCENPSMIYGSEGRIIYSAVNSEGASRICHFNSE 718

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
            A+P+S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I +++ +    
Sbjct: 719  AYPESIAVATSHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGIGTIERKLVDG 778

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------DDSNVYYCVGTA 475
            AE  +  FV L D+  F  +  + L   E   S++   F         D+    + VGTA
Sbjct: 779  AEIVKSRFV-LADEILFRRLDAFELRPEELVESVIRAEFPAGKGANDRDEVKDRFIVGTA 837

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E +E  +GRIL+F V++G KL  +AE   KGA  +L     K++AA+ + + +Y+ 
Sbjct: 838  YLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGDKIVAALVKTVVVYRV 897

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA----IEER 590
            +  + G   L+    +      + V   G+ I V DLMKS+ L+ YK  E      + E 
Sbjct: 898  INNNFGAMRLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSMCLVEYKEGENGTPDTMTEV 957

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV GE  LGE VN
Sbjct: 958  ARHFQTVWATGVANIAPDTFLESDAEGNLIVLHRNTTGVEEDDKRRLEVTGEISLGEMVN 1017

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P    GTV G I + A +  +   FL +LQ  +   ++ VG
Sbjct: 1018 RIRPVN-IQQL--ASVAVTPRAFLGTVEGSIYLFAIINPDHQDFLMRLQATIAGKVELVG 1074

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVEELCKRVE 768
             +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  T+  +SV+E+   +E
Sbjct: 1075 NMPLNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVSTVGKMSVDEVKGMIE 1134

Query: 769  ELTRLH 774
             L RLH
Sbjct: 1135 ALRRLH 1140


>gi|302894051|ref|XP_003045906.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256726833|gb|EEU40193.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1162

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 221/805 (27%), Positives = 399/805 (49%), Gaps = 57/805 (7%)

Query: 17   QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDGS 64
            Q D + + + +++   N  PI+DF ++D+  +            GQ ++V   GAY+DGS
Sbjct: 368  QIDPETNAMLLIKSLSNNAPILDFSIMDMGNREGDAQAGNAFSSGQSRIVAGCGAYQDGS 427

Query: 65   LRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            LR +R+G+G+ E+  + EL G +G+++LRS   D  DT LVVS I+ETRIL+ + +  +E
Sbjct: 428  LRSIRSGVGLEERGILDELDGTRGLFTLRSYNSDLVDT-LVVSSITETRILSFDTDGGIE 486

Query: 124  ET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E    +G    T+TL   +    QL+Q+T  SV L+   S    + W  P G S+  A+A
Sbjct: 487  EIYSFQGMEQDTETLLASNLPNGQLLQITPKSVVLLDPESGVAVSRWDVPTGKSITRASA 546

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIGENPSYSQIA 236
            N    LL+  G  LV L +   +   V+  Q E       +ISC  I+   + P    I 
Sbjct: 547  NTKWALLSVDGTSLVSLNLLQNLAVNVQQTQAEPGSQQPDQISC--IHAARDPP---DIG 601

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALGD 288
             VG W+   + +  +     +  E +        +PR + L            LL A+ D
Sbjct: 602  VVGWWSSGRISLIDMATFQPLHGESMRQTDDSATVPRDIALVQLHPPEISGPTLLVAMED 661

Query: 289  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLL 347
            G ++ F +++K   ++ RK V+LG+ P  L      + T+ VF  ++  ++IYSS  +++
Sbjct: 662  GTVVTFNVSIKGFAVSGRKSVTLGSNPARLHVLPQDDGTSSVFVTTEHASLIYSSEGRII 721

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
            +S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  RR+ + 
Sbjct: 722  FSATTADDATFVAPFDSHAFPDSIVLSTDSHIRICHVDKERLTHVKALPVHETVRRVAYS 781

Query: 408  EQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD- 465
               + F + S+K +    EE      RL+D+  F+ +    L        I+ C    + 
Sbjct: 782  PGLKAFGLGSIKKELVLNEEVVTSSFRLVDEIVFKELGEPFLLNASSTLEIVECVIRAEL 841

Query: 466  ----SNV--YYCVGTAYV---LPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLN 515
                 N+   + VGT+++     +E   T GRILV  V++ + +  I     KG    L 
Sbjct: 842  PDAGGNLTERFIVGTSFINDGQVQEANGTLGRILVLGVDEHRQVYQIVSHNLKGPCRCLG 901

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
              +  ++A +++ + +Y +      +  L+    +    L + +   G+ I VGDLM+S+
Sbjct: 902  MMDDYIVAGLSKTVVVYNYSQDTSSSGSLEKLAAYRPAALPVDLDISGNMIGVGDLMQSL 961

Query: 576  SLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            SL+ +       +  +EERAR Y   W +++  LD++ +L A++  NL  +++N++  T+
Sbjct: 962  SLVEFIPAQDGRKAKLEERARHYEPIWTTSLCHLDEERWLEADSQGNLIVLQRNADAPTE 1021

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHE 690
            ++R RLEV  E  +GE +NR R     + +P  D   + P     +  G + +   +  +
Sbjct: 1022 QDRSRLEVTSEIGIGEQINRIRK----LHVPAGDNSIVHPRAFLASAEGSLYLYGDIAPQ 1077

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRM 749
                L   Q+ + + I   G +  + WRSF NE +  D    F+DG+++E FLD+   + 
Sbjct: 1078 YQDLLMTFQSKMEEYIHAPGNIEFKLWRSFRNENRESDGPYRFIDGEMVERFLDMDEGKQ 1137

Query: 750  DEISKTMNVSVEELCKRVEELTRLH 774
            + + + +  SVE++   +EEL R+H
Sbjct: 1138 ELVCEGLGPSVEDMRNLIEELRRMH 1162


>gi|225558618|gb|EEH06902.1| DNA damage-binding protein 1a [Ajellomyces capsulatus G186AR]
          Length = 1201

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 235/796 (29%), Positives = 394/796 (49%), Gaps = 50/796 (6%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRIV 68
            +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR V
Sbjct: 414  EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSV 472

Query: 69   RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE- 126
            R+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E+EE E 
Sbjct: 473  RSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEE 532

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              G      TL   +  + +++QVT  +VR+       +  EW      ++  A++N   
Sbjct: 533  FMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQTKAITAASSNDDH 592

Query: 187  VLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            ++L  GG  L+  +I GD  +T  K   ++ ++S + +     +P+ + I  +    ++ 
Sbjct: 593  LVLMVGGQVLMIFDISGDINITGEKDFGVDTQVSGVTVT---TSPARACILCLPQTAEVV 649

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V   SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N +  
Sbjct: 650  V--MSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNSEDF 707

Query: 302  ELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  + S +C
Sbjct: 708  SLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRIC 767

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K 
Sbjct: 768  HFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIKR 827

Query: 421  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DS------NVYY 470
              +  AE     F+ L D+  F  +  Y L+  E   S++   F D  DS         +
Sbjct: 828  TLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIDSEGNDLFKDLF 886

Query: 471  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + +
Sbjct: 887  VVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTV 946

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +Y           L     +      + +   G+ I V DLMKS+S++ Y+        
Sbjct: 947  VVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVSIVEYQQGANGLPD 1006

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV  E  L
Sbjct: 1007 SLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEISL 1066

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + +     ++    P    GTV G I +   +       L +LQ+ +  +
Sbjct: 1067 GEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAGM 1125

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNV 758
            +   GG+   ++R+F N  ++  +   F+DG+LIE FL  S    +EI           V
Sbjct: 1126 VVTPGGMPFNKFRAFRNTIRQAEEPYRFVDGELIERFLGCSVELQEEIVGKVIADGVAGV 1185

Query: 759  SVEELCKRVEELTRLH 774
            +VE     VEEL R+H
Sbjct: 1186 TVESAKGLVEELRRMH 1201


>gi|402083318|gb|EJT78336.1| hypothetical protein GGTG_03437 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1155

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 223/813 (27%), Positives = 405/813 (49%), Gaps = 60/813 (7%)

Query: 10   QLIKLNL-QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTC 56
            +L+ LNL + D     VE ++   ++ PI+DF V+D+  +            GQ ++VT 
Sbjct: 355  ELLCLNLVREDTDRPLVETVQTLPSIAPILDFTVMDMGNREADNTVGNEYASGQARIVTG 414

Query: 57   SGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILA 115
            SGA++DGSLR VR+G+ +++   + ++ G++G++ L S+ +      LV SF++ETR+  
Sbjct: 415  SGAHRDGSLRSVRSGVRLDDIGILADMPGVRGLFPLESNGET---NALVASFLTETRVFT 471

Query: 116  MNLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPG 174
             + E ++EE E  +G     ++L   +   + ++Q+T     ++   +    + W+ P G
Sbjct: 472  FDAEGDIEEVEAFQGLDLSVRSLLVTNLGDDSILQITDHGASVIGPEAGITISSWEPPTG 531

Query: 175  YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 234
              +   + N   +LL+  G  LV L I D  ++  + +    +ISCL       +P    
Sbjct: 532  RVITGCSTNGKWLLLSIDGKTLVSLRIPDLTVSTQRESSPNDQISCL-----AASPHLPD 586

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGISYLLCAL 286
            I AVG W+D SV I +L  L++I  E L       I+PR ++L     A      L  ++
Sbjct: 587  IGAVGFWSDGSVSIINLCTLDVIHSETLRRTKDAAIVPRDIVLARVLPAEVAGPTLFVSM 646

Query: 287  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK-NTTHVFAASDRPTVIYSSNKK 345
             DG ++ F LN   G+L+ RK V LGT+           +  ++F  S+  ++IY S+K+
Sbjct: 647  DDGEVVTFTLN-DVGKLSARKSVVLGTRQARFHVLPQPGDVCNIFVTSEHSSLIYGSDKR 705

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            ++YS V  +  +++CPF++A FP SLA+A + EL I  ID  ++ H++S+P+GE+ R I 
Sbjct: 706  IIYSAVTAESATYVCPFDTAVFPGSLAVATDSELKISKIDPQRQSHVQSLPMGENVRSIA 765

Query: 406  HQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSILSCSFS 463
            +   +R F + C  +  S   E      RL+D+   + + + + L+  E   +++     
Sbjct: 766  YSAPTRVFGLGCIRREISKGVEKASSTFRLVDEVVLQPLGNPFELNEGEVVETVIRAQLR 825

Query: 464  DDSNVY---YCVGTAYVLPEENEP---TKGRILVFIVEDGKLQL-IAEKETKGAVYSLNA 516
            D        + VGT +++ E   P   +KGR+LVF V++ +    I     K     L  
Sbjct: 826  DTFGRLAERFIVGTRFLVDENLVPGSNSKGRVLVFGVDEERSPFQIVSHPLKSGCRRLAV 885

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
                ++ A+ + + + ++      + +L     +     A+ V   G  I VGD+MKS+S
Sbjct: 886  MEEMIVVALTKTVVVARYEELTSTSGKLIKVASYQTTSYAIDVAVEGRLIAVGDIMKSMS 945

Query: 577  LLIY--------------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            L+ +                +   + E  R Y ++W +AV   + + +L A+ + N+  +
Sbjct: 946  LVEFVPPTTVAGDGKAGETKKPAQLIEVCRHYQSSWSTAVAHFEGESWLEADADGNVMVL 1005

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
             +N+ G T E+R R+E+  E +LGE +NR +  S V   P++ +   P     T  G I 
Sbjct: 1006 GRNTTGVTLEDRRRMEITSEINLGENINRIQKIS-VETGPNAPIH--PKAFLSTTEGSIY 1062

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESF 741
            ++ ++  +    L  LQ  L   +  +G +  + +RSF N ++  D    F+DG+ IE F
Sbjct: 1063 LVGAIAPQMRDLLLNLQDRLEDYVGTLGNIPFKNFRSFRNAEREADGPVRFIDGEYIERF 1122

Query: 742  LDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            LD++     ++ + +  SVE++   VEEL  +H
Sbjct: 1123 LDMNEETQSQVCRDLGPSVEDMRNLVEELKNMH 1155


>gi|336263557|ref|XP_003346558.1| hypothetical protein SMAC_04731 [Sordaria macrospora k-hell]
 gi|380090453|emb|CCC11749.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1149

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 241/818 (29%), Positives = 408/818 (49%), Gaps = 72/818 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL +LNL  +     +++++   N+GPI DF ++D+  +            GQ ++VT S
Sbjct: 337  QLYRLNLLNEDLNEILQLVQVLENIGPITDFTIMDMGNRENDSQLGNEYSSGQARIVTAS 396

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G +KDG+LR VR+G+G+ + A + ELQ  + ++SL+S      DT LV SF+++TRI   
Sbjct: 397  GIFKDGTLRSVRSGVGLQDIAILGELQHTRALFSLQSYNSSRADT-LVASFLTDTRIFRF 455

Query: 117  NLEDELEETEIEGFCS---QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 173
            +   E+EE  +  +C    Q QTL   +    QL+QVT+ +  L+ + S      W    
Sbjct: 456  DPHGEIEE--VADYCGMDLQHQTLLTTNLDNGQLLQVTTAAATLLDAESGVTIASWAPEG 513

Query: 174  GYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSY 232
               +  A+AN   +LL+  G  LV + I  D  + + K    + +I+C+ + P       
Sbjct: 514  DRQIINASANKHWLLLSVQGTTLVSINIDNDLTVVQEKDVSEQDQIACIHVAP-----QL 568

Query: 233  SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAF----EGISYLLC 284
            S +  VG WT  +V I  +  L  I  E L        IPR ++L        G++ L  
Sbjct: 569  SDVGVVGFWTSGTVSIIDMSTLEPIHGESLRRSADDASIPRDIVLAKVLPNTPGMT-LFI 627

Query: 285  ALGDGHLLNFLLNMKTGE---LTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIY 340
            A+ DG+++ F      GE    + RK V LGT+         ++  + +FA ++ P++IY
Sbjct: 628  AMEDGNVVTF----NIGEDLTFSGRKSVILGTREARFHLLPQQDGIYSIFATTEHPSLIY 683

Query: 341  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 400
             S  +++YS V  ++ + +CPF+S AFP ++ ++ E E+ I  ID  ++ H+RS+ LGE 
Sbjct: 684  GSEGRIIYSAVTAEDATCVCPFDSEAFPGAVVLSTETEIKISEIDTARRTHVRSLELGEM 743

Query: 401  PRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFIST-YPLDTFEYGCSIL 458
             RRI +    + F + C  +     EE      +L+D+  F      + L T  Y   + 
Sbjct: 744  VRRIAYSPSEKGFGLGCIRREMVNGEEIIQSSFKLVDEILFARAGREFRLGTSSYSELVE 803

Query: 459  SCSFSDDSNVY------YCVGTAYVL-PEENEPT--KGRILVFIVEDGK-LQLIAEKETK 508
                ++  + Y      + VGT+++  P+    T  +GRILVF ++  +   L+ + E +
Sbjct: 804  DVIRAELPDSYGNLLERFIVGTSFLEDPDRGAGTDKRGRILVFGIDSNRDPYLVLKHELR 863

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
            GA  +L     K++AA+++ + + ++         L     +      + +   G+ I V
Sbjct: 864  GACRALAVMGSKIVAALHKTVVISQYEETSSTEARLVKLASYRCTTYPIDIAVHGNIIAV 923

Query: 569  GDLMKSISLLIY--------KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
             D+MKS +L+ Y        K+E   + E AR  ++ W +AV  ++ + +L A+ N NL 
Sbjct: 924  ADMMKSATLVEYVQAKTEEEKYEPAKLVECARHRHSAWATAVAHVEGESWLEADANGNLV 983

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
             +++N EG T E++ +L +  E +LGE VN+ R    V   P++ +  IP     T  G 
Sbjct: 984  VLQRNVEGVTAEDQRQLRITSELNLGEQVNKIRPIK-VETSPNTII--IPRAFLATAEGG 1040

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK------TVDAKNFLD 734
            I +  ++  EQ L L + Q  L  VIK VG L+   +R+F N ++      T     FLD
Sbjct: 1041 IYLFGTIAREQDLLL-RFQDKLAAVIKTVGELDFNSYRAFRNAERGPETDGTTGPVRFLD 1099

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            G+L+E FLD+  T   EI + +  SVE++   VEEL R
Sbjct: 1100 GELLERFLDVDETTQKEICEGLGPSVEQMRNMVEELRR 1137


>gi|403415203|emb|CCM01903.1| predicted protein [Fibroporia radiculosa]
          Length = 1267

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 248/842 (29%), Positives = 401/842 (47%), Gaps = 105/842 (12%)

Query: 20   AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS 79
             KG +VEVL+ Y N+ PI+D  +VDL+  GQ Q++ CSG    G+L+I+R G    EQA 
Sbjct: 444  GKGKFVEVLDSYENIAPIMDAVMVDLDGSGQPQIIACSGGRNSGALKIIRTGADFQEQAV 503

Query: 80   VE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI--EGFCSQTQT 136
            +  ++ +  +W +RS  +D  D+ L+ + + ET + +++  + +   +    GF +++ T
Sbjct: 504  IRGIENVTDIWPIRSHYEDIIDSHLIATTLHETLVFSLDGRNAVTHMDPSDHGFITRSPT 563

Query: 137  L----------------FCHDAIYNQLV-QVTSGSVRLVSSTSR-----ELRNEWKSPP- 173
            L                     + + LV QV+   VR++   +       + + W +   
Sbjct: 564  LAVGNIPRRATTQNGGRVVSSYVDSSLVLQVSQEKVRVIEHDAALGLFVPVGDGWDATKE 623

Query: 174  GYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQL------EYEISCLDINPI 226
            G ++  A  N+SQ +L   GG L+ L +G+   + E+K+           EIS +  +P 
Sbjct: 624  GRTIVAAAINSSQFVLGLSGGRLILLNLGENEQIQELKYRDFGDRTYGMLEISAVSCSPF 683

Query: 227  GENPSYSQIAAVGMWTDISVRIFSLPD----LNLITK-------------EHLGGEIIPR 269
                 Y+    V  W    + I SL      L  I +              + G +  P+
Sbjct: 684  DTTKKYATCIGVSFWGTNRIAILSLESATSYLTTICESDPLPSLPRSLLLHNFGQDHNPK 743

Query: 270  SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 329
                   +   ++L  L DG L++F    K  +L D+K  +LG  P+ L   +      +
Sbjct: 744  GA-----DYHPHVLAGLVDGTLVSFSFREK--DLKDKKTFALGDVPVALAKSTVDGKPAI 796

Query: 330  FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 389
            FA+  R +V+Y   ++L  S V +K+       +S+AFP  L +A    L IG +  + K
Sbjct: 797  FASGSRASVLYWDRQRLHQSPVMIKDAVRGASISSSAFPSCLILATRSTLMIGNVRGVDK 856

Query: 390  LHIRSIPLG-EHPRRICHQEQSRTFAICSLK---NQSCAEESEMHFVRLLDDQTFEFIST 445
            + I S+ +G ++PRRI H    R FA+  ++   N+    +     ++LLDD TF  I++
Sbjct: 857  MQINSVRMGLDNPRRIAHHPTLRVFAVACIQTKPNRIGEPQETTSSLKLLDDTTFNRIAS 916

Query: 446  YPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG---KLQLI 502
            +  ++ E   S+L+ S SD S+  +CVGT    P E EP+ GRIL+F +  G     QL+
Sbjct: 917  FACESDEEVTSVLTLSSSDVSSARFCVGTVQFKPGETEPSSGRILLFSLNTGPESSFQLV 976

Query: 503  AEKETKGAVYSLNAFNGKLLAAIN------------------QKIQLYKWMLRDDGTREL 544
            +     G VY L +  G + AA+N                   K+ L+K    ++ T  L
Sbjct: 977  SSTPVSGCVYQLVSIQGMIAAAVNTSVRTAYVFIAFDPNMTIHKVILFKPEKLNNSTVVL 1036

Query: 545  Q--SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
               SE  H+  +  L V   G  ++VGD + SIS +  K ++  +E  ARDY+  W  +V
Sbjct: 1037 TKVSEWNHNYSVTGLVVH--GCMLIVGDAISSISFV--KVDDTTLESIARDYSPLWPVSV 1092

Query: 603  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 662
            E +D D  +GA ++ NLFT      G     R  LE  G Y+LG+ VN+F  GSL   + 
Sbjct: 1093 EAMDGDGVIGANSDCNLFTFALQRSG----HRSTLERNGSYYLGDMVNKFLRGSLT-NID 1147

Query: 663  DSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S+   I P  +F T  G IGVI  +  +  L +  LQ N+ K I G GG++H  +R+  
Sbjct: 1148 ISERKSIEPKHLFFTSTGRIGVILEMNDKISLHMTGLQRNMGKRIIGPGGVHHATFRAPA 1207

Query: 722  NEKKTVDAK---NFLDGDLIESFL------DLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            N K   DA+    FLDGD +E +L      DL +  MD    TM+ S  ++   +E+L  
Sbjct: 1208 NSKGHSDAEAAFGFLDGDFLEQYLGYADYTDLLQGDMDAEQVTMSHS--QIQDVLEQLQS 1265

Query: 773  LH 774
            LH
Sbjct: 1266 LH 1267


>gi|340521192|gb|EGR51427.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1161

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 222/806 (27%), Positives = 402/806 (49%), Gaps = 58/806 (7%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDG 63
            L+ D +   + +L+   N  PI+DF ++DL  +            GQ ++V   GAY+DG
Sbjct: 367  LRIDIETQQMTLLKVLPNNAPIMDFTIMDLGNREGDAQAGNTFSSGQARIVAGCGAYQDG 426

Query: 64   SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR +R+G+G+ ++  + E  G +G+++LRS   +  DT +VVS ++ TR+L    E   
Sbjct: 427  SLRSIRSGVGLEDRGLLDEFPGTRGLFTLRSVDSEKVDT-VVVSTLAGTRVLRFEPESIE 485

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E    +G   +++TL   +    QL+Q+T   V L+   S      W+SP G  +  A+A
Sbjct: 486  EVYSFQGMDLESETLLAANLPNGQLLQITPRVVTLLDPESGASLCSWQSPDGKVITAASA 545

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQ------LEYEISCLDINPIGENPSYSQIA 236
            N    LL+  G  LV L + DG+   V+ A          +ISC  I+   + P +    
Sbjct: 546  NTKWALLSIDGSLLVSLNLLDGLKAVVQDASENPVSGQPDQISC--IHAARDPPDF---G 600

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALGD 288
             VG W   ++ +  L  L  +  E L        +PR V L            LL AL D
Sbjct: 601  VVGWWASGTISVVDLATLTPLHGESLRQTDDSASVPRDVALVQLHPPDMSGPTLLVALED 660

Query: 289  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLL 347
            G++++F +++K   ++ RK V+LG+ P  L      +   +VFA ++  ++IYSS  +++
Sbjct: 661  GNVISFNVSLKGFSISGRKTVTLGSGPARLHVLPRPDGICNVFATTEHASLIYSSEGRIV 720

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
            YS     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++S+P+ E  RR+ + 
Sbjct: 721  YSATTADDATFVAPFDSEAFPDSIVLSTDEHIRICHVDSERLTHVKSLPMHETVRRVAYS 780

Query: 408  EQSRTFAICSLKNQSCA-EESEMHFVRLLDD-------QTFEFISTYPLDTFEYGCSILS 459
               + F +  +K +    EE     VRL+D+       Q FE  ++  L+  E  C I +
Sbjct: 781  PGLKAFGLGCIKKELVENEEVVTSTVRLVDEIIFQELGQPFELNASASLELVE--CVIRA 838

Query: 460  CSFSDDSNV--YYCVGTAYVL---PEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYS 513
                 + N+   + VGT++V     +E   T+GRI+V  V++ + L  IA    KG    
Sbjct: 839  ELPDSNGNMTERFLVGTSFVADPGTDEAGETRGRIVVLGVDESRQLYQIASHNLKGVCRC 898

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L   +  ++A +++ + +Y +         L     +      + +   G+ I VGDLM+
Sbjct: 899  LAMLDDYIVAGLSKTVVVYSYAQETSTAASLTKVASYRPASFPVDLDVSGNMIGVGDLMQ 958

Query: 574  SISLLIYKHEE----GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            S++L+ +   +      +EE+AR Y   W ++V  LD+  +L A+   N+  +R+  E  
Sbjct: 959  SLTLIEFTPPQDGKMAKLEEKARHYQQAWTTSVCALDETRWLEADAQGNVIVLRQRQEAP 1018

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            T+++R +LE+  E ++GE +NR R   +    P  +   +P    G++ G + +   +  
Sbjct: 1019 TEQDRSQLEITSELNIGEQINRIRKLQVA---PGENAVVVPKAFLGSIEGTLYLYGDIAP 1075

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTR 748
            +    L   Q+ L+  I+  G L+ + WR+F N+ +  ++   F+DG++IE FLDL  ++
Sbjct: 1076 KYQDLLMTFQSRLQGYIQTPGNLSFDLWRAFRNQAREGESPYRFVDGEMIERFLDLDESQ 1135

Query: 749  MDEISKTMNVSVEELCKRVEELTRLH 774
             + + + +  +VE++   +EEL R+H
Sbjct: 1136 QELVCEGLGPNVEDMRNLIEELRRMH 1161


>gi|358400469|gb|EHK49795.1| hypothetical protein TRIATDRAFT_146031 [Trichoderma atroviride IMI
            206040]
          Length = 1161

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 216/804 (26%), Positives = 401/804 (49%), Gaps = 54/804 (6%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDG 63
            L  D +   + +++   N  PI+DF ++DL  +            GQ ++V  SGAY+DG
Sbjct: 367  LHVDIESQQMTLIKVISNNAPIMDFTIMDLGNREGDAQSGNTFSSGQARIVAGSGAYQDG 426

Query: 64   SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR +R+G+G+ ++  + E++G +G+++LRS      DT +V+S ++ TR+L    ++  
Sbjct: 427  SLRSIRSGVGLEDRGLLDEIEGTRGLFTLRSVDSAKADT-VVISTLAGTRVLRFEPDNIE 485

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E    +G   ++ TL   +    Q++Q+T  +V L+   S    + W++P G ++  A+A
Sbjct: 486  ELFSFQGMDLESPTLLAANLPSGQILQITPQAVNLLDPDSGVSVSSWQAPEGKTITAASA 545

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIGENPSYSQIA 236
            N    LL+  G  LV L + D +    K A  +       +ISC+       +P      
Sbjct: 546  NTKWALLSVDGSILVSLNLLDNLKATTKDASQDSVSGRPDQISCIHA---ARDPQ--DFG 600

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGI----SYLLCALGD 288
             +G WT  ++ +  +  L  +  E L        +PR V L            +L AL D
Sbjct: 601  VIGWWTSGTISVVDMATLTPLHGEPLRQTDDSASVPRDVALVQLHPPESSGPTMLVALED 660

Query: 289  GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLL 347
            G++++F +++K   ++ RK V+LG+ P  L     ++   +VFA ++  ++IYSS  +++
Sbjct: 661  GNVISFNVSVKGFAISGRKTVTLGSGPARLHVLPREDGICNVFATTEHASLIYSSQGRIV 720

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQ 407
            YS     + + + PF+S AFPDS+ ++ E  + I  +D+ +  H++++P+ E  RR+ + 
Sbjct: 721  YSATTAADATFVAPFDSEAFPDSIVLSTEDHIRICHVDNERLTHVKALPMYETVRRVAYS 780

Query: 408  EQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--- 463
               R F + C  K     EE     V+L+D+  F+ + T  L        ++ C      
Sbjct: 781  PGLRAFGLGCIKKELVNNEEVITSTVKLVDEIIFQELGTPFLLNASSSLELVECVIRAEL 840

Query: 464  DDSN----VYYCVGTAYVLPE---ENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLN 515
             D+N      + VGT++V  +   E+  TKGRILV  V++ + L  I     KG    L 
Sbjct: 841  PDANGNLAERFLVGTSFVADQGTAESGETKGRILVLGVDESRQLYQITSHSLKGVCRCLV 900

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
              N  ++A + + +  Y +      +  L            + +   G+ I +GDLM+S+
Sbjct: 901  MMNNYIVAGLTKTVVAYSYNQDTSTSASLTKLASFRPASFPVDLDVSGNIIGIGDLMQSL 960

Query: 576  SLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            +L+ +      ++  +EE+AR Y   W +++  LDD  +L A+   N+  +R+N E  T+
Sbjct: 961  TLVEFTPPQDGKKAKLEEKARHYQQAWTTSISALDDSRWLEADAQGNVIVLRQNLEAPTE 1020

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 691
            +++ +L+V+ E ++GE +NR R   +    P  +   +P    G+  G + +   +  + 
Sbjct: 1021 QDQSQLQVISELNIGEQINRIRKLQVA---PGENAIVVPKAFLGSTEGTLYLYGDIAPKY 1077

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMD 750
               L   Q+ L++ I   G L+ + WR+F N+ +  +A   F+DG++IE FLDL   + +
Sbjct: 1078 QDLLMTFQSRLQEYISTPGNLSFDLWRAFRNQSREGEAPFRFVDGEMIERFLDLDEGKQE 1137

Query: 751  EISKTMNVSVEELCKRVEELTRLH 774
             + + +  SVE++   +EEL R+H
Sbjct: 1138 LVCEGLGPSVEDMRNLIEELRRMH 1161


>gi|358366432|dbj|GAA83053.1| UV-damaged DNA binding protein [Aspergillus kawachii IFO 4308]
          Length = 1643

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 228/775 (29%), Positives = 392/775 (50%), Gaps = 44/775 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 304  LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 363

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+EE +   G  
Sbjct: 364  MEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLS 423

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       + NEW  P    +  A+AN   ++L +
Sbjct: 424  LSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDRLVITSASANNDSIVLVS 483

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  L  L+I + + +   K    + +IS + + P+    S + +  VG      V +  
Sbjct: 484  GGQILTVLDINNDVRVVAQKDFGADSQISGVTV-PL----SSAGVCIVGFPQLAKVSVLD 538

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  +     LT  
Sbjct: 539  LGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYAFDASDYSLTGM 598

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 599  NRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSE 658

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--KNQSC 423
            A+P S+A+A + +L I  +D  +   I+++P+GE  RR+ +    + F I ++  K +  
Sbjct: 659  AYPGSIAVATKHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGIGTIERKLKDG 718

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNVY---YCVGTA 475
            AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V+   + VGTA
Sbjct: 719  AEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTA 777

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA+ + + +Y  
Sbjct: 778  YLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGV 837

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEER 590
            +  D G  +L+    +      + V   G+ I + DLMKS+ L+ Y   E     ++ E 
Sbjct: 838  VNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAIADLMKSVCLVEYSEGENGMPDSLTEV 897

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV GE  LGE VN
Sbjct: 898  ARHFQTVWATGVVCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISLGEMVN 957

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   ++ +G
Sbjct: 958  RIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGKVESLG 1014

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
             +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++ +  +  C
Sbjct: 1015 NIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMMNKGSC 1069


>gi|134077422|emb|CAK45676.1| unnamed protein product [Aspergillus niger]
          Length = 1133

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 230/785 (29%), Positives = 396/785 (50%), Gaps = 54/785 (6%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            +EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 348  LEVIQTLSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 407

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + E++ I  ++ L+ +T   +   L+V+F+ ETR+   N + E+EE +   G  
Sbjct: 408  MEELGVLGEMELITDLFGLQLATKGGYLDTLLVTFVDETRVFQFNFDGEVEELDSFLGLS 467

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       + NEW  P    +  A+AN   ++L +
Sbjct: 468  LSENTLLAMNLPGGRILQVTEQRVLIADIEGGMVTNEWTPPDNLVITSASANNDSIVLVS 527

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L+I + + +   K    + +IS + + P+    S + +  VG      V +  
Sbjct: 528  GGQLMTVLDINNDVRVISQKDFGADSQISGVTV-PL----SSAGVCIVGFPQLAKVSVLD 582

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L  L+ +    LG  GE  PRSVL+        S L  ++ DG ++ +  + +   LT  
Sbjct: 583  LGRLSELHTTSLGPAGEAFPRSVLVADVLANSPSTLFISMADGSVITYSFDARNYSLTGM 642

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             ++ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C FNS 
Sbjct: 643  NRLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVCHFNSE 702

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--KNQSC 423
            A+P S+A+A   +L I  +D  +   I+++P+GE  RR+ +    + F I ++  K +  
Sbjct: 703  AYPGSIAVATRHDLKIALVDKERTTQIQTLPMGETARRVAYSPSEKAFGIGTIERKLKDG 762

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-----DDSNVY---YCVGTA 475
            AE  +  FV L D+  F  +  + L   E   S++   FS     +  +V+   + VGTA
Sbjct: 763  AEMVQSRFV-LADEIMFRRLDAFDLRPEELVESVIRAEFSAGKDENGRDVFKDRFVVGTA 821

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            Y+  E  E  +GRILVF +++G KL  +AE   KGA  +L     K++AA+ + + +Y  
Sbjct: 822  YLDDENEESIRGRILVFEIDNGRKLTKVAELPVKGACRALAMLGEKIVAALVKTVVIYGV 881

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEER 590
            +  D G  +L+    +      + V   G+ I V DLMKS+ L+ Y   E     ++ E 
Sbjct: 882  VNNDFGAMKLEKLASYRTSTAPVDVTVTGNVIAVADLMKSVCLVEYSEGENGSPDSLTEV 941

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L  +   NL  +R+N  G  ++++ RLEV GE  LGE VN
Sbjct: 942  ARHFQTVWATGVSCIAKDTFLETDAEGNLIVLRRNLTGVEEDDKRRLEVTGEISLGEMVN 1001

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R           ++ Q+ +V   TV G I + A +  E   FL +LQ  +   ++ +G
Sbjct: 1002 RIRP---------VNIQQLASV---TVEGSIYLFAIINPEHQDFLMRLQATMAGKVESLG 1049

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVE 768
             +   ++R F +  ++  +   F+DG+LIE FL    +  +EI  ++  ++V+E  +   
Sbjct: 1050 NIPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSLQEEIVDSVGMMNVDERIRPTV 1109

Query: 769  ELTRL 773
             LT L
Sbjct: 1110 YLTSL 1114


>gi|449488592|ref|XP_004158102.1| PREDICTED: LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
           [Cucumis sativus]
          Length = 570

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 162/179 (90%), Positives = 171/179 (95%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+QPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR+VR
Sbjct: 324 QLVKLNVQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRVVR 383

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG
Sbjct: 384 NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 443

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
           F SQ QTLFCHDA++NQLVQVTS SVRLVSST+REL NEW +P  YS+NVATANASQ +
Sbjct: 444 FNSQVQTLFCHDALFNQLVQVTSSSVRLVSSTTRELLNEWNAPSNYSINVATANASQCI 502


>gi|452979181|gb|EME78944.1| hypothetical protein MYCFIDRAFT_43692 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1149

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 228/795 (28%), Positives = 390/795 (49%), Gaps = 55/795 (6%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQ-----------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            ++VL+ + N+ PI+DF V+D+  +           GQ ++VT SGA+ DGSLR VR+G+G
Sbjct: 365  IDVLQSFPNIAPILDFTVMDMGNRSLDAPVNEFSSGQARIVTGSGAFNDGSLRSVRSGVG 424

Query: 74   INEQASVELQG--IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGF 130
            + ++ S+   G  I  ++SLR+S    +   L+VS +S T ++    + ++E  +   GF
Sbjct: 425  LEDRGSLGDLGAPISSIFSLRTSAAAQYVDTLIVSHVSHTNVVVFTEDGDIEARDSFRGF 484

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
              +  TLF  D    + VQVTS SV L  S    + + W++P G S+    A+  ++L++
Sbjct: 485  ELKDATLFAGDLRDGRAVQVTSSSVLLTDSEGDMVTDRWQAPSGTSITAVAADGEKILVS 544

Query: 191  TGGGHLVYLEIGDG---ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
              G  LV L++      +  E K    E ++SC     I  +PS       G W D  V 
Sbjct: 545  LQGAVLVVLDLSASNIQVQAERKFGS-EEQVSC-----IALSPSIPNACVAGFWKDSKVS 598

Query: 248  IFSLPDLNLITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGE 302
              SL DL     E +  E    +PRS+++     +  + L   L DG+++ + +      
Sbjct: 599  FLSLQDLQPTASERVAEEESLAVPRSLIVANILKDQPATLFVGLADGNVVTYSVTSAQQP 658

Query: 303  LTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 361
             + RK + LGTQ         +    +VFA  + P++IY S+ +L+YS V  +  + +  
Sbjct: 659  FSARKCIILGTQQANFAALPRADGLQNVFATCEHPSLIYGSDGRLVYSAVTAENATCIAS 718

Query: 362  FNS-AAFPDSLAIAK-----EGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI 415
            F+S   +  ++AIA      E EL +  +D+ +  H++ + + E  RRI +  + + F +
Sbjct: 719  FDSFGDYAGAIAIATTDENGENELKLAVVDEERTTHVQDLFIHETVRRIAYSAELKAFGL 778

Query: 416  CSLKNQSCA--EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN---VYY 470
              +K    A  EE   HF +L+D+  F+ + T+ L+  E    ++ C   D S      +
Sbjct: 779  GCIKRTLSAGNEEVASHF-KLVDEVAFKELDTWALNEDELVECVIRCYLDDGSGEEAERF 837

Query: 471  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGTAY+  ++    KGRILV  I ED +++L+ E   +GA   L    G+++AA+ + I
Sbjct: 838  VVGTAYLDDQDANNAKGRILVLEITEDRRIKLVTELAVRGACRCLAVCQGRIVAALVKTI 897

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH----EEG 585
             +Y +  +   T  L  +  +      + +    + I V DLMKS+SLL +K     +  
Sbjct: 898  VVYDFEYQTPSTPALTKKASYRTATAPIDICVTNNTIAVTDLMKSLSLLEFKAGRQGQPD 957

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
             + E AR +   W +A   + ++ YL ++   NL  ++ +  G + E+R RL V  E+ L
Sbjct: 958  TLIEIARHFETLWGTACARVSENTYLESDAEGNLIVLQHDINGFSQEDRRRLRVTSEFLL 1017

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R    +   P       P     T +G I V   +   +   L ++QT +  +
Sbjct: 1018 GEMVNRIRP---ITVQPSPGAVVTPQAFLATTDGSIYVYCEIGKPRQDLLMRMQTLMADM 1074

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGDLIESFLDLSRTRMDEISKTMN---VS 759
            +K  GG+   ++R F    + +  +    F+DG+LIE FLD+     +E+ K ++   V 
Sbjct: 1075 VKSPGGVRFAKFRGFKTLVRDMGEEGPVRFVDGELIERFLDMPEVLQNEVVKGLDGTGVD 1134

Query: 760  VEELCKRVEELTRLH 774
            +E L   VE L R+H
Sbjct: 1135 LEGLRGMVEGLRRIH 1149


>gi|303313681|ref|XP_003066852.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|240106514|gb|EER24707.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|320031496|gb|EFW13458.1| UV-damaged DNA binding protein [Coccidioides posadasii str. Silveira]
          Length = 1144

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 230/796 (28%), Positives = 401/796 (50%), Gaps = 54/796 (6%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGAYKDGSLRIVRN 70
            +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA++DGSLR VR+
Sbjct: 361  EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRS 419

Query: 71   GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IE 128
            G+G+ +   +  ++ I  +W + +   + F   L++SF+ E+R+   + + E+EE +   
Sbjct: 420  GVGMEDLGVLGAMEHITDLWGVSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFL 479

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            G      T+   +    +++QVT    R+    SR    EW +     +  A++N   ++
Sbjct: 480  GLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLV 539

Query: 189  LATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQIAAVGMWTDIS 245
            L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q   +       
Sbjct: 540  LMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------QACILCFPQSAE 592

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGHLLNFLLNMKTG 301
            V I  L DLN+   E LG  G+ +PRSVL+ C F +    L  A+ DG + +F LN+   
Sbjct: 593  VTIIDLTDLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGSVFSFSLNVANY 652

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS VN  + + +C
Sbjct: 653  SLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYSAVNSDKATRIC 712

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FN+ A+P ++A+A   EL I  +D  +   I+++ + E  RR  +    R F + +++ 
Sbjct: 713  HFNAEAYPGAIAVATPDELKIALVDAERTTQIQTLMINETVRRTSYSSTERAFGLGTIQR 772

Query: 421  Q--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSFSDDSNV-------YY 470
                  EE + HF+ L D+  F  +S + L+  E   C I +     ++ +        +
Sbjct: 773  TLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNELVECVIRTEHPGSNAQMGSSRPRDIF 831

Query: 471  CVGTAYV-LPEENEP-TKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VGT+ +  PEE E  TKGRIL+F V+  + L+ I +   +GA  +L   N K++AA+ +
Sbjct: 832  IVGTSVLDTPEEAEARTKGRILIFDVDTNRELRKICDFPVRGACRALAMINNKIVAALMK 891

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA- 586
             + +      +    E++ E  +      + +   G+ I V DLMKSISL+ Y   EG  
Sbjct: 892  TVVVLNIKKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQ 951

Query: 587  ---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
               ++E AR Y   W +A   + ++ +L A+   NL  + +N+ G T+++R R++V  E 
Sbjct: 952  PDTLKEVARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRNTTGVTEDDRRRMQVTSEL 1011

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
             LGE VNR  H   +   P+S V  IP     TV+G I +   +       L +LQ+ L 
Sbjct: 1012 RLGEMVNRI-HPMDLQTSPESPV--IPKAFLATVDGSIYLFGLISPSAQDTLMRLQSALA 1068

Query: 704  KVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFL----DLSRTRMDEISKTMNV 758
              +   G +   ++R+F +  +  +    F+DG+LIE FL    D+    +  +     V
Sbjct: 1069 DFVASPGEIPFNKYRAFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEAVLARMDGGGRV 1128

Query: 759  SVEELCKRVEELTRLH 774
            +V E+   +E L R+H
Sbjct: 1129 NVIEIKDMIEGLKRMH 1144


>gi|156049323|ref|XP_001590628.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980]
 gi|154692767|gb|EDN92505.1| hypothetical protein SS1G_08368 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1153

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 245/825 (29%), Positives = 416/825 (50%), Gaps = 72/825 (8%)

Query: 4    FYVLP----KQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL---ERQ-------- 48
            FYV       Q+I+++L   +    V VL+   N+ PI+DF ++D+   E Q        
Sbjct: 345  FYVASHEADNQVIQIDL--GSPNYSVTVLQVLPNIAPILDFTIMDMGGREGQTQLNEYSS 402

Query: 49   GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSF 107
            GQ ++VT SG ++ GSLR VR+G+G+++ A + E++GI  +++L S    P DT LVVSF
Sbjct: 403  GQARLVTGSGGFEGGSLRSVRSGVGLDDIAILAEMEGIHKVFALHSGPSLPNDT-LVVSF 461

Query: 108  ISETRILAMNLEDELEETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR 166
             +ETR    +   ++EE   I    + ++TL  ++     ++QVT   V +     +   
Sbjct: 462  STETRFFKFDSLGDIEEVNTISNLSAASETLLTYNLDNGCILQVTQHEVAI---HGKSPG 518

Query: 167  NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINP 225
            + W+ P G  +  A+ N + +LL++ G  LV L I    L EV   +L + +++C+ +  
Sbjct: 519  HRWQPPDGQIITAASGNQNYILLSSNGRTLVTLSIEQN-LAEVAFQELGDDQVACIHVPQ 577

Query: 226  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL---GGEIIPR-----SVLLCAFE 277
            +        I  +G+W   S+ +  L  L  I  E L    G  IPR      +LL    
Sbjct: 578  L-----LGDIGVIGLWKSGSISLLDLKTLKTIVSEDLRRNDGASIPRDIALTQILLPELS 632

Query: 278  GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRP 336
            G + L  ++ DG +L+F ++ +   L+ RK + LGTQ   L+     NTT +VFA  + P
Sbjct: 633  GPT-LFVSMEDGIVLSFDVDSENCSLSGRKSIVLGTQQARLQILPRDNTTFNVFATCEHP 691

Query: 337  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 396
            ++IY S  + +YS V  ++   +C FNS A+PDS+ +A   EL +  ID+ ++ H+R++P
Sbjct: 692  SLIYGSEGRTVYSAVTAEDAITVCSFNSRAYPDSVVVATTNELKLSAIDNERRTHVRTLP 751

Query: 397  LGEHPRRICHQEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFIST--YPLDTFEY 453
            +GE  RRI +  + R FAI ++K + +  +E      RL+D+  F  +    Y     E 
Sbjct: 752  IGETVRRIAYSAKERAFAIGAIKRELTKGQEIVTTSFRLVDEVVFGELGEPFYLPANDEI 811

Query: 454  GCSI----LSCSFSDDSNV-YYCVGTAYVLPEENEPTKGRILVFIV-EDGKLQLIAEKET 507
              S+    L   + D   V  + VGT++ L +     +GR+L+F V  D    +IA    
Sbjct: 812  IESVIRAELPTKYGDGELVERFLVGTSF-LHDGEVNIRGRLLIFGVNSDRTPYIIASHTL 870

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
            KG+   +   NGK++AA+N+ + +Y +      T  L+    +      + +  RG+ I 
Sbjct: 871  KGSCRCIGVLNGKIVAALNKTVVMYDYEETSRTTANLRKVATYRCATCPIDIDIRGNIIA 930

Query: 568  VGDLMKSISLLIYKHE----EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 623
            V D+MKS++L+ Y          +EE  R     + +++  +D D YL ++++ NL  ++
Sbjct: 931  VADIMKSVALVEYTPGVDGLPDKLEEVGRHAQQVFATSIAEVDTDTYLESDHDGNLIVLK 990

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 683
            +N EG T E++ RLEV+ E +LGE VN+ +  ++       D   IP     T  G I +
Sbjct: 991  RNREGVTREDKLRLEVLCEMNLGEMVNKIKRINVET---SKDALLIPRAFVATTEGSIYL 1047

Query: 684  IASLPHEQYLFLEKLQTNLRKVIK--------------GVGGLNHEQWRSFNNE-KKTVD 728
             + +P +    L +LQ+ L  +                  G L+ +++RS+ +  ++T +
Sbjct: 1048 FSLIPPQNQDLLMRLQSRLASLPARSLTDSSFSAPIEFSPGNLDFDKYRSYVSAVRETNE 1107

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
               F+DG+LIE FLDL     + I   + V  E+L   VE L RL
Sbjct: 1108 PFRFVDGELIERFLDLDGAIQENICDGLGVRAEDLRGVVEGLRRL 1152


>gi|121699866|ref|XP_001268198.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
 gi|119396340|gb|EAW06772.1| UV-damaged DNA binding protein, putative [Aspergillus clavatus NRRL
            1]
          Length = 1140

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 229/786 (29%), Positives = 392/786 (49%), Gaps = 45/786 (5%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIG 73
            V+V++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G
Sbjct: 364  VDVVQTLPNIAPILDFTIMDLGSRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRSGVG 423

Query: 74   INEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFC 131
            + E   + E+  I  +W L+  +   F   L+V+F+ ETR+   + + E+EE +   G  
Sbjct: 424  MEELGVLGEMDHITDLWGLQVGSKGDFLDILLVTFVDETRVFHFSPDGEVEEMDHFLGLS 483

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TL   +    +++QVT   V +       +  EW  P    +  A+ N   ++L  
Sbjct: 484  LSENTLLAANLPGGRILQVTERRVLIAEVEGGMVTYEWTPPNQLIITAASTNNDMIVLVA 543

Query: 192  GGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
            GG  +  L+IG+ + L   K      +IS + +     +P+   IA       +SV    
Sbjct: 544  GGELVTVLDIGNEVRLVTQKDFGANSQISGVTVP---ASPTGVFIAGFPQLAKVSV--LK 598

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            L DL  +    +G  GE  PRSVL+     +    L  ++ DG ++ +  N     LT  
Sbjct: 599  LQDLAEVQSTSVGPAGEAFPRSVLVADVLSDSPPTLFISMADGSVITYSFNPDDVSLTGM 658

Query: 307  KKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K+ LG++  T +     +   +VFA  + P++IY S  +++YS VN +  S +C  NS 
Sbjct: 659  TKLILGSEQPTFKKLPRGDGLFNVFATCENPSMIYGSEGRIIYSAVNSEGASRICHLNSE 718

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
            A+P S+A+A   +L I  +D  +   I+++P+G   RR+ +    + F I +++ +    
Sbjct: 719  AYPGSIAVATLHDLKIALVDKERTTQIQTLPIGATVRRVAYSPSEKAFGIGTIERKLVDG 778

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF---SDDSNVY-----YCVGTA 475
            AE  +  F+ L D+  F  +  + L   E   S++   F    D+ N       + VGTA
Sbjct: 779  AEIVKSEFM-LADEILFRRLDAFELRPEELVESVIRAEFPVGKDEKNGATVKDRFIVGTA 837

Query: 476  YVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
            ++  E +E  +GRIL+F V++G KL  +AE   KGA  +L     +++AA+ + + +YK 
Sbjct: 838  FLDDEGDESIRGRILIFEVDNGRKLTQVAELPVKGACRALAMLGNRIVAALVKTVVVYKA 897

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE----ER 590
            +  + G  +L+    +      + V   G+ I V DLMKS+ L+ YK  E  +     E 
Sbjct: 898  VSNNFGAMKLEKLASYRTSTAPVDVTVTGNLIAVSDLMKSVCLVEYKEGEDGLPDTLTEV 957

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR +   W + V  +  D +L ++   NL  + +N+ G  ++++ RLEV GE  LGE VN
Sbjct: 958  ARHFQTVWATGVACIAQDTFLESDAEGNLIILCRNTTGVEEDDKRRLEVTGEISLGEMVN 1017

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG 710
            R R  + + +L  + V   P     TV G I + A +  +   FL +LQ  +   ++ VG
Sbjct: 1018 RIRPVN-IQQL--TSVAVTPRAFLATVEGSIYLFAMINPDHQDFLMRLQATIAGKVELVG 1074

Query: 711  GLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI-SKTMNVSVEELCKRVE 768
             +   ++R F++  ++  +   F+DG+LIE FL    +  +EI S    ++V+E+   +E
Sbjct: 1075 NMPFNEFRGFHSMVREAQEPYRFVDGELIERFLACEPSVQEEIVSIVGKMTVDEVKSMIE 1134

Query: 769  ELTRLH 774
             L RLH
Sbjct: 1135 ALRRLH 1140


>gi|170090007|ref|XP_001876226.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649486|gb|EDR13728.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1275

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 252/828 (30%), Positives = 393/828 (47%), Gaps = 82/828 (9%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            +  GS++EVL  Y NL PI+D  +VD +  GQ  +VTCSGA   GS+ IVRNG    E  
Sbjct: 458  ETHGSFIEVLSSYKNLAPILDAILVDTDGSGQQHIVTCSGARSTGSINIVRNGADFQEIG 517

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE------LEETEIEGFC 131
             V  L G+ G+WS+R+  +D  D +++VS    T +  ++          ++ T I    
Sbjct: 518  HVPGLTGVVGVWSVRTMLEDTTDRYILVSTNRSTHLFEIDDSGSTSTITPVDSTTIRSLV 577

Query: 132  SQTQTLFCHD----------AIYNQ---LVQVTSGSVRLVSSTSR----ELRNEWKS--- 171
            +   TL   +          ++Y      VQV +   RL+ S +     EL  ++     
Sbjct: 578  TTEATLAFSNLARRSSVGGSSVYKNSPLAVQVVASGARLLKSNTAFGGYELVAQYSMLSS 637

Query: 172  -PPG---YSVNVATANASQVLLATGGGHLVYLEIGDGI--LTEVKHAQLE--YEISCLDI 223
             P G     V  A+ANASQ+++A  GG L    +G+ +  L  +   Q +   EIS +  
Sbjct: 638  VPYGQRPLEVVAASANASQLVMAASGGKLTLWRLGENVDALEMIAGCQRKEGPEISAVSC 697

Query: 224  NPIGENPSYSQIAAVGMWTDISVRIF--SLPDLNLITKEHLGGEIIPRSVLLCAFEGIS- 280
             P+      S    V  W   ++ I   SL  L  + K      ++ RSVLL  F   + 
Sbjct: 698  APLNTTKRTSPTIIVSYWQSNTIEILQVSLKGLESVYKSPTLPALV-RSVLLYNFGSDTN 756

Query: 281  --------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 332
                    YLL  L +G + +F    K  +LTD+K + LG  P+ L     +    VFAA
Sbjct: 757  PKGTDHHPYLLAGLANGTVASF--RWKDKQLTDKKIIPLGHAPVNLMPCQVEGRHAVFAA 814

Query: 333  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 392
             +R TV+   NK+L++S + LK++S     N+  F  SL ++    L IG +  + KLHI
Sbjct: 815  GNRATVLSFENKRLVHSPIMLKDISSAARLNTPTFASSLILSTPTGLFIGRVQGLGKLHI 874

Query: 393  RSIPLG-EHPRRICHQEQSRTFAICSL---KNQSCAEESEMHFVRLLDDQTFEFISTYPL 448
            RSIP G ++PR+I H+   + F +       N+    E      +LLDD +F  +  +  
Sbjct: 875  RSIPFGFDNPRKIAHEPSIKAFGVAFTTMEPNRVNDPEISRSSFKLLDDTSFANLCQFNC 934

Query: 449  DTFEYGCSILSCS--FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG-----KLQL 501
            D  E   +++S S   +     ++CVGT      E EP+ GR+++F           L L
Sbjct: 935  DPDEETTAVVSFSQKIAGKPMPFFCVGTYVYKAGEVEPSAGRLMIFTATTSTSSNLALSL 994

Query: 502  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG--HHGHILALYV 559
            +A  +  G VY+L     +++AA+N  + L++     D       +    HH + L   +
Sbjct: 995  MASTKVPGCVYALTVVQNQIVAAVNSSVMLFRLESSSDSLSPSLIKVSEWHHNY-LVTSL 1053

Query: 560  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 619
             +  D +VVGD   SISLL  +  +  +  +ARDY   W   VE LD+   +GA ++ NL
Sbjct: 1054 GSYADRVVVGDQPSSISLL--QVTQSKLISQARDYGPLWPVCVEALDERHIIGANDSLNL 1111

Query: 620  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
            FT   + E A    R RLE  G YH+ + V +F  GSL      +        +F T +G
Sbjct: 1112 FTF--SLEKAMG--RSRLERDGCYHVADLVTKFLRGSLSSSDASTTSPLTSEAMFFTSSG 1167

Query: 680  VIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN----FLD 734
             IGV+  +  E+  L L  +Q NL  VI+GVGG +H ++R+    + T DA +    FLD
Sbjct: 1168 RIGVVVDVKDEELSLQLTNMQRNLANVIQGVGGSSHSKYRAPKTTRGTSDADSGAIGFLD 1227

Query: 735  GDLIESFLD--LSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 774
            GD +E FL   LS  + +++       + + ++ E L   +E+L  LH
Sbjct: 1228 GDFLEQFLTHVLSPQQSEKVIQGQSPPERLTITREALQMVIEDLQSLH 1275


>gi|296411833|ref|XP_002835634.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629420|emb|CAZ79791.1| unnamed protein product [Tuber melanosporum]
          Length = 1053

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 217/685 (31%), Positives = 346/685 (50%), Gaps = 52/685 (7%)

Query: 14   LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE--------RQ---GQGQVVTCSGAYKD 62
            L L  +     V V +   N+GPIVDF V+DL+        RQ   G  + ++ SG +  
Sbjct: 343  LQLYQNGIKPMVRVQQVLRNIGPIVDFRVMDLDYSRSDEVMRQYSPGHIRFLSASGGHTQ 402

Query: 63   GSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            G LR +R+G+G+ +   + E+ GI+G+WSLRS     FD  LVVSFI ETRI   +   E
Sbjct: 403  GHLRTIRSGVGLYDLGFLGEMSGIRGLWSLRSIPGSSFDDVLVVSFIEETRIFKFDNSGE 462

Query: 122  LEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            +EE  E  GF    +T+  H  +  + +QVT+ +V+LV   S  L  E  S P  S+ + 
Sbjct: 463  IEELYEFMGFALNQRTILAHSVVGGRFLQVTATAVKLVDVRSNTLIAE--SYPDKSLTIT 520

Query: 181  TANASQ-VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             A+A+Q +L+   G  LV L +    L E      E EISCL++       S S I AVG
Sbjct: 521  IASANQDLLIYAMGPTLVLLNLARD-LEEHIRTTFENEISCLNMPS-----SPSTICAVG 574

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAF--EGISYLLCALGDGHLLNF 294
             WT   V I S+   +++++E L  E     PRS+L       G   LL ALGDG +  F
Sbjct: 575  FWTVSLVLILSVQSFSILSQEILSQEDSAATPRSLLFARLLENGPPTLLVALGDGSMFTF 634

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNT-THVFAASDRPTVIYSSNKKLLYSNVNL 353
             LN  T  L++RK + LG QPI  ++    N    VFA  D P+VIY S+ +++Y++V  
Sbjct: 635  ALNETTCGLSERKHIILGAQPIRFQSIPGGNGGVTVFATCDHPSVIYGSDGRIVYASVTA 694

Query: 354  KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTF 413
             + +++  FNS +FPD++ IA E +L +  +D ++ +H++S+P+G+  RRI + ++    
Sbjct: 695  DKPTYVTSFNSPSFPDAVVIASEDDLKLSVVDPVRTMHVQSLPVGDVVRRIAYSKEKNII 754

Query: 414  AICSLKNQSCAEESEMHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY- 469
            AI ++         +  +   +RL+D+  F  + +Y L+  E   S+ S      + +  
Sbjct: 755  AIVTVSKVPDTRTGDYLYSSCIRLVDNTAFSVVDSYELNQLELVESLASGKICGGNGLLS 814

Query: 470  --YCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFN-GKLLAAI 525
              +  GT Y     +E  KGRI+VF   E  +++LI   +T G+V  +     GK +AAI
Sbjct: 815  EGFLAGTVYPGGGRDESEKGRIIVFNASETKRIKLIVSYDTPGSVNGIQIVGEGKFVAAI 874

Query: 526  NQKIQLYKWMLRDDGTRELQSE------------CGHHGHILALYVQTRGDFIVVGDLMK 573
             ++I LY     D  ++   SE                 H   L V    D I V D M 
Sbjct: 875  GREIHLYSLKYTDIQSKTAASESVGATGCTITKLASFKAHSTPLDVAVYNDIIAVCDFMH 934

Query: 574  SISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
              S+L +    +++     E AR    +W++A+E+LD+     A+ + NL   ++   G 
Sbjct: 935  GPSILQHIEDKENKSSEFVEVARAPKPSWLTALELLDEKTVFCADTDGNLVVWQRQLSGV 994

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRH 654
            T+++R +L+ +    +GE ++R R 
Sbjct: 995  TEDDRKQLQQIASMKIGEDIDRIRR 1019


>gi|392566425|gb|EIW59601.1| hypothetical protein TRAVEDRAFT_167065 [Trametes versicolor FP-101664
            SS1]
          Length = 1263

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 240/790 (30%), Positives = 369/790 (46%), Gaps = 82/790 (10%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            KG+Y+EVL+ + N+ PI+D  + D++  GQ QV+T SGA   GSLR++R      EQA +
Sbjct: 452  KGTYLEVLQTHDNVAPIMDAVLADIDGSGQPQVITASGARNTGSLRVIRTEADFQEQAKL 511

Query: 81   E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFCSQTQTL 137
            + L GI  +W +R   +D   T LVVS   ET +L+   +D +   E  + GF +   T 
Sbjct: 512  DGLPGITDIWPVRPRFNDATHTHLVVSTSRETLVLSFAGQDTITHVEPSVAGFATHVPTY 571

Query: 138  FCHDAIYNQ-----------------LVQVTSGSVRLVSSTSR-----ELRNEW------ 169
               +    Q                 + Q+TS  VRLV               W      
Sbjct: 572  AIGNVPRRQTTTSGGRTTSSYVDSPLVAQITSEGVRLVEYDPTLNGFTPFGAGWYPKKSG 631

Query: 170  -KSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIG 227
              S  G  +  A  + SQ ++   GG L  L +G +  L  VK      EI  +   P  
Sbjct: 632  DASMAGRDIVAAAMSPSQFVVGLSGGRLALLNLGANDALQVVKTRDFPDEICAISCTPFD 691

Query: 228  ENPSYSQIAAVGMWTDISVRIFSL--PDLNLITKEHLGGEIIPRSVLLCAFEGIS----- 280
               +Y+   AV  W+   + + SL  P   L     +    +PRS+LL  F   +     
Sbjct: 692  PTKNYATHIAVSFWSSNKIAVLSLDSPASYLGPICEVSLPTLPRSILLHNFGAGARPKDA 751

Query: 281  ----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 336
                +LL  L DG+++ F L  + GEL D K  SLG  P +L   +    T V A   R 
Sbjct: 752  DFRPHLLAGLADGNVMTFAL--RDGELHDSKASSLGNAPASLSLCAVDGRTVVLAGGARS 809

Query: 337  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP 396
             V+Y   +++  S V +K ++     N+AAFP  LAIA    L IG +  + K+ IR+IP
Sbjct: 810  NVLYWDRQRIRPSPVGVKYMARGATLNTAAFPSCLAIATSSALLIGNVRGVDKMQIRTIP 869

Query: 397  LG-EHPRRICHQEQSRTFAICSLKNQSCA---EESEMHFVRLLDDQTFEFISTYPLDTFE 452
            LG ++PR++ +    + F +   +         E      +LLD  +F+ +  +  D  E
Sbjct: 870  LGMDNPRKMAYHAGQQVFGVACARTAPGRVGDNEDITGSFKLLDAHSFQQLHHFQCDPDE 929

Query: 453  YGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTKGRILVFIV--EDG--KLQLIAEKET 507
               S+L+       S+  +C+GTA + PEE EP+ GRIL+F +  E+G   L  +A  + 
Sbjct: 930  EPASVLALPGEGSASSPAFCLGTAVIRPEEREPSNGRILLFSLSSENGVRSLTTVASHKV 989

Query: 508  KGAVYSLNAFN-GKLLAAINQKIQLYKWMLRD-------DGTRELQSECGHHGHILALYV 559
            +G VY+L   + G + AAIN  + LYK  +R+       D   +  +E  H+  + +L  
Sbjct: 990  RGCVYALQHVSEGVIAAAINTSVLLYK--IREGNLGEGFDRVLDKAAEWNHNHFVTSLVW 1047

Query: 560  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 619
               G F++VGD + S+S+L    +   +E  ARDY   W  A+E   +   +GA ++ NL
Sbjct: 1048 D--GQFLLVGDAISSVSVLRVADDATKLESVARDYAPLWPVAIESTGNGGVIGANSDCNL 1105

Query: 620  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV----IFG 675
            F+           +R  LE  G YH+ + VN+   G+L      +DV Q   V    +F 
Sbjct: 1106 FSFALQR----GPQRNGLEKNGVYHIDDVVNKLIKGALS----SADVSQDQAVKAGHVFF 1157

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NF 732
            T  G IG I  +     L +  LQ N+ K + G GG+NH + R+    +   DA+    F
Sbjct: 1158 TSTGRIGAILDMNDTMSLHMTALQRNMAKSLIGPGGVNHTKRRAPATPRGHTDAEASYGF 1217

Query: 733  LDGDLIESFL 742
            LDGD +E+FL
Sbjct: 1218 LDGDFLETFL 1227


>gi|392864500|gb|EAS34654.2| UV-damaged DNA binding protein [Coccidioides immitis RS]
          Length = 1144

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 229/796 (28%), Positives = 401/796 (50%), Gaps = 54/796 (6%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGAYKDGSLRIVRN 70
            +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA++DGSLR VR+
Sbjct: 361  EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRS 419

Query: 71   GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IE 128
            G+G+ +   +  ++ I  +W L +   + F   L++SF+ E+R+   + + E+EE +   
Sbjct: 420  GVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFL 479

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            G      T+   +    +++QVT    R+    SR    EW +     +  A++N   ++
Sbjct: 480  GLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLV 539

Query: 189  LATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQIAAVGMWTDIS 245
            L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q   +       
Sbjct: 540  LMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------QACILCFPQSAE 592

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGHLLNFLLNMKTG 301
            V I  L  LN+   E LG  G+ +PRSVL+ C F +    L  A+ DG + +F LN+   
Sbjct: 593  VTIIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGSVFSFSLNVANY 652

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS VN  + + +C
Sbjct: 653  SLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYSAVNSDKATRIC 712

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FN+ A+P ++A+A   ++ I  +D  +   I+++ + E  RR  +    R F + +++ 
Sbjct: 713  HFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRTSYSSTERAFGLGTIQR 772

Query: 421  Q--SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSFSDDSNV-------YY 470
                  EE + HF+ L D+  F  +S + L+  E   C I +   S ++ +        +
Sbjct: 773  TLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNELVECVIRTEHPSSNAQMGSSRPRDIF 831

Query: 471  CVGTAYV-LPEENEP-TKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VGT+ +  PEE E  TKGRILVF V+  + L+ I +   +GA  +L   N K++AA+ +
Sbjct: 832  IVGTSVLDTPEEAEARTKGRILVFDVDTNRELRKICDFPVRGACRALAMINNKIVAALMK 891

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA- 586
             + +      +    E++ E  +      + +   G+ I V DLMKSISL+ Y   EG  
Sbjct: 892  TVVVLNIKKGNLYNFEIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQ 951

Query: 587  ---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
               ++E AR Y   W +A   + ++ +L A+   NL  + +++ G T+++R R++V  E 
Sbjct: 952  PDTLKEVARHYQTLWTTAAAPVAENEFLVADAEGNLVVLNRDTTGVTEDDRRRMQVTSEL 1011

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
             LGE VNR  H   +   P+S V  IP     TV+G I +   +       L +LQ+ L 
Sbjct: 1012 RLGEMVNRI-HPMDLQTSPESPV--IPKAFLATVDGSIYLFGLISPSAQDTLMRLQSALA 1068

Query: 704  KVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFL----DLSRTRMDEISKTMNV 758
              +   G +   ++R+F +  +  +    F+DG+LIE FL    D+    +  +     V
Sbjct: 1069 DFVASPGEIPFNKYRAFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEAALARMDGGGRV 1128

Query: 759  SVEELCKRVEELTRLH 774
            +V E+   +E L R+H
Sbjct: 1129 NVIEIKGMIEGLKRMH 1144


>gi|154286506|ref|XP_001544048.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407689|gb|EDN03230.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1158

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 232/796 (29%), Positives = 390/796 (48%), Gaps = 50/796 (6%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRIV 68
            +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR V
Sbjct: 371  EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRTV 429

Query: 69   RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE- 126
            R+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E+EE E 
Sbjct: 430  RSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKEE 489

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              G      TL   +  + +++QVT  +VR+       +  EW      ++  A++N   
Sbjct: 490  FMGLGLAESTLLAANLPHGRILQVTEWNVRVAELDGGMVIWEWSPEQQKAITAASSNDDH 549

Query: 187  VLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            ++L  GG  L+  +I GD  +T  K    + ++S + +     +P  + I  +    ++ 
Sbjct: 550  LVLMVGGQVLMIFDIRGDINITGEKDFGFDTQVSGVTVT---TSPVRACILCLPQTAEVV 606

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V   SL DL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N++  
Sbjct: 607  V--MSLSDLAIRRSTSLGEPGDAVPRSVLVAEVLSNNPATLFVSMADGSVFSFSFNLEDF 664

Query: 302  ELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K++LG+ QP   +        +VFA  ++P +IY+   +++YS VN    S +C
Sbjct: 665  SLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPRLIYAVEGRIVYSAVNSGLASRIC 724

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K 
Sbjct: 725  HFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIKR 784

Query: 421  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV--------YY 470
              +  AE     F+ L D+  F  +  Y L+  E   S++   F D  +          +
Sbjct: 785  TLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIDREGNDLFKDLF 843

Query: 471  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + +
Sbjct: 844  VVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTV 903

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +Y           L     +      + +   G+ I V DLMKS+S++ Y+        
Sbjct: 904  VVYTISKGQFADYTLSKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGSNGLPD 963

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV  E  L
Sbjct: 964  SLTEVARHFQTLWSTAVAHVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEILL 1023

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + +     ++    P    GTV G I +   +       L +LQ+ +  +
Sbjct: 1024 GEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMAGM 1082

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNV 758
            +   GG+   ++R+F N  ++  +   F+DG+LIE FL  S    +EI           V
Sbjct: 1083 VVTPGGMPFNKFRAFRNTIRQAEEPYRFVDGELIERFLSCSVELQEEIVGKVIADGVTGV 1142

Query: 759  SVEELCKRVEELTRLH 774
            +VE +   VEEL R+H
Sbjct: 1143 TVESVKGLVEELRRMH 1158


>gi|310796681|gb|EFQ32142.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1163

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 227/800 (28%), Positives = 391/800 (48%), Gaps = 71/800 (8%)

Query: 33   NLGPIVDFCVVDLER-----------QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE 81
            N+ PI+DF ++DL              GQ ++V   G +++GSLR +R+ +G+ +   ++
Sbjct: 377  NIAPILDFSIMDLGNAGDSQVGNAFSSGQARIVAGCGVHQNGSLRSIRSSVGLEDIGVLD 436

Query: 82   -LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEGFCSQTQTLFC 139
             L+ ++G++SLRS      DT LVVSFI+ETR+   + E  +EE  + +G      TL  
Sbjct: 437  DLRDVRGLFSLRSYGSAKVDT-LVVSFITETRVFRFDPEGGIEEVFDFQGLVLDRPTLVA 495

Query: 140  HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL 199
                   L+Q+T+ +V ++ S S    + W  P G ++  A+AN    LL+  G  LV L
Sbjct: 496  TTLPSGHLLQITATAVTVLDSESGVTLSTWAVPDGKTIVNASANNKWALLSISGTTLVSL 555

Query: 200  EIGDGILTEVKH-----AQLEYEISCL----DINPIGENPSYSQIAAVGMWTDISVRIFS 250
             + D +  + +         E +ISC+    D++ IG          VG W   SV I  
Sbjct: 556  NLSDNLSAQEQVLCRPIGGQEDQISCIHAARDLDDIG---------VVGFWATGSVSIIH 606

Query: 251  LPDLNLITKEHL----GGEIIPRSVLLCAFEGI----SYLLCALGDGHLLNFLLNMKTGE 302
            L  L+ +  E +        +PR + L            L  A+ DG +++F ++ +   
Sbjct: 607  LGTLHALQGETVKQTDDSVSVPRDLALVQLHPPHLLGPTLFVAMEDGQVVSFNVSKEDFS 666

Query: 303  LTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
            L+ RK V+LG+Q   L        +  +++FA ++  ++IYSS  +++YS    ++V+++
Sbjct: 667  LSSRKSVTLGSQQAGLHILPRPGDEGISNIFATTEHSSLIYSSEARVMYSAATAEDVTYI 726

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 419
             PF+S AFPD++ +A    + I  ID  ++ H+  + L E  RR+ +    R F I ++ 
Sbjct: 727  APFDSEAFPDAIFLATNRNIRIAHIDPERRTHVNPLQLRETVRRVAYSPALRAFGIGTIH 786

Query: 420  NQ-SCAEESEMHFVRLLDDQTFEFI-STYPLD---TFEYGCSILSCSFSDDSNV---YYC 471
             + +  EE      +L+D+     +   + LD   + E   S++     D        + 
Sbjct: 787  RELTNNEEVVTSSFQLVDEIVLGVVGKPFHLDGSISAEMVESVIRAELPDSMGQPAERFI 846

Query: 472  VGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
            VGT+Y+     +E+  TKGRILV  V+ D    LI   E KGA  SL     KL+A +++
Sbjct: 847  VGTSYLADPDIDESGDTKGRILVLGVDSDKNPYLIVSHELKGACRSLGVMGEKLVAGLSK 906

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY----KHE 583
             + +Y ++     +  L+           + +   G+ I + DLM+S++L+ +       
Sbjct: 907  TVVVYDYVEESTTSGALRKLATFRPSTFPVDIDVHGNMIGIADLMQSLTLVEFVPAQDGN 966

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
            +  + ERAR +   W ++V  L+   +L A+   NL  +R+N    T+ +R ++EV GE+
Sbjct: 967  KAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPNAPTEHDRKQMEVTGEF 1026

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
            HLGE VN+ R   +    P+ +   IP     TV G + V A +  E    L + Q  L 
Sbjct: 1027 HLGEQVNKIRSLDIT---PNENDPIIPKAFLATVEGSLYVFADIKSEYQSLLIQFQERLA 1083

Query: 704  KVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISK 754
            +V++ +G        GL+   WR F N K+  +    F+DG+LIE FLDL   + + + +
Sbjct: 1084 EVVRALGQADGEPGSGLSFTTWRGFRNAKRAAEGPFRFVDGELIERFLDLDEAKQEAVVQ 1143

Query: 755  TMNVSVEELCKRVEELTRLH 774
             +  +VE +   VEEL R+H
Sbjct: 1144 GLGPTVESMRNLVEELKRMH 1163


>gi|115397303|ref|XP_001214243.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192434|gb|EAU34134.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1140

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 231/792 (29%), Positives = 397/792 (50%), Gaps = 51/792 (6%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+
Sbjct: 361  GSF-EIIQTLPNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRS 419

Query: 71   GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIE 128
            G+G+ E   + E++ I  +W L+      F   L+V+FI ETR+   + + E+EE  +  
Sbjct: 420  GVGMEELGVLGEMEHITDLWGLQFKAKGDFLDTLLVTFIDETRVFHFSSDGEVEELDQFL 479

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
            G      TL   +    +++QVT   V +    S  +  EW       +  A+AN   V+
Sbjct: 480  GLSLSENTLLAANLPGGRILQVTERRVLIADMESEMVTYEWTPSDQLIITSASANEDSVV 539

Query: 189  LATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDI--NPIGENPSYSQIAAVGMWTDIS 245
            L  GG  +   +I + + +   K+   + +IS + +  +P G       +  VG      
Sbjct: 540  LVAGGELMTVFDIRNNVQIVTQKNFGADSQISGVTVPSSPTG-------VCIVGFPQSAK 592

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLC--AFEGISYLLCALGDGHLLNFLLNMKTG 301
            V +  L DL  +    LG  GE  PRSVL+     +    +  ++ DG ++ +  N    
Sbjct: 593  VSVLKLQDLTELHATSLGPEGEAFPRSVLVANVLVDSPPTIFISMADGSVITYSFNANDY 652

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C
Sbjct: 653  SLTGMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVC 712

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL-- 418
             FNS A+P+S+A+A   EL I  +D  +   I+++P+G   RR+ +    + F I ++  
Sbjct: 713  HFNSEAYPESIAVATSHELKIALVDKERTTQIQTLPMGATVRRVAYSPSEKAFGIGTIER 772

Query: 419  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS--------DDSNVYY 470
            K +  AE  +  FV L D+  F  +  + L + E   S++   F         D     +
Sbjct: 773  KLEEGAEIVKSQFV-LADEILFRRLDAFDLRSEELVESVIRAEFPVGKDEKGRDMFKDRF 831

Query: 471  CVGTAYVLPEEN-EPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
             VGTAY+  +E+ +  +GRIL+F V++G KL  +AE   KGA  +L     K++AA+ + 
Sbjct: 832  VVGTAYLDEDEDRDSIRGRILMFEVDNGRKLTKVAELAVKGACRALAMLGDKVVAALVKT 891

Query: 529  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-KHEEG-- 585
            + +YK    + G  +L+    +      + +    + I V DLMKS  L+ Y + E+G  
Sbjct: 892  VVIYKVTGNNFGAMKLEKLASYRTSTAPVDITVTDNVIAVSDLMKSSCLVEYIEGEDGLP 951

Query: 586  -AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +++E AR +   W + +  +    YL ++   NL  +R+N  G  ++++ RLEV GE  
Sbjct: 952  DSLKEVARHFQTVWATGIACIAPHTYLESDAEGNLIILRRNLSGVEEDDKRRLEVTGEIS 1011

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            LGE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +  
Sbjct: 1012 LGEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLYAIINPEHQDFLMRLQATMAG 1068

Query: 705  VIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEE 762
             I+ +G +   ++R F +  ++  +   F+DG+LIE FL    +  ++I  ++  ++V +
Sbjct: 1069 KIESLGDMPFNEFRGFRSMVREAKEPYRFVDGELIERFLTCEPSVQEDIVNSVGMMNVHD 1128

Query: 763  LCKRVEELTRLH 774
            +   +E L RLH
Sbjct: 1129 VKVMIEALRRLH 1140


>gi|391865638|gb|EIT74917.1| damage-specific DNA binding complex, subunit DDB1 [Aspergillus oryzae
            3.042]
          Length = 1135

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 238/791 (30%), Positives = 401/791 (50%), Gaps = 50/791 (6%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+
Sbjct: 357  GSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRS 415

Query: 71   GIGINEQASV-ELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMNLEDELEETE-I 127
            G+G+ E   + +++ I  +W L+  +  D  DT L+V+FI ETR+   + + E+EE +  
Sbjct: 416  GVGMEELGVLGDMEHITDLWGLQVQAGGDTLDT-LLVTFIDETRVFHFSPDGEVEELDHF 474

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             G      TL   +    +++QVT   V +       +  EW  P    +  A+AN   +
Sbjct: 475  LGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGEMVVYEWTPPNELVITAASANDDSL 534

Query: 188  LLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +L  GG  +  L+IG    ++TE K    + ++S + +       S +++  VG      
Sbjct: 535  VLVIGGELMTVLDIGTEAQVITEKKFGA-DSQVSGVTVPA-----SPTEVCVVGFPQLAK 588

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V +  L DL  +    LG  GE  PRSVL+     +    L  ++ DG ++ +       
Sbjct: 589  VSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSPPTLFISMADGSVITYSFKTDDY 648

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             L+   K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C
Sbjct: 649  SLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVC 708

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +G   RR+ +    + F I +++ 
Sbjct: 709  HFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPSEKAFGIGTIER 768

Query: 421  QSCAEESEMHFVR--LLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YY 470
            +  A+ +E+   R  L D+  F  + ++ L   E   S++   F    D N        +
Sbjct: 769  K-LADGAEIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRF 827

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGTAY+  E  E  +GRIL+F +++G KL  +AE   KGA  +L     K++AA+ + I
Sbjct: 828  VVGTAYLDDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTI 887

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +YK +  + GT +L+           + V   G+ IVV DLMKS+ LL +K  E     
Sbjct: 888  VIYKVVNNNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPD 947

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W + V  +D D +L ++   NL  +R+N  G  +++R RLEV  E  L
Sbjct: 948  SLTEVARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 1007

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   
Sbjct: 1008 GEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGK 1064

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEEL 763
            ++ +G +   ++R F +  ++  +   F+DG+LIE FL+      +EI  ++  ++V E+
Sbjct: 1065 VESLGEMPFNEFRGFRSMVREATEPYRFVDGELIEQFLNCEPELQEEIVNSVGMMNVHEV 1124

Query: 764  CKRVEELTRLH 774
               +E L RLH
Sbjct: 1125 KVMIEALRRLH 1135


>gi|296803967|ref|XP_002842836.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
 gi|238846186|gb|EEQ35848.1| DNA damage-binding protein 1a [Arthroderma otae CBS 113480]
          Length = 1143

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 224/789 (28%), Positives = 402/789 (50%), Gaps = 52/789 (6%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAYKDGSLRIVRNGIGINE 76
            ++++   N+ PI+DF V+DL  +         GQ ++VT SGA+ DGSLR VR+G+GI +
Sbjct: 367  DLVQTIANIAPILDFTVMDLGDRSGEAREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIED 426

Query: 77   QASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS--- 132
               +  ++ I  +W LR++  +PF   L+VSF++E+R+   + E ++EE E EGF     
Sbjct: 427  LGVLASMEHITDLWGLRAACPEPFSDTLLVSFVNESRVFHFSPEGDVEEKE-EGFLGLVF 485

Query: 133  QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGYSVNVATANASQVLLAT 191
               TL   +   N+++QVT    +++   S      W+S     ++  A+AN   ++L  
Sbjct: 486  SQSTLLAANLPGNRIIQVTENMAKIIDLDSS--MTTWQSSHEDSAITSASANDDYLVLVF 543

Query: 192  GGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            GG  L+ + +        K  + + ++S + I       S +Q   V +     + I  L
Sbjct: 544  GGIRLICVSLSSYEEVGSKDFEADNQVSGMTIPA-----SPAQACIVCLPQSAEIVILDL 598

Query: 252  PDLNLITKEHLG--GEIIPRSVLLCA--FEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            PDL +  K+ LG  GE IPRSV++    ++    L  ++ DG + +F  +++   +++  
Sbjct: 599  PDLKVQNKQTLGEPGEAIPRSVIVAEILYDQSPTLFVSMADGTVFSFSFSLEAFTISNSS 658

Query: 308  KVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            K++LG+ QP+  +        +VFA  D P++IY+S  +++YS V+    S +C  N+ A
Sbjct: 659  KITLGSEQPLFKKLPRGNGQYNVFATCDHPSLIYASEGRIVYSAVDSDSASRICNLNTQA 718

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN--QSCA 424
            +P S+A++ + EL I  +D+ +   I ++P+    RR+ +    + F + ++     +  
Sbjct: 719  YPGSIALSNQRELKIAIVDEERTTQIHTLPMHASVRRLAYSPVEKAFGLGTVTRTISNGV 778

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-----VY---YCVGTAY 476
            E+    FV L D+  F  +ST+ L + E   S++     D  +     V+   + VGTA+
Sbjct: 779  EKVSSSFV-LADEILFRPLSTHELRSDELVESVIRSQIPDGEDEVGNTVFRDLFFVGTAF 837

Query: 477  VLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAF-NGKLLAAINQKIQLYKW 534
            +    ++  +GRIL F V   + L L+ +K   GA  +L    N KL+A + + + +++ 
Sbjct: 838  LDDVGDDNVRGRILAFEVNRSRELALLVDKPVLGACRTLAVMDNDKLVAGLVKSVSIFRI 897

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-KHEEGAI----EE 589
            +    G  EL  +  +      + V    + I V D+MKS+SL+ Y   EEGA+    EE
Sbjct: 898  VRDSFGNIELLKQTAYRTSTAPIDVSVTENTIAVADVMKSVSLVQYTPAEEGALEPKFEE 957

Query: 590  RARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFV 649
             AR Y   W +AV  +++++YL AE   NL  +++N+ G T+ +R RL+   E  LGE V
Sbjct: 958  IARHYQTLWSTAVGHIEENVYLLAEAEGNLVVLQRNTTGVTESDRKRLQPTSEMRLGEMV 1017

Query: 650  NRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGV 709
            NR     + ++ P +        +  TV+G I +   +       L +LQ  +  V    
Sbjct: 1018 NRIH--PITVQAP-AKAAVSARALLATVDGSIYLFGLINPTYIDLLLRLQAIMASVTVSP 1074

Query: 710  GGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTM---NVSVEELCK 765
            G +   ++R+F    +  D    F+DG+LIE FL  + +  +EI+  +   N++V  L +
Sbjct: 1075 GEIPFTKYRAFRTTVRQSDEPFRFVDGELIERFLGCAPSTQEEIASRLDDQNITVASLKE 1134

Query: 766  RVEELTRLH 774
             ++EL R+H
Sbjct: 1135 MIDELRRMH 1143


>gi|169773185|ref|XP_001821061.1| UV-damaged DNA binding protein [Aspergillus oryzae RIB40]
 gi|83768922|dbj|BAE59059.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1139

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 238/791 (30%), Positives = 401/791 (50%), Gaps = 50/791 (6%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+
Sbjct: 361  GSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRS 419

Query: 71   GIGINEQASV-ELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMNLEDELEETE-I 127
            G+G+ E   + +++ I  +W L+  +  D  DT L+V+FI ETR+   + + E+EE +  
Sbjct: 420  GVGMEELGVLGDMEHITDLWGLQVQAGGDTLDT-LLVTFIDETRVFHFSPDGEVEELDHF 478

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             G      TL   +    +++QVT   V +       +  EW  P    +  A+AN   +
Sbjct: 479  LGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGGMVVYEWTPPNELVITAASANDDSL 538

Query: 188  LLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +L  GG  +  L+IG    ++TE K    + ++S + +       S +++  VG      
Sbjct: 539  VLVIGGELMTVLDIGTEAQVITEKKFGA-DSQVSGVTVPA-----SPTEVCVVGFPQLAK 592

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V +  L DL  +    LG  GE  PRSVL+     +    L  ++ DG ++ +       
Sbjct: 593  VSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSPPTLFISMADGSVITYSFKTDDY 652

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             L+   K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C
Sbjct: 653  SLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVC 712

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +G   RR+ +    + F I +++ 
Sbjct: 713  HFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPSEKAFGIGTIER 772

Query: 421  QSCAEESEMHFVR--LLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YY 470
            +  A+ +E+   R  L D+  F  + ++ L   E   S++   F    D N        +
Sbjct: 773  K-LADGAEIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRF 831

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGTAY+  E  E  +GRIL+F +++G KL  +AE   KGA  +L     K++AA+ + I
Sbjct: 832  VVGTAYLDDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTI 891

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +YK +  + GT +L+           + V   G+ IVV DLMKS+ LL +K  E     
Sbjct: 892  VMYKVVNNNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPD 951

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W + V  +D D +L ++   NL  +R+N  G  +++R RLEV  E  L
Sbjct: 952  SLTEVARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 1011

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   
Sbjct: 1012 GEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGK 1068

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEEL 763
            ++ +G +   ++R F +  ++  +   F+DG+LIE FL+      +EI  ++  ++V E+
Sbjct: 1069 VESLGEMPFNEFRGFRSMVREATEPYRFVDGELIEQFLNCEPELQEEIVNSVGMMNVHEV 1128

Query: 764  CKRVEELTRLH 774
               +E L RLH
Sbjct: 1129 KVMIEALRRLH 1139


>gi|171691144|ref|XP_001910497.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945520|emb|CAP71632.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1158

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 236/814 (28%), Positives = 406/814 (49%), Gaps = 61/814 (7%)

Query: 10   QLIKLNLQPD--AKGSYVEVLERYVNLGPIVDFCVVDLERQG-------------QGQVV 54
            +L +L+L  D  A   ++ +++   N+GPI+DF V+D+  +G             Q ++V
Sbjct: 357  RLFQLDLSADKPADKPFLTLIQTISNIGPIMDFAVMDMGNRGGEDSQLGNEYSSGQARIV 416

Query: 55   TCSGAYKDGSLRIVRNGIGINEQASVEL----QGIKGMWSLRSSTDDPFDTFLVVSFISE 110
              SG YKDGSLR VR+G+G+ E   + L    Q ++G++SLR +  +     L VSF++E
Sbjct: 417  CGSGVYKDGSLRSVRSGVGL-EDVGLLLEDLGQHVRGVFSLRGAVGEGKMDTLAVSFLTE 475

Query: 111  TRILAMNLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEW 169
            TR+   + E  +EE  +  GF    QTL   +     ++QVT+  V L+ + S      W
Sbjct: 476  TRVFKFDSEGGVEEVGDFMGFGLDCQTLLARNLGGGMILQVTTRGVVLIDAESGVTVATW 535

Query: 170  KSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL--EYEISCLDINPIG 227
                  ++  A+AN   +LL+  G  LV +      L  VK   +  + +++C+ + P  
Sbjct: 536  VPRDENTIINASANGEWLLLSVEGTGLVSISTAGNELRLVKEKDISQQDQVACIHVAP-- 593

Query: 228  ENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC--AFEGIS- 280
                   I  VG WT  +V I  L  L  +  E L        IPR V+L   A   +S 
Sbjct: 594  ---QLQGIGVVGFWTSGTVSIIDLNTLEPMHGESLRQSQDDASIPREVVLVQVASPKVSG 650

Query: 281  -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT--HVFAASDRPT 337
              L  A+ DGH++ F ++    E + +K+V LGT+   L      N +   + A ++ P+
Sbjct: 651  PTLFIAMEDGHVVTFNISADF-EFSGKKQVILGTRQARLHLLPQDNDSIYSILATTEHPS 709

Query: 338  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL 397
            +IY    +++YS V  +E   +CPF++ AFPDS+ +A + ++ I  ID  ++ H+R +P+
Sbjct: 710  LIYGEENRIVYSAVTAEEAMFICPFDTEAFPDSIIVATDTQIKISKIDRTRRTHVRELPM 769

Query: 398  GEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYGC 455
            GE  RRI +  + + F + C  ++    +E      RL+D+  F+ +  T+ L+   Y  
Sbjct: 770  GEMVRRIAYSPKEKVFGLGCIKRSLVDGDEVVQSSFRLVDEVIFQPVGKTFQLERTNYVE 829

Query: 456  SILSCSFSDDSNVY------YCVGTAYVLPEENEPT----KGRILVFIVEDGK-LQLIAE 504
             + +   ++  + Y      + VGT++ LP+ +       +GRILVF ++D K   LI  
Sbjct: 830  LVEAVVRAELPDSYGNPAERFIVGTSF-LPDPDYAMTGEHRGRILVFGIDDNKDPYLILS 888

Query: 505  KETKGAVYSLNAFNG-KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 563
              TKG    L   +G K++A + + + + ++      T  L     +      + +  +G
Sbjct: 889  HLTKGVCRCLEVLDGNKIVAGLAKTVAIARYDETSTTTATLTRLASYKPSTHPIQIAAQG 948

Query: 564  DFIVVGDLMKSISLLIY-KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            + I V D+MKS++L+ Y   ++  + E AR + +   +A+  +D D +L A++  NL  +
Sbjct: 949  NIIGVADVMKSMTLVEYMPGDKDRLVEVARHWQSAAGTALCHVDGDDWLEADDQGNLMML 1008

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVI 681
            R+N++    E+R  + V  E +LGE VNR R     +R+  S     +P    GTVNG I
Sbjct: 1009 RRNADAVVMEDRKIMSVTAEMNLGEMVNRIR----AVRVETSRGAMVVPRAFLGTVNGGI 1064

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIES 740
             +  ++  E    L + Q  L +V+   G +    +R+F N E++  +   FLDG+L+E 
Sbjct: 1065 YMFGTVAPEAQDLLLRFQEKLARVVHTAGEIEFNCYRAFRNAEREGSEPVRFLDGELLER 1124

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            FLD       EI + +  S+E +   VEEL R+H
Sbjct: 1125 FLDQDEATQREICEGLGPSLEHMRNVVEELRRMH 1158


>gi|238491136|ref|XP_002376805.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
            NRRL3357]
 gi|220697218|gb|EED53559.1| UV-damaged DNA binding protein, putative [Aspergillus flavus
            NRRL3357]
          Length = 1117

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 238/791 (30%), Positives = 401/791 (50%), Gaps = 50/791 (6%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            GS+ E+++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+
Sbjct: 339  GSF-EIIQALSNIAPILDFTIMDLGNRTSESQTHEFSSGQARIVTGSGAFDDGTLRSVRS 397

Query: 71   GIGINEQASV-ELQGIKGMWSLR-SSTDDPFDTFLVVSFISETRILAMNLEDELEETE-I 127
            G+G+ E   + +++ I  +W L+  +  D  DT L+V+FI ETR+   + + E+EE +  
Sbjct: 398  GVGMEELGVLGDMEHITDLWGLQVQAGGDTLDT-LLVTFIDETRVFHFSPDGEVEELDHF 456

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             G      TL   +    +++QVT   V +       +  EW  P    +  A+AN   +
Sbjct: 457  LGLSLSENTLLAANLPRGRILQVTEQRVLIADLEGGMVVYEWTPPNELVITAASANDDSL 516

Query: 188  LLATGGGHLVYLEIGD--GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +L  GG  +  L+IG    ++TE K    + ++S + +       S +++  VG      
Sbjct: 517  VLVIGGELMTVLDIGTEAQVITEKKFGA-DSQVSGVTVPA-----SPTEVCVVGFPQLAK 570

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V +  L DL  +    LG  GE  PRSVL+     +    L  ++ DG ++ +       
Sbjct: 571  VSVLRLRDLTEVHTTSLGPAGEAFPRSVLVADVLADSPPTLFISMADGSVITYSFKTDDY 630

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             L+   K+ LG++  T +     +  + VFA  + P++IY S  +++YS VN +  S +C
Sbjct: 631  SLSHMNKLILGSEQPTFKKLPRGDGLYNVFATCENPSLIYGSEGRIIYSAVNSEGASRVC 690

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +G   RR+ +    + F I +++ 
Sbjct: 691  HFNSEAYPGSIAVATLHELKIALVDRERTTQIQTLQIGATVRRVAYSPSEKAFGIGTIER 750

Query: 421  QSCAEESEMHFVR--LLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YY 470
            +  A+ +E+   R  L D+  F  + ++ L   E   S++   F    D N        +
Sbjct: 751  K-LADGAEIVTSRFMLADEVLFRQLDSFELRPEEIVESVIRAEFPAGKDENGREMTKDRF 809

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGTAY+  E  E  +GRIL+F +++G KL  +AE   KGA  +L     K++AA+ + I
Sbjct: 810  VVGTAYLDDEGEESIRGRILMFEIDNGRKLTKVAELPVKGACRALAMLGDKIVAALVKTI 869

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG---- 585
             +YK +  + GT +L+           + V   G+ IVV DLMKS+ LL +K  E     
Sbjct: 870  VIYKVVNNNFGTMKLEKLASFRTSTAPVDVTVVGNVIVVSDLMKSVCLLEFKEGENGLPD 929

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            ++ E AR +   W + V  +D D +L ++   NL  +R+N  G  +++R RLEV  E  L
Sbjct: 930  SLTEVARHFQTVWATGVACIDKDTFLESDAEGNLIVLRRNLAGVEEDDRRRLEVTSEISL 989

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR R  + + +L  + V   P    GTV G I + A +  E   FL +LQ  +   
Sbjct: 990  GEMVNRIRPVN-IQQL--ASVTVTPRAFLGTVEGSIYLFAIINPEHQDFLMRLQATMAGK 1046

Query: 706  IKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEEL 763
            ++ +G +   ++R F +  ++  +   F+DG+LIE FL+      +EI  ++  ++V E+
Sbjct: 1047 VESLGEMPFNEFRGFRSMVREATEPYRFVDGELIEQFLNCEPELQEEIVNSVGMMNVHEV 1106

Query: 764  CKRVEELTRLH 774
               +E L RLH
Sbjct: 1107 KVMIEALRRLH 1117


>gi|295667673|ref|XP_002794386.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226286492|gb|EEH42058.1| DNA damage-binding protein 1a [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1195

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 231/809 (28%), Positives = 397/809 (49%), Gaps = 56/809 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
            QLI++      +GS+ EV++ + N+ PI+DF ++DL     E Q      GQ ++VT SG
Sbjct: 399  QLIRIT-----EGSF-EVIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTGSG 452

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            A+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ E+R+    
Sbjct: 453  AFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDESRVFHFT 512

Query: 118  LEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             + E+EE  E  G      TL   +    +++QVT  +VR+       L   W  P   +
Sbjct: 513  QDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPSQKA 572

Query: 177  VNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            +  A++N   ++L  GG  L+  +I G+  L   K    + ++S + +     +P+   I
Sbjct: 573  ITAASSNDDHLVLVVGGQVLMCFDIQGEIKLAGKKDFGDDTQVSGVTV---ASSPATYCI 629

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHL 291
              +    +++V   SL D+ +     +G  GE  PRSVL+        + L  ++ DG +
Sbjct: 630  LCLPQTAEVAV--MSLADMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSMADGGV 687

Query: 292  LNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
             +F  N     LT   K+ LG+ QP   +        ++FA  ++P++IY++  +++YS 
Sbjct: 688  FSFSFNADEFTLTKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGRIIYSA 747

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            V+  + S +C FNS A+P S+A+A   EL I  +D  +   I ++ +GE  RR+ +    
Sbjct: 748  VHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIGETVRRVAYSAAE 807

Query: 411  RTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----S 463
            + F I ++K   ++ AE     F+ L D+  F  +  Y L   E   S++   F     S
Sbjct: 808  KAFGIGTIKRTLENGAEVITSRFM-LADEIMFRELDDYSLRPDELVESVIQAQFPEGKDS 866

Query: 464  DDSNVY---YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            D +  +   + VGT+Y+        +GRIL F V   + L  +AE   KGA  +L     
Sbjct: 867  DGNESFKDMFVVGTSYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVMQD 926

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            K++AA+ + + +Y     +     L     +      + +   G+ I V DLMKS+S++ 
Sbjct: 927  KIVAALMKTVVIYSIAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIE 986

Query: 580  YKHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            +K  E     ++ E AR +   W +AV  + ++++L ++   NL  + +N  G TD+++ 
Sbjct: 987  FKQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNQNVNGVTDDDKR 1046

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---PTVIFGTVNGVIGVIASLPHEQY 692
            RLEV  E  LGE VNR R  S+   LP +   +    P    GTV G I +   +     
Sbjct: 1047 RLEVTSEILLGEMVNRIRPVSIQGSLPATGPREAVISPKAFLGTVEGSIYLFGLINPAYQ 1106

Query: 693  LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDE 751
              L +LQ+ +  ++   G +   ++R+F N  ++  +   F+DG+LIE F        +E
Sbjct: 1107 DLLMRLQSAMAGLVVTPGAMPFNKFRAFKNAVRQAEEPYRFVDGELIERFWTCEAALQEE 1166

Query: 752  I------SKTMNVSVEELCKRVEELTRLH 774
            I           V+VE+  + VEEL R+H
Sbjct: 1167 IVGLVVAGGVAGVTVEKTKRIVEELRRMH 1195


>gi|67516629|ref|XP_658200.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|40747539|gb|EAA66695.1| hypothetical protein AN0596.2 [Aspergillus nidulans FGSC A4]
 gi|259489136|tpe|CBF89158.1| TPA: damaged DNA binding protein (Eurofung) [Aspergillus nidulans
            FGSC A4]
          Length = 1132

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 227/784 (28%), Positives = 392/784 (50%), Gaps = 49/784 (6%)

Query: 26   EVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRNGIGI 74
            +V++   N+ P++DF ++DL     E Q      GQ ++VT SGA+ DG+LR VR+G+G+
Sbjct: 363  QVIQTLSNIAPVLDFTIMDLGNRTSENQMHEFSSGQARIVTGSGAFDDGTLRSVRSGVGL 422

Query: 75   NEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IEGFCS 132
             E   + +++ I  +W L+  +   F   L+V+F++ETR+   + + E EE E   G   
Sbjct: 423  EELGVLGDMEHITDLWGLQVGSRGDFLDTLLVTFVNETRVFRFSPDGEAEELESFLGLSL 482

Query: 133  QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATG 192
               TL   +   ++++QVT   V +          EW       +  A+AN   ++L  G
Sbjct: 483  SENTLLAANLPGSRILQVTEQRVLIADIECGMTIFEWTPKNQLIITAASANDDTIVLVAG 542

Query: 193  GGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            G H+  L+I  +  +   K    + +IS + +       + + +  VG      V +  L
Sbjct: 543  GKHVTVLDIQSEARVVSEKDFGADNQISGVTLPT-----TPTDVCIVGFPQLAKVSVLKL 597

Query: 252  PDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
             DL+ I+   LG  GE  PRSVL+ +   E    L  ++ DG ++ +  N +   L+   
Sbjct: 598  QDLSHISSTSLGPAGEAFPRSVLVASVLAENAPTLFISMADGSVITYDYNDQDHSLSGMN 657

Query: 308  KVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            K+ LG++  T +     N  ++VFA  + P++IY S  +++YS VN +  S +C FNS A
Sbjct: 658  KLVLGSEQPTFKKLPRGNGLSNVFATCENPSLIYGSEGRIIYSAVNSEGASRICHFNSEA 717

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCA 424
            +P+S+A+A   EL IG +D  +   I+++P+    RR+ +    + F + +++ +  S  
Sbjct: 718  YPESIAVATAQELKIGLVDKERTTQIQTLPIKATVRRVAYSPSEKAFGMGTIERKLVSGE 777

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC--------SFSDDSNVYYCVGTAY 476
            E  +  FV L D+  F  +  + L+    G  I+ C        S   ++   + VG+AY
Sbjct: 778  EIVKSQFV-LADEILFRRLDAFDLE----GEEIVECVIRAEAPESKDGEAKDRFVVGSAY 832

Query: 477  VLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            +  ++ + T G I VF V++G KL  +A++  KGA  +L     K++AA+ + + +++ +
Sbjct: 833  LGEDDGDSTLGYIRVFEVDNGRKLAKVAQERVKGACRALAVMGDKIVAALVKTVVVFQVV 892

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH-EEGAIE---ERA 591
             R  G  +LQ    +      + +    + I + DLMKS+ ++ Y   E GA +   E A
Sbjct: 893  PRSGGL-QLQRLASYRTSTAPVDITVTRNVIAIADLMKSVCVVEYHEGENGAPDKLVEVA 951

Query: 592  RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
            R +   W + V  +  D YL ++   NL  +R+N  G  +++R RLEV GE  L E VNR
Sbjct: 952  RHFQTVWATGVTSVAPDTYLESDAEGNLIVLRRNRSGVEEDDRRRLEVTGEICLNEMVNR 1011

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 711
             R  + + +LP + V  +P     TV G I + A +  +   FL +LQ  +      +GG
Sbjct: 1012 IRPVN-IQQLPSATV--VPRAFLATVEGSIYLYAIINPDYQDFLMRLQATMASRADSLGG 1068

Query: 712  LNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +    +R+F    ++  +   F+DG+LIE FL        EI   +  S+EE+   VE L
Sbjct: 1069 IPFTDYRAFRTMTRQATEPYRFVDGELIERFLTCEPAVQKEIVDIVGSSLEEVRAIVEAL 1128

Query: 771  TRLH 774
             RLH
Sbjct: 1129 RRLH 1132


>gi|393212467|gb|EJC97967.1| hypothetical protein FOMMEDRAFT_162310 [Fomitiporia mediterranea
            MF3/22]
          Length = 1161

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 222/779 (28%), Positives = 376/779 (48%), Gaps = 58/779 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QLI++  +  + GSY+E+ + + N+ PI+D    D +  GQ  ++TCSG    GSLR++R
Sbjct: 357  QLIRVTSERSSNGSYLEISDTFKNIAPIMDAVFEDTDDSGQPTIITCSGGESTGSLRVIR 416

Query: 70   NGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM-NLEDELEETEI 127
            NG   NE A +E +  I GMW +R   DD F  +++V+  + T +L + N + E   +  
Sbjct: 417  NGANFNEDARIEGIANITGMWPIRRQYDDTFHHYMLVTTDTNTHLLELPNSQQETAVSRS 476

Query: 128  EGFCSQT---QTLFCHDAIYNQLVQ--------------VTSGSVRLVSSTSRELRNEWK 170
              F   T   +TL   + +   + +              V+  SV L+++ +    ++W 
Sbjct: 477  NDFSDLTIDSRTLVAGNMLTRLMSESGKSEYVSSSYVVQVSRDSVILLNTRTGLREDQWS 536

Query: 171  SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL------EYEISCLDIN 224
              PG  + +A  + SQ+ +A  GG +V L +    + E    Q         EIS L I+
Sbjct: 537  PGPGNKIVLADISPSQICVAISGGTVVLLNLFADKINEQSRKQFYSPDGSSSEISALSIS 596

Query: 225  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF-----EGI 279
            P+    ++S   A+G W+   V++  LP    I    +    +PRS+LLC F     +  
Sbjct: 597  PMKRGANFSSFVALGFWSSHEVKVLRLPTFEQIDAVPVVMPHLPRSLLLCDFSEEESKPH 656

Query: 280  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 339
             YL+  L +G +++     K G L ++K   LG  P++L      +   VFA+  R  + 
Sbjct: 657  RYLMVGLANGTVVSMPFAEK-GVLGEKKFFGLGGAPVSLSRCEVNDKPAVFASGARSALF 715

Query: 340  YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG- 398
            Y S   L +S V +K+V+     +S +F  S+A++    L +G + ++ KLHIR++ +G 
Sbjct: 716  YRSKDTLSHSPVLIKDVTFASAIHSESFTSSMALSTLDGLVVGRVLELDKLHIRTVFMGK 775

Query: 399  EHPRRICHQEQSRTFAICSLK------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFE 452
            E+P ++ +   ++   +  LK        +    S    V  +D +T   IS  P +   
Sbjct: 776  ENPTKLAYHSAAKLLGVGCLKLDRSTFKGAPVAASSFKLVDTVDFRTTHEISLEPNEEIT 835

Query: 453  YGCSI-LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ---LIAEKETK 508
                + L C    D+  ++ VG+ Y    E EP++GRIL+      + Q   ++A  E K
Sbjct: 836  AVALVSLDCGIGWDT--FFAVGSVYFDETEREPSRGRILIISTGSKRNQTPHILASTEVK 893

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
            GAV +L    GKL+ AIN  + +++    D+      +   H+  ++   V    D IV+
Sbjct: 894  GAVNALTCIQGKLVVAINTSVDVFRLKHGDNTVLTAVTSWNHNYLVITAVVM--DDLIVI 951

Query: 569  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 628
            GD + S+++L  K E+  +   ARDY+  W   +   D+   +GA N+ NLF+ R   +G
Sbjct: 952  GDAVSSLAVL--KLEDDKLTTFARDYSPLWPLCIGAFDNKTVIGANNDNNLFSYRLQKQG 1009

Query: 629  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 688
            +    +  L+  G Y++ E VN+   G      P+    Q   ++F T  G I V+ ++ 
Sbjct: 1010 S----KMLLDQDGLYNIEEIVNKCVPGCF-DSTPNKFGLQTKQLLF-TSTGRIAVVVNVE 1063

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK----NFLDGDLIESFLD 743
             +    L  L+ N+  VIKG G L+H  WR+ +N +   DA      FLDGDL+E FLD
Sbjct: 1064 DDLSRLLSSLERNMAGVIKGPGDLDHTLWRAPSNSRGRSDANGAATGFLDGDLLERFLD 1122


>gi|449549048|gb|EMD40014.1| hypothetical protein CERSUDRAFT_63520 [Ceriporiopsis subvermispora B]
          Length = 1265

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 238/797 (29%), Positives = 381/797 (47%), Gaps = 84/797 (10%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            KG ++EVL+ + N+ PIVD  + DL+  GQ Q++TCSG    G+L++VR G    E A V
Sbjct: 450  KGQFIEVLDTFQNIAPIVDAVLADLDDSGQSQIITCSGGRNSGALKVVRTGADFQELARV 509

Query: 81   E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE--TEIEGFCSQTQTL 137
              + GI  +W +RS  +   D+ LV S  +ET +   +  D + +  +  +GF +   TL
Sbjct: 510  NGITGITSLWPVRSRFEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADGFITTAPTL 569

Query: 138  FCHDAIY-----------------NQLVQVTSGSVRLVSSTSR----ELRNEWKSPPGYS 176
               +                    + ++QVT   + L+   +      L  E   P    
Sbjct: 570  AAANIPRRVSTNAGGRVSSSYVDSSLVIQVTPEMITLLEYDAALGLFSLVGEGWDPKSQG 629

Query: 177  -------VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQL-------EYEISCLD 222
                   +  A  NASQ+++   GG +  L + D    +V+ ++          ++S + 
Sbjct: 630  AIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRGFADPVYGPLDVSAVS 689

Query: 223  INPIGENPSYSQIAAVGMWTDISVRIFSLP--DLNLITKEHLGG-EIIPRSVLLCAF--- 276
              P     +++   AV  W    V+I S+   D  L T   + G   +PRSVLL  F   
Sbjct: 690  CVPFDRTKNFATNIAVAFWGTNKVQILSISSQDATLATVCEVSGLPSLPRSVLLHNFGTG 749

Query: 277  ------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVF 330
                  +   ++L  L DG +++F  ++   EL ++K  SLG  P++L          VF
Sbjct: 750  RTKKEPDFHPHVLVGLVDGSVISF--SVVENELKEKKVFSLGIAPVSLSRCEVDGKITVF 807

Query: 331  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 390
            A   R +V+Y   ++L  S V +K+++     N++ F  SL +A    L IGTI  + K+
Sbjct: 808  AVGSRTSVLYWDKQRLTNSPVMIKDMAVGTSLNTSYFRSSLVLAASSGLIIGTIRGVDKM 867

Query: 391  HIRSIPLG-EHPRRICHQEQSRTFAI-C--SLKNQSCAEESEMHFVRLLDDQTFEFISTY 446
             IRSIP G   PRRI +  + + F + C  ++  +    +      +++D  TF  +  +
Sbjct: 868  QIRSIPFGLSDPRRIAYHSRLKLFGVGCNRTMPLRPGEFQGTTSSFKIIDATTFNGLWDF 927

Query: 447  PLDTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV--------EDG 497
             L   E   S+++    +D  +  +CVGT +   EE EPT GR+L+F +         DG
Sbjct: 928  ELQANEEVSSVMALPDGTDGRSPCFCVGTVFFEVEETEPTSGRLLLFAIGSDGATSSADG 987

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR-ELQSECGHHGHILA 556
            +L+L+  ++ KG V+ + + N  + AAIN  + L+   LRD   +  LQ     + +   
Sbjct: 988  ELRLVTTQDVKGCVFQITSVNNFIAAAINSNVVLFA--LRDTNKQYALQQVADWNHNYFV 1045

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
              + + GD ++VGD + S+SLL  +     IE  +RDY+  W  AVE   ++  +GA ++
Sbjct: 1046 TNLASHGDRLIVGDAISSVSLL--RVSVARIECLSRDYSPLWPVAVEATAENQIIGANSD 1103

Query: 617  FNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVI 673
             NLF+   ++ +G     R  LE  G YHL + VN+F  G LV    DS  G    P  +
Sbjct: 1104 CNLFSFALQHIDG-----RKVLERDGSYHLDDIVNKFAPGGLVAA--DSSTGYTLRPRQL 1156

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK--- 730
            F + +G IGVI  +  E  L L  LQ N+ K IKG G  NH +WR+  N +   DA+   
Sbjct: 1157 FFSSSGRIGVIIDVDDELSLPLTSLQMNMAKRIKGPGDTNHTEWRAPTNARGRTDAEASA 1216

Query: 731  -NFLDGDLIESFLDLSR 746
              FLDGD IE FL   R
Sbjct: 1217 FGFLDGDFIEQFLTHPR 1233


>gi|46121747|ref|XP_385428.1| hypothetical protein FG05252.1 [Gibberella zeae PH-1]
          Length = 1161

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 211/811 (26%), Positives = 408/811 (50%), Gaps = 60/811 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL ++N+  D K + +  ++ + N  PI+DF ++D+  +            GQ ++V   
Sbjct: 365  QLYQINI--DTKAAML--VQSFSNNAPILDFSIMDMGNREGDTQSGNVFSSGQSRIVAGC 420

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GAY+DG+LR +R+G+G+ ++  + EL+G +G+++L S   +  DT LVVS I+ETRIL+ 
Sbjct: 421  GAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGSEMVDT-LVVSSITETRILSF 479

Query: 117  NLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            + E  +EE    +G    ++TL   +    QL+Q+T  SV L+        ++W  P G 
Sbjct: 480  DFEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDVPDGK 539

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY-----EISCLDINPIGENP 230
            ++  A+AN+   LL+  G  LV L +   +    +    +      +ISC  I+   ++P
Sbjct: 540  TITRASANSKWALLSVDGTSLVSLNLLQNLAVNAQQINNDSTSQPDQISC--IHAARDSP 597

Query: 231  SYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----L 282
                +  VG W+   + +  +  L  +  E +        +PR V L            L
Sbjct: 598  ---DLGVVGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPRDVALVQLHPPDISGPTL 654

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYS 341
            L A+ DG+++ F ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  ++IYS
Sbjct: 655  LVAMEDGNIVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHASLIYS 714

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHP 401
            S  ++++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  
Sbjct: 715  SEGRIIFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLTHVKALPVNETV 774

Query: 402  RRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLD---TFEYGCS 456
            RR+ +    + F + S+K +    EE      RL+D+  F E  S +PL+   T E    
Sbjct: 775  RRVAYSPGLKAFGLGSIKRELVNNEEVVTSSFRLVDEIVFKELGSPFPLNGSSTLELVEC 834

Query: 457  ILSCSFSD---DSNVYYCVGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEKETKG 509
            ++     D   +    + VGT+++     E+   T GRILV  V+ + ++  I     KG
Sbjct: 835  VIRAELPDVGGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSHNLKG 894

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
                L      ++A +++ + +Y +      +  LQ    +    + + +   G+ I VG
Sbjct: 895  PCRCLGMIEDNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNMIGVG 954

Query: 570  DLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            DLM+S+SL+ +       +  ++ERAR + + W +AV  ++ + +L A++  NL  +++N
Sbjct: 955  DLMQSLSLVEFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRN 1014

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVI 684
                T+++R R+E+  E  +GE +NR R     + +P ++   + P     +  G + + 
Sbjct: 1015 VNAPTEQDRRRMEITSEMGIGEQINRIRK----LNVPAAENNIVHPRAFLASAEGSLYLY 1070

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLD 743
              +  +    L   Q+ + + +  +G +  + WRSF N+ +  +    F+DG++IE FLD
Sbjct: 1071 GDIAPQYQDLLMTFQSRMEECVLALGNVEFKLWRSFRNDNRESEGPYRFIDGEMIERFLD 1130

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +   + + +   +  +VE++   +EEL R+H
Sbjct: 1131 MGEEQQELVCDGLGPTVEDMRNMIEELRRMH 1161


>gi|390603312|gb|EIN12704.1| hypothetical protein PUNSTDRAFT_97523 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1268

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 248/816 (30%), Positives = 379/816 (46%), Gaps = 89/816 (10%)

Query: 14   LNLQPDAK-----------GSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            +++ PDA+           GSY+EVL  Y NL P+ D  +++ +  GQ Q+VTCSG    
Sbjct: 451  IDVDPDAQSGRKGKVVRSDGSYLEVLATYQNLAPVTDALLMNADGSGQPQIVTCSGGANA 510

Query: 63   GSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            GSL++VR G      A VE L G   +W +R    D  D+++V S +  T++L +   D 
Sbjct: 511  GSLKVVRKGADFKTAAVVESLPGTVSVWPVRKRYYDNTDSYIVASTLRCTQVLLLEEHDT 570

Query: 122  LEE--TEIEGFCSQTQTLFCHDAIYNQLV-------------QVTSGSVRL-----VSST 161
            +         F +   T+   + +  +LV             QVT   +RL     +   
Sbjct: 571  VNPLVAASTDFATSGPTISVANILRRRLVNGKSEYEDSSLVVQVTPSKMRLLEHDMIGPV 630

Query: 162  SRELRNEWK-SPPG-YSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEI 218
               L + WK S PG   +  A+ N +Q+ L   GG L    +      +++  Q    +I
Sbjct: 631  EFRLVDTWKPSGPGPQEIVTASINPTQIALGLRGGRLCVFRLAPNDHFDLRFTQHFSNDI 690

Query: 219  SCLDINPIGENPSYSQIAAVGMWTDISVRIF----SLPDLNLITKEHLGGEIIPRSVLLC 274
            S +   P+      S   AVG W   +V I     ++ +L L T        +PRS+LL 
Sbjct: 691  SAVSCLPLNPGNLISAFIAVGFWGSNNVMILCQKGNILELELQTDPL---PALPRSLLLY 747

Query: 275  AFEGISY----------LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 324
             F G S+          LL  L DG L+++    K  EL D+K V LG  P++L    + 
Sbjct: 748  NF-GTSFGKKDPNYHAHLLIGLADGSLVSYAYARK--ELKDKKVVPLGASPVSLVPCEAN 804

Query: 325  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 384
                +F    R  V+Y    +L  +   LK V   CP NS +F  S  +      TIG  
Sbjct: 805  GKKAIFCCGTRAAVVYWDRDRLQNAPALLKNVVTACPLNSTSFEQSTILVTGSGFTIGHF 864

Query: 385  DDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCA----EESEMHFVRLLDDQT 439
             ++  LH+RS+PLG + P+RI +  +S    +  ++ +       E +     RLLDD +
Sbjct: 865  GNVAGLHVRSVPLGVDVPKRITYNNESHLLGVACIRKEPHRIGDDEGTIRSSFRLLDDTS 924

Query: 440  FEFISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTA-YVLPEENEPTKGRILVFIVED 496
            F  +  + L+  E      +LS   ++    ++C+GTA +   ++ E +KGR++VF    
Sbjct: 925  FGELDRFDLEADEDITSAVVLSLGTAEAYTSHFCIGTADFTSDDQLEVSKGRLVVFDPST 984

Query: 497  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT-----RELQSECGHH 551
              L  +A  +  G VY+L +  G + AA+N  + +Y+  L  DG      R +Q    +H
Sbjct: 985  KVLSPVATLDVNGCVYALASIQGLVAAAVNSAVIVYR--LETDGPTFSSKRLVQLANWNH 1042

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
             + +   V TRG  I VGD + S+S+L    +  A++  ARDY   W  A+E    D  +
Sbjct: 1043 NYFVTNLV-TRGSRIFVGDAISSVSILELTGQ--ALQTVARDYGPLWPVAIESTGPDSVI 1099

Query: 612  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-- 669
            GA+  FNLFT + +         G+LE  G YHLGE VN+F  G L+   P         
Sbjct: 1100 GADGEFNLFTFKLS--------EGKLERDGSYHLGEQVNKFVPGGLLAADPAHTTQTTCK 1151

Query: 670  PTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
            P     T +G I  VI  L  E  L L  L  N+ KVI G+ G+ +E WRS    +   D
Sbjct: 1152 PIQTLFTSSGRIAIVIDVLDPEVSLHLTNLHRNMSKVITGLTGIQNETWRSPATSRGRTD 1211

Query: 729  A---KNFLDGDLIESFLDLSRT--RMDEISKTMNVS 759
            A   + FLDGD +E+FLD+ RT   + EI +  NV+
Sbjct: 1212 AETSRGFLDGDFLEAFLDVPRTSPSLAEILEGENVA 1247


>gi|302503607|ref|XP_003013763.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
 gi|291177329|gb|EFE33123.1| hypothetical protein ARB_07875 [Arthroderma benhamiae CBS 112371]
          Length = 1148

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 228/791 (28%), Positives = 398/791 (50%), Gaps = 55/791 (6%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAYKDGSLRIVRNGIGINE 76
            ++++   N+ PI+DF V+D+  +         GQ ++VT SGA+ DGSLR VR+G+GI E
Sbjct: 371  DLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEE 430

Query: 77   QASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFCSQ 133
               +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   + + ++EE E    G    
Sbjct: 431  LGVLASMEHITDLWTLRSACPEPFFDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFS 490

Query: 134  TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGYSVNVATANASQVLLATG 192
              TL   +   N+++QVT  + R +   S  +   W+S    +++  A+AN   ++L  G
Sbjct: 491  QSTLLATNIPGNRILQVTESTSRAIDVDSGMII--WRSSYEEFTITSASANDDYLVLVLG 548

Query: 193  GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP 252
            G  LV + +    L   +  + + ++S + I       S +Q   V +     + I +LP
Sbjct: 549  GVRLVCISLSTFELVGSRDFEADNQVSGMTIPA-----SPTQACIVCLPQSAEIIILNLP 603

Query: 253  DLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
            +L +  K+ LG  GE IPRSV++          L  ++ DG + +F  ++    + +  K
Sbjct: 604  ELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFVSMADGTVFSFSFDVHAFAIFNSSK 663

Query: 309  VSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            ++LG++  + +     N  + VFA  D P++I++S  +++YS V+    S +C  N+ A+
Sbjct: 664  ITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNTQAY 723

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAE 425
            P S+A++ + EL I  +D+ +   I ++P+    RR+ +    + F + ++K +  +  E
Sbjct: 724  PGSIALSSQNELKIAIVDEERTTQIHTLPMHASVRRLAYSPMEKAFGLGTVKRKISNGVE 783

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFE-----------YGCSILSCSFSDDSNVYYCVGT 474
            E    FV L D+  F  +STY L   E           YG   +  S S D    + VGT
Sbjct: 784  EVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNYGKDEVGNSISKD---LFFVGT 839

Query: 475  AYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLY 532
            A++    ++  +GRIL+F V   + L LI EK   GA  +L   +  LL A + + + ++
Sbjct: 840  AFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLAVMDHTLLVAGLVKSVSVF 899

Query: 533  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-KHEEG----AI 587
            K      G   L+    +      + +   GD + V D+MKS+SL+ Y + EEG      
Sbjct: 900  KLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQYTQAEEGEQEPKF 959

Query: 588  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
            EE AR Y   W +AV  +++++YL A+   NL  +++N  G T+ +R RL+   E  LGE
Sbjct: 960  EEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDRKRLQPTSEIRLGE 1019

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIK 707
             VNR  H  +V    ++ V     ++   V+G I +   +       L +LQT +  +  
Sbjct: 1020 MVNRI-HPIVVQTHTETAVSA-RALLATQVDGSIYLFGLINPAYIDLLLRLQTAMGSITI 1077

Query: 708  GVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMN---VSVEEL 763
              G +   ++R+F    +  D    F+DG+LIE FL  +    +EI   ++   V+V  L
Sbjct: 1078 SPGEIPFPKYRAFRTTVRQSDEPFRFVDGELIERFLSCTPAMQEEIVGRLDDSTVTVSSL 1137

Query: 764  CKRVEELTRLH 774
             + +EEL R+H
Sbjct: 1138 KEMIEELRRMH 1148


>gi|261193401|ref|XP_002623106.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
 gi|239588711|gb|EEQ71354.1| UV-damaged DNA binding protein [Ajellomyces dermatitidis SLH14081]
          Length = 1168

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 229/798 (28%), Positives = 388/798 (48%), Gaps = 68/798 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCS 57
            QLI++      +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT S
Sbjct: 406  QLIRIT-----EGSF-EVIQTFANIAPILDFTIMDLGGRAMGESQTHEFSSGQARIVTGS 459

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GA+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+   
Sbjct: 460  GAFNDGSLRSVRSGVGMEEVGVLGSMEHITDLWALRVACPEEFSDTLLVSFVDETRVFYF 519

Query: 117  NLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
              +  +EE  E  G      TL   +    +++QVT  +VR+       +  EW      
Sbjct: 520  TPDGGVEEKDEFMGLGLTESTLIAANLPNGRILQVTERNVRVAELDGGMVMWEWSPVSQK 579

Query: 176  SVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 234
            ++  A++N   ++L  GG  L+  +I G+  +   K   ++ ++S + +     +P+ S 
Sbjct: 580  AITAASSNDDHLVLMVGGQVLMIFDIRGEIKVAGEKDFGVDTQVSGVTVT---ASPARSC 636

Query: 235  IAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGH 290
            I  +    ++ V   SL DL +     LG  G+ +PRSVL+        + L  ++ DG 
Sbjct: 637  ILCLPQTAEVIV--MSLADLTIRHSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGS 694

Query: 291  LLNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
            + +F  N     LT   K++LG+ QP   +        +VFA  ++P++IYS+  +++YS
Sbjct: 695  VFSFSFNATDFSLTSMSKITLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYSAEGRIVYS 754

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQ 409
             VN  + S +C FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +   
Sbjct: 755  AVNSDQASRICHFNSEAYPASIALATPSELKIALVDAERTTQIQTLEVGETVRRVAYSAP 814

Query: 410  SRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 467
             R F I ++K   +  AE     F+ L D+  F  +  Y L+  E   S++   F DD +
Sbjct: 815  ERAFGIGTIKRTLEDGAEVIASRFM-LADEIMFRELDVYDLNKDELVESVIRAQFPDDKD 873

Query: 468  VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
                             ++G  L+       L ++AE   KGA  +L     K++AA+ +
Sbjct: 874  -----------------SEGEELM-----KDLFIVAEMPVKGACRALAIVQDKIVAALMK 911

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE---- 583
             + +Y           L     +      + +   G+ I V DLMKS+S++ Y+      
Sbjct: 912  TVVVYTLSKGQFADYILTKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIVEYQQGTDGL 971

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
             G++ E AR +   W +AV  +  D +L ++   NL  +R+N  G T+++R RLEV  E 
Sbjct: 972  SGSLTEVARHFQTLWSTAVAPVAQDTWLESDAEGNLVVLRRNVNGVTEDDRRRLEVTSEV 1031

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
             LGE VNR R  ++   L  ++    P    GTV G I +   +       L +LQ+ + 
Sbjct: 1032 LLGEMVNRIRPVNIQASL-GTEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMA 1090

Query: 704  KVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTM 756
             ++   GG+   ++R+F N  ++  +   F+DG+LIE FL       +EI          
Sbjct: 1091 GMVVTPGGMPFNKFRAFRNTVRQAEEPYRFVDGELIERFLGCGAELQEEIVGKVIADGVA 1150

Query: 757  NVSVEELCKRVEELTRLH 774
             V+VE +   VEEL R+H
Sbjct: 1151 GVTVERVKAIVEELKRMH 1168


>gi|326426696|gb|EGD72266.1| hypothetical protein PTSG_00286 [Salpingoeca sp. ATCC 50818]
          Length = 1104

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 205/793 (25%), Positives = 390/793 (49%), Gaps = 44/793 (5%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            Q++KL    D +   + VL+ + N+G ++D C +     G+ ++VT SGA KDGSLR+++
Sbjct: 328  QVVKLETDDDNQNKII-VLDTHENIGSVLDMCSLPQASFGETRLVTASGAGKDGSLRVIQ 386

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPF----DTFLVVSFISETRILAMNLEDELEET 125
             G+ I   A+V+L  ++ +W L   + +      ++FL +SF      L      + E  
Sbjct: 387  RGVNITSSATVQLDDLQRVWVLTKPSGEAEAATEESFLALSFAGGLAFL------QFEGE 440

Query: 126  EIEGF----CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            E+ GF          L C +   NQ + VT   V LV + +     EWK+  G ++  A 
Sbjct: 441  ELCGFEVPSAPSDPALLCSNVAENQWLFVTEDEVVLVCAETLARVAEWKAAEGQAIG-AC 499

Query: 182  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
            A + + L+ + G  L+  EI  G LT+ K   LE+E+SCLDI P+ ++ +   +A  G W
Sbjct: 500  ACSEKQLVVSSGRQLLIFEIAKGKLTQTKDTTLEHELSCLDILPVNDDGTSVMVA--GTW 557

Query: 242  TDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG 301
             ++  +++ LP + + +       +I  S  +      +     +GDG ++ ++    + 
Sbjct: 558  -NVEAKVYHLPSMRVASSAPFKAGVIATSCAITRLGDQNVAFFGMGDGSVVRYIFAEGSW 616

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 361
             +T+++ V  G QP++L +    +   V A S+   + Y+ + ++ +S +N   ++ + P
Sbjct: 617  HMTNQRHVHAGKQPVSLVSCKFASGPAVVALSNTSLLFYADSGRVTFSTLNEANLTCVAP 676

Query: 362  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 421
             ++ A+PDSL  +    L IG I  +  LHI  + LG  P  +     + ++ +  + + 
Sbjct: 677  LSTPAYPDSLVFSTPASLGIGQIGRMNNLHINKVALGFSPVSLTTISANPSYVVV-VGHV 735

Query: 422  SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 481
               +      +R+ D  T E ++++ L   E    ++   F DD+  Y+ +GTA+V P E
Sbjct: 736  DQEDGGIASAIRVFDGTTLEMVASHELPAPEAVNCVIQHKFKDDNTEYFIIGTAFVDPTE 795

Query: 482  NEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGK----LLAAINQKIQLYKW-M 535
             +P++GRIL+  +E+ K + ++ E E  G+VY L    GK    L+A IN ++  +K+  
Sbjct: 796  TQPSRGRILISKLENKKEIAIVHECEAAGSVYCLTKMCGKDTDDLVAGINNQVVHFKYDA 855

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
               D  ++L++  G+      + + +  D ++VGD++ ++   + +  +  ++  A    
Sbjct: 856  TGQDAAKKLRAVSGNQNFGAVVSLDSCDDIVLVGDMLNAV--FVMQKAQDKLQLVAGSQT 913

Query: 596  ANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 655
            ANW+S+  ++++ ++L A +  +L   ++  E  +  +   L    E +LGE V  F   
Sbjct: 914  ANWVSSCALVNETVFLVASHAHSLSVCQREFEPGSTMQ--TLNAKFEIYLGETVTSFVRA 971

Query: 656  SL-VMRLPDSDVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
            +L      DS +    T  +FGT+ G +  +  L   Q   L  L+  + + I G+GGL+
Sbjct: 972  ALGSAAAVDSSMPLRNTFFVFGTMGGGLACLLPLTPPQTELLTALECRMEEKIGGLGGLD 1031

Query: 714  HEQWRSFNNEKKTVDAKN--FLDGDLIESFLDLSRTRMDEISKTMN----------VSVE 761
            H ++R+  +E++     N   +DGDL+E+FL L      E+   M+          V+ E
Sbjct: 1032 HREFRTARDEQRMAQQVNPRLVDGDLVETFLQLPEEEQKELVAGMSLMGEDGRPYVVTAE 1091

Query: 762  ELCKRVEELTRLH 774
                 +E + RLH
Sbjct: 1092 VAKAALEAMARLH 1104


>gi|315039795|ref|XP_003169275.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
 gi|311337696|gb|EFQ96898.1| hypothetical protein MGYG_08821 [Arthroderma gypseum CBS 118893]
          Length = 1076

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 222/757 (29%), Positives = 382/757 (50%), Gaps = 44/757 (5%)

Query: 49   GQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSF 107
            GQ ++VT SGA+ DGSLR VR+G+GI +   +  ++ I  +W LRS+  +PF   L+VSF
Sbjct: 333  GQTRIVTGSGAFGDGSLRSVRSGVGIEDLGVLASMEHITDLWGLRSACPEPFYDTLLVSF 392

Query: 108  ISETRILAMNLEDELEETEIE--GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 165
            ++ETR+   + + E+EE E +  G      TL   +   N+++QVT  + +++   S  +
Sbjct: 393  VNETRVFHFSPDGEVEEKEDDFLGLVFSRSTLLATNIPENRILQVTESTAKVIDLDSGMV 452

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI-- 223
               W+S    S+  A+AN   ++L  GG  LV + +        +  +++ ++S + I  
Sbjct: 453  I--WQSSHNESITSASANDDYLVLVLGGIRLVCISLSTFEQVGSRDFEVDNQVSGMTIPA 510

Query: 224  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEG--I 279
            +PI       Q   V +     + I  LP L +  K+ LG  GE IPRSV++        
Sbjct: 511  SPI-------QACIVCLPQSAEIVILDLPGLEVKNKQALGEPGEAIPRSVIVAEILAGKP 563

Query: 280  SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTV 338
              L  ++ DG + +F  ++ T  ++   K++LG++  + +     N  + VFA  D P++
Sbjct: 564  PTLFVSMADGTVFSFSFDINTFTISGSSKITLGSEQPSFKKLPRGNGQYNVFATCDHPSL 623

Query: 339  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 398
            I++S  +++YS V+    S +C  N+ A+P S+A++ + EL I  +D+ +   I ++P+ 
Sbjct: 624  IHASEGRIVYSAVDSASSSRICSLNTQAYPGSIALSNQNELKIALVDEERTTQIHTLPMH 683

Query: 399  EHPRRICHQEQSRTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GC 455
               RR+ +    + F + ++K    +  EE    FV L D+  F  +STY L   E   C
Sbjct: 684  ASVRRLAYSPLEKAFGLGTVKRTISNGVEEVSSSFV-LADEIHFRPLSTYDLRPDELVEC 742

Query: 456  SILS---CSFSDDSNVY----YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKET 507
             I S   C   +  N+     + VGTA++    ++  +GRIL+F V   + L LI +K  
Sbjct: 743  VIRSQVNCGKDEVGNLMSKDLFFVGTAFLDDVGDDHIRGRILIFEVNKSRELSLIVDKSL 802

Query: 508  KGAVYSLNAFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
             GA  +L   +  LL A + + + ++K      G   L+    +      + +   GD +
Sbjct: 803  MGACRTLAVMDPSLLVAGLVKSVSVFKLARDRFGNIFLEKHTAYRTSTAPIDISVTGDTV 862

Query: 567  VVGDLMKSISLLIYK-----HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
             V D+MKS+SL+ Y       +E   EE AR Y   W +AV ++++ +YL A+   NL  
Sbjct: 863  AVADVMKSMSLVQYTPAEKDEQEPKFEEIARHYQTLWSTAVTLIEEHVYLLADAEGNLVV 922

Query: 622  VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 681
            +++N+ G T+ +R RL+   E  LGE VNR  H   V    ++ V      +  TV+G I
Sbjct: 923  LQQNTTGVTESDRKRLQPTSEIRLGEMVNRI-HPITVQTHTETAVSA--RALLATVDGSI 979

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIES 740
             +   +       L +LQT +  +    G +   ++R+F    +  D    F+DG+LIE 
Sbjct: 980  YLFGLINPAYIDLLLRLQTAMASITVSPGEIPFSKYRAFRTTVRQSDEPFRFVDGELIER 1039

Query: 741  FLDLSRTRMDEISKTM---NVSVEELCKRVEELTRLH 774
            FL  + T  +EI+  +   NV+V  L + +EEL R+H
Sbjct: 1040 FLSCTPTMQEEIANRLDDSNVTVSSLKEMIEELRRMH 1076


>gi|392591958|gb|EIW81285.1| hypothetical protein CONPUDRAFT_56293 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1245

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 251/830 (30%), Positives = 406/830 (48%), Gaps = 86/830 (10%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + +GS++  ++R+ N+ PI D  +VD +  GQ +VVTCSG    GS+R+VR+G    E A
Sbjct: 428  NGRGSHLTEVDRFQNIAPIYDAALVDPDNSGQYEVVTCSGGQNTGSIRLVRSGADFQEAA 487

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS-QTQT 136
            ++  +  I  +W +RS   DP  T +V S   ET +  ++ +  +      GF + + +T
Sbjct: 488  AIGGIPNITNIWPVRSLYSDPIHTHIVASTPQETYVFRIDNKHTVSHVADSGFVTGKKRT 547

Query: 137  LFCHDA--------------IYNQLV-QVTS------------GSVRLVSSTSRELRNEW 169
            L   +               + + LV QVTS            G    V     ++    
Sbjct: 548  LVVQNLQKKVPKEAGQGLTYMDSSLVLQVTSDELVLLNLDKGLGEFTRVGDGVCKMGQLA 607

Query: 170  KSPPGY---SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE------YEISC 220
               PG+    +  A+ANASQV+L    G L  +   D     V +           EIS 
Sbjct: 608  GGKPGWIDREIVAASANASQVVLGLSFGRLAVVNFADNKFKLVGYRDFTNPSGGIAEISA 667

Query: 221  LDINPIGENPSYSQIAAVGMWTDISVRIFSL--PDLNLITKEHLGGEIIPRSVLLCAFEG 278
            +   P  ++ S+S +AAV  W    V I SL  P   L     L    +PRS+L+  F G
Sbjct: 668  VSCTPADQSKSFSPMAAVAFWQTHRVEIISLGSPFPTLCASVSLPS--LPRSLLMHRFAG 725

Query: 279  IS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
             S     +LL    DG +  F+L  K   L ++K++ +G  P+T  T  +K  T VFA  
Sbjct: 726  ESANAPPHLLVGRADGVVATFVLKDKA--LVEQKQIPVGNLPVTFHTCKAKGRTAVFACG 783

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R +V++    +L +S + LKEV+     ++  +  SL +A    L IG + +++KLHIR
Sbjct: 784  SRTSVLFWEKDRLRHSPLILKEVAAAASLHTHDYRSSLVLATSEGLVIGDVQNLEKLHIR 843

Query: 394  SIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLLDDQTFEFISTYPLD 449
            SI  G ++PRRI H    +  A+  +++        E     V+L +D T + +    LD
Sbjct: 844  SIHTGLDNPRRISHSPVHKALAVGCVRHTPVRVGEPEISRGSVQLYNDTTLDKLGQVVLD 903

Query: 450  TFEYGCSI--LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK----LQLIA 503
              E   +I  LS   ++++   + VGT  +   ENE + GR+L+   +  +    + + A
Sbjct: 904  HDEEPMAIKALSVRVAEEAKDCFVVGTVIIDSLENESSSGRLLLVEPDYSRGESFVAVSA 963

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL---QSECGHHGHILALYVQ 560
             ++ KG VY++ A +G ++AA+N  + +Y  +  DD TR L   +    +H +++A  V 
Sbjct: 964  SEKVKGCVYAVAAVDGLVVAAVNSAVVIYS-IEADDHTRALSFVKKVEWNHNYVVANLV- 1021

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
            +RG+ ++VGD + S++LL Y  E GA++  ARDY+  W ++VE+LD+   +GA+N+ NLF
Sbjct: 1022 SRGNLLLVGDAISSVTLLQY--ERGALQNVARDYSPLWPTSVEMLDERNVIGADNDCNLF 1079

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD---SDVGQIPTVIFGTV 677
                  +GA   ER  LE  G Y+ G+ VN+F  G +   L     SD+   P  +F T 
Sbjct: 1080 MFTLQ-DGA---ERKVLERNGHYYFGDMVNKFIPGEIYRALSSFEASDIEVEPKQLFFTT 1135

Query: 678  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKTVDAKN----F 732
             G IGV+  +  E  L +  LQ NL        GG +H ++R+  N +   DA N    F
Sbjct: 1136 TGSIGVVIDMSDELSLHMSSLQRNLSTYFAAQPGGASHTKYRAPKNARGRSDADNSSFGF 1195

Query: 733  LDGDLIESFL----DLSRTRM----DEISKTMNVSVEELCKRVEELTRLH 774
            LDGDL+E FL    D    R        ++ ++++ E + K +E L  +H
Sbjct: 1196 LDGDLLERFLLFGDDEEAVRKVLEGSTEAEQLSIAPERIIKVLERLQSMH 1245


>gi|336369683|gb|EGN98024.1| hypothetical protein SERLA73DRAFT_109335 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336382464|gb|EGO23614.1| hypothetical protein SERLADRAFT_449959 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1257

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 242/835 (28%), Positives = 394/835 (47%), Gaps = 92/835 (11%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + +GS++ V+E Y N+ PI+D  +VD++  GQ  VVTCSG    GS+ IVRNG      A
Sbjct: 436  NGRGSFLSVIESYKNIAPIIDAALVDVDNSGQHAVVTCSGGQNTGSISIVRNGADFKAMA 495

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM---NLEDELEETEIEGFCSQT 134
            ++E +  +  +W LR++  D  DT + VS    T IL+    N+   +     +GF + +
Sbjct: 496  NMEGIVDVTNIWPLRANYYDTVDTHVAVSTFKATHILSFDGRNVASHVNPVS-KGFITTS 554

Query: 135  QTLFCHDAI---------------YNQLVQVTSGSVRLVSSTSR-----ELRNEWKSP-- 172
             TL   + +                + +VQ+TS  + L+           + + W     
Sbjct: 555  PTLVIANVLGRPKAPGQATNSYVDSSLVVQITSRGIALLEYAVELGEYARVGDIWTPAKL 614

Query: 173  -----PGYS---VNVATANASQVLLATGGGHLVYLEIGDGILTEVKH-------AQLEYE 217
                 PG+    +  A+AN SQ +LA   G +V L + D    +  +       +    E
Sbjct: 615  SSTNGPGWENREIVAASANGSQFVLALNSGRIVLLNLDDRNCFDCLNWRDLDGSSNYPTE 674

Query: 218  ISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL---PDLNLITKEHLGGEI-------- 266
            IS +   P+  +  +S    V  W+   + I S         I K  +   +        
Sbjct: 675  ISAISCVPLNPSKKFSMYIVVSFWSSNHIEILSANAASHFASICKTPVLPSLPRSLLLFN 734

Query: 267  IPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 326
              RS +    E   YL+  LGDG ++++    K  EL  +K  S+G  P+TL     +  
Sbjct: 735  FTRSDIPKQTEYNQYLIVGLGDGSVVSY--EFKKEELHGQKIFSVGNVPVTLHPCDVEGR 792

Query: 327  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 386
              VFA   R ++++   ++L +S + L EVS +   N+  F  S+ +A    L IG++ +
Sbjct: 793  RTVFACGSRTSILFWDKERLHHSPLMLNEVSAVSRLNTTVFDSSVILATSTGLVIGSVKN 852

Query: 387  IQKLHIRSIPLG-EHPRRICHQEQSRTFAI-CSLKNQSCAEESEM--HFVRLLDDQTFEF 442
            + KL+IRSIPLG ++PRRI H    R +A+ C     +  +++E     ++L D  TF  
Sbjct: 853  LDKLYIRSIPLGYDNPRRILHVPSLRAYAVGCISITPTRIDKAEYTSSSMQLFDHTTFAR 912

Query: 443  ISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--- 497
            +  +  D  E      ++S +       Y C GT Y   +E EP++GR+LVF  EDG   
Sbjct: 913  LGQFRCDPNEEITALGVVSVTLERSIGTYICAGT-YKYVDEVEPSQGRLLVFDAEDGSLL 971

Query: 498  --KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ----SECGHH 551
              K+ +    E +G VY++ + NG ++AAIN  + +Y+  + D  T+ L     +E  H 
Sbjct: 972  REKITMAVSLEVRGCVYAVGSVNGMIIAAINSSVVVYRPEI-DASTQLLALHKITEWNH- 1029

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
             + L   +  RGD I+VGD + SIS L  +  E  I+  ARDY + W   VE+LD    +
Sbjct: 1030 -NYLVTNLVCRGDKILVGDAINSISFL--RMVESQIQCLARDYGSLWPVCVEMLDQSSII 1086

Query: 612  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
            GA +++NLFT          E R  LE  G Y++G+ VN+F  G+L       D+   P 
Sbjct: 1087 GANSDYNLFTFALQET----ELRKSLERDGSYYIGDMVNKFIPGALTAHDVSVDMPLEPK 1142

Query: 672  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK- 730
             +F T  G IGVI  +  E  L +  LQ N+   +    G+ H ++R+  N     DA+ 
Sbjct: 1143 QLFFTSTGCIGVIVDMGDELSLHMTALQRNMSTYLSQTKGVTHTKFRAPKNAYGRSDAEA 1202

Query: 731  ---NFLDGDLIESFLDL------SRTRMDEI--SKTMNVSVEELCKRVEELTRLH 774
                FLDGD +E F+         ++ MD    ++ + +SV+ + + +E L  +H
Sbjct: 1203 TSFGFLDGDFLEKFMQFLNDPGPLKSIMDGQGEAERLTISVDRIHRVLERLQSMH 1257


>gi|226291941|gb|EEH47369.1| DNA damage-binding protein 1a [Paracoccidioides brasiliensis Pb18]
          Length = 1209

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 228/809 (28%), Positives = 396/809 (48%), Gaps = 56/809 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
            QLI++      +GS+ E+++ + N+ PI+DF ++DL     E Q      GQ ++VT SG
Sbjct: 413  QLIRIT-----EGSF-EIIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTGSG 466

Query: 59   AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            A+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+    
Sbjct: 467  AFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVFHFT 526

Query: 118  LEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             + E+EE  E  G      TL   +    +++QVT  +VR+       L   W  P   +
Sbjct: 527  QDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPSQKA 586

Query: 177  VNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            +  A++N   ++L  GG  L+  +I G+  L   K    + ++S + +     +P+   I
Sbjct: 587  ITAASSNDDHLVLVVGGQVLMCFDIQGEVKLAGKKDFGDDTQVSGVTVT---SSPATYCI 643

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHL 291
              +    ++ V   +L D+ +     +G  GE  PRSVL+        + L  ++ DG +
Sbjct: 644  LCLPQTAEVVV--MNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSMADGRV 701

Query: 292  LNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
             +F  N     L    K+ LG+ QP   +        ++FA  ++P++IY++  +++YS 
Sbjct: 702  FSFSFNADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGRIIYSA 761

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
            V+  + S +C FNS A+P S+A+A   EL I  +D  +   I ++ + E  RR+ +    
Sbjct: 762  VHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIDETVRRVAYSAAE 821

Query: 411  RTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----S 463
            + F I ++K   ++ AE     F+ L D+  F  +  Y L   E   S++   F     S
Sbjct: 822  KAFGIGTIKRTLENGAEVITSRFM-LADEIMFRELDDYSLRPDELVESVIQAQFPEGKDS 880

Query: 464  DDSNVY---YCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            D +  +   + VGT+Y+        +GRIL F V   + L  +AE   KGA  +L     
Sbjct: 881  DGNESFKDIFVVGTSYLDDVGEGSIRGRILAFEVTGSRQLAKVAELPVKGACRALAVVQD 940

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            K++AA+ + + +Y     +     L     +      + +   G+ I V DLMKS+S++ 
Sbjct: 941  KIVAALMKTVVIYSIAKGELSDYTLNKTASYRTSTAPIDIAVTGNLIAVADLMKSVSIIE 1000

Query: 580  YKHEEG----AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            +K  E     ++ E AR +   W +AV  + ++++L ++   NL  + +N  G TD+++ 
Sbjct: 1001 FKQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLESDAEGNLVVLNRNVNGVTDDDKR 1060

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---PTVIFGTVNGVIGVIASLPHEQY 692
            RLEV  E  LGE VNR R  S+   LP +   +    P    GTV G I +   +     
Sbjct: 1061 RLEVTSEILLGEMVNRIRPVSIQGSLPATGPREAVISPKAFLGTVEGSIYLFGLINPAYQ 1120

Query: 693  LFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDE 751
              L +LQ+ +  ++   G +   ++R+F N  ++  +   F+DG+LIE F        +E
Sbjct: 1121 DLLMRLQSAMAGLVVTPGAMPFNKFRAFKNAVRQAEEPYRFVDGELIERFWACETALQEE 1180

Query: 752  I------SKTMNVSVEELCKRVEELTRLH 774
            I          +V+VE++ + VEEL R+H
Sbjct: 1181 IVGLVVAGGVADVTVEKVKRIVEELRRMH 1209


>gi|327301962|ref|XP_003235673.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
 gi|326461015|gb|EGD86468.1| UV-damaged DNA binding protein [Trichophyton rubrum CBS 118892]
          Length = 1147

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 228/793 (28%), Positives = 395/793 (49%), Gaps = 60/793 (7%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAYKDGSLRIVRNGIGINE 76
            ++++   N+ PI+DF ++D+  +         GQ ++VT SGA+ DGSLR VR+G+GI E
Sbjct: 371  DLVQTISNIAPILDFTIMDMGDRSGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEE 430

Query: 77   QASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFCSQ 133
               +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   + + ++EE E    G    
Sbjct: 431  LGVLASMEHITDLWALRSACPEPFFDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFS 490

Query: 134  TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGYSVNVATANASQVLLATG 192
              TL   +   N+++QVT    R +   S  +   W+S    +++  A+AN   ++L  G
Sbjct: 491  ESTLLATNIPGNRILQVTESISRAIDVDSGMII--WRSSYEEFTITSASANDDYLVLVLG 548

Query: 193  GGHLVYLEIGDGILTEVKHAQLEYEISCLDI--NPIGENPSYSQIAAVGMWTDISVRIFS 250
            G  LV + +    L   +  + + ++S + I  +PI       Q   V +     + I  
Sbjct: 549  GTRLVCISLSTFELVGSRDFEADNQVSGMTIPASPI-------QACIVCLPQSAEIIILD 601

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            LP L +  K+ LG  GE IPRSV++          L  ++ DG + +F  ++    + + 
Sbjct: 602  LPGLEVKNKQTLGEPGEAIPRSVIVAEILPNKPPTLFVSMADGTVFSFSFDVHAFAIFNS 661

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K++LG++  + +     N  + VFA  D P++I++S  +++YS V+    S +C  N+ 
Sbjct: 662  SKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNTQ 721

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
            A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +    + F + ++K +  + 
Sbjct: 722  AYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYSPTEKAFGLGTVKRKISNG 781

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFE-----------YGCSILSCSFSDDSNVYYCV 472
             EE    FV L D+  F  +STY L   E           +G   +  S S D    + V
Sbjct: 782  VEEVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNHGKDEVGNSISKD---LFFV 837

Query: 473  GTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQ 530
            GTA++    ++  +GRILVF V   + L LI EK   GA  +L   +  LL A + + + 
Sbjct: 838  GTAFLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRTLAVMDHTLLVAGLVKSVS 897

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-KHEEG---- 585
            ++K      G   L+    +      + +   GD + V D+MKS+SL+ Y + EEG    
Sbjct: 898  VFKLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQYTQAEEGEREP 957

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
              EE AR Y   W +AV  +++++YL A+   NL  +++N  G T+ +R RL+   E  L
Sbjct: 958  KFEEIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDRKRLQPTSEIRL 1017

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            GE VNR  H  ++    ++ V      +  TV+G I +   +       L +LQT +  +
Sbjct: 1018 GEMVNRI-HPIVIQTYTETAVSA--RALLATVDGSIYLFGLINPTYIDLLLRLQTAMGSI 1074

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMN---VSVE 761
                G +   ++R+F       D    F+DG+LIE FL  +    +EI   ++   V+V 
Sbjct: 1075 TISPGEIPFSKYRAFRTTVHQSDEPFRFVDGELIERFLSCTPGMQEEIVSRLDDSTVTVS 1134

Query: 762  ELCKRVEELTRLH 774
             L + +EEL R+H
Sbjct: 1135 SLKEMIEELRRMH 1147


>gi|408393339|gb|EKJ72604.1| hypothetical protein FPSE_07241 [Fusarium pseudograminearum CS3096]
          Length = 1161

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 207/806 (25%), Positives = 401/806 (49%), Gaps = 50/806 (6%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL ++N+   A    V +++ + N  PI+DF ++D+  +            GQ ++V   
Sbjct: 365  QLYQINIDTKA----VMLVQSFSNNAPILDFSIMDMGNREGDTQSGNVFSSGQSRIVAGC 420

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GAY+DG+LR +R+G+G+ ++  + EL+G +G+++L S      DT LVVS I+ETRIL+ 
Sbjct: 421  GAYRDGTLRSIRSGVGLEDRGVLDELEGTRGLFTLHSYGSKMVDT-LVVSSITETRILSF 479

Query: 117  NLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
            +LE  +EE    +G    ++TL   +    QL+Q+T  SV L+        ++W  P G 
Sbjct: 480  DLEGGIEEIYSFQGMSLDSETLLASNLPSGQLLQITPKSVVLLDPEGGTTISKWDVPDGK 539

Query: 176  SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
            ++  A+AN+   LL+  G  LV L +   +    +    +       I+ I        +
Sbjct: 540  TITRASANSKWALLSVDGTSLVSLNLLQNLAVNAQQINNDSTSQPDQISCIHAARDPPDL 599

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALG 287
               G W+   + +  +  L  +  E +        +PR V L      +     LL A+ 
Sbjct: 600  GVAGWWSSGQISLIDMASLKPLHGESMRQTEDSATVPRDVALVQLHPPNISGPTLLVAME 659

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKL 346
            DG+++ F ++ K   ++ RK V+LG+ P  L     ++ T++VF  ++  ++IYSS  ++
Sbjct: 660  DGNVVTFNVSTKGFSVSGRKSVTLGSNPARLHILPQEDGTSNVFVTTEHASLIYSSEGRI 719

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            ++S     + + + PF+S AFPDS+ ++ +  + I  +D  +  H++++P+ E  RR+ +
Sbjct: 720  IFSATTADDATFVAPFSSHAFPDSVVLSTDQHIRICHVDRERLTHVKALPVNETVRRVAY 779

Query: 407  QEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTF-EFISTYPLD---TFEYGCSILSCS 461
                + F + S+K +    EE      RL+D+  F E  S + L+   + E    ++   
Sbjct: 780  SPGLKAFGLGSIKRELVNNEEVVTSSFRLVDEIVFKELGSPFALNGSSSLELVECVIRAE 839

Query: 462  FSD---DSNVYYCVGTAYVLP---EENEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSL 514
              D   +    + VGT+++     E+   T GRILV  V+ + ++  I     KG    L
Sbjct: 840  LPDVGGNPTERFIVGTSFISDGGVEDPNGTLGRILVLGVDANRQVYQIVSHNLKGPCRCL 899

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
                  ++A +++ + +Y +      +  LQ    +    + + +   G+ I VGDLM+S
Sbjct: 900  GMIEDNIVAGLSKTVVVYSFSQETSSSGSLQKLAAYRPAAIPIDIDVSGNMIGVGDLMQS 959

Query: 575  ISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            +SL+ +       +  ++ERAR + + W +AV  ++ + +L A++  NL  +++N +  T
Sbjct: 960  LSLVEFIPAQDGNKAQLQERARHFESLWTTAVCHIEGERWLEADSRGNLVVLQRNVDAPT 1019

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPH 689
            +++R RLE+  E  +GE +NR R     + +P ++   + P     +  G + +   +  
Sbjct: 1020 EQDRRRLEITSEMGIGEQINRIRK----LNVPAAENNIVHPRAFLASAEGSLYLYGDVAP 1075

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTR 748
            +    L   Q+ + + +  +G +  + WRSF N+ +  +    F+DG++IE FLD+   +
Sbjct: 1076 QYQDLLMTFQSRMEECVLALGNVEFKLWRSFRNDNRESEGPYRFIDGEMIERFLDMDEEQ 1135

Query: 749  MDEISKTMNVSVEELCKRVEELTRLH 774
             + +   +  +VE++   +EEL R+H
Sbjct: 1136 QELVCDGLGPTVEDMRNLIEELRRMH 1161


>gi|326474493|gb|EGD98502.1| UV-damaged DNA binding protein [Trichophyton tonsurans CBS 112818]
 gi|326481558|gb|EGE05568.1| UV-damaged DNA binding protein [Trichophyton equinum CBS 127.97]
          Length = 1147

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 228/790 (28%), Positives = 396/790 (50%), Gaps = 54/790 (6%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAYKDGSLRIVRNGIGINE 76
            ++++   N+ PI+DF ++D+  +         GQ ++VT SGA+ DGSLR VR+G+GI E
Sbjct: 371  DLIQTISNIAPILDFTIMDMGDRLGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEE 430

Query: 77   QASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFCSQ 133
               +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   + + ++EE E    G    
Sbjct: 431  LGVLASMEHITDLWALRSACPEPFSDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFS 490

Query: 134  TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGYSVNVATANASQVLLATG 192
              TL   +   N+++QVT  S R++      +   W+S    +++  A+AN   ++L  G
Sbjct: 491  QSTLLATNIPGNRILQVTESSSRVIDIDGGMII--WRSTYEEFTITSASANDDYLVLVLG 548

Query: 193  GGHLVYLEIGDGILTEVKHAQLEYEISCLDI--NPIGENPSYSQIAAVGMWTDISVRIFS 250
            G  LV + +    L   +  + + ++S + I  +PI       Q   V +     + I  
Sbjct: 549  GIRLVCISLSTFELIGSREFEADNQVSGMTIPASPI-------QACIVCLPQSAEIVILG 601

Query: 251  LPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDR 306
            LP L +  K+ LG  GE IPRSV++          L  ++ DG + +F  ++    + + 
Sbjct: 602  LPGLEVKNKQTLGEPGEAIPRSVIVAEILPNNPPTLFVSMADGTVFSFSFDVHAFAIFNS 661

Query: 307  KKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             K++LG++  + +     N  + VFA  D P++I++S  +++YS V+    S +C  N+ 
Sbjct: 662  SKITLGSEQPSFKKLPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNTQ 721

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
            A+P S+A++ + EL I  +D+ +   I ++P+    RR+ +    + F + ++K +  + 
Sbjct: 722  AYPGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYSPVEKAFGLGTVKRKISNG 781

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILS-CSFSDD------SNVYYCVGTA 475
             EE    FV L D+  F  +STY L   E   C I S  ++  D      S   + VGTA
Sbjct: 782  VEEVSSSFV-LADEILFRPLSTYDLRPDELVECVIRSQLNYGKDEVGNLISKDLFFVGTA 840

Query: 476  YVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLYK 533
            ++    ++  +GRILVF V   + L LI EK   GA  +L   +  LL A + + + ++K
Sbjct: 841  FLDDVGDDHIRGRILVFEVNRSRELSLIVEKSLMGACRTLAVMDQTLLVAGLVKSVSVFK 900

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY-KHEEGA----IE 588
                  G   L+    +      + +    + + V D+MKS+SL+ Y + EEG      E
Sbjct: 901  LARGRFGNILLEKHAAYRTSTAPIDISVVDNTVAVADVMKSMSLVQYTQAEEGGQEPKFE 960

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
            E AR Y   W +AV  +++++YL A+   NL  +++N  G T+ +R RL+   E  LGE 
Sbjct: 961  EIARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDRRRLQPTSEIRLGEM 1020

Query: 649  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 708
            VNR  H  +V    ++ V      +  TV+G I +   +       L +LQT +  +   
Sbjct: 1021 VNRI-HPIVVQTHTETAVSA--RALLATVDGSIYLFGLINPNYVDLLLRLQTAMGSIATS 1077

Query: 709  VGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMN---VSVEELC 764
             G +   ++R+F    +  D    F+DG+LIE FL  +     EI   ++   V+V  L 
Sbjct: 1078 PGEIPFSKYRAFRTTVRQSDEPFRFVDGELIERFLSCTLAMQQEIVGRLDDSTVTVSSLK 1137

Query: 765  KRVEELTRLH 774
            + +EEL R+H
Sbjct: 1138 EMIEELRRMH 1147


>gi|402223178|gb|EJU03243.1| hypothetical protein DACRYDRAFT_115454 [Dacryopinax sp. DJM-731 SS1]
          Length = 1175

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 249/830 (30%), Positives = 405/830 (48%), Gaps = 77/830 (9%)

Query: 4    FYVLPK----QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGA 59
            F+V  K    QLI L          + VL+ ++NL PI DF V D E+ GQ Q+VT SG 
Sbjct: 364  FFVTSKCGDSQLISLTPSAICGTGNIAVLDTHLNLAPISDFVVTDPEKIGQQQIVTASGR 423

Query: 60   YKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 118
               GSLR+VR+G+   E   +E +   + ++ L+ + D  +  +LV S +  T + +M  
Sbjct: 424  MNTGSLRVVRSGVAFEELGLLEQVMNTRSIFPLKINFDAEYHLYLVTSSLHRTTLYSMRG 483

Query: 119  ED------ELEETEIEGFCSQTQTLFCHDAIYNQL-VQVTSGSVRLVSSTSRELRNEWKS 171
            +D      E++E+E  G   Q  TL   +   + + VQVT+GSV  +   + E R+ WK 
Sbjct: 484  DDSSPQFEEVDESEARGIVRQVPTLAAGNIREDDIFVQVTAGSVVAIDLITWEQRSIWK- 542

Query: 172  PPGYSVNVATANASQVLLATGGGHLVYL--EIGDGILTEVKHAQLEY---EISCLDINPI 226
             P   +  A  N  +V+    GG+LV+L  +    I+     +   +   EISC+ ++P 
Sbjct: 543  -PHVEIVCAAVNGQRVVAGLKGGYLVHLIPQRDQFIVANDWKSPGSWGLTEISCIALDPT 601

Query: 227  GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII------PRSVLLCAFEGIS 280
              +      AA+G W    V+IF L D     +E    E I      P S +L  F G S
Sbjct: 602  -LSAELGNYAAIGFWGTNQVKIFYLGDETHRFEELKLAEPISPEDHLPVSTILTTF-GTS 659

Query: 281  ---YLLCALGDGHLLNFLLNMKT--GE----LTDRKKVSLGTQPITLRTFSS-KNTTHVF 330
               +LL  LG+G + ++ L  +   GE     TD+K  SLGT+PI L   +     +++F
Sbjct: 660  NRPHLLVGLGNGTISSYALKTEIVLGEPSVRATDKKIFSLGTKPIMLNACTDLGRESNIF 719

Query: 331  AASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL 390
            A  DRP +++  N +L  S + L+++      +   FP S   A    L IG I + QK+
Sbjct: 720  ACGDRPALLFLKNDRLTASPIKLRDIHAGSVLHIPQFPSSFIFASASTLLIGQIRESQKI 779

Query: 391  HIRSIPLG-EHPRRICHQEQSRTFA-ICSLKNQSCAEESEMH--FVRLLDDQTFEFISTY 446
             +R+I LG + P R+ +    R +  +C  K  +  ++ E++    +L DD TFE+++ +
Sbjct: 780  DVRTISLGLDTPIRLTYHRGLRAYGVVCQRKELNREDDREIYSSSFKLFDDITFEYLNNF 839

Query: 447  ---PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF-IVEDGKLQLI 502
               P +      +I   +  +DS+ +  VGT      E + +KGRIL+F  V + KL+L+
Sbjct: 840  TARPDEQMMCVTTIPDSTGEEDSD-FLVVGTYEATGAEEDVSKGRILIFEEVPNRKLKLV 898

Query: 503  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 562
               +  G VY++      L AAIN  +Q++      D  R ++S        +A  +  R
Sbjct: 899  VSHDVGGCVYAVTNVGANLAAAINGTLQVFSLHRSHDDIR-IESVAKWSSAYVASSLICR 957

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            G+ ++VGD M+++ +L +   +  +E    DY + W+  +E +D+   +GAE N N+ T 
Sbjct: 958  GNTLLVGDAMRAVCILRWTGAK--LETLYHDYASLWIQTLESIDEGGVIGAELNNNIVTW 1015

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP--DSDVGQIPTVIFGTVNGV 680
            RK+         G+LE  G ++ GE +NRFR  SL    P    +      ++F T  G 
Sbjct: 1016 RKD---------GKLERDGMWYFGEGINRFRRASLNAAAPGAGGNNAGRGNLVFCTNTGR 1066

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK-------KTVDAKNFL 733
            IG++ASL  +  + L  LQ N+  VI+G G + H + R+  +         +   A  F+
Sbjct: 1067 IGIVASLDEDLSMQLSNLQRNIGSVIQGPGKVEHSRRRAPQSTPGLPTILTQNTHAVGFI 1126

Query: 734  DGDLIESFLDLSRTRMDEISKTM--NVSVEELCKR-------VEELTRLH 774
            DGD +E FL L  +  DE+ + +      E+L  R       +EEL RLH
Sbjct: 1127 DGDFVEKFLYLDPSS-DEVMRILEGKNKYEQLGNRYHDIVQMLEELQRLH 1175


>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1409

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 232/816 (28%), Positives = 394/816 (48%), Gaps = 89/816 (10%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSG 58
            QL+K+++   A     ++++   N+ PI+DF ++DL              GQ ++V   G
Sbjct: 356  QLLKVDVT--AGSETTQIVQTIPNIAPILDFAIMDLGNAGDSQVGNAFSSGQARIVAGCG 413

Query: 59   AYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
             +++GSLR +R+ +G+ +   +E L  ++G++SLRS+  D  DT LVVSFI++TR+   +
Sbjct: 414  VHQNGSLRSIRSSVGLEDIGVLEDLSDVRGLFSLRSNGSDKDDT-LVVSFITDTRVFRFD 472

Query: 118  LEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
             E+ +EE  + +G      TL        QL+QVT+ S  L+        + W +P G  
Sbjct: 473  AEEGIEEVFQFQGLGLDKPTLIASTLPNGQLLQVTANSAALLDPEGGITLSTWSAPEGKV 532

Query: 177  VNVATANASQVLLATGGGHLVYLEI-----------GDGILTEVKHAQLEYEISCLDINP 225
            +  A++NA  VLL+  G  LV L +           G G+  E        +ISC+    
Sbjct: 533  IVNASSNAKWVLLSIDGTTLVSLSLLENLAAREQVLGSGVGGEGD------QISCIHAAT 586

Query: 226  IGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY 281
              +N     +  VG W   S+ I  L  L+ +  E +        +PR++ L        
Sbjct: 587  DLDN-----VGVVGFWATGSISIIDLQTLDAMHGETIKQTDDSVSVPRNIAL-------- 633

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT---THVFAASDRPTV 338
                     +++F ++     L+ RK V LG++   L      +T   ++VFA ++  ++
Sbjct: 634  ---------VVSFDVSKDNYSLSGRKSVILGSKQSGLHILPRPDTDGISNVFATTEHSSL 684

Query: 339  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG 398
            IYSS  +++YS    ++V+++ PF+S AFPD++ +A +  + I  ID  ++ H+  +PL 
Sbjct: 685  IYSSEGRIIYSAATAEDVTYIAPFDSEAFPDAIVLATDKNVRIAHIDVERRTHVNPLPLR 744

Query: 399  EHPRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFI-STYPLD---TFEY 453
            +  RR+ +    + F I +++ +    EE      +L+D+     +   + LD   T E 
Sbjct: 745  QTVRRVAYSPALKAFGIGTIRRELFNNEEMVTSSFQLVDEIVLGVVGKPFHLDGAATTEL 804

Query: 454  GCSILSCSFSDDSNV---YYCVGTAYVL-PE--ENEPTKGRILVFIVE-DGKLQLIAEKE 506
              S++     D S      + VGT+Y+  PE  EN   KGRILV  V+ D     I   E
Sbjct: 805  VESVIRAELPDSSGQPAERFIVGTSYLADPEMDENSEVKGRILVLGVDSDKNPYQIVSHE 864

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
             KGA  SL     KL+A +++ + +Y +      +  L            + +   G+ I
Sbjct: 865  LKGACRSLAVMGDKLVAGLSKTVVVYDYAEESSTSGSLLKLATFRPSTFPVDLDVNGNMI 924

Query: 567  VVGDLMKSISLLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
             V DLM+S++L+ +       +  + ERAR +   W +AV  L+ D+++ A+   NL  +
Sbjct: 925  GVADLMQSMTLIEFIPAQDGNKARLVERARHFQYIWATAVCHLEQDLWIEADAQGNLMVL 984

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
            R+N    T+ ++ ++EV+ E+HLGE +N+ R   +V    D      P     T+ G I 
Sbjct: 985  RRNPNAPTEHDKKQMEVISEFHLGEQINKIRPLDVVSGENDP---IEPKAFLATIEGSIY 1041

Query: 683  VIASLPHEQYLFLEKLQTNLRKVIKGVG-------GLNHEQWRSFNNEKKTVDAK-NFLD 734
            V A +  E    L + Q  L  VIK +G       GL+   WR F N K++ D    F+D
Sbjct: 1042 VFADIKPEYQSLLLQFQERLAGVIKTLGQADEPGAGLSFMSWRGFRNAKRSADGPFRFVD 1101

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            G+LIE FLDL   R + + + +  +VE +   VEEL
Sbjct: 1102 GELIERFLDLDAGRQEAVVQGLGPTVERMRDLVEEL 1137


>gi|425777692|gb|EKV15851.1| UV-damaged DNA binding protein, putative [Penicillium digitatum Pd1]
 gi|425779888|gb|EKV17916.1| UV-damaged DNA binding protein, putative [Penicillium digitatum
            PHI26]
          Length = 1140

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 230/791 (29%), Positives = 387/791 (48%), Gaps = 52/791 (6%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSGAYKDGSLRIVRN 70
            G+  EV++   N+ PI+DF ++DL     E Q      GQ ++VT SGA+ DG+LR +R+
Sbjct: 364  GTSFEVIQTLSNIAPILDFTIMDLGNRTNESQTHEFSSGQARIVTGSGAFDDGTLRSLRS 423

Query: 71   GIGINEQASV-ELQGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNLEDELEETE-I 127
            G+G+ +   + E++ I  +W L++ ST D  DT L+V+F+ ETR+   + + E+EE +  
Sbjct: 424  GVGMEDLGVLGEMEHISDLWGLQTRSTGDYLDT-LIVTFVDETRVFQFSPDGEVEELDNF 482

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
             G      TL        +++QVT     +    S  +  EW       +   + N   +
Sbjct: 483  LGLSLTESTLLATRLQGGRILQVTEQRALVADLESGMVIFEWVPQDQKLITAVSTNEDHL 542

Query: 188  LLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            +L   G  +   +I D + + ++K    + +IS L +      P+   IA  G      V
Sbjct: 543  VLVISGQIVASFDIRDNVQIIKLKDLGADQQISGLTVP---STPTGVFIA--GFPQSAKV 597

Query: 247  RIFSLPDLNLITKEHLG--GEIIPRSVLLCAFEGISY--LLCALGDGHLLNFLLNMKTGE 302
             I  + D  ++  + LG  GE  PRSVL+      S   L  ++ DG ++ F L+ +   
Sbjct: 598  SILDIKDFAVLQTKSLGPPGESFPRSVLVAEVLANSQPTLFISMADGCVITFSLDSRDCS 657

Query: 303  LTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 361
            L++  K+ LG+ QPI  +        +VFA  + P++IY S  +++YS VN    S +C 
Sbjct: 658  LSEMNKLILGSEQPIFKKLPKGDGLYNVFATCENPSLIYGSEGRIIYSAVNSDGASRVCH 717

Query: 362  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL--K 419
             N+ A+PDS+A+A E EL I  +D  +   I+++P+G   RR+ +    + F I ++  K
Sbjct: 718  LNAEAYPDSIAVATEKELKIALVDRERTTQIQTLPMGSTVRRVAYSPSEKAFGIGTIDRK 777

Query: 420  NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNV------YYC 471
             ++ AE  + HFV L D+  F  +    L   E   S++        D N        + 
Sbjct: 778  LENGAEVVKSHFV-LADEIMFRRLDALELGPDELVESVVRAELPAGKDENGKEIVKDRFV 836

Query: 472  VGTAYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            VGTA+   ++ E  +GRIL+  V+ G KL  +AE    GA  +L      ++AA+   + 
Sbjct: 837  VGTAFADEDQEESIRGRILILEVDHGRKLSQVAELPVMGACRALAMMGDCIVAAL---VV 893

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH----EEGA 586
            +Y+  + + G  +L+    +      + V    + I V DLMKS+ L+ Y      E   
Sbjct: 894  VYRVKINNVGPMKLEKLAAYRTSTAPVDVTVVDNLIAVADLMKSLCLIRYTPGHTGEPAK 953

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
            + E  R Y   W +A+  + D+ +L ++   NL  + +N+ G T +++ RL    E  LG
Sbjct: 954  LTEVGRHYQTVWSTAIACVGDETFLQSDAEGNLIVLSRNTNGVTAQDKHRLIPTSEISLG 1013

Query: 647  EFVNRFRHGSLVMRLPD-SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            E VNR R     + +P    V   P     TV G I + A +  E   FL  LQ  L + 
Sbjct: 1014 EMVNRIRP----VHIPQLCSVMVTPRAFMATVEGSIFLFAVINPEHQDFLMTLQAALSQK 1069

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVS-VEEL 763
            +  +G L+ +++R F    ++  A   F+DG+LIE FL  + +  +EI++ +  S V E+
Sbjct: 1070 LNSLGNLSFDKFRGFRTMVRSAAAPYRFVDGELIEQFLKCTPSMQEEIAQEVGSSDVGEV 1129

Query: 764  CKRVEELTRLH 774
             + +E L RLH
Sbjct: 1130 KRLIEALRRLH 1140


>gi|378732825|gb|EHY59284.1| DNA damage-binding protein 1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1185

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 242/838 (28%), Positives = 411/838 (49%), Gaps = 99/838 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLER-------------QGQGQVVTCSGAYKDGSLRIVRNG 71
            V V++ + N+ PI+DF ++DL R              GQ ++VT SGA++DG++R VR+G
Sbjct: 359  VRVVQSFANIAPILDFTIMDLGRGAEAGGQQALEFSSGQARIVTASGAWQDGTIRSVRSG 418

Query: 72   IGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIEG 129
            +G+ E  ++ EL  I  +W L S+        LVVSF++ETR+   + E  +EE  E   
Sbjct: 419  VGLEELGTIGELSHITDLWGLSSTGQSDVQDVLVVSFVTETRVFKFDSEAAVEEVDEFHH 478

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS-VNVATANASQVL 188
                  TL   +    +L Q+    +R+    S  L  EWK P   + +  A AN+  +L
Sbjct: 479  LEFSQPTLLAANLPDRKLAQIYETGLRITDLESNMLTLEWKPPDSAAKITAACANSVHLL 538

Query: 189  LATGGG--HLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            +  GG   H+ +    +   T  K   L+ +IS + +       S S +  V  W   SV
Sbjct: 539  MVEGGHTLHVFHASNNEAKPTVSKSFPLDSQISSVTVAD-----SQSNVCIVSFWQTASV 593

Query: 247  RIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGE 302
             I  L  L+ +  + LG  G  IPRSVL+     +    L  A+ DG +L++  ++    
Sbjct: 594  AILDLHSLDTLYTQTLGTPGTDIPRSVLVAHVLPDAPPTLFIAMADGTVLSYSFDLAKHS 653

Query: 303  LTDRKKVSLGTQPITLRTFSSKNT-----THVFAASDRPTVIYSSNKKLLYSNVNLKEVS 357
            L+   ++ LGT+P+  +     N+     ++VFA+ ++P++IYSS  +++YS VN +  S
Sbjct: 654  LSGMTRILLGTEPVVFKQLPKDNSPDSNLSNVFASCEQPSLIYSSEGRIIYSAVNAESAS 713

Query: 358  HMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-C 416
             +C FN  A+P+++A+A   EL +  I   +   ++++ +GE  R + ++  ++ FA+ C
Sbjct: 714  RVCNFNCEAYPEAIAMATPTELKLALIGRERTTQLQTLSIGETVRCLTYEPTAKMFAMGC 773

Query: 417  SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILSCSFS--DDSNVY---Y 470
              +      E+ +  V++ D+ +F+ + +  L   E   C + + SF   D+S  Y   +
Sbjct: 774  IRRIMEGGTEALLSSVKIADEVSFKELDSVELQDRELVECIVSTGSFDTEDESKGYGDMF 833

Query: 471  CVGTAYVLPEEN---EPTKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
             VGT+ +L E++   E TKGRILVF V ++ KL+ + + + KGA  SL   +GK++A + 
Sbjct: 834  VVGTS-ILEEDDAGEEVTKGRILVFEVNKEKKLKAVTQIKVKGACRSLAMCDGKIVAGLV 892

Query: 527  QKIQLYKWM---LRDDGTRELQSECGHHGHI--LALYV----QTRGDFIVVGDLMKSISL 577
            + + LY  +    R + + ELQ    +      L+L V    Q     I V DLMKS+S+
Sbjct: 893  KTVVLYGLIPSSTRGEHSLELQKLATYRTSTNPLSLAVTPATQDSPALIAVADLMKSLSV 952

Query: 578  LIY-----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 632
            L        + E  + E +R +   W SA  +L  D ++ A+   NL T+R+ S  A + 
Sbjct: 953  LQVLPPDSSNSEYRLHETSRHFATLWSSATAVLRHDEWVVADMEGNLITLRQGSLDAENN 1012

Query: 633  ----ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS----------DVG----------- 667
                 R RLEV GE+ LGE VN+     +V  LP            DVG           
Sbjct: 1013 GAVAARRRLEVTGEFRLGEVVNK-----IVSILPPGSQRQSDQKMVDVGLDGGKKPARTG 1067

Query: 668  --QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
                P    GTV G I ++A++       L  LQ++L   ++  G +   ++R++  E  
Sbjct: 1068 PLVTPRTFLGTVEGAIYMLATINPAYVNVLLLLQSSLATRVQAPGYMPWAKYRAWKTEVL 1127

Query: 726  TVDAK-NFLDGDLIES-FLDLSRTRMDEI-------SKTMNVSVEELCKRVEELTRLH 774
              D     +DG+++E   + L    ++++        + +NVSVEE+    +EL RL+
Sbjct: 1128 EKDEPFRVVDGEMLEQGLVALDDRELEDVLREAGLMEEALNVSVEEVRGWADELRRLY 1185


>gi|393243160|gb|EJD50676.1| hypothetical protein AURDEDRAFT_112250 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1140

 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 228/781 (29%), Positives = 386/781 (49%), Gaps = 75/781 (9%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            QL++L+   DA GSY+ V++ Y NL PIVD  +VD+    Q QVVTCSG Y  GSLR+V+
Sbjct: 351  QLVRLSTAADASGSYISVVKAYSNLAPIVDAVIVDINDSNQPQVVTCSGGYNTGSLRVVQ 410

Query: 70   NGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
                + + A ++     + ++ LR+S+D   DT ++VS   +T+ +  NLE E    E  
Sbjct: 411  KSAELEQLAIIDAFPHTENIFPLRASSDAKEDTRMLVSSHMDTKFV--NLEGEDLSVEES 468

Query: 129  GFCSQTQTLFCHDAIYNQLV------QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
             F ++  TL   + ++   V      Q+T+  V LV++      +  + P G  + +A+ 
Sbjct: 469  PFVTREPTLAASNFVHKDQVETPYVLQITTKRVVLVNTVVDMEIHSHEYPEG--IMLASC 526

Query: 183  NASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI----SCLDINPIGENPSYSQIAAV 238
            + +Q LLA   G LVY+ + +  +   K  +LE+ +    S L I P       +    +
Sbjct: 527  SRTQALLALSDGALVYIRLENDNINATKGPKLEWTLRGQWSALCIEPADARGGPTDAVVI 586

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG----HLLNF 294
              W +       L  +  + ++ +    +  + L C     S LL   G G    H+L  
Sbjct: 587  AKWDN----TVQLRRMGALFRDDIAHATLQLASLAC-----SVLLVDFGQGRENRHVLAG 637

Query: 295  LLN--------MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 346
              N         K   L   + + LG+ P+ LR    ++   V A     TV+Y  + +L
Sbjct: 638  CANGTVVAARVTKDWNLEAPRTIGLGSLPVRLR----RDGDRVVACGSLVTVLYWDSGRL 693

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRIC 405
             +S + +K++++  P ++ AF ++      G L I  +  +Q+LHI++IP+G E+PRRI 
Sbjct: 694  QHSALAVKDITNAVPLHTPAFENTTVFISPGSLLIARVKQVQRLHIKTIPMGSENPRRIA 753

Query: 406  HQEQSRTFAICSLKNQSCA---EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
            +   ++ F + ++ +Q       ES     ++L+  TF+ +S+  LD  E   S+ S   
Sbjct: 754  YNSHAKAFGVGTMHSQPVGVGEPESVTSSFKILNQDTFDTLSSMQLDDNEEITSVASLPI 813

Query: 463  SDDSNV-YYCVGTAYVLPEENEPTKGRILVF-IVED---GKLQLIAEKETKGAVYSLNAF 517
              +S    + VGTAY+   E EP++GRILVF  +ED   G   L A  +  GAV SL + 
Sbjct: 814  MPESRTEMFVVGTAYIKDSEMEPSRGRILVFGSLEDSGTGGSWLTAFLQVTGAVLSLTSV 873

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTREL---------QSECGHHGHILALYVQTRGDFIVV 568
            +G ++A +N  + LY+  LR +   E          Q +  +H +++   +  RGD I +
Sbjct: 874  DGLIVAGVNTAVILYE--LRRNTLSEAERASHLTLRQKKEWNHNYVVT-SLAARGDTIYI 930

Query: 569  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 628
            GD + SI++L +KHE   +   AR +   +  A++++     + A  ++NL T  +  E 
Sbjct: 931  GDSVASIAILRWKHE--TLHTIARHFGPIFPLALDVMSSGSVITANIDYNLHTFHQ--ES 986

Query: 629  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 688
             TD    +LE+ G YHLG+ VN+F  G L    P      +   +F T  G IG++A   
Sbjct: 987  PTDR---KLEIDGSYHLGDQVNKFIPGRL--SAPTVGASIVLEQVFVTSLGRIGIVAEAD 1041

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK----NFLDGDLIESFLDL 744
             +    L  L+ N+ KV+   G   H+ WR+ ++E    DA+    NF+DGD++E F D+
Sbjct: 1042 KDASWALSALERNIEKVLDQ-GAPKHDLWRAPHSEHGVSDAQRSAANFIDGDMLERFYDV 1100

Query: 745  S 745
            +
Sbjct: 1101 A 1101


>gi|346970653|gb|EGY14105.1| hypothetical protein VDAG_00787 [Verticillium dahliae VdLs.17]
          Length = 1160

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 221/811 (27%), Positives = 389/811 (47%), Gaps = 77/811 (9%)

Query: 25   VEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSGAYKDGSLRIVRNGIG 73
            + +++   N+ PI+DF ++DL              GQ ++V   G + +GSLR +R+ +G
Sbjct: 366  IRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVHHNGSLRSIRSSVG 425

Query: 74   INEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFC 131
            + +   ++ +Q ++G++SL+S   +  DT LVVSF++ETR+   + +  +EE T  +G  
Sbjct: 426  LEDIGILDDIQDVRGLFSLKSYGSEKVDT-LVVSFLTETRVFKFDADGGVEELTAFQGLT 484

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TLF         +Q+T+ S  L  S S    N W SP G S+  A+ N    LL+ 
Sbjct: 485  LDQPTLFAGSLANGHTLQITASSALLQDSESGVTINSWTSPNGGSIVNASVNEKYALLSV 544

Query: 192  GGGHLVYLEIGDGILTEVKHAQLE-------YEISCLDINPIGENPSYSQIAAVGMWTDI 244
            GG  LV L +      +V+   L         +ISC     I  +  +  I A+G W+  
Sbjct: 545  GGSTLVSLNLTQNF--DVREQALGNGIGGDGSQISC-----IHASRDFPDIGAIGFWSTG 597

Query: 245  SVRIFSLPDLNLITKEHLGGEII---------PRSVLLCAFE----GISYLLCALGDGHL 291
            SV +     +NL T + L GE I         PR +              L  +L DG +
Sbjct: 598  SVSV-----INLGTLQALHGESIKQNDDNVSVPRDLAFVQLHPPQLAGPTLFVSLEDGQV 652

Query: 292  LNFLLNMKTGELTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDRPTVIYSSNKKLLY 348
            ++  ++     LT RK V+LG++   L       +   ++VFA ++  ++IYSS  +++Y
Sbjct: 653  VSINVSKDDYSLTARKSVTLGSREAGLHVLPRPGAPGQSNVFATTEHSSLIYSSEGRIIY 712

Query: 349  SNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQE 408
            S    ++V+++ PF+S  FPD++ +A +  + I  +D  ++ H+  + +GE  RR+ +  
Sbjct: 713  SAATAEDVTYIAPFDSEGFPDAIFLATDKNVRIANVDTERRTHVNPLHIGETVRRVAYSP 772

Query: 409  QSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPL-----DTFEYGCSILSCSFS 463
              + F I +++ +   +E  +     L D+        P       + E   +++     
Sbjct: 773  ALKAFGIGTIRKELLHDEEVVSSAFQLVDEIVLGKVGRPFALGGEASVELVEAVIRAELD 832

Query: 464  DDSNV---YYCVGTAYVL-PEENEP--TKGRILVFIVE-DGKLQLIAEKETKGAVYSLNA 516
            D +      + +GT+Y+  P+ NE    KGRILV  V+ D    LI   E KGA   L  
Sbjct: 833  DSTGQPAERFIIGTSYLADPDVNESGDVKGRILVLGVDSDRNPYLIVSHELKGACRCLGV 892

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
               KL+A +++ + +Y ++     + +L+           + +   G+ I V DLM+S++
Sbjct: 893  MGDKLVAGLSKTVVVYDYIEDSTTSGKLEKLTTFRPSTFPVDLDISGNMIGVADLMQSMT 952

Query: 577  LLIY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE 632
            L+ +       +  + ERAR +   W +AV  L ++ +L A+   NL  + +  +  T+ 
Sbjct: 953  LVEFLPAKDGRKAKLIERARHFEYIWATAVCSLGEESWLEADAQGNLMILERQPDAPTEH 1012

Query: 633  ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY 692
            ++ ++    E HLGE VN+ R   L +   ++D+  +P     TV+G + V+A++  E  
Sbjct: 1013 DQKQMRTTSEMHLGEQVNKIR--PLQITATENDI-IVPKAFLATVDGSLYVLANISAEYQ 1069

Query: 693  LFLEKLQTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLD 743
              L   Q  L  +++ +G        G +  QWR F N K+   A   F+DG+LIE FLD
Sbjct: 1070 SILLPFQERLAGIVRYLGQAAPEDNEGPSFSQWRGFRNAKRMAAAPFRFVDGELIERFLD 1129

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            L   R + + + +  SVE +   VEEL R+H
Sbjct: 1130 LDELRQEAVVEGLGPSVEAMRNMVEELRRMH 1160


>gi|400600376|gb|EJP68050.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
          Length = 1174

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 223/821 (27%), Positives = 399/821 (48%), Gaps = 71/821 (8%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCS 57
            QL++++L  D++  Y+  ++   N GPI+DF ++D+  +            GQ ++V   
Sbjct: 369  QLLRIDL--DSRTLYI--IKSLSNNGPILDFAIMDMGNRDGDNHQGNVFSSGQTRIVAGC 424

Query: 58   GAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            GAY+DGSLR +R+G+G+ +   + EL+  +G++ ++S      D  LV SF++ETRI  M
Sbjct: 425  GAYRDGSLRSIRSGVGLEDCVILDELENTRGLFMIKSRGSRLVDV-LVASFVTETRIFLM 483

Query: 117  NLEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY 175
             LEDE+EE  +  G   + +TL         L+QVT   V +     R   + W     +
Sbjct: 484  -LEDEVEELYDWCGLNLEVETLIAATLPGYDLLQVTRTDVAIFHFDDRPEIDSWVKTKSW 542

Query: 176  ------SVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-----LEYEISCLDIN 224
                   +  A+ N   VLL   G  +V L I   +   V+  Q        ++SCL   
Sbjct: 543  VNESEGEITSASYNDKWVLLCIDGTTIVSLNIEKNLEACVQRYQGTDPSQSDQVSCLH-- 600

Query: 225  PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI----IPRSVLLCAFEGIS 280
                +P       VG W    + I  L  LN    E+L   +    +PR + L       
Sbjct: 601  ---ASPDVMDFGVVGWWNSGKITIVDLATLNAKHGENLQQTMDAASVPRDIALVQLHPPD 657

Query: 281  Y----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF-----SSKNTTHVFA 331
                 LL AL DG + +F ++++  EL+ +K V+LG+ P  L        +S  T+ +FA
Sbjct: 658  ISGPTLLVALEDGTVTSFDVSVENLELSGKKTVTLGSSPARLHILPEPDDTSDGTSSIFA 717

Query: 332  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 391
             ++  ++IYSS  +L+YS       + + PF+S  FP  + ++ +  + I  +D  +  H
Sbjct: 718  TTEHSSLIYSSEGRLVYSATTADNATCVVPFDSYGFPHCILVSTDKNVRICRVDKERLTH 777

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFIST-YPL- 448
            ++S+P+ E  RR+ +   ++ FA+ C  K+     E     V+L+D+  F+ + T  PL 
Sbjct: 778  VKSLPVHETVRRVAYAPGAKAFALGCIKKDLIQNAEVITSSVKLVDEIMFQELGTPLPLA 837

Query: 449  --DTFEYGCSILSCSFSDDSNVY---YCVGTAYV----LPEENEPTKGRILVFIVEDGK- 498
               T E   S++     D +      + VGT++V    + E  E T+GRILV  V++ + 
Sbjct: 838  ASSTLEMVESVIRAELPDPTGALVERFVVGTSFVNDAEVGEAGE-TRGRILVLGVDEKRQ 896

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 558
            L  I     KGA   L   +  ++A + + + +Y +   +     LQ    +      + 
Sbjct: 897  LYTIVSHNLKGACRCLGILDEYIVACLAKTVVVYSYTEENSTEGYLQKLAAYRPASFPVA 956

Query: 559  VQTRGDFIVVGDLMKSISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            +   G+ I V D+M+S+SL+ +      E G +EE+AR + + W ++V  L  + +L  +
Sbjct: 957  LDISGNMIGVADIMQSLSLVEFTPPKDGEPGKLEEKARHFQSAWATSVCHLGGERWLETD 1016

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
               N+  + +N +  T+ +R RLE+  E +LGE +N+ +  ++    P  +V   P    
Sbjct: 1017 AQGNIIVLARNPDAPTEHDRSRLEITSEMNLGEQINKIQRLNVA---PADNVVVSPKAFL 1073

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFL 733
             ++ G + +   +  +    L  LQT + K +K  GG++ + WR+F N+ +  D    F+
Sbjct: 1074 ASIEGTLYLYGDIAPKYQDLLITLQTTIEKYVKTTGGISFDAWRAFRNQAREADGPFRFV 1133

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            DG+++E FLDL +     + + + ++VE++   +EEL R+H
Sbjct: 1134 DGEMVERFLDLRKQTQAALCQDLGLNVEDVRNMIEELRRMH 1174


>gi|322700871|gb|EFY92623.1| DNA damage-binding protein 1 [Metarhizium acridum CQMa 102]
          Length = 1121

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 218/825 (26%), Positives = 406/825 (49%), Gaps = 76/825 (9%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDG 63
            L+ D     + +++   N  PI+DF ++D+  +            GQ ++V   GAY DG
Sbjct: 307  LRIDIDAQVMVLVKTLSNNAPILDFAIMDMGNREGDSQFGNAFSSGQARIVAGCGAYHDG 366

Query: 64   SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR +R+G+G+ +Q  + E+Q  KG+++LRS      DT LVVS +++TR+L  +   ++
Sbjct: 367  SLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHESSHVDT-LVVSSVADTRVLRFDSAGDI 425

Query: 123  EET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            EE    +G     +TL   +    +L+QVT  S  L+ S S      W +P G ++  A+
Sbjct: 426  EEVYAFQGLTLDMETLLAVNISDGRLLQVTPKSAVLLDSESGVNLCSWDAPSGKAITAAS 485

Query: 182  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIGENPSYSQI 235
            AN    LL+  G  LV L + D +   ++    +       +ISCL  +   ++P    I
Sbjct: 486  ANKGWALLSIDGSSLVSLNLHDNLAAVLRDTSGDESSGQPDQISCL--HAARDSP---DI 540

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALG 287
              VG WT  ++ I  L  L  +  E L        +PR + L            LL AL 
Sbjct: 541  GVVGWWTSGTISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQLHPPQVSGPTLLIALE 600

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKL 346
            DG+++ F ++M+   ++ RK V+LG+ P  L     ++ T +VFA ++  ++IYS+  ++
Sbjct: 601  DGNVVTFDMSMQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTEHASLIYSAEGRI 660

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS     + +++ PF+S AFP+S+ ++ +  + +  ID  +  H++++ + E  RR+ +
Sbjct: 661  IYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKTLSVKETVRRVAY 720

Query: 407  QEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFE-------FISTYPLDTFEYGCSIL 458
                + F +  +K +    EE      R++D+  F+       F ++  L+  E   +++
Sbjct: 721  SPTLKVFGLGCIKKELIHNEEVITSSFRIVDEIIFQELGKPFIFNTSTSLEMVE---TVI 777

Query: 459  SCSFSDDSNVY---YCVGTAYVLP----EENEPTKGRILVFIV-EDGKLQLIAEKETKGA 510
                 D +      + +GT++V      EEN+ T+GRILV  V E+ ++  I     KGA
Sbjct: 778  RAELPDSTGNLAERFIIGTSFVTDDDAIEEND-TRGRILVLGVDENRQVYQIVSHNLKGA 836

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
               L+     ++A +++ + +Y ++        LQ    +      L +   G+ I V D
Sbjct: 837  CRCLSTLGEHIVAGLSKTVVVYNYVEETTVFGSLQKLAAYRPASFPLGLDISGNIIGVVD 896

Query: 571  LMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            LM+S++L+ +   ++G+   +EE AR Y   W ++V  LD + +L A+   N+  +++N 
Sbjct: 897  LMQSLTLVEFIPSKDGSRAKLEEVARHYQPGWATSVTNLDGERWLEADAQGNIIVLQRNP 956

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSL-----VMRLPDSDVGQI-----------P 670
            E  T+++R +LEV  E ++GE +N+ R   +      +  P + +G +            
Sbjct: 957  EAPTEQDRSKLEVTSEINIGEQINQIRRLHVASNENAVVSPKAFLGSVGLSETTINCWTQ 1016

Query: 671  TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
             +I   + G + +   +  +    L   Q  L+  I   G ++   WR+F N+ +  D  
Sbjct: 1017 LLILVQIEGTLYLFGEIAPKYQDLLLTFQARLQDYIYAPGNVSFNLWRAFRNKAREGDGP 1076

Query: 731  -NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
              F+DG+++E FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1077 FRFVDGEMVERFLDLDEAKQELVCEGLGPSVEDMRNMIEELRRMH 1121


>gi|387219217|gb|AFJ69317.1| dna damage-binding protein 1a, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 383

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 170/381 (44%), Positives = 226/381 (59%), Gaps = 33/381 (8%)

Query: 143 IYNQLVQVTSGSVRLV--SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
           +   LVQVT  SVRL+  +S S  L +EW S  G  + VA  NA QV+LA  GG +VYLE
Sbjct: 4   VGEMLVQVTDASVRLLDLASASSPLLSEWISAHGTRITVAAGNAMQVVLALSGGEVVYLE 63

Query: 201 I--GDGILTEVKHAQLEYEISCLDINPI------GEN---------------PSYSQIAA 237
           +      L E     LE+E+SCL ++P+      GE+               P  + + A
Sbjct: 64  LKANQRALEEKARIHLEHEVSCLSVHPLIPGPVPGEDGAEEAMQVEDGREEAPPSAFLVA 123

Query: 238 VGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG-ISYLLCALGDGHLLNFLL 296
           VG WTD+SVR+ +LP L  + +  LG +   RSVLL   +  I YLL  LGDG L++F +
Sbjct: 124 VGTWTDLSVRLLALPSLQSLHRCELGSDTQARSVLLITLQADIHYLLVGLGDGFLVSFAV 183

Query: 297 NM--KTGELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNK-KLLYSNVN 352
            +  KT  L  RKKVSLGTQP++L  FSS      VF  S+RPTVI+ S   KLLYSNVN
Sbjct: 184 ALEGKTPALGPRKKVSLGTQPLSLTPFSSTAAEPCVFVCSERPTVIHVSKADKLLYSNVN 243

Query: 353 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 412
             EV+ M PF+SA FPD LA+A E  L IGT+DDIQKL I+++PLGE PRRI H  Q+  
Sbjct: 244 TSEVTLMAPFHSALFPDCLALASETGLRIGTVDDIQKLRIQTVPLGESPRRIAHIPQAGV 303

Query: 413 FAICSLKNQSCAE--ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
            A+ + K  +  E  E E ++VR LDD +FE +  + L   E  CS+ +C+F+ D   Y 
Sbjct: 304 LAVLTAK-YAVGENGEEETNYVRFLDDASFEAVGAFELRPMELACSVAACTFAKDPREYL 362

Query: 471 CVGTAYVLPEENEPTKGRILV 491
            VGT   L +E+EP +GR++V
Sbjct: 363 VVGTCMALEDEDEPREGRLIV 383


>gi|389744702|gb|EIM85884.1| hypothetical protein STEHIDRAFT_121882 [Stereum hirsutum FP-91666
            SS1]
          Length = 1255

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 234/801 (29%), Positives = 376/801 (46%), Gaps = 82/801 (10%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            KG Y+EV+  + N+ PI+D    D +  G   +VTCSG    GSLR++RNG    E+A V
Sbjct: 451  KGKYLEVVHSWRNIAPILDAVKADTDGSGLPHIVTCSGGKSTGSLRVIRNGADFQEKAVV 510

Query: 81   E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG---FCSQTQT 136
            + L  + G+W+LRS   D   ++LV S   ET +      + L   E      F     T
Sbjct: 511  DGLDNMTGLWALRSHNSDKDHSYLVASDKDETHLFRFEGPESLRRVESSSESYFRMNKPT 570

Query: 137  LFCH---DAIYNQLVQVTSGSVRLVSSTSR----ELRNEWKSPPGYSVNVATANASQVLL 189
            L      D   + ++QVTS  V+L+   +      L + W    G  + +A+ + +QVLL
Sbjct: 571  LAVANVGDLDSSLILQVTSDKVQLLEFDAVLEIFHLSSHWSPESGKQITLASISPTQVLL 630

Query: 190  ATGGGHLVYLEIGDG-----ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 244
            A  GG +V L +        + T + +A++   +SC   N +G         AV  W   
Sbjct: 631  ALDGGTVVLLGLDKSRNMTVLSTRLYNAEIS-ALSCALPNALG---------AVSFWDSD 680

Query: 245  SVRIFSL----PDLNLITKEHLGGEIIPRSVLLCAFEGIS---YLLCALGDGHLLNFLL- 296
             + + SL    P L+ +T   +G     RS+LL  F+  S    LL  L +G ++ F++ 
Sbjct: 681  RIELVSLGGSTPLLSTVTSREIGSSARARSILLHKFDSTSSEMQLLVGLTNGIMVAFVVA 740

Query: 297  --NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
                KT EL DRK  ++G  P+ L        T V A+  R  V++    +L  S V L 
Sbjct: 741  SSETKTPELQDRKTFAMGNMPVLLVKVMVDGHTSVLASGSRSVVVFWEKGRLKTSPVMLN 800

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI---PLG-EHPRRICHQEQS 410
             +    P ++   P S+ +A   +L IG++  + K+HI  +   P G ++PRRI +   +
Sbjct: 801  NIFAGAPVDTPWSPSSVVLATGSKLIIGSVHGLDKMHIVPVTATPFGLDNPRRIVYDSHA 860

Query: 411  RTFAICSLKNQSC---AEESEMHFVRLLDDQTFEFISTYPL----DTFEYGCSILSCSFS 463
              FA+   + +      EE      +LLDD TFE I   P     D  +   +I +    
Sbjct: 861  SVFAVACTRIEPAPVFGEEVSRGSFKLLDDITFELIGEVPFAENTDQMQEITAIHAFQHV 920

Query: 464  DDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDGKLQL----IAEKETKGAVYS 513
            + +    +YCVG      +E EP+ G + +F       DG ++     + ++E  G VY+
Sbjct: 921  EGNIAISHYCVGLVTYQLDEKEPSHGELHIFSKGGTEPDGTVKADLLEVVKQEVSGCVYA 980

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTREL---QSECGHHGHILALYVQTRGDFIVVGD 570
            L +F G ++AAIN  +  +K  L   GT      + E  H+  + +L V   G ++++GD
Sbjct: 981  LASFEGYIVAAINSTVSFFK--LDTSGTEATLVKKHEWNHNYLVTSLVVS--GSYLLIGD 1036

Query: 571  LMKSISLL--IYKHEEGAIEER----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
             + S+S+L  I   E G I E+    ARDY   W  +++    +  +GA ++ NLF+   
Sbjct: 1037 AISSVSVLQVIQVDENGEITEKLKTVARDYGPLWPVSLQGWGKEGVIGANSDCNLFSFTL 1096

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
                    ++  L+  G +HL + VN+F HG++       D+      +F T +G IG++
Sbjct: 1097 Q---PVTPQKTVLDRDGHFHLDDHVNKFLHGTVHSSEKAEDLDIEARSLFFTASGRIGLV 1153

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK----NFLDGDLIES 740
              +  E  L +  LQ NL  V+K V G  H++WR+  + +   DA      FLDGD IE 
Sbjct: 1154 LDMGKELSLHMTALQRNLNGVVKDVSGTTHKRWRAPVSGRGPSDADAEAYGFLDGDFIEQ 1213

Query: 741  FLDLSRTRMDEISKTMNVSVE 761
            FL+      DE+S  M   +E
Sbjct: 1214 FLN-----YDELSPEMKRIME 1229


>gi|449540702|gb|EMD31691.1| hypothetical protein CERSUDRAFT_109269 [Ceriporiopsis subvermispora
            B]
          Length = 1265

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 234/801 (29%), Positives = 383/801 (47%), Gaps = 92/801 (11%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            KG ++EVL+ + N+ PI+D  + DL+  GQ Q++TCSG    G+L++VR G    E A V
Sbjct: 450  KGQFIEVLDTFQNMAPIMDAVLADLDDSGQSQIITCSGGRNSGALKVVRAGADFQELARV 509

Query: 81   E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE--TEIEGFCSQTQTL 137
              + GI  +W +RS ++   D+ LV S  +ET +   +  D + +  +  + F +   TL
Sbjct: 510  NGITGITSLWPVRSRSEHSTDSHLVASTETETYVFKFDSSDVITQLDSSADEFITTAPTL 569

Query: 138  FCHDAIYNQLVQVTSGSVRLVSSTSRE-------------------------LRNEWKSP 172
                A+ N   +V++ +   VSS+  +                         L  E   P
Sbjct: 570  ----AVANIPRRVSTNASGRVSSSYVDSSLVIQVTPEKITLLEYGAALGLFSLVGEGWDP 625

Query: 173  PGYS-------VNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-------LEYEI 218
                       +  A  NASQ+++   GG +  L + D    +V+ ++          ++
Sbjct: 626  KSQGAIGGRRRIVAADVNASQIVVGLDGGKVCLLNLADNSRFQVQRSRDFADPVYGPLDV 685

Query: 219  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP--DLNLITKEHLGG-EIIPRSVLLCA 275
            S +   P     +++   AV  W    V+I S+   D  L T   + G   +PRSVLL  
Sbjct: 686  SAVSCVPFDRTKNFATNIAVAFWGTNKVQILSMSSQDATLATVCEVSGLPSLPRSVLLHN 745

Query: 276  F---------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNT 326
            F         +   ++L  L DG +++F   +   EL ++K  SLG  P++L      + 
Sbjct: 746  FGTGRTKKEPDYHPHVLVGLVDGSVISF--KVVENELKEKKVFSLGIAPVSLSRCEVDDK 803

Query: 327  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 386
              VFA   R +V+Y   ++L  S V +K+++     N++ F  SL +A    L IGTI  
Sbjct: 804  ITVFAVGSRTSVLYWDKQRLTNSPVMIKDMTVGASLNTSYFRSSLVLAASSGLIIGTIRG 863

Query: 387  IQKLHIRSIPLG-EHPRRICHQEQSRTFAI-C--SLKNQSCAEESEMHFVRLLDDQTFEF 442
            + K+ IRSIP G  +PR I +  + + F + C  ++  +    +      +++D  TF+ 
Sbjct: 864  VDKMQIRSIPFGLTNPRWITYHSRLKLFGVGCNHTMPLRLGEFQGTTSSFKIVDATTFDG 923

Query: 443  ISTYPLDTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV------- 494
            +  + L   E   S+++    +D  +  +CVGTA++  EE EP  GR+L+F +       
Sbjct: 924  LWDFELQANEEVTSVMALPDGTDGRSPSFCVGTAFLEVEETEPRSGRLLLFAIGSDGATS 983

Query: 495  -EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR-ELQSECGHHG 552
              DG+L+L+A ++ KG V+ + + N  + AAI+  + L+   LR+   +  LQ     + 
Sbjct: 984  SADGELRLVATQDVKGCVFQITSVNSFIAAAISSNVVLFA--LRNTNKQYALQQVADWNH 1041

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
            +     + + GD ++VGD + S+SLL  +  +  IE  +RDY      AVE   ++  +G
Sbjct: 1042 NYFVTNLASHGDLLIVGDAISSVSLL--RVSDSRIECLSRDYGPLRPVAVEATAENQIIG 1099

Query: 613  AENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI-- 669
            A +  NLF+   ++ +G     R  LE  G YHL + V +F  G LV    DS  G    
Sbjct: 1100 ANSYCNLFSFALQHIDG-----RKVLERDGSYHLDDIVKKFVPGGLVA--ADSSTGYTLR 1152

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            P  +F + +G IGVI  +  E  L L  LQ N+ K IKG G  NH +WR+  N +   DA
Sbjct: 1153 PRQLFFSSSGRIGVIIDVDDELSLPLTSLQMNMAKRIKGPGDTNHTEWRAPTNARGRTDA 1212

Query: 730  K----NFLDGDLIESFLDLSR 746
            +     FLDGD IE FL   R
Sbjct: 1213 EASAFGFLDGDFIEQFLTHPR 1233


>gi|19114492|ref|NP_593580.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe 972h-]
 gi|46395602|sp|O13807.1|DDB1_SCHPO RecName: Full=DNA damage-binding protein 1; AltName:
            Full=Damage-specific DNA-binding protein 1
 gi|2330717|emb|CAB11219.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces pombe]
          Length = 1072

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 215/772 (27%), Positives = 399/772 (51%), Gaps = 70/772 (9%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            +E+L+ +VN+ PI DF + D   Q    ++TCSGAYKDG+LRI+RN I I   A +E++G
Sbjct: 348  LEILQNFVNIAPISDFIIDD--DQTGSSIITCSGAYKDGTLRIIRNSINIENVALIEMEG 405

Query: 85   IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA-- 142
            IK  +S+    +  +D ++ +S I ETR + ++          EG  S    L C ++  
Sbjct: 406  IKDFFSVSFRAN--YDNYIFLSLICETRAIIVSP---------EGVFSANHDLSCEESTI 454

Query: 143  ----IY--NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
                IY  +Q++Q+T+  +RL     ++L + W SP   S+   ++ A  V +A  GG +
Sbjct: 455  FVSTIYGNSQILQITTKEIRLFD--GKKLHS-WISP--MSITCGSSFADNVCVAVAGGLI 509

Query: 197  VYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT-DISVRIFSLPDLN 255
            ++ E   GI TEV   Q + E+S L      EN  Y     VG+W+ DI +  +    ++
Sbjct: 510  LFFE---GI-TEVGRYQCDTEVSSLCFTE--ENVVY-----VGLWSADIIMLTYCQDGIS 558

Query: 256  LITKEHLGGEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDR--KKVSL 311
            L     L    IPRS++     G     L  +  +G++L F  N + G++ +   ++  L
Sbjct: 559  LTHSLKLTD--IPRSIVYSQKYGDDGGTLYVSTNNGYVLMF--NFQNGQVIEHSLRRNQL 614

Query: 312  GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL 371
            G  PI L+ F SK    +FA  ++P ++Y  + KL+ + ++  E+ ++  + + +   ++
Sbjct: 615  GVAPIILKHFDSKEKNAIFALGEKPQLMYYESDKLVITPLSCTEMLNISSYVNPSLGVNM 674

Query: 372  AIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA--EESEM 429
                   +++  + +I+ L+++++ +   PRRIC       F +C    +S    E+  +
Sbjct: 675  LYCTNSYISLAKMSEIRSLNVQTVSVKGFPRRICSNSLFY-FVLCMQLEESIGTQEQRLL 733

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
             F+R+ +  T   I+ +  + +E   SI+    +DD  V   VGT +  P+++ P  GR+
Sbjct: 734  SFLRVYEKNTLSEIAHHKFNEYEMVESII--LMNDDKRV--VVGTGFNFPDQDAPDSGRL 789

Query: 490  LVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            +VF +  D  +++ AE + +G+V +L  +   ++A IN  + ++++   + GT  +++  
Sbjct: 790  MVFEMTSDNNIEMQAEHKVQGSVNTLVLYKHLIVAGINASVCIFEY---EHGTMHVRNSI 846

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
                + + + V    D I+  DLMKSI++L +  ++  + E ARDY+  W ++VEIL + 
Sbjct: 847  RTPTYTIDISVNQ--DEIIAADLMKSITVLQFIDDQ--LIEVARDYHPLWATSVEILSER 902

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
             Y   E + N   + +++      +R +L    +++LGE +N+ RH + +   P      
Sbjct: 903  KYFVTEADGNAVILLRDNVSPQLSDRKKLRWYKKFYLGELINKTRHCTFIE--PQDKSLV 960

Query: 669  IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
             P ++  TV+G + ++          L +LQ N+RKVI   GGL+H++W+ +  E +T  
Sbjct: 961  TPQLLCATVDGSLMIVGDAGMSNTPLLLQLQDNIRKVIPSFGGLSHKEWKEYRGENET-S 1019

Query: 729  AKNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 774
              + +DG LIES L L    ++EI         +++SV++L   +E L +LH
Sbjct: 1020 PSDLIDGSLIESILGLREPILNEIVNGGHEGTKLDISVQDLKSIIENLEKLH 1071


>gi|346321204|gb|EGX90804.1| DNA damage-binding protein 1 [Cordyceps militaris CM01]
          Length = 1160

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 209/806 (25%), Positives = 390/806 (48%), Gaps = 59/806 (7%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDG 63
            LQ D     +  ++   N GPI+DF ++D+  +            GQ ++V   GAY+DG
Sbjct: 367  LQIDIDSRTMHPIKLLSNNGPILDFAIMDMGNRDGDNLQGNLFSSGQARIVAGCGAYRDG 426

Query: 64   SLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR +R+G+G+ +   +E ++  + +++++S      DT LV  +I +TR+     + ++
Sbjct: 427  SLRSIRSGVGLEDLGILEEIKNTRRLFTIKSRRSKKVDT-LVACYILDTRVFLFGADGDI 485

Query: 123  EETE-IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +E     G   + ++L   +    +L+QVT   V +     +     W +P G ++  A+
Sbjct: 486  QEVNNFPGLNLRVESLLVVNLPNGRLLQVTRMDVTIKDPNEQAKALRWVAP-GANITSAS 544

Query: 182  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQ------LEYEISCLDINPIGENPSYSQI 235
             N   +LL   G  +V L I   +   V+  Q         ++SCL       + ++   
Sbjct: 545  CNGKWILLCVDGSKIVSLNIDKNLEACVQQYQGADDSNQSNQVSCLH-----ASTTFQDY 599

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFE----GISYLLCALG 287
              +G W    + I  L  L+    E L        +PR + L            LL AL 
Sbjct: 600  GVIGWWYPGRITIIDLATLSAKHVETLQQTTDAASVPRDISLVQLHPRHASGPTLLVALE 659

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKL 346
            DG ++ F ++ +   L+ +K+V+LG+ P  L      + T+ +FA ++  ++IYSS  ++
Sbjct: 660  DGTVITFNVS-EDLTLSGKKRVTLGSSPACLHVLPEADGTSKIFATTENASLIYSSEGRI 718

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS     + + + PF+S AFP+S+ ++ +  + +  ID  +  H++S+P+ E  RR+ +
Sbjct: 719  IYSATTADDATCVVPFDSEAFPNSILLSTDKHVRLCHIDKERLTHVKSLPVYETVRRVAY 778

Query: 407  QEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFEFISTYPL-----DTFEYGCSILSC 460
                + FA+  +K +    EE     V+L+D+  F+ +   PL      T E   S++  
Sbjct: 779  APGVKAFALGCIKKELIRNEEVITSSVKLVDEIIFQELGA-PLQLNASSTLEMVESVIRA 837

Query: 461  SFSDDSNVY---YCVGTAYVLPE---ENEPTKGRILVFIV-EDGKLQLIAEKETKGAVYS 513
               D +      + VGT+++      E   T+GRILV  V E+ +L  I     KGA   
Sbjct: 838  ELPDHTGALVERFIVGTSFITDADVGEASETRGRILVLGVDEERQLYTIVTHNLKGACRC 897

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L+  +  ++A +++ + +Y++         LQ    +      + +   G+ I VGDLM+
Sbjct: 898  LSVLDEYIVAGLSKTVVVYRYTEETSTEGSLQKLAAYRPASFPVALDVSGNMIGVGDLMQ 957

Query: 574  SISLLIYKH----EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA 629
            S+SL+ +      E   ++E+AR + + W ++V  LD + +L  +   N+  + +N E  
Sbjct: 958  SLSLVEFTPPKDGEPAKLQEKARHFQSAWATSVCHLDGERWLETDAQGNIMVLARNPEAP 1017

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
            T+++RGRLE+  E +LGE +N+ R  ++    P  +    P     ++ G + +   +  
Sbjct: 1018 TEQDRGRLEITSEMNLGEQINKIRKLNVA---PADNAVVSPKAFLASIEGTLYLYGDIAP 1074

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTR 748
            +    L  LQ+N+ + +K  G ++   WRSF N+ +  D    F+DG+++E FLDL    
Sbjct: 1075 KYQDLLITLQSNIEQYVKTTGDISFNAWRSFRNQTREADGPFRFVDGEMVERFLDLDELT 1134

Query: 749  MDEISKTMNVSVEELCKRVEELTRLH 774
              E+ K +  SVE++   +EEL R+H
Sbjct: 1135 QVELCKDLGPSVEDVRNMIEELRRMH 1160


>gi|395330962|gb|EJF63344.1| hypothetical protein DICSQDRAFT_153890 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1263

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 228/797 (28%), Positives = 372/797 (46%), Gaps = 93/797 (11%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + +G+++EVL+ + N+ PI+D  + D++  GQ QV+T SG    GSLR++R      EQA
Sbjct: 451  NTQGTFLEVLQNFDNIAPIMDAALADIDGSGQPQVITSSGGRNTGSLRVIRTEADFQEQA 510

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE--ETEIEGFCSQTQ 135
             ++ L G+  +W +++ + +P  T LVVS + ET + A   +D +   +  + GF +   
Sbjct: 511  RLDGLIGVTDIWPVKTHSAEPIHTHLVVSTLRETHVFAFEGKDAIAHLDPSVAGFTTHAP 570

Query: 136  TL-----------------FCHDAIYNQLVQVTSGSVRLVSSTS--------------RE 164
            T                  + H ++   +VQ+TS  ++LV                  ++
Sbjct: 571  TFVLGNIPRRVVSASGTSSYEHSSL---VVQITSEGIQLVEYEPTLFAFGKVGPGWYPKQ 627

Query: 165  LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDI 223
            +  E+    G  +  A  + SQ ++   GG L    +G     ++   +    EI  +  
Sbjct: 628  VGGEYA---GREIVAAAMSPSQFVVGLSGGRLALFNLGQKDTVQLLTTRNFPDEICAISC 684

Query: 224  NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF------ 276
             P   + +Y+   AV  W    V + +L P   L T        +PR VLL  F      
Sbjct: 685  QPYDSSKNYASAIAVSFWGSNKVAVLALDPSSPLATVCDTALPTLPRVVLLHNFGTGGRP 744

Query: 277  ---EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
               +   +LL  L DG L+ + L  + G+L DRK+  LG  P +L        T VFA+ 
Sbjct: 745  KDPDFHPHLLVGLADGTLVTYAL--RDGKLHDRKQSGLGNAPASLSVCDVDGRTVVFASG 802

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R +V++   +++  S V++K++      N+AAFP  LAIA    L IGT+  + K+ IR
Sbjct: 803  ARSSVLFWDRQRVRPSPVSVKDMIKGVTLNTAAFPSCLAIATSSALLIGTVRGLDKMQIR 862

Query: 394  SIPLG-EHPRRICHQEQSRTFAICSLKNQSCA----EESEMHFVRLLDDQTFEFISTYPL 448
            +IPLG + PRR+ +      F +   +         EE    F +LLD  +F+ +  +  
Sbjct: 863  TIPLGLDSPRRLGYHAGQGVFGVACTRTTPDRIGDYEEVTGSF-KLLDAHSFQQLHNFLC 921

Query: 449  DTFEYGCSILSC-SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK--------- 498
               E   S+L+  +    ++  + +GT Y+ PEE EP+KGRIL+F V   +         
Sbjct: 922  QADEEPSSVLTLPAHGSGASPAFALGTVYIRPEEREPSKGRILLFSVSSTEGARGANVRS 981

Query: 499  LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLYKWMLRDDG-----TRELQSECGHHG 552
            L  +A     G VY+L   +  L+ AAIN  + L+K    + G     + E  +E  H+ 
Sbjct: 982  LHTLASVNVGGCVYALANLSENLIVAAINTSVVLFKSTENEAGESTPLSLEKVTEWNHNH 1041

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
             +  + V   G+ I+VGD + S+S+L +      +E  ARDY   W  A+E   + + +G
Sbjct: 1042 FVTNVVVD--GERILVGDAISSVSVLKWNERLERLESIARDYGPLWPIAIEGTGNGL-IG 1098

Query: 613  AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 672
            A  + NLF+    S       R  LE  G YHL +  N+F  G+L      +DV +   V
Sbjct: 1099 ANADCNLFSFSLQSV----PHRTYLEKDGVYHLNDVTNKFVRGALT----STDVAEDQVV 1150

Query: 673  ----IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
                +F T  G IG I  +     L +  LQ N+ K + G GG NH + R+ +  +   D
Sbjct: 1151 KASHVFFTSTGCIGAILDMNDVTSLHMTALQRNMAKTLTGPGGDNHTKLRAPSTPRGHTD 1210

Query: 729  AK---NFLDGDLIESFL 742
            A+    FLDGD +E +L
Sbjct: 1211 AEASYGFLDGDFLEQYL 1227


>gi|322706594|gb|EFY98174.1| DNA damage-binding protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1121

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 223/826 (26%), Positives = 408/826 (49%), Gaps = 78/826 (9%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVTCSGAYKDG 63
            L+ D     + V +   N  PI+DF ++D+  +            GQ ++V   GAY DG
Sbjct: 307  LRIDIDAQVMVVAKALSNNAPILDFAIMDMGNREGDSQFGNAFSSGQARIVAGCGAYHDG 366

Query: 64   SLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR +R+G+G+ +Q  + E+Q  KG+++LRS      DT LVVS +++TR+L  +    +
Sbjct: 367  SLRSIRSGVGLEDQGILDEIQDTKGLFTLRSHQSSHVDT-LVVSSVADTRVLRFDSAGGI 425

Query: 123  EET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            EE    +G     +TL   +    QL+QVT  S  L+ S S      W +P G ++  A+
Sbjct: 426  EEVYAFQGLTLDMETLLAVNISDGQLLQVTPKSAVLLDSESGVNLCSWDAPSGKAITAAS 485

Query: 182  ANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY------EISCLDINPIGENPSYSQI 235
            AN    LL+  G  LV L + D +   ++    +       +ISCL  +   ++P    I
Sbjct: 486  ANKGWALLSIDGSLLVSLNLHDNLAAVLRDTSGDESSTQPDQISCL--HAARDSP---DI 540

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGISY----LLCALG 287
              VG W   ++ I  L  L  +  E L        +PR + L            LL AL 
Sbjct: 541  GVVGWWASGTISIVDLATLQPLHGEPLRQTEDSASVPRDIALVQLHPPQVSGPTLLIALE 600

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKL 346
            DG+++ F ++++   ++ RK V+LG+ P  L     ++ T +VFA ++  ++IYS+  ++
Sbjct: 601  DGNVVTFDMSIQGYTISGRKSVTLGSSPARLHVLPQEDGTCNVFATTEHASLIYSAEGRI 660

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
            +YS     + +++ PF+S AFP+S+ ++ +  + +  ID  +  H++++ + E  RR+ +
Sbjct: 661  IYSATTADDATYVAPFDSEAFPNSIVLSTDSHIRLSHIDKERLTHVKTLSVKETVRRVAY 720

Query: 407  QEQSRTFAICSLKNQSCA-EESEMHFVRLLDDQTFE-------FISTYPLDTFEYGCSIL 458
                + F +  +K +    EE      R++D+  F+       F ++  L+  E   +++
Sbjct: 721  SPTLKVFGLGCIKKELIQNEEVITSSFRIVDEIIFQELGKPFIFNTSTSLEMVE---TVI 777

Query: 459  SCSFSDD-SNVY--YCVGTAYVLP----EENEPTKGRILVFIV-EDGKLQLIAEKETKGA 510
                 D   N+   + +GT+++      EEN+ T+GRILV  V E+ ++  I     KGA
Sbjct: 778  RAELPDSMGNLAERFIIGTSFITDDDAIEEND-TRGRILVLGVDENRQVYQIVSHNLKGA 836

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGD 570
               L      ++A +++ + +Y ++        LQ    +      L +   G+ I V D
Sbjct: 837  CRCLGTLGEHIVAGLSKTVVVYHYVEETTVFGSLQKLAAYRPASFPLSLDISGNIIGVVD 896

Query: 571  LMKSISLLIY-KHEEGA---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
            LM+S++L+ +   E+G+   +EE AR Y   W ++V  LD + +L A+   N+  +++N 
Sbjct: 897  LMQSLTLVEFIPSEDGSRAKLEETARHYQPGWATSVAHLDGERWLEADAQGNIIVLQRNP 956

Query: 627  EGATDEERGRLEVVGEYHLGEFVNRFRHGSL-----VMRLPDSDVGQI---PTVI----- 673
            E  T+++R +LEV  E ++GE +N+ R   +      +  P + +G +    T+I     
Sbjct: 957  EAPTEQDRSKLEVTSEMNIGEQINQIRKLHVASNENAVVSPKAFLGSVGLSETIITCWNQ 1016

Query: 674  ---FGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
                  + G + +   + P+ Q L L   Q+ L+  I   G ++   WR+F N+ +  D 
Sbjct: 1017 LLMLVQIEGTLYLFGEIAPNYQDLLL-TFQSRLQDYIYAPGNVSFNLWRAFRNKAREGDG 1075

Query: 730  K-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
               F+DG+++E FLDL   + + + + +  SVE++   +EEL R+H
Sbjct: 1076 PFRFVDGEMVERFLDLDEAKQELVCEGLGPSVEDMRNMIEELRRMH 1121


>gi|328858656|gb|EGG07768.1| hypothetical protein MELLADRAFT_105631 [Melampsora larici-populina
            98AG31]
          Length = 1216

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 245/830 (29%), Positives = 391/830 (47%), Gaps = 98/830 (11%)

Query: 20   AKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS 79
            A+    EV+  Y NL PI D CVVD       Q+VTCSGAY+DGSLRI+ +GI + +   
Sbjct: 410  AQDCQPEVVANYPNLAPISDVCVVDQSEGFDHQLVTCSGAYQDGSLRIITHGITLTDLGM 469

Query: 80   VELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAM---NLEDELEETE-IEGFCSQTQ 135
            + + G + +WS+   T       L+V F +ETR L +       ++EE +   GF S  +
Sbjct: 470  LPIAGAEHIWSI--DTPHSPQVTLIVGFRNETRFLIIENDQFSQDVEELDSFSGFKSDRR 527

Query: 136  TLFCHDAIYNQ------LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            T+     I          +QVT   V +V    R     W+      + VA   AS  ++
Sbjct: 528  TILAGQIISQGHHVQAFPIQVTQEEV-IVGEMFR-----WEPTSNDLITVAAIGASLTVV 581

Query: 190  ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
            A     ++ L + D +L + +  +   E+SCL I+P        ++ AVG W   S+ + 
Sbjct: 582  AL-QREVLLLHVKDNLLVQSESIRFPNEVSCLAIDP------SQKVLAVGQWISNSIALV 634

Query: 250  SLPDLNLITKEHLGGEIIPRSVLLCAF-EGI-SYLLCALGDGHLLNFLLN-MKTGELT-- 304
            SL  +N+ T    G +    SVL   F EGI  +LL  + DG L++  L  ++ G L   
Sbjct: 635  SLDQMNVSTTIETGSDFGVHSVLFTNFGEGIDPHLLAGMDDGELISIKLQGLENGSLVQE 694

Query: 305  -DRKKVSLGTQPITLR-------TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 356
              R+ V LG +PIT+        T        V+  S+ PT++   + +L Y  V L + 
Sbjct: 695  QSRRTVVLGHRPITMSRIVLDIPTDQQLGKPAVWIHSEHPTLMIEVDGRLKYRPVALGDA 754

Query: 357  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICHQEQSRTFAI 415
            +      +        +  EG + +G ID ++K+HI  IPL GE P+RI H +  R + +
Sbjct: 755  TDAIKIGTRGVG---VVTSEG-IRLGRIDSLEKIHISKIPLGGEQPKRIAHSKSMRAYGV 810

Query: 416  CSLK---NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCV 472
              +    NQ   E  +   V+++DD TFE +  + L + E G SI +     D    + +
Sbjct: 811  VCVSQKVNQQTGELDKGSSVKIIDDVTFELLFDFQLLSIEQGTSIAAIELGKDLIEDFII 870

Query: 473  GTAYVLPEENEPTKGRILVFIV-----EDGKLQLIAEK---ETKGAVYSLNAF-NGKLLA 523
            GT +V P E++   GRIL   +     ++G L+    K   + KG V+ L     GK +A
Sbjct: 871  GTGFVNPNESQSNTGRILTIGLSSKHDQEGNLREFKLKRMTKVKGTVHGLGGLPGGKFVA 930

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
            + N  +  +     ++       +    G + +  V T  ++I+VGDL KSI +L +  +
Sbjct: 931  SANAFVHAFGINEEEEDEGFEVLDTWGGGFV-SQTVLTEKNWIIVGDLYKSIVVLEFDLK 989

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV--RKNSEGATDEER------- 634
            + +++   RDY+A  +  + ++ D +++ A+  FNLFTV  R+  +G  +E+        
Sbjct: 990  KFSLKVLGRDYSAMSVRPIGMISDRVFVAADTEFNLFTVEMRERQKGLKEEDEDEEGLSV 1049

Query: 635  -------------------------GRLEVVGEYHLGEFVNRFRHGSLVMRLPD---SDV 666
                                       L+ VG +HLGE VN F+ GSLV  L      D+
Sbjct: 1050 EEEKGDDDEWEEEERRMRVEKVFNDDHLDTVGGFHLGENVNHFKAGSLVKSLKHFYGQDL 1109

Query: 667  GQIPTVIFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
                 +IF +  G IGVI  L   + Y  L+ L+  L+K I  +GGL+  ++R F N+ K
Sbjct: 1110 KYGGKLIFVSSTGGIGVIIKLEDLKIYKHLKALEDRLKKEILSIGGLDSTEFRKFKNKWK 1169

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTMN-VSVEELCKRVEELTRLH 774
             VD   FLDGDLI+   + S  R   I +  + V ++E+   VEEL+  H
Sbjct: 1170 KVDGCEFLDGDLIQRLYNDSFKRKSLIKEDQDEVGIDEV---VEELSWFH 1216


>gi|258572939|ref|XP_002540651.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237900917|gb|EEP75318.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1144

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 223/800 (27%), Positives = 400/800 (50%), Gaps = 61/800 (7%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGAYKDGSLRIVRN 70
            +GS+ E+++   N+ PI+DF V+DL  +G          Q ++VT SGA+ DGSLR VR+
Sbjct: 360  EGSF-EIIQTLSNIAPILDFTVMDLGHRGDTLTHEFSSGQARIVTGSGAFHDGSLRSVRS 418

Query: 71   GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET-EIE 128
            G+G+ +   +  ++ I  +W L +   +     L+++F++E+R+   + + E+EE  E  
Sbjct: 419  GVGMEDLGVLGAMEHITDLWGLSAFCAEENCDTLLLAFVNESRVFHFSPDGEVEEKDEFL 478

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY-SVNVATANASQV 187
            G      TL   +    +++QVT  + R+    S  +   W SP G+  +  A  N   +
Sbjct: 479  GLLLGETTLHASNLAGCRILQVTERTARITDVESELVIWHW-SPSGHQKITAAAVNEQYL 537

Query: 188  LLATGGGHLVYLEIGDGI-LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            +L  GG   V  +I   I ++  K  +   ++S + +     +P+ + I       +IS 
Sbjct: 538  VLMIGGQEAVIFDIASDIQVSGPKTFKANKQVSGVTLT---SSPAQACIFCFPQSAEIS- 593

Query: 247  RIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGE 302
             I +L DL +   E LG  G+ +PRSVL+          L  ++ DG + +F LN +   
Sbjct: 594  -IVNLTDLTIRHTETLGEPGDAVPRSVLVANMIPSKPPSLFVSMADGSVFSFSLNAEDYS 652

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTT-HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCP 361
            L++  K+ LG++    +     +   +VFA  D P++IY+S  +++YS VN  + + +C 
Sbjct: 653  LSNANKLVLGSEAPVFKLLPRGDGLFNVFATCDHPSLIYASEDRIVYSAVNSDKATRICH 712

Query: 362  FNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 421
            FN+ A+P ++A+A   E+ I  +D  +   I+++ +    RRI +    R F + +++  
Sbjct: 713  FNAEAYPGAIAVATPDEIKIALVDAERTTQIQTLMINGTVRRIAYSAAERAFGLGTVRRS 772

Query: 422  --SCAEESEMHFVRLLDDQTFEFISTYPLDTFEY-GCSILS--CSFSDDSNV-----YYC 471
                AEE + +F+ L D+  F  +S + L++ E   C I +   +F+   N       + 
Sbjct: 773  LVQNAEEVKSYFI-LSDEIMFRQLSVFDLNSNELVECVIRTEHPAFNGQQNNGRPKDIFI 831

Query: 472  VGTAYVLPEE--NEPTKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
            VGT+ + P E     TKGRIL+F V  + +L++++E   +GA  +L   NGK++AA+ + 
Sbjct: 832  VGTSVLDPAEAPESQTKGRILIFDVGVNRELRMVSEFPVRGACRALAMVNGKIVAALMKS 891

Query: 529  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG--- 585
            + +      +  + ++  E  +      + +    + IVV DLMKSISLL Y+  E    
Sbjct: 892  VVILSMKKGNSYSIDIGKESSYRTSTAPVDLSVTDNIIVVADLMKSISLLEYQAGEAGQP 951

Query: 586  -AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +++E AR Y   W +    + ++ +L ++   NL  + +N+ G T++++ R+++  E  
Sbjct: 952  DSLKEVARHYQTLWTTTAAPIAENAFLVSDAEGNLVVLNRNTTGVTEDDKRRMQITSELR 1011

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQ-IPTVIFGTVNGVI---GVIASLPHEQYLFLEKLQT 700
            LG  VNR R     M L  S     IP     T +G I   GVIA    +    L +LQ+
Sbjct: 1012 LGTMVNRIRR----MDLQASQSSPVIPKAFLATTDGSIYLFGVIAQFAQD---LLMRLQS 1064

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTM--- 756
             L   +   GG+    +R+F +  +  D    F+DG+L+E FLD      + +   M   
Sbjct: 1065 ALASFVASPGGIPFSGYRAFKSATRQADEPFRFVDGELVEQFLDCPLEVQEAVLAKMDGG 1124

Query: 757  --NVSVEELCKRVEELTRLH 774
              +V++ +L   VE L R+H
Sbjct: 1125 GRDVTLSQLKDIVERLKRMH 1144


>gi|389629928|ref|XP_003712617.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|351644949|gb|EHA52810.1| hypothetical protein MGG_16867 [Magnaporthe oryzae 70-15]
 gi|440464739|gb|ELQ34110.1| DNA damage-binding protein 1a [Magnaporthe oryzae Y34]
          Length = 1183

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 234/832 (28%), Positives = 388/832 (46%), Gaps = 79/832 (9%)

Query: 10   QLIKLNLQPDA-KG-SYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVT 55
            Q   +NL  DA KG S++E+ +   N+ PI+DF V+D+  +            GQ ++VT
Sbjct: 364  QFYDVNLFADAAKGESFLELRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVT 423

Query: 56   CSGAYKDGSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRI 113
             SGA KDGSLR VR+G+G+ +   +  E+ G+ G++SL+S   D  DT LVVSF++ETR+
Sbjct: 424  ASGAQKDGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTETRV 482

Query: 114  LAMNLEDELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 172
               + + E+EE ++++G      TL         ++ VT     L  +      + W   
Sbjct: 483  FRFDKQGEVEELSQLQGLDISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSWSPT 542

Query: 173  PGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPS 231
             G  +  A++N   VLL+  G  LV L IG D  ++     + E +ISC     +  +P 
Sbjct: 543  SGKPITHASSNGRWVLLSVDGRKLVSLNIGLDLKVSAESEERDEDQISC-----VNASPH 597

Query: 232  YSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGISYLL 283
               + AVG W+  ++ I  L  L     E L       ++ R V+L     A      L 
Sbjct: 598  LLDVGAVGFWSSGTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANPTLF 657

Query: 284  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSS 342
             +  DG ++ F+ N   G L+ RK V LGT+    R     N    +F   +  ++I+ +
Sbjct: 658  VSKDDGEVMTFVYN-DNGTLSSRKSVVLGTREARFRVLPQPNGLCSIFVTCEHSSLIHGA 716

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG------ELTIGTIDDIQKLHIRSIP 396
             ++++YS V     +++CPF++AAF D LA+A E       EL I  ID  ++  + + P
Sbjct: 717  ERRIVYSAVTAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMMTRP 776

Query: 397  LGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYG 454
            +GE+ R I +    + F + C  +  S   E      +L D+  FE   + + L+  E  
Sbjct: 777  MGENVRSIAYSSADKVFGLGCIRRVLSRGIEKVYGTFKLFDEVIFEPKGNVFALEDGEVP 836

Query: 455  CSILSCSFSD---DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-LIAEKETKGA 510
              +      D   +    + VGT Y L        GR+LVF V++ +   LI    TK  
Sbjct: 837  ECVTRAPLLDSYGEQAERFIVGTRY-LSGTGSGHGGRVLVFGVDESRSPYLIHAHSTKSG 895

Query: 511  VYSLNAFNGKLLA-AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               +   +  LL  A+ + + L ++      + +            A+ V   G  I V 
Sbjct: 896  CRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKFLKVAAFQTSSYAVDVTVHGKLIAVA 955

Query: 570  DLMKSISLLIY--------------------KHEEGAIE----ERARDYNANWMSAVEIL 605
            D+MKSI+LL Y                    K  EG+ +    E  RDY A W +AV  L
Sbjct: 956  DIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEVEGSKQAKLVEVCRDYQAMWSTAVSHL 1015

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            + D ++ A+ + NL  + +N+ G T E++ R+++  E+ LGE VN+ +    VM    ++
Sbjct: 1016 EGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQMTSEFGLGECVNKIQK---VMVETSAN 1072

Query: 666  VGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK-VIKGVGGLNHEQWRSFNN- 722
               +      T  G I +  ++ P  Q L ++  Q N+   V   +G L   QWRSF N 
Sbjct: 1073 APIVAKAFLSTTEGSIYLFGTVAPKFQSLLMD-FQANMEAHVSSPLGELQFNQWRSFRNP 1131

Query: 723  EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            E++    + FLDG+ +E FLD+      +I + ++ + E++   + E+  +H
Sbjct: 1132 EREGAGPERFLDGEFLEMFLDMEENTQIDICQGLSYTAEDMRNLIGEMKNMH 1183


>gi|440487047|gb|ELQ66855.1| DNA damage-binding protein 1a [Magnaporthe oryzae P131]
          Length = 1213

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 234/832 (28%), Positives = 388/832 (46%), Gaps = 79/832 (9%)

Query: 10   QLIKLNLQPDA-KG-SYVEVLERYVNLGPIVDFCVVDLERQ------------GQGQVVT 55
            Q   +NL  DA KG S++E+ +   N+ PI+DF V+D+  +            GQ ++VT
Sbjct: 394  QFYDVNLFADAAKGESFLELRQTIENIAPILDFAVMDMGNREGDSQLGNEYSSGQARIVT 453

Query: 56   CSGAYKDGSLRIVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRI 113
             SGA KDGSLR VR+G+G+ +   +  E+ G+ G++SL+S   D  DT LVVSF++ETR+
Sbjct: 454  ASGAQKDGSLRSVRSGVGLEDIGVITDEISGVTGLFSLKSYGSDVEDT-LVVSFLTETRV 512

Query: 114  LAMNLEDELEE-TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 172
               + + E+EE ++++G      TL         ++ VT     L  +      + W   
Sbjct: 513  FRFDKQGEVEELSQLQGLDISQPTLLVLGLDNGHVLYVTEEKATLFDAEGGVTISSWSPT 572

Query: 173  PGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPS 231
             G  +  A++N   VLL+  G  LV L IG D  ++     + E +ISC     +  +P 
Sbjct: 573  SGKPITHASSNGRWVLLSVDGRKLVSLNIGLDLKVSAESEERDEDQISC-----VNASPH 627

Query: 232  YSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLC----AFEGISYLL 283
               + AVG W+  ++ I  L  L     E L       ++ R V+L     A      L 
Sbjct: 628  LLDVGAVGFWSSGTISIIDLKTLEATQTEKLRRNEDDAVVAREVVLARVLPAEVANPTLF 687

Query: 284  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSS 342
             +  DG ++ F+ N   G L+ RK V LGT+    R     N    +F   +  ++I+ +
Sbjct: 688  VSKDDGEVMTFVYN-DNGTLSSRKSVVLGTREARFRVLPQPNGLCSIFVTCEHSSLIHGA 746

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG------ELTIGTIDDIQKLHIRSIP 396
             ++++YS V     +++CPF++AAF D LA+A E       EL I  ID  ++  + + P
Sbjct: 747  ERRIVYSAVTAHSAAYVCPFDTAAFRDCLAVATESAIDRRMELKISRIDRQRQCQMMTRP 806

Query: 397  LGEHPRRICHQEQSRTFAI-CSLKNQSCAEESEMHFVRLLDDQTFEFI-STYPLDTFEYG 454
            +GE+ R I +    + F + C  +  S   E      +L D+  FE   + + L+  E  
Sbjct: 807  MGENVRSIAYSSADKVFGLGCIRRVLSRGIEKVYGTFKLFDEVIFEPKGNVFALEDGEVP 866

Query: 455  CSILSCSFSD---DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-LIAEKETKGA 510
              +      D   +    + VGT Y L        GR+LVF V++ +   LI    TK  
Sbjct: 867  ECVTRAPLLDSYGEQAERFIVGTRY-LSGTGSGHGGRVLVFGVDESRSPYLIHAHSTKSG 925

Query: 511  VYSLNAFNGKLLA-AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               +   +  LL  A+ + + L ++      + +            A+ V   G  I V 
Sbjct: 926  CRRIATMDDDLLVIALTKTVVLVRYSETSTTSAKFLKVAAFQTSSYAVDVTVHGKLIAVA 985

Query: 570  DLMKSISLLIY--------------------KHEEGAIE----ERARDYNANWMSAVEIL 605
            D+MKSI+LL Y                    K  EG+ +    E  RDY A W +AV  L
Sbjct: 986  DIMKSITLLEYIPGVGKSAKTGGKDKATRSDKEVEGSKQAKLVEVCRDYQAMWSTAVSHL 1045

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            + D ++ A+ + NL  + +N+ G T E++ R+++  E+ LGE VN+ +    VM    ++
Sbjct: 1046 EGDSWIVADGDGNLVVLLRNTAGVTLEDKRRMQMTSEFGLGECVNKIQK---VMVETSAN 1102

Query: 666  VGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK-VIKGVGGLNHEQWRSFNN- 722
               +      T  G I +  ++ P  Q L ++  Q N+   V   +G L   QWRSF N 
Sbjct: 1103 APIVAKAFLSTTEGSIYLFGTVAPKFQSLLMD-FQANMEAHVSSPLGELQFNQWRSFRNP 1161

Query: 723  EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            E++    + FLDG+ +E FLD+      +I + ++ + E++   + E+  +H
Sbjct: 1162 EREGAGPERFLDGEFLEMFLDMEENTQIDICQGLSYTAEDMRNLIGEMKNMH 1213


>gi|407044103|gb|EKE42371.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
          Length = 1088

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 214/791 (27%), Positives = 386/791 (48%), Gaps = 56/791 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
             LIK+N     KG   E+LE + N GPI+D   +  E   +  ++ C   Y+ G+L+++ 
Sbjct: 325  HLIKIN----EKGC--EILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKLIS 378

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED---ELEETE 126
            +G+GI+     E++GI  ++       +    +L++S+   +++     E       E E
Sbjct: 379  SGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFESQQEVNQLRFNEIE 434

Query: 127  IEGFCSQTQTLFCHDAIY------NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            I+GF  + +T+ C   I       +  VQVT   + +  S   EL  + +     S    
Sbjct: 435  IKGFNRKEETI-CSGIIEIGEMKESCFVQVTREEINIFDSEQLELIQQIRLNKFIS---H 490

Query: 181  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY----EISCLDINPIGENPSYSQIA 236
            +    + L  +    +        +L E K  +  Y    +IS   I   G       + 
Sbjct: 491  SCIYDEKLYISQSNEI-------NVLNENKEIKQVYSGENDISAFTIGKEGT----EDVI 539

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF-- 294
             +  W   ++ I  + + N      + G I  +S+ +   +   Y++  +GDG +L +  
Sbjct: 540  GICYWDSNTMEIIKMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVYQM 599

Query: 295  --LLNMKTGELTDRKKV-SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
              L+ ++ GE+    KV  +G   I L+T       ++    DRPT++     K+   +V
Sbjct: 600  EELMEIE-GEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLSV 658

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 411
            N  E+  + PF      +SL +A +  + IG ID+IQ +H +S+ +G    RI   +Q  
Sbjct: 659  NCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIVVSKQEN 718

Query: 412  TFAICSLKNQSCAEES-EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
               + S + +   E+  E H V+L+D +  E   ++ L   E+  SI       D N  +
Sbjct: 719  KALLLSSEIKELKEKRVETHSVKLIDFRKMEIEDSHELKENEHALSIEQIVI--DENEMF 776

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA-AINQKI 529
             +GTA+  P E EP+ GRIL+  ++DG+L+++ EK+  GAVYS+     K LA +I +K+
Sbjct: 777  VIGTAFAKPNEVEPSSGRILIVQIKDGRLEIVFEKDVNGAVYSMKTLLKKYLAISIEKKL 836

Query: 530  QLYKWM-LRDDGTRE--LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK---HE 583
             ++++  +  +G  E  LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + 
Sbjct: 837  VVFEYQRVITNGEFEVKLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNN 896

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
            +  + E +RD+ A++ +A+E +D+D YL +++N N+     NS G  + ER RL      
Sbjct: 897  KNCLTEVSRDFYASYTTAIEFVDEDCYLSSDSNSNILIFNTNSTG-NESERFRLNNCAHI 955

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
            H+GE +N    GS+       +  Q   ++FG V G IG I  +P+E Y  L K+Q  + 
Sbjct: 956  HVGECINVMCKGSIAPTHSTYETVQKKCILFGGVTGYIGGICEIPNEIYDILIKVQNQIL 1015

Query: 704  KVIKG-VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
              +KG V     + W+   ++ K + + N +DG ++ES+L++S+ +  EI+    V+ E+
Sbjct: 1016 LQMKGIVECTTPDDWKKVIDDWKRMPSSNIIDGSIVESYLEMSKEKQCEIAHLSGVNEEK 1075

Query: 763  LCKRVEELTRL 773
            +   +E +  L
Sbjct: 1076 ISDIIENMISL 1086


>gi|449704103|gb|EMD44407.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
          Length = 1088

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 214/791 (27%), Positives = 386/791 (48%), Gaps = 56/791 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
             LIK+N     KG   E+LE + N GPI+D   +  E   +  ++ C   Y+ G+L+++ 
Sbjct: 325  HLIKIN----EKGC--EILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKLIS 378

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED---ELEETE 126
            +G+GI+     E++GI  ++       +    +L++S+   +++     E       E E
Sbjct: 379  SGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFESQQEVNQLRFNEIE 434

Query: 127  IEGFCSQTQTLFCHDAIY------NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            I+GF  + +T+ C   I       +  VQVT   + +  S   E   + +     S    
Sbjct: 435  IKGFNRKEETI-CSGIIEIGEMKESCFVQVTREEINIFDSEQLEFIQQIRFNKFIS---H 490

Query: 181  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY----EISCLDINPIGENPSYSQIA 236
            +    + L  +    +        +L E K  +  Y    +IS   I   G       + 
Sbjct: 491  SCIYDEKLYISQSNEI-------NVLNENKEIKQVYSGENDISAFTIGKEGT----EDVI 539

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF-- 294
             +  W   ++ I ++ + N      + G I  +S+ +   +   Y++  +GDG +L +  
Sbjct: 540  GICYWDSNTMEIINMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVYQM 599

Query: 295  --LLNMKTGELTDRKKV-SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
              L+ ++ GE+    KV  +G   I L+T       ++    DRPT++     K+   +V
Sbjct: 600  EELMEIE-GEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLSV 658

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 411
            N  E+  + PF      +SL +A +  + IG ID+IQ +H +S+ +G    RI   +Q  
Sbjct: 659  NCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIVVSKQEN 718

Query: 412  TFAICSLKNQSCAEES-EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
               + S + +   E+  E H V+L+D +  E   ++ L   E+  SI       D N  +
Sbjct: 719  KALLLSSEIKELKEKRVETHSVKLIDFRKMEIEDSHELKENEHALSIEQIVI--DENEMF 776

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA-AINQKI 529
             +GTA+  P E EP+ GRIL+  ++DG+L++I EK+  GAVYS+     K LA +I +K+
Sbjct: 777  VIGTAFAKPNEVEPSSGRILIVQIKDGRLEIIFEKDVNGAVYSMKTLLKKYLAMSIEKKL 836

Query: 530  QLYKWM-LRDDGTRE--LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK---HE 583
             ++++  +  +G  E  LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + 
Sbjct: 837  VVFEYQRVITNGEFEVKLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNN 896

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
            +  + E +RD+ A++ +A+E +D+D YL +++N N+     NS G  + ER RL      
Sbjct: 897  KNCLTEVSRDFYASYTTAIEFVDEDCYLSSDSNSNILIFNTNSTG-NESERFRLNNCAHI 955

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
            H+GE +N    GS+       +  Q   ++FG V G IG I  +P+E Y  L K+Q  + 
Sbjct: 956  HVGECINVMCKGSIAPTHSTYETVQKKCILFGGVTGYIGGICEIPNEIYDVLIKVQNQIL 1015

Query: 704  KVIKG-VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
              +KG V     + W+   ++ K + + N +DG ++ES+L++S+ +  EI+    V+ E+
Sbjct: 1016 LQMKGIVECTTPDNWKKVIDDWKRMPSSNIIDGSIVESYLEMSKEKQCEIAHLSGVNEEQ 1075

Query: 763  LCKRVEELTRL 773
            +   +E +  L
Sbjct: 1076 ISDIIENMISL 1086


>gi|343429611|emb|CBQ73184.1| related to UV-damaged DNA-binding protein [Sporisorium reilianum
            SRZ2]
          Length = 1505

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 225/866 (25%), Positives = 391/866 (45%), Gaps = 142/866 (16%)

Query: 25   VEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ 77
            + V+E + NLGP+V+F V D            Q ++VTCSGA   GS+R  R+G  + + 
Sbjct: 637  LAVVETWQNLGPVVEFVVDDGAGGDPTCSSGAQARIVTCSGAGPSGSIREARSGASVQDV 696

Query: 78   ASVELQGIKGMWSLRSSTD-DPFDTFLVVSFISETRILAMNLEDELEE---------TEI 127
            +S+ +   + +W + +  D   +   L++ F + T  L  + + +L +         T++
Sbjct: 697  SSLSIPNAQQIWPVHAGNDASKYSVGLLLGFATSTAYLHFDAKGDLADATDRLAATGTDL 756

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVS--STSRELRNEWKSPPGYSVNVATANA- 184
                    T++  D    QL+++T     LVS    S  L ++W  P G  V  A+AN  
Sbjct: 757  TLPTLAASTVWSSDH-QPQLLRITRSEACLVSLNDESASLLHQWVPPKGLEVTAASANVH 815

Query: 185  SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 244
             QV+LA     L++L +  G L E    QLE+E+SC+D++P+      +Q+AA G W   
Sbjct: 816  GQVVLALSDKTLLHLSVESGALVEKGKVQLEHEVSCVDVSPLVAG-KAAQLAACGFWQTR 874

Query: 245  SVRIFSLPDLNLITKEHLGGE---IIPRSVLLCAFEG---------------------IS 280
            +++I+SLP+L  + +  +  +    +PRS+LL  F                         
Sbjct: 875  TIQIYSLPELAAVGQSSVVQQRFPAVPRSILLHRFASKQTDGGSDTQSKGSLSNRDALTP 934

Query: 281  YLLCALGDGHLLNFLLNM-------KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
            +LL  LGDG L+++ L++       KT  L+D K VSLGTQ + L    +     V A S
Sbjct: 935  HLLIGLGDGTLVSYSLSLPTHDSYSKTVGLSDAKTVSLGTQALKLDALETAAGARVVAVS 994

Query: 334  -DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 392
              RPT++Y+ +K+  Y+ +  K+   +   ++       A A    + + +I  +++  I
Sbjct: 995  GSRPTLVYADSKRFSYNALKYKDQRTVATLHAGQERVFAAFALSDSVELASIGALRQRDI 1054

Query: 393  RSIPLG-EHPRRICHQEQSRTFAICSL----KNQSCAEESEMHFVRLLDDQTFEFISTYP 447
            R+ PLG   P  I        FA+C+     +  +   +     VR+LD  TFE +    
Sbjct: 1055 RTFPLGLNQPLAITQWANRGVFAVCTWAFLPRGTASKSDGPRGAVRILDQTTFETLDEIR 1114

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---------EDGK 498
            L+  E    I         +    VGT +V  + +E T+GR++ F V         E G+
Sbjct: 1115 LEPDERPNCI--TVLQAQGHEILVVGTGFVSEQASETTQGRLVGFDVSNGSSRTKEERGR 1172

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY 558
            L+ + E    G VYS+ + N +L AA+N ++++Y  +  D    E+ +          + 
Sbjct: 1173 LRKLFEHSETGNVYSVQSINNRLAAAVNSEVKIYSVV--DPRPSEVPAP--------RIR 1222

Query: 559  VQTRG----------------DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
            V+ RG                D IVVGD ++S+++L        + E ARD +  W SA 
Sbjct: 1223 VRQRGSWACSFIACNLSVIEPDRIVVGDALRSMNVLHVHPYTARLTELARDCDPFWTSAT 1282

Query: 603  EILDDD--IYLGAENNFNLFTVR------------------------------KNSEGA- 629
            ++LDD+   Y+GA+ +FNL+T +                              + + G  
Sbjct: 1283 DLLDDESQTYIGADISFNLYTTQRVPLSEEVKARIRRARERESERTVVQTIDPRTTRGPD 1342

Query: 630  -TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 688
              D     ++    +H G+ +N+F   SLV   P S+    P ++F T  G IG++A + 
Sbjct: 1343 MVDRYAHVMQRNAVWHYGDMINKFCRRSLVPD-PGSNAAVRPRLLFCTAAGAIGIVAHVR 1401

Query: 689  HEQYLFLEKLQTNLRKVIKG---------VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
             ++   L K++ N+  +++          VG + H  WR+   + +      FLD ++++
Sbjct: 1402 DDEAHLLAKVERNILSLLESSSTAAAAGVVGNIAHSDWRTLRTDHRVQAPAGFLDANVLQ 1461

Query: 740  SFLD--LSRTRMDEISKTMNVSVEEL 763
             F+D  L R + D++    N   E L
Sbjct: 1462 MFVDGRLDRQQRDKVLAGPNSETEAL 1487


>gi|183232997|ref|XP_653855.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801778|gb|EAL48469.2| damaged DNA binding protein, putative [Entamoeba histolytica
            HM-1:IMSS]
          Length = 1088

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 214/791 (27%), Positives = 386/791 (48%), Gaps = 56/791 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
             LIK+N     KG   E+LE + N GPI+D   +  E   +  ++ C   Y+ G+L+++ 
Sbjct: 325  HLIKIN----EKGC--EILETFENRGPILDMTAIHDEITNKDNLLMCCNTYQQGTLKLIS 378

Query: 70   NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED---ELEETE 126
            +G+GI+     E++GI  ++       +    +L++S+   +++     E       E E
Sbjct: 379  SGVGIDIICQNEMKGITHLYQAEMGHKE----YLIISYGDGSKVFESQQEVNQLRFNEIE 434

Query: 127  IEGFCSQTQTLFCHDAIY------NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            I+GF  + +T+ C   I       +  VQVT   + +  S   E   + +     S    
Sbjct: 435  IKGFNRKEETI-CSGIIEIGEMKESCFVQVTREEINIFDSEQLEFIQQIRFNKFIS---H 490

Query: 181  TANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEY----EISCLDINPIGENPSYSQIA 236
            +    + L  +    +        +L E K  +  Y    +IS   I   G       + 
Sbjct: 491  SCIYDEKLYISQSNEI-------NVLNENKEIKQVYSGENDISAFTIGKEGT----EDVI 539

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF-- 294
             +  W   ++ I ++ + N      + G I  +S+ +   +   Y++  +GDG +L +  
Sbjct: 540  GICYWDSNTMEIINMENGNKNHIREINGNIYGKSIEIINNQEGMYVVIGMGDGRVLVYQM 599

Query: 295  --LLNMKTGELTDRKKV-SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
              L+ ++ GE+    KV  +G   I L+T       ++    DRPT++     K+   +V
Sbjct: 600  EELMEIE-GEIPKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSICKGKIKTLSV 658

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 411
            N  E+  + PF      +SL +A +  + IG ID+IQ +H +S+ +G    RI   +Q  
Sbjct: 659  NCSEIVSIVPFKMKECMNSLVVATKENIIIGNIDEIQSIHTKSLSIGVFVSRIVVSKQEN 718

Query: 412  TFAICSLKNQSCAEES-EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
               + S + +   E+  E H V+L+D +  E   ++ L   E+  SI       D N  +
Sbjct: 719  KALLLSSEIKELKEKRVETHSVKLIDFRKMEIEDSHELKENEHALSIEQIVI--DENEMF 776

Query: 471  CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA-AINQKI 529
             +GTA+  P E EP+ GRIL+  ++DG+L++I EK+  GAVYS+     K LA +I +K+
Sbjct: 777  VIGTAFAKPNEVEPSSGRILIVQIKDGRLEIIFEKDVNGAVYSMKTLLKKYLAMSIEKKL 836

Query: 530  QLYKWM-LRDDGTRE--LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK---HE 583
             ++++  +  +G  E  LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + 
Sbjct: 837  VVFEYQRVITNGEFEVKLQEKGSCNVKLIGLYVKTLGNKILVGDLMKSISVYSFDNNGNN 896

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
            +  + E +RD+ A++ +A+E +D+D YL +++N N+     NS G  + ER RL      
Sbjct: 897  KNCLTEVSRDFYASYTTAIEFVDEDCYLSSDSNSNILIFNTNSTG-NESERFRLNNCAHI 955

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
            H+GE +N    GS+       +  Q   ++FG V G IG I  +P+E Y  L K+Q  + 
Sbjct: 956  HVGECINVMCKGSIAPTHSTYETVQKKCILFGGVTGYIGGICEIPNEIYDVLIKVQNQIL 1015

Query: 704  KVIKG-VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
              +KG V     + W+   ++ K + + N +DG ++ES+L++S+ +  EI+    V+ E+
Sbjct: 1016 LQMKGIVECTTPDDWKKVIDDWKRMPSSNIIDGSIVESYLEMSKEKQCEIAHLSGVNEEQ 1075

Query: 763  LCKRVEELTRL 773
            +   +E +  L
Sbjct: 1076 ISGIIENMISL 1086


>gi|409078983|gb|EKM79345.1| hypothetical protein AGABI1DRAFT_39860 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1236

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 220/786 (27%), Positives = 356/786 (45%), Gaps = 111/786 (14%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + +GSY+ VLER+ N+ PI+D C+VD +  GQ Q+VTCSG    GS+  VRNG    E  
Sbjct: 454  ETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTCSGGKNTGSINAVRNGADFEEIV 512

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE-DELEETEIE-------- 128
            ++  +  +  +W+L+S  ++  D+FL++SF + + ++ +N   D +     +        
Sbjct: 513  NIPGVPHVLKIWALKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAPFDNAIASGLV 572

Query: 129  ------GFCSQTQTLFCHDA----IYNQLVQVTSGSVRLVSSTSRELR-----NEWKSPP 173
                   F +  Q +   D     + + LV   +GS   +    + L+     +EW +  
Sbjct: 573  TVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTYIRIDEWNAKK 632

Query: 174  GYS------VNVATANASQVLLATGGGHLVYLEIGDG-----ILTEVKHAQLEYEISCLD 222
              +      +  A+ N+SQV LA  GG L  L + +      +++ +     + EIS + 
Sbjct: 633  NVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDCNRQPEISAIS 692

Query: 223  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT----------------------KE 260
             +P+    ++SQ   V  W    + +F+  D    +                      + 
Sbjct: 693  CSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGFKSVCKSSPLPSLVSSLRFYNFGSDQS 752

Query: 261  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
              G +  P            YLL  L DG +  F    +  EL +RK VSLG  P++L  
Sbjct: 753  SKGADYHP------------YLLAGLSDGSVATF--RWQDQELKERKIVSLGHAPVSLAV 798

Query: 321  FSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
             S   +   V AA DR  V      +L+YS + L+ ++   P N+++ P SL  A    L
Sbjct: 799  CSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSLVAATAEGL 858

Query: 380  TIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLL 435
             IG I D+ KLHIRSIP G ++PR+I HQ     F +  +  +     A E    F  LL
Sbjct: 859  HIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLSAFGVALVYTEPAEIGAHEVRKSFFSLL 918

Query: 436  DDQTFEFISTYPLDTFEYGCSILSCSFSDDS--NVYYCVGTAYVLPEENEPTKGRILVFI 493
            DD +FE ++ +  D  E   SI+  S   D     ++ +GT    PEE EP KGRIL+  
Sbjct: 919  DDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTFIFRPEEFEPDKGRILLIS 978

Query: 494  V----------EDGKLQLIAEKETKGAVYSLNAF-----NGKLLAAINQKIQLYKWMLRD 538
            +          +  +L L A  E +G VY+L          +++AA+N  + L+     D
Sbjct: 979  ISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVARIVAAVNSSVNLFSL---D 1035

Query: 539  DGTR------ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
              T+       L+     + + L   +   G+ + VGD + S+SLL  K  E   +  AR
Sbjct: 1036 IDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGNHVFVGDQISSVSLL--KCTEEKFQTVAR 1093

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
            DY   W  +VE +D+   + A +  N+FT       + +  R  L+  G YH+ + V +F
Sbjct: 1094 DYGPRWPVSVEAIDEKNVIAANDALNIFTFTL----SRNLGRSVLDCTGNYHIADLVTKF 1149

Query: 653  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGG 711
              GSLV           P  +F T +G IGVI ++ +E   + L  LQ N+  +I  VGG
Sbjct: 1150 IRGSLVTIEQSEKADLEPEELFFTSSGCIGVIVNVKNEDVSIHLSGLQRNMSAIIPNVGG 1209

Query: 712  LNHEQW 717
             +H ++
Sbjct: 1210 TSHARY 1215


>gi|302655264|ref|XP_003019424.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
 gi|291183145|gb|EFE38779.1| hypothetical protein TRV_06556 [Trichophyton verrucosum HKI 0517]
          Length = 1027

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 193/667 (28%), Positives = 336/667 (50%), Gaps = 49/667 (7%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ---------GQGQVVTCSGAYKDGSLRIVRNGIGINE 76
            ++++   N+ PI+DF V+D+  +         GQ ++VT SGA+ DGSLR VR+G+GI E
Sbjct: 371  DLVQTISNIAPILDFTVMDMGDRSGATREFSSGQTRIVTGSGAFGDGSLRSVRSGVGIEE 430

Query: 77   QASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE--IEGFCSQ 133
               +  ++ I  +W+LRS+  +PF   L+VSF++ETR+   + + ++EE E    G    
Sbjct: 431  LGVLASMEHITDLWTLRSACPEPFLDTLLVSFVNETRVFHFSADGDVEEKEDGFLGLVFS 490

Query: 134  TQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP-PGYSVNVATANASQVLLATG 192
              TL   +   N+++QVT  + R +   S  +   W+S    +++  A+AN   ++L  G
Sbjct: 491  QSTLLATNIPGNRIIQVTESTSRAIDVDSGMII--WRSSYEEFTITSASANDDYLVLVLG 548

Query: 193  GGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP 252
            G  LV + +    L   +  + + ++S + I       S +Q   V +     + I  LP
Sbjct: 549  GIRLVCMSLSTFELVGSRDFEADNQVSGMTIPA-----SPTQACIVCLPQSAEIIILDLP 603

Query: 253  DLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTGELTDRKK 308
            +L +  K+ LG  GE IPRSV++          L  ++ DG + +F  ++    L +  K
Sbjct: 604  ELEVKNKQALGEPGEAIPRSVIVAEILPNKPPTLFVSMADGTVFSFSFDVHAFSLFNSSK 663

Query: 309  VSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
            ++LG++  + +     N  + VFA  D P++I++S  +++YS V+    S +C  N+ A+
Sbjct: 664  ITLGSEQPSFKELPRGNGQYNVFATCDHPSLIHASEGRIVYSAVDSASASRICSLNTQAY 723

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAE 425
            P S+A++ + EL I  +D+ +   I ++P+    RR+ +    + F + ++K +  +  E
Sbjct: 724  PGSIALSSQHELKIAIVDEERTTQIHTLPMHASVRRLAYSPMEKAFGLGTVKRKISNGVE 783

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFE-----------YGCSILSCSFSDDSNVYYCVGT 474
            E    FV L D+  F  +STY L   E           YG   +  S S D    + VGT
Sbjct: 784  EVSSSFV-LADEMLFRPLSTYDLRPDELVECVIRSQLNYGKDEVGNSISKD---LFFVGT 839

Query: 475  AYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLY 532
            A++    ++  +GRIL+F V   + L LI EK   GA  +L   +  LL A + + + ++
Sbjct: 840  AFLDDVGDDHIRGRILIFEVNRSRELSLIVEKSLMGACRTLAVMDHTLLVAGLVKSVSVF 899

Query: 533  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH-----EEGAI 587
            K      G   L+    +      + +   GD + V D+MKS+SL+ Y       +E   
Sbjct: 900  KLARDRFGNILLEKHTAYRTSTAPIDISVVGDTVAVADVMKSMSLVQYTQPEEGEQEPKF 959

Query: 588  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGE 647
            EE AR Y   W +AV  +++++YL A+   NL  +++N  G T+ +R RL+   E  LGE
Sbjct: 960  EEVARHYQTLWSTAVAPIEENVYLLADAEGNLVVLQQNITGVTESDRKRLQPTSEIRLGE 1019

Query: 648  FVNRFRH 654
             +    H
Sbjct: 1020 MLFLHEH 1026


>gi|426195893|gb|EKV45822.1| hypothetical protein AGABI2DRAFT_72896 [Agaricus bisporus var.
            bisporus H97]
          Length = 1229

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 219/786 (27%), Positives = 355/786 (45%), Gaps = 111/786 (14%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + +GSY+ VLER+ N+ PI+D C+VD +  GQ Q+VTCSG    GS+  VRNG    E  
Sbjct: 447  ETRGSYLNVLERFKNIAPILDACLVDPD-SGQRQIVTCSGGKNTGSINAVRNGADFEEIV 505

Query: 79   SVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE-DELEETEIE-------- 128
            ++  +  +  +W+++S  ++  D+FL++SF + + ++ +N   D +     +        
Sbjct: 506  NIPGVPHVLKIWAVKSRLEEAEDSFLLLSFCNSSSLIKINDSGDNISFAPFDNAIASGLV 565

Query: 129  ------GFCSQTQTLFCHDA----IYNQLVQVTSGSVRLVSSTSRELR-----NEWKSPP 173
                   F +  Q +   D     + + LV   +GS   +    + L+     +EW +  
Sbjct: 566  TVEPTIAFANVAQRVKGQDGKARYMNSSLVVQVTGSGAFLLELDQGLQTYIRIDEWNAKK 625

Query: 174  GYS------VNVATANASQVLLATGGGHLVYLEIGDG-----ILTEVKHAQLEYEISCLD 222
              +      +  A+ N+SQV LA  GG L  L + +      +++ +     + EIS + 
Sbjct: 626  NVADGITPEIVAASINSSQVALAISGGKLALLSVAEDKKLRVVVSTLNDCNRQPEISAIS 685

Query: 223  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT----------------------KE 260
             +P+    ++SQ   V  W    + +F+  D    +                      + 
Sbjct: 686  CSPLNPARAFSQHIVVSYWESNIIEVFTPSDSGFRSVCKSSPLPSLVSSLRFYNFGSDQS 745

Query: 261  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
              G +  P            YLL  L DG +  F    +  EL +RK VSLG  P++L  
Sbjct: 746  SKGADYHP------------YLLAGLSDGSVATF--RWQDQELKERKIVSLGHAPVSLAV 791

Query: 321  FSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
             S   +   V AA DR  V      +L+YS + L+ ++   P N+++ P SL  A    L
Sbjct: 792  CSILGDAKTVLAAGDRAVVFAYERGRLVYSPILLRNIAAASPLNTSSLPMSLVAATAEGL 851

Query: 380  TIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC---AEESEMHFVRLL 435
             IG I D+ KLHIRSIP G ++PR+I HQ     F +  +  +     A E    F  LL
Sbjct: 852  HIGKIKDLNKLHIRSIPFGLDNPRKITHQPLLNAFGVAFVYTEPAEIGAHEVRKSFFSLL 911

Query: 436  DDQTFEFISTYPLDTFEYGCSILSCSFSDDS--NVYYCVGTAYVLPEENEPTKGRILVFI 493
            DD +FE ++ +  D  E   SI+  S   D     ++ +GT    PEE EP KGRIL+  
Sbjct: 912  DDASFEVLAKFDCDADEEIVSIIPFSAVVDGILTPFFVLGTFIFRPEEFEPDKGRILLIS 971

Query: 494  V----------EDGKLQLIAEKETKGAVYSLNAF-----NGKLLAAINQKIQLYKWMLRD 538
            +          +  +L L A  E +G VY+L          +++AA+N  + L+     D
Sbjct: 972  ISTTNNPRNPRQGYQLSLAASIEVRGCVYALTPIVDDKPVARIVAAVNSSVNLFSL---D 1028

Query: 539  DGTR------ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
              T+       L+     + + L   +   G  + VGD + S+SLL  K  E   +  AR
Sbjct: 1029 IDTKIYPAGLHLRKMAEWNHNYLVTGLGAVGSHVFVGDQISSVSLL--KCTEEKFQTVAR 1086

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
            DY   W  +VE +D+   + A +  N+FT       + +  R  L+  G YH+ + V +F
Sbjct: 1087 DYGPRWPVSVEAIDEKNVIAANDALNIFTFTL----SRNLGRSVLDCTGNYHIADLVTKF 1142

Query: 653  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGG 711
              GSLV           P  +F T +G IGVI ++ +E   + L  LQ N+  +I  VGG
Sbjct: 1143 IRGSLVTIEQSEKADLEPEELFFTSSGCIGVIVNVKNEDVSIHLSGLQRNMSAIIPNVGG 1202

Query: 712  LNHEQW 717
             +H ++
Sbjct: 1203 TSHARY 1208


>gi|402582698|gb|EJW76643.1| CPSF A subunit region family protein [Wuchereria bancrofti]
          Length = 418

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 206/352 (58%), Gaps = 46/352 (13%)

Query: 208 EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 267
           E+K A   Y I  +D    G+    S+I AVG WTD+SV + +LP L  + +E + G+++
Sbjct: 56  EIKGAA--YSIQSMD----GKGTLRSEICAVGYWTDLSVALRALPQLVEVVREKIAGDML 109

Query: 268 PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 327
            RS++L   EG  YLL ALGDG +  F ++MKTG L D KK +LGTQPI LR F S+ + 
Sbjct: 110 SRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTGALLDPKKATLGTQPIHLRKFRSRCSP 169

Query: 328 --HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID 385
             ++F  SDRP VIYSSN+KLL+SNVNL+ VS M P  + A+PD+L +     L IG ID
Sbjct: 170 VHNIFVCSDRPAVIYSSNQKLLFSNVNLRMVSTMTPLYAEAYPDALVLTDGHSLVIGRID 229

Query: 386 DIQKLHIRSIPLGEHPRRICHQEQSRTFAI------------------CSLKN------- 420
           DIQKLHIR++PLGE P RI +Q ++ T A+                  C+ KN       
Sbjct: 230 DIQKLHIRTVPLGESPSRIAYQPETNTIAVIVERLEFVDAMGKHHFGQCASKNAMETSSS 289

Query: 421 -----------QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 469
                      +  AEE E+  V LLD  TFE + ++ L+  E   S+ SC   +DS  Y
Sbjct: 290 RLSSMRREPTPECLAEEMEVSSVLLLDSNTFEILHSHELEGSEMAMSLTSCQLGNDSQPY 349

Query: 470 YCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNG 519
           + VGTA ++ +E E   GRI++F   +G  +++L+ EKE KGA YS+ + +G
Sbjct: 350 FVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAAYSIQSMDG 401



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 456 SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYS 513
           S+ SC   +DS  Y+ VGTA ++ +E E   GRI++F   +G  +++L+ EKE KGA YS
Sbjct: 4   SLTSCQLGNDSQPYFVVGTAVIMSDETESKMGRIMMFQASEGPERMRLVYEKEIKGAAYS 63

Query: 514 LNAFNGK 520
           + + +GK
Sbjct: 64  IQSMDGK 70


>gi|443894313|dbj|GAC71661.1| hypothetical protein PANT_5d00006 [Pseudozyma antarctica T-34]
          Length = 1625

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 228/856 (26%), Positives = 384/856 (44%), Gaps = 143/856 (16%)

Query: 25   VEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ 77
            +  +E + NLGPIVDF V D            Q ++VTCSGA   GS+R VR G  + E 
Sbjct: 756  LHTIESWQNLGPIVDFVVDDGAGGDPSASSGAQARIVTCSGAGPSGSIREVRTGASVQEV 815

Query: 78   ASVELQGIKGMWSLRS-STDDPFDTFLVVSFISETRILAMNLEDELEET--EIEGFCSQT 134
             ++ +   + +W + +  T     + ++V F + T  L  +++  L +    +   C  T
Sbjct: 816  CTLPIPNAQHIWPVHAGPTGSKQTSGILVGFATSTAYLYFDVDGNLVDATDRLAAVCRST 875

Query: 135  --QTLFCHDAIYNQ----LVQV--TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANA-S 185
               TL     +       L++V  T  S+      S  L ++W  P G  +  A+AN   
Sbjct: 876  ANPTLAASSLVDESGSALLLRVAHTDFSLFRCQGGSIALLHQWSPPSGCEITTASANDLG 935

Query: 186  QVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            Q ++A     LVYL      LTE     LE+E+SCLDI+ +      +QIAA+G W   +
Sbjct: 936  QCVIALSDKSLVYLTAEAESLTERGKTSLEHEVSCLDISCLSPG-EPAQIAAIGFWQART 994

Query: 246  VRIFSLPDLNLITKEHLGGE---IIPRSVLLCAF------EGIS---------------Y 281
            ++I SLPDL+ + +  +  +    +PRS+LL  F      +G S               +
Sbjct: 995  IQILSLPDLSPVGQSSVVQQQLPAVPRSLLLHRFASKQTRQGASRQSRTSLRNRDALSPH 1054

Query: 282  LLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLRTFSSKNTTHVFAAS- 333
            LL  LGDG L+ + +++ T E       L D K +SLGTQ + L    + +   V A S 
Sbjct: 1055 LLIGLGDGTLITYSVSLPTDESFSRTVGLFDCKTLSLGTQALKLDAIETSSGARVVAVSG 1114

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCP----------FNSAAFPDSLAIAKEGELTIGT 383
             RPT++++ +K+  Y+   L+     C            N+ +  DS+ +A  G L    
Sbjct: 1115 SRPTLVFADSKRFSYNA--LQHGDQRCVATLYVGAEQVLNAFSLGDSVKLASVGTL---- 1168

Query: 384  IDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSL----KNQSCAEESEMHFVRLLDDQ 438
                Q+  +R+ PLG + P  I      + FA+C+     +  +   +     VR+LD  
Sbjct: 1169 ----QQRDVRTFPLGLDQPLAIAQWPARQAFAVCTWAFLPRGSASGGDKPRGAVRILDQT 1224

Query: 439  TFEFISTYPLDTFEY-GCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV--- 494
            TFE +    L+  E   C  +  ++  +      +GT Y+  +  E   GR++ F V   
Sbjct: 1225 TFEVLDEIRLEPDERPNCIAVLHAYGTE---MLVIGTGYIDSQSQETVSGRLVGFDVSPG 1281

Query: 495  ------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRELQSE 547
                  E G+L+ + E +  G VYS+ +   +L AA+N ++++Y  +  R       + +
Sbjct: 1282 SSRTKEERGRLRRLFEHDENGNVYSVQSIGNRLAAAVNSEVKIYSVIDPRRGDASSPKIK 1341

Query: 548  CGHHGHILALYVQ-----TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
                G   + ++         D IVVGD ++S+++L    +   + E ARD +  W SA 
Sbjct: 1342 IKQRGSWASSFIACSLSVVEPDRIVVGDALRSMNVLHVHPQTARVSEIARDCDPFWTSAT 1401

Query: 603  EILDD--DIYLGAENNFNLFTVRK--------------------NSEGATDEERGR---- 636
            E+LDD    Y+GA+ +FNL+T ++                     +  A+D + G     
Sbjct: 1402 ELLDDASQTYIGADISFNLYTTQRVLLSDEVKTRMRRAREREQERTVSASDSQGGGRDDG 1461

Query: 637  ------LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
                  ++    +H G+ +++F   SLV     ++    P +IF T  G IGVIA +  E
Sbjct: 1462 DQYAHVMQRSAVWHYGDMISKFCRKSLVPSA-GANAAIQPKLIFCTAAGAIGVIAHVRDE 1520

Query: 691  QYLFLEKLQTNLRKVIKG------------VGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
            +   L K++ N   +I+             VGG+ HE+WR+   + +      FLD  ++
Sbjct: 1521 EAQLLAKVERNTLSLIESGGGESNAASAGVVGGIRHEEWRTLRTDHRVQSPAGFLDAGVL 1580

Query: 739  ESFLD--LSRTRMDEI 752
            + F+D  L R + D I
Sbjct: 1581 KMFIDGRLDRAQRDRI 1596


>gi|167390599|ref|XP_001739420.1| DNA damage-binding protein [Entamoeba dispar SAW760]
 gi|165896898|gb|EDR24200.1| DNA damage-binding protein, putative [Entamoeba dispar SAW760]
          Length = 1088

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 210/780 (26%), Positives = 383/780 (49%), Gaps = 60/780 (7%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 85
            E+LE + N GPI+D   +  E   +  ++ C   Y+ G+L+++ +G+GI+     E++GI
Sbjct: 335  EILETFENRGPILDMTAIHDEITNKDDLLMCCNTYQQGTLKLISSGVGIDIICQNEMKGI 394

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED---ELEETEIEGFCSQTQTLFCHDA 142
              ++ +     +    +L++S+   +++     E+   +  E EI+GF  + +T+ C   
Sbjct: 395  THLYQVEMGNKE----YLIISYSDNSKVFESQQENNQLQFNEIEIKGFNRKEETI-CSGI 449

Query: 143  IYNQ------LVQVTSGSVRLVSSTSRELRNEWKSPPGYS--------VNVATANASQVL 188
            I          VQVT   V +  S   +L  + +     S        + ++ +N   VL
Sbjct: 450  IEIGEMKEICFVQVTREEVNIFDSEQLKLIQQIRVNKFISHSCIYDEKLYISQSNEINVL 509

Query: 189  LATGGGHLVYLEIGDGILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
                               E+KH    E +IS   I   G       +  +  W    + 
Sbjct: 510  NEK---------------KEIKHIYSGENDISAFTIGKEGT----EDVIGICYWDSNKME 550

Query: 248  IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNF----LLNMKTGEL 303
            I  L + N      + G I  +S+ +   +   Y++  +GDG +L +    L+ ++ GE+
Sbjct: 551  IIKLENGNKNHIREINGNIYGKSIEIINNKEGMYIVIGMGDGRVLVYQMEELMEIE-GEI 609

Query: 304  TDRKKV-SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            T   KV  +G   I L+T       ++    DRPT++     K+   +VN  E+  + PF
Sbjct: 610  TKNYKVLDIGLSGIELKTLEINGMKYIMCLCDRPTLVSIYKGKIKTLSVNCSEIVSIVPF 669

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQS 422
                  +SL +A +  + IG I++IQ +H +S+ +G    RI   +Q     + S + + 
Sbjct: 670  KMKECMNSLIVATKENIIIGNIEEIQSIHTKSLSIGVFISRIVISKQENKALLLSSEIKE 729

Query: 423  CAEES-EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 481
              E+  E H ++L+D +  E   ++ L   E+  SI       D    + +GTA+  P E
Sbjct: 730  LKEKRIESHSIKLIDFRKMEIEDSHELKENEHALSIEEIVV--DEKEMFVIGTAFAKPNE 787

Query: 482  NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM-LRDD 539
             EP+ GRIL+  ++DGKL+++ EK+  GAVYS+     K LA +I +K+ ++++  +  +
Sbjct: 788  VEPSSGRILIVQIKDGKLEIVFEKDVNGAVYSIKTLLKKYLAMSIEKKLVIFEYQRIITN 847

Query: 540  GTRE--LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY---KHEEGAIEERARDY 594
            G  E  LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + +  + E +RD+
Sbjct: 848  GEFEVKLQEKGSCNVKLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDF 907

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH 654
             A++ +A+E +D++ YL +++N NL     NS G  + ER RL      H+GE +N    
Sbjct: 908  YASYTTAIEFVDENCYLSSDSNSNLLVFNTNSTG-NESERFRLNNCAHIHVGECINVMCK 966

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLN 713
            GS+       +  Q   ++FG V G IG I  +P+E Y  L K+Q  +   +KG V    
Sbjct: 967  GSIAPTHSTYETIQKKCILFGGVTGYIGGICEIPNEIYDILIKVQNQILLQMKGIVECTT 1026

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             ++W+   ++ K + + N +DG+++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 1027 PDEWKKVIDDWKRMPSSNIIDGNIVESYLEMSKEKQCEIAHLSGVNEEQINDIIENMISL 1086


>gi|388853409|emb|CCF53029.1| related to UV-damaged DNA-binding protein [Ustilago hordei]
          Length = 1508

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 236/864 (27%), Positives = 382/864 (44%), Gaps = 131/864 (15%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGI 74
            G  +  +E + NLGP+VDF V D            Q ++VTCSGA   GS+R VR+G  +
Sbjct: 636  GGSLVTIETWQNLGPVVDFTVDDGAGGDPTTSASAQARIVTCSGAGPSGSIREVRSGASV 695

Query: 75   NEQASVELQGIKGMWSLRSSTDDPFDTF-LVVSFISETRILAM----NLEDELEETEIEG 129
             + +S+ +   + +WS+ +       T  L++ F + T  L      NL D  +     G
Sbjct: 696  QDVSSLPIPNAQQIWSVEAGDATSKQTAGLLIGFATSTAYLHFDANGNLADATDRLSAVG 755

Query: 130  FCSQTQTLFCH---DAIYNQ-LVQVTSGSVRLVS--STSRELRNEWKSPPGYSVNVATAN 183
              +   TL      DA     LV+V   +  LV+    +  L  +WK   G  +  A+ N
Sbjct: 756  VDTTLPTLTASTVFDASQGPLLVRVAKDAASLVNLQDEAATLVQQWKPSAGLEITTASVN 815

Query: 184  A-SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWT 242
               Q+++A+    L YL + +G L E    QL++E+SCLD + +      +Q AA G W 
Sbjct: 816  PYGQLVIASSDKSLSYLVVEEGALIERNKIQLDHEVSCLDTSSVTAG-QAAQFAACGFWQ 874

Query: 243  DISVRIFSLPDLNLITKE---HLGGEIIPRSVLLCAFEG-------------------IS 280
              S++IF+LP+L  + +      G   +PRS+LL  F                     + 
Sbjct: 875  TRSIQIFALPELAPVGESLVVQQGFAAVPRSILLHRFASKQSEASSQTKSSVGNRDALMP 934

Query: 281  YLLCALGDGHLLNFLLNMKTGE-------LTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
            +LL  LGDG L++F L++   +       L+D K VSLG Q + L    S     V A S
Sbjct: 935  HLLIGLGDGTLVSFSLSLPRDDSYSKIVGLSDCKTVSLGKQALKLDAIESWAGARVVAVS 994

Query: 334  -DRPTVIYSSNKKLLYSNVNLKE-----VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 387
              RPT++Y+ +K+  Y+ +  K      + H+ P        + A+A+  EL   +I  +
Sbjct: 995  GSRPTLVYADSKRFSYNALKHKSQRSVTMLHVGPGRVLG---AFALAESVEL--ASIGAL 1049

Query: 388  QKLHIRSIPLG-EHPRRICHQEQSRTFAICS---LKNQSCAEESEMH-FVRLLDDQTFEF 442
            ++  IR+ PLG + P  I      + FA+C+   L   S  + S+    +R+LD  TFE 
Sbjct: 1050 RQRDIRTFPLGLDQPLAIAQWPNRKVFAVCTWAFLPRGSATKASKSRGAIRILDQSTFET 1109

Query: 443  ISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV-------- 494
            +  + L+  E    I         +    VGT Y+   E+E   GR+L F V        
Sbjct: 1110 LDEFRLEVDERPNCI--TVLRAQGHEMLVVGTGYISDGEHEVISGRLLGFDVSAGSIRGK 1167

Query: 495  -EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM--LRDDGTRELQSECGHH 551
             E G+L+ +  KE  G VYS+ + N +L  A+N ++++Y  +     D     +      
Sbjct: 1168 EERGRLRKLFVKEQAGNVYSVQSINNRLATAVNSEVKIYSVVDPRASDEVSAPRINVVQR 1227

Query: 552  GHILALYVQ-----TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            G     ++         D IVVGD ++SI++L        + E ARD +  W SA E+LD
Sbjct: 1228 GSWACSFIACNLSVVEPDQIVVGDALRSINVLHVHPYTARLTEIARDCDPFWTSATELLD 1287

Query: 607  D--DIYLGAENNFNLFTVRK-------NSEGATDEERGRLEVVGE--------------- 642
            +    Y+GA+ +FNL+T ++        +      ER     VGE               
Sbjct: 1288 EASQTYIGADISFNLYTTQRVPLSEQVKARIRRTREREIERSVGEVNRLTTRDPNQVDRY 1347

Query: 643  ---------YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 693
                     +H G+ +N+F   SLV   P +     P ++F T  G IGVIA +  EQ  
Sbjct: 1348 AHVMQRNAVWHYGDMINKFYRKSLVAD-PGTAAEVHPRLLFCTAAGAIGVIAHVQEEQAR 1406

Query: 694  FLEKLQTN------------LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 741
             L K++ N                   V  ++H+ WR+   + +      FLD ++++ F
Sbjct: 1407 LLAKVERNILSLIELSSSISTSNSSSVVTSISHQDWRTLRTDHRVQAPAGFLDANILQMF 1466

Query: 742  LD--LSRTRMDEISKTMNVSVEEL 763
            +D  L   + D++ +  N  +E L
Sbjct: 1467 VDGRLDSKQRDKVVQGPNSEMEAL 1490


>gi|299743623|ref|XP_001835883.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
 gi|298405741|gb|EAU85948.2| hypothetical protein CC1G_02971 [Coprinopsis cinerea okayama7#130]
          Length = 1282

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 246/855 (28%), Positives = 394/855 (46%), Gaps = 122/855 (14%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            +GS++ VL  + N+ PI D  VVD+E  GQ ++VTCSG Y  GSL IVR+G   +E A++
Sbjct: 449  EGSHLHVLHSFKNIAPINDAVVVDVEGNGQNEIVTCSGGYTSGSLNIVRSGAEYHEAATL 508

Query: 81   E-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE--------LEETEIEGFC 131
              +  +  +W+++S+ +D   + +V S  +  R L   ++D+        L+ T    F 
Sbjct: 509  PGVCNVNSLWTIKSNFEDTIHSHIVAS--THDRTLLFRIKDDGRNTTFTLLDSTAARDFI 566

Query: 132  SQTQTLFCHD----------AIY---NQLVQVTSGSVRL----VSSTSRELRNEWKSPPG 174
            +   T+   +          ++Y   N +VQVT   V L    V       R  W  P  
Sbjct: 567  TDQPTVALANVRKRVSVERKSVYRDCNWVVQVTDNVVNLLEHDVVLGGFNKRASWSPPSS 626

Query: 175  YS-----VNVATANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIG 227
             +     +  A  N +QV+LA  GG LV L   + G   E V       EIS +      
Sbjct: 627  VAPRPVEIVAADINPTQVVLALSGGRLVVLRHNEEGTAFELVAEKNTLREISAVSCQAAD 686

Query: 228  ENPSYSQIAAVGMW---------TDISVRIFSL----------PDLNL---ITKEHLGGE 265
                Y+++  VG W          D  V I  L          P L     ++K+++   
Sbjct: 687  TKTPYTKVFLVGYWEQVAEADTDRDTVVEILELERRSNPGSGTPSLTCLVKVSKKYVPA- 745

Query: 266  IIPRSVLLCAFEGI--------------SYLLCALGDGHLLNFLLNMKTG-ELTDRKKVS 310
             +PRS+LL +F G+              ++L C L DG + +F++    G  +TD K V 
Sbjct: 746  -LPRSLLLYSF-GVPDSEPTNLKPNSQPTHLFCGLADGSVAHFVVWKDGGLNVTDSKIVP 803

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            LGT P+            V A  +R ++     K++ +S V LK+++   P N+  FP S
Sbjct: 804  LGTTPVKFSACVVDGKRCVLAVGNRASIFSYERKRMAHSPVMLKDLNAAYPLNTHTFPTS 863

Query: 371  LAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAI-CSLKNQSCAEESE 428
              +A    LTIG++ +I K+ IR+IPLG ++P+RI H    R +A+ C+        ++E
Sbjct: 864  FILANHQGLTIGSVKEIGKISIRTIPLGYDNPQRIVHIPLLRAYAVACATYTPVRVGDAE 923

Query: 429  MH--FVRLLDDQTFEFISTYPLDTFEYGCSILSCS--FSDDSNVYYCVGTAYVLPEENEP 484
                 ++LLDD TF+ +S Y  D+ E   ++ + +   S        VGT+         
Sbjct: 924  AFKGSLKLLDDLTFKQLSQYNCDSDEVISALTTFTEEISGKETPLLVVGTS-------SS 976

Query: 485  TKGRILVFIVEDG----KLQLIAEKETKGA-VYSLNAFNGKLLAAINQKIQLYKW----M 535
            ++ R+LVF V       +L LI   E  G  V SL      +LAA++  +  YK+     
Sbjct: 977  SQARLLVFSVASSEACQELTLITSLEVNGQHVNSLCVMGNYVLAAVDCAVFSYKFKGSSD 1036

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDF---IVVGDLMKSISLLIYKHEEGAIEERAR 592
              D  + EL+ E G   H     V++ G F   +V+GD+  S+SL+     +G     AR
Sbjct: 1037 DTDSQSSELK-EVGEWNH--NYIVRSLGSFNNSLVIGDIASSVSLV--NVNKGQFTPIAR 1091

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
            DY   +  A+E L ++  +G  +  NLFT    S G     R  LE  G + LG+   +F
Sbjct: 1092 DYAPLFPYALEALSENALIGGNDASNLFTF---SLGQGGMGRKVLERDGSFFLGDLATKF 1148

Query: 653  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGG 711
              GS+       +  + P  IF T +G IG +  +  +Q  L L  LQ NL  +++GVG 
Sbjct: 1149 IRGSITTDYTAIEALE-PIAIFFTGSGRIGAVIDIKDQQLALHLSGLQRNLSALVQGVGA 1207

Query: 712  LNHEQWRSFNNEKKTVDAK----NFLDGDLIESFLDL--SRTRMDEI------SKTMNVS 759
              H ++R+  N +   DA+     F+DGD +E+FL +   +  +D++       + +  S
Sbjct: 1208 STHTKFRAPRNNRGRTDAEAAGFGFIDGDFVETFLGMLGDKGMVDKVMTGQSAPEKLEFS 1267

Query: 760  VEELCKRVEELTRLH 774
            V+E  K +E L  LH
Sbjct: 1268 VDEYQKTLETLQGLH 1282


>gi|409049568|gb|EKM59045.1| hypothetical protein PHACADRAFT_181065 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1268

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 233/793 (29%), Positives = 360/793 (45%), Gaps = 89/793 (11%)

Query: 19   DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
            + KG ++E L +Y N+ PIVD  + D +  GQ Q++TCSG    GSL +VR G    E A
Sbjct: 458  NCKGRFIEELTQYANIAPIVDAVMADPDESGQPQIITCSGGANTGSLNVVRTGADFQELA 517

Query: 79   SV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTL 137
             + E+  +  +W +R+S D P DT+++ + + E+ +L  +  D +  T I+   ++  T 
Sbjct: 518  VLNEIPNVTNIWPIRTSFDGPADTYVLATTLYESFVLRFDDGDSV--TRIDPSATELVTN 575

Query: 138  FCHDAIYN-----------------QLVQVTSGSVRLVS---------------STSREL 165
                A+ N                  +VQVT   + LV                S  ++ 
Sbjct: 576  RPTIAVANIPRRTTQQNASTYINSSLVVQVTPQGLNLVEYDVALGAFNKVGDGWSLQKQE 635

Query: 166  RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLE-YEISCLDI 223
               W++     +  A+ N SQ  +A  GG  +   +  DG L  ++  +    EI+ L  
Sbjct: 636  NPLWRA---KEIVAASINPSQFAVALNGGTFLLFNLSPDGQLNLLQTREFHGKEIAALSC 692

Query: 224  NPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP---RSVLLCAF-EGI 279
             P+  + ++S   AV  W   +V + S  D  L T  H     +P    S+LL  F  G 
Sbjct: 693  APLDPSKNFSPFVAVSFWGSNTVTLLSTKDPALGT--HTESAPLPALAHSLLLHNFGAGR 750

Query: 280  S--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFA 331
            S        Y++  L DG +    ++ +  EL D+K  +LG  P++L   +      V A
Sbjct: 751  STRDADFQPYVVAGLVDGTVA--CVSFRNNELRDQKLFALGAAPVSLAVSTVDGARMVLA 808

Query: 332  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 391
               R  V Y   ++L  S V LK V+     N+AAFP    +A    L +G I  + K+ 
Sbjct: 809  TGSRAAVFYWDRQRLRQSPVMLKNVAVGAGLNTAAFPACQILATPSSLVVGQIRGVDKMQ 868

Query: 392  IRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC----AEESEMHFVRLLDDQTFEFISTY 446
            IRS  LG E PRRI +      F +   K+       AE  E  F  + D  TF  IS +
Sbjct: 869  IRSFGLGHESPRRIAYHSDLNLFGVSIAKSAPARVGEAELQESTF-EIKDSVTFSTISLF 927

Query: 447  PLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDG--KLQL 501
              +  E   ++L  +    +   + VGT      E EP+ GR+++F V    DG  +L+ 
Sbjct: 928  TAEPDEEITAVL--ALPAGAPGCFVVGTVKHQHGEFEPSAGRLILFGVVPSVDGGRELKK 985

Query: 502  IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQT 561
            +AE E  G VY+L A    + AA+N  + LY  M+  +G   L+     + +     +  
Sbjct: 986  LAEAEANGCVYALAAVENGVAAAVNTSVDLYG-MVEHEGAHALEKVAAWNHNYFVTSLVA 1044

Query: 562  RGDFIVVGDLMKSISLL-IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
            RG  ++ GD + S+S+L + +     +   ARDY   W  AVE   D   +GA  + NLF
Sbjct: 1045 RGGRLIAGDAISSVSVLEVLRGSH--LRTIARDYGPVWPVAVEATKDGGVIGANTDGNLF 1102

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-----IFG 675
            T         +  R  LE  G YHLGE VN+F  G+LV        G   ++     +F 
Sbjct: 1103 TF-----ALPEGPRAVLERNGHYHLGELVNKFIPGALVGNNSGGGSGGEGSLFETEQLFV 1157

Query: 676  TVNGVIGVIASLPHEQY-LFLEKLQTNLRKVIKGVGGLN-HEQWRSFNNEKKTVDAKN-- 731
            T +G +G++  +  +   L L  LQ NL  V+    G   H QWR+  N +   DA++  
Sbjct: 1158 TSSGRVGLVHHVCDDGVALALTALQRNLGGVLGDGPGGTAHGQWRAPANARGRSDAEDGA 1217

Query: 732  --FLDGDLIESFL 742
              FLDGDL+ESFL
Sbjct: 1218 TGFLDGDLLESFL 1230


>gi|71016864|ref|XP_758932.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
 gi|46098463|gb|EAK83696.1| hypothetical protein UM02785.1 [Ustilago maydis 521]
          Length = 1549

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 230/883 (26%), Positives = 368/883 (41%), Gaps = 172/883 (19%)

Query: 22   GSYVEVLERYVNLGPIVDFCVVD-------LERQGQGQVVTCSGAYKDGSLRIVRNGIGI 74
            GS V  LE + NLGP+VDF V D            Q ++VTCSG    GS+R  R+G  +
Sbjct: 638  GSLVN-LETWQNLGPVVDFVVDDGAGGDPTYASSAQARIVTCSGLGPTGSVREARSGASV 696

Query: 75   NEQASVELQGIKGMWSLRSSTDDP--FDTFLVVSFISETRILAMNLEDELEETEIEGFCS 132
             + AS+ +   + +WS+ +  DD       L+V F + T  L  N + +L +   +   +
Sbjct: 697  RDIASLPIPNAEQIWSVDAGVDDASKLTIGLLVGFATSTAYLHFNADGDLTDATDQLVAA 756

Query: 133  ---------QTQTLFCHDAIYNQLVQV--TSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
                        T+  HD    QL++V  T  S+  V   S  + ++W+ P    V  A+
Sbjct: 757  GANVSLPTIAATTVLFHDR-SPQLLRVDRTGASLFSVQDASISILDQWRPPNELEVTSAS 815

Query: 182  ANA-SQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGM 240
             N+  Q +LA     L+YL   DG L E     LE E+SC+DI+P+    + +Q+ A G 
Sbjct: 816  VNSVGQAILALSDKSLLYLTDEDGALIERNKKMLEDEVSCVDISPLIAGKA-AQLVACGF 874

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEI--IPRSVLLCAFEGI------------------- 279
            W       ++LPDL ++ +     E   +PRS+LL  FE                     
Sbjct: 875  WGRDVFDFYNLPDLEVVPR-GFAAEFSSVPRSILLHRFESSQPEKASDAEFEFWGFNPNP 933

Query: 280  --SYLLCALGDGHLLNFLLNMKTGE--------LTDRKKVSLGTQPITLRTFSSKNTTHV 329
              +YLL  LGDG L++F L     +        L D K ++LGTQ + L    +     V
Sbjct: 934  LDAYLLIGLGDGTLVSFRLGGIVADGNAYVPVSLYDAKTITLGTQALKLDAIKTSTGARV 993

Query: 330  FAAS-DRPTVIYSSNKKLLYSNVNLKE---VSHMCPFNSAAFPDSLAIAKEGELTIGTID 385
             A S  RPT++Y  +K+  YS +  K+   V+ +C      F     +     L + +I 
Sbjct: 994  VAISGSRPTLVYHDSKRFSYSALKYKDPRSVATVCAGPGRVF---AVVVLTDSLELTSIS 1050

Query: 386  DIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSL----KNQSCAEESEMHFVRLLDDQTF 440
             + +  IR+ PLG   P  I      + FA+C+     +  +  +E     VR+LD  TF
Sbjct: 1051 ALGQRDIRTFPLGLNQPLAIAQWADRKVFAVCTWTFLPRGSASKQEGSRGAVRILDHTTF 1110

Query: 441  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV------ 494
            E +    L+  E    I         +    VGT YV  + +E  +GR++ F V      
Sbjct: 1111 ELLDEIRLEPDERPNCITLLDLP--GHKMLVVGTGYVSKQSSETVRGRLVAFDVSTGSSR 1168

Query: 495  ---EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-------LRDDGTREL 544
               E G+L+ + E    G VY + +    L AA+N +I+ Y           R  G    
Sbjct: 1169 TKEERGRLRQLFECSENGNVYQVQSTRYHLCAAVNSEIKTYSITNCKDMSDKRPSGGPRR 1228

Query: 545  QSECGHHGHILALYVQT-----RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 599
              E    G     ++         D +VVGD ++S+++L      G + E ARD + +W 
Sbjct: 1229 PYEVRQEGSWACSFIACNLSAIEPDRLVVGDALRSMNVLNVDRYTGRLTEIARDCDPSWT 1288

Query: 600  SAVEILDDD--IYLGAENNFNLFTVRKNSEGATDEERGR--------------------- 636
            SA E+LD +   Y+GA+ +FNL+T ++     ++E R                       
Sbjct: 1289 SATELLDSETQTYIGADISFNLYTTQRMP--MSEEVRTSIRRARERETERSVSLAYPRTL 1346

Query: 637  ----------LEVVGEYHLGEFVNRFRHGSL-VMRL------------------------ 661
                      ++    +H G+ +N+FR     V+RL                        
Sbjct: 1347 RDTDDCYAHVMQRKAVWHYGDMINKFRQSEFWVVRLVPRHPIPSHPILSNLTLTLIFSFA 1406

Query: 662  ------------PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG- 708
                        P  D    P ++F T  G IGVIA +  ++   L K++ N+  +I+  
Sbjct: 1407 RRLISTASLVSDPGPDAAVRPKLVFCTAAGAIGVIAHVRDDEAQILAKVERNILSLIESP 1466

Query: 709  --------VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
                    +G + H  WR+   + +      FLD D+++ FLD
Sbjct: 1467 TEAASAGVIGNIAHSDWRTLRTDHRVQAPAGFLDADVLQMFLD 1509


>gi|390342012|ref|XP_793599.3| PREDICTED: uncharacterized protein LOC588842 [Strongylocentrotus
           purpuratus]
          Length = 1161

 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 125/277 (45%), Positives = 180/277 (64%), Gaps = 33/277 (11%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL++LN + D  GSYV ++E + NLGPIVD  VVDL+RQGQGQ+VTCSGAYK+GSLRI+R
Sbjct: 263 QLVRLNTESDESGSYVTMMETFTNLGPIVDMAVVDLDRQGQGQLVTCSGAYKEGSLRIIR 322

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W L+   +  FD  LV+SF+ +TR+ +              
Sbjct: 323 NGIGIHEHASIDLPGIKGIWPLKVDMNSQFDDTLVLSFVGQTRVKSF------------- 369

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
                            +  +T  SVRLVS+ ++ + +EW+   G +++VA+ N+ QV+ 
Sbjct: 370 -----------------INYITGASVRLVSTPTKRMVSEWRPQSGKNISVASCNSKQVVC 412

Query: 190 ATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIF 249
           A  G  + YLEI +G + +V    +E+E++CLDI P+  +  ++ + AVG+WTDIS RI 
Sbjct: 413 A-AGSDIFYLEIFEGEVRQVSTVTMEHEVACLDITPLTGD--FTDLCAVGLWTDISARIL 469

Query: 250 SLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL 286
            +P +  +  E LGGEIIPRS+LL  FEG +Y+LCAL
Sbjct: 470 KIPTMESMHVELLGGEIIPRSILLMTFEGQNYILCAL 506


>gi|384490729|gb|EIE81951.1| hypothetical protein RO3G_06656 [Rhizopus delemar RA 99-880]
          Length = 967

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 197/731 (26%), Positives = 339/731 (46%), Gaps = 118/731 (16%)

Query: 11  LIKLNLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           LI+L ++   K  Y V+VL  Y  LGPIVDFC+ D  +QG+  +  C+G  KD S+RIV 
Sbjct: 333 LIQL-IKGQEKSKYTVKVLSTYSCLGPIVDFCLYDYNKQGKQTMACCAGVEKDASIRIVE 391

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIG +++ +++   +  MW+L  S D   D+ L+ + + +T +L  + ++ELE T+   
Sbjct: 392 NGIGFSKKYALDFPLVYAMWTL--SLDGDRDSLLISTAL-DTVLLKPSDQEELEVTQHTS 448

Query: 130 FCS--QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR-ELRNEWKSPPGYSVNVATANASQ 186
           + +   +Q     D   + +VQ TS  VR++++    +L  EWK P G S+ +A    S 
Sbjct: 449 YSALDTSQMTLAADMFNSFIVQATSSFVRMMTNDEYGQLIGEWKPPTGTSIAIAKIKDSH 508

Query: 187 VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPS-YSQIAAVGMWTDIS 245
            ++   G  ++YLE+ +    E    QL+   SC+ I+   EN + Y  + A    ++ S
Sbjct: 509 CVVCCEGDMIIYLEMTNKGFIEKSKRQLK-NASCISISTRKENETLYDYVVAGTCGSNPS 567

Query: 246 VRIFSLPDLNLITK-EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGE-- 302
           V    LPDL ++ + + +     P  +L+   E + YL+  LGDG + ++ + + + +  
Sbjct: 568 VVFLQLPDLEVVLEHKDMPSTTGPNDLLVVTMEKVLYLMVLLGDGQMFSYHMEVGSEDVI 627

Query: 303 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
           L    ++ +GT    +  +       VF A  RPTVI S ++ L   +VNL         
Sbjct: 628 LESETEIMVGTYCTAMYPYQHGQEKRVFVAGQRPTVISSFHQTLFVYSVNL--------- 678

Query: 363 NSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQS 422
                  +  +  E  L I  I DI+ L + S      P +   +   +           
Sbjct: 679 -------TYELPGEMPLRIEYISDIKALAVASCTNVHDPNKNIIERTGK----------- 720

Query: 423 CAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN 482
                    VRLLD QTF+                                         
Sbjct: 721 ---------VRLLDAQTFQ----------------------------------------- 730

Query: 483 EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ-LYKWMLRDDGT 541
                    F +E+ + +LI   +  G VY + +    ++AA++ KI  LY +       
Sbjct: 731 --------AFTIENSRCELIDAVDMPGVVYRMESIKNTIIAAVDGKIYGLYNFKPDLLKG 782

Query: 542 RELQSECGHHGHILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIE--ERARDYNANW 598
             ++ +   H +++AL + T   D ++VGDLM+S+SLL  + +E +++    A D    W
Sbjct: 783 ERIEFKFLLHNNVVALDMDTDNNDTLLVGDLMESMSLLKVEKDEESLKLSLEAVDNKQVW 842

Query: 599 MSAVEILDDDIYLGAENNFNLFTVRK---NSEGATDEERGRLEVVGEYHLGEFVNRFRHG 655
           M+AV+ +++++ +GA++  NLFT+ K     EG T     +LE+ G YHLG  VNRFR  
Sbjct: 843 MTAVKFVNENVLIGADDRHNLFTMIKPEIRQEGKT----CKLELEGGYHLGTLVNRFRKD 898

Query: 656 SLVMRLPDSDVGQIPTV-------IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 708
             ++R  ++    I ++        F TVNG IG + ++  E + F + +Q  +  ++  
Sbjct: 899 --ILRDVENASDNIDSISKYESEFTFATVNGSIGTVKTISRESFEFFKGIQEGILNILPN 956

Query: 709 VGGLNHEQWRS 719
            G L+H  W S
Sbjct: 957 NGNLDHGLWLS 967


>gi|213407660|ref|XP_002174601.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
 gi|212002648|gb|EEB08308.1| damaged DNA binding protein Ddb1 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1078

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 201/783 (25%), Positives = 369/783 (47%), Gaps = 57/783 (7%)

Query: 10   QLIKLNLQPDAKGSYVEVLE--RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            +L +   +P   GS VE+LE   + NL PI DFC+      G   +V C  AY +GSLR 
Sbjct: 335  KLYRFQNKPGVAGS-VELLEVQSFDNLAPISDFCID--HGNGGSFMVACCNAYNEGSLRE 391

Query: 68   VRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
            +++GI I++   +E+  +  ++S++  +      +L V  ISET +  ++   E++   +
Sbjct: 392  MKSGIDISDYGVIEMPNVCSLYSVQLQSS--VTKYLFVGSISETSVFEISQSGEMDL--V 447

Query: 128  EGFCSQTQTLFC-HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
            +  C +  T+F    +  + L  V   SV L     ++L + W +  G ++  A    + 
Sbjct: 448  DSLCLEEPTIFVGATSDSSCLYHVARSSVCLFDG--KQL-SYWFADGG-AITCAAVYDNA 503

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            V L+     +V+L      L  V   Q++ +++ L         + ++   VG+W    +
Sbjct: 504  VCLSMTNNQIVFLHK----LQVVSKLQVDSDVTALSF------LNDARTICVGLWNQ-KL 552

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELT 304
             +    +     +E L      +S++     GI+   L  +   G L+ F ++  T  + 
Sbjct: 553  LLLDSDNTTCTVRETLEVNEKAQSLVCVKLAGIASVALYMSTESGKLITFDIDPVTKGIK 612

Query: 305  DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 364
             R    L   P+ + TF + N   +    + P  +Y  N+ L ++ +   ++  +     
Sbjct: 613  QRLTYPLTAVPLNMNTFQTPNGPVLITLGEHPYAVYGENQHLSFAYIGNSDIVCLSHLQH 672

Query: 365  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 424
               P +   A    L +  ++ +QKLHIR IP+   PRRI   ++        L+++  +
Sbjct: 673  PGIPANTVYATRNALKLSNVNMLQKLHIRRIPVAGIPRRIAATKEHYFVLSVDLQDKLAS 732

Query: 425  EESE-MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 483
            + S  M  + +    T+E +  +  + +E    I+ C+ +   N    VGT +  P+ +E
Sbjct: 733  QGSSIMSSLHVFKKLTYETVLQHEFEDYE----IVECALTLPDNERVVVGTGFNYPDRDE 788

Query: 484  PTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW---MLRDD 539
            P  GR++VF + E  KL   A  +T+GA++S+    GKLL  +N  +  +++    LR  
Sbjct: 789  PDGGRLIVFRLDEQEKLVTEAVYKTQGAIFSVEYQEGKLLVGMNAVLCTFRYENKTLRVV 848

Query: 540  GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 599
            G+    + C      L +   ++ D +VVGD+MKS++L  Y  E+   EE ARD+ A W+
Sbjct: 849  GSTRTPTYC------LNIAASSK-DIVVVGDMMKSLTL--YNTEKDTAEEVARDFGALWV 899

Query: 600  SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
            ++V+ L + ++     +    T+  +++     ER +L     Y LG+ VNR R G  V+
Sbjct: 900  TSVQPLSETLFFCTTADGEAVTMLWDTKAPQSVERKKLRWKSCYRLGDMVNRTRRGCFVL 959

Query: 660  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW-- 717
              P   V   P ++  TV G I +I        L L+ +Q N  + +  +GGL+  +W  
Sbjct: 960  SSPSRLVK--PELMCVTVEGGILLIGDASQHADLLLQ-IQHNFLEAVPPLGGLDFYKWHE 1016

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELT 771
            R F   + +   K+F+DGDL+ES  DL  + + +I       +++N+SV +L   + +L 
Sbjct: 1017 RLF-PARASAANKDFIDGDLLESIEDLPESTLQKIVQGTNGGQSLNISVPDLLGIISDLK 1075

Query: 772  RLH 774
            RLH
Sbjct: 1076 RLH 1078


>gi|302423344|ref|XP_003009502.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
 gi|261352648|gb|EEY15076.1| DNA damage-binding protein 1b [Verticillium albo-atrum VaMs.102]
          Length = 1119

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 197/792 (24%), Positives = 356/792 (44%), Gaps = 80/792 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSGAYKDGSLRIVRNGIG 73
            + +++   N+ PI+DF ++DL              GQ ++V   G + +GSLR +R+ +G
Sbjct: 366  IRLIQTIPNIAPILDFSIMDLGNAGDSGVGNAFSSGQARIVAGCGVHHNGSLRSIRSSVG 425

Query: 74   INEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFC 131
            + +   ++ +Q ++G++SL+S   +  DT LVVSFI+ETR+   +    +EE  + +G  
Sbjct: 426  LEDIGILDGIQDVRGLFSLKSYGSEKVDT-LVVSFITETRVFKFDAYGSVEELADFQGLT 484

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                TLF         +Q+T+ S  L+ S S    N W S  G S+  A+ N      +T
Sbjct: 485  LDQPTLFAGSLANGHTLQITASSALLLDSESSVTINSWTSSNGGSIVNASVNEKA---ST 541

Query: 192  GGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            G  +                    +  +           ++  I A+G W+  SV     
Sbjct: 542  GRRY--------------------WGATAARSRAFTHRETFPDIGAIGFWSTGSVCGHQP 581

Query: 252  PDLNLITKEHLGGEIIPRSVLLCAFEGIS-YLLCALGDGHLLNFLLNMKTGEL---TDRK 307
             +    T     G+   R+     F GIS +  C         +   ++T +    T +K
Sbjct: 582  RN----TASTAWGKASNRTTTTSLFLGISLWSSCTRLSSQAPRYSFLLRTAKWFQSTSQK 637

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
               L  +    R  + +         DR  +      +++YS    ++V+H+ PF+S  F
Sbjct: 638  MTILSRRGKVSRWGAGRQA--CMCCRDRVPL-----GRIIYSAATAEDVTHIAPFDSEGF 690

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 427
            PD++ +A +  + I  +D  ++ H+  + +GE  RR+ +    + F I +++ +   +E 
Sbjct: 691  PDAIFLATDKNVRIANVDTERRTHVNPLHIGETVRRVAYSPALKAFGIGTIRKELLHDEE 750

Query: 428  EMHFVRLLDDQTFEFISTYPL-----DTFEYGCSILSCSFSDDSNV---YYCVGTAYVL- 478
             +     L D+        P       + E   +++     D +      + +GT+Y+  
Sbjct: 751  IVSSAFQLVDEIVLGKVGRPFALGGEASVELVEAVIRAELDDSTGQPAERFIIGTSYLAD 810

Query: 479  PEENEP--TKGRILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            P+ N+    KGRILV  V+ D    LI   E KGA   L     KL+A +++ + +Y ++
Sbjct: 811  PDVNDSGDVKGRILVLGVDSDRNPYLIVSHELKGACRCLGVMGDKLVAGLSKTVVVYDYI 870

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY----KHEEGAIEERA 591
                 + +L+           + +   G+ I V DLM+S++L+ +       +  + ERA
Sbjct: 871  EDSTTSGKLEKLTTFRPSTFPVDLDISGNMIGVADLMQSMTLVEFVPAKDGRKAKLIERA 930

Query: 592  RDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
            R +   W +AV  L ++ +L A+   NL  + +  +  T+ ++ ++    E HLGE VN+
Sbjct: 931  RHFEYIWATAVCSLGEESWLEADAQGNLMILERQPDAPTEHDQKQMRTTSEMHLGEQVNK 990

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVG- 710
             R   L +   +SD+  +P     TV+G + V+A++  E    L   Q  L  +++ +G 
Sbjct: 991  IR--PLQITATESDI-IVPKAFLATVDGSLYVLANISAEYQSILLPFQERLAGIVRYLGQ 1047

Query: 711  -------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
                   G +  QWR F N K+   A   F+DG+LIE FLDL   R + + + +  SVE 
Sbjct: 1048 AAPEDNEGPSFSQWRGFRNAKRMAGAPFRFVDGELIERFLDLDELRQEAVVEGLGPSVEA 1107

Query: 763  LCKRVEELTRLH 774
            +   VEEL R+H
Sbjct: 1108 MRNMVEELRRMH 1119


>gi|240275059|gb|EER38574.1| DNA damage-binding protein 1a [Ajellomyces capsulatus H143]
          Length = 1134

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 276/558 (49%), Gaps = 33/558 (5%)

Query: 246  VRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLLNMKTG 301
            V + SLPDL +     LG  G+ +PRSVL+        + L  ++ DG + +F  N +  
Sbjct: 581  VVVMSLPDLAIRRSTSLGEPGDAVPRSVLVAEVLPNNPATLFVSMADGSVFSFSFNSEDF 640

Query: 302  ELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
             LT   K++LG+ QP   +        +VFA  ++P++IY+   +++YS VN  + S +C
Sbjct: 641  SLTSMSKLTLGSEQPSFKKLPRGDGLYNVFATCEQPSLIYAVEGRIVYSAVNSDQASRIC 700

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
             FNS A+P S+A+A   EL I  +D  +   I+++ +GE  RR+ +    R F I ++K 
Sbjct: 701  HFNSEAYPGSIALATPSELKITLVDAERTTQIQTLEVGETVRRVAYSAPERAFGIGTIKR 760

Query: 421  --QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-----DSNVY---Y 470
              +  AE     F+ L D+  F  +  Y L+  E   S++   F D      ++++   +
Sbjct: 761  TLEDGAEVIASRFM-LADEIMFRELDIYDLNKDELVESVIRAQFPDGIGSEGNDLFKDLF 819

Query: 471  CVGTAYVLPEENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
             VGT+Y+        +GRIL F +  + +L  +AE   KGA  +L     K++AA+ + +
Sbjct: 820  VVGTSYLDDFGEGSIRGRILAFEVTANRQLAKVAEMPVKGACRALAIVQDKIVAALMKTV 879

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA--- 586
             +Y           L     +      + +   G+ I V DLMKS+S  I ++++GA   
Sbjct: 880  VVYTLSKGQFADYTLSKTASYRTSTAPVDIAVTGNLIAVADLMKSVS--IVEYQQGANGL 937

Query: 587  ---IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
               + E AR +   W +AV  + +D +L ++   NL  + +N  G TD++R RLEV  E 
Sbjct: 938  PDSLTEVARHFQTLWSTAVAPVAEDTWLESDAEGNLVMLHRNVNGVTDDDRRRLEVTSEI 997

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
             LGE VNR R  + +     ++    P    GTV G I +   +       L +LQ+ + 
Sbjct: 998  LLGEMVNRIRPVN-IQGSQGAEAAISPRAFLGTVEGSIYLFGIINPTYQDLLMRLQSAMA 1056

Query: 704  KVIKGVGGLNHEQWRSFNNE-KKTVDAKNFLDGDLIESFLDLSRTRMDEI------SKTM 756
             ++   GG+   ++R+F N  ++T +   F+DG+LIE FL+      +EI          
Sbjct: 1057 GMVVTPGGMPFNKFRAFRNTIRQTEEPYRFVDGELIERFLNCGVELQEEIVGKVIADGVA 1116

Query: 757  NVSVEELCKRVEELTRLH 774
             V+VE +   VEEL R+H
Sbjct: 1117 GVTVESVKGLVEELRRMH 1134



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 14/119 (11%)

Query: 21  KGSYVEVLERYVNLGPIVDFCVVDL------ERQ------GQGQVVTCSGAYKDGSLRIV 68
           +GS+ EV++ + N+ PI+DF ++DL      E Q      GQ ++VT SGA+ DGSLR V
Sbjct: 414 EGSF-EVIQTFANIAPILDFTIMDLGGRAIGESQTHEFSSGQARIVTGSGAFNDGSLRSV 472

Query: 69  RNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
           R+G+G+ E   +  ++ I  +W+LR +    F   L+VSF+ ETR+     + E+EE E
Sbjct: 473 RSGVGMEEVGVLGAMKHITDLWALRVACPQEFSDTLLVSFVDETRVFYFTPDGEVEEKE 531


>gi|384253371|gb|EIE26846.1| hypothetical protein COCSUDRAFT_52476 [Coccomyxa subellipsoidea
            C-169]
          Length = 1205

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 210/823 (25%), Positives = 352/823 (42%), Gaps = 109/823 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI+DF V +L ++   Q+    G     +LR++R G+   E A   L G    +W+L
Sbjct: 402  SLSPIMDFKVANLLKEEIPQLYAMCGRGARSTLRVLRPGLAATEIAVSPLPGNPTAVWTL 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S +DPFD +++VSF + T +L++   + + E    GF     TL       + ++QV 
Sbjct: 462  KRSVNDPFDAYIIVSFTNATLVLSIG--ETVVEVNDSGFLGTVPTLRTQLLTDDSMLQVH 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
               +R + +  R   NEW++P   ++  A  N  QV++A  GG L+Y E+   G L EV+
Sbjct: 520  PSGLRHIRADRRV--NEWRAPGRRTIVKAATNEQQVVIALSGGELIYFELSPTGQLMEVE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPR 269
              ++  ++ CLDI P+ E    S+  AV  + D SVRI SL   ++++   +     +P 
Sbjct: 578  KKEMAGDVVCLDIAPVPEGRQRSRFLAVASY-DSSVRILSLDPEDMMSALAVQMVSAVPE 636

Query: 270  SVLL--------------CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            S+L                +  G  +L   L +G LL   ++  TG+L+D +   LGT+P
Sbjct: 637  SLLFIDSPAADIAGKGEDASGAGGLFLNIGLLNGVLLRTEVDKVTGQLSDTRTRFLGTRP 696

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L   S +    + A S RP + YS   +   + ++ + + +   F S   P+      
Sbjct: 697  PKLFAVSVRGKRSMLALSSRPWLGYSDMGRYTLAPLSYEALDYASGFASDQCPEGFCAVS 756

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC----------- 423
            +  L I T++ + +  + +   L   PR+     +S    +    + +            
Sbjct: 757  KSMLRILTLERLGEAFNQQVTRLRYTPRKFVVHPESNMLIVAEADHAAVPLAERRAVEDG 816

Query: 424  -----------------AEESEMH------------FVRLLDDQTFEFISTYPLDTFEYG 454
                             A E E H             +R+LD  + +  S   LD  E  
Sbjct: 817  MEMDAALTEGIEFDEERAAEEEQHGAPKNSTGRWASCIRVLDPTSLQTSSVLELDGNEAA 876

Query: 455  CSILSCSFSD--DSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
             S+    FS+  +  +   VGT   L   P   +    R+  F     +L+LI +  T G
Sbjct: 877  VSLCLLRFSNWPEEGMVLAVGTVQGLAFYPRTADEGYIRLYRFRDSGRQLELIHKTPTGG 936

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG---HILALYVQTRGDFI 566
               +L AF G+LLA +   +++Y     + G ++L  +C H     HI  L   T GD I
Sbjct: 937  IPGALAAFKGRLLAGVGPTLRIY-----EAGKKKLLRKCEHRKLPTHIATL--ATSGDRI 989

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
             VGDL +S+    YK  E A+ E A D     ++A   LD D   GA+   N+F  R   
Sbjct: 990  FVGDLQESMHYFRYKANENALYEYADDIAPRHLTAALPLDYDTVAGADKFCNIFVTRLPR 1049

Query: 627  EGATDEERG------------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            + +T  E                    +LE V  +H+G+ V   +   L         G 
Sbjct: 1050 DVSTQVEEDPTGGKFAGAAGLLNGAPHKLEDVVNFHVGDLVTSLQRAVL-------QPGG 1102

Query: 669  IPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               +++ TV G IG +   P  E   F   L+ +LR+    +GG +H  +R         
Sbjct: 1103 REVLLYATVMGAIGAMLPFPSREDVDFFSHLEMHLRQEHPPMGGRDHMSYRG-----SYF 1157

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              K+ +DGDL E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1158 PVKDVIDGDLCEHFSQLPAAKQKSIADELERTPGEILKKLEDI 1200


>gi|331247470|ref|XP_003336363.1| DNA damage-binding protein 1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 962

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 228/861 (26%), Positives = 381/861 (44%), Gaps = 129/861 (14%)

Query: 10  QLIKL-----NLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 63
           QL+KL     +L PD   S   EV+  + NL PI DFCV +  +    Q+VTCSG+++DG
Sbjct: 71  QLLKLPSPTSSLNPDNTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTCSGSHRDG 130

Query: 64  SLRIVRNGIGINEQASVELQGIKGMWSLRSSTD----DPFDTFLVVSFISETRILAMNLE 119
           SLR++++GIGI E  S+E+ G++ +W+LRSST     + FD  LV+S    TR LA+N +
Sbjct: 131 SLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALNED 190

Query: 120 DELEETEI-EGFCSQTQTLFC------HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 172
             +EE  +  GF S   T+         D+     +QVT  S ++++  +      W+  
Sbjct: 191 GTIEEIGLFNGFESDVPTILAGNLLDGSDSTTRYSIQVT--SRKIIAGDAL----VWEPD 244

Query: 173 PGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSY 232
              S+  A  + +   ++     +V L I DG   E    +L  +IS L I+        
Sbjct: 245 DAKSITRAALSVTTCAVSL-KEQVVVLCIKDGKFVEKGTYKLLNDISSLAID------QS 297

Query: 233 SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS----YLLCALGD 288
               A   W    + I S+   + I + +   + +  S+ +  FEG       LL  LGD
Sbjct: 298 ENFVAAAQWVTNCIEIISVSSSSTICRVNTDSDFMVNSLKMTNFEGTESDGCRLLIGLGD 357

Query: 289 GHLLNFLLNMKTG---ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI--YSSN 343
           G ++N  L   TG   E    +  +LG +PI   +  +     ++A SD+PT+I    +N
Sbjct: 358 GKIMNVALG-PTGMHVEGDSPRFTTLGIRPIEFVSMRNATGEFLWANSDQPTIIDRIQNN 416

Query: 344 KKLLYSNVNLK--EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 400
            +  Y+ V ++   VS     ++  F DSL +A   E+ IG ++  +K++I  I LG E 
Sbjct: 417 GRFAYTPVTVQGGSVSSATGLHARFFQDSLVLASNDEIRIGKLNTTEKMNILKISLGNEQ 476

Query: 401 PRRICHQEQSRTFAICSLKNQSCAEESEMHFV---RLLDDQTFEFISTYPLDTFEYGCSI 457
           PRRI H E  + + +   + +   +   +H +   ++ DD+TF+              SI
Sbjct: 477 PRRIAHSEDMKAYGVVCARLELDQDTGTIHRIGTFKVFDDETFQC------------SSI 524

Query: 458 LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEK---------ETK 508
            +    ++   ++ +GT  +   E E T GRIL     + K  L A+K         +  
Sbjct: 525 AAVKLGEEMIEHFVIGTGVIKSTEAEATIGRILAIRELNSKQDLTAKKRHFELTNVGKLS 584

Query: 509 GAVYSLNAF-NGKLLAAINQKIQLYKWMLRD--------------------DGTRELQSE 547
           GAV  +    NG  +A+ N  +  +     D                    DG   L   
Sbjct: 585 GAVGGVGGLPNGMFVASANAFVHAFGLKKGDSGRAFPSGTDTVLAGSVPEMDGGFRLLDT 644

Query: 548 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD- 606
            G  G  ++  V T G  ++VGDL KS+ LL +  E   +  +ARD++A  +  +  +  
Sbjct: 645 WG--GGFVSQTVVTDGTKVLVGDLYKSVVLLEFDLEHLELAVKARDFSAMSVRPIGAISE 702

Query: 607 -DDIYLGAENNFNL---------FTVRKNSEGATDEERGRLEVVG---------EYHLGE 647
            D    G++   +            V  +  G +DE+  +   +          +Y+   
Sbjct: 703 RDPTSPGSDGKSDRPNQDAHREDHGVHLDDGGGSDEDEEQALELEQEEEEEEDQDYNQSS 762

Query: 648 FVNRFRH-----------------GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PH 689
           + +  +                  GSLV R  +S +     +IF T  G IG+IA +   
Sbjct: 763 YHDHLQPPHSPTFDQDQNPAAYGGGSLVPRFIESSLIGETKLIFVTSTGGIGLIAKIHSK 822

Query: 690 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
           ++   L + Q++L K+   VG L H  +R F  E + + +  FLDGD +E  LDL+   +
Sbjct: 823 KKTKQLARFQSDLSKISTSVGNLAHSAYRMFKTESRKIPSMGFLDGDFLEGCLDLTPDEV 882

Query: 750 DE-ISKTMNVSVEELCKRVEE 769
           +  + K M +  EE   +  E
Sbjct: 883 ENLVKKMMALKAEEAQAKATE 903


>gi|328869269|gb|EGG17647.1| CPSF domain-containing protein [Dictyostelium fasciculatum]
          Length = 1194

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 202/823 (24%), Positives = 369/823 (44%), Gaps = 114/823 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L PIVDF V DL ++G  Q+   SG  +  +LR++R+G+ I +    +L G   G+W++
Sbjct: 395  SLSPIVDFKVADLAQEGTPQMYALSGVSERANLRVLRHGLPITQMVDSQLPGTPAGIWTI 454

Query: 92   RSS--------------TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTL 137
              S               + P D ++VVSF+  T +L +   + +EE +  G  S T T+
Sbjct: 455  PQSLTTMRNPQYQGIGTVESPADRYIVVSFVGSTLVLGVG--ETVEEVQDSGILSTTTTI 512

Query: 138  FCHD--AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
                  A  + +VQ+ +  +R +++  R   +EW++P   ++++A AN  QV++  GG  
Sbjct: 513  LIRSMGANLDSIVQIFAQGIRHINAERRV--SEWRAPGRKTISIAAANQQQVIICIGGSE 570

Query: 196  LVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDL 254
            ++Y E+   G LTEV    +  +I+C++  PI    + S+  A+  + D  VRI SL   
Sbjct: 571  IIYFELDPAGNLTEVFKKDMRKDINCIEFAPIPRGRTMSRFVAISDY-DGPVRILSLERD 629

Query: 255  NLITKEHLGGEIIPRSVLLCAFE------------------GISYLLCALGDGHLLNFLL 296
            N++ +  +      +   LC  E                  G  +L   L +G L   +L
Sbjct: 630  NMLNQVSMVDTDRQQVEQLCVAELMVHEPGVDQQIVNTQRQGTLFLHIGLKNGVLKRAVL 689

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEV 356
            +  TGE++D +   LG +PI       K +  V A S R  + YS+  +   + ++++ +
Sbjct: 690  DGLTGEISDMRTRILGRRPIKFFRVKIKGSPAVLALSTRVWMCYSNLGRYEITPLSVEPL 749

Query: 357  SHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFA 414
             H    +S   P+ +    E  L I +I+ +  L  +  IPL   P+R + H + +   +
Sbjct: 750  DHAASLSSDQCPEGIVATSENNLKIFSIEKLGDLFNQVQIPLSCTPKRFVVHPQTNYIVS 809

Query: 415  ICSLKNQSCAEESEM---------------HFVRLLD---DQTFEFISTYPLDTFEYGCS 456
            I +  N S   E E+                 +R+LD   +QT + +S   L   E   S
Sbjct: 810  IETEHNFSTQFEPELAQDLEMPRAGKGKWKSVIRILDPVSNQTLDLVS---LTNNEAAFS 866

Query: 457  ILSCSFSDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYS 513
            I +  F  +  V   VG A    + P         +  F+    KL L+   ET    ++
Sbjct: 867  IGTVMF-QEGEVMLAVGCAKDVQLQPRGFSSASIHLYQFVENGQKLALVHTTETDLIPHA 925

Query: 514  LNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
            + +F GKL+A +   ++LY    K +LR    R++ ++           +Q++GD IVV 
Sbjct: 926  VGSFQGKLIAGVGNVLRLYELGKKKLLRKCENRKVPNQITS--------IQSQGDRIVVS 977

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD---------------------DD 608
            D+ +S+    Y+  E  +   A D    ++++  +LD                      D
Sbjct: 978  DVQESVHFFTYRRSENVLVLFADDTAPRFVTSCVMLDFDTVAIADKFGTIAVVRMPPSSD 1037

Query: 609  IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
              +  EN  ++ T+   S+ A +    +LE+V  +++GE        SL+       VG 
Sbjct: 1038 TDIDIENELDIGTLTTKSKLALNGAANKLELVASFYVGETCCNLTRTSLM-------VGG 1090

Query: 669  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               +I+ T+ G IG +      E+  F  +L+  +R+  + + G +H  +RS+       
Sbjct: 1091 SEVIIYTTLGGAIGALIPFSSREEVDFFAQLEMQMRQEKESLCGRDHLSYRSY-----YF 1145

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              KN +DGDL E +  L  T+   +++ +  +  E+ K++E++
Sbjct: 1146 PVKNVIDGDLCEQYSTLDATKQRSVAEELIRNPSEVLKKLEDI 1188


>gi|291000406|ref|XP_002682770.1| predicted protein [Naegleria gruberi]
 gi|284096398|gb|EFC50026.1| predicted protein [Naegleria gruberi]
          Length = 1216

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 218/839 (25%), Positives = 384/839 (45%), Gaps = 103/839 (12%)

Query: 11   LIKLNLQPDAKG-SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
            L+  N QP     + +E++    +L P+ D  V DL  +G  Q+   +G     SLR +R
Sbjct: 396  LMSDNDQPSTTNVTCLELVNEIKSLAPVTDMKVTDLMGEGTPQIYCLNGRGPTSSLRSLR 455

Query: 70   NGIGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
             G+ +NE+ +  L Q    +++++ S +D FD ++++SF   T +L++  E+  E TE  
Sbjct: 456  YGLPVNEEVAAPLDQQATAIFTVKESMNDTFDKYIILSFSEFTMVLSVG-ENVAEVTE-S 513

Query: 129  GFCSQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
            GF + T+T++  +     + VQV    +R +     +  NEW S     +  A  N  Q+
Sbjct: 514  GFLTTTKTIYASNIGESGEFVQVHPKGIRHIHP---DRVNEWNSG-NKIIEKAAVNGYQI 569

Query: 188  LLATGGGHLVYLE--IGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
            +++  GG ++Y E     G L E +   L  +++CL ++PI +  +  +  AVG + D +
Sbjct: 570  VVSLSGGEIIYFEYDTSSGNLIETERNDLSQDVACLALSPIQDGRTRGRFLAVGFY-DKT 628

Query: 246  VRIFSLPD---LNLITKEHLGGEIIPRSVLLCAF-------EGISYLLCALGDGHLLNFL 295
            VR+ SL +   +++++++ L  +  P S+ L          E   YL   L +G LL   
Sbjct: 629  VRLISLGEYDMMSILSRQALPAD--PESLSLIELQSGHSRDETSLYLNIGLSNGILLRST 686

Query: 296  LNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE 355
            ++  TGEL+D +   LGT+ + LR    +    + A S +P +  S N K+  + ++   
Sbjct: 687  VDSSTGELSDTRSRFLGTKGVKLRNVKVRGDNAILALSSKPWLGNSINGKIEMTPLSYPA 746

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDD-IQKLHIRSIPLGEHPRR-ICHQEQSRTF 413
            ++  C F+S    D L       L I TI   + K     IPL   PR+ + H E S   
Sbjct: 747  LNSACNFSSEQIRDGLVSITAEHLRIITISSLLDKFTPEIIPLNYTPRKFVVHDETSHMI 806

Query: 414  AICSLKNQSCAEESEM-HFVR---------LLDDQTFEFISTYP---------------- 447
             + +  N S    ++   +++         L  D  +  I T P                
Sbjct: 807  ILQTDHNVSKENSTDRPDYIKVDESQKDPSLSKDVEYGAIKTKPKSNLWASYIRVYSPKK 866

Query: 448  ---LDTFEY-----GCSILSCSFS------DDSNVYYCVGTAYVLPEENEPTK----GRI 489
               LD FE        SI +C FS        +     VGTA  +  +  PT+    G I
Sbjct: 867  QANLDEFEIEDNEAAFSITTCKFSTSLSGAKSNESLIIVGTAKNM--KLYPTRTCDCGYI 924

Query: 490  LVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
             VF I EDGKLQLI + E +   Y+L+AF G+LL  +   +++Y     D G ++L  +C
Sbjct: 925  NVFQISEDGKLQLIHKTEVEDVPYALHAFRGRLLVGVKNMLRIY-----DLGKKKLLRKC 979

Query: 549  GHHGHI-LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
             +         +   G+ I VGD+ +S   + +   E ++   A +    W++A  ++D 
Sbjct: 980  ENKSFPNFITSIAVDGNRIFVGDITESFHFVKFNSSENSLTIFADNTTPRWLTASALVDH 1039

Query: 608  DIYLGAENNFNLFTVRKNSEGATDE-------------ERGRLEVVGEYHLGEFVNRFRH 654
            +   G +   N F  R  S+  +DE             ERG L   G       + +F  
Sbjct: 1040 NTIAGGDKFGNFFISRLPSD-VSDELEDSSTGKEKWIWERGLLN--GAPQKATEIVKFYV 1096

Query: 655  GSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGG 711
            GS++  +  + +  G    +I+ T+ G +GV      ++ + F  +L+ +LR+    + G
Sbjct: 1097 GSMITSIYKTSLIAGGPSILIYTTITGAVGVFFPFTSKKDIEFFTQLEMHLREKNPPLCG 1156

Query: 712  LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +H  +RS+    K+V     +DGDLIE F D+      +IS+ +  ++ E+ K++E++
Sbjct: 1157 RDHLAYRSYYFPVKSV-----VDGDLIEQFNDVDLQTKTKISEDLQRTINEIAKKIEDM 1210


>gi|403177920|ref|XP_003888718.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375173263|gb|EHS64847.1| hypothetical protein PGTG_22575 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1326

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 193/679 (28%), Positives = 320/679 (47%), Gaps = 78/679 (11%)

Query: 10   QLIKL-----NLQPDAKGSY-VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 63
            QL+KL     +L PD   S   EV+  + NL PI DFCV +  +    Q+VTCSG+++DG
Sbjct: 406  QLLKLPSPTSSLNPDNTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTCSGSHRDG 465

Query: 64   SLRIVRNGIGINEQASVELQGIKGMWSLRSSTD----DPFDTFLVVSFISETRILAMNLE 119
            SLR++++GIGI E  S+E+ G++ +W+LRSST     + FD  LV+S    TR LA+N +
Sbjct: 466  SLRVIKHGIGIRESGSLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALNED 525

Query: 120  DELEETEI-EGFCSQTQTLFC------HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSP 172
              +EE  +  GF S   T+         D+     +QVT  S ++++  +      W+  
Sbjct: 526  GTIEEIGLFNGFESDVPTILAGNLLDGSDSTTRYSIQVT--SRKIIAGDAL----VWEPD 579

Query: 173  PGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSY 232
               S+  A  + +   ++     +V L I DG   E    +L  +IS L I+        
Sbjct: 580  DAKSITRAALSVTTCAVSL-KEQVVVLCIKDGKFVEKGTYKLLNDISSLAID------QS 632

Query: 233  SQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGIS----YLLCALGD 288
                A   W    + I S+   + I + +   + +  S+ +  FEG       LL  LGD
Sbjct: 633  ENFVAAAQWVTNCIEIISVSSSSTICRVNTDSDFMVNSLKMTNFEGTESDGCRLLIGLGD 692

Query: 289  GHLLNFLLNMKTG---ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI--YSSN 343
            G ++N  L   TG   E    +  +LG +PI   +  +     ++A SD+PT+I    +N
Sbjct: 693  GKIMNVALG-PTGMHVEGDSPRFTTLGIRPIEFVSMRNATGEFLWANSDQPTIIDRIQNN 751

Query: 344  KKLLYSNVNLK--EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EH 400
             +  Y+ V ++   VS     ++  F DSL +A   E+ IG ++  +K++I  I LG E 
Sbjct: 752  GRFAYTPVTVQGGSVSSATGLHARFFQDSLVLASNDEIRIGKLNTTEKMNILKISLGNEQ 811

Query: 401  PRRICHQEQSRTFAICSLKNQSCAEESEMHFV---RLLDDQTFEFISTYPLDTFEYGCSI 457
            PRRI H E  + + +   + +   +   +H +   ++ DD+TF+ + TY     E G SI
Sbjct: 812  PRRIAHSEDMKAYGVVCARLELDQDTGTIHRIGTFKVFDDETFQLLYTYNFGPMEQGSSI 871

Query: 458  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEK---------ETK 508
             +    ++   ++ +GT  +   E E T GRIL     + K  L A+K         +  
Sbjct: 872  AAVKLGEEMIEHFVIGTGVIKSTEAEATIGRILAIRELNSKQDLTAKKRHFELTNVGKLS 931

Query: 509  GAVYSLNAF-NGKLLAAINQKIQLYKWMLRD--------------------DGTRELQSE 547
            GAV  +    NG  +A+ N  +  +     D                    DG   L   
Sbjct: 932  GAVGGVGGLPNGMFVASANAFVHAFGLKKGDSGRAFPSGTDTVLAGSVPEMDGGFRLLDT 991

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
             G  G  ++  V T G  ++VGDL KS+ LL +  E   +  +ARD++A  +  +  + +
Sbjct: 992  WG--GGFVSQTVVTDGTKVLVGDLYKSVVLLEFDLEHLELAVKARDFSAMSVRPIGAISE 1049

Query: 608  DIYLGAENNFNLFTVRKNS 626
              ++ A++ FN+FTV+ +S
Sbjct: 1050 REFVAADSEFNMFTVQYDS 1068



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLN 713
            GSLV R  +S +     +IF T  G IG+IA +   ++   L + Q++L K+   VG L 
Sbjct: 1151 GSLVPRFIESSLIGETKLIFVTSTGGIGLIAKIHSKKKTKQLARFQSDLSKISTSVGNLA 1210

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDE-ISKTMNVSVEELCKRVEE 769
            H  +R F  E + + +  FLDGD +E  LDL+   ++  + K M +  EE   +  E
Sbjct: 1211 HSAYRMFKTESRKIPSMGFLDGDFLEGCLDLTPDEVENLVKKMMALKAEEAQAKATE 1267


>gi|402592185|gb|EJW86114.1| CPSF A subunit region family protein [Wuchereria bancrofti]
          Length = 278

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 110/265 (41%), Positives = 170/265 (64%), Gaps = 6/265 (2%)

Query: 490 LVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
           ++F   +G  +++L+ EKE KGA YS+ + +GKL+ A+N  ++L++W       +EL+ E
Sbjct: 1   MMFQASEGPERMRLVYEKEIKGAAYSIQSMDGKLVVAVNSCVRLFEWT----ADKELRLE 56

Query: 548 CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
           C    ++ ALY++T+ D I+VGDLM+S+SLL YK  E   E+ ARD+  NWMSA EI+D 
Sbjct: 57  CSDFDNVTALYLKTKNDLILVGDLMRSLSLLSYKSMESTFEKVARDFMTNWMSACEIIDS 116

Query: 608 DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
           D +LGAEN++NLFTV K+S     EE  RL+ +G ++LGE VN F HGSL     D    
Sbjct: 117 DNFLGAENSYNLFTVMKDSFTVFKEEGTRLQELGLFYLGEMVNVFCHGSLTATQVDVAPL 176

Query: 668 QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
              ++++GT +G IGVI  +P   Y FL+ +Q  L +  +    ++H Q+R+F  EK++ 
Sbjct: 177 YHSSILYGTSDGGIGVIVQMPPVLYTFLQDVQKRLAEYAENCMRISHTQYRTFETEKRSE 236

Query: 728 DAKNFLDGDLIESFLDLSRTRMDEI 752
               F+DGDLIES LD+ +  ++++
Sbjct: 237 APNGFIDGDLIESLLDMGKDSVEQV 261


>gi|403411971|emb|CCL98671.1| predicted protein [Fibroporia radiculosa]
          Length = 1212

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 204/812 (25%), Positives = 362/812 (44%), Gaps = 96/812 (11%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L P++D  V++L       QV    G     + R++R+G+ + E  S +L GI   +W+
Sbjct: 416  SLSPVLDAKVMNLLPNSDTPQVFAACGRGGRSTFRMLRHGLEVEEVVSSDLPGIPNAVWT 475

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +   DDP+D+++++SF++ T +L +   + +EE +  GF S   TL      Y+ L+QV
Sbjct: 476  TKLKEDDPYDSYIILSFVNGTLVLCIG--ETIEEVQDTGFLSSAPTLAVQQIGYDALLQV 533

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V S  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 534  HPHGIRHVLSDKRV--NEWRVPQGKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEY 591

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 592  QDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALTAP 650

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +  S++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 651  PSAICIADMLDAGINKTQPTSFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPIKLI 710

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                +    + A S R  + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 711  RVLVQRNPGILALSSRSWLNYTYQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISGSVL 770

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRR-ICH----------------QEQSRTFAICSLKNQ 421
             I  I  +  KL   +IPL   PR+ I H                 +++   A+  L+ Q
Sbjct: 771  RIFQIPKLGTKLKQDAIPLSYTPRKFISHPTNGLFYLIEGDHRVRSDEASAKALGELRQQ 830

Query: 422  SCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                + E+                     +R+++    + ++  PLD  E   S+   SF
Sbjct: 831  GKMVDDELVNLPPETFGRQKAPAGTWASCIRIINPVDAKTVNIIPLDNNEAAFSLAVVSF 890

Query: 463  SDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S  S  ++  VGTA   ++ P        R   F  +   L+L+ + ET     ++  F 
Sbjct: 891  SARSGELHLVVGTAQDTFLAPRSCTSGFLRTYRFTDDGTNLELLHKTETNDVPLAVLGFQ 950

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISL 577
            G+L+A + + ++LY     D G ++L  +  +     A+  + T+G  I+VGD+ +S+S 
Sbjct: 951  GRLVAGVGKALRLY-----DMGKKKLLRKVENKTFASAIVSLATQGSRILVGDMQESVSF 1005

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 634
             +YK  E  +   A D    W SA+ ++D +    A+   N++  R   K SE   D+  
Sbjct: 1006 AVYKPPENKLLVFADDTQPRWTSAMTMVDYNTVASADRFGNIYVNRLDPKVSEQVDDDPT 1065

Query: 635  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
            G               + E++  +H+G+ V      SLV        G    +++  ++G
Sbjct: 1066 GAGILHEKGLLAGAPHKTELLSHFHVGDIVTSINKVSLV-------AGGREVLLYTGLHG 1118

Query: 680  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL 
Sbjct: 1119 TIGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGY-----YVPVKAVVDGDLC 1173

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E+F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1174 ETFARLPASKQSAIAGELDRTVGEVLKKLEQL 1205


>gi|323447810|gb|EGB03719.1| hypothetical protein AURANDRAFT_72671 [Aureococcus anophagefferens]
          Length = 760

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 205/763 (26%), Positives = 349/763 (45%), Gaps = 83/763 (10%)

Query: 40  FCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP 98
            CVV+  + +GQG++V C GA   G+L IV +G+ +   AS     I  +  + SS  + 
Sbjct: 1   MCVVEPADAEGQGRIVACCGAGDAGTLHIVHDGLDVTGTASRSPTRITNLSLILSSRGE- 59

Query: 99  FDTFLVVSFISETR--ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV- 155
               ++VS  + T   ++A +       +  +GF     T++C + + +  VQVT  ++ 
Sbjct: 60  ---MVIVSTEAATHAFLVANDGSTTAFPSNPQGFDETISTIYCCN-LGDAAVQVTPRAIS 115

Query: 156 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLE 215
           +  +  +R     W+   G        N + +L++   G LV L   D  +  +  A L+
Sbjct: 116 KFYTGENRRKLKTWRPKDGRITAATGNNGAVILISLSNGKLVLL---DCDVEPIASAALD 172

Query: 216 YEISCLDINPIG----ENPSYSQIAAVGMWTDISVRIFSLPD--LNLITKEHLGGE---- 265
            E SC+ ++P G    ++   +   AV +W+D  V   S+ D  LN I    +  +    
Sbjct: 173 DEASCVALSPSGSASFKDLGMAHATAVSVWSD-PVSCVSVYDSILNKIHDPTITWQDKSS 231

Query: 266 -----IIPRSVLLCAFEGISYLLCALGDG--HLLNFLLNMKTGELTDRKKVSLGTQPITL 318
                   R+++L       YL CA GDG   +  F         T  + VSLG  P  +
Sbjct: 232 NEQTLQFVRALVLSEINEKPYLFCASGDGLVTVYQFACGNDVVTTTRLRAVSLGVLPARV 291

Query: 319 RTFSS--KNTTHVFAASDRPTVI----YSSNKKLLYSNVNLKEVSH-----MCPFNSAAF 367
               +  +    V   SDR  V+     S  + ++ S     E +      + P +  A 
Sbjct: 292 LILGAFDRMARSVLCFSDRACVVRRGCASHLQWVVASAKAFGETTEWRYYIVVPLHKKAT 351

Query: 368 PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 427
              LA   +    I  ID  Q + + S+PL E P  ICH  QS  FA+C++ ++    + 
Sbjct: 352 TAILACGSQ--FAICKIDANQGIKVVSVPLAEQPLCICHDLQSHLFAVCTIDHREGDNQG 409

Query: 428 EMHFVRLLDDQTFEFISTYPLDTFE--YGCSILS---CSFSDDSNVYYCVGTAYVLPEEN 482
            + F+R  D+  +  +    L+  E    CSI+S    S   D   ++ VGTA+   E +
Sbjct: 410 VIRFLR--DEAPYNDVHREALEPLEIPLCCSIISLDSISTYKDQRAHFVVGTAFAAQEND 467

Query: 483 -EPTKGRILVFIVEDGKLQLIAEK----ETKGAVYSLNAFNGKLL-AAINQKIQLYKWML 536
            EP  GR+++F    G+  +        E  GAVY + A    LL  A+N  I +Y  ++
Sbjct: 468 FEPCSGRMIIF--RSGQANVAPSVLFFVEANGAVYDVAAMRASLLVCAVNHAIHIYDPVV 525

Query: 537 RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
           RD+    L+    + G ++AL VQ  G+ IVVGD+M+S++LL    ++  I E A DYN 
Sbjct: 526 RDNRRGHLKPRASYDGLVVALKVQCYGNLIVVGDMMRSVTLLNLIRQKMIIVEVACDYNT 585

Query: 597 NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
           NW+ A+E++ D  ++ A+ + +L  + ++  G +D+    LE   + HLG+ V  F  GS
Sbjct: 586 NWVCALEVIGDGSFIIADASGSLVAL-ESLYGNSDKGY-FLESRAKMHLGDVVTCFARGS 643

Query: 657 LVMR--LPDSDVGQIPT-VIFGT-----------------VNGVIGVIASLPHEQYLFLE 696
           ++ +    +  V ++ T +IFG                  V+G IG I S+    +  LE
Sbjct: 644 IMTQDDWRNPKVSKVATPLIFGCVTSSRVLVLTPLIARYQVSGAIGCIVSIDDVTHSLLE 703

Query: 697 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK---NFLDGD 736
           +L   L +   GVG  +HE +++ +N   T +A    +F+D +
Sbjct: 704 RLSKVLLEFHSGVGDFDHETFQALHNNVATCNAAPMDDFIDAN 746


>gi|348667612|gb|EGZ07437.1| hypothetical protein PHYSODRAFT_565381 [Phytophthora sojae]
          Length = 1197

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 212/847 (25%), Positives = 361/847 (42%), Gaps = 119/847 (14%)

Query: 13   KLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGI 72
            +L+  P  K + +++     +L P+    V DL  +   Q+    G     SLR++R+G+
Sbjct: 376  ELSTFPLRKLTNLQLASSMPSLSPVTQLLVDDLANEQTPQMYALCGNSNRSSLRVLRHGL 435

Query: 73   GINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFC 131
             I E A+  L G+ K +W L+ S  DP+D ++VVSF  E   L + + + +EE    GF 
Sbjct: 436  PITEMAASALPGVAKAVWCLKESYADPYDKYIVVSF--EDATLVLEVGETVEEVTQSGFL 493

Query: 132  SQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
                +L       +  +Q+ +  +R V     +   EWK+P    +    AN+ QV+++ 
Sbjct: 494  RDHGSLLVALLEDDSKLQIHANGIRHVPKF--QPVTEWKAPGKKVIEHCAANSRQVVISL 551

Query: 192  GGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
             GG ++Y E+G  G L E     L +E+  LD+  + E     Q  AVG W D +VRI S
Sbjct: 552  AGGEIIYFELGQSGELAEKGKLDLGFEVCSLDLGEVPEGRQRFQFMAVGSW-DNTVRILS 610

Query: 251  L-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLN 297
            L P+     K  L     P ++ L   +               +L   L +G L   L++
Sbjct: 611  LDPNDLFRQKSTLALTSHPHTLCLAQLQSEPSTPDSEHSSQSLFLSIGLDNGVLQQSLID 670

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS 357
              T  LTD +   LGT P+ L   + +    + A S R  + Y    +   + ++ + +S
Sbjct: 671  PITANLTDSRSRFLGTNPVKLFRVAVEGKRSILALSSRSWISYFHQTRRHLTPLSCELLS 730

Query: 358  HMCPFNSAAFPDSL-AIAKEGELTIGTIDDI------QKLHIRSIPLGEHPRRICHQEQS 410
            +   FNS   P  + A+  EG + I T+D +      QK ++R  P     + + H    
Sbjct: 731  YASSFNSEQCPGGIVALTNEG-MKILTVDQLGDTFNQQKCNLRYTPR----KAVVHAASR 785

Query: 411  RTFAICSLKNQ-----------------SCAEESEMH----------------------- 430
            R   I S  N+                 S AE+ + +                       
Sbjct: 786  RLVVIESDHNEYGAAYKRQHGLRIPDIRSAAEQDDEYEDEINEALLFPRGPLPAEKDKWA 845

Query: 431  -FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA--YVLPEENEPTK 486
              VR++D  + + +    LD  E   SI SC F D     +  VGT     L  +  P  
Sbjct: 846  SCVRIVDPVSCQTVVCEELDVDERARSIASCVFHDRGGEAFIIVGTVKKMQLHPQKAPAG 905

Query: 487  GRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGT 541
            G + V+ +VE  +L L+   E     +++  F G+LL ++ + +++Y    K MLR    
Sbjct: 906  GYLRVYRVVEGMQLVLVHTTEIDDIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCEN 965

Query: 542  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            R   S        + + ++  GD I   D+ +S   + YK +E  +   A D    ++++
Sbjct: 966  RNFPS--------ILVELKAAGDRIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITS 1017

Query: 602  VEILDDDIYLGAENNFNLFTVRKNSE-----------------GATDEERGRLEVVGEYH 644
              +LD D   GA+   N+F  R  SE                 G  +    +LE V ++H
Sbjct: 1018 SVLLDYDTLCGADKFGNVFVSRLPSEVSDEIDNPTANRILWDSGLLNGAPNKLEQVAQFH 1077

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLR 703
            +G+ V      SLV        G I  +I+ T+ G IG +      Q + F   L+  +R
Sbjct: 1078 VGDVVTSMVRTSLV-------PGGIEAIIYATIMGRIGALIPFTSRQDVDFYTHLEMYMR 1130

Query: 704  KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
            +    + G +H  +RS+      +  KN  DGDL E F  LS  +   +++ ++ +  E+
Sbjct: 1131 QEQPPLCGRDHLSYRSY-----YIPVKNVTDGDLCEQFSSLSVEKQASVAEDLDRTPAEV 1185

Query: 764  CKRVEEL 770
             K++E++
Sbjct: 1186 LKKLEDI 1192


>gi|388582014|gb|EIM22320.1| hypothetical protein WALSEDRAFT_60013 [Wallemia sebi CBS 633.66]
          Length = 1208

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 191/801 (23%), Positives = 362/801 (45%), Gaps = 81/801 (10%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  V  +      Q+ T SG     SLR++R+G+ + E  S EL     G+W+L
Sbjct: 420  SLAPILDAKVQSIYAGDTPQIYTASGVGSRSSLRVMRHGLDVIEAVSSELPAPPNGIWTL 479

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D +D+ +V+SF++ T +L +   + +EE    G  +   TL       + ++QV 
Sbjct: 480  KQNAQDMYDSLIVLSFVNGTLVLGIG--ESIEEVSDTGLATSVSTLSVDQLGEDSMIQVF 537

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVK 210
               +R + +  R   NEWKSP    +  +T N+ QV +A   G LVY E+  +G L E +
Sbjct: 538  PQGIRHILNDKR--VNEWKSPSDTYITASTTNSRQVCVALSNGELVYFEMDNEGQLNEFQ 595

Query: 211  HAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGG-- 264
              + +E  ++ + I  + +        A+G   D ++RI SL P+  L +++ + +    
Sbjct: 596  ERKSMESTVTTMSIGEVPQGRQRCPYLALGC-DDQTIRIVSLDPENTLEVVSVQAVTAQP 654

Query: 265  ------EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
                  EI+ +S  L  +    ++   L +G LL  +L+   G L D +   LG +P+ L
Sbjct: 655  SSICVAEILDKS--LDKYNPTLFVNIGLANGVLLRTVLDTVNGSLADTRTRFLGAKPVVL 712

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
            R  +      V A S R  + Y+   ++ ++ +  + +  +  FN+   PD L    +  
Sbjct: 713  RRVTVDKQQAVMALSTRTFLNYAHGDQMYFTPLLYEPLDQVSSFNAELCPDGLIGISDTV 772

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF------ 431
            L I T+ ++ Q++   S+ L   PR+I     +  F      +++ + E +         
Sbjct: 773  LRIFTLPNVGQRMKQDSVALSYTPRKILLHPTAPLFLTIESDHRTISRERQAELLTSKGY 832

Query: 432  -------------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS-DD 465
                                     VR++D  T   ++   LD  E   S     ++  +
Sbjct: 833  NPEEHNFDAVQFGNVRMEAGNWASCVRMIDPVTLTTVNKVELDNNEAAFSAAFVQWAGHE 892

Query: 466  SNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLL 522
               +  VGTA    ++P+ ++    R+   + +D +L+L+ + +     Y+++AF G+LL
Sbjct: 893  DETHLVVGTAKDRMMMPQSHKEAYLRVYK-VTQDSQLELLHKTDIDDVPYAIHAFKGRLL 951

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYK 581
            A + + ++LY     D G + L  +C +      +  +   G  I VGD+ +S+S  +YK
Sbjct: 952  AGVGKALRLY-----DLGKKRLLRKCENKSFAAGIVNLNVVGSRIYVGDMQESVSFAVYK 1006

Query: 582  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEER---GR 636
              E  +   A D  + W +    +D D   G +   N+F  R  K++    DE+    G 
Sbjct: 1007 APENRLLVFADDIMSRWTTTATPVDYDTVAGGDKFGNIFITRVDKSTSEWVDEDESGGGL 1066

Query: 637  LEVVGEYH----LGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASLPHE 690
            L   G YH      + +  F  G +V  +  S +  G    +++  ++G +G+I     +
Sbjct: 1067 LHARGLYHGAPNRSKLLAHFYVGDIVTSITKSQLSAGGRDVLVYTCLHGTVGMIIPFASK 1126

Query: 691  QYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              + F+  L+ ++R+    + G +H  +RS+      +  K F+DGDL E +  L  T+ 
Sbjct: 1127 DDIEFMSTLELHMRQESPSLVGRDHLGFRSY-----YIPCKAFVDGDLCELYASLPVTKQ 1181

Query: 750  DEISKTMNVSVEELCKRVEEL 770
              I+  ++ +  E+ K++E L
Sbjct: 1182 QAIANELDRTSGEVLKKIESL 1202


>gi|302807210|ref|XP_002985318.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
 gi|300147146|gb|EFJ13812.1| hypothetical protein SELMODRAFT_181612 [Selaginella moellendorffii]
          Length = 1207

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 211/827 (25%), Positives = 371/827 (44%), Gaps = 115/827 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  + +L  +   Q+    G     +LRI+R G+ ++E A  +L G+   +W++
Sbjct: 402  SLMPIMDMKIANLFEEETPQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTV 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S  D FD ++VVSF++ T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 462  KKSVTDEFDAYIVVSFLNATLVLSIG--ETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVY 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
               +R + S  R   NEWK+P   ++    +N  QV++   GG L+Y E+   G L E++
Sbjct: 520  PNGIRHIRSLVR--INEWKTPGKKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
              ++  +++CL I P+ E    S+  AVG + D ++RI SL P+  +++++ + +     
Sbjct: 578  KREMSGDVACLAIGPVPEGRQRSRFLAVGSY-DNTIRILSLDPNDCMHILSVQMVASP-- 634

Query: 268  PRSVLL------------CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+LL              +    +L   L +G LL   ++M TG+L+  +   LG + 
Sbjct: 635  PESLLLLEVQASTGGEDGAVYPASVFLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRA 694

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L   S +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 695  PKLFATSVRGRQALLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVA 754

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQ---------------------SRT 412
               L + TI+ + +  +  SI L   PR+ I H ++                     SR+
Sbjct: 755  GEALRVFTIERLGETFNQTSIQLRYTPRKFILHPKRKFLVLIETDQGTFTTEEREHMSRS 814

Query: 413  FA-----ICSLKNQSCAEESEM----------------HFVRLLDDQTFEFISTYPLDTF 451
             A     +  + NQ  +EE  M                  +R+LD +         L   
Sbjct: 815  AAAQDNGMMEIDNQEKSEEEPMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQEN 874

Query: 452  EYGCSILSCSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIA 503
            E   SI   +F D+ N+     VGTA  L  E  P +  +  FI     VEDG+ L+L+ 
Sbjct: 875  EAAFSICCVNFHDNKNLGTVLAVGTAKDL--EWWPKRRSMGGFIHIYRFVEDGRSLELVH 932

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTR 562
            +    G   +L  F G+LLA I Q +++Y     D G R+L  +C +      +  + + 
Sbjct: 933  KTPIDGVPTALCQFQGRLLAGIGQILRIY-----DLGKRKLLRKCENKNFPNTITSIHSY 987

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            GD I VGD+ +S   + Y+ +E  +   A D +  W++A   +D D     +   NLF V
Sbjct: 988  GDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFV 1047

Query: 623  RKNSE-----------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            R   +           G    E+GRL       E + ++H+GE V   +  SL+      
Sbjct: 1048 RLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTCMQKASLI------ 1101

Query: 665  DVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
              G   +VI+GTV G +G +      E   F   L+ ++R+    + G +H  +RS    
Sbjct: 1102 -PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEMHMRQEHPPLCGRDHMAFRS---- 1156

Query: 724  KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                  K+ +DGDL E +  L      +I++ ++ +  E+ K++E++
Sbjct: 1157 -AYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRTPGEVMKKLEDI 1202


>gi|302773427|ref|XP_002970131.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
 gi|300162642|gb|EFJ29255.1| hypothetical protein SELMODRAFT_171237 [Selaginella moellendorffii]
          Length = 1207

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 211/827 (25%), Positives = 371/827 (44%), Gaps = 115/827 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  + +L  +   Q+    G     +LRI+R G+ ++E A  +L G+   +W++
Sbjct: 402  SLMPIMDMKIANLFEEETPQIFVACGRGPRSTLRILRPGLAVSEMAVSQLPGVPSAVWTV 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S  D FD ++VVSF++ T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 462  KKSVTDEFDAYIVVSFLNATLVLSIG--ETVEEVSDSGFLDTTPSLQVSLLGDDSLMQVY 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
               +R + S  R   NEWK+P   ++    +N  QV++   GG L+Y E+   G L E++
Sbjct: 520  PNGIRHIRSLVR--INEWKTPGKKTIVKVGSNRMQVVIGLSGGELIYFEMDPTGQLMEIE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
              ++  +++CL I P+ E    S+  AVG + D ++RI SL P+  +++++ + +     
Sbjct: 578  KREMSGDVACLAIGPVPEGRQRSRFLAVGSY-DNTIRILSLDPNDCMHILSVQMVASP-- 634

Query: 268  PRSVLL------------CAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+LL              +    +L   L +G LL   ++M TG+L+  +   LG + 
Sbjct: 635  PESLLLLEVQASTGGEDGAVYPASVFLNAGLQNGVLLRTEVDMVTGQLSGTRTRFLGLRA 694

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L   S +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 695  PKLFATSVRGRQALLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVA 754

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQ---------------------SRT 412
               L + TI+ + +  +  SI L   PR+ I H ++                     SR+
Sbjct: 755  GEALRVFTIERLGETFNQTSIQLRYTPRKFILHPKRKFLVLIETDQGTFTTEEREHMSRS 814

Query: 413  FA-----ICSLKNQSCAEESEM----------------HFVRLLDDQTFEFISTYPLDTF 451
             A     +  + NQ  +EE  M                  +R+LD +         L   
Sbjct: 815  AAAQDNGMMEIDNQEKSEEEPMPDEQYGYPKTDSRRWVSCIRVLDPKAAATTCLLELQEN 874

Query: 452  EYGCSILSCSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIA 503
            E   SI   +F D+ N+     VGTA  L  E  P +  +  FI     VEDG+ L+L+ 
Sbjct: 875  EAAFSICCVNFHDNKNLGTVLAVGTAKDL--EWWPKRRSMGGFIHIYRFVEDGRSLELVH 932

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTR 562
            +    G   +L  F G+LLA I Q +++Y     D G R+L  +C +      +  + + 
Sbjct: 933  KTPIDGVPTALCQFQGRLLAGIGQILRIY-----DLGKRKLLRKCENKNFPNTITSIHSY 987

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            GD I VGD+ +S   + Y+ +E  +   A D +  W++A   +D D     +   NLF V
Sbjct: 988  GDRIYVGDIQESFHYVKYRRDENQLYAFADDSSPRWLTASLHIDFDTMAAGDKFGNLFFV 1047

Query: 623  RKNSE-----------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            R   +           G    E+GRL       E + ++H+GE V   +  SL+      
Sbjct: 1048 RLPQDLSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTCMQKASLI------ 1101

Query: 665  DVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
              G   +VI+GTV G +G +      E   F   L+ ++R+    + G +H  +RS    
Sbjct: 1102 -PGGGESVIYGTVMGSVGALLPFSSREDVDFFSHLEMHMRQEHPPLCGRDHMAFRS---- 1156

Query: 724  KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                  K+ +DGDL E +  L      +I++ ++ +  E+ K++E++
Sbjct: 1157 -AYFPVKDVIDGDLCEQYPTLPPDLQRKIAEELDRTPGEVMKKLEDI 1202


>gi|345563727|gb|EGX46712.1| hypothetical protein AOL_s00097g460 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1308

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 203/806 (25%), Positives = 365/806 (45%), Gaps = 74/806 (9%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   ++  ++D  + +L      Q+ T  GA    S R +++G+ ++E  S EL G
Sbjct: 511  LALMESVDSMNSLLDCQIANLTNDDAPQIYTICGANARSSFRTLKHGLEVSEIVSSELPG 570

Query: 85   IK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
                +W+ + ++ D +D ++V+SF + T +L++   + +EE    GF S   TL      
Sbjct: 571  GPVAVWTTKLASQDEYDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 628

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  A+ N+ QV +A   G +VY E+  
Sbjct: 629  EDGLLQVHPKGIRHIRADRRV--NEWPAPQHRSIVAASTNSRQVAIALSSGEIVYFELDS 686

Query: 203  DGILTEVK-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E +   ++   ++CL +  + E    S   AVG   D +VRI SL PD  L +K 
Sbjct: 687  DGQLAEYEDKKEMSGTVTCLSLGDVPEGKMRSSFLAVGC-DDSTVRILSLDPDSTLESKS 745

Query: 261  HLGGEIIPRSVLLCAFEGIS---------YLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
                   P ++ + +    +         +L   L  G  L  +L+  TGELTD +   L
Sbjct: 746  VQALTSAPTALRIMSMPDSAGGDSQRSTLFLHIGLYSGVYLRTVLDTITGELTDTRTRFL 805

Query: 312  GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK-KLLYSNVNLKEVSHMCPFNSAAFPDS 370
            G QP+ L + S+  TT + A S +P + Y++   + L + ++ + +++ C F+S   P+ 
Sbjct: 806  GPQPVKLFSVSAAGTTAILALSSKPWLGYTNGSGQYLLTPLSYQSLTYGCTFSSEQCPEG 865

Query: 371  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES-- 427
            +   +   L I T++ I + L   SIPL   PR++     +  F + S    + + ES  
Sbjct: 866  MVGIQGNNLRIFTVEKISENLQQESIPLSYTPRKMAKHPTAPYFYVVSSDADTLSPESRN 925

Query: 428  ------------------------EMHF---VRLLDDQTFEFISTYPLDTFEYGCSILSC 460
                                    E H+   V ++D    E      L   E   SI   
Sbjct: 926  NLIAKAQNGDSTELPPSEFGYPRCEGHWASCVEVVDPINKEVTHKIDLGENEAALSIAVV 985

Query: 461  SFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNA 516
             FS  D   +  VGTA  ++      + G   V+ + DG   +Q I + + + A  +  A
Sbjct: 986  PFSSQDDEHFLVVGTAKDLVLNPRSSSCGYAHVYRLSDGGKTIQFIHKTKLEYAPLAFAA 1045

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F+G+LLA I Q +++Y   ++    R+ Q+    +   L   + T+ + I+V D+ +S++
Sbjct: 1046 FHGRLLAGIGQDLRIYDLGMKQ-LLRKTQATVAPN---LITGLTTQNNRIIVSDIQESVT 1101

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK +E  +   A D    W +   +LD +   G +   NL+ VR   K SE A ++ 
Sbjct: 1102 YVVYKQQENKLIPFADDMVPRWTTCTALLDYESVAGGDKFGNLWVVRAPPKASEEADEDP 1161

Query: 634  RGRLEVVGEYHLGEFVNRFRHGS--LVMRLPDS------DVGQIPTVIFGTVNGVIGVIA 685
                 +  + +L    NR    S      +P S        G    V++  + G IG++ 
Sbjct: 1162 SSGYLLHEKSYLQGAPNRVNLMSHFFTQDVPTSIQKVNLVAGGRDCVVWSGLQGTIGIMV 1221

Query: 686  S-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
              +  E   F + L+ ++R     + G +H  +RS+      V  K  +DGDL E F  L
Sbjct: 1222 PFISREDVDFFQTLEQHMRTEDAPLAGRDHLIYRSY-----YVPVKGVIDGDLCERFALL 1276

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   I+  ++ S+ E+ ++V ++
Sbjct: 1277 PYDKKQMIAAELDRSIREVERKVADM 1302


>gi|440300137|gb|ELP92626.1| DNA damage-binding protein, putative [Entamoeba invadens IP1]
          Length = 1086

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 181/769 (23%), Positives = 368/769 (47%), Gaps = 29/769 (3%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            +EVLE + N GPI+D   +  E   +  ++ CS  Y  G+L+++R+G+G+N    VE +G
Sbjct: 325  MEVLETFENRGPILDMITLHDEISKKDDLLICSNTYHQGTLKLLRSGVGVNILGEVEYRG 384

Query: 85   IKGMWSLRSS----TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCH 140
            I+ MW    +    +DD  + +++        +     + +++  EI    +    +   
Sbjct: 385  IEKMWKCFENAGDMSDDYKEMYVIEGAFGSNFVHIEGRKGDVQIVEIANSVTVKGRIVGV 444

Query: 141  DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
                 +LV VT+G + +       +  ++ S    +  V+       ++ +G   +   +
Sbjct: 445  GDFDGKLVVVTNGGISIARVHDTIVEEQFVSTEEITHCVSEGKD---VVYSGRNTVKLFD 501

Query: 201  IGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 260
                +++++K  + E EIS +    +    +  +   VG W    + I  + D   +   
Sbjct: 502  AEKCVMSDIK--RYEEEISSIGCYTVSSENTRERYIGVGRWEHKEIEI--IDDQGDVLDR 557

Query: 261  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR-----KKVSLGTQP 315
               G+++ +S+          ++  LGDG ++   +  K     +      K + +G   
Sbjct: 558  VYIGDVVSKSIKFVGTPSTLKVIIGLGDGRVVVSNIRKKNSTQMEEEHKVGKVIEVGMGG 617

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            +++   +     +     +RPT++   + K+   +VN+ E       +    P+S+ IA 
Sbjct: 618  VSIDEMAIDGKMYEICVCERPTLMSLDDDKIKMMSVNIGESVGFLGVHITGIPNSVLIAS 677

Query: 376  EGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFVRL 434
            +  L IG+I++++ ++ +S+ LG    R+      R+  + S +  ++ + ++E+HF+ L
Sbjct: 678  KESLMIGSIEEVKAINTKSLELGVFVSRVVVSSDGRSGVLLSSEIEETRSGKNEVHFINL 737

Query: 435  LDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV 494
            +D +  E I    LD  E+G +I      +     Y VGTAY    E EP++GR ++F +
Sbjct: 738  IDLRKMEIIDKVRLDKDEHGMAIDVKEIEEKE--LYIVGTAYAKLGEVEPSRGRFIIFEI 795

Query: 495  EDGKLQLIAEKETKGAVYSLNAFN---GKLLAAINQK----IQLYKWMLRDDGTRELQSE 547
             + K+  ++ +   GAVYS+  F    G  +AA  QK     Q+ + ++       ++ +
Sbjct: 796  HEEKIIEVSNRYVDGAVYSVKRFENDVGNYIAATIQKKVVVYQIERKIVDGKFAVTIEEK 855

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIY--KHEEGAIEERARDYNANWMSAVEIL 605
             G +  ++ L+V+T G  I+VGDLMKSIS+  +  K    A+ E  RD+ A++ +AVE +
Sbjct: 856  GGANVKLIGLFVKTLGHEILVGDLMKSISVFKFDEKATRNAVVETCRDFYASYTTAVEFM 915

Query: 606  DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
            D+  ++ +++  NL    +N+    + E+ +L+     H+GE +N    GS+ +      
Sbjct: 916  DEHCFMSSDSQGNLLVFTENTTTTNENEKFKLQNEAHIHVGECINVMCKGSIAVMNNAMW 975

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL-NHEQWRSFNNEK 724
              Q   ++FG + G IG I  +  E Y  L  L++ + + +KGV    +  QW+   ++ 
Sbjct: 976  ETQKKCMLFGGICGSIGGITEINLETYKKLFALESEMLREMKGVIECESFGQWKMVFDDW 1035

Query: 725  KTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            K ++A+N +DG+++E FLDL +     I++ +  + EEL   +E +  +
Sbjct: 1036 KRMEAQNVIDGNVVELFLDLPKESQKHIAEKIGYAGEELVTVLESMNTI 1084


>gi|308805058|ref|XP_003079841.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
 gi|116058298|emb|CAL53487.1| spliceosomal-like protein (ISS) [Ostreococcus tauri]
          Length = 1166

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 203/816 (24%), Positives = 352/816 (43%), Gaps = 124/816 (15%)

Query: 28   LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IK 86
            +++  +L PI+D    +L  +   Q+ T  G     SLRI+R GIG+NE A   L G   
Sbjct: 397  IDKIDSLCPILDMQAHNLTEEDTPQLYTLCGTGARSSLRILRQGIGMNELAMSSLPGQPN 456

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
             +++++  + D +D ++VVSF++ T +LA+   D + E    G    T TL       + 
Sbjct: 457  AIFTVKKKSSDQYDGYIVVSFLNATLVLAIG--DTVTEVSDSGILGTTMTLQVCLMNDDS 514

Query: 147  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GI 205
            L+QV +G +R + +  R   NEW++P    ++  T N+ QV++A  GG ++Y E+   G 
Sbjct: 515  LLQVHAGGLRHIKADKR--INEWRTPGRKQISKCTCNSKQVVIALTGGEVIYFELDSAGQ 572

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHL 262
            L EV+  +   +I+C+DI P+ E    S+  A+G + D +VR+ SL     L  +  + L
Sbjct: 573  LIEVEKLETNGDIACVDIAPVPEGALRSRFLAMGSY-DGTVRVMSLNSDDCLQTLAVQAL 631

Query: 263  GGEIIPRSVLLC------AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
             G   P S+L+       + +G   L   + +G L+   L+  +G+L+D +   LGT+  
Sbjct: 632  KGST-PSSLLILQTAGTESLQGSLLLNVGMANGVLMRATLDQVSGQLSDMRVRFLGTRAP 690

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
             L   S +  + + A S RP + YS     + S ++   +  +C F+S A P+ +     
Sbjct: 691  KLVRTSVRGESALVALSSRPWLGYSEKGTFVLSPISYVALEEVCSFSSEACPEGVVAISN 750

Query: 377  GELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI-----CSLK----------- 419
              L I +++ + +  H  +I L   PR +     ++  A+     CS+            
Sbjct: 751  QTLRIASVERLGENFHQTTIKLRYTPRAMSANPDTKMVALIESDQCSVPVGERESPEATS 810

Query: 420  ----NQSCAEESEMHF-------------------VRLLDDQTFEFISTYPLDTFEYGCS 456
                +++  +E E++                    VR++D +  +      L   E   S
Sbjct: 811  ADEASEANGDEDELNMLPVEQYGAPKSSPGTWAACVRIIDPKDAKSQYVLELGKNESAIS 870

Query: 457  ILSCSFSDDSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYS 513
            I     +  + +   VGTA  L   P   +     +  +  +   L L+    T+G V +
Sbjct: 871  ICHVYLTGPNELLLAVGTAQNLTFAPRNCDGGFIHLYRYGTDSKTLSLVHSTPTEGPVGA 930

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L                                 CG+ GH+LA       D I VGD+ +
Sbjct: 931  L---------------------------------CGYRGHLLAXXXXXXXDRIYVGDVQE 957

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 623
            SI  + YK +EG++   A D    +M+A   LD D   GA+   N+F  R          
Sbjct: 958  SIHFVKYKADEGSMYIFADDTKPAYMTAALPLDFDTLAGADKFGNIFVNRLPKDISEDMD 1017

Query: 624  ------KN--SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
                  KN  S+G  +    + E      +GE V     G+L         G I  +++G
Sbjct: 1018 EDPTGGKNIYSQGVLNGAPNKSETCARTFIGETVCALTKGAL-------QPGGIDIIMYG 1070

Query: 676  TVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T  G IG +        + F   L+ ++R+    + G +H  +RS+         KN +D
Sbjct: 1071 TFLGGIGALVPFQTRSEIDFFITLEMHMRQEASSIVGRDHMAFRSY-----YAPVKNVID 1125

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E F  L+      I++ M+ +  E+ KR+E++
Sbjct: 1126 GDLCEQFGALAPEVQRRIAEDMDRTPGEILKRLEQI 1161


>gi|389740093|gb|EIM81285.1| hypothetical protein STEHIDRAFT_86633 [Stereum hirsutum FP-91666 SS1]
          Length = 1213

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 200/815 (24%), Positives = 354/815 (43%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L P++D  V++L       Q+ T  G     + R +R+G+ + E  S +L GI   +W+
Sbjct: 417  SLAPVIDSKVMNLLPNSDTPQIFTACGRGARSTFRTLRHGLEVEETVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             ++  D P+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKTREDAPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADRRV--NEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSIGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S L  A          +   ++   L +G LL  +L+   G+LTD +   LGT+P+ L 
Sbjct: 652  PSALCIADMLDAGINKSQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVRLI 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                ++   + A S R  + Y+    + ++ +    +     F++   P+ L       L
Sbjct: 712  RVQIQHQPAILALSSRTWLNYTHQNLMHFTPLIFDNLDFAWSFSAELCPEGLIGITGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI-----------------CSLKNQ 421
             I  +  +  KL   SIPL   PR+      +  F I                   L++Q
Sbjct: 772  RIFQMPKLGTKLKQDSIPLSYTPRKFASHPSNSYFYIIEADHRVTGPDATAKKVAELRSQ 831

Query: 422  SCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                + EM                     +R++D    + ++  P+D  E   S+    F
Sbjct: 832  GKMVDDEMLELPAEVFGRSKAPAGTWASCIRIVDPAEGKSVAEIPIDNNEAAFSLAIVPF 891

Query: 463  SDDSNVYY-CVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S  +N Y+  VGTA   ++ P        R   F+ +   L+L+ + ET     SL AF 
Sbjct: 892  SVRNNEYHLVVGTAQDTFLAPRSCTSGFLRTYKFVDDGAGLELLHKTETDDIPMSLLAFQ 951

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G+L+A I + +++Y    K +LR   ++   S          + + T+G  I+VGD+ +S
Sbjct: 952  GRLVAGIGKALRIYDIGKKKLLRKAESKTFASAI--------ISLNTQGSRIIVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATD 631
            I+  +YK  E  +   A D  A W++   ++D       +   N+F  R   K S+   D
Sbjct: 1004 IAYAVYKAPENKLLVFADDTQARWVTCSTMVDYTTVAAGDRFGNIFINRLDSKVSDQVDD 1063

Query: 632  EERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
            +  G               +  ++  +H+G+ V      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGILMGAPHKTAMLAHFHVGDLVTSIHKVSLV-------AGGREVLLYTG 1116

Query: 677  VNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IG++  L   E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1117 LHGTIGMLVPLVSKEDVDFISTLEQHIRTEQTSLVGRDHLAWRGY-----YVPVKAVVDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E+F  L   +   I+  ++ +V E+ K++++L
Sbjct: 1172 DLCETFARLPAAKQSMIAGELDRTVSEVLKKLDQL 1206


>gi|380490733|emb|CCF35810.1| pre-mRNA-splicing factor rse-1 [Colletotrichum higginsianum]
          Length = 1212

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 206/813 (25%), Positives = 362/813 (44%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG
Sbjct: 534  GLIQVHPKGIRHIRHGHV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPESTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+
Sbjct: 650  ALTAPPSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + YS    +  L + +N  ++  +  F+S    + +   
Sbjct: 710  RLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWNFSSEQCEEGVVGI 769

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  I+++   +  +SIPL   PRR+    +   F      N +   +     + 
Sbjct: 770  QGQSLRIFAIENLGDTITQKSIPLSYTPRRLLKHPEHPMFYTIEADNNTLPPDLRAKLIA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     R+L    F +                       + T  LD  E   S    
Sbjct: 830  EPGVVNGDARILPPDEFGYPKGKGRWASCISVIDPLSEEQRVLQTVDLDNNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNA 516
            SF S D+  +  VGT   ++    + ++G I V+   EDG +L+ I + + +    +L  
Sbjct: 890  SFASQDNESFLIVGTGKDMIVNPRQFSEGYIHVYRFSEDGHELEFIHKTKVEEPPSALLG 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G+LLA I Q +++Y   LR    R+ Q++       L + + T+G  I+VGD+   I+
Sbjct: 950  FQGRLLAGIGQTLRIYDLGLR-QMLRKAQADVAPQ---LIVSLSTQGSRIIVGDVQHGIT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK     +     D  + W++   ++D +  +G +   N+F VR   K S+ A +E 
Sbjct: 1006 YVVYKPTTNKLIPFVDDTISRWVTCTTMVDYESVVGGDKFGNIFLVRCPEKASQEADEES 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL ++G  +  +        SLV       VG    +++  +N
Sbjct: 1066 GGLHLLNTRDYLHGTPHRLSLLGHSYTQDVPTSITKTSLV-------VGGQDVLLWSGIN 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ ++R     + G +H  +RS+      V  K  +DGDL
Sbjct: 1119 GTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRSY-----YVPVKGVIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYTLLPSEKKQMIAGELDRSVREIERKISDI 1206


>gi|336371417|gb|EGN99756.1| hypothetical protein SERLA73DRAFT_88390 [Serpula lacrymans var.
            lacrymans S7.3]
 gi|336384183|gb|EGO25331.1| hypothetical protein SERLADRAFT_355643 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1216

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 198/811 (24%), Positives = 356/811 (43%), Gaps = 91/811 (11%)

Query: 33   NLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++ L      Q+    G     SLR++R+G+ + E  S EL GI   +W+
Sbjct: 417  SLDPILDSKVMNILPNSDTPQIFAACGRGARSSLRMLRHGLDVEESVSSELPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +   DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKRKEDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  A  N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPQGIRHVLADRRV--NEWRVPQGKTIVSAATNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L +  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSVGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDASINKTQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                     + A S R  + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 712  RVQIHGNPAILALSSRSWLNYTHQNLMHFTPLIFENLDYAWSFSAELSPEGLIGIAGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES------EMH-- 430
             I  I  +  KL   +IPL   PR+      +R F +    ++   E++      EM   
Sbjct: 772  RIFQIPKLGTKLKQDTIPLSYTPRKFISHPTNRYFYLIEGDHRVLGEDAAAKRLDEMRQR 831

Query: 431  ----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                                         +R++D    + +S   LD+ E   S+    F
Sbjct: 832  GKMVDDNMLDLPPEVFGRPKAPAGTWASAIRIIDPVEAKTLSMITLDSNECAFSLAIVPF 891

Query: 463  SDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S   N ++  VGTA   ++ P        R   F  +   L+L+ + ET     +L AF 
Sbjct: 892  SARGNELHLVVGTAADTFLAPRSCSSGFLRTYKFTEDGTGLELLHKTETDDVPLALMAFQ 951

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            G+L+A + + +++Y  + +    R+++++         + + T+G  I+VGD+ +SIS +
Sbjct: 952  GRLVAGVGKALRIYD-IGKKKLLRKVENKARATFSTAIVTLNTQGSRIIVGDMQESISFV 1010

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG 635
             YK  E  +   A D    W++A  ++D       +   N+F  R   K SE   D+  G
Sbjct: 1011 AYKAPENRLLVFADDNQPRWITATTMVDYTTIAAGDRFGNIFVNRLDPKVSEQVDDDPTG 1070

Query: 636  ---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
                           + +++  +H+G+ V      SLV        G    +++  ++G 
Sbjct: 1071 AGILHEKGLLMGAPHKTKMLAHFHIGDLVTSINKVSLV-------AGGREVLLYTGLHGT 1123

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG++   +  E   F+  L+ ++R     + G +   WR +    K+V     +DGDL E
Sbjct: 1124 IGILVPFVSKEDVDFISTLEQHMRTEQGSLVGRDQLSWRGYYTPVKSV-----VDGDLCE 1178

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            ++  L  T+   I+  ++ +V E+ K++E+L
Sbjct: 1179 TYARLPGTKQSAIAGELDRTVGEVLKKLEQL 1209


>gi|169848339|ref|XP_001830877.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
 gi|116508046|gb|EAU90941.1| pre-mRNA-splicing factor RSE1 [Coprinopsis cinerea okayama7#130]
          Length = 1213

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 193/812 (23%), Positives = 360/812 (44%), Gaps = 96/812 (11%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++L       Q+    G     +LR +R+G+ + E  S EL GI   +W+
Sbjct: 417  SLDPILDSKVLNLLPNSDAPQIFAACGRGARSTLRTLRHGLEVEESVSSELPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             + + +DP+D+++++SF++ T +L++   + +EE +  GF S + T+       + L+QV
Sbjct: 477  TKKTEEDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSSPTIAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADRRV--NEWRVPQGKTIVTATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 267
            +  + +   +  L I  + E    +   AVG   D +VRI SL P+  L T         
Sbjct: 593  QDRKAMGSTVLALSIGEVPEGRQRTPYLAVGC-EDQTVRIISLDPETTLETLSLQALTAP 651

Query: 268  PRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            P S+ +      S        ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSSICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLI 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                     + A S R  + Y+    + ++ +    + +   F++   P+ L       L
Sbjct: 712  RVPVHKNPAILALSSRSWINYTHQNMMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGNVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE---------- 428
             I TI  +  KL   ++PL   PR++    ++  F +    ++  +EE+           
Sbjct: 772  RIFTIPKLGSKLKQDTLPLSYTPRKLITHPENNYFYLIESDHRVYSEEATKAKLDELQKK 831

Query: 429  --------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                                         +R++D    + ++ +PLD  E   SI    F
Sbjct: 832  GKKIDEEIISLPPSEFGRPKAPAGTWASNIRIIDPVENKTVAVFPLDNNEAAFSIAIVPF 891

Query: 463  S-DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S  +  ++  VGTA    V P   E    R   F      L+L+ + ET     +L AF 
Sbjct: 892  SARNGELHLVVGTAKDTTVSPRTCESGFLRTYKFTENGTGLELLHKTETDDVPMALLAFQ 951

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISL 577
            G+L A + + +++Y     D G ++L  +  +     A+  + T+G  I+VGD+ +S+  
Sbjct: 952  GRLAAGVGKALRIY-----DIGKKKLLRKVENKSFTTAIVTLTTQGSRILVGDMQESVQY 1006

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 634
            ++YK  E  +   A D    W++A+ ++D +  +  +   N+F  R   K S+   ++  
Sbjct: 1007 VVYKQPENRLLTFADDTQPRWVTAITMVDYNTIVAGDRFGNIFVNRLDSKVSDQVDEDPT 1066

Query: 635  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
            G               + +++  +H+G+ +      SLV        G    +++  ++G
Sbjct: 1067 GAGILHEKPILMGAPHKTKMIAHFHVGDIITSLHKVSLV-------AGGREVIVYTGLHG 1119

Query: 680  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++   +  E   F+  L+ ++R     + G +   +R +      V  K  +DGDL 
Sbjct: 1120 TIGILMPFISKEDVDFISTLEQHMRTEQPSLVGRDQLAYRGY-----YVPVKAVVDGDLC 1174

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E++  L  ++   I+  ++ +V E+ K++E++
Sbjct: 1175 ETYAHLPASKQSSIANELDRTVGEVLKKLEQM 1206


>gi|301110252|ref|XP_002904206.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
 gi|262096332|gb|EEY54384.1| pre-mRNA-splicing factor RSE1 [Phytophthora infestans T30-4]
          Length = 1197

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 206/824 (25%), Positives = 344/824 (41%), Gaps = 119/824 (14%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSS 94
            P+    V DL  +   Q+    G     SLR++R+G+ I E A+  L G+ K +W L+ S
Sbjct: 399  PVTQLLVDDLANEQTPQMYALCGNNNRSSLRVLRHGLPITEMAASALPGVAKAVWCLKES 458

Query: 95   TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
              DP+D ++VVSF  E   L + + + +EE    GF     +L       +  +Q+ +  
Sbjct: 459  YADPYDKYIVVSF--EDATLVLEVGETVEEVAQSGFLRDHGSLLVALLEDDSKLQIHTNG 516

Query: 155  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQ 213
            +R V     +   EWK+P    +    AN+ QV+++  GG ++Y E+G  G L E     
Sbjct: 517  IRHVPKF--QPVTEWKAPGKKVIEHCAANSRQVVISLAGGEIIYFELGQSGELAEKGKLD 574

Query: 214  LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVL 272
            L +E+  LD+  + E     Q  AVG W D +VRI SL P+     K  L     P ++ 
Sbjct: 575  LGFEVCSLDLGEVPEGRQRFQFMAVGSW-DNTVRILSLDPNELFRQKSTLALTSHPHTLC 633

Query: 273  LCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
            L   +               +L   L +G L   L++  T  L D +   LGT P+ L  
Sbjct: 634  LAQLQNEPSTPDSEHSSQALFLSIGLDNGVLQQSLIDPITATLADSRSRFLGTNPVKLFR 693

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL-AIAKEGEL 379
             + +    + A S R  + Y    +   + ++ + +S+   FNS   P  + A+  EG +
Sbjct: 694  VAVEGKRSILALSSRAWISYFHQTRRHLTPLSCELLSYASSFNSEQCPGGIVALTNEG-M 752

Query: 380  TIGTIDDI------QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH--- 430
             I T+D +      QK ++R  P     + + H    R   I S  N+  A     H   
Sbjct: 753  KILTVDQLGDTFNQQKCNLRYTPR----KAVVHSPSRRLVVIESDHNEYGAAYKRQHGLQ 808

Query: 431  --------------------------------------FVRLLDDQTFEFISTYPLDTFE 452
                                                   VR++D  + + +    LD  E
Sbjct: 809  IPDIRSANDLEDEAEDEINDALLFPRGPLPAEKDKWASCVRIIDPASCQTVVCEELDVDE 868

Query: 453  YGCSILSCSFSD-DSNVYYCVGTA--YVLPEENEPTKGRILVF-IVEDGKLQLIAEKETK 508
               SI +C F D     +  VGT     L  +  P  G + V+ +VE  +L L+   E  
Sbjct: 869  RARSIAACVFHDRGGEAFIIVGTVKKMQLHPQKAPAGGYLRVYRVVEGMQLVLVHTTEID 928

Query: 509  GAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGD 564
               +++  F G+LL ++ + +++Y    K MLR    R   S        + + ++  GD
Sbjct: 929  DIPHAMCEFQGRLLVSVGRALRIYDLGKKKMLRKCENRNFPS--------ILVELKAAGD 980

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
             I   D+ +S   + YK +E  +   A D    ++++  +LD D   GA+   N+F  R 
Sbjct: 981  RIYASDMHESFHFVKYKKDENQLVIFADDCVPRFITSSVLLDYDTLCGADKFGNVFVSRL 1040

Query: 625  NSE-----------------GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
             SE                 G  +    +LE V ++H+G+ V      SLV        G
Sbjct: 1041 PSEVSDEIDNPTGNRILWDSGLLNGAPNKLEQVAQFHVGDVVTSMVRSSLVP-------G 1093

Query: 668  QIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 726
                VI+ T+ G IG +I     E   F   L+  +R+    + G +H  +RS+      
Sbjct: 1094 GTEAVIYATIMGRIGALIPFTSREDVDFYTHLEMYMRQEQPPLCGRDHLSYRSY-----Y 1148

Query: 727  VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +  KN  DGDL E F  LS  +   +++ ++ +  E+ K++E++
Sbjct: 1149 IPVKNITDGDLCEQFSSLSVEKQASVAEDLDRTPAEVLKKLEDI 1192


>gi|449459948|ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
 gi|449513493|ref|XP_004164340.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 210/837 (25%), Positives = 370/837 (44%), Gaps = 127/837 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  +++L  +   Q+ T  G     SLRI+R G+ I+E A  EL G+   +W++
Sbjct: 401  SLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTV 460

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + +D FD ++VVSF + T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 461  KKNINDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 519  PNGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVE 576

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
              ++  +++CLDI P+ E    S+  AVG + D ++RI SL PD  + +++ + +     
Sbjct: 577  KHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCMQILSVQSVSAA-- 633

Query: 268  PRSVL----LCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+L    L +  G          +L  AL  G L   +++M TG+L+D +   LG + 
Sbjct: 634  PESLLFLEVLASVGGEDGADHPASLFLNAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRA 693

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L +   +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 694  PKLFSVVLRGRRAILCLSSRPWLGYIHQGHFLLTPLSYETLEYASSFSSDQCAEGVVAVA 753

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESEM---- 429
               L + TI+ + +  +   IPL   PR+   Q + +   +  S +    AEE E     
Sbjct: 754  GNFLRVFTIERLGETFNETVIPLRYTPRKFVLQPRRKLLVVIESDQGAFTAEEREAAKKE 813

Query: 430  ----------------------------------HF-------------VRLLDDQTFEF 442
                                              H+             +R+LD ++   
Sbjct: 814  CFEAAGAGENGNGTMDQMENGGDDEDKDDPLSDEHYGYPKAESEKWVSCIRVLDPRSATT 873

Query: 443  ISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVEDGK 498
                 L   E   S+ + +F D +      VGTA  L    +     G I ++  +EDGK
Sbjct: 874  TCLLELQDNEAAFSVCTVNFHDKEYGTLLAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGK 933

Query: 499  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
             L+L+ + + +G   +L  F G+LLA +   ++LY     D G R L  +C +      +
Sbjct: 934  SLELLHKTQVEGVPLALAQFQGRLLAGLGSVLRLY-----DLGKRRLLRKCENKLFPNTI 988

Query: 558  Y-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
              +QT  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+  
Sbjct: 989  VSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHVDFDTMAGADKF 1048

Query: 617  FNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
             N++ VR                  K  +G  +    ++E + ++H+G+ V   +  SL+
Sbjct: 1049 GNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIIQFHIGDVVTSLQKASLI 1108

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                    G    +++GTV G +G + A    +   F   L+ ++R+    + G +H  +
Sbjct: 1109 -------PGGGECILYGTVMGSLGALHAFTSRDDVDFFSHLEMHMRQEHPPLCGRDHMGY 1161

Query: 718  RSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            RS          K+ +DGDL E F    LD+ R   DE+ +T      E+ K++EE+
Sbjct: 1162 RS-----AYFPVKDVIDGDLCEQFPSLPLDMQRKIADELDRTPG----EILKKLEEV 1209


>gi|145348011|ref|XP_001418451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578680|gb|ABO96744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1196

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 205/816 (25%), Positives = 356/816 (43%), Gaps = 104/816 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L P++D    +L  +   Q+ T  G     SLRI+R GI +NE A   L G    ++++
Sbjct: 402  SLCPVLDMQAHNLTEEEMPQLYTLCGTGARSSLRILRQGIAMNELAMSPLPGQPNAIFTV 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S+ + +D++++VSF++ T +L++   D + E    G    T TL         L+Q+ 
Sbjct: 462  KKSSSEEYDSYIIVSFLNATLVLSIG--DTVSEVNDSGILGTTTTLQACLMSDESLLQIH 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
             G +R + +  R   NEW++P    ++  T N+ QV++A  GG ++Y E+   G L EV+
Sbjct: 520  PGGLRHIKADKR--INEWRTPGRKQISKCTCNSKQVVIALTGGEVIYFELDSAGQLIEVE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
              +   +I+CLDI P+ E    ++  A+G + D +VR+ SL PD  L  +  + L G   
Sbjct: 578  KLETSGDIACLDIGPVPEGALRNRFLAMGSY-DGTVRVMSLNPDDCLQTLAVQALKGSA- 635

Query: 268  PRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
            P S+L+    G         L   + +G L+   ++  +G+L+D +   LG +   L   
Sbjct: 636  PSSLLVLQTAGTESTQGGLLLNVGMANGVLIRATIDQVSGQLSDMRMRFLGARAPKLVRT 695

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
            S +    + A S RP + YS     + + ++   +  +C FNS   P+ +       L I
Sbjct: 696  SVRGAPALVALSSRPWLGYSEKGTFVLAPISYVPLEEVCSFNSEQCPEGVVAISNQTLRI 755

Query: 382  GTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI-----CSLK---------------- 419
             +I+ + +  +  ++ L   PR +     ++  A+     C++                 
Sbjct: 756  ASIERLGENFNQTTVKLRYTPRAMSANPDTKMVALIESDQCTVPVGEREGPEATPADEAP 815

Query: 420  --NQSCAEESEM-----------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSC 460
              N    EE++M                   VR++D +  +      L   E   S+   
Sbjct: 816  ETNDEDEEEAKMLPVEQFGAPKSSPGTWAACVRIVDPKEAKSTFVLELHKSEAALSLCHV 875

Query: 461  SFSDDSNVYYCVGTAYVLPEENEPTKGRI--LVFIVEDGK-LQLIAEKETKGAVYSLNAF 517
              +  + +   VGTA  L        G    L     DG+ L L+    T G V +L  +
Sbjct: 876  FLTGPNELLLAVGTAVNLTFAPRNCDGGFIHLYRYGNDGRTLNLVHSTPTDGPVGALCGY 935

Query: 518  NGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
             G LLA +N  +++Y    K +LR    R   +       I  L+    GD I VGD+ +
Sbjct: 936  KGHLLAGVNNSLRIYDYGKKKLLRKVENRNFPN------FITTLHAA--GDRIYVGDVQE 987

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 623
            SI  + YK +EG+I   A D    +++A   LD D   GA+   N+F  R          
Sbjct: 988  SIHYVKYKADEGSIYIFADDTKPRYITATLPLDYDTLAGADKFGNIFVNRLPKDVSEDMD 1047

Query: 624  ------KN--SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
                  KN  S+G  +    + E   + ++GE V     G+L         G I  +++G
Sbjct: 1048 DDPTGGKNIYSQGVLNGAPNKSETSAQTYIGETVCALTKGAL-------QPGGIEIIMYG 1100

Query: 676  TVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T  G IG +        + F   L+ ++R+    + G +H  +RS+         KN +D
Sbjct: 1101 TFMGGIGCLLPFSSRSEIEFFTHLEMHMRQEAPSIVGRDHMAFRSY-----YAPVKNVID 1155

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E F  L       I++ M+ +  E+ K++E++
Sbjct: 1156 GDLCEQFGALPADVQRRIAEEMDRTPGEILKKLEQV 1191


>gi|168045572|ref|XP_001775251.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673464|gb|EDQ59987.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1201

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 205/834 (24%), Positives = 369/834 (44%), Gaps = 122/834 (14%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  V ++  +   Q+ +  G     SLRI+R G+ + E A   L G+   +W++
Sbjct: 389  SLMPIMDMKVANIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTV 448

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            +   +D FD ++VVSF++ T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 449  KKHANDEFDAYIVVSFVNATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVH 506

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R + S  R   NEWK+P   ++     N  QV++A  GG L+Y E+   G L E++
Sbjct: 507  PSGIRHIRSDGR--INEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIE 564

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
               +  +++CLDI P+ E    S+  AVG + D ++RI SL PD  + +++ + +     
Sbjct: 565  KRDMTGDVACLDIAPVPEGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP-- 621

Query: 268  PRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+LL   +  +            +L   L +G LL   ++M TG+L+D +   LG + 
Sbjct: 622  PESLLLLEVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRA 681

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L +   +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 682  PKLFSALVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVA 741

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH--- 430
               L + TI+ + +  +   +PL   PR+ I H +Q     + S +     EE E +   
Sbjct: 742  GDALRVFTIERLGETFNQTVVPLRYTPRKFILHPKQKTLIILESDEGAFSTEEREANKKE 801

Query: 431  ----------------------------------------------FVRLLDDQTFEFIS 444
                                                           +R+LD +T     
Sbjct: 802  AVEATGGHENGKADGEDEEMADEESEDPLPDEQYGYPKAEANKWVSCIRVLDPKTSTTTC 861

Query: 445  TYPLDTFEYGCSILSCSFSDDSNV--YYCVGTAYVLP--EENEPTKGRILVF-IVEDGK- 498
               L   E   SI + +F D+  +     VGTA  L      E + G I ++   E+G+ 
Sbjct: 862  LLELQENEAAFSICTVNFHDNKELGTLIAVGTAKDLQFMPRKEASGGFIHIYRFAEEGRV 921

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---IL 555
            L+L+ +    G   +L  F G+LL  + Q +++Y     D G R+L  +C +      I+
Sbjct: 922  LELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTII 976

Query: 556  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            A++  T GD I VGD+ +S   + Y+ +E  +   A D    W++A   +D D   GA+ 
Sbjct: 977  AIH--TYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADK 1034

Query: 616  NFNLFTVRKNSE-----------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSL 657
              N++ +R   +           G    E+GRL       + + ++H+GE V   +  SL
Sbjct: 1035 FGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVDEIIQFHVGEVVTSLQKASL 1094

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G   ++++GTV G +G +      E   F   L+ +LR+    + G +H  
Sbjct: 1095 I-------PGGGESMLYGTVMGSMGALLPFSSREDVDFFSHLEMHLRQENPPLCGRDHMA 1147

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS          K+ +DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1148 FRS-----AYFPVKDVIDGDLCEQYSMLTSELQKKIADDLDRTPGEIVKKLEDI 1196


>gi|255588145|ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223525135|gb|EEF27867.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1214

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 210/853 (24%), Positives = 372/853 (43%), Gaps = 127/853 (14%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP    + V + ++  +L PI+D  + +L  +   Q+ +  G     SLRI+R G+ I+
Sbjct: 386  FQPRGLKNLVRI-DQVESLMPIMDMKIANLFDEETPQIFSLCGRGPRSSLRILRPGLAIS 444

Query: 76   EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A  +L G+   +W+++ + +D FD +++VSF + T +L++   + +EE    GF   T
Sbjct: 445  EMAVSQLPGVPSAVWTVKKNVNDEFDAYIIVSFNNATLVLSIG--ETVEEVNNSGFLDTT 502

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 503  PSLAVSLIGDDSLMQVHPNGIRHIREDGR--INEWRTPGKRTIVKVGSNRVQVVIALSGG 560

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+  ++  +++CLDI P+ E    S+  AVG + D ++RI SL P
Sbjct: 561  ELIYFEVDITGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSF-DNTIRILSLDP 619

Query: 253  D--LNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
            D  + +++ + +     P S+L    +               +L   L  G L   L++M
Sbjct: 620  DDCMQILSVQSVSSP--PESLLFLEVQASVGREDVADHPASLFLNAGLQSGVLFRTLVDM 677

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             TG+L+D +   LG +   L +   +    +   S RP + Y      L + ++ + +  
Sbjct: 678  VTGQLSDSRSRFLGLRAPKLFSILVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEF 737

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC- 416
               F+S    + +       L I TI+ + +  +  +IPL   PR+   Q + +   I  
Sbjct: 738  AASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTPRKFVLQPKKKLLVIVE 797

Query: 417  SLKNQSCAEESE------------------------------------------------ 428
            S +    AEE E                                                
Sbjct: 798  SDQGAYTAEEREAAKKECFEAAGMGENGSANAEQMENGDDEDKDDPLSDEQYGYPKAEAE 857

Query: 429  --MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENE 483
              +  +R+LD +T        L   E   S+ + +F D +      VGTA  L    +  
Sbjct: 858  KWVSCIRVLDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHGTLLAVGTAKGLQFWPKRS 917

Query: 484  PTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
             + G I ++  V+DG+ L+L+ + + +G   +L+ F G+LLA I   ++LY     D G 
Sbjct: 918  LSAGFIHIYKFVDDGRALELLHKTQVEGVPLALSQFQGRLLAGIGPVLRLY-----DLGK 972

Query: 542  RELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 600
            + L  +C +     ++  +QT  D I VGD+ +S     Y+ +E  +   A D    W++
Sbjct: 973  KRLLRKCENKLFPNSIVSIQTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDCVPRWLT 1032

Query: 601  AVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGE 642
            A   +D D   GA+   N++ VR                  K  +G  +    ++E + +
Sbjct: 1033 ASHHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQ 1092

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTN 701
            +H+G+ V      SL+        G    +I+GTV G +G +      +   F   L+ +
Sbjct: 1093 FHIGDVVTSLSKASLI-------PGGGECIIYGTVMGSVGALLPFTSRDDVDFFSHLEMH 1145

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMN 757
            LR+    + G +H  +RS          K+ +DGDL E F    LD  R   DE+ +T  
Sbjct: 1146 LRQDHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPG 1200

Query: 758  VSVEELCKRVEEL 770
                E+ K++EE+
Sbjct: 1201 ----EILKKLEEV 1209


>gi|18410222|ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana]
 gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana]
 gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
 gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana]
          Length = 1214

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 213/844 (25%), Positives = 370/844 (43%), Gaps = 133/844 (15%)

Query: 28   LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IK 86
            +++  +L P++D  V+++  +   Q+ +  G     SLRI+R G+ I E A  +L G   
Sbjct: 396  IDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPS 455

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
             +W+++ +  D FD ++VVSF + T +L++   +++EE    GF   T +L       + 
Sbjct: 456  AVWTVKKNVSDEFDAYIVVSFTNATLVLSIG--EQVEEVNDSGFLDTTPSLAVSLIGDDS 513

Query: 147  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGI 205
            L+QV    +R +    R   NEW++P   S+     N  QV++A  GG L+Y E    G 
Sbjct: 514  LMQVHPNGIRHIREDGR--INEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQ 571

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHL 262
            L EV+  ++  +++CLDI P+ E    S+  AVG + D +VRI SL PD  L +++ + +
Sbjct: 572  LMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSY-DNTVRILSLDPDDCLQILSVQSV 630

Query: 263  GGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
                 P S+L    +               +L   L +G L   +++M TG+L+D +   
Sbjct: 631  SSA--PESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRF 688

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            LG +P  L + S +  + +   S RP + Y        + ++ + +    PF+S    + 
Sbjct: 689  LGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEG 748

Query: 371  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESE 428
            +       L I  ID + +  +   +PL   PR+ + H ++     I S +    AEE E
Sbjct: 749  VVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEERE 808

Query: 429  ---------------------------------------------------MHFVRLLDD 437
                                                               +  +R+LD 
Sbjct: 809  AARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDP 868

Query: 438  QTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI--- 493
            +T        L   E   S+ + +F D +      VGT   +  +  P K  +  FI   
Sbjct: 869  KTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGM--QFWPKKNLVAGFIHIY 926

Query: 494  --VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
              VEDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G + L  +C +
Sbjct: 927  RFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCEN 981

Query: 551  HGHI-LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                   + +QT  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D 
Sbjct: 982  KLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDT 1041

Query: 610  YLGAENNFNLFTVRKNSE-----------GATDEERGRL--------EVVGEYHLGEFVN 650
              GA+   N++ VR   +           G    E+G+L        E+V ++H+G+ V 
Sbjct: 1042 MAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIV-QFHVGDVVT 1100

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGV 709
              +  S++        G   ++++GTV G IG + A    +   F   L+ ++R+    +
Sbjct: 1101 CLQKASMI-------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPL 1153

Query: 710  GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCK 765
             G +H  +RS          K+ +DGDL E F    +DL R   DE+ +T      E+ K
Sbjct: 1154 CGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRT----PAEILK 1204

Query: 766  RVEE 769
            ++E+
Sbjct: 1205 KLED 1208


>gi|409045147|gb|EKM54628.1| hypothetical protein PHACADRAFT_210427 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1213

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 205/815 (25%), Positives = 355/815 (43%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L P+VD  V++L       Q+    G     SLR++R+G+ + E  S +L GI   +W+
Sbjct: 417  SLDPVVDAKVLNLLPNSDSPQIFAACGRGGRSSLRMLRHGLEVEEVVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +   DDPFD+++++SF++ T +L++   + +EE +  GF S + TL       + L+QV
Sbjct: 477  TKLREDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSSPTLAVQQLGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V    R   NEW+ P G ++  AT N  QV++A     LVY E+  +G L E 
Sbjct: 535  HPHGIRHVLVDRRV--NEWRVPQGKTIVCATTNRRQVVVALSSAELVYFELDLEGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L +  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QERKAMGSTVLALSVGEVPEGRQRTPFLAVGC-EDQTVRIVSLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDAGINKVQPTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                +    + A S R  + Y+    + ++ +    + +   F++   P+ L       L
Sbjct: 712  RVQIQRNPGILALSSRSWLNYTHQNLMHFTPLIFDNLDYAWSFSAELCPEGLIGISGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRR-ICHQ----------------EQSRTFAICSLKNQ 421
             I  I  +  KL   SIPL   PR+ I H                 E+++   I  L+ Q
Sbjct: 772  RIFQIPKLGTKLKQDSIPLSYTPRKMIVHPTNGFFYMIEGDHRVMGEEAKQKKIEELRQQ 831

Query: 422  SCAEESEM----------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILS 459
                + EM                        V  +D QT  FI   PLD  E   SI  
Sbjct: 832  GKQVDEEMLNLPPEVFGRPKAPAGTWASGIRIVSPVDAQTVNFI---PLDNNEAAFSIAV 888

Query: 460  CSF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLN 515
              F +    +   VGTA   ++ P        R   F+ +   ++L+ + ET     ++ 
Sbjct: 889  VPFTARGGELTLVVGTAQDTFLAPRSCTSGFLRTYRFLDDGRDIELLHKTETNDVPLAIM 948

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKS 574
            AF G+L A I + +++Y     D G ++L  +        A+  + T+G  I+VGD+ +S
Sbjct: 949  AFQGRLAAGIGKALRIY-----DIGKKKLLRKVESKNFSNAIVTLNTQGSRIIVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATD 631
            I   +YK  E  +   A D    W++AV ++D +     +   N+F  R   K S+   D
Sbjct: 1004 IFYAVYKPPENRLLIFADDAQPRWITAVTMIDYNTVAAGDRFGNVFVNRLDPKISDQVDD 1063

Query: 632  EERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
            +  G               +  ++  +H+G+ V      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGILMGAPHKTAMIAHFHVGDIVTSIHKVSLV-------AGGRELLLYTG 1116

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G +G++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1117 LHGTVGILVPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLAWRGY-----YVPVKAVVDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1172 DLCEMFARLPASKQSSIATELDRTVGEVLKKLEQL 1206


>gi|402595041|gb|EJW88967.1| hypothetical protein WUBG_00126 [Wuchereria bancrofti]
          Length = 621

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 189/294 (64%), Gaps = 9/294 (3%)

Query: 10  QLIKLNLQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
           QLI+L+ +P A G+ Y+ +L+ Y NL PI D  V  +   GQ Q++TCSGAYKDG++RI+
Sbjct: 335 QLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRII 392

Query: 69  RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
           RNGIGI E ASVEL+GIK M++LR+  D+ FD +L++SF SET +L +N E ELE+TEI 
Sbjct: 393 RNGIGIEELASVELKGIKNMFTLRTRGDE-FDDYLILSFDSETHVLFINGE-ELEDTEIT 450

Query: 129 GFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQV 187
           GF     TL+     +++ ++QVT G V L+   + ++   WKSP   ++      ++  
Sbjct: 451 GFAVDGATLWAGCLFHSKTILQVTHGEVILIDGDNIQV---WKSPKWITLLNYDERSTGQ 507

Query: 188 LLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
           L+   G  L+YLE        +   + E+EISC+DI PIG+    S+I AVG WTD+SV 
Sbjct: 508 LVVACGALLIYLEANSAGFKVITQIECEFEISCIDITPIGKGTLRSEICAVGYWTDLSVA 567

Query: 248 IFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTG 301
           + +LP L  + +E + G+++ RS++L   EG  YLL ALGDG +  F ++MKTG
Sbjct: 568 LRALPQLVEVVREKIAGDMLSRSIMLSPMEGHVYLLVALGDGTVHYFQIDMKTG 621


>gi|66811906|ref|XP_640132.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
 gi|74854972|sp|Q54SA7.1|SF3B3_DICDI RecName: Full=Probable splicing factor 3B subunit 3
 gi|60468134|gb|EAL66144.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1256

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 206/857 (24%), Positives = 365/857 (42%), Gaps = 141/857 (16%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+DF V+DL R+   Q+ +  G   + SL+++R+G+ +    +  L G+  G+W++
Sbjct: 416  SLSPIIDFKVLDLVREENPQLYSLCGTGLNSSLKVLRHGLSVTTITTANLPGVPSGIWTV 475

Query: 92   RSSTD----DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
              ST     D  D ++VVSF+  T +L++   D ++E    G    T TL       + +
Sbjct: 476  PKSTSPNAIDQTDKYIVVSFVGTTSVLSVG--DTIQENHESGILETTTTLLVKSMGDDAI 533

Query: 148  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI-L 206
            +QV     R + S  R   NEW++P   ++  A+AN SQ+ +A  GG ++Y E+     L
Sbjct: 534  IQVFPTGFRHIKSDLR--INEWRAPGRKTIVRASANQSQLAIALSGGEIIYFELDQASNL 591

Query: 207  TEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL--GG 264
             E+    L  +I+C++I+PI +  + ++  AV  W    +R+ SL   N + +  +    
Sbjct: 592  IEIIKKDLRRDIACIEISPIPKGRNMARFIAVSDWEG-PIRVLSLDRDNCLGQVSMLDTD 650

Query: 265  EIIPRSVLLCAFE----GIS-------------------------------YLLCALGDG 289
            ++   S+ +   +    GI                                +L   L +G
Sbjct: 651  KVYIESLSIIEMQLNEMGIETKKSQSQTGQTTTTTTSTSSASSSVTSGGSLFLFVGLKNG 710

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY--------- 340
             +    L+  TGEL+D +   LG +P+ L     + +  + A S R  + Y         
Sbjct: 711  VVKRATLDSVTGELSDIRTRLLGRKPVKLFKVKVRGSNAMLALSSRVWLNYINQGKLDIV 770

Query: 341  -------------------------SSNKKLLYSNVNLKEVSHMCPFNSAAFPD------ 369
                                     S NK +++S   L ++ +       A P       
Sbjct: 771  PLSIEPLENASNLSSEQSAESIVATSENKIIIFSIDKLGDLFNQETIKLNATPKRFIIHP 830

Query: 370  --SLAIAKEGELTIGTID-DIQKLHIRSIPLGEHPRRICHQEQSRTF----------AIC 416
              S  I  E E    T + DI K++ +S  L    ++   QE                  
Sbjct: 831  QTSYIIILETETNYNTDNIDIDKINEQSEKLLLEKQKELQQEMDIDDDDQNNNNEIEPFK 890

Query: 417  SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG--T 474
             L      +     +++++D  T E + +  L+  E G S+ +CSF +   ++  VG  T
Sbjct: 891  KLFKPKAGKGKWKSYIKIMDPITHESLESLMLEDGEAGFSVCTCSFGESGEIFLVVGCVT 950

Query: 475  AYVL-PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 533
              VL P+ ++     +  FI    KL+L+ + E +  VY++  F GKL+  + + I++Y 
Sbjct: 951  DMVLNPKSHKSAHLNLYRFIDGGKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIY- 1009

Query: 534  WMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
                D G ++L  +C        +  + + GD +VVGD+ +SI  + YK  E  +   A 
Sbjct: 1010 ----DMGKKKLLRKCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKRSENMLYVFAD 1065

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEER 634
            D    WM++  +LD D   GA+   N+F +R                  K   G  +   
Sbjct: 1066 DLAPRWMTSSVMLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLNGAP 1125

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYL 693
             +L+ +  + +G+ V      SLV       VG    +++ T++G IG +I     E   
Sbjct: 1126 HKLDHIANFFVGDTVTTLNKTSLV-------VGGPEVILYTTISGAIGALIPFTSREDVD 1178

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
            F   L+ N+R     + G +H  +RS+         KN +DGDL E F  L+  +   IS
Sbjct: 1179 FFSTLEMNMRSDCLPLCGRDHLAYRSY-----YFPVKNIIDGDLCEQFSTLNYQKQLSIS 1233

Query: 754  KTMNVSVEELCKRVEEL 770
            + ++ S  E+ K++EE+
Sbjct: 1234 EELSRSPSEVIKKLEEI 1250


>gi|168064351|ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664326|gb|EDQ51050.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 206/836 (24%), Positives = 373/836 (44%), Gaps = 126/836 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  V +L  +   Q+ +  G     SLRI+R G+ + E A   L G+   +W++
Sbjct: 402  SLMPIMDMKVANLFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTV 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            +   +D FD ++VVSF++ T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 462  KKHANDEFDAYIVVSFVNATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVH 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R + +  R   NEWK+P   ++     N  QV++A  GG L+Y E+   G L E++
Sbjct: 520  PSGIRHIRADGR--INEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
               +  +++CLDI P+ E    S+  AVG + D ++RI SL PD  + +++ + +     
Sbjct: 578  KRDMTGDVACLDIAPVPEGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP-- 634

Query: 268  PRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+LL   +  +            +L   L +G LL   ++M TG+L+D +   LG + 
Sbjct: 635  PESLLLLEVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRA 694

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L +   +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 695  PKLFSALVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVA 754

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH--- 430
               L + TI+ + +  +   +PL   PR+ I H +Q+    + S +     E+ E +   
Sbjct: 755  GDALRVFTIERLGETFNQTVVPLRYTPRKFILHPKQNSLIILESDQGAFNTEDREANKKE 814

Query: 431  ----------------------------------------------FVRLLDDQTFEFIS 444
                                                           +R+LD +T     
Sbjct: 815  AVEAAGYHENGKADGEDEDMADGEDEEPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTC 874

Query: 445  TYPLDTFEYGCSILSCSFSDDSNV--YYCVGTAYVLP--EENEPTKGRILVF-IVEDGK- 498
               L   E   S+ + +F D+  +     VGTA  L    + E + G I ++   ++GK 
Sbjct: 875  LLELQENEAAFSLCAVNFHDNKELGTLIAVGTAKDLQFMPKKEASGGFIHIYRFADEGKV 934

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---IL 555
            L+L+ +    G   +L  F G+LL  + Q +++Y     D G R+L  +C +      I+
Sbjct: 935  LELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTII 989

Query: 556  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            A++  T GD I VGD+ +S   + Y+ +E  +   A D    W++A   +D D   GA+ 
Sbjct: 990  AIH--TYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGADK 1047

Query: 616  NFNLFTVRKNSE-----------GATDEERGRL-------EVVGEYHLGEFVNRFRHGSL 657
              N++ +R   +           G    E+GRL       E + ++H+GE V   +  SL
Sbjct: 1048 FGNIYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTSLQKASL 1107

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNH 714
            +        G   +V++GT+ G +G +  LP    E   F   L+ +LR+    + G +H
Sbjct: 1108 I-------PGGGESVLYGTIMGSMGAL--LPFSSREDVDFFSHLEMHLRQENPPLCGRDH 1158

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +RS          K+ +DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1159 MGFRS-----AYFPVKDVIDGDLCEQYPMLTSELQKKIADDLDRTPGEILKKLEDI 1209


>gi|168046759|ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672847|gb|EDQ59379.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 204/835 (24%), Positives = 371/835 (44%), Gaps = 124/835 (14%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  V ++  +   Q+ +  G     SLRI+R G+ + E A   L G+   +W++
Sbjct: 402  SLMPIMDMKVANIFEEETPQIFSLCGRGPRSSLRILRPGLAVTEMAVSPLPGVPSAVWTV 461

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            +   +D FD ++VVSF++ T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 462  KKHANDEFDAYIVVSFVNATLVLSIG--ETVEEVSDSGFLDTTPSLAISLLGDDSLMQVH 519

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R + +  R   NEWK+P   ++     N  QV++A  GG L+Y E+   G L E++
Sbjct: 520  PSGIRHIRADGR--INEWKTPGKKTIVKVGYNRMQVVIALSGGELIYFEMDMSGQLMEIE 577

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEII 267
               +  +++CL I P+ E    S+  AVG + D ++RI SL PD  + +++ + +     
Sbjct: 578  KRDMTGDVACLHIAPVPEGRQRSRFLAVGSY-DSTIRILSLDPDDCMQILSVQAVSSP-- 634

Query: 268  PRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
            P S+LL   +  +            +L   L +G LL   ++M TG+L+D +   LG + 
Sbjct: 635  PESLLLLEVQASTGGEDGADHPASVFLNAGLQNGVLLRTEVDMVTGQLSDTRTRFLGLRA 694

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
              L +   +    +   S RP + Y      L + ++ + + +   F+S    + +    
Sbjct: 695  PKLFSARVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCAEGVVAVA 754

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMH--- 430
               L + TI+ + +  +   +PL   PR+ I H +Q     + S       EE E +   
Sbjct: 755  GDALRVFTIERLGETFNQTVVPLRYTPRKFILHPKQKSLIILESDLGAFSTEEREANKKE 814

Query: 431  ----------------------------------------------FVRLLDDQTFEFIS 444
                                                           +R+LD +T     
Sbjct: 815  AVKATGGRDDEKANGEDEEMADGENEDPLPDEQYGYPKAESNKWASCIRVLDPKTSTTTC 874

Query: 445  TYPLDTFEYGCSILSCSFSDDSNV--YYCVGTA---YVLPEENEPTKGRILVF-IVEDGK 498
               L   E   S+ + +F D+  +     VGTA     +P++ E + G I ++  VE+G+
Sbjct: 875  LLELQENEAAFSLCAVNFHDNKELGTLIAVGTAKNMQFMPKK-ESSGGFIHIYRFVEEGR 933

Query: 499  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH---I 554
             L+L+ +    G   +L  F G+LL  + Q +++Y     D G R+L  +C +      I
Sbjct: 934  ILELVHKTPVDGVPTALCQFQGRLLVGVGQVLRIY-----DLGKRKLLRKCENKNFPNTI 988

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            +A++  T GD I VGD+ +S   + Y+ +E  +   A D    W++A   +D D   GA+
Sbjct: 989  IAIH--TYGDRIYVGDIQESFHYVKYRRDENQLYTFADDSCPRWLTASLHIDFDTMAGAD 1046

Query: 615  NNFNLFTVRKNSE-----------GATDEERGRL-------EVVGEYHLGEFVNRFRHGS 656
               N++ +R   +           G    E+GRL       E + ++H+GE V   +  S
Sbjct: 1047 KFGNVYVMRLPQDVSEEIEDDPTGGKIKWEQGRLNGAPNKVEEIIQFHVGEVVTSLQKAS 1106

Query: 657  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
            L+        G   +V++GT+ G +G +      E   F   L+ +LR+    + G +H 
Sbjct: 1107 LI-------PGGGESVLYGTIMGSVGALLPFSSREDVDFFSHLEMHLRQENPPLCGRDHM 1159

Query: 716  QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +RS          K+ +DGDL E +  L+     +I+  ++ +  E+ K++E++
Sbjct: 1160 AFRS-----AYFPVKDVIDGDLCEQYPMLTSELQRKIADDLDRTPGEVLKKLEDI 1209


>gi|224100909|ref|XP_002312063.1| predicted protein [Populus trichocarpa]
 gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 208/855 (24%), Positives = 373/855 (43%), Gaps = 131/855 (15%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP    + V + ++  +L P++D  V ++  +   Q+ +  G     SLRI+R G+ I+
Sbjct: 385  FQPRGLKNLVRI-DQVESLMPVMDMKVANIFDEETPQIFSLCGRGPRSSLRILRPGLAIS 443

Query: 76   EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A  +L G+   +W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T
Sbjct: 444  EMAVSQLPGVPSAVWTVKRNANDEFDAYIVVSFNNATLVLSIG--ETVEEVSDSGFLDTT 501

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+Q+    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 502  PSLAVSLIGDDSLMQIHPNGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGG 559

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+  ++  +++CLDI P+ E    S+  AVG + D ++R+ SL P
Sbjct: 560  ELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DNTIRVLSLDP 618

Query: 253  D--LNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
            D  + +++ + +     P S+L    +               +L   L  G L   +++M
Sbjct: 619  DDCMQILSVQSVSAP--PESLLFLEVQASIGGEDGADHPASLFLNAGLQTGVLFRTVVDM 676

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             TG+L+D +   LG +   L   + +    +   S RP + Y      L + ++ + + +
Sbjct: 677  VTGQLSDSRSRFLGLRAPKLFAINVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEY 736

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC- 416
               F+S    + +       L I TI+ + +  +  +IPL   PR+   Q + +   I  
Sbjct: 737  AASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIE 796

Query: 417  SLKNQSCAEESE------------------------------------------------ 428
            S +    AEE E                                                
Sbjct: 797  SDQGAYTAEEREAAKKECFEAAGMGENGSANAEKMENGDDDDKDDPLSDEQYGYPKAEAD 856

Query: 429  --MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPT 485
              +  +R+LD ++        L   E   S+ + +F D +      VGTA  L  +  P 
Sbjct: 857  RWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEHGTLLAVGTAKGL--QFWPK 914

Query: 486  KGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
            +  I  FI     V+DGK L+L+ + + +G   +L  F G+LLA I   ++LY     D 
Sbjct: 915  RSLIAGFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DL 969

Query: 540  GTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            G + L  +C +     ++  + T  D I VGD+ +S     Y+ +E  +   A D    W
Sbjct: 970  GKKRLLRKCENKLFPNSIVSIHTYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVPRW 1029

Query: 599  MSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVV 640
            ++A   +D D   GA+   N++ VR                  K  +G  +    ++E +
Sbjct: 1030 LTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEI 1089

Query: 641  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQ 699
             ++H+G+ VN  +  SL+        G    +++GTV G +G +      +   F   L+
Sbjct: 1090 VQFHIGDVVNSLQKASLI-------PGGGECIMYGTVMGSVGALLPFTSRDDVDFFSHLE 1142

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKT 755
             +LR+    + G +H  +RS          K+ +DGDL E F    LD  R   DE+ +T
Sbjct: 1143 MHLRQDHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRT 1197

Query: 756  MNVSVEELCKRVEEL 770
                  E+ K++EE+
Sbjct: 1198 PG----EILKKLEEV 1208


>gi|347829304|emb|CCD45001.1| similar to pre-mRNA-splicing factor rse1 [Botryotinia fuckeliana]
          Length = 1212

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 209/823 (25%), Positives = 370/823 (44%), Gaps = 84/823 (10%)

Query: 12   IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNG 71
            I  + +P    S VE ++   ++ P++D  V +L  +   Q+ +  G     + R +++G
Sbjct: 404  IYFHPRPAENLSLVESID---SMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHG 460

Query: 72   IGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
            + ++E    EL G+   +W+ + +  D +D ++++SF + T +L++   + +EE    GF
Sbjct: 461  LEVSEIVESELPGVPSAVWTTKLTRGDTYDAYIILSFSNGTLVLSIG--ETVEEVTDTGF 518

Query: 131  CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
             S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A
Sbjct: 519  LSSAPTLAVQQLGEDSLIQVHPKGIRHIRADHR--VNEWAAPQHRSIVAATTNERQVAVA 576

Query: 191  TGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
               G +VY E+  DG L E  +  ++   ++CL +  + E    SQ  AVG   D +VRI
Sbjct: 577  LSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRI 635

Query: 249  FSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTG 301
             SL PD  L  K        P ++ + A    S      YL   L  G  L  +L+  TG
Sbjct: 636  LSLDPDSTLENKSVQALTSPPNALSIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTG 695

Query: 302  ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHM 359
            EL+D +   LG +P+ L   + +  T V A S RP + YS    K  + + ++   +   
Sbjct: 696  ELSDTRTRFLGPKPVKLFRVAVQGQTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWG 755

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
              F+S    + +   +   L I +I+ +   L   SIPL   PRR     +   F +   
Sbjct: 756  WNFSSEQCTEGMVGIQGQNLRIFSIEKLTDNLLQESIPLTYTPRRFVRHPEHACFYVIEA 815

Query: 419  KNQSCAEESEMHFVRLLDDQTF-----------EF------------------------I 443
             N   +  ++    +LL+D +            EF                        +
Sbjct: 816  DNNILSPATKQ---KLLEDPSVTNGDATVLPPEEFGYPRGTNHWASCISVVDPVTEKKVL 872

Query: 444  STYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-L 499
            ST  L+  E   SI   +F S +   + CVGT   ++      + G I V+   EDGK L
Sbjct: 873  STIHLEDNECAVSIAVVAFASQEDETFLCVGTGKDMVVSPRSFSAGFIHVYRFHEDGKEL 932

Query: 500  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 559
            + I + + +    +L AF G+LLA + + +++Y   +R    R+ QSE   +   + + +
Sbjct: 933  EFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMR-QLLRKAQSEVAPN---MIVGL 988

Query: 560  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 619
            QT+G  I+V D+ +SI++++YK +E  +     D  A W S   ++D +   G +   NL
Sbjct: 989  QTQGSRIIVSDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNL 1048

Query: 620  FTVR---KNSEGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQ 668
            + +R   K SE A +E  G      R  + G  H    +       + M +  +++  G 
Sbjct: 1049 WLLRCPAKASEEADEEGSGAHLLHERQYLAGAPHRLTLMAHNFSQDIPMSIQKTNLVAGG 1108

Query: 669  IPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               +++  + G +G+ I  +  E   F + L+ +LR     + G +H  +RS+      V
Sbjct: 1109 RDCLLWSGLQGTLGILIPFVSREDVDFFQTLEQHLRSEDPPLAGRDHLIYRSY-----YV 1163

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              K  +DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1164 PVKGVIDGDLCERYTLLPTDKKQMIAGELDRSVREIERKISDI 1206


>gi|346971485|gb|EGY14937.1| pre-mRNA-splicing factor RSE1 [Verticillium dahliae VdLs.17]
          Length = 1230

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 213/817 (26%), Positives = 366/817 (44%), Gaps = 99/817 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  V +L  +   Q+ T  G     + RI+++G+ +NE  + EL GI 
Sbjct: 434  LVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVASELPGIP 493

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ S  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 494  SAVWTLKLSRGDQYDAYIVLSFTNATLVLSIG--ETVEEVNDSGFLTSVPTLAAQLLGGE 551

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +      NEW +P   S+  AT N  QV +A   G +VY E+  DG
Sbjct: 552  GLIQVHPKGIRHIRNGQV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDSDG 608

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K   
Sbjct: 609  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPETTLESKSVQ 667

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG +P+
Sbjct: 668  ALTAPPTSLAVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPV 727

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F+S    + +   
Sbjct: 728  KLFQVTVQGRTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGVVGI 787

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCA 424
            +   L I  I+ +   L  +SIPL   PRR+  H E    + I S        L+ Q  A
Sbjct: 788  QGQSLRIFAIEKLGDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDNNTLPPELRAQLLA 847

Query: 425  EESEMHF-VRLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
            + S ++   R L    F +                       + T  LD  E   S    
Sbjct: 848  DPSVVNGDARTLPPAEFGYPRAKGRWASCISVIDPLSEELQTLQTVDLDNNEAAVSAAIV 907

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 516
             F S D+  +  VGT   ++    + T+G I ++   EDG+ L+ I + + +    +L A
Sbjct: 908  PFTSQDNESFLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIHKTKVEEPPTALLA 967

Query: 517  FNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            F G+L+A + + +++Y    K ML     R+ Q++       L + + T+G  IVVGD+ 
Sbjct: 968  FQGRLVAGVGKTLRIYDLGQKQML-----RKAQADVAPQ---LIVSLSTQGSRIVVGDVQ 1019

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGA 629
            + ++ ++YK     +     D  A WM+   ++D +   G +   N+F VR   K S+ A
Sbjct: 1020 QGVTYVVYKPLSNKLIPFVDDTVARWMTCTTMVDYESVAGGDKFGNIFIVRAPEKASQEA 1079

Query: 630  TDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
             +E  G               RL +V  ++  + +      SLV       VG    +++
Sbjct: 1080 DEEGAGLHLTNTRDYLHGTPHRLSLVSHFYSQDVLTSITKTSLV-------VGGQDVLLW 1132

Query: 675  GTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
              ++G IGV I  +  E   F + L+ +LR     + G +H  +R +    K V     +
Sbjct: 1133 SGISGTIGVFIPFVTREDADFFQTLEQHLRTEDAPLAGRDHLMYRGYYAPVKGV-----I 1187

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1188 DGDLCERYTLLPNDKKQMIAGELDRSVREIERKISDI 1224


>gi|310793065|gb|EFQ28526.1| CPSF A subunit region [Glomerella graminicola M1.001]
          Length = 1212

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 204/813 (25%), Positives = 359/813 (44%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   ++ P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG
Sbjct: 534  GLIQVHPKGIRHIRQGQV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPESTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+
Sbjct: 650  ALTAPPSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + YS    +  L + +N  ++  +  F+S    + +   
Sbjct: 710  RLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFLVTPLNYVDLEWVWNFSSEQCEEGVVGI 769

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  I+++   +  +SIPL   PRR+    +   F      N +   +     + 
Sbjct: 770  QGQSLRIFAIENLGDTITQKSIPLSYTPRRLLKHPEYPMFYTIEADNNTLPPDLRAKLIA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     R+L    F +                       + T  LD  E   S    
Sbjct: 830  EPGVVNGDARILPPDEFGYPKGKGRWASCISVIDPLAEDQRVLQTIDLDNNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNA 516
            SF S DS  +  VGT   ++    + ++G I V+   EDG +L+ I + + +    +L  
Sbjct: 890  SFASQDSESFLIVGTGKDMVVNPRQFSEGYIHVYRFGEDGHELEFIHKTKVEEPPSALLG 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G+LLA I + +++Y   LR    R+ Q++       L + + T+G  I+VGD+   I+
Sbjct: 950  FQGRLLAGIGKTLRIYDLGLR-QMLRKAQADVTPQ---LIVSLSTQGSRIIVGDVQHGIT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK     +     D  + W++   ++D +   G +   N+F VR   K ++ A DE 
Sbjct: 1006 YVVYKPTTNKLIPFVDDTVSRWVTCTTMVDYESVAGGDKFGNMFLVRCSEKATQEADDES 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL ++   +  +        SLV       VG    +++  +N
Sbjct: 1066 GGLHLINTRDYLHGTPHRLSLLAHSYTQDVPTSITKTSLV-------VGGQDVLLWSGIN 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ ++R     + G +H  +R +      V  K  +DGDL
Sbjct: 1119 GTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGY-----YVPVKGVIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYTLLPSEKKQMIAGELDRSVREIERKISDI 1206


>gi|356576847|ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 212/838 (25%), Positives = 364/838 (43%), Gaps = 129/838 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W++
Sbjct: 401  SLMPIMDMKVSNLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTV 460

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D FD ++VVSF + T +L++   + +EE    GF   T +L       + L+QV 
Sbjct: 461  KKNAIDEFDAYIVVSFTNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVH 518

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +    R   NEW++P   +++   +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 519  PNGIRHIREDGR--INEWRTPGKRTISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVE 576

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
              ++  +++CLDI P+ E    S+  AVG + D ++RI SL PD  +           P 
Sbjct: 577  KHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQALSVQSVSSAPE 635

Query: 270  SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
            S+L    +               +L   L +G +   +++M TG+L+D +   LG +   
Sbjct: 636  SLLFLEVQASVGGEDGADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPK 695

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
            L     +    +   S RP + Y      L + ++ + + +   F+S    + +      
Sbjct: 696  LFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGE 755

Query: 378  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFA-ICSLKNQSCAEESEM------ 429
             L I TI+ + +  +   IPL   PR+   Q + +    I S +    AEE E       
Sbjct: 756  ALRIFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAARKECF 815

Query: 430  --------------------------------HF-------------VRLLDDQTFEFIS 444
                                            H+             +R+LD +T     
Sbjct: 816  ESAQAGENGTESADQMENGGEDEDKDDPLSDEHYGYPKAESDKWASCIRVLDPRTGNTTC 875

Query: 445  TYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK- 498
               L   E   SI + +F D +      VGTA     LP+    T G I ++  VEDG+ 
Sbjct: 876  LLELQENEAAFSICTINFHDKEYGTLLAVGTAKGLQFLPKRT-ITAGFIHIYRFVEDGRS 934

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHIL 555
            L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  +C +      I+
Sbjct: 935  LELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKLFPNTIV 989

Query: 556  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            +++     D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+ 
Sbjct: 990  SIHAYR--DRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGADK 1047

Query: 616  NFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
              N++ VR                  K  +G  +    ++E + ++H+G+ V   +  SL
Sbjct: 1048 FGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHIGDVVTCLQKASL 1107

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G    ++FGTV G +G + A    +   F   L+ ++R+    + G +H  
Sbjct: 1108 I-------PGGGECIVFGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDHPPLCGRDHMA 1160

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS          K+ +DGDL E +    +DL R   DE+ +T      E+ K++EE+
Sbjct: 1161 YRS-----AYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG----EILKKLEEV 1209


>gi|380481704|emb|CCF41690.1| CPSF A subunit region, partial [Colletotrichum higginsianum]
          Length = 932

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 173/664 (26%), Positives = 310/664 (46%), Gaps = 75/664 (11%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLER-----------QGQGQVVTCSG 58
           QL+++N++   K   V+ +    ++ PI+DF ++DL              GQ ++V   G
Sbjct: 309 QLLQINME-SLKTRLVQTIP---SIAPILDFSIMDLGNAGDSQVGNAFSSGQARIVAGCG 364

Query: 59  AYKDGSLRIVRNGIGINEQASVE-LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            +++GSLR +R+ +G+ +   +E LQ ++G++SLRS      DT LVVSFI+ETRI + +
Sbjct: 365 VHQNGSLRSIRSSVGLEDIGVLEDLQDVRGLFSLRSHGSPKVDT-LVVSFITETRIFSFD 423

Query: 118 LEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
            E  +EE  E +G      TL        +L+QVTS +V L+ S      N W  P G +
Sbjct: 424 PEGGIEEVFEFQGLALDRPTLVATTLPDGRLLQVTSTTVTLLESERGITLNTWAVPDGKA 483

Query: 177 VNVATANASQVLLATGGGHLVYLEIGDGILTEVKH-----AQLEYEISCLDINPIGENPS 231
           +  A+AN   VLL+  G  LV L + + +  + +         E +ISC     I     
Sbjct: 484 IVNASANNKWVLLSINGTTLVSLNLLNNLSAQEQVLGRDIGGHEDQISC-----IHAASD 538

Query: 232 YSQIAAVGMWTDISVRIFSLPDLNLITKEHL----GGEIIPRSVLLCAFEGI----SYLL 283
              +  VG W   SV I  L  L+ +  E +        +PR + L            L 
Sbjct: 539 LDDVGVVGFWATGSVSIIDLRTLDALHGETIKQTDDSVSVPRDLALVQLHPPHLLGPTLF 598

Query: 284 CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF---SSKNTTHVFAASDRPTVIY 340
            A+ DG +++F ++ +   L+ RK V+LG+Q   L        +  +++FA ++  ++IY
Sbjct: 599 VAMEDGQVVSFNVSKQDFSLSSRKSVTLGSQQAGLHVLPRPGGEGISNIFATTEHSSLIY 658

Query: 341 SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEH 400
           SS  +++YS    ++V+++ PF+S AFPD++ +A +  + I  ID  ++ H+  +PL E 
Sbjct: 659 SSEGRIIYSAATAEDVTYIAPFDSEAFPDAIFLATDQNIRIAHIDAERRTHVNPLPLRET 718

Query: 401 PRRICHQEQSRTFAICSLKNQSC-AEESEMHFVRLLDDQTFEFI-STYPLDTFEYGCSIL 458
            RR+ +    R F I ++  +    EE      RL+D+     +   + LD         
Sbjct: 719 VRRVAYSPALRAFGIGTISRELVNNEEVVTSSFRLVDEIVLGVVGKPFHLDG-------- 770

Query: 459 SCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
               S  + +   V  A +     +P                  AE+   GA  SL    
Sbjct: 771 ----STSTEMVESVIRAELPDSMGQP------------------AERFIIGACRSLGIMG 808

Query: 519 GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            KL+A +++ + +Y++      +  L+           + +   G+ I + DLM+S++L+
Sbjct: 809 EKLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVDIDVNGNMIGIADLMQSMTLV 868

Query: 579 IY----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER 634
            +       +  + ERAR +   W ++V  L+   +L A+   NL  +R+N +  T+ ++
Sbjct: 869 EFIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPDAPTEHDQ 928

Query: 635 GRLE 638
            ++E
Sbjct: 929 KQME 932


>gi|395333071|gb|EJF65449.1| hypothetical protein DICSQDRAFT_178021 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1213

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 211/846 (24%), Positives = 363/846 (42%), Gaps = 119/846 (14%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDG 63
            Y  P+ L  L L        V+ LE   +L PI+D  V++L       Q+    G     
Sbjct: 400  YFRPRALDNLTL--------VDELE---SLCPILDSKVMNLLPNSDTPQIFAACGRGARS 448

Query: 64   SLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            + R +R+G+ + E  S +L GI   +W+ +   DDP+D+++++SF++ T +L +   + +
Sbjct: 449  TFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLKEDDPYDSYIILSFVNGTLVLCIG--ETI 506

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            EE +  GF S   TL       + L+QV    +R V S  R   NEW+ P G ++  AT 
Sbjct: 507  EEVQDTGFLSSAPTLAVQQIGADALLQVHPHGIRHVLSDRRV--NEWRVPSGKTIVCATT 564

Query: 183  NASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGM 240
            N  QV++A     LVY E+  DG L E +  + +   +  L I  + E    +   AVG 
Sbjct: 565  NKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC 624

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCA---------FEGISYLLCALGDGHL 291
              D +VRI SL   + +    L     P S +  A          +  +++   L +G L
Sbjct: 625  -EDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDAGINKTQPTTFVNIGLQNGVL 683

Query: 292  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
            L  +L+   G+LTD +   LGT+PI L   + +    + A S RP + Y+    + ++ +
Sbjct: 684  LRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQRNPAILALSSRPWLNYTHQNFMHFTPL 743

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQ--- 407
              + + +   F++    + L       L I  I  +  KL   SIPL   PR++      
Sbjct: 744  IFENLDYAWSFSAELCQEGLIGISGSLLRIFQIPKLGTKLKQDSIPLSYTPRKLIPHPHN 803

Query: 408  --------------EQSRTFAICSLKNQSCAEESEM----------------------HF 431
                          E++    +  L+    A + EM                        
Sbjct: 804  GLLYLIEGDHRVMSEEAAAKQLQQLRESGRAVDEEMVNLPPEQFGRPKAPAGTWASCIRI 863

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VYYCVGTA---YVLPEENEPTKG 487
            +  LD QT   I    LD  E   S+    F+  +N ++  VGTA   ++ P        
Sbjct: 864  ISPLDAQTVNVIH---LDNNEAAFSLAIVPFAAKNNELHLVVGTAQDTFLAPRSCTSGFL 920

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRE 543
            R   F  +   L+L+ + ET     ++ AF GKL+A + + ++LY    K +LR    + 
Sbjct: 921  RTYRFTDDGRNLELLHKTETNDVPLAIMAFQGKLVAGVGKALRLYDIGKKKLLRKVENKT 980

Query: 544  LQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 603
            L S          + + T+G  I++GD+ +S+   +YK  E  +   A D    W++A  
Sbjct: 981  LGSTI--------VTLNTQGSRIIIGDMQESVFYAVYKPPENRLLVFADDVQPRWVTATT 1032

Query: 604  ILDDDIYLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHL 645
            +LD +  + ++   N+F  R   K S+   D+  G               +  ++  +H+
Sbjct: 1033 MLDYNTVVASDRFGNVFVNRLDAKISDQIDDDPTGAGILHEKGVLFGAPHKTAMLAHFHI 1092

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRK 704
            G+ V      SLV        G    +++  ++G IG++   +  E    L  L+ ++R 
Sbjct: 1093 GDIVTSLNKISLV-------AGGREVILYTCLHGTIGILVPFVSKEDVDLLTTLEQHMRT 1145

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
                + G +H  WR +      V  K  +DGDL ESF  L   +   I+  ++ +V E+ 
Sbjct: 1146 EQLSLVGRDHLAWRGY-----YVPVKAVVDGDLCESFAKLPANKQSSIAGELDRTVGEVL 1200

Query: 765  KRVEEL 770
            K++E+L
Sbjct: 1201 KKLEQL 1206


>gi|170083859|ref|XP_001873153.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650705|gb|EDR14945.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1213

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 196/812 (24%), Positives = 352/812 (43%), Gaps = 96/812 (11%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++L       Q+    G     + R +R+G+ + E  S +L GI   +W+
Sbjct: 417  SLDPILDSKVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEESVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             + + DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKRTEDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADRRV--NEWRVPQGKTIVSATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL     +    L     P
Sbjct: 593  QDRKAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPETTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                +    + A S R  + Y+    + ++ +    + +   F++   P+ L       L
Sbjct: 712  RVQIQRNPGILALSSRSWLNYTHQNLMHFTPLIYDNLDYAWSFSAELSPEGLIGIAGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES----------- 427
             I  +  +  KL   SIPL   PR+      +  F +    +++  EE+           
Sbjct: 772  RIFQVPKLGTKLKQDSIPLSYTPRKFITHPGNNYFYLIEGDHRTLGEEAASTKLDEFRRQ 831

Query: 428  -------EMHF------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                   E++                   +R++D    + ++  P+D+ E   S+    F
Sbjct: 832  GKSFDDGEINIPPEVFGRPKAPAGTWASCIRIIDPVEAKTVAVIPMDSNEAAFSLAIVPF 891

Query: 463  S-DDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S  +  ++  VGTA    V P        R   F  E   L+   + E      +L AF 
Sbjct: 892  SARNGELHLVVGTAADTIVSPRSCTSGYLRTYKFTNEGAGLEFQHKTEVDDVPLALLAFQ 951

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISL 577
            G+L+A + + +++Y     D G ++L  +  +     A+  + T+G  I+VGD+ +SI  
Sbjct: 952  GRLVAGVGKALRIY-----DIGKKKLLRKVENKTFSSAIVTLSTQGSRIIVGDMQESIQF 1006

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 634
             +YK  E  +   A D    W++A  ++D +  +  +   N+F  R   K SE   D+  
Sbjct: 1007 AVYKPPENRLLVFADDSQPRWITASSMVDYNTIVAGDRFGNIFVNRLDPKVSEQVDDDPT 1066

Query: 635  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
            G               + +++  +HLG+ V      SLV        G    +++  ++G
Sbjct: 1067 GAGILHEKGILMGAPHKTKMLAHFHLGDLVTSIHKVSLV-------AGGREVLMYTGLHG 1119

Query: 680  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++   +  E   F+  L+ ++R     + G +   WR +    K V     +DGDL 
Sbjct: 1120 TIGILVPFVSKEDVDFISTLEQHMRTEQSSLVGRDQLSWRGYYAPVKAV-----VDGDLC 1174

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E++  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1175 ETYARLPAAKQSSIAGELDRTVGEVLKKLEQL 1206


>gi|390601867|gb|EIN11260.1| hypothetical protein PUNSTDRAFT_118747 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1214

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 195/817 (23%), Positives = 364/817 (44%), Gaps = 88/817 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            + +L+   +L PI+D  V++L       Q+    G     + R +R+G+ + E  S +L 
Sbjct: 408  LALLDTVESLSPIIDARVMNLLPNSDTPQIFAACGRGARSTFRTLRHGLEVEETVSSDLP 467

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
            GI   +W+ +   DD  D+++++SF++ T +L++   + +EE +  GF S   T+     
Sbjct: 468  GIPNAVWTTKLKEDDAHDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTIAVQQI 525

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
              + L+QV    +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+ 
Sbjct: 526  GADALLQVHPQGIRHVLADRRV--NEWRVPAGKTIVTATTNKRQVVVALSSAELVYFELD 583

Query: 203  -DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 260
             +G L E +  + +   +  L I  + E    +   AVG   D +VRI SL   + +   
Sbjct: 584  LEGQLNEYQDRKAMGSTVLALSIGEVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLETI 642

Query: 261  HLGGEIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
             L     P + +  A              ++   L +G LL  +L+   G+LTD +   L
Sbjct: 643  SLQALTAPPTAICIADMLDASINKVHPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFL 702

Query: 312  GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL 371
            GT+P+ L   + +    + A S R  + Y+ +  + ++ +  + +     F++   PD L
Sbjct: 703  GTRPVRLIRVNVQRNPAILALSSRSWLNYTHHNLMHFTPLIFENLDFAWSFSAELCPDGL 762

Query: 372  AIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES--- 427
                   L I  I  +  KL   ++PL   PR+      +R F +    +++  EE+   
Sbjct: 763  IGIAGSVLRIFQIPRLGTKLKQDAMPLTYTPRKFIPHPANRYFYLIEGDHRTWGEEAVQK 822

Query: 428  --------------EM-------------------HFVRLLDDQTFEFISTYPLDTFEYG 454
                          EM                     +R++D    + ++T P+D  E  
Sbjct: 823  KVAELRQAGKQVDEEMLSLPADTFGRPKAPAGTWASLIRIIDPVDAKTVATIPIDNNECA 882

Query: 455  CSILSCSF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
             SI    + +    ++  VGTA   ++ P        R   F  E   L+L+ + ET   
Sbjct: 883  FSIAVVPWAARGGELHLVVGTAQDTFLAPRSCTSGFLRTYAFTNEGAGLELLHKTETDDV 942

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVG 569
              ++ AF G+L+A + + +++Y     D G ++L  +  +     A+  + T+G  I+VG
Sbjct: 943  PMAVMAFQGRLVAGVGKSLRIY-----DIGKKKLLRKVENKSFATAIVTLATQGSRILVG 997

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNS 626
            D+ +S++  +YK  E  +   A D    W+S+  ++D +  +  +   N+F  R   K S
Sbjct: 998  DMQESMAYAVYKPPENRLLVFADDVQPRWISSSTMVDYNTVIAGDRFGNVFVNRLDAKVS 1057

Query: 627  EGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----TVIFGT 676
            E   D+  G      +  ++G  H  + +  +  G +V  L  S V  +P     +++  
Sbjct: 1058 EQVDDDPTGAGILHEKGLLMGAPHKTKMLCHYHVGDIVTSL--SKVALVPGGREVILYTG 1115

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIK--GVGGLNHEQWRSFNNEKKTVDAKNFL 733
            ++G IGV+   +  E   F+  L+ ++R  +   G+ G +H  WR +      V  K  +
Sbjct: 1116 LHGTIGVLVPFVSKEDVDFISTLEQHMRTELTQFGLVGRDHLSWRGY-----YVPVKAVV 1170

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E+F  L   +   I+  ++ +V E+ K++++L
Sbjct: 1171 DGDLCEAFATLPAPKQSSIAGELDRTVGEVLKKLDQL 1207


>gi|374095609|gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 206/840 (24%), Positives = 367/840 (43%), Gaps = 125/840 (14%)

Query: 28   LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 86
            +++  +L PI+D  +++L  +   Q+ T  G     SLRI+R G+ I+E A  +L G+  
Sbjct: 396  IDQVESLMPIMDMKIINLFEEETPQIFTLCGRGPRSSLRILRPGLAISEMAVSQLPGVPS 455

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
             +W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T +L       + 
Sbjct: 456  AVWTVKKNVNDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDS 513

Query: 147  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGI 205
            L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG ++Y E+   G 
Sbjct: 514  LMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGGEIIYFEVDMTGQ 571

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHL 262
            L EV+  ++  +++CLDI P+ E    S+  AVG + D  +RI SL PD  + +++ + +
Sbjct: 572  LMEVEKQEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DNCIRILSLDPDDCMQVLSLQSV 630

Query: 263  GGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
                 P S+L    +               +L   L +G L   +++M TG+L+D +   
Sbjct: 631  SSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMVTGQLSDARSRF 688

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            LG +   L +   +    +   S RP + Y      L + ++ + +     F+S    + 
Sbjct: 689  LGLRAPKLFSVIIRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFAASFSSDQCAEG 748

Query: 371  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSL----------- 418
            +       L + TI+ + +  +  +IPL   PR+   Q + +   I              
Sbjct: 749  VVAVAGDALRVFTIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIESDQGAYAAEQRE 808

Query: 419  -KNQSCAEESEM--------------------------------------HFVRLLDDQT 439
               + C E++ M                                        +R+LD +T
Sbjct: 809  NAKKECFEDAGMGENGKVEQMENGGDDEDKEDPLSDEQYGYPKVESDRWVSCIRVLDPRT 868

Query: 440  FEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGRILVF-IVE 495
                    L   E   SI   +F D +      VGTA  L    +   + G I ++  VE
Sbjct: 869  ANTTCLLELQDNEAAFSICLVNFHDKEYGTLLAVGTAKGLQFWPKRSISSGYIHIYRFVE 928

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
            DGK L+L+ + +      +L  F GKLLA +   ++LY     D G R+L  +C +    
Sbjct: 929  DGKSLELLHKTQVDDVPLALCQFQGKLLAGVGSVLRLY-----DLGKRKLLRKCENKLFP 983

Query: 555  LALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
              +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA
Sbjct: 984  NTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTMAGA 1043

Query: 614  ENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHG 655
            +   N++ VR                  K  +G  +    ++E + ++H+G+ V   +  
Sbjct: 1044 DKFGNIYFVRLAQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVVTCLQKA 1103

Query: 656  SLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            SL+   P         VI+GTV G +G ++A    +   F   L+ ++R+    + G +H
Sbjct: 1104 SLI---PSGG----ECVIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQENPPLCGRDH 1156

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +RS          K+ +DGDL E F    +D+ R   DE+ +T      E+ K++EE+
Sbjct: 1157 MAYRS-----AYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPG----EILKKLEEV 1207


>gi|356536504|ref|XP_003536777.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 211/843 (25%), Positives = 366/843 (43%), Gaps = 129/843 (15%)

Query: 28   LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 86
            +++  +L PI+D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI  
Sbjct: 396  IDQVESLMPIMDMKVSNLFEEETPQIYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPS 455

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
             +W+++ +  D FD ++VVSF + T +L++   + +EE    GF   T +L       + 
Sbjct: 456  AVWTVKKNVIDEFDAYIVVSFTNATLVLSIG--ETVEEVSDSGFLDTTPSLAVSLIGDDS 513

Query: 147  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGI 205
            L+QV    +R +    R   NEW++P   S++   +N  QV++A  GG L+Y E+   G 
Sbjct: 514  LMQVHPNGIRHIREDGR--INEWRTPGKRSISKVGSNTLQVVIALSGGELIYFEMDVTGQ 571

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 264
            L EV+  ++  +++CLDI P+ E    S+  AVG + D ++RI SL PD  +        
Sbjct: 572  LMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQALSVQSV 630

Query: 265  EIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
               P S+L    +               +L   L +G +   +++M TG+L+D +   LG
Sbjct: 631  SSAPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVMFRTVVDMVTGQLSDSRSRFLG 690

Query: 313  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
             +   L     +    +   S RP + Y      L + ++ + + +   F+S    + + 
Sbjct: 691  LRAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCVEGVV 750

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFA-ICSLKNQSCAEESEM- 429
                  L I TI+ + +  +   IPL   PR+   Q + +    I S +    AEE E  
Sbjct: 751  AVAGEALRIFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVMIESDQGALTAEEREAA 810

Query: 430  -------------------------------------HF-------------VRLLDDQT 439
                                                 H+             +R+LD +T
Sbjct: 811  RKECFEAAQAGENGTGSADQMENGGDDEDKDDPLSDEHYGYPKAESDKWASCIRVLDPRT 870

Query: 440  FEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IV 494
                    L   E   SI + +F D +      VGTA     LP+    T G I ++  V
Sbjct: 871  SNTTCLLELQENEAAFSICTVNFHDKEYGTLLAVGTAKGLQFLPKRTV-TAGFIHIYRFV 929

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH-- 551
            EDG+ L+L+ + + +G   +L  F G+LLA I   ++LY     D G + L  +C +   
Sbjct: 930  EDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKKRLLRKCENKLF 984

Query: 552  -GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
               I++++     D I VGD+ +S     Y+ +E  +   A D    W++A   +D D  
Sbjct: 985  PNTIISIHAYR--DRIYVGDVQESFHYCKYRRDENQLYIFADDCVPRWLTASYHIDFDTM 1042

Query: 611  LGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRF 652
             G +   N++ VR                  K  +G  +    ++E + ++H+G+ V   
Sbjct: 1043 AGTDKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGAPNKVEEIVQFHVGDVVTCL 1102

Query: 653  RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGG 711
            +  SL+        G    ++FGTV G +G + A    +   F   L+ ++R+    + G
Sbjct: 1103 QKASLI-------PGGGECIVFGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDHPPLCG 1155

Query: 712  LNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRV 767
             +H  +RS          K+ +DGDL E +    +DL R   DE+ +T      E+ K++
Sbjct: 1156 RDHMAYRS-----AYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG----EILKKL 1206

Query: 768  EEL 770
            EE+
Sbjct: 1207 EEV 1209


>gi|348503892|ref|XP_003439496.1| PREDICTED: splicing factor 3B subunit 3-like [Oreochromis niloticus]
          Length = 1217

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 203/863 (23%), Positives = 374/863 (43%), Gaps = 130/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   NL PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQENLSPIMSCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGDKGTIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                VRL++      +    L+  E   S+ +C F++  + +Y 
Sbjct: 846  NLPEAIFGSPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAACRFTNTGDDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G I  + +  G  KL+ + +   +    ++  F G+ L  + +
Sbjct: 906  LVGVARDMILNPRSVGGGFIYTYRLVSGGEKLEFVHKTPVEDVPLAIAPFQGRALVGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G ++L  +C   H   L   + T G  ++V D+ +S+  + Y+  E  
Sbjct: 966  LLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ 1020

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERG 635
            +   A D    W++   +LD D    A+   N+  VR   N+    DE         +RG
Sbjct: 1021 LIIFADDTYPRWVTTACLLDYDTMAAADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG 1080

Query: 636  RL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 687
             L       E++  YH+GE V   +  +L+        G   ++++ T++G IG++    
Sbjct: 1081 LLNGASQKAEIIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFT 1133

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
             HE + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   
Sbjct: 1134 SHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDPH 1188

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            +   +++ ++ +  E+ K++E++
Sbjct: 1189 KQKSVAEELDRTPPEVSKKLEDI 1211


>gi|429859776|gb|ELA34542.1| pre-mRNA-splicing factor rse1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1212

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 205/813 (25%), Positives = 359/813 (44%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIDSMNPLLDCKVANLTGEDAPQIYTACGNGARSTFRMLKHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ S  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLSRGDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  AT N  QV +A   G +VY E+ GDG
Sbjct: 534  GLIQVHPKGIRHIRHGQI---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDGDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VR+ SL PD  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPDSTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+
Sbjct: 650  ALTAPPSSLAIIAMDDSSSGGSALYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + YS    +  + + +N  ++  +  F+S    + +   
Sbjct: 710  RLFQVTVQGRTCVIGLSSRPWLGYSDPITRGFVVTPLNYVDLEWVWNFSSEQCEEGVVGI 769

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  I+++   +  +SIPL   PRR+        F      N +   +     + 
Sbjct: 770  QGQSLRIFAIENLGDTITQKSIPLTYTPRRLLKHPDHPMFYTVESDNNTLPPDLRAKLIA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                      +L    F +                       + T  LD  E   S    
Sbjct: 830  EPGVVNGDATVLPPDEFGYPKGKGRWASCISVIDPLSEEQRVLQTVDLDDNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNA 516
            SF S D+  +  VGT   ++    + T+G I V+   EDG +L+ I + + +    +L A
Sbjct: 890  SFASQDNENFLIVGTGKDMIVNPRQFTEGYIHVYRFGEDGHELEFIHKTKVEEPPTALLA 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G+LLA + + +++Y   LR    R+ Q++       L + + T+G  IVVGD+   ++
Sbjct: 950  FQGRLLAGVGKTLRIYDLGLR-QMLRKSQADVAPQ---LIVSLSTQGSRIVVGDVQHGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK     +     D  A W++   ++D +   G +   N+F VR   K S+ A +E+
Sbjct: 1006 YVVYKPTTNKLIPFVDDTIARWVTCTTMVDYESVAGGDKFGNMFLVRCPEKASQEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL ++   +  +        SLV       VG    +++  +N
Sbjct: 1066 AGLHLLNTRDYLHGAPHRLNLLSHSYTQDVPTSITKTSLV-------VGGQDVLLWSGIN 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ ++R     + G +H  +R +      V  K  +DGDL
Sbjct: 1119 GTIGVFIPFVTREDVDFFQNLEQHMRTEDAPLAGRDHLMYRGY-----YVPVKGVIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYTLLPNDKKLMIAGELDRSVREIERKISDI 1206


>gi|302680006|ref|XP_003029685.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
 gi|300103375|gb|EFI94782.1| hypothetical protein SCHCODRAFT_58785 [Schizophyllum commune H4-8]
          Length = 1213

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 200/812 (24%), Positives = 349/812 (42%), Gaps = 96/812 (11%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++L       Q+    G     SLR +R+G+ + E  S +L GI   +W+
Sbjct: 417  SLDPIIDSKVLNLMPNSDTPQIFAACGRGPRSSLRTLRHGLEVEESVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +   DD FD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKKKEDDAFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V S  R   NEW+ P G S+  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPQGIRHVLSDRRV--NEWRVPQGKSIVQATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII 267
            +  + +   +  L I  + E    +   AVG   D +VRI SL P+  L T         
Sbjct: 593  QDRKAMGSTVLALSIGEVPEGRQRTPFLAVGC-EDQTVRIISLDPESTLDTISLQALTAP 651

Query: 268  PRSVLLCAF--------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            P S+ +               ++   L +G LL  +L+  TG+LTD +   LGT+P+ L 
Sbjct: 652  PSSICIAEMLDAAINKTHPTMFVNIGLQNGVLLRTVLDPMTGQLTDTRTRFLGTRPVKLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
              + +    + A S R  + Y+    + ++ +  + +     F++   P+ L       L
Sbjct: 712  RVAIQRNPAIMALSSRSWLNYTHQNMVHFTPLIFENLDFAWSFSAELSPEGLIGITGSVL 771

Query: 380  TIGTIDDIQ-KLHIRSIPLGEHPR------------------RICHQEQSRTFAICSLKN 420
             I  I  +  KL   S+PL   PR                  R+   E +R   +  +  
Sbjct: 772  RIFQIPKLGVKLKQDSLPLSYTPRKFITHPNNHYFYMIESDHRVYGDETAREKILDQMSR 831

Query: 421  QSCAEESEMHF------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                +E  ++                   +R++D      ++  PLD  E   SI    F
Sbjct: 832  GKAVDEDVVNLPVTEFGRVKAPAGTWGSCIRIIDPTQNSTVAVIPLDNNEAAFSIAVVPF 891

Query: 463  S-DDSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S  +  ++  VGTA    V P        R   F  +   L+L  + ET     +L AF 
Sbjct: 892  SARNGELFLVVGTAANTRVSPRTCSSGYLRTYQFTNDGAGLELHHKTETDDVPLALLAFQ 951

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH-ILALYVQTRGDFIVVGDLMKSISL 577
            G+L A + + +++Y     D G ++L  +  + G     + + T+G  I+ GD+ +S+  
Sbjct: 952  GRLAAGVGKALRIY-----DIGKKKLLRKAENKGFGTTIVTLNTQGSRIIAGDMQESLFY 1006

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEER 634
             +YK  E  +   A D    W+SA  ++D       +   N+F  R   K SE   D+  
Sbjct: 1007 AVYKAPENRLLVFADDSQPRWISAATMVDYYTVAAGDRFGNVFVNRLDYKVSEQVDDDPT 1066

Query: 635  G---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
            G               + +++  +H+G+ +      +LV        G    +++  ++G
Sbjct: 1067 GAGILHEKGILMGAPHKTKLLCHFHVGDLITSIHKVALV-------AGGREVLLYTGLHG 1119

Query: 680  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL 
Sbjct: 1120 TIGMLVPFVSKEDVDFISTLEQHMRSEQSSLVGRDHLSWRGY-----YVPVKAVVDGDLC 1174

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E+F  L  ++   I+  ++ +V E+ K+++ L
Sbjct: 1175 ETFAKLPASKQSAIANELDRTVGEVLKKLDSL 1206


>gi|223647430|gb|ACN10473.1| Splicing factor 3B subunit 3 [Salmo salar]
          Length = 1217

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 205/863 (23%), Positives = 373/863 (43%), Gaps = 130/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   NL PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQENLSPIMSCQIADLANEDTPQLYVACGRGPK 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKEDELGVKGTVGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                VRL++      +    L+  E   S+  C F+     +Y 
Sbjct: 846  NLPEAIFGAPKAGSGQWASLVRLVNPIQGTTLDLVQLEQNEAAFSVTVCRFASGGEDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G I  + +  G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVARDMILNPRSVGGGFIYTYRLGGGGDKLEFMHKTPVEDVPLAIAPFQGRVLVGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G ++L  +C   H   L   + T G  ++V D+ +S+  + YK  E  
Sbjct: 966  LLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYKRNENQ 1020

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERG 635
            +   A D +  W++   +LD D    A+   N+  VR   N+    DE         +RG
Sbjct: 1021 LIIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG 1080

Query: 636  RL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 687
             L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++    
Sbjct: 1081 LLNGASQKAEVIMNYHIGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFT 1133

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
             HE + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   
Sbjct: 1134 SHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDPH 1188

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            +   +++ ++ +  E+ K++E++
Sbjct: 1189 KQKSVAEELDRTPPEVSKKLEDI 1211


>gi|224109600|ref|XP_002315251.1| predicted protein [Populus trichocarpa]
 gi|222864291|gb|EEF01422.1| predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 208/857 (24%), Positives = 372/857 (43%), Gaps = 135/857 (15%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP    + V + ++  +L PI+D  V +L  +   Q+ +  G     SLRI+R G+ I+
Sbjct: 385  FQPRGLKNLVRI-DQVESLMPIMDMKVANLFDEETPQIFSLCGRGPRSSLRILRPGLAIS 443

Query: 76   EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A  +L G+   +W+++ +  D FD ++VVSF + T +L++   + +EE    GF   T
Sbjct: 444  EMAVSQLPGVPSAVWTVKKNIYDEFDAYIVVSFNNATLVLSIG--ETVEEVSDSGFLDTT 501

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+Q+    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 502  PSLAVSLIGDDSLMQIHPNGIRHIREDGR--INEWRTPAKRTIVKVGSNRLQVVIALSGG 559

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+  ++  +++CLDI P+ E    S+  AVG + D ++R+ SL P
Sbjct: 560  ELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DNTIRVLSLDP 618

Query: 253  D--LNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
            D  + +++ + +     P S+L    +               +L   L  G L   +++M
Sbjct: 619  DDCMQILSVQSVSAP--PESLLFLEVQASIGGEDGADHPASLFLNAGLQTGVLFRTVVDM 676

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             TG+L+D +   LG +   L + + +    +   S RP + Y      L + ++ + + +
Sbjct: 677  VTGQLSDSRSRFLGLRAPKLFSINVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEY 736

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC- 416
               F+S    + +       L I TI+ + +  +  +IPL   PR+   Q + +   I  
Sbjct: 737  AASFSSDQCAEGVVSVAGDALRIFTIERLGETFNETAIPLRYTPRKFVLQPKRKLLVIIE 796

Query: 417  -----------SLKNQSCAEESEM------------------------------------ 429
                           + C E S M                                    
Sbjct: 797  SDQGAYTAEEREAAKKECFEASGMGENGSASAEQMENGDDDDKDDPLSDEQYGYPKAESD 856

Query: 430  ---HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPT 485
                 +R+LD ++        L   E   S+ + +F D +      VGTA  L  +  P 
Sbjct: 857  KWVSCIRVLDPRSAATTCLLELQDNEAAFSLCTVNFHDKEHGTLLAVGTAKGL--QFWPK 914

Query: 486  KGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
            +  +  FI     V+DGK L+L+ + + +G   +L  F G+LLA I   ++LY     D 
Sbjct: 915  RSLVTGFIHIYKFVDDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DL 969

Query: 540  GTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            G + L  +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D   
Sbjct: 970  GKKRLLRKCENKLFPNTIVSIH--TYRDRIYVGDIQESFHFCKYRRDENQLYIFADDSVP 1027

Query: 597  NWMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLE 638
             W+++   +D D   GA+   N++  R                  K  +G  +    ++E
Sbjct: 1028 RWLTSSYHVDFDSMAGADKFGNIYFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVE 1087

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEK 697
             + ++H+G+ VN  +  SL+        G    +I+GTV G +G +      +   F   
Sbjct: 1088 EIVQFHIGDVVNSLQKASLI-------PGGGECIIYGTVMGSVGALLPFTSRDDVDFFSH 1140

Query: 698  LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEIS 753
            L+ +LR+    + G +H  +RS          K+ +DGDL E F    LD  R   DE+ 
Sbjct: 1141 LEMHLRQDHPPLCGRDHMSYRS-----AYFPVKDVIDGDLCEQFPTLPLDAQRKIADELD 1195

Query: 754  KTMNVSVEELCKRVEEL 770
            +T      E+ K++EE+
Sbjct: 1196 RTPG----EILKKLEEV 1208


>gi|73957045|ref|XP_536791.2| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Canis lupus
            familiaris]
 gi|149699332|ref|XP_001500880.1| PREDICTED: splicing factor 3B subunit 3 [Equus caballus]
 gi|301771131|ref|XP_002920989.1| PREDICTED: splicing factor 3B subunit 3-like [Ailuropoda melanoleuca]
 gi|344290794|ref|XP_003417122.1| PREDICTED: splicing factor 3B subunit 3-like [Loxodonta africana]
 gi|410983914|ref|XP_003998280.1| PREDICTED: splicing factor 3B subunit 3 [Felis catus]
 gi|426242169|ref|XP_004014947.1| PREDICTED: splicing factor 3B subunit 3 [Ovis aries]
 gi|417406150|gb|JAA49749.1| Putative damage-specific dna binding complex subunit ddb1 [Desmodus
            rotundus]
 gi|431912451|gb|ELK14585.1| Splicing factor 3B subunit 3 [Pteropus alecto]
          Length = 1217

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 379/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+  + +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|348572800|ref|XP_003472180.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 3-like
            [Cavia porcellus]
          Length = 1215

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 213/867 (24%), Positives = 375/867 (43%), Gaps = 140/867 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+    
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVSPGEQRSRFPGC 607

Query: 239  GMWTDISVRIFSLPD--LNLITKEHLGGEIIPRSVLLCAFE----------------GIS 280
            G+WT    RI S P   L  ++ + L  +  P S  LC  E                G  
Sbjct: 608  GLWT--YCRIISDPSDCLQPLSMQALPAQ--PES--LCIVEMGGTEKQDELGERGSIGFL 661

Query: 281  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 340
            YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + Y
Sbjct: 662  YLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSY 721

Query: 341  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGE 399
            S   +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL  
Sbjct: 722  SYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQY 781

Query: 400  HPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM----- 429
             PR+ + H E +            T A  + + Q  AEE             +EM     
Sbjct: 782  TPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFL 841

Query: 430  --------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 469
                                  +R+++      +    L+  E   S+  C FS+    +
Sbjct: 842  NENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDW 901

Query: 470  YC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAI 525
            Y  VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  +
Sbjct: 902  YVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGV 961

Query: 526  NQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKH 582
             + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK 
Sbjct: 962  GKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKR 1014

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE-------- 632
             E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE        
Sbjct: 1015 NENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKAL 1074

Query: 633  -ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
             +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++
Sbjct: 1075 WDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGIL 1127

Query: 685  ASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
                 HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  
Sbjct: 1128 VPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNS 1182

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEEL 770
            +   +   +S+ ++ +  E+ K++E++
Sbjct: 1183 MEPNKQKNVSEELDRTPPEVSKKLEDI 1209


>gi|6006515|emb|CAB56791.1| spliceosomal protein SAP 130 [Homo sapiens]
          Length = 1217

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|109129162|ref|XP_001107025.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Macaca
            mulatta]
 gi|297284421|ref|XP_002802591.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Macaca
            mulatta]
          Length = 1199

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 366  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 413

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 414  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 471

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 472  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 529

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 530  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 589

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 590  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 646

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 647  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 706

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 707  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 766

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 767  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 826

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 827  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 886

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 887  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 946

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 947  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 999

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1000 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1059

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1060 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1112

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1113 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1167

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1168 EPNKQKNVSEELDRTPPEVSKKLEDI 1193


>gi|255081708|ref|XP_002508076.1| predicted protein [Micromonas sp. RCC299]
 gi|226523352|gb|ACO69334.1| predicted protein [Micromonas sp. RCC299]
          Length = 1199

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 193/818 (23%), Positives = 353/818 (43%), Gaps = 107/818 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L P++D    +L  +   Q+    G     +LR++R G+ ++E A   L G    ++++
Sbjct: 404  SLCPVLDMQCHNLVAEETPQLYALCGTGPRSTLRVLRQGVALSEMAVSPLPGNPNAVFTV 463

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R S  D FD ++VVSF + T +L++   + +EE    GF     TL       + L+QV 
Sbjct: 464  RKSASDEFDAYIVVSFTNATLVLSIG--ETVEEVSDSGFLGTVPTLSASLLGDDSLLQVH 521

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
             G +R + +  R   NEW++P   +V   T NA QV++A  GG L+Y E+   G L EV+
Sbjct: 522  PGGLRHIRADKR--INEWRTPGRKTVTRVTTNARQVIIALSGGELIYFELDQTGQLMEVE 579

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII--- 267
              +   +++CLDI P+ E    ++  AVG + D +VRI SL   + +  + +G + +   
Sbjct: 580  KLETSGDVACLDIGPVPEGHLRNRFLAVGSF-DSTVRILSLGAEDCL--QTMGVQALAAA 636

Query: 268  PRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 325
            P S+L+   +G    YL   L +G LL   ++  TG+L+D +   LG +P  L   S + 
Sbjct: 637  PNSLLMLRDDGSGSIYLNVGLTNGVLLRADVDSVTGQLSDTRARFLGARPPKLSAVSVQG 696

Query: 326  TTHVFAASDRPTV-IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 384
               + A S RP +  +    +   S ++ + + H  PF+S A P+ +       L I  +
Sbjct: 697  KAAMMALSSRPWLGHFDLANRFALSPLSYEPLEHAAPFSSDACPEGVVAVAGNTLRIVAV 756

Query: 385  DDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-------------SLKNQSCAEESEMH 430
            + + ++ + R+  L   PR++       T A+               L+  +  ++++M 
Sbjct: 757  ERLGEQFNQRTCKLRYTPRQMSVNVDRNTLAVVECDQSSVPYDERTGLEGAAGEKDTKMD 816

Query: 431  F---------------------------------VRLLDDQTFEFISTYPLDTFEYGCSI 457
                                              VR++D  +        +   E     
Sbjct: 817  VEGEEDDEEEDEVTMTPAEQFGAPKAPPGSWASCVRIVDPASASTKQIVEMTGNEAALCC 876

Query: 458  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI--LVFIVEDGKLQLIAEKETKGAVYSLN 515
                F     ++  VG+A  L      ++G    L    +DG ++L  +    G   ++ 
Sbjct: 877  CHVYFPQADELFLAVGSAVSLTFSPRDSEGGFIHLYRYTQDGGIELFHKTPLDGVPGAMC 936

Query: 516  AFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
             F G+LL  +   ++LY    K +LR    R   +            +  +G+ I VGD+
Sbjct: 937  GFKGRLLVGVGNTLRLYDFGKKKLLRKVENRNFPN--------FIKTIHAQGERIYVGDV 988

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-------- 623
             +S   + YK E+G++   A D     ++A   LD D   G +   N+F  R        
Sbjct: 989  QESFHYVRYKREDGSMYIVADDVQPRHVTAACPLDYDTIAGGDRFGNVFVSRLAQDVSDE 1048

Query: 624  ----------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
                         +GA +    ++  V ++H+GE V     G+L         G + ++I
Sbjct: 1049 IEEDPTGGKTAYGQGALNGASHKINQVTQFHVGETVCALTKGTL-------QAGGLESMI 1101

Query: 674  FGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            + T+ G +G +    + E   F   L+ ++R+ +  + G +H  +RS          K+ 
Sbjct: 1102 YATLMGTLGALMPFGNREDVDFCTHLEMHMRQELPPLLGRDHLAFRS-----SYFPVKDV 1156

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL E +  L       +++ M+ +V E+ K++E+L
Sbjct: 1157 IDGDLCEMYTVLPHEAQRRVAEDMDRTVSEVLKKLEDL 1194


>gi|443694993|gb|ELT96001.1| hypothetical protein CAPTEDRAFT_155561 [Capitella teleta]
          Length = 1215

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 202/863 (23%), Positives = 380/863 (44%), Gaps = 134/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L +           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFAPRPLKNLVM-----------VDEMDSLSPIMHCQIADLANEDTPQLFAMCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++ + +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRNIEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQ+    +R + S  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRSDKR--VNEWKTPGKKTIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  +L  ++ C+ +  +       +  AVG
Sbjct: 549  VNQRQVVIALSGGELVYFEMDPTGQLNEYTERKELSSDVVCMGLGRVPSGEQRCRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLC------AFEGIS--------YLLC 284
            +  D +VRI SL   + ++   L  + +P S   LC      A EG          +L  
Sbjct: 609  L-NDNTVRIISLDPTDCLSP--LSMQALPASPESLCIVEMGGAVEGQEEAHINHGLFLNI 665

Query: 285  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 344
             L +G LL  +L+  TG+L+D +   LG++P+ L   S + +  V A S R  + Y+   
Sbjct: 666  GLQNGVLLRAVLDNVTGDLSDTRTRYLGSRPVKLFRISMQGSDSVLAMSSRSWLSYTYQN 725

Query: 345  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR 403
            +   + ++   + +   F S   P+ +       L I  ++ +  +  + SIPL   PR+
Sbjct: 726  RFHLTPLSYDTLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVSIPLQYTPRK 785

Query: 404  -ICHQEQSRTFAICSLKN-----------QSCAEE-------------SEMHF------- 431
             + H E      I S  N           Q  AEE             +EM         
Sbjct: 786  FVIHAETGNVIVIESDHNAYTEDTKQQRKQQMAEEMVEAAGEEEQQLAAEMAAAFLQENL 845

Query: 432  ------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VYYCV 472
                              +++++    + +   PL+  E   S+    F++  +  +  V
Sbjct: 846  PEDVFGAPKAGNGMWASQIQIMNPINGKTLCKLPLEQNEAAFSVSIVRFANHGDEAFVLV 905

Query: 473  GTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            GT   ++      + G IL F   +    L+L+          ++ AF G++L  + + +
Sbjct: 906  GTVKDLVLSPRSCSCGYILCFRFTNNYEGLELLHRTPVDDVPAAIAAFQGRVLIGVGRHL 965

Query: 530  QLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
            ++Y     D G +++  +C +      + A++V   G+ I+V D+  S   + YK  E  
Sbjct: 966  RIY-----DLGKKKMLRKCENKFLPNFVTAIHVN--GNRIMVSDIQDSFHFVRYKRHENQ 1018

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ER 634
            +   A D    W++   +LD +   GA+   N+  VR  S  ATD+            +R
Sbjct: 1019 LIVFADDTCPRWLTCSCMLDYNTMAGADKFGNICVVRLPS-NATDDVDEDPTGNKALWDR 1077

Query: 635  GRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
            G L       + +  +H+GE +   +  +L+        G   ++++ T++G +G++   
Sbjct: 1078 GSLNGASQKADSIANFHVGEMITSLQKATLI-------PGGSESLVYTTLSGSLGMLVPF 1130

Query: 688  -PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
              HE + F + L+ ++R  ++ + G +H  +RS+         +N +DGDL E F  +  
Sbjct: 1131 SSHEDHDFFQHLEMHMRSEVQSLCGRDHLAYRSY-----YFPVRNVIDGDLCEMFTSMDV 1185

Query: 747  TRMDEISKTMNVSVEELCKRVEE 769
            +R  +IS+ ++ +  E+ K++E+
Sbjct: 1186 SRQKQISEELDRTPAEVSKKLED 1208


>gi|149640712|ref|XP_001506454.1| PREDICTED: splicing factor 3B subunit 3 [Ornithorhynchus anatinus]
 gi|395508661|ref|XP_003758628.1| PREDICTED: splicing factor 3B subunit 3 [Sarcophilus harrisii]
          Length = 1217

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 214/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGAEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 VR+++      +    L+  E   S+  C FS+  + +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V  G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|197246825|gb|AAI68883.1| Sf3b3 protein [Rattus norvegicus]
          Length = 908

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
           TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 75  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 122

Query: 62  DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 123 RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 180

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 181 TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 238

Query: 181 TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 239 AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 298

Query: 239 GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
           G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 299 GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 355

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 356 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 415

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 416 YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 475

Query: 401 PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
           PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 476 PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 535

Query: 430 -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 536 ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 595

Query: 471 C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
             VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 596 VLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 655

Query: 527 QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
           + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 656 KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 708

Query: 584 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
           E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 709 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 768

Query: 633 ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
           +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 769 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 821

Query: 686 SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
               HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 822 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 876

Query: 745 SRTRMDEISKTMNVSVEELCKRVEEL 770
              +   +S+ ++ +  E+ K++E++
Sbjct: 877 EPNKQKNVSEELDRTPPEVSKKLEDI 902


>gi|40788938|dbj|BAA32662.2| KIAA0017 protein [Homo sapiens]
          Length = 1253

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 420  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 467

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 468  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 525

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 526  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 583

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 584  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 643

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 644  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 700

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 701  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 760

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 761  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 820

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 821  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 880

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 881  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 940

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 941  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 1000

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 1001 KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1053

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1054 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1113

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1114 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1166

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1167 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1221

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1222 EPNKQKNVSEELDRTPPEVSKKLEDI 1247


>gi|395836972|ref|XP_003791420.1| PREDICTED: splicing factor 3B subunit 3 [Otolemur garnettii]
          Length = 1217

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEEWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|334313376|ref|XP_003339894.1| PREDICTED: splicing factor 3B subunit 3-like [Monodelphis domestica]
          Length = 1202

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 214/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 369  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 416

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 417  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 474

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 475  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 532

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 533  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 592

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 593  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGAEKQDELGERGSIGFLY 649

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 650  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 709

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 710  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 769

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 770  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 829

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 VR+++      +    L+  E   S+  C FS+  + +Y
Sbjct: 830  ENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWY 889

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V  G KL+ + +   +    ++  F G++L  + 
Sbjct: 890  VLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 949

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 950  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1002

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1003 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1062

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1063 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1115

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1116 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1170

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1171 EPNKQKNVSEELDRTPPEVSKKLEDI 1196


>gi|158256968|dbj|BAF84457.1| unnamed protein product [Homo sapiens]
          Length = 1217

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|409075182|gb|EKM75565.1| hypothetical protein AGABI1DRAFT_64324 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1213

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 200/815 (24%), Positives = 358/815 (43%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++L       Q+    G     SLR +++G+ + E  S +L GI   +W+
Sbjct: 417  SLDPIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             + + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKRNEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P   ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADRRV--NEWRVPSNKTIVAATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                     + A S R  + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 712  RVLIHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVL 771

Query: 380  TIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAIC-----------------SLKNQ 421
             I  +  +  KL   SIPL   PR+      +  F +                   L+ Q
Sbjct: 772  RIFHVPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMGQDAVDKKLNELRQQ 831

Query: 422  SCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
            + A + E+                     +R++D    + IS  PLD  E   S+    F
Sbjct: 832  NRAIDQEVLNLSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGNESAFSLAVVPF 891

Query: 463  SDDSN-VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S   N ++  VGTA    + P        R+  F+ +  +L+L+ + E      +L AF 
Sbjct: 892  SAKGNELHLVVGTAADTKLSPRTCSTGFLRVYKFLEDGRQLELVHKTEIDDVPLALMAFQ 951

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G+L+A + + +++Y    K MLR    ++  S          + + T+G  I+VGD+ +S
Sbjct: 952  GRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAI--------VTLSTQGSRILVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDE 632
            I   +YK  E  +   A D    W+SA  ++D +  + A+   N+F  R +   +   DE
Sbjct: 1004 IFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSDQVDE 1063

Query: 633  ---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
                     E+G       + +++  +H+G+ +      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLV-------AGGREVLLYTG 1116

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1117 LHGTIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGY-----YVPVKAVVDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E +  L  ++   I+  ++ S+ E+ K++E+L
Sbjct: 1172 DLCEMYAKLPGSKQSAIAGELDRSIGEVLKKLEQL 1206


>gi|449546293|gb|EMD37262.1| hypothetical protein CERSUDRAFT_83017 [Ceriporiopsis subvermispora B]
          Length = 1213

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 195/811 (24%), Positives = 357/811 (44%), Gaps = 94/811 (11%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L P+VD  V++L       Q+ T  G     S R++R+G+ + E  S +L GI   +W+
Sbjct: 417  SLSPVVDSKVMNLLPNSDTPQIFTACGRGPRSSFRMLRHGLDVEEVVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +   DDP+D+++++SF++ T +L +   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKLKEDDPYDSYIILSFVNGTLVLCIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADKRV--NEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSIAEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLDTISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +  +++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDAGINKTQQTTFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLI 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                +    + A S RP + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 712  RVLVQRNPGILALSSRPWLNYTHQNLMHFTPLIFENLDYAWSFSAELCPEGLIGISGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV------ 432
             I  I  +  KL   +IPL   PR+      +    +    ++   E++    +      
Sbjct: 772  RIFHIPKLGTKLKQDAIPLLYTPRKFIPHPTNSLLYMIEGDHRVMGEDAAARKLDELRQK 831

Query: 433  -RLLDDQTFEF-----------------------------ISTYPLDTFEYGCSILSCSF 462
             R +DD+  +                              ++   LD  E   S+    F
Sbjct: 832  GREIDDEVVQLPPELFGRPKAPAGTWASCIRIINPVDAKTVNVIHLDNNEMAFSLAVVPF 891

Query: 463  -SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
             +    ++  VGTA   ++ P        R   F  +   L+L+ + ET     ++ AF 
Sbjct: 892  AARGGELHLVVGTAQDTFLTPRSCTSGFLRTYRFSDDGQNLELLHKTETNDVPLAVMAFQ 951

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            GKL+A + + +++Y  M +    R+++++      I+AL+  T+G  I VGD+ +S+   
Sbjct: 952  GKLVAGVGKSLRIYD-MGKKKLLRKVENKT-FSAAIVALH--TQGSHIYVGDMQESVFYA 1007

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG 635
            +YK  E  +   A D    W++A+ ++D +    A+   N+F  R   K SE   D+  G
Sbjct: 1008 VYKAPENRLLVFADDTQPRWITAMTMIDYNTVAAADRFGNVFVNRLDPKVSEQVDDDPTG 1067

Query: 636  ---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
                           +  ++  +H+G+ +      +LV        G    +++  ++G 
Sbjct: 1068 AGILHEKSILFGAPHKTSMLAHFHVGDLITSINKVALV-------AGGREVLLYTGLHGT 1120

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DGDL E
Sbjct: 1121 IGILMPFVSKEDVDFISTLEQHMRTEQLSLVGRDHLTWRGY-----YVPVKAVVDGDLCE 1175

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +F  L  ++   I+  ++ +V E+ K++E+L
Sbjct: 1176 TFARLPASKQSAIAGELDRTVGEVLKKLEQL 1206


>gi|46362557|gb|AAH68974.1| Splicing factor 3b, subunit 3, 130kDa [Homo sapiens]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|54112121|ref|NP_036558.3| splicing factor 3B subunit 3 [Homo sapiens]
 gi|118150814|ref|NP_001071319.1| splicing factor 3B subunit 3 [Bos taurus]
 gi|296231541|ref|XP_002761182.1| PREDICTED: splicing factor 3B subunit 3 isoform 2 [Callithrix
            jacchus]
 gi|332846357|ref|XP_511081.3| PREDICTED: splicing factor 3B subunit 3 [Pan troglodytes]
 gi|397518709|ref|XP_003829523.1| PREDICTED: splicing factor 3B subunit 3 [Pan paniscus]
 gi|402908991|ref|XP_003917214.1| PREDICTED: splicing factor 3B subunit 3 [Papio anubis]
 gi|403298333|ref|XP_003939977.1| PREDICTED: splicing factor 3B subunit 3 [Saimiri boliviensis
            boliviensis]
 gi|426382761|ref|XP_004057969.1| PREDICTED: splicing factor 3B subunit 3 [Gorilla gorilla gorilla]
 gi|116242787|sp|Q15393.4|SF3B3_HUMAN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=STAF130; AltName:
            Full=Spliceosome-associated protein 130; Short=SAP 130
 gi|125987788|sp|A0JN52.1|SF3B3_BOVIN RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|117306205|gb|AAI26519.1| Splicing factor 3b, subunit 3, 130kDa [Bos taurus]
 gi|119572190|gb|EAW51805.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_c [Homo sapiens]
 gi|168274284|dbj|BAG09562.1| splicing factor 3B subunit 3 [synthetic construct]
 gi|296478233|tpg|DAA20348.1| TPA: splicing factor 3B subunit 3 [Bos taurus]
 gi|355710371|gb|EHH31835.1| Spliceosome-associated protein 130 [Macaca mulatta]
 gi|355756944|gb|EHH60552.1| Spliceosome-associated protein 130 [Macaca fascicularis]
 gi|380811142|gb|AFE77446.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|383417057|gb|AFH31742.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|384946118|gb|AFI36664.1| splicing factor 3B subunit 3 [Macaca mulatta]
 gi|410209986|gb|JAA02212.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410260956|gb|JAA18444.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
 gi|410355121|gb|JAA44164.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|193786710|dbj|BAG52033.1| unnamed protein product [Homo sapiens]
          Length = 897

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
           TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 64  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQMADLANEDTPQLYVACGRGP 111

Query: 62  DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 112 RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 169

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 170 TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 227

Query: 181 TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 228 AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 287

Query: 239 GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
           G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 288 GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 344

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 345 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 404

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 405 YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 464

Query: 401 PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
           PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 465 PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 524

Query: 430 -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 525 ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 584

Query: 471 C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
             VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 585 VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 644

Query: 527 QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
           + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 645 KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 697

Query: 584 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
           E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 698 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 757

Query: 633 ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
           +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 758 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 810

Query: 686 SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
               HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 811 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 865

Query: 745 SRTRMDEISKTMNVSVEELCKRVEEL 770
              +   +S+ ++ +  E+ K++E++
Sbjct: 866 EPNKQKNVSEELDRTPPEVSKKLEDI 891


>gi|19527174|ref|NP_598714.1| splicing factor 3B subunit 3 [Mus musculus]
 gi|297207121|ref|NP_001099657.2| splicing factor 3B subunit 3 [Rattus norvegicus]
 gi|354477789|ref|XP_003501101.1| PREDICTED: splicing factor 3B subunit 3 [Cricetulus griseus]
 gi|81879817|sp|Q921M3.1|SF3B3_MOUSE RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|15030278|gb|AAH11412.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|26353236|dbj|BAC40248.1| unnamed protein product [Mus musculus]
 gi|27503728|gb|AAH42580.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|148679525|gb|EDL11472.1| splicing factor 3b, subunit 3 [Mus musculus]
 gi|187951307|gb|AAI39016.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|187954163|gb|AAI39017.1| Splicing factor 3b, subunit 3 [Mus musculus]
 gi|344248014|gb|EGW04118.1| Splicing factor 3B subunit 3 [Cricetulus griseus]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|197101659|ref|NP_001125500.1| splicing factor 3B subunit 3 [Pongo abelii]
 gi|75042033|sp|Q5RBI5.1|SF3B3_PONAB RecName: Full=Splicing factor 3B subunit 3; AltName:
            Full=Pre-mRNA-splicing factor SF3b 130 kDa subunit;
            Short=SF3b130; AltName: Full=Spliceosome-associated
            protein 130; Short=SAP 130
 gi|55728259|emb|CAH90875.1| hypothetical protein [Pongo abelii]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALR 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVTKKLEDI 1211


>gi|392593521|gb|EIW82846.1| hypothetical protein CONPUDRAFT_81012 [Coniophora puteana RWD-64-598
            SS2]
          Length = 1213

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 201/815 (24%), Positives = 360/815 (44%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++ L      Q+ T  G     + R++R+G+ + E  S EL GI   +W+
Sbjct: 417  SLDPILDAKVMNILPNSDTPQIFTACGRGSRSTFRMLRHGLEVEESVSSELPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             + + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKRTEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V S  R   NEW+ P G ++  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPQGIRHVLSDRRV--NEWRVPQGKTIVCATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L +  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDWKAMGSTVLALSVGEVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDASINKSQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIRLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
              + +    + A S R  + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 712  RVTVQKNPGILALSSRSWLNYTHQSLMHFTPLIFENLDYAWSFSAELSPEGLIGITGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS---LKNQSCAEES--EMH-- 430
             I  I  +  KL   ++PL   PR+ + H      + I     + ++S AE+   EM   
Sbjct: 772  RIFQIPKLGMKLKQDAVPLSYTPRKFVSHPANQYLYLIQGDHRVMSESAAEKKLQEMRTK 831

Query: 431  ---------------FVR-------------LLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                           F R             ++D      I T  LD  E   S+    F
Sbjct: 832  GQKVDEEILQLPVEVFGRPKAPAGTWASAICIIDPIEARTIHTVELDNNESAFSVAVVPF 891

Query: 463  -SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
             + D+ ++  VGTA    + P        R   F  E   L+L+ + ET     ++ AF 
Sbjct: 892  AARDNELHLVVGTAADTLLTPRSCRSGYLRTYRFTDEGRSLELLHKTETDDVPLAVMAFQ 951

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G+L+A + + ++LY    K +LR    +   S          + + T+G  I+VGD+ +S
Sbjct: 952  GRLIAGVGKSLRLYEIGKKKLLRKAENKSFASAI--------VTLNTQGSRIIVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATD 631
            +    YK  E  +   A D    W++A+ ++D       +   N+F  R   + S+   D
Sbjct: 1004 VHFAAYKAPENRLLIFADDMQPRWVTALTMVDYTTIAVGDRFGNVFINRLDMRVSDQVDD 1063

Query: 632  E--------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
            +        E+G+L       +++  +H+G+ +      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGQLSGAPHKTKLLCHFHVGDLITSIHKVSLV-------AGGREVLLYTG 1116

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IG++   +  E   F+  L+ ++R     + G +   WR +    K V     +DG
Sbjct: 1117 IHGTIGILVPFVSKEDVDFISTLEQHMRSEQSSLVGRDQLSWRGYYTPVKAV-----VDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E+F  L+ ++   I+  ++ +V E+ K++E+L
Sbjct: 1172 DLCEAFARLTGSKQSAIAGELDRTVGEVLKKLEQL 1206


>gi|332263858|ref|XP_003280968.1| PREDICTED: splicing factor 3B subunit 3 [Nomascus leucogenys]
          Length = 1271

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 438  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 485

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 486  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 543

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 544  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 601

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 602  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 661

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 662  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 718

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 719  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 778

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 779  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 838

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 839  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 898

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 899  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 958

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 959  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 1018

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 1019 KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1071

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1072 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1131

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1132 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1184

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1185 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1239

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1240 EPNKQKNVSEELDRTPPEVSKKLEDI 1265


>gi|410297890|gb|JAA27545.1| splicing factor 3b, subunit 3, 130kDa [Pan troglodytes]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 213/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio]
 gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]
          Length = 1217

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 203/863 (23%), Positives = 373/863 (43%), Gaps = 130/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQESLSPIMSCQIADLANEDTPQLYVACGRGPG 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIIRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGEKGTICFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                VRL++      +    L+  E   S+  C F +  + +Y 
Sbjct: 846  NLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAICRFLNGGDDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G I  + +  G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G ++L  +C   H   L   + T G  ++V D+ +S+  + Y+  E  
Sbjct: 966  LLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ 1020

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERG 635
            +   A D    W++   +LD D    A+   N+  VR   N+    DE         +RG
Sbjct: 1021 LIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG 1080

Query: 636  RL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 687
             L       E++  YH+GE V   +  +L+        G   ++++ T++G IG++    
Sbjct: 1081 LLNGASQKAEIIINYHIGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFT 1133

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
             HE + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   
Sbjct: 1134 SHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDPH 1188

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            +   +S+ ++ +  E+ K++E++
Sbjct: 1189 KQKSVSEELDRTPPEVSKKLEDI 1211


>gi|312072035|ref|XP_003138882.1| hypothetical protein LOAG_03297 [Loa loa]
 gi|307765956|gb|EFO25190.1| hypothetical protein LOAG_03297 [Loa loa]
          Length = 1197

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 198/843 (23%), Positives = 377/843 (44%), Gaps = 111/843 (13%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L            V+++  +L P++   + DL  +   Q+ T  G    
Sbjct: 385  TFFFAPRGLTNL-----------AVVDQMDSLSPLISSYIDDLANEDSPQIYTLIGRGAL 433

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +++++RNG+ + E A  EL G    +W+++ + DD FD+ +VVSF++ T +L++   + 
Sbjct: 434  SAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKFDSHIVVSFVNATLVLSIG--ET 491

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + L+QV    +R + +  R   NEWK+P   ++    
Sbjct: 492  VEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHIRADRRV--NEWKAPGKRTIMKCA 549

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV +A  GG LVY E+   G L E  +  +L  ++ C+ ++ I E    S+   VG
Sbjct: 550  LNRRQVAIALAGGELVYFELDVTGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLTVG 609

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS-------YLLCALGDG 289
            +  D +VRI SL     L+ ++ + L  E  P S+++    G         +L   L +G
Sbjct: 610  L-ADKTVRIISLDPQDCLSPLSMQALPSE--PESIIVLEMFGTETQSASTVHLNIGLQNG 666

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
             LL   ++  TGELTD +   LGT+ + L     ++   + AAS R  ++Y    +   +
Sbjct: 667  CLLRTTVDQVTGELTDNRTRYLGTKSVKLFHVRIQSKDAIMAASSRAWLLYDYQSRFHLT 726

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI-PLGEHPRR-ICHQ 407
             ++   +     F+S   P+ +    E  L I +++ +  +    + PL   PRR + H+
Sbjct: 727  PLSYAALEFAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNHVVHPLDYTPRRMVVHK 786

Query: 408  ---------------------EQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIST- 445
                                 E+ +  A   ++    AEE++   V+ + D   ++ ST 
Sbjct: 787  ASGNLIIIENDHAAFTVKGKMERRKQLADELMEVAKEAEEADQQAVKEMADAIRKWASTV 846

Query: 446  -------------YPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLP-EENEPTKGRIL 490
                         +P    E   +I    F + S+  +  VG    L  +  +   G I 
Sbjct: 847  RVMRSNDGETLSHFPFAEDEAAFAIAMVQFQNQSDTQFVLVGCGCELQLKPRKANGGCIY 906

Query: 491  VFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
             F++      LQL+    T   V +++ F G  LA + +K++LY     D G R+L ++C
Sbjct: 907  TFLLAANGTTLQLLHRTATDEVVNAIHDFRGMALAGVGKKVRLY-----DLGKRKLLAKC 961

Query: 549  GHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
             +       + +++ G  IVV D  +S+  + YK ++G +     + +  +++ V +LD 
Sbjct: 962  ENRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDY 1021

Query: 608  DIYLGAENNFNLFTVRKNSEGATDE------------ERG-------RLEVVGEYHLGEF 648
            D  +   + F    V +  +G T+E            +RG       +LE +   ++G+ 
Sbjct: 1022 DT-VAVGDRFGNIAVLRLPKGVTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDA 1080

Query: 649  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIK 707
            +   +  SLV        G    + + T++G+IG++   +  +++ F + L+ ++R    
Sbjct: 1081 ITSMQKTSLV-------PGANDCLCYTTISGIIGILVPFMSRDEFEFFQNLEMHMRVEYP 1133

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             + G +H  +RS+         K+ +DGDL E +  +   +   + + +     E+ K++
Sbjct: 1134 PLCGRDHLAYRSY-----YFPVKSIIDGDLCEQYSLMPLDKQKSVGEELGRKSTEIHKKL 1188

Query: 768  EEL 770
            E++
Sbjct: 1189 EDI 1191


>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio]
 gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3
          Length = 1217

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 203/863 (23%), Positives = 373/863 (43%), Gaps = 130/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQESLSPIMSCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIIRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGEKGTIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                VRL++      +    L+  E   S+  C F +  + +Y 
Sbjct: 846  NLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAICRFLNGGDDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G I  + +  G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G ++L  +C   H   L   + T G  ++V D+ +S+  + Y+  E  
Sbjct: 966  LLRIY-----DLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ 1020

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERG 635
            +   A D    W++   +LD D    A+   N+  VR   N+    DE         +RG
Sbjct: 1021 LIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG 1080

Query: 636  RL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 687
             L       E++  YH+GE V   +  +L+        G   ++++ T++G IG++    
Sbjct: 1081 LLNGASQKAEIIINYHIGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFT 1133

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
             HE + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   
Sbjct: 1134 SHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDPH 1188

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            +   +S+ ++ +  E+ K++E++
Sbjct: 1189 KQKSVSEELDRTPPEVSKKLEDI 1211


>gi|432114152|gb|ELK36185.1| Splicing factor 3B subunit 3 [Myotis davidii]
          Length = 1217

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 212/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 844

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C F++    +Y
Sbjct: 845  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTGEDWY 904

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 905  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|326927039|ref|XP_003209702.1| PREDICTED: splicing factor 3B subunit 3-like [Meleagris gallopavo]
 gi|363738006|ref|XP_001232348.2| PREDICTED: splicing factor 3B subunit 3 [Gallus gallus]
          Length = 1217

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 208/865 (24%), Positives = 377/865 (43%), Gaps = 134/865 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPILCCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYL 282
            +  D +VRI SL   + +  + L  + +P +   LC  E                G  YL
Sbjct: 609  L-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E +            T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                +R+++      +    L+  E   S+  C FS+    +Y 
Sbjct: 846  NLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEEWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G +  + + +G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEE 584
             +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  E
Sbjct: 966  LLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVIVSDVQESFIWVRYKRNE 1018

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------E 633
              +   A D    W++   +LD D   GA+   N+  VR   N+    DE         +
Sbjct: 1019 NQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWD 1078

Query: 634  RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 686
            RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++  
Sbjct: 1079 RGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVP 1131

Query: 687  L-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
               HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  + 
Sbjct: 1132 FTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSME 1186

Query: 746  RTRMDEISKTMNVSVEELCKRVEEL 770
              +   +++ ++ +  E+ K++E++
Sbjct: 1187 PNKQKNVAEELDRTPPEVSKKLEDI 1211


>gi|440636768|gb|ELR06687.1| pre-mRNA-splicing factor rse1 [Geomyces destructans 20631-21]
          Length = 1212

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 207/816 (25%), Positives = 361/816 (44%), Gaps = 93/816 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   ++ P++D  V +L  +   Q+ +  G     + R +++G+ +NE    EL G
Sbjct: 414  LNLVESIDSMNPLMDCKVANLTEEDAPQIYSICGTGARSTFRTLKHGLEVNEIVESELPG 473

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D +D +++++F + T +L++   + +EE    GF S   TL      
Sbjct: 474  VPSAVWTTKLTRGDEYDAYIILAFSNGTLVLSIG--ETVEEVTDTGFLSSATTLAVQQLG 531

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  AT NA QV +A   G +VY E+  
Sbjct: 532  EDGLIQVHPKGIRHIRADRR--VNEWAAPQHRSIVAATTNAQQVAVALSSGEIVYFEMDS 589

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 590  DGSLAEYDEKREMSGTVTCLSLGEVPEGRVRSNFLAVGC-DDSTVRILSLDPDSTLENKS 648

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P S+ + A    S      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 649  VQALTSAPSSLSIMAMTDSSSGGSTLYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGPK 708

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P  L   S +  T V A S RP + YS    K  + + ++   +     F+S   P+ + 
Sbjct: 709  PAKLFRVSVQGQTAVLALSSRPWLGYSDPVTKGFMLTPLDYAGLEWGWNFSSEQCPEGMV 768

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ + + L   SIPL   PRR     +   F +    N   ++ ++   
Sbjct: 769  GIQGQNLRIFSIEKLTENLLQHSIPLSYTPRRFVKHPEHPYFYVIQSDNNILSKSTKQ-- 826

Query: 432  VRLLDDQTFEFISTYPLDTFEYG-----------------------------------CS 456
             +LL+D + +   +  L   E+G                                    S
Sbjct: 827  -KLLEDPSLQNGDSAVLPAEEFGYPRGRGHWASCIQIVDPIREKKVLQQIDLEDNEAAVS 885

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            + + SF S +  V+  VGT   ++      + G I V+   EDGK ++ I + + +    
Sbjct: 886  MATVSFASQEDEVFLVVGTGKDMVASPRSSSGGFIHVYRFHEDGKEIEFIHKTKVEEPPL 945

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            +L  F G+LL  I +++++Y   +R    R+ Q+E       L + +QT+G  I+V D+ 
Sbjct: 946  ALLGFQGRLLVGIGRELRIYDLGMR-QLLRKAQTEIAAS---LIVGLQTQGSRIIVSDVQ 1001

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGA 629
            +SI+ ++YK +E  +   A D  A W +   ++D +   G +   NL+ +R   K SE A
Sbjct: 1002 ESITFVVYKFQENKLIPFADDTIARWTTCTTMVDYETVAGGDKFGNLWLLRCPTKASEEA 1061

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT------------- 676
             +E  G   V    H  +++    H   V  +  +    IPT I  T             
Sbjct: 1062 DEEGSGAHLV----HERQYLQGAPH--RVALMAHNFANDIPTSIQKTNLVAGGRDCLLWS 1115

Query: 677  -VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
             + G I + I  +  E   F + L+ +LR     + G +H  +RS+      V  K  +D
Sbjct: 1116 GLQGTIAIMIPFVSREDVDFFQTLEQHLRTEDAPLAGRDHLIYRSY-----YVPVKGVID 1170

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E +  L   +   I+   + SV E+ +++ ++
Sbjct: 1171 GDLCERYTLLPTDKKMMIAGEFDRSVREIERKISDM 1206


>gi|224064143|ref|XP_002188384.1| PREDICTED: splicing factor 3B subunit 3 [Taeniopygia guttata]
          Length = 1217

 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 210/865 (24%), Positives = 376/865 (43%), Gaps = 134/865 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPILCCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYL 282
            +  D +VRI SL   + +  + L  + +P +   LC  E                G  YL
Sbjct: 609  L-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E +            T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                +R+++      +    L+  E   S+  C FS+  + +Y 
Sbjct: 846  NLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDEWYV 905

Query: 472  -VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  L        G  +    +V  G KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEE 584
             +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  E
Sbjct: 966  LLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVIVSDVQESFIWVRYKRNE 1018

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------E 633
              +   A D    W++   +LD D   GA+   N+  VR   N+    DE         +
Sbjct: 1019 NQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWD 1078

Query: 634  RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 686
            RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++  
Sbjct: 1079 RGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVP 1131

Query: 687  L-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
               HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  + 
Sbjct: 1132 FTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSME 1186

Query: 746  RTRMDEISKTMNVSVEELCKRVEEL 770
              +   +++ ++ +  E+ K++E++
Sbjct: 1187 PNKQKNVAEELDRTPPEVSKKLEDI 1211


>gi|426192113|gb|EKV42051.1| hypothetical protein AGABI2DRAFT_229642 [Agaricus bisporus var.
            bisporus H97]
          Length = 1213

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 200/815 (24%), Positives = 357/815 (43%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++L       Q+    G     SLR +++G+ + E  S +L GI   +W+
Sbjct: 417  SLDPIIDSKVLNLLPNSDTPQIFAACGRGARSSLRTLQHGLEVEESVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             + + DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TKRNEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P    +  AT N  QV++A     LVY E+  DG L E 
Sbjct: 535  HPHGIRHVLADRRV--NEWRVPSNKIIVAATTNKRQVVVALSSAELVYFELDLDGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L I  + E    +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSIGDVPEGRQRTPYLAVGC-EDQTVRIISLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+PI L 
Sbjct: 652  PSAICIADMLDASINKAQPTMFVNIGLQNGVLLRTVLDPINGQLTDTRTRFLGTRPIKLV 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                     + A S R  + Y+    + ++ +  + + +   F++   P+ L       L
Sbjct: 712  RVLIHKHPAILALSSRSWLNYTYQNFMHFTPLIYENLDYAWSFSAELSPEGLIGISGSVL 771

Query: 380  TIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAIC-----------------SLKNQ 421
             I  +  +  KL   SIPL   PR+      +  F +                   L+ Q
Sbjct: 772  RIFHVPRLGIKLKQDSIPLSYTPRKFITYPLNNLFYLIEGDHRVMGQDAVDKKLNELRQQ 831

Query: 422  SCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
            + A + E+                     +R++D    + IS  PLD  E   S+    F
Sbjct: 832  NKAIDQEVLNLSPEVFGRPKAANGTWASNIRIIDPVEGKTISVVPLDGNESAFSLAVVPF 891

Query: 463  SDDSN-VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            S   N ++  VGTA    + P        R+  F+ +  +L+L+ + E      +L AF 
Sbjct: 892  SAKGNELHLVVGTAADTKLSPRTCSTGFLRVYKFLEDGRQLELVHKTEIDDVPLALMAFQ 951

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G+L+A + + +++Y    K MLR    ++  S          + + T+G  I+VGD+ +S
Sbjct: 952  GRLVAGVGKALRIYDIGKKKMLRKVENKQFGSAI--------VTLSTQGSRILVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDE 632
            I   +YK  E  +   A D    W+SA  ++D +  + A+   N+F  R +   +   DE
Sbjct: 1004 IFFAVYKAPENRLLIFADDSQPRWISAATMVDYNTVVAADRFGNIFVNRLDPRVSDQVDE 1063

Query: 633  ---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
                     E+G       + +++  +H+G+ +      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGLYMGAPHKTKMICHFHVGDLITSIHKVSLV-------AGGREVLLYTG 1116

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1117 LHGTIGILVPFVTKEDVDFISTLEQHMRTEQVSLVGRDHLGWRGY-----YVPVKAVVDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E +  L  ++   I+  ++ S+ E+ K++E+L
Sbjct: 1172 DLCEMYAKLPGSKQSAIAGELDRSIGEVLKKLEQL 1206


>gi|327286386|ref|XP_003227911.1| PREDICTED: splicing factor 3B subunit 3-like [Anolis carolinensis]
          Length = 1217

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 211/866 (24%), Positives = 378/866 (43%), Gaps = 136/866 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPILCCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYL 282
            +  D +VRI SL   + +  + L  + +P +   LC  E                G  YL
Sbjct: 609  L-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGAEKQDELGERGSIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E +            T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS---DDSNV 468
                                VR+++      +    L+  E   S+  C F+   DD +V
Sbjct: 846  NLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTGDDWHV 905

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
               V    +L        G +  + +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 906  LVGVAKDLIL-NPRSVAGGFVYTYKLVNNGEKLEFMHKTPVEEVPAAIAPFQGRILIGVG 964

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHE 583
            + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  
Sbjct: 965  KLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQTIGHRVIVSDVQESFIWVRYKRN 1017

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--------- 632
            E  +   A D +  W++   +LD D   GA+   N+  VR   N+    DE         
Sbjct: 1018 ENQLIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALW 1077

Query: 633  ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++ 
Sbjct: 1078 DRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILV 1130

Query: 686  SL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
                HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +
Sbjct: 1131 PFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSM 1185

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   +S+ ++ +  E+ K++E++
Sbjct: 1186 EPNKQKNVSEELDRTPPEVSKKLEDI 1211


>gi|405970223|gb|EKC35151.1| Splicing factor 3B subunit 3 [Crassostrea gigas]
          Length = 1217

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 204/838 (24%), Positives = 371/838 (44%), Gaps = 129/838 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI    + DL  +   Q+ T  G     +LR++R+G+ ++E A  EL G    +W++
Sbjct: 403  SLSPITHCQIADLANEDTPQLYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTV 462

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + DD FD +++VSF++ T +L++   + +EE    GF   T TL C     + LVQ+ 
Sbjct: 463  KKNIDDEFDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSQLGDDALVQIY 520

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-V 209
               +R + S  R   NEWK+P   S+     N  QV++A  GG LVY E+   G L E  
Sbjct: 521  PDGIRHIRSDKR--VNEWKTPGKKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYT 578

Query: 210  KHAQLEYEISCLDIN--PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 267
            +  ++  E+ C+ +   P+GE     +  AVG+ +D +VRI SL   + ++   L  + +
Sbjct: 579  ERKEMSSEVVCMALGRVPVGEQ--RCRFLAVGL-SDNTVRIISLDPSDCLSP--LSMQAL 633

Query: 268  PR-SVLLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
            P  S  LC  E                G  +L   L +G LL  +L+  TG+L+D +   
Sbjct: 634  PEPSESLCIVEMGGTEAKEETGEPGTVGGLFLNIGLQNGVLLRTVLDNVTGDLSDTRTRY 693

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            LG +P+ L   S + +  V A S R  + Y+   +   + ++ + + +   F S   P+ 
Sbjct: 694  LGVRPVKLFRISMQGSEAVLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQCPEG 753

Query: 371  LAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAICSLKN-------- 420
            +       L I  ++ +  +  + S PL   PR+ + H E +    I +  N        
Sbjct: 754  IVAISTNTLRILALEKLGAVFNQVSHPLQHTPRKFVIHPETNNLIVIETEYNAYTEATKM 813

Query: 421  ------------QSCAEESEM-----------------------------HFVRLLDDQT 439
                           AEE EM                               +R+++  +
Sbjct: 814  ERKQQMAEEMVEMVSAEEREMAAEMAANFLNEERSESIFGAPKAGPGMWASIIRIINPIS 873

Query: 440  FEFISTYPLDTFEYGCSILSCSFS---DDSNVYYCVGTAYVLPEENEPTKGRILVFIVED 496
               +    L+  E   SI    F+   DD  V   V    VL      T G + ++ +ED
Sbjct: 874  GNTLEKIQLEQNESVHSIALLKFASRGDDQFVLVGVARDLVL-NPRSLTGGFLYLYQLED 932

Query: 497  G--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-- 552
            G   L+L+ +   +    ++ +F G++L  + + +++Y     D G +++  +C +    
Sbjct: 933  GGESLKLLHKTPVEDVPGAIASFQGRVLIGVGRYLRIY-----DIGKKKMLRKCENKSIP 987

Query: 553  -HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
             ++ A++  T G+ I+  D+  S   + YK +E  +   A D N  W++A   LD +   
Sbjct: 988  NYVSAIH--TVGNRIIASDVQDSFHFVRYKRQENQLIVFADDTNPRWITASCSLDYNTVA 1045

Query: 612  GAENNFNLFTVRKNSEGATDE-----------ERGRL-------EVVGEYHLGEFVNRFR 653
            GA+   N+  +R   + + D            +RG L       +V+  +HLGE V   +
Sbjct: 1046 GADKFGNITIIRLPGDVSDDVDEDPTGNKALWDRGLLNGASQKADVMMNFHLGEMVTSLQ 1105

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
              +L+        G   ++++ T++G IG+ +A   HE + F + L+  +R     + G 
Sbjct: 1106 KATLI-------PGGSESLVYTTLSGGIGMLVAFTSHEDHDFFQHLEMYMRTEHPPLCGR 1158

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1159 DHLSFRSY-----YYPVKNVIDGDLCEMFNSMDPVKQKSVSEELDRTPSEVSKKLEDI 1211


>gi|31213215|ref|XP_315551.1| AGAP005549-PA [Anopheles gambiae str. PEST]
 gi|21299714|gb|EAA11859.1| AGAP005549-PA [Anopheles gambiae str. PEST]
          Length = 1217

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 205/864 (23%), Positives = 363/864 (42%), Gaps = 132/864 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+QL  L +  D   SY           PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRQLKNLVMVDDIP-SY----------APILGCQVADLANEDTPQLYLACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             S+R++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   D 
Sbjct: 433  SSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIG--DT 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIMKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549  VNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGSVPSGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-----------------GISY 281
            +  D +VRI SL   + ++   +  + +P +   LC  E                 G  Y
Sbjct: 609  L-ADNTVRIISLDPTDCLSPRSM--QALPSAAESLCIVEMGTVETSSEDDGVTITTGCIY 665

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S R  + Y 
Sbjct: 666  LNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEAVLAMSSRSWLSYY 725

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + + +   F+S    + +       L I  ++ +  +  + + PL   
Sbjct: 726  YQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQITFPLEYT 785

Query: 401  PRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE----------------FIS 444
            P+R    +++    I    + +  EE++    + + D+  E                FI+
Sbjct: 786  PKRFAIHQETGKLIISETDHNAYTEETKTVRKKQMADEMREAAGEDEQELANEMADAFIN 845

Query: 445  -TYPLDTF---------------------------------EYGCSILSCSFSDDSNVYY 470
               P D F                                 E   S+    F+ D   Y 
Sbjct: 846  EVLPEDVFSSPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVLSLALVRFAVDQKWYV 905

Query: 471  CVGTAYVLPEENEPTKGRIL-VFIVEDGKLQL--IAEKETKGAVYSLNAFNGKLLAAINQ 527
              G A  L    + + G  + V+ V+    QL  +   E   A  +L  F G+LLA I +
Sbjct: 906  VAGVAKDLQINPKISGGGFIDVYKVDSQTHQLEHMHRTEIDDAPGALCPFQGRLLAGIGK 965

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEG 585
             +++Y     D G ++L  +C  + HI    + +Q  G  + V D+ +S+  + YK  E 
Sbjct: 966  VLRIY-----DLGKKKLLRKC-ENKHIPNQIVNIQGMGQRVYVSDVQESVYCIKYKRAEN 1019

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD-----------EER 634
             +   A D +  W+++  +LD D     +   N+  +R     + D            +R
Sbjct: 1020 QLIIFADDTHPRWITSASLLDYDTVATGDKFGNIAILRLPHSVSDDVDEDPTGNKALWDR 1079

Query: 635  GRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
            G L       E +  +HLGE V   +  +L+        G   ++I+ T++G +G +   
Sbjct: 1080 GLLNGASQKAENICTFHLGEIVMSLQKATLI-------PGGSESLIYATMSGTVGALVPF 1132

Query: 688  -PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
               E Y F + L+ ++R     + G +H  +RS+         KN +DGDL E F  L  
Sbjct: 1133 TSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSY-----YYPVKNVMDGDLCEQFTSLDP 1187

Query: 747  TRMDEISKTMNVSVEELCKRVEEL 770
             +   I+  +  +  E+ K++E++
Sbjct: 1188 AKQKSIASDLGRTPSEVAKKLEDI 1211


>gi|425768510|gb|EKV07031.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum PHI26]
 gi|425775700|gb|EKV13954.1| Pre-mRNA-splicing factor rse1 [Penicillium digitatum Pd1]
          Length = 1209

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 211/817 (25%), Positives = 359/817 (43%), Gaps = 95/817 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  +++L      Q+ T  G+    S R +++G+ ++E    +LQ 
Sbjct: 411  VNLMESMNSLSPLIDSKILNLSEDDAPQIYTICGSGARSSFRTLKHGLEVSEIVESDLQQ 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D F T++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRADEFHTYIILSFANGTLVLSIG--EIVEEVSDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + LVQV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLVQVHPRGIRHILADQRV--NEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGTLAEYDERRQMSGTVTSLSMGEVPEGRMRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    S      YL   L  G  L  +L+  TGEL+D +   +G +
Sbjct: 646  VQALTSAPSALQIMAMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLSQVSVKGQTAVLALSTRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMI 765

Query: 373  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I T++ +    ++ SIPL   PRR         F +    N   +  +    
Sbjct: 766  GIQGRSLRIFTVEKLDNNMLQESIPLSYTPRRFVKHPDQHLFYVIESDNNVLSPATRQ-- 823

Query: 432  VRLLDDQ-----------------------------------TFEFISTYPLDTFEYGCS 456
             RL+DD                                    T   IST  L+  E   S
Sbjct: 824  -RLIDDSQAQNGEVADLPPADFGYPRATGHWASCVQIVDPITTKSVISTLDLEDNEAAVS 882

Query: 457  ILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGA 510
            + + SFS  D   +  VGTA    V P  +  + G I ++   EDG+ L+ I + +    
Sbjct: 883  LAAVSFSSQDDETFLVVGTAKDMTVSPPSS--SCGFIHIYRFQEDGRELEFIHKTQVDEP 940

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIV 567
              +L  F G+LLA I   +++Y     D G ++L  +C     ++   +   QT+G  I+
Sbjct: 941  PLALLGFQGRLLAGIGPVLRVY-----DLGMKQLLRKC--QAPVVPKTIVGLQTQGSRII 993

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---K 624
            V D+ +S++ ++YK+++  +   A D  A W S+  ++D +   G +   NL+ VR   K
Sbjct: 994  VSDIRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSK 1053

Query: 625  NSEGATDE--------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIF 674
             SE A ++        E+G L   G  H  E +  F    +   L  + +  G    V++
Sbjct: 1054 ISEQADEDGSGAHLIHEKGYLH--GTPHRLELMVHFFAQDIPTSLHKTQLVAGGRDIVVW 1111

Query: 675  GTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
              + G IG+ +  +  E   F + L+T L      + G +H  +R +    K V     +
Sbjct: 1112 TGLQGTIGMFVPFVSREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGV-----I 1166

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E +L L       I+  ++ SV E+ +++ ++
Sbjct: 1167 DGDLCEMYLLLPNDTKLMIAGELDRSVREIERKISDM 1203


>gi|321478392|gb|EFX89349.1| hypothetical protein DAPPUDRAFT_303178 [Daphnia pulex]
          Length = 1215

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 205/861 (23%), Positives = 367/861 (42%), Gaps = 128/861 (14%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L        V+ +E   +L P++   + DL  +   Q+    G    
Sbjct: 384  TFFFAPRPLKNLVL--------VDEME---SLSPVLACHIADLANEDTPQLYALCGRSSR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   DD FD ++VVSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRKRADDEFDAYIVVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     N L+QV    +R + +  R   NEWKSP   +++   
Sbjct: 491  VEEVTDSGFLGTTPTLGCSSLGDNALLQVYPEGIRHIRADRR--INEWKSPGKRAISRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV+++  GG LVY E+   G L E  +  ++  E+ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVISLAGGELVYFEMDPTGQLNEYTERKEMTAEVVCMALANVPSGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE--------------GISYLLC 284
            +  D +VR+ SL   + +T   L  + +P +   LC  E              G  +L  
Sbjct: 609  L-ADNTVRVISLDPNDCLTP--LSMQALPATPESLCIVEMGGHDKDSETTGTSGQLFLNI 665

Query: 285  ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 344
             L +G LL  +L+  TG+L D +   LG++P+ L    ++N   V A S R  + Y    
Sbjct: 666  GLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRVMTQNHEAVLAISSRTWLSYYFQN 725

Query: 345  KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR 403
            +   + ++   +     F S   P+ +       L I  ++ +  +  + S PL   PR+
Sbjct: 726  RFHLAPLSYDSLEFASGFASEQCPEGVVAIASNTLRILALEKLGAVFNQVSYPLEYTPRK 785

Query: 404  ICHQEQSRTFAICS--------------------LKNQSCAEESEM-------------- 429
                +  R   I +                    +++ +  EE E+              
Sbjct: 786  FVVHDSGRMIIIETDHNAYTLETKLERRQQIAQEMRDAATEEEQELAHQMADAFLNEDLP 845

Query: 430  ---------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF--SDDSNVYYCV 472
                             VR++D  +   + T  L   E   SI    F   D  + +  V
Sbjct: 846  ESDFGAPKAGAGMWASIVRIMDPTSGNSLHTIRLPQNEAALSIGLARFMNQDPEDYFVLV 905

Query: 473  GTAYVLPEENEPTKGRILV---FIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            G A  L    +   G  +     I E   L+ + +   +   Y++ A+ G++L  + + +
Sbjct: 906  GVAKDLKLNPKQCDGGFIYTYKLINEWSALEFVHKTPVEDTPYAICAYQGRVLIGVGRLL 965

Query: 530  QLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
            +LY     D G ++L  +C   H     + +Q  G  + V D+ +SI  + YK  E  + 
Sbjct: 966  RLY-----DMGKKKLLRKCENKHLPSCVVNIQALGQRVYVADVQESIHFVRYKRMENQLI 1020

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE-----------ERGRL 637
              A D +  +++ + +LD D    A+   N+  +R  S  + D            +RG L
Sbjct: 1021 IFADDTHPRYVTTMCLLDYDTVAVADKFGNISVLRLPSRTSDDVDEDPTGNKSFWDRGVL 1080

Query: 638  -------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PH 689
                   EV+   H+GE     +  +L+        G   ++++ T++G IGV+      
Sbjct: 1081 NGASNKAEVLCNIHIGETALSLQRATLI-------PGGSESLVYTTLSGSIGVLVPFTSR 1133

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            E + F + L+ +LR     + G +H  +RSF         KN +DGDL E F  +  ++ 
Sbjct: 1134 EDHDFFQALEMHLRSEHPPLCGRDHLAFRSF-----YFPVKNVIDGDLCEQFNSIDSSKQ 1188

Query: 750  DEISKTMNVSVEELCKRVEEL 770
              ++  ++ +  E+ K++E++
Sbjct: 1189 KAVADDLDRAPNEVSKKLEDI 1209


>gi|322693432|gb|EFY85292.1| Pre-mRNA-splicing factor RSE1 [Metarhizium acridum CQMa 102]
          Length = 1221

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 207/810 (25%), Positives = 363/810 (44%), Gaps = 91/810 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  V +L  +   Q+ T  G     + R++R+G+ +NE  + EL GI 
Sbjct: 416  LVESIPSMNPLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRGEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFSTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R V +      NEW +P   S+  A+ NA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHVRNGKV---NEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E  + S   AVG   D +VRI SL P+  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRARSSFLAVGC-DDCTVRILSLDPESTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + + TT V   S RP + YS    K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGTTCVLGLSSRPWLGYSDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS--------LKNQSCA 424
            +   L I +ID +   L  ++I L   P++ I H EQ   + I S        L+ Q  A
Sbjct: 770  QGQSLRIFSIDRLGDTLTQKAISLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLIA 829

Query: 425  EESEMHF-VRLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
            + + ++   ++L  + F +                       + T  L+  E   S    
Sbjct: 830  DPAVVNGDTKVLPPEEFGYPKGNRRWASCINVIDPVSEEPQVVQTVDLENNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
             F S D+  +  VGT     V P         +  F  E  +L+ I + + +    +L  
Sbjct: 890  PFASQDNESFLIVGTGKDIVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIP 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F GKLLA + + +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++
Sbjct: 950  FQGKLLAGVGKTLRVYDLGMR-QMLRKAQAEVAPQ-QIVSL--NTQGSRIIVGDVQQGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             + YK     +   A D  A W++   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 YVTYKPTTNKLIPFADDIIARWITCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL+++  ++  +        SLV       VG    +++  + 
Sbjct: 1066 SGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKTSLV-------VGGQDVLLWSGLM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+++LR     + G +H  +RS+         K  +DGDL
Sbjct: 1119 GTIGVFIPLISREDADFFQSLESHLRTEDPPLAGRDHLMYRSY-----YAPVKGIIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             E +  L   +   I+  ++ SV E+ +++
Sbjct: 1174 CERYTLLPNDKKQMIAGELDRSVREIERKI 1203


>gi|301604148|ref|XP_002931705.1| PREDICTED: splicing factor 3B subunit 3 [Xenopus (Silurana)
            tropicalis]
          Length = 1217

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 203/863 (23%), Positives = 376/863 (43%), Gaps = 130/863 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQDSLSPIMSCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   +D +D +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P    +    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKIIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYL 282
            +  D +VRI SL   + +  + L  + +P +   LC  E                G  YL
Sbjct: 609  L-VDNTVRIISLDPSDCL--QPLSMQALPAQPEALCIVEMGGAERQDELGERGSIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E +            T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                +R+++      +    L+  E   S+  C F++  + +Y 
Sbjct: 846  NLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFTNTGDDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++        G +  + +V +G KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVAKDLILNPRSVAAGLVYTYKLVNNGEKLEFVHKTPVEEVPAAIAPFQGRVLIGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G ++L  +C   H     + +QT G  +++ D+ +S   + YK  E  
Sbjct: 966  LLRIY-----DLGKKKLLRKCENKHISNFIVGIQTIGQRVILSDVQESFIWVRYKRNENQ 1020

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERG 635
            +   A D    W++   +LD D   GA+   N+  VR   N+    DE         +RG
Sbjct: 1021 LIIFADDTYPRWVTTSCLLDYDTVAGADKFGNICIVRLPSNTNDDVDEDPTGNKALWDRG 1080

Query: 636  RL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL- 687
             L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG++    
Sbjct: 1081 LLNGASQKAEVIVNYHVGETVLSVQKTTLI-------PGGSESLVYTTLSGGIGILVPFT 1133

Query: 688  PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
             HE + F + ++ +LR     + G +H  +RS+         KN +DGDL E F  +   
Sbjct: 1134 SHEDHDFFQHVEMHLRSEHPPICGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPV 1188

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            +   +++ ++ +  E+ K++E++
Sbjct: 1189 KQKSVAEELDRTPPEVSKKLEDI 1211


>gi|393217872|gb|EJD03361.1| hypothetical protein FOMMEDRAFT_108572 [Fomitiporia mediterranea
            MF3/22]
          Length = 1213

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 197/815 (24%), Positives = 347/815 (42%), Gaps = 102/815 (12%)

Query: 33   NLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
            +L PI+D  V++ L      Q+    G     S R +R+G+ + E  S +L GI   +W+
Sbjct: 417  SLDPIIDSKVMNILPNSDTPQIFAACGRGARSSFRTLRHGLEVEEVVSSDLPGIPNAVWT 476

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             R   DDP+D+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 477  TRIKEDDPYDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGSDALLQV 534

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV 209
                +R V +  R   NEW+ P G ++  AT N  QV++A     LVY E+  +G L E 
Sbjct: 535  HPQGIRHVLADRRV--NEWRVPQGRTIVAATTNKRQVVVALSSAELVYFELDLEGQLNEY 592

Query: 210  KHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            +  + +   +  L +  +      +   AVG   D +VRI SL   + +    L     P
Sbjct: 593  QDRKAMGSTVLALSVGEVPPGRQRTPYLAVGC-EDQTVRIVSLDPESTLETISLQALTAP 651

Query: 269  RSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
             S +  A          +   ++   L +G LL  +L+   G+LTD +   LGT+P+ L 
Sbjct: 652  PSAICIADMLDSSIDKNQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGTRPVKLM 711

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
                +  + + A S R  + Y+    L ++ +  + + H   F++   P+ L       L
Sbjct: 712  RVQVQRNSSILALSSRSWLNYTHQGLLHFTPLIFETLDHAWEFSAELCPEGLIGISGSVL 771

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-----------------AICSLKNQ 421
             I  I  +  KL   S+PL   PR+      ++ F                  +  L+ +
Sbjct: 772  RIFQIPRLGTKLKQDSMPLTYTPRKFIPHPMNQYFYMIEADHRVMGDDAAKEKLAELRQR 831

Query: 422  SCAEESEM-------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF 462
                + E+                     +R+LD      +    LD  E   SI    F
Sbjct: 832  GVKYDQEVVDLPPEVFGRPKAPAGTWGSCIRILDPINKATVKVVHLDNNEAAFSIAIVPF 891

Query: 463  -SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
             + +S ++ CVGTA   ++ P        R   F      L+L+ + E      +L AF 
Sbjct: 892  AARNSELFLCVGTASSTFLAPRSCSSGFIRTYAFTNGGADLELVHKTEADDVPMALMAFQ 951

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G+L A + + +++Y    K +LR   T+   S          + + T+G  I+VGD+ +S
Sbjct: 952  GRLCAGVGKSLRIYEIGKKKLLRKVETKTYGSAI--------VTLNTQGSRIIVGDMQES 1003

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--GATDE 632
            I   ++K  E  +   A D    W ++  ++D       +   N+F  R +S+     DE
Sbjct: 1004 IVYAVFKPPENRLLIFADDSQPRWTTSAVMVDYTTIAAGDKFGNVFINRLDSKISDQVDE 1063

Query: 633  ---------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
                     E+G L        ++  +H+G+ V      SLV        G    +++  
Sbjct: 1064 DPTGAGILHEKGLLMGAPHKTGMIAHFHVGDIVTSIHKISLV-------AGGREVLLYTC 1116

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IG++   +  E   F+  L+ ++R     + G +H  WR +      V  K  +DG
Sbjct: 1117 LHGTIGILVPFVSKEDVDFISTLEQHMRSEKLSLVGRDHLAWRGY-----YVPVKAVVDG 1171

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E F  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1172 DLCEQFARLPANKQSAIAVELDRTVGEVLKKLEQL 1206


>gi|353235645|emb|CCA67655.1| hypothetical protein PIIN_01483 [Piriformospora indica DSM 11827]
          Length = 1145

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 203/774 (26%), Positives = 346/774 (44%), Gaps = 75/774 (9%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ- 83
            +EV++ + N  PI D  + DL+  G   VVTCSG  + GSLR +R+G  I E AS+E   
Sbjct: 356  LEVIDTFSNTAPIADAVLADLDNTGDHVVVTCSGNGRTGSLRTIRSGANIEELASMETSI 415

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRIL----AMNLEDELEETEIEGFCSQTQTLFC 139
             IK ++ L+  T      ++++S+  ET+++    A  L  EL   +  G   +  TL  
Sbjct: 416  PIKNIFPLQE-TSGTSHLYMLISYDQETKLVDAREAPRLS-ELSAHQFPGVAREFPTLAA 473

Query: 140  HD---AIYNQ---LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGG 193
             +    I++     VQVT+ +  L    S      W      S+  A+ +   V L   G
Sbjct: 474  GNVRRTIFDTTTLAVQVTTRAAILFDVQSGAEYCRWSG----SITTASVSGDAVCLGLRG 529

Query: 194  GHLVYLEIGDGILTEVKHAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            G ++ L++       V  A+  +  EIS L I PI      S +  +G W D  V+I  L
Sbjct: 530  GKVIALKVDIEAAKLVTQAERNFDKEISTLSIEPIQSGEVTSNVVVIGFWEDFLVKICQL 589

Query: 252  PDLNLITKEHLGGEIIPRSVLLCAF----EGISYLLCALGDGHLLNFLLNMKTGEL--TD 305
             +L  +  E +     P SVL   F    EG+ YLL   G+GH+L+  L      +  T 
Sbjct: 590  HNLAQV-GEDIETPHTPHSVLAWNFGDRKEGL-YLLVGTGNGHILSVKLKETKNRVLATS 647

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            R+ V LG +P+ L   S      + A   R  ++  SN ++   +VN+K +  + PF S+
Sbjct: 648  RRTVVLGDRPVLLHRCSIAGAEVIMATGSRAMLLSWSNGRIAQHHVNIKNIESVAPFTSS 707

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC- 423
            AF D+L       L+I  I  ++KL I S+ LG + P  + +    + FA+  L+ +   
Sbjct: 708  AFGDALIFKLTKGLSIARIGKLEKLKIDSVSLGYDVPNTLAYHPDIKAFAVGCLRTEPSL 767

Query: 424  --AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSIL--SCSFSDDSNVYYCVGTAYVLP 479
              A ++     +L+D  TFEF++++     E    ++       D    Y  VGTA    
Sbjct: 768  NGASDNIGSSFKLIDALTFEFLNSHSFPPNEEVTKVIVGDLVMGDKQERYIIVGTAIWED 827

Query: 480  EE-NEPTKGRILVFIVEDGK---------------LQLIAEKETKGAVYSLNAFNGKLLA 523
            EE +EPTKGRIL+F     K               L L+ E++  G+   L   + +L  
Sbjct: 828  EEGSEPTKGRILLFRASLSKGMQVGSGAANAPPPVLTLVLEQDIPGSAVGLAVVDHRLAI 887

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDLMKSISLLIY 580
             +N  + +Y+ + R    + L+ +      H + +   V      +V+GD ++S + L +
Sbjct: 888  IVNTIVVVYE-LRRTQTAQGLELKAVDQWIHNYAIWSIVPAGDSRVVIGDALQSATTLRW 946

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDDIY-LGAENNFNLFTVRKNSEGATDEERGRLEV 639
               +  +E  A+D+    ++++ +  D+ Y + ++ + NL + +         E   L+ 
Sbjct: 947  NGTK--LEVVAKDWTT--VNSLNVTADETYVIQSDIDGNLMSYKP--------EPPILQQ 994

Query: 640  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKL 698
             G YH GE ++    GS+  R   +        +  T  G I +I   L  E+ + L  +
Sbjct: 995  TGHYHFGETISCLVPGSIRSRSNQNGSIVAAKHVLLTPGGRISLIQEILDEEKEMTLLAI 1054

Query: 699  QTNLRKVIKG------VGGLN--HEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
            + N+   +K       VG     H   R     ++ + +  FLDGD++   L+L
Sbjct: 1055 ERNMSAALKAERDHYDVGSWRAPHVNTRRVITSEEPLQSYGFLDGDILSHALEL 1108


>gi|296417673|ref|XP_002838477.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634416|emb|CAZ82668.1| unnamed protein product [Tuber melanosporum]
          Length = 1202

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 196/816 (24%), Positives = 359/816 (43%), Gaps = 93/816 (11%)

Query: 23   SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL 82
            S VE ++   ++ P+VD  + +L      Q+ T  G+    + R +++G+   E  S EL
Sbjct: 406  SLVEAID---SMNPLVDCKIANLTDDDAPQIYTVCGSGPRSTFRTLKHGLETTEIVSSEL 462

Query: 83   QGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 141
             G+   +W+ + +  D FD ++V+SF + T +L++   + +EE    GF S   TL    
Sbjct: 463  PGVPSAVWTTKLTNGDEFDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQ 520

Query: 142  AIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
               + L+QV    +R + +  R   NEW +P   S+  A+ N+ QV +A   G +VY E+
Sbjct: 521  LGEDALLQVHPKGIRHIRADRRV--NEWPAPQHRSIVAASTNSRQVAVALSSGEIVYFEM 578

Query: 202  -GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 258
              DG L E +   ++   ++CL +  + E    S   AVG   D +VRI SL PD  L +
Sbjct: 579  DSDGQLAEYEEKKEMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPDSTLES 637

Query: 259  KEHLGGEIIPRSVLLCAFEGIS---------YLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            K        P S+ + +    +         YL   L  G  L  +L+  TGELTD +  
Sbjct: 638  KSVQALTSAPSSLCIMSMPDSASETSRSLTLYLHIGLYSGVYLRTVLDTVTGELTDTRTR 697

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK-KLLYSNVNLKEVSHMCPFNSAAFP 368
             LG +P+ +    ++    V A S RP + YS  + + + + +    +     F+S   P
Sbjct: 698  FLGPKPVKIFKVIAQGLPSVLALSSRPWLGYSDARGQFMLTPLTYPMLEWGWTFSSEQCP 757

Query: 369  DSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC----------- 416
            + +   +   L I TI+ +   L   SIPL   PR++        F +            
Sbjct: 758  EGMVGIQGQNLRIFTIEKLTDNLQQESIPLSYTPRKMLKHPDQPVFYVAEADANTLSVAT 817

Query: 417  ------SLKNQSCAEESEMHF------------VRLLDDQTFEFISTYPLDTFEYGCSIL 458
                  S +N    E +   F            + ++D  + E      L+  E   SI 
Sbjct: 818  KQKLMNSAQNGDTNELAPAEFGNPRGEGHWASCISVVDPISKEVTQRIELEENEAAFSIA 877

Query: 459  SCSFSD-DSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 514
            + SFS  D   +  VGT     + P ++      I  F+ +  +L+ I + +      +L
Sbjct: 878  AVSFSSQDDEWFLVVGTGKDTCLSPRKSANGYIHIYRFLNDGKELEFIHKTKVDEPPLAL 937

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMK 573
              F G+LLA I + +++Y     D G ++L  +  G     +   +QT+G  I+V D+ +
Sbjct: 938  LGFQGRLLAGIGKDLKIY-----DLGMKQLLRKAQGQVAPNVINGLQTQGSRIIVSDVQE 992

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGAT 630
            S++ ++YK+++  +   A D    + +   ++D +   G +   N + VR   K S+ + 
Sbjct: 993  SVTYVVYKYQDNRLIPFADDMIPRFTTCTTMVDYETVAGGDRFGNFWIVRCPQKASDESD 1052

Query: 631  DEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
            ++  G               RL ++  ++  +     +   LV        G   T+++ 
Sbjct: 1053 EDPAGGHLIHERSYLQGAPNRLNLMCHFYPQDIPTSVQKAQLV-------TGGRDTLVWT 1105

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
             + G IG++   +  E   F + L+ ++R     + G +H  +RS+      V  K  +D
Sbjct: 1106 GLQGTIGLMVPFVSREDVDFFQTLEQHMRTEDAPIAGRDHLIYRSY-----YVPVKGVID 1160

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E++  LSR +   I+  ++ SV E+ +++ ++
Sbjct: 1161 GDLCENYSLLSRDKKAMIAAELDRSVREVERKIADM 1196


>gi|406868052|gb|EKD21089.1| pre-mRNA-splicing factor rse1 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1236

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 210/828 (25%), Positives = 364/828 (43%), Gaps = 92/828 (11%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            P   +  + +P    S VE ++   ++ P++D  V +L  +   Q+ +  G     + R 
Sbjct: 400  PYTPVYFHPRPAENLSLVESID---SMNPLMDCKVANLTEEDAPQIYSICGTGARSTFRT 456

Query: 68   VRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            +R+G+ ++E    EL G+   +W+ + + +D +D ++++SF + T +L++   + +EE  
Sbjct: 457  LRHGLEVSEIVESELPGVPSAVWTTKLTRNDTYDAYIILSFTNGTLVLSIG--ETVEEVT 514

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  NA Q
Sbjct: 515  DTGFLSSAPTLAVQQLGDDGLIQVHPKGIRHIRADRRV--NEWAAPQHRSIVAAATNARQ 572

Query: 187  VLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDI 244
            V +A   G +VY E+  DG L E  +  ++   ++CL +  + E    SQ  AVG   D 
Sbjct: 573  VAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLSLGEVPEGRVRSQFLAVGC-DDS 631

Query: 245  SVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLN 297
            +VRI SL PD  L  K        P ++ + A    S      YL   L  G  L  +L+
Sbjct: 632  TVRILSLDPDSTLENKSVQALTSAPSALSIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLD 691

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKE 355
              TGEL+D +   LG +P  L   S +    V A S RP + YS    K  + + +N   
Sbjct: 692  EVTGELSDTRTRFLGPKPARLFRVSVQGQAAVLALSSRPWLGYSDPVTKGFMLTPLNYPG 751

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFA 414
            +     F+S    + +   +   L I +I+ +   L   +I L   PRR     +   F 
Sbjct: 752  LEWGWNFSSEQCTEGMVGIQGQNLRIFSIEKLTDNLLQDTISLTYTPRRFLRHPEHPLFY 811

Query: 415  ICSLKNQSCAEESEMHFVRLLDDQTF-----------EFISTYP---------------- 447
                 N   +  ++    +LL+D +            EF   YP                
Sbjct: 812  TIESDNNILSPATK---AKLLEDPSIVNGDAAVLPAEEF--GYPRGKNHWASCISVVDPV 866

Query: 448  ----------LDTFEYGCSILSCSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVFIVE 495
                      LD  E   S+ + SFS  D  V+  +GT   ++      T G I V+   
Sbjct: 867  TEKRVLQKIDLDDNEAAVSMAAVSFSSQDDEVFLVIGTGKDMIVSPRSSTAGFIHVYRFH 926

Query: 496  D-GK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
            D GK ++ I + + +    +L  F G+LL  I + +++Y   +R    R+ Q+E   +  
Sbjct: 927  DNGKEIEFIHKTKVEEPPMALLGFQGRLLVGIGKDLRIYDLGMR-QLLRKAQAEVAPN-- 983

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
             L + +QT+G  IVV D+ +SI +++YK +E  +     D  + W S   ++D +   G 
Sbjct: 984  -LIVGLQTQGSRIVVSDVQESIIMIVYKFQENKLIPFVDDTISRWTSCTTMVDYETVAGG 1042

Query: 614  ENNFNLFTVR---KNSEGATDE--------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 662
            +   NL+ +R   K SE A +E        ER  L+  G  H    +  F    + M + 
Sbjct: 1043 DKFGNLWLLRCPTKASEEADEEGSASHLVHERSYLQ--GSPHRLTLMAHFFTQDIPMSIQ 1100

Query: 663  DSDV--GQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 719
             +++  G    +++  + G +G+ I  +  E   F + L+ +LR     + G +H  +RS
Sbjct: 1101 KTNLVAGGRDCILWSGIQGTLGILIPFVSREDVDFFQTLEQHLRSEDAPLAGRDHLIYRS 1160

Query: 720  FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            +      V  K  +DGDL E +  L   +   I+  ++ SV E+ +++
Sbjct: 1161 Y-----YVPVKGVIDGDLCERYTLLPTDKKQMIAGELDRSVREIERKI 1203


>gi|449282569|gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
          Length = 1225

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 210/872 (24%), Positives = 376/872 (43%), Gaps = 140/872 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPILCCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPVGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYL 282
            +  D +VRI SL   + +  + L  + +P +   LC  E                G  YL
Sbjct: 609  L-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E +            T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                +R+++      +    L+  E   S+  C FS+  + +Y 
Sbjct: 846  NLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDEWYV 905

Query: 472  -VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  L        G  +    +V  G KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGK 965

Query: 528  KIQLYKWMLRDDGTRELQSECGH-------HGHILALY---VQTRGDFIVVGDLMKSISL 577
             +++Y     D G ++L  +C +         HI A Y   +QT G  ++V D+ +S   
Sbjct: 966  LLRVY-----DLGKKKLLRKCENKILSFLSQKHI-ANYICGIQTIGHRVIVSDVQESFIW 1019

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--- 632
            + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE   
Sbjct: 1020 VRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 1079

Query: 633  ------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                  +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G
Sbjct: 1080 GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSG 1132

Query: 680  VIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++     HE + F + ++ +LR     + G +H  +RS+         KN +DGDL 
Sbjct: 1133 GIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLC 1187

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 1188 EQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 1219


>gi|392570042|gb|EIW63215.1| hypothetical protein TRAVEDRAFT_161375 [Trametes versicolor FP-101664
            SS1]
          Length = 1213

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 209/833 (25%), Positives = 361/833 (43%), Gaps = 93/833 (11%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-ERQGQGQVVTCSGAYKDG 63
            Y  P+ L  L L        V+ LE   +L PI+D  V++L       Q+ T  G     
Sbjct: 400  YFRPRALDNLTL--------VDELE---SLCPIIDSKVMNLLPNSDTPQIFTACGRGARS 448

Query: 64   SLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            + R +R+G+ + E  S +L GI   +W+ +   DD +D+++++SF++ T +L++   + +
Sbjct: 449  TFRTLRHGLEVEEVVSSDLPGIPNAVWTTKLKEDDLYDSYIILSFVNGTLVLSIG--ETI 506

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            EE +  GF S   TL       + L+QV    +R V +  R   NEWK P G ++  AT 
Sbjct: 507  EEVQDTGFLSSAPTLAVQQIGADALLQVYPHGIRHVLADRRV--NEWKVPSGKTIVCATT 564

Query: 183  NASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGM 240
            N  QV++A     LVY E+  DG L E +  + +   +  L +  + E    +   AVG 
Sbjct: 565  NKRQVVVALSSAELVYFELDLDGQLNEYQDRKAMGSTVLALSVAEVPEGRQRTPYLAVGC 624

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCA---------FEGISYLLCALGDGHL 291
              D +VRI SL   + +    L     P S +  A          +  +++   L +G L
Sbjct: 625  -EDQTVRIVSLDPESTLETISLQALTAPPSAICIADMLDASINKSQPTTFVNIGLQNGVL 683

Query: 292  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
            L  +L+   G+LTD +   LGT+PI L   + +    + A S RP + Y+    + ++ +
Sbjct: 684  LRTVLDPVNGQLTDTRTRFLGTRPIRLLRVNIQQNPAILALSSRPWLNYTYQNFMHFTPL 743

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC----- 405
              + + +   F++    + L       L I  I  +  KL   S+PL   PR+       
Sbjct: 744  IFENLDYAWSFSAELCTEGLIGISGSLLRIFQIPKLGTKLKQDSLPLSYTPRKFMPHPTN 803

Query: 406  ---------HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF---------------- 440
                     H+  S   A   L+      E     V LL  + F                
Sbjct: 804  GLLYLIEGDHRVMSEEAASKKLQEMRARGERIDEEVLLLPPEQFGRPKAPAGTWASCIRI 863

Query: 441  ------EFISTYPLDTFEYGCSILSCSFSDDSN-VYYCVGTA---YVLPEENEPTKGRIL 490
                    +    LD  E   S+    F+   N ++  VGTA   ++ P        R  
Sbjct: 864  INPLESSTVKVIHLDNNEAAFSMAIVPFAARGNELHLVVGTAQDTFLSPRSCTSGFLRTY 923

Query: 491  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
             FI +   L+ + + ET     ++ AF GKL+A + + ++LY     D G ++L  +  +
Sbjct: 924  RFIDDGRDLEFLHKTETSDVPLAVMAFQGKLIAGVGKSLRLY-----DVGKKKLLRKVEN 978

Query: 551  HGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
             G   A+  + T+G  I+VGD+ +S+   +YK  E  +   A D    W++A  +LD + 
Sbjct: 979  KGFPAAIVTLNTQGSRIIVGDMQESVFYAVYKAPENRLLVFADDAQPRWVTATTMLDYNT 1038

Query: 610  YLGAENNFNLFTVR---KNSEGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMR 660
             +  +   N+F  R   K S+   D+  G      +  + G  H    ++ F  G +V  
Sbjct: 1039 VVAGDRFGNVFVNRLDSKISDQIDDDPTGAGILHEKGVLFGAPHKSVMLSHFHVGDIVTS 1098

Query: 661  LPDSDV--GQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
            L    +  G    +++  ++G IG++   +  E    L  L+ ++R     + G +H  W
Sbjct: 1099 LHKVALVAGGREVLLYTCLHGTIGILVPFVSKEDVDLLTTLEQHMRTEQLSLVGRDHLTW 1158

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            R +      V  K+ +DGDL ESF  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1159 RGY-----YVPVKSVVDGDLCESFAKLPANKQSTIAGELDRTVGEVLKKLEQL 1206


>gi|302916981|ref|XP_003052301.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733240|gb|EEU46588.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1212

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 204/813 (25%), Positives = 358/813 (44%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E    + P++D  V +L  +   Q+ T  G     + R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGARSTFRMLKHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R V +      NEW +P   S+  A+ANA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHVRNGHI---NEWAAPQHRSIVAASANAHQVAIALSSGEIVYFEMDADG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPDSTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y     K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGKTCVLGLSSRPWLGYPDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  ID +    I +SIPL   P+++    +   F      N +   E     + 
Sbjct: 770  QGQSLRIFNIDRLGDTLIQKSIPLTYTPKKLVKHPEQPLFYTIEADNNTLPPELRAQLLA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     ++L  + F +                       + T   +  E   S    
Sbjct: 830  DPNVVNGDSQVLPPEDFGYPRANRRWASCINVVDPLSEEGQVLQTVHFENNEAAVSATVV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 516
            SF S D+  +  VGT   ++      ++G + ++  VEDG+ L+ I + + +    +L  
Sbjct: 890  SFASQDNENFLVVGTGKDMIVNPQSYSEGYLYIYRFVEDGRELEFIHKTKIEEPPLALLP 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F GK+  A+  ++++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + ++
Sbjct: 950  FQGKVAVAVGTQLRIYDLGMR-QMLRKAQAEVSAQ-RIVSL--NTQGSRIVVGDVQQGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
            L++YK     +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 LVVYKSATNKLIPFADDTVARWTTCTTMVDYESIAGGDKFGNMFIVRCPEKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL ++  ++  +        SLV       VG    +++  + 
Sbjct: 1066 SGLHLINARDYLHGTPHRLGLMCHFYTQDVPTSITKTSLV-------VGGQEILLWSGIM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ +LR     + G +H  +R +    K V     +DGDL
Sbjct: 1119 GTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGV-----IDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYNLLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|255946770|ref|XP_002564152.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591169|emb|CAP97395.1| Pc22g01070 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1209

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 211/817 (25%), Positives = 359/817 (43%), Gaps = 95/817 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  +++L      Q+ T  G+    + R +++G+ ++E    +LQ 
Sbjct: 411  VNLMESMNSLSPLIDSKILNLSEDDAPQIYTICGSGARSTFRTLKHGLEVSEIVESDLQQ 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D F T++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRGDEFHTYIILSFANGTLVLSIG--EIVEEVSDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + LVQV    +R + +  R   NEW +P   S+  A AN  QV +A   G +VY E+  
Sbjct: 529  EDSLVQVHPRGIRHILADQRV--NEWPAPQHRSIVAAAANERQVAVALSSGEIVYFEMDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGTLAEYDERRQMSGTVTSLSMGEVPEGRMRSSFLAVGC-DDSTVRILSLNPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    S      YL   L  G  L  +L+  TGEL+D +   +G +
Sbjct: 646  VQALTSAPSALQIMAMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFIGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLSQVSVKGQTAVLALSTRPWLGYSDVQTKSFMLTPLDYVGLEWGWNFSSEQCVEGMI 765

Query: 373  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I T++ +    ++ SIPL   PRR     +   F +    N   +  +    
Sbjct: 766  GIQGRSLRIFTVEKLDNNMLQESIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPATRQ-- 823

Query: 432  VRLLDD-----------------------------QTFEFISTYP------LDTFEYGCS 456
             RL+DD                             Q  E I+T        L+  E   S
Sbjct: 824  -RLIDDSQAQNGEATDLPPADFGYPRATGHWASCIQVVEPITTKSVIFNLDLEDNEAAVS 882

Query: 457  ILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGA 510
            + + SFS  D   +  VGTA    V P  +  + G I ++   EDG+ L+ I + +    
Sbjct: 883  LAAVSFSSQDDETFLVVGTAKDMTVSPPSS--SCGFIHIYRFQEDGRELEFIHKTQVDEP 940

Query: 511  VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIV 567
              +L  F G+LLA I   +++Y     D G ++L  +C     ++   +   QT+G  I+
Sbjct: 941  PLALLGFQGRLLAGIGPILRVY-----DLGMKQLLRKC--QAPVVPKTIVGLQTQGSRII 993

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---K 624
            V D+ +S++ ++YK+++  +   A D  A W S+  ++D +   G +   NL+ VR   K
Sbjct: 994  VSDVRESVTYVVYKYQDNVLIPFADDSIARWTSSTTMVDYETTAGGDKFGNLWLVRCPSK 1053

Query: 625  NSEGATDE--------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIF 674
             SE A ++        E+G L   G  H  E +  F    +   L  + +  G    V++
Sbjct: 1054 VSEQADEDGSGAHLIHEKGYLH--GTPHRLELMVHFYAQDIPTSLHKTQLVAGGRDIVVW 1111

Query: 675  GTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
                G IG+       E   F + L+T L      + G +H  +R +    K V     +
Sbjct: 1112 TGFQGTIGMFVPFASREDVDFFQLLETQLASQQPPLAGRDHLMYRGYYAPVKGV-----I 1166

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E +L L       I+  ++ SV E+ +++ ++
Sbjct: 1167 DGDLCEMYLLLPNDTKLMIAGELDRSVREIERKISDM 1203


>gi|159130328|gb|EDP55441.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus A1163]
          Length = 1225

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 203/815 (24%), Positives = 354/815 (43%), Gaps = 97/815 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  +V+L      Q+ T SG+    S R +++G+ ++E    EL  
Sbjct: 411  LNLVETLNSLNPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFRVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +   SIPL   PRR+    +   F +    N   +  +    
Sbjct: 766  GIQAQNLRIFSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      IST  L+  E   S+ +
Sbjct: 826  IEDSKARNGETNVLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAA 885

Query: 460  CSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSL 514
              FS  D   +  VGTA  +   N P+     + I    EDGK L+ I + + +    +L
Sbjct: 886  VPFSSQDDETFLVVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDL 571
              F G+LLA I   +++Y     D G ++L  +C     +++  +   QT+G  IVV D+
Sbjct: 945  LGFQGRLLAGIGSTLRIY-----DLGMKQLLRKC--QAQVVSKTIVGLQTQGSRIVVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK+++  +     D  + W ++  ++D +   G +   NL+ VR   K SE 
Sbjct: 998  RESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RL+++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            +DGDL E +  L       I+  ++ SV E+ +++
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI 1200


>gi|70992737|ref|XP_751217.1| nuclear mRNA splicing factor [Aspergillus fumigatus Af293]
 gi|74670386|sp|Q4WLI5.1|RSE1_ASPFU RecName: Full=Pre-mRNA-splicing factor rse1
 gi|66848850|gb|EAL89179.1| nuclear mRNA splicing factor, putative [Aspergillus fumigatus Af293]
          Length = 1225

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 203/815 (24%), Positives = 354/815 (43%), Gaps = 97/815 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  +V+L      Q+ T SG+    S R +++G+ ++E    EL  
Sbjct: 411  LNLVETLNSLNPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFRVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +   SIPL   PRR+    +   F +    N   +  +    
Sbjct: 766  GIQAQNLRIFSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      IST  L+  E   S+ +
Sbjct: 826  IEDSKARNGETNVLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAA 885

Query: 460  CSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSL 514
              FS  D   +  VGTA  +   N P+     + I    EDGK L+ I + + +    +L
Sbjct: 886  VPFSSQDDETFLVVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDL 571
              F G+LLA I   +++Y     D G ++L  +C     +++  +   QT+G  IVV D+
Sbjct: 945  LGFQGRLLAGIGSTLRIY-----DLGMKQLLRKC--QAQVVSKTIVGLQTQGSRIVVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK+++  +     D  + W ++  ++D +   G +   NL+ VR   K SE 
Sbjct: 998  RESVTYVVYKYQDNILIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RL+++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLHGAPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            +DGDL E +  L       I+  ++ SV E+ +++
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI 1200


>gi|350630003|gb|EHA18376.1| hypothetical protein ASPNIDRAFT_38018 [Aspergillus niger ATCC 1015]
          Length = 1219

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 206/822 (25%), Positives = 358/822 (43%), Gaps = 97/822 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  VV++      Q+ T SGA    S R +++G+ ++E    EL  
Sbjct: 411  LNLVETINSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQIHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDS 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++
Sbjct: 646  VQALTAAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V   S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKGQTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +  +SIPL   PRR     +   F +    N   A  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      + T  L+  E   SI +
Sbjct: 826  LEDSKSRGGDETVLPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAA 885

Query: 460  CSF-SDDSNVYYCVGTAYVLPEENEP--TKGRILVF-IVEDGK-LQLIAEKETKGAVYSL 514
              F S D   +  VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L
Sbjct: 886  VPFTSQDDETFLVVGTAKDM-TVNPPGSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA---LYVQTRGDFIVVGDL 571
              F G+L+A I   +++Y     D G ++L  +C     ++    + +QT+G  IVV D+
Sbjct: 945  LGFQGRLVAGIGSLLRIY-----DLGMKQLLRKC--QAPVVPKTIVGLQTQGSRIVVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  + W +A  ++D +   G +   NL+ +R   K SE 
Sbjct: 998  RESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RLE++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +DGDL E +  L       I+  ++ SV E+ +++  + RLH
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKISCIYRLH 1207


>gi|299751161|ref|XP_001830098.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
 gi|298409248|gb|EAU91763.2| pre-mRNA-splicing factor rse1 [Coprinopsis cinerea okayama7#130]
          Length = 1205

 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 193/820 (23%), Positives = 356/820 (43%), Gaps = 100/820 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQG-QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 85
            +++   +L P++D  ++      +  ++    G     S +I+ +G+ ++E AS EL G 
Sbjct: 403  LIDELSSLNPVLDAKILKPSLDSEAPKIFAACGRGPASSFKILSHGLEVDEMASSELPGF 462

Query: 86   ---KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
                 +WS +    D +D  LV+SF + T +L++   + +EE +  GF +   TL     
Sbjct: 463  LAPHSLWSTKRMQTDHYDNLLVMSFQNATIVLSIG--ESMEEVKDSGFLTSMPTLAVQQI 520

Query: 143  IYNQLVQVTSGSVR-LVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
              N L+QV +  +R LV S      NEWK P G ++  A  N  QV++A     +VY E+
Sbjct: 521  GENGLIQVHTHGIRHLVDSQV----NEWKVPQGQTIVAANTNRRQVVVALSSAEIVYFEL 576

Query: 202  G-DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 258
              +G L E +  + +   +  L +  + E        AVG   D +VR+ SL PD  L T
Sbjct: 577  DQEGQLNEYQDMKAMGSTVLALGLGEVPEGRLRFPYLAVGC-EDQTVRVMSLDPDSTLET 635

Query: 259  KEHLGGEIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
                     P S+ +      S        ++   L +G LL  +L+   G+LTD +   
Sbjct: 636  ISLQALTAPPSSICIAYMLDASINKVQRSMFVNIGLANGVLLRTVLDGTNGQLTDTRTRF 695

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            LGT+P+ L     K    + A S R  + YS  +K+ ++ +  +       F   + P+ 
Sbjct: 696  LGTKPVRLLRVKLKGEDAILAISSRVWLNYSHQQKMEFTPLACETPECASSFTGESCPEG 755

Query: 371  LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            +    +  L+I T+  +  KL   S+PL   PR+      +R F +     ++ +EE E 
Sbjct: 756  IISIAKNTLSISTVSKLGMKLKQESVPLAFTPRKFVTHPGNRFFYLIESDQRTLSEEEEK 815

Query: 430  -------------------------------HF---VRLLDDQTFEFISTYPLDTFEYGC 455
                                           H+   + + D    + ++T PL   E   
Sbjct: 816  KKLADLNISRDDHPILQLPAKIFGRTRASAGHWASRIHIFDPMEAKTVATLPLKANEAAF 875

Query: 456  SILSCSFSDDSNVYY-CVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGA- 510
            SI    F+     Y+  VGTA    V P +   +  ++   + E   L+L+ E   + + 
Sbjct: 876  SIAVVPFASTGGEYHLVVGTAMHHLVTPPQASASYLKVYKIVNEGTGLELLHETPIQDSE 935

Query: 511  -VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               +L AF G+LLA + + +++Y     D G ++L  +         + + T+G  IV+G
Sbjct: 936  LPRALLAFQGRLLAGVGKALRIY-----DLGKKKLLRKAETKSPTAIVSLATQGSRIVIG 990

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS--- 626
            D+ +S    +YK  E  +     D    W+SA+ ++D +     +   N+F  R +S   
Sbjct: 991  DMQESTLFAVYKEAENRLLIFGDDTQPRWVSAMTMVDYNTVAVGDKFGNIFVNRLDSTIS 1050

Query: 627  --------------EGAT-DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
                          E AT +    + +++  +H+G+ +      SLV       VG    
Sbjct: 1051 DQVDEDPTGAGILHEKATLNGAPHKTKMLAHFHVGDIITSIHKVSLV-------VGGREV 1103

Query: 672  VIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            +++  + G IG++  L  ++ + FL  L+ ++R     + G +H  WR +      V  K
Sbjct: 1104 LLYTGLQGTIGILVPLTSKEDIEFLTMLEQHIRNEQGSLVGRDHLSWRGY-----YVPVK 1158

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +DGDL E++  LS ++   I+  ++ +V ++ K+++++
Sbjct: 1159 AVIDGDLCETYGGLSSSKQSAIASELDRTVGDVLKKLDQM 1198


>gi|322707263|gb|EFY98842.1| Pre-mRNA-splicing factor rse-1 [Metarhizium anisopliae ARSEF 23]
          Length = 1212

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 206/813 (25%), Positives = 367/813 (45%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  V +L  +   Q+ T  G     + R++R+G+ +NE  + EL GI 
Sbjct: 416  LVESIPSMNPLLDCQVANLTGEDAPQIYTVCGNGARSTFRMLRHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRGEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFSTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +      NEW +P   S+  A+ NA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGKV---NEWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRVRSSFLAVGC-DDCTVRILSLDPESTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPSSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKQV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + + TT V   S RP + YS    K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGTTCVLGLSSRPWLGYSDPITKGFVVTPLNYVDLEWGWNFSSEQCEEGVVGI 769

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTFAICS--------LKNQSCA 424
            +   L I +ID +   L  +++ L   P++ I H EQ   + I S        L+ Q  A
Sbjct: 770  QGQSLRIFSIDRLGDTLTQKAVSLTYTPKKLIKHPEQPLFYTIESDNNTLPPDLRAQLMA 829

Query: 425  EESEMHF-VRLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
            + + ++    +L  + F +                       + T  L+  E   S    
Sbjct: 830  DPAVVNGDATVLPPEDFGYPKGNRRWASCINVIDPVSEEPQVVQTVDLENNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 516
             F S D+  +  VGT   V+      ++  I V+   E+G+ L+ I + + +    +L  
Sbjct: 890  PFASQDNESFLIVGTGKDVVVNPRNFSEAYIYVYRFQEEGRELEFIHKTKIEEPALALIP 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F GKLLA + + +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++
Sbjct: 950  FQGKLLAGVGKTLRVYDLGMR-QMLRKAQAEVAPQ-QIVSL--NTQGSRIIVGDIQQGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             + YK     +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 YVTYKPTTNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPPKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL+++  ++  +        SLV       VG    +++  + 
Sbjct: 1066 SGLHLMNARDYLHGTSQRLDLMCHFYTQDIPTSMAKTSLV-------VGGQDVLLWSGLM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+++LR     + G +H  +RS+         K  +DGDL
Sbjct: 1119 GTIGVFIPLISREDADFFQSLESHLRTEDPPLAGRDHLMYRSY-----YAPVKGIIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYTLLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|242772631|ref|XP_002478075.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218721694|gb|EED21112.1| nuclear mRNA splicing factor, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1209

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 203/818 (24%), Positives = 362/818 (44%), Gaps = 97/818 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L PI+D  + DL  +   Q+ T  G     + R +++G+ ++E    EL  
Sbjct: 411  LNLVESVNSLNPIMDCKITDLLAEDAPQIYTICGTGARSTFRTLKHGLDVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++V+SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRKDEFDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   ++  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHILADHR--VNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKRQMSGTVTSLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALNIMSMADSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  + V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFGVSVKGQSAVLALSSRPWLGYSDIQTKSFMLTPLDYVGLEWGWNFSSEQCLEGMV 765

Query: 373  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +    ++ SIPL   PR      +   F +   +N   A  ++   
Sbjct: 766  GIQGQNLRIFSIEKLDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAPATQ--- 822

Query: 432  VRLLDD-------------QTFEF----------------------ISTYPLDTFEYGCS 456
             RLL+D             +TF F                      +S   L+  E   S
Sbjct: 823  TRLLEDSKLQNGEAVIPPAETFGFPRATGHWASCIEVVDPINSKSVLSRLELEENESAVS 882

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            + + SF S D+  +  VGT   V+      + G I ++   EDG+ L+ I + + +    
Sbjct: 883  VAAVSFASQDNETFLVVGTGKDVVTYPRSFSAGFIHIYRFQEDGRELEFIHKTKIEEPPL 942

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVGDL 571
            +L AF G+L+A I + +++Y     D G +++  +C       L + +QT+G  I+V D+
Sbjct: 943  ALLAFQGRLVAGIGKNLRVY-----DLGMKQMLRKCQVEASPNLIVGLQTQGSRIIVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  A W +A  ++D +   G +   NL+ VR   K SE 
Sbjct: 998  QESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPKKVSEE 1057

Query: 629  ATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            + ++  G               RL+++  ++  +        +LV       VG    ++
Sbjct: 1058 SDEDGSGAHLIHERSYLQGTPNRLDLMVHFYTQDIPTSLHKTNLV-------VGGRDILV 1110

Query: 674  FGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +  + G IG +I  +  E   F + L+  L      + G  H  +RS+      V  K  
Sbjct: 1111 WTGLQGTIGMMIPFISREDVDFFQNLEMQLASQNPPLAGREHLIYRSY-----YVPVKGV 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL ES+  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1166 IDGDLCESYFLLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|321260749|ref|XP_003195094.1| hypothetical protein CGB_G1120W [Cryptococcus gattii WM276]
 gi|317461567|gb|ADV23307.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 1276

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 200/768 (26%), Positives = 359/768 (46%), Gaps = 78/768 (10%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQG 84
            E+LER++N+ P+ D CVV  E      +V  SGA +  SLR+VR+G+G+ E  +++ L  
Sbjct: 492  EILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQGLHD 551

Query: 85   IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 144
            ++ MWSL   TD    + L++S  + T +L +  +  +  T    F S+T          
Sbjct: 552  VQKMWSL---TDSTATSRLLLSTSNSTVLLQLQPDISVIPTTDIIFNSETLAAGILPG-A 607

Query: 145  NQLVQVTSGSVRLVSS-TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
              L Q+T   + L S   S +L  + +      +  A   A   ++A  GG+LV   + +
Sbjct: 608  ELLAQITPRGLFLWSDLNSGQLEAQVEVDKETEIVCAQVTAEWAVVAKNGGNLVVFHVSN 667

Query: 204  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 263
                      ++ E+S + I+    + S S I A+  WT  +V +++L  ++      + 
Sbjct: 668  TGFNPKGTIDVKEEVSAVAISR--NSDSSSPIIAISTWTAKTV-VYTLSQIS----SGVD 720

Query: 264  GEIIPRSVLLCAFEGISY--------LLCALGDGHLLNFLLNMKTGELTD------RKKV 309
            G  IP      + +  S+        LL  L +G L  + L+       D       K  
Sbjct: 721  GLSIPSKSSATSLQLRSHPSYPAGIQLLSGLDNGLLQIYDLDKDDMGGVDGLVVKSSKTT 780

Query: 310  SLGTQPITLR----TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
            SLG +P+ L     T   +    V A ++R +VI+ S  ++ +S+VN+K +      N++
Sbjct: 781  SLGLRPLALHPCEITGGDEKVISV-ALTERMSVIFESKDRIEFSSVNIKNIMAAAAVNTS 839

Query: 366  AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCA 424
            + P     ++   L++  I+ ++KLH+++   G E   ++ + ++ +  A C L  ++  
Sbjct: 840  SGPVLALFSRTSGLSLLKINSLKKLHVQTCDTGNESISKLNYMDEYKAIA-CGLTRRTQL 898

Query: 425  EES---EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEE 481
             +    E +FV++ D  + E +S++ L   E   S+ S       ++Y  VGTA++ P++
Sbjct: 899  RDGDVEEENFVQIRDGTSLEPLSSFTLRERELVTSLRSVFLV--GSMYLAVGTAFLPPDD 956

Query: 482  NEPT-----------KGRILVFIVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAA 524
             E +           +GR+L+  +++G       +++ AE  T GAVY+L   +G L  A
Sbjct: 957  GEDSSWDEGNLAVVKEGRVLLLEIKEGDAGGGWDVKIKAELTTVGAVYALEEIHGFLAVA 1016

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHHG-----HILALY-VQTRGD-FIVVGDLMKSISL 577
               K+ +++    D  + EL+             + AL+   TR +  ++VGD M+S+ +
Sbjct: 1017 AGSKLTMHR---LDHNSVELEETSSWASAYVISSLSALHPSHTRPEGALIVGDGMRSVIV 1073

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERG 635
            L     +G I +  R+   + ++A+ +L D  D  + ++ + NL T R N          
Sbjct: 1074 LNVDEGDGMIYDDERNMATHGVTALGLLKDKGDAVVVSDAHSNLLTYRLNQ--------- 1124

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 695
            +LE    + L E V RF++GSLV      ++  IP V+F T  G +GVI  L       L
Sbjct: 1125 KLERAATFGLHEEVTRFQNGSLVPTTTAPEI-IIPDVLFATREGRLGVIGELGTMSSRTL 1183

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            + LQ N+ K+ KG G +    WR   +     D   F+DGD ++ FLD
Sbjct: 1184 DDLQRNMGKIWKGPGDVGWSNWRRAGSNLVGKDTAGFVDGDFVQKFLD 1231


>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum]
 gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]
          Length = 1219

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 201/864 (23%), Positives = 365/864 (42%), Gaps = 130/864 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L        V+ +E   +L PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRSLRNLVL--------VDEME---SLSPILSCRVADLAGEDTPQLYMLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W+++  +DD +D +++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV  G +R + S  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSALSDDALVQVYPGGIRHICSDKR--VNEWKAPGKKTIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTEVK-HAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG L Y E+   G L E K   ++  ++ C+ +  +      S   AVG
Sbjct: 549  INQRQVVIALSGGELAYFEMDPTGQLHEYKERKRMNADVVCMALANVAPGEQLSLFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEII----------------PRSVLLCAFEGISYLL 283
            +  D +VRI SL   + +    + G  +                P +    +     YL 
Sbjct: 609  L-ADSTVRIISLDPSDCLAPRSIQGLPVCAESLCIVEMGCTDREPDNAAAASTTSTLYLN 667

Query: 284  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 343
              L +G LL  +L+  +GEL+D +   LG++P+ L     + +  V A S R  + Y   
Sbjct: 668  IGLTNGALLRNVLDPVSGELSDTRTRYLGSRPVKLFRIRMQQSEAVLAMSSRSWLSYYYQ 727

Query: 344  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPR 402
             +   + ++ + + +   F+S   P+ +       L I  ++ +  +  + S PL   PR
Sbjct: 728  SRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPLEYTPR 787

Query: 403  R-ICHQEQSRTFAICSLKN------------------QSCAEESEMHFVR-----LLDDQ 438
            + I H E +    I +  N                  +  A E E    +      L++ 
Sbjct: 788  KFIIHPESNNLLIIETEHNAYTEETKKQRRLQMAEEMKEAAGEEEQELAKEMADAFLNED 847

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG--------TAYVLPEENEPTKGRIL 490
              E I + P        S L         V+ C+         ++ ++  +N+P +   L
Sbjct: 848  LPESIFSAPKAGHGMWASTLKIMDPVQGIVHKCIRLEQNEAAMSSVLVKFQNQPQQTLFL 907

Query: 491  VFIVEDG-----------------------KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
            +  +                          +L+ +          +L A+NG LLA + +
Sbjct: 908  IVGISKDFQLNPRHCNTGFLDTYKMDPMGRELEFVHRTPVDEVPMALCAYNGLLLAGVGR 967

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEG 585
             ++LY     D G ++L  +C  + HI    + +Q  G  I V D+ +S+ ++ YK  E 
Sbjct: 968  MLRLY-----DMGKKKLLRKC-ENKHIPNAIVNIQAMGKRIFVSDVQESVFMVRYKRAEN 1021

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE-----------R 634
             +   A D +  W++   +LD D    A+   N+  +R     + D E           R
Sbjct: 1022 QLIIFADDTHPRWVTCNCVLDYDTVAVADKFGNIAILRLPPNVSDDVEEDPTGHKSLWDR 1081

Query: 635  GRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
            G L       + +  +H+GE V   +  +L+        G   ++I+ T++G +GV+   
Sbjct: 1082 GLLNGASQKADTIATFHVGETVTWLQKATLI-------PGGWESLIYTTLSGSVGVLVPF 1134

Query: 688  -PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
               E + F + L+ ++R     + G +H  +RS+         KN +DGDL E +  L  
Sbjct: 1135 TSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQYNSLEP 1189

Query: 747  TRMDEISKTMNVSVEELCKRVEEL 770
             +   I+  ++ +  E+ K++E++
Sbjct: 1190 VKQKSIASDLDRTPAEVSKKLEDI 1213


>gi|324501533|gb|ADY40680.1| Splicing factor 3B subunit 3 [Ascaris suum]
          Length = 1214

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 202/862 (23%), Positives = 386/862 (44%), Gaps = 132/862 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L+ L            V+++  +L P++   + DL  +   Q+    G    
Sbjct: 385  TFFFAPRGLLNL-----------AVVDQIDSLCPLISCHIDDLANEDAPQLYALCGRSAR 433

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +L+++RNG+ + E A  EL G    +W+++ + DD +D+ +VVSF++ T +L++   + 
Sbjct: 434  SALKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDKYDSHIVVSFVNATLVLSIG--ET 491

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + L+QV    +R + +  R   NEWK+P   ++    
Sbjct: 492  VEEVTDSGFLGTTPTLGCGLIGDDALLQVYPDGIRHIRADRRV--NEWKAPGKRTIIKCA 549

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV +A  GG +VY E+   G L E  +  +L  ++ C+ ++ I E    S+   VG
Sbjct: 550  LNRRQVAIALAGGEIVYFELDVTGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLTVG 609

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAF---EGIS----YLLCALGDG 289
            +  D +VRI SL     L  ++ + L  E  P S+++      EG S    +L   L +G
Sbjct: 610  L-ADKTVRIISLDPQDCLAPLSMQALPSE--PESIIVLEMFGGEGQSASTVHLNIGLQNG 666

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
             LL   ++  TGELTD +   LGT+ + L     ++   + AAS R  ++Y+   +   +
Sbjct: 667  CLLRTTVDQVTGELTDNRTRYLGTRSVNLFRVRIQSKDAIMAASSRAWLLYNYQSRFHLT 726

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSI-PLGEHPRR-ICH- 406
             ++   + +   F+S   P+ +    E  L I +++ +  +  +++ PL   PRR I H 
Sbjct: 727  PLSYTALEYAAGFSSEQCPEGIVAIAENTLRILSLEKLGAVFNQAVYPLDYTPRRMIIHK 786

Query: 407  --------------------QEQSRTFAICSLKNQSCAEESEMHFV-------------- 432
                                QE+ +  A   ++    A+E++   V              
Sbjct: 787  ASGNLIVIETDHAAFTAKGKQERRKQLANELMEVAKEADEADEQAVKEMAEAILTEKVNE 846

Query: 433  -----------------RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-YYCVGT 474
                             R++     E +S +P    E   S+    F + ++  +  VG 
Sbjct: 847  REMGAPKNQKGKWASTVRIMRSSDGETLSLFPFAEDEAAFSLAMVQFQNQNDAQFILVGC 906

Query: 475  AYVLPEENEPTK---GRILVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
               L  + +P K   G I  F++ +   KL+ +    T   V +++ F G  L  + +KI
Sbjct: 907  GLGL--QLKPRKSHGGSIYTFLLANNGSKLEFLHRTPTDEVVNAVHDFRGMALVGVGKKI 964

Query: 530  QLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
            +LY     D G ++L ++C +    +  + +++ G  IVV D  +S+  + YK ++  + 
Sbjct: 965  RLY-----DLGKKKLLAKCENKQLPVQVVDIRSMGQRIVVSDSQESLHFMRYKKQDNQLS 1019

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERGR 636
                D +  +++ + ILD D  +   + F    V +  +G T+E            +RG 
Sbjct: 1020 IFCDDTSPRFVTCICILDYDT-VAVGDRFGSIAVLRLPKGVTEEVQEDPTGVRALWDRGN 1078

Query: 637  L-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LP 688
            L       E +G++++G+ V   +  SLV        G    +++ T++G IG++   + 
Sbjct: 1079 LNGASQKVEHIGQFYVGDTVTSMQKTSLV-------PGANDCLVYTTISGTIGMLVPFVS 1131

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
             +++ F + L+ +LR     + G +H  +RSF    K +     +DGDL E +  +   +
Sbjct: 1132 RDEFDFFQNLEMHLRVEFPPLCGRDHLAFRSFYFPVKCI-----IDGDLCEQYALMPLDK 1186

Query: 749  MDEISKTMNVSVEELCKRVEEL 770
               +++ +     E+ K++E++
Sbjct: 1187 QKAVAEELGRKPAEIHKKLEDI 1208


>gi|402222132|gb|EJU02199.1| hypothetical protein DACRYDRAFT_21931 [Dacryopinax sp. DJM-731 SS1]
          Length = 1209

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 196/810 (24%), Positives = 347/810 (42%), Gaps = 99/810 (12%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSS 94
            PIVD  V +L      Q+    G     S R++R+G+ + E  S EL GI   +W+++  
Sbjct: 417  PIVDAKVTNLLNTDTPQIFAACGRGARSSFRMLRHGLDVEETVSSELPGIPNAVWTVKLK 476

Query: 95   TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
             DD +D ++++SF++ T +L++   + +EE    GF S + T+       + L+QV    
Sbjct: 477  ADDQYDAYIILSFVNGTLVLSIG--ETIEEVSDTGFLSSSPTIAVQQIGEDSLLQVYPHG 534

Query: 155  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK-HA 212
            +R V S  R   NEW+ P   ++  AT N+ QV +A     LVY E+  +G L E +   
Sbjct: 535  IRHVLSDRRV--NEWRCPQHTTIVAATTNSRQVAIALSSAQLVYFELDLEGQLNEYQDRK 592

Query: 213  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNL--ITKEHLGGEIIPR 269
             L   +  + I  + E    +   AVG   D +VRI SL PD  L  I+ + L     P 
Sbjct: 593  SLGSGVLAMSIAEVPEGRQRTPYLAVGC-EDQTVRIISLDPDTTLENISLQALTAP--PS 649

Query: 270  SVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
            S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L   
Sbjct: 650  SICVAEIMDASIDKNQPTMFVNIGLQNGVLLRTVLDPVNGQLTDTRTRFLGSRPVRLIRV 709

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
            +      + A S R  + Y+    L ++ +    + +   F++   PD L       L I
Sbjct: 710  NVHGLPSILALSSRSWLNYTYQNLLHFTPLIFDPLEYAWSFSAELCPDGLIGISGNVLRI 769

Query: 382  GTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE------------ 428
              + ++ QKL    IPL   PR++      R F +    ++  + E+             
Sbjct: 770  FQVPNLGQKLKQDVIPLSYTPRKMLQHPTERLFYVIESDHRVLSPEAADKKLQKLKSTGQ 829

Query: 429  ------------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-S 463
                                       ++++D      +   PLD  E   S+   +F +
Sbjct: 830  RLDQEVIDLPADIFGRPRADAGTWASCIQIIDPANVRSVLEVPLDNNEAAFSLAITTFIA 889

Query: 464  DDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGK 520
                ++  VGTA  V+        G +  + I EDG+ L+ + + E      +L +F G+
Sbjct: 890  RPGELFLVVGTAQDVIVSPKSCKSGFLRTYKISEDGRSLEFLHKTEVDDVPLALLSFQGR 949

Query: 521  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLI 579
            L+A I + ++++     D G + L  +C +     A+  + T+G  I+VGD+ +SI    
Sbjct: 950  LVAGIGKALRIF-----DMGKKRLLRKCENKSFATAIVTLSTQGSRIIVGDMAESIYFAT 1004

Query: 580  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG- 635
            YK  E  +   A D    W++A  ++D D     +   N+F  R   K  E   ++  G 
Sbjct: 1005 YKPPENRLLIFADDSQPRWITASAMVDYDTVCAGDKFGNVFVNRLPPKVGEQVDEDPTGA 1064

Query: 636  --------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI 681
                          +  ++  Y++G+ +      +LV        G    V++  ++G I
Sbjct: 1065 GVLHEKGLFMGAPHKTNMLAHYYVGDIITSMHKVALV-------TGGRDIVLYTGLHGTI 1117

Query: 682  GV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            GV I  +  E   F+  L+ ++R     + G +H  +R +      V  K  +DGDL E 
Sbjct: 1118 GVLIPFISKEDVDFIRTLEQHMRTEAPSLVGRDHLTYRGY-----YVPVKGVVDGDLCEL 1172

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            F  L   +   I+  ++ +  E+ K++E+L
Sbjct: 1173 FSLLPTQKQQSIAGELDRTYSEVLKKLEQL 1202


>gi|429329284|gb|AFZ81043.1| CPSF A subunit region domain-containing protein [Babesia equi]
          Length = 1175

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 196/809 (24%), Positives = 342/809 (42%), Gaps = 96/809 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            +++++   +L  I D  V D++  GQ Q+    G     SLR++R GI I   AS EL G
Sbjct: 395  LQLVDELSSLSAITDMKVADIQGLGQHQIFLGCGRGSRSSLRVLRYGIAIEGLASSELPG 454

Query: 85   -IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
              K +W++RSS +  +D F++V F  E   L +++ + +EE     F +   TL      
Sbjct: 455  RPKSVWTVRSSFESAYDGFIIVGF--EGNTLVLSVGEAVEEVTDSCFLTSITTLHVALMG 512

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
                +QV    +R V     +   EW++P    V VA +N  QV+L   GG ++Y EI D
Sbjct: 513  DGSFIQVHDAGIRHVYD---QRVKEWRAPSSKRVKVAASNDRQVILGLSGGDVIYFEIDD 569

Query: 204  -GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEH 261
             G L E     L  EISCLD+ P  +    +   A+G   D SVR+ +L   L +++ + 
Sbjct: 570  SGNLVEYAKKSLSVEISCLDLQPTPKGRILANFMAIGTL-DNSVRVLTLDKSLKVVSTQI 628

Query: 262  LGGEIIPRSVLLCAF----EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
            L     P SV +  F      + YL   L  G +L   ++  +G L+D++   LG + + 
Sbjct: 629  LSNNSTPESVCISEFAVGDSSLVYLHVGLNTGVMLRSTVDPISGALSDQESRFLGGRAVK 688

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE-------VSHMCPFNSAAF--- 367
             R  S  ++  + A SD+P +IY+    LL S +N+         +S +CP    A    
Sbjct: 689  FRRVSLGSSFAIVALSDKPWLIYTHRGILLVSPINVGTLESADSLISPICPDGFVAVSGN 748

Query: 368  ------------------------PDSLAIAKEGELTIGTIDDI--------------QK 389
                                    P  L +      ++G+++ +              Q 
Sbjct: 749  TLRIFRCTSLGETFAESQLPLTYTPRKLVLMPSEAPSVGSLNYMLAIVESDHARYNEDQS 808

Query: 390  LHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPL 448
            L I+++  G E P   C       F     K  SC        +R+++  T E ++    
Sbjct: 809  LEIKNVHAGIELPSDYCESLDYTDFKAEPGKWGSC--------LRIVNPLTLETVAKLLF 860

Query: 449  DTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP--TKGRILVFIV-EDGKLQLIAEK 505
            +T E   ++ +     D      VGTA  +  + +P    G + V+    + +++L+   
Sbjct: 861  ETDE--AAMCAQVVVLDGIQCLVVGTAIGMNLKGDPDSVSGYLRVYAYGANYEIRLLHAT 918

Query: 506  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 565
               G   +L  + GKL+ A+  +++LY    R    +     C  HG I   ++   G  
Sbjct: 919  PITGVPRALAGYEGKLICALGSRLRLYALGKRQLLLKAEHRTCTDHGFI---WISVCGSR 975

Query: 566  IVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            I  GD+ +   LL    Y  +    E         W+S  E LD    +G +   +LF  
Sbjct: 976  IFAGDIREGFQLLRLRFYAEDAAEFEWIGHSTGPRWLSCCEQLDYHTVIGGDKFDSLFIA 1035

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
            R   E  T  +  + E   ++HLG+        + + ++  +++ Q P VI+ T+ G IG
Sbjct: 1036 RVPQEEFT--KATQFENHAQFHLGDL------PTAISKVSFNNMSQ-PIVIYSTILGSIG 1086

Query: 683  VIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 741
                  ++  L  ++ L+  +      + G  H  +RS+         +N +DGDL E  
Sbjct: 1087 AFIPYANKDELDLMQHLEMIMANEHPPLCGREHAFFRSY-----YYPVQNIVDGDLCEQV 1141

Query: 742  LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              L      +I+  ++ +V  L ++V+++
Sbjct: 1142 KTLPEAVQRKIATQLDTNVHTLLRKVDDV 1170


>gi|195428692|ref|XP_002062402.1| GK16677 [Drosophila willistoni]
 gi|194158487|gb|EDW73388.1| GK16677 [Drosophila willistoni]
          Length = 1273

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 197/873 (22%), Positives = 361/873 (41%), Gaps = 139/873 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PIV   V DL  +   Q+    G    
Sbjct: 429  TFFFAPRALKNLVL-----------VDELPSFAPIVTSQVADLANEDTPQLYVLCGRGPR 477

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 478  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEFDAYIIVSFVNATLVLSIG--ET 535

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 536  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRV--NEWKAPGKKSITKCA 593

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + +    S   +VG
Sbjct: 594  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLSVG 653

Query: 240  MWTDISVRIFSLPDLNLI-------------------------TKEHLGGEIIPRSVLLC 274
            +  D +VRI SL   N +                         T   +G E +P      
Sbjct: 654  L-ADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTTAVGDEDVPAQRSGG 712

Query: 275  AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
            + +G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S 
Sbjct: 713  SNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSS 772

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 773  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 832

Query: 394  SIPLGEHPRR-ICHQEQSRTFAICS--------------------LKNQSCAEESEMHF- 431
            + PL   PR  + H +  R     +                    ++N +  EE E+   
Sbjct: 833  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRNAAGDEERELARE 892

Query: 432  ----------------------------VRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
                                        +R LD    + +   PL   E     ++L  S
Sbjct: 893  MANAFISEALPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFNVPLTQNEAIMSMAMLKFS 952

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E +    +L  F 
Sbjct: 953  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFLHRTEIEEIPGALCGFQ 1012

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 1013 GRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1067

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1068 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1126

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1127 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1179

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1180 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1234

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1235 CEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1267


>gi|195586770|ref|XP_002083143.1| GD13507 [Drosophila simulans]
 gi|194195152|gb|EDX08728.1| GD13507 [Drosophila simulans]
          Length = 1227

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 202/873 (23%), Positives = 360/873 (41%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            + +D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-SDNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGGLDDDAPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S 
Sbjct: 667  NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + + + PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTEIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|357528934|sp|Q5B1X8.2|RSE1_EMENI RecName: Full=Pre-mRNA-splicing factor rse1
 gi|259485100|tpe|CBF81885.1| TPA: Pre-mRNA-splicing factor rse1
            [Source:UniProtKB/Swiss-Prot;Acc:Q5B1X8] [Aspergillus
            nidulans FGSC A4]
          Length = 1209

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 208/815 (25%), Positives = 353/815 (43%), Gaps = 91/815 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P+VD  VV++      Q+ T SG     + R +++G+ ++E    EL  
Sbjct: 411  LNLVEAINSLNPLVDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++V+SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRADEFDAYIVLSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQIHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    S      YL   L  G  L   L+  TGEL+D +   LG++
Sbjct: 646  VQALTAAPSALNIIAMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
             + L   S    T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  AVKLFQVSVTGQTAVLALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +  +SIPL   PR      +   F +    N   +  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSPATR--- 822

Query: 432  VRLLDDQTFEFIST---------YP--------------------------LDTFEYGCS 456
             RLL+D       T         YP                          L+  E   S
Sbjct: 823  ARLLEDSKARGGDTTVLPPEDFGYPRGTGHWASCIQIIDPLDAKAVVGAVELEENEAAVS 882

Query: 457  ILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAV 511
            I +  F S D   +  VGTA  +   N P+   G I ++   EDGK L+ I + + +   
Sbjct: 883  IAAVPFTSQDDETFLVVGTAKDM-TVNPPSSAGGYIHIYRFQEDGKELEFIHKTKVEEPP 941

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGD 570
             +L  F G+LLA +   +++Y     D G ++L  +C       A+  +QT+G  IVV D
Sbjct: 942  LALLGFQGRLLAGVGSVLRIY-----DLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSD 996

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSE 627
            + +S++ ++YK+++  +     D  A W +A  ++D +   G +   NL+ VR   K SE
Sbjct: 997  VRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASE 1056

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTVIFGT 676
             A +E  G   +    +L    NR     L++ +   D+           G    +++  
Sbjct: 1057 EADEEGSGAHLIHDRGYLQGTPNRLE---LMIHVFTQDIPTSLHKTQLVAGGRDILVWTG 1113

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
              G IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DG
Sbjct: 1114 FQGTIGILVPFVSREDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDG 1168

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E +  LS      I+  ++ SV E+ +++ ++
Sbjct: 1169 DLCEQYFLLSNDTKMMIAAELDRSVREIERKISDM 1203


>gi|195336406|ref|XP_002034829.1| GM14250 [Drosophila sechellia]
 gi|194127922|gb|EDW49965.1| GM14250 [Drosophila sechellia]
          Length = 1227

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 202/873 (23%), Positives = 359/873 (41%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGGLDDDAPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S 
Sbjct: 667  NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + + + PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTEIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|195490209|ref|XP_002093045.1| GE20993 [Drosophila yakuba]
 gi|194179146|gb|EDW92757.1| GE20993 [Drosophila yakuba]
          Length = 1227

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 202/873 (23%), Positives = 358/873 (41%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGALDDDAPAPRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S 
Sbjct: 667  NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + + + PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTEIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|400597418|gb|EJP65151.1| CPSF A subunit region [Beauveria bassiana ARSEF 2860]
          Length = 1212

 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 199/806 (24%), Positives = 357/806 (44%), Gaps = 91/806 (11%)

Query: 34   LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLR 92
            + P++D  V +L  +   Q+ +  G     + R +++G+ +NE  + EL G+   +W+L+
Sbjct: 423  MNPLLDCKVANLTGEDAPQIYSICGNGARSTFRTIKHGLEVNEIVASELPGVPSAVWTLK 482

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
             ++D+ +DT++V+SF + T +L++   + +EE    GF +   T+       + L+QV  
Sbjct: 483  LNSDEQYDTYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHP 540

Query: 153  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKH 211
              +R + + +    NEW +P   S+  A+ NA QV +A   G +VY E+  DG L E   
Sbjct: 541  RGIRHIRNGNV---NEWSAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDSDGSLAEYDE 597

Query: 212  AQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
             +  +  ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P 
Sbjct: 598  KKEMFGTVTALSLGEVPEGRVRSSFLAVGC-DDATVRILSLDPESTLENKSVQALTAAPT 656

Query: 270  SVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 323
            S+ +   +  S      YL   L  G  L  +L+  TG+L+D ++  LG +P+ L   S 
Sbjct: 657  SLAIIPMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGDLSDTRQKFLGPKPVRLFQVSV 716

Query: 324  KNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
               T V   S RP + Y+         + +N  ++     F+S    D +   +   L I
Sbjct: 717  GGRTCVLGLSSRPWLGYADPITNSFEITPLNYVDLEWGWNFSSEQCEDGVVGIQGQSLRI 776

Query: 382  GTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV-------- 432
             +ID + +  I+ SIPL   P++         F      N +   + +   +        
Sbjct: 777  FSIDRLGETLIQSSIPLTYTPKKFVKHPSEPLFYTIEADNHTLPPDLQAKLLADPAAVNG 836

Query: 433  --RLLDDQTF----------------EFISTYP-------LDTFEYGCSILSCSF-SDDS 466
              ++L  + F                + +S  P        +  E   S    SF S D+
Sbjct: 837  DAKVLPPEEFGHPRGNRRWASCISVVDPVSEEPSVLQKVDFENNEAAVSAAVVSFASQDN 896

Query: 467  NVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLA 523
              +  VGT   ++      ++  I ++  ++G  +L+ I + + +    +L AF GKLLA
Sbjct: 897  ESFLVVGTGKDMILNPRSSSEAYIYIYRFQEGGRELEFIHKTKIEEPAMALLAFQGKLLA 956

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
             I + +++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + ++L++YK  
Sbjct: 957  GIGKTLRMYDLGMR-QLLRKAQAEVVPQ-QIVSL--NTQGSRIVVGDVQQGVTLVVYKPA 1012

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG----- 635
               +   A D  A W +   ++D +   G +   N+F VR   K SE A +E+ G     
Sbjct: 1013 SNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNMFIVRSPAKASEEADEEQAGLHLVN 1072

Query: 636  ----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-I 684
                      RLE++  +   +        SLV       VG    +++  + G IGV I
Sbjct: 1073 ARDYLHGAQHRLELMCHFFTQDVPTSINKTSLV-------VGGQDVLLWSGIMGTIGVFI 1125

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
              +  E   F + L+ +LR     + G +H  +RS+    K V     +DGDL E F  L
Sbjct: 1126 PFVSREDADFFQSLEQHLRTEDAPLAGRDHLMYRSYYAPVKGV-----IDGDLCERFAAL 1180

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   ++  ++ SV E+ +++ ++
Sbjct: 1181 PNDKKQMMAGELDRSVREIERKISDI 1206


>gi|195169735|ref|XP_002025674.1| GL20829 [Drosophila persimilis]
 gi|194109167|gb|EDW31210.1| GL20829 [Drosophila persimilis]
          Length = 1225

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 203/874 (23%), Positives = 356/874 (40%), Gaps = 144/874 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRTLKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRV--NEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + +    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTSAGALDDDAPPQRS 666

Query: 278  ----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
                G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S
Sbjct: 667  GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMS 726

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  +
Sbjct: 727  SRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQ 786

Query: 394  -SIPLGEHPRR-ICHQEQSRTFAICSLKN------------------QSCAEESEMHFVR 433
             + PL   PR  + H +  R     +  N                  +S A + E    R
Sbjct: 787  VAFPLQFTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELAR 846

Query: 434  LLDDQTFEFIS-TYPLDTFEY--------GCSILSC------------------------ 460
             + +    FI+   P D F          G S + C                        
Sbjct: 847  EMANA---FINEVLPEDVFSAPKAGAGVCGASQIRCPGTPCMGQTMFKTRAIMSMAMVKF 903

Query: 461  SFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAF 517
            S + D   Y  VG A  L      ++G  L ++ ++     L+ +   E      +L  F
Sbjct: 904  SVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPTCSSLEFMHRTEIDEIPGALCGF 963

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 576
             G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+ 
Sbjct: 964  QGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF 1018

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE---- 632
             L Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+    
Sbjct: 1019 FLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDED 1077

Query: 633  --------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
                    +RG L       E +  +H+GE +   +  +L+        G    +I+ T+
Sbjct: 1078 PTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYSTL 1130

Query: 678  NGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
            NG +G        E Y F + L+ ++R     + G +H  +RS          KN LDGD
Sbjct: 1131 NGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGD 1185

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1186 LCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1219


>gi|37359734|dbj|BAC97845.1| mKIAA0017 protein [Mus musculus]
          Length = 1122

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 198/812 (24%), Positives = 353/812 (43%), Gaps = 123/812 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401  PRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC 460
            PR+     +S    I    + +  E ++    +                       ILS 
Sbjct: 785  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQ----------------------QILSP 822

Query: 461  SFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK 520
                   VY      Y L    E              KL+ + +   +    ++  F G+
Sbjct: 823  RSVAGGFVY-----TYKLVNNGE--------------KLEFLHKTPVEEVPAAIAPFQGR 863

Query: 521  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISL 577
            +L  + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   
Sbjct: 864  VLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIW 916

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE--- 632
            + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE   
Sbjct: 917  VRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPT 976

Query: 633  ------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                  +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G
Sbjct: 977  GNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSG 1029

Query: 680  VIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG++     +E + F + ++ +LR     + G +H  +RS+         KN +DGDL 
Sbjct: 1030 GIGILVPFTSYEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLC 1084

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 1085 EQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 1116


>gi|212531303|ref|XP_002145808.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
 gi|210071172|gb|EEA25261.1| nuclear mRNA splicing factor, putative [Talaromyces marneffei ATCC
            18224]
          Length = 1209

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 202/818 (24%), Positives = 365/818 (44%), Gaps = 97/818 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L PI+D  + D   +   Q+ T  G     + R +++G+ ++E    EL  
Sbjct: 411  LNLVESINSLNPIMDCKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++V+SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRNDEFDAYIVLSFTNGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   ++  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHILADHR--VNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKRQMSGTVTSLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ ++   +  S     YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALNIMSMIDSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K    V A S RP + YS    K  + ++++   +     F+S    + + 
Sbjct: 706  PVKLFGVSVKGQPAVLALSSRPWLGYSDVQTKSFMLTSLDYVGLEWGWNFSSEQCLEGMV 765

Query: 373  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +    ++ SIPL   PR      +   F +   +N   A  ++   
Sbjct: 766  GIQGQNLRIFSIEKLDNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAPATQ--- 822

Query: 432  VRLLDD-------------QTFEF----------------------ISTYPLDTFEYGCS 456
             RLL++             +TF +                      +S   L+  E   S
Sbjct: 823  TRLLEESKLQNGEAVIPPAETFGYPRATGHWASCIEVVDPVNAKSVLSRLELEENESAVS 882

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            I + SF S D+  +  VGT   V+      + G I ++   EDG+ L+ I + + +    
Sbjct: 883  IAAVSFASQDNETFLVVGTGKDVVTYPRSFSAGFIHIYRFQEDGRELEFIHKTKIEEPPL 942

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDL 571
            +L AF G+L+A I + +++Y     D G +++  +C       L + +QT+G  I+V D+
Sbjct: 943  ALLAFQGRLVAGIGKNLRIY-----DLGMKQMLRKCQVEAVPNLIVGLQTQGSRIIVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  A W +A  ++D +   G +   NL+ VR   K S+ 
Sbjct: 998  QESVTYVVYKYQENQLIPFVDDVIARWTTATTMVDYETTAGGDKFGNLWLVRCPQKASDD 1057

Query: 629  ATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            + ++  G               RL ++  Y+  +        +LV       VG    ++
Sbjct: 1058 SDEDGSGAHLIHERSYLQGTANRLNLMIHYYTQDIPTSLHKTNLV-------VGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +  + G IG++   +  E   F + L+T L      + G +H  +RS+      V +K  
Sbjct: 1111 WTGLQGTIGIMVPFISREDVDFFQNLETQLASQNPPLAGRDHLIYRSY-----YVPSKGV 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL ES+  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1166 IDGDLCESYFLLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|67538564|ref|XP_663056.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
 gi|40743422|gb|EAA62612.1| hypothetical protein AN5452.2 [Aspergillus nidulans FGSC A4]
          Length = 1226

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 208/812 (25%), Positives = 351/812 (43%), Gaps = 91/812 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P+VD  VV++      Q+ T SG     + R +++G+ ++E    EL  
Sbjct: 411  LNLVEAINSLNPLVDSKVVNISEDDAPQIFTVSGTGARSTFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++V+SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRADEFDAYIVLSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQIHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFELDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDTTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    S      YL   L  G  L   L+  TGEL+D +   LG++
Sbjct: 646  VQALTAAPSALNIIAMADSSSGGTTLYLHIGLHSGVYLRTALDEVTGELSDTRTRFLGSK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
             + L   S    T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  AVKLFQVSVTGQTAVLALSSRPWLGYSDTQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +  +SIPL   PR      +   F +    N   +  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQQSIPLAYTPRHFIKHPEEPLFYVIEADNNVLSPATR--- 822

Query: 432  VRLLDDQTFEFIST---------YP--------------------------LDTFEYGCS 456
             RLL+D       T         YP                          L+  E   S
Sbjct: 823  ARLLEDSKARGGDTTVLPPEDFGYPRGTGHWASCIQIIDPLDAKAVVGAVELEENEAAVS 882

Query: 457  ILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAV 511
            I +  F S D   +  VGTA  +   N P+   G I ++   EDGK L+ I + + +   
Sbjct: 883  IAAVPFTSQDDETFLVVGTAKDM-TVNPPSSAGGYIHIYRFQEDGKELEFIHKTKVEEPP 941

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGD 570
             +L  F G+LLA +   +++Y     D G ++L  +C       A+  +QT+G  IVV D
Sbjct: 942  LALLGFQGRLLAGVGSVLRIY-----DLGMKQLLRKCQAAVAPKAIVGLQTQGSRIVVSD 996

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSE 627
            + +S++ ++YK+++  +     D  A W +A  ++D +   G +   NL+ VR   K SE
Sbjct: 997  VRESVTYVVYKYQDNVLIPFVDDSIARWTTAATMVDYETTAGGDKFGNLWLVRCPKKASE 1056

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----------GQIPTVIFGT 676
             A +E  G   +    +L    NR     L++ +   D+           G    +++  
Sbjct: 1057 EADEEGSGAHLIHDRGYLQGTPNRLE---LMIHVFTQDIPTSLHKTQLVAGGRDILVWTG 1113

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
              G IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DG
Sbjct: 1114 FQGTIGILVPFVSREDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----IDG 1168

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            DL E +  LS      I+  ++ SV E+ +++
Sbjct: 1169 DLCEQYFLLSNDTKMMIAAELDRSVREIERKI 1200


>gi|325189950|emb|CCA24429.1| splicing factor putative [Albugo laibachii Nc14]
          Length = 1644

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 197/820 (24%), Positives = 340/820 (41%), Gaps = 110/820 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            ++ PI    V D   +   Q+    G     SLRI+R+G+ + E A+  L G+ K +W L
Sbjct: 846  SISPITQLLVDDFANEQTPQLYALCGQGNRSSLRILRHGLPVMEMAASALPGVAKAVWCL 905

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S  D  D ++VVSF  E   L + + D +EE    G      +L       N ++QV 
Sbjct: 906  KESFTDTCDKYIVVSF--EDATLVLEIGDTVEEITDSGLLRDHSSLLVALLEDNSMLQVH 963

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 211
                R +  +  +   EWK+P    +    ANA Q++++  GG ++Y E+G   L E   
Sbjct: 964  QNGFRHIRKS--QPVTEWKAPGKKIIERCAANARQLVVSLAGGEVIYFELGVNELMEKGK 1021

Query: 212  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRS 270
              L +EI+ LD+  + +        AVG W D SVR+ SL P+     K  L     P +
Sbjct: 1022 LDLGFEITSLDVGQVPQGRQRFPFLAVGSW-DNSVRVLSLDPNDLFRQKSTLALTSHPHT 1080

Query: 271  VLLCAFEGIS-----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            +     +  S           +L   L +G      ++  T  L D     LGT+P+ L 
Sbjct: 1081 LCFSNLQTESAAGSDHTTQCLFLNIGLHNGVFQQTRMDSITAALADSSARFLGTKPVKLF 1140

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
              + +    + A S R  + Y    +     ++ + + +   F S   P+ LA      +
Sbjct: 1141 CVTIQGKRAILALSSRAWLSYFYQTRRQLMPLSTEMLHYASSFQSEQCPEGLAALTSEGM 1200

Query: 380  TIGTIDDI------QKLHIRSIPLGEHPRRICHQEQSRTFAIC----------------- 416
             I T+D +      QK  +R       PRR+     SR   I                  
Sbjct: 1201 KILTLDHLGDTFNQQKCFLRYT-----PRRMVLHPPSRRLIIVESDYGEANAASKQLFGE 1255

Query: 417  SLKNQS--CAEESE----------------------MHFVRLLDDQTFEFISTYPLDTFE 452
            SL +     +EE E                         VR+ D  T E I+ + L+  E
Sbjct: 1256 SLSDTPVIASEEPEEDEDRQALLYPRVERSHEPGKWASCVRIFDPITCETIACHELEDNE 1315

Query: 453  YGCSILSCSFSD-DSNVYYCVGTA--YVLPEENEPTKGRILVF-IVEDGKLQLIAEKETK 508
            +  SI +C F D    V+  +G+     L   + P  G + V+ +VE  +L L+      
Sbjct: 1316 HTRSITTCVFHDRGGEVFVIIGSVKNLRLHPISSPEGGLLRVYRVVEGSQLVLVHTTPVD 1375

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIV 567
            G  Y++  F G+LL ++ + +++Y     D G R+L  +C +      +  +++ GD I 
Sbjct: 1376 GIPYAMIEFQGRLLVSVGKVLRIY-----DLGKRKLLRKCENRYFTSPMIDLKSAGDRIY 1430

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
              D+ +SI  + YK E+  +   A D   ++M++  +LD D   G +   N+F  R  +E
Sbjct: 1431 ASDVHESIHFVKYKAEDNQLITFADDCVPHFMTSSTLLDYDTIAGGDKFGNVFVTRLPAE 1490

Query: 628  -----------------GATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 670
                             G  +    +LE + ++H+GE +      SLV        G + 
Sbjct: 1491 VSDEIDNPTGNRMLWDTGLLNGAPHKLEQIAQFHVGEVITSVLRTSLV-------PGGME 1543

Query: 671  TVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDA 729
             +++ T+ G IG +      +   F   L+  +R+    + G +H  +RS+      +  
Sbjct: 1544 VILYTTILGRIGALVPFTSRDDVDFYTHLEMYMRQEKAPLCGRDHLSYRSY-----FIPV 1598

Query: 730  KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
            KN  DGDL E F  L   +   I++ ++ +  E+ K++++
Sbjct: 1599 KNVTDGDLCEQFSSLGPDKQKNIAEDLDRTPTEVVKKLQD 1638


>gi|195126264|ref|XP_002007593.1| GI12293 [Drosophila mojavensis]
 gi|193919202|gb|EDW18069.1| GI12293 [Drosophila mojavensis]
          Length = 1227

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 200/873 (22%), Positives = 357/873 (40%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N ++   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGHTESTTNAGADDDVPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S 
Sbjct: 667  SNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSRTFAICSLKN------------------QSCAEESEMHF--- 431
            + PL   PR  + H +  R     +  N                  +S A E E      
Sbjct: 787  AFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNARKEQMAEEMRSAAGEEERELARE 846

Query: 432  ----------------------------VRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
                                        +R LD    + + T PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFTVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E +    +L  F 
Sbjct: 907  VAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSALEFLHRTEIEEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|378730762|gb|EHY57221.1| pre-mRNA-splicing factor rse1 [Exophiala dermatitidis NIH/UT8656]
          Length = 1210

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 201/805 (24%), Positives = 351/805 (43%), Gaps = 92/805 (11%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSS 94
            P++D  V +L  +   Q+ +  GA    S + +++G+ ++E    EL    + +W+ + +
Sbjct: 422  PLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWTTKLT 481

Query: 95   TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
             DD +D ++++SF   T  L +++ + +EE    GF S   TL       + LVQV    
Sbjct: 482  RDDQYDAYIILSF--RTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKG 539

Query: 155  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHA 212
            +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  
Sbjct: 540  IRHIRADKR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERR 597

Query: 213  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 271
            ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 598  EMTGTVTCLSLGDVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 656

Query: 272  LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 325
             + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P  L   S K 
Sbjct: 657  SIMAMADSTSGGTTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKG 716

Query: 326  TTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 383
               V A S RP + Y+  +    + + ++   + ++  F S   P+ +   +   L I +
Sbjct: 717  QNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQNLRIFS 776

Query: 384  IDDIQK-LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR--------- 433
            I+D+ + L   +IPL   PR+         F +    N   A  +    +          
Sbjct: 777  IEDLSRNLLQENIPLPYTPRKFVKHPDQPLFYVIEADNNVLAPATRQKLLNESTAVNGDA 836

Query: 434  -LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSNVY 469
             +L  + F +                      + T  L+  E   SI +  F S D  V+
Sbjct: 837  VILPPEEFGYPKATGHWASCIQVVDPVNTKSVVFTLELEDNECATSITTAPFASQDDEVF 896

Query: 470  YCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VGTA  ++      + G + V+   EDGK L+ I + + +    +L AF G+LLA + 
Sbjct: 897  LIVGTAKDLVVSPRSFSAGFLHVYRFHEDGKELEFIHKTKVEQPPTALLAFQGRLLAGVG 956

Query: 527  QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
              +++Y     D G +++  +C      L + +QT+G  I+V D+ +S++  +YK +E  
Sbjct: 957  PDLRIY-----DLGMKQMLRKCQVTTPNLIVGLQTQGSRIIVSDIQESVTYCVYKFQENK 1011

Query: 587  IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------ERG 635
            +     D  A W +   ++D +   G +   NL+ +R   K SE A ++        ERG
Sbjct: 1012 LIPFCDDVIARWTTCCTMVDYETVAGGDKFGNLWMLRCPQKVSEEADEDNSGVHLLHERG 1071

Query: 636  -------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-L 687
                   RL ++  Y  G+     +  +LV        G    V +    G +G++   +
Sbjct: 1072 YLNGTPNRLSLMIHYFPGDIPTSIQKTNLV-------AGGRDVVFWTGFQGTLGILVPFV 1124

Query: 688  PHEQYLFLEKLQTNLRKV--IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
              E   F + L+  L        + G +H  +RS+    K V     +DGDL E+F  L 
Sbjct: 1125 SREDVDFFQSLEMQLASSNGNPPLLGRDHLIYRSYYAPSKGV-----IDGDLCETFFLLP 1179

Query: 746  RTRMDEISKTMNVSVEELCKRVEEL 770
              +   I+  ++ SV E+ +++ ++
Sbjct: 1180 NDKKLMIAGELDRSVREIERKISDM 1204


>gi|194749950|ref|XP_001957397.1| GF24063 [Drosophila ananassae]
 gi|190624679|gb|EDV40203.1| GF24063 [Drosophila ananassae]
          Length = 1228

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 198/874 (22%), Positives = 359/874 (41%), Gaps = 141/874 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTSAGGVNEDAPAQRS 666

Query: 278  ----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
                G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S
Sbjct: 667  GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMS 726

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  +
Sbjct: 727  SRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQ 786

Query: 394  -SIPLGEHPRR-ICHQEQSRTFAICS--------------------LKNQSCAEESEMHF 431
             + PL   PR  + H +  R     +                    +++ +  EE E+  
Sbjct: 787  VAFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKNARKEQMAEEMRSAAGDEERELAR 846

Query: 432  -----------------------------VRLLDDQTFEFISTYPLDTFE--YGCSILSC 460
                                         +R LD    + +   PL   E     ++L  
Sbjct: 847  EMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFNVPLTQNEAIMSMAMLKF 906

Query: 461  SFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAF 517
            S + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  F
Sbjct: 907  SIAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTEIDEIPGALCGF 966

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 576
             G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+ 
Sbjct: 967  QGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF 1021

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE---- 632
             + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+    
Sbjct: 1022 FIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDED 1080

Query: 633  --------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
                    +RG L       E +  +H+GE +   +  +L+        G    +I+ T+
Sbjct: 1081 PTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATL 1133

Query: 678  NGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
            +G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGD
Sbjct: 1134 SGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGD 1188

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E +L +  ++   I+  M  +  ++CK++E++
Sbjct: 1189 LCEQYLSIDASKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|24654874|ref|NP_728546.1| CG13900, isoform A [Drosophila melanogaster]
 gi|23092721|gb|AAF47416.2| CG13900, isoform A [Drosophila melanogaster]
 gi|60678131|gb|AAX33572.1| LD01809p [Drosophila melanogaster]
 gi|220950356|gb|ACL87721.1| CG13900-PA [synthetic construct]
 gi|289803030|gb|ADD20765.1| FI04459p [Drosophila melanogaster]
          Length = 1227

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 201/873 (23%), Positives = 359/873 (41%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGGLDDDAPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S 
Sbjct: 667  NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + + + PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   +      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|60677959|gb|AAX33486.1| RE01065p [Drosophila melanogaster]
          Length = 1227

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 201/873 (23%), Positives = 359/873 (41%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGGLDDDAPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S 
Sbjct: 667  NNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + + + PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   +      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTDIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|378730761|gb|EHY57220.1| pre-mRNA-splicing factor rse1, variant [Exophiala dermatitidis
           NIH/UT8656]
          Length = 914

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 201/805 (24%), Positives = 351/805 (43%), Gaps = 92/805 (11%)

Query: 36  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIKGMWSLRSS 94
           P++D  V +L  +   Q+ +  GA    S + +++G+ ++E    EL    + +W+ + +
Sbjct: 126 PLLDCKVANLLDEDAPQIYSICGAGARSSFKTLKHGLSVSEIVESELPDKPEAVWTTKLT 185

Query: 95  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
            DD +D ++++SF   T  L +++ + +EE    GF S   TL       + LVQV    
Sbjct: 186 RDDQYDAYIILSF--RTGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDALVQVHPKG 243

Query: 155 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHA 212
           +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  DG L E  +  
Sbjct: 244 IRHIRADKR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDERR 301

Query: 213 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV 271
           ++   ++CL +  + E    S   AVG   D +VRI SL PD  L  K        P ++
Sbjct: 302 EMTGTVTCLSLGDVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSAL 360

Query: 272 LLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN 325
            + A    +      YL   L  G  L  +L+  TGEL+D +   LG +P  L   S K 
Sbjct: 361 SIMAMADSTSGGTTMYLHIGLYSGVYLRTVLDEITGELSDTRTRFLGLRPAKLFRVSVKG 420

Query: 326 TTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGT 383
              V A S RP + Y+  +    + + ++   + ++  F S   P+ +   +   L I +
Sbjct: 421 QNAVMALSSRPWLGYTDTQTNGFMLTPLDYVPLQYVWNFTSEQCPEGMVGIQGQNLRIFS 480

Query: 384 IDDIQK-LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR--------- 433
           I+D+ + L   +IPL   PR+         F +    N   A  +    +          
Sbjct: 481 IEDLSRNLLQENIPLPYTPRKFVKHPDQPLFYVIEADNNVLAPATRQKLLNESTAVNGDA 540

Query: 434 -LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCSF-SDDSNVY 469
            +L  + F +                      + T  L+  E   SI +  F S D  V+
Sbjct: 541 VILPPEEFGYPKATGHWASCIQVVDPVNTKSVVFTLELEDNECATSITTAPFASQDDEVF 600

Query: 470 YCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAIN 526
             VGTA  ++      + G + V+   EDGK L+ I + + +    +L AF G+LLA + 
Sbjct: 601 LIVGTAKDLVVSPRSFSAGFLHVYRFHEDGKELEFIHKTKVEQPPTALLAFQGRLLAGVG 660

Query: 527 QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA 586
             +++Y     D G +++  +C      L + +QT+G  I+V D+ +S++  +YK +E  
Sbjct: 661 PDLRIY-----DLGMKQMLRKCQVTTPNLIVGLQTQGSRIIVSDIQESVTYCVYKFQENK 715

Query: 587 IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------ERG 635
           +     D  A W +   ++D +   G +   NL+ +R   K SE A ++        ERG
Sbjct: 716 LIPFCDDVIARWTTCCTMVDYETVAGGDKFGNLWMLRCPQKVSEEADEDNSGVHLLHERG 775

Query: 636 -------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-L 687
                  RL ++  Y  G+     +  +LV        G    V +    G +G++   +
Sbjct: 776 YLNGTPNRLSLMIHYFPGDIPTSIQKTNLV-------AGGRDVVFWTGFQGTLGILVPFV 828

Query: 688 PHEQYLFLEKLQTNLRKV--IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
             E   F + L+  L        + G +H  +RS+    K V     +DGDL E+F  L 
Sbjct: 829 SREDVDFFQSLEMQLASSNGNPPLLGRDHLIYRSYYAPSKGV-----IDGDLCETFFLLP 883

Query: 746 RTRMDEISKTMNVSVEELCKRVEEL 770
             +   I+  ++ SV E+ +++ ++
Sbjct: 884 NDKKLMIAGELDRSVREIERKISDM 908


>gi|408400551|gb|EKJ79630.1| hypothetical protein FPSE_00190 [Fusarium pseudograminearum CS3096]
          Length = 1212

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 200/813 (24%), Positives = 353/813 (43%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E    + P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + + +    NEW +P   S+  ATANA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGNV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  ID + +  I +SIPL   P+++        F      N +   E     + 
Sbjct: 770  QGQSLRIFNIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     ++L  + F +                       + T  L+  E   S    
Sbjct: 830  DPGVVNGDSKVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIV 889

Query: 461  SFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
            SFS  D+  +  +GT     V P         I  F+    +L+ I + + +    +L A
Sbjct: 890  SFSSQDNESFLVIGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKVEEPPLALLA 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G++L A+   +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++
Sbjct: 950  FQGRVLVAVGTSLRIYDLGMR-QMLRKSQAEVATQ-QIVSL--NTQGSRIIVGDVQQGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK     +     D  A W +   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 YVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               R+ ++  ++  +        SLV       VG    +++  + 
Sbjct: 1066 SGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASLV-------VGGQEVLLWSGIM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ +LR     + G +H  +R +    K V     +DGDL
Sbjct: 1119 GTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGV-----IDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYNLLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|295666353|ref|XP_002793727.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278021|gb|EEH33587.1| pre-mRNA-splicing factor rse1 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1209

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 202/814 (24%), Positives = 362/814 (44%), Gaps = 89/814 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VHLVESVNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K    V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQKAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSL 418
              +   L I +I+ ++  L   +I L   PR+ I H EQ   + I              L
Sbjct: 766  GIQGQNLRIFSIEKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRAKL 825

Query: 419  KNQSCAEESEM---------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILS 459
             N S A   +                H+   ++++D   +   +S   L+  E   S+ +
Sbjct: 826  LNDSDAVNGDATVLPSEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAA 885

Query: 460  CSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
             SFS  D   +  VGT   ++      + G I ++   EDGK L+ I + + +    +L 
Sbjct: 886  VSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALL 945

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             F G+LLA I   +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S+
Sbjct: 946  GFQGRLLAGIGTDVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESV 1001

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 632
            + ++YK +E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++
Sbjct: 1002 TYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADED 1061

Query: 633  ERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
              G               RL +V  ++  +     +   LV        G    +++  +
Sbjct: 1062 GSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGL 1114

Query: 678  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G +G+ I  +  E+  F + L+  L      + G +H  +RS+        AK  +DGD
Sbjct: 1115 QGTVGMLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGD 1169

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1170 LCETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|46125735|ref|XP_387421.1| hypothetical protein FG07245.1 [Gibberella zeae PH-1]
          Length = 1208

 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 201/813 (24%), Positives = 351/813 (43%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E    + P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + + +    NEW +P   S+  ATANA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGNV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKEV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  ID + +  I +SIPL   P+++        F      N +   E     + 
Sbjct: 770  QGQSLRIFNIDRLGETLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     R+L  + F +                       + T  L+  E   S    
Sbjct: 830  DPGVVNGDSRVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVLQTIDLENNEAAVSAAIV 889

Query: 461  SFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
             FS  D+  +  +GT     V P         I  F+    +L+ I + + +    +L A
Sbjct: 890  PFSSQDNESFLVIGTGKDMVVNPRSFSEGYLHIYRFLEGGRELEFIHKTKVEEPPLALLA 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G++L A+   +++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++
Sbjct: 950  FQGRVLVAVGTSLRIYDLGMR-QMLRKSQAEVATQ-QIVSL--NTQGSRIIVGDVQQGVT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
             ++YK     +     D  A W +   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 YVVYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               R+ ++  ++  +        SLV       VG    +++  + 
Sbjct: 1066 SGLHLINARDYLHGTPHRVSLMCHFYTQDIPTSITKASLV-------VGGQEVLLWSGIM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ +LR     + G +H  +R +    K V     +DGDL
Sbjct: 1119 GTIGVFIPFVSREDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGV-----IDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++  L
Sbjct: 1174 CERYNLLPNDKKQMIAGELDRSVREIERKISYL 1206


>gi|427798971|gb|JAA64937.1| Putative damage-specific dna binding complex subunit ddb1, partial
            [Rhipicephalus pulchellus]
          Length = 1259

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 204/847 (24%), Positives = 364/847 (42%), Gaps = 127/847 (14%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L   NL P         +E   +L P +   + DL  +   Q+    G    
Sbjct: 384  TFFFAPRAL--RNLLP---------VEELDSLSPAMGCTIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
              +R++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433  SCIRVLRHGLEVSEMAVSELPGNPNAVWTVKRKADEDYDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEW++P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIRHIRADKR--VNEWRTPGKKAIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E     ++  +I C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPTGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAF---------EGISYLLCALGDG 289
            +  D +VRI SL   + ++   +      P S+ +            +GI YL   L +G
Sbjct: 609  L-ADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGMTEVETTGQGILYLNIGLQNG 667

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
             LL  +L+  TG+L+D +   LG++P+ L     + +    A S R  + Y    +   +
Sbjct: 668  VLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDAALAMSSRSWLSYYYQNRFHLT 727

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQE 408
             ++ + +     F+S   P+ +       L I  ++ +  +  + S  L   PR+     
Sbjct: 728  PLSYETLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSTTLEYTPRKFVVNS 787

Query: 409  QSRTFAICSL------------KNQSCAEE-------------SEM-------------- 429
             S    I               + Q  AEE             +EM              
Sbjct: 788  DSGHLIIVETDHNAYTEKMKQQRKQQMAEEMVEAAGEGEQELAAEMAAAFLSEVLPETVF 847

Query: 430  -----------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYV 477
                         +R+L+    + +    L+  E   S+    F S     Y  VG A  
Sbjct: 848  GSPKAGSGMWASVIRVLNPADSQTLCKVALEQNEAALSVALVKFASQPDEQYVVVGAARE 907

Query: 478  LPEE--NEPTKGRILVFIVE---DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 532
            L  +  +  + G +L + +    + +L+L+     + A  +L  F G+LLA + + ++LY
Sbjct: 908  LSLQPWHARSGGLLLTYRLSHAGETRLELVHATSVEEAPTALCPFQGRLLAGVGKCLRLY 967

Query: 533  KWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 591
                 D G ++L  +C +     A+  +Q+ G+ +VVGD+ +S   L YK +E  +   A
Sbjct: 968  -----DLGRKKLLRKCENKYIPSAIVSIQSMGNRVVVGDVQESFFFLRYKRQENQLVIFA 1022

Query: 592  RDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDE------------ERGRL- 637
             D    W++A  +LD D   GA+   N+  +R  NS   +DE            +RG L 
Sbjct: 1023 DDAVPRWITASCMLDYDTVAGADKFGNVSIIRLPNS--VSDEVDEDPTGIKSLWDRGWLG 1080

Query: 638  ------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHE 690
                  EV+  +H+GE V   +  +L+        G   ++++ T++G IGV+     HE
Sbjct: 1081 GSSQKAEVISNFHIGETVLSLQKATLI-------PGGSESLVYVTLSGTIGVLVPFTAHE 1133

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
             + F + L+ ++R     + G +H  +RS          KN +DGDL E F  L  ++  
Sbjct: 1134 DHDFFQHLEMHMRSENPPLCGRDHLSFRS-----SYFPVKNVIDGDLCEQFNSLDPSKQK 1188

Query: 751  EISKTMN 757
             I++ ++
Sbjct: 1189 SIAEELD 1195


>gi|119473054|ref|XP_001258481.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
 gi|119406633|gb|EAW16584.1| nuclear mRNA splicing factor, putative [Neosartorya fischeri NRRL
            181]
          Length = 1209

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 202/816 (24%), Positives = 353/816 (43%), Gaps = 97/816 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   +L P++D  +V+L      Q+ T SG     S R +++G+ ++E    EL  + 
Sbjct: 413  LVETLNSLNPLIDSKIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVESELPSVP 472

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL       +
Sbjct: 473  SAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLGED 530

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  DG
Sbjct: 531  SLIQVHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADG 588

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 589  TLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQ 647

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG + +
Sbjct: 648  ALTSAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQV 707

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   S K  T V A S RP + YS    K  + + ++   +     F+S    + +   
Sbjct: 708  KLFRVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGI 767

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR 433
            +   L I +I+ +   +   SIPL   PRR+    +   F +    N   +  +    + 
Sbjct: 768  QAQNLRIFSIEKLDNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIE 827

Query: 434  ----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILSCS 461
                      +L  + F +                      IST  L+  E   S+ +  
Sbjct: 828  DSKARNGETNVLPPEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVP 887

Query: 462  FSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNA 516
            FS  D   +  VGTA  +   N P+     + I    EDGK L+ I + + +    +L  
Sbjct: 888  FSSQDDETFLVVGTAKDM-IVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLG 946

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMK 573
            F G+LLA I   +++Y     D G ++L  +C     +++  +   QT+G  I+V D+ +
Sbjct: 947  FQGRLLAGIGSTLRVY-----DLGMKQLLRKC--QAPVVSKTIVGLQTQGSRIIVSDVRE 999

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGAT 630
            S++ ++YK++E  +     D  + W ++  ++D +   G +   NL+ VR   K SE A 
Sbjct: 1000 SVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEEAD 1059

Query: 631  DE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
            ++        ERG       RL+++   +  +         LV        G    +++ 
Sbjct: 1060 EDGSGAHLIHERGYLHGTPNRLDLMIHTYTQDIPTSLHKTQLV-------AGGRDILVWT 1112

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
               G IG++   +  E   F + L+  L      + G +H  +RS+    K V     +D
Sbjct: 1113 GFQGTIGMLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV-----ID 1167

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E +  L       I+  ++ SV E+ +++ ++
Sbjct: 1168 GDLCEMYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|405121632|gb|AFR96400.1| hypothetical protein CNAG_03173 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1276

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 196/769 (25%), Positives = 357/769 (46%), Gaps = 78/769 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQ 83
            +E+LER++N+ P+ D C V  E      +V  SGA +  SLR+VR+G+G+ E  +++ L 
Sbjct: 491  LEILERWMNIAPVKDLCAVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQGLH 550

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
             ++ MWSL  ST  P    L++S  + T  + + L+ E+    I     +++TL      
Sbjct: 551  DVQKMWSLTDSTAVPR---LLLS--TSTSTVLLQLQPEISVIPIVDVIFKSETLAAGILP 605

Query: 144  YNQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
              +L+ QVT   + L S  S  +L  + K   G  +  A   A   ++A  GG+LV   +
Sbjct: 606  GAELLAQVTPRGLSLWSDLSVGQLEAQMKVDKGTEIVCAQVTADWAVVAKKGGNLVVFHV 665

Query: 202  GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEH 261
             D   +      ++ E+S + I+   ++ S   + A   WT  +  +++L  ++      
Sbjct: 666  SDTGFSPEGTIDVKEEVSAVAISNSSDSSSPIIVIAT--WTAKTF-VYTLSQIS----NG 718

Query: 262  LGGEIIPRSVLLCAFEGISY--------LLCALGDG----HLLNFLLNMKTGELTDR--K 307
            + G  IP      + +  S+        LL  L +G    H L+   +   GEL  +  K
Sbjct: 719  VDGLSIPTKSSATSLQLRSHPFYPAGIQLLSGLDNGLLHIHDLDTSDSGDAGELMVKSSK 778

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAA---SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 364
              SLG +P+ L    S +      +   ++R +VI+ S  ++ +S+VN+K +      N+
Sbjct: 779  SASLGLRPLVLHPCESTHGDEKVISVGLTERMSVIFESKGRVEFSSVNIKNIMAATAVNT 838

Query: 365  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC 423
            ++ P     ++   L++  I+ ++KLH+++   G E   ++ + ++ +  A C L  ++ 
Sbjct: 839  SSGPVFALFSRTSGLSLVKINSLKKLHVQTCDTGNESVSKLTYMDEYKAVA-CGLTRRTQ 897

Query: 424  AEES---EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE 480
              +    E +FV++ D  + E +S++ L   E   S+ S   +   ++Y  VGT  + P+
Sbjct: 898  LRDGDVEEENFVQIRDGTSLEPLSSFSLRGRELVTSLRSVFLT--GSIYLAVGTGILPPD 955

Query: 481  ENEPT-----------KGRILVFIVEDGK------LQLIAEKETKGAVYSLNAFNGKLLA 523
            + E +           +GR+L+   ++G       +++ AE  T GAVY+L   +G L  
Sbjct: 956  DGEDSSWDEGNLAVVREGRVLLLEFKEGDAGSGWDIKVKAELATVGAVYALEEIHGFLAV 1015

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHG-------HILALYVQTRGDFIVVGDLMKSIS 576
            A   K+ +++    D    EL+               +L   +      ++VGD M+S+ 
Sbjct: 1016 AAGSKLTIHR---LDHNPVELEETSSWASAYVISSLSVLPPSLMRPEGALIVGDGMRSVI 1072

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEER 634
            +L     +G I +  R+   + ++A+ +L D  D  + ++ + NL T R N         
Sbjct: 1073 VLNVDEGDGMIYDDERNMATHGVTALGLLKDKGDGVVISDAHSNLLTYRLNQ-------- 1124

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 694
             +LE    + L E V RF+ GSLV      ++  IP V+F T  G +G+I  L       
Sbjct: 1125 -KLERAATFGLHEEVTRFQSGSLVPTTTAPEI-IIPDVLFATREGRLGIIGELGTRSSRT 1182

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            L+ LQ N+ K+ KG G +    WR   +     D   F+DGD ++ FLD
Sbjct: 1183 LDDLQRNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAGFVDGDFVQKFLD 1231


>gi|194864680|ref|XP_001971056.1| GG14635 [Drosophila erecta]
 gi|190652839|gb|EDV50082.1| GG14635 [Drosophila erecta]
          Length = 1227

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 201/873 (23%), Positives = 357/873 (40%), Gaps = 140/873 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + +    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPSGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTQGALDDDAPAQRSG 666

Query: 278  ---GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASD 334
               G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S 
Sbjct: 667  SNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMSS 726

Query: 335  RPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR- 393
            R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + 
Sbjct: 727  RTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQV 786

Query: 394  SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SE 428
            + PL   PR  + H +  R           T    S + +  AEE              E
Sbjct: 787  AFPLQYTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELARE 846

Query: 429  M-------------------------HFVRLLDDQTFEFISTYPLDTFE--YGCSILSCS 461
            M                           +R LD    + +   PL   E     ++L  S
Sbjct: 847  MANAFINEVLPEDVFSSPKAGLGLWASQIRCLDAMHGQTMFNVPLTQNEAIMSMAMLKFS 906

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAFN 518
             + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  F 
Sbjct: 907  IAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSSLEFMHRTEIDEIPGALCGFQ 966

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+  
Sbjct: 967  GRLLAGCGRMLRIY-----DFGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVFF 1021

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE----- 632
            + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+     
Sbjct: 1022 IRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDEDP 1080

Query: 633  -------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   +RG L       E +  +H+GE +   +  +L+        G    +I+ T++
Sbjct: 1081 TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYATLS 1133

Query: 679  GVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGDL
Sbjct: 1134 GTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGDL 1188

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 CEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221


>gi|145240731|ref|XP_001393012.1| pre-mRNA-splicing factor rse1 [Aspergillus niger CBS 513.88]
 gi|134077536|emb|CAK96680.1| unnamed protein product [Aspergillus niger]
          Length = 1209

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 203/818 (24%), Positives = 355/818 (43%), Gaps = 97/818 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  VV++      Q+ T SGA    S R +++G+ ++E    EL  
Sbjct: 411  LNLVETINSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQIHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDS 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++
Sbjct: 646  VQALTAAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V   S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKGQTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +  +SIPL   PRR     +   F +    N   A  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLAPSTRAKL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      + T  L+  E   SI +
Sbjct: 826  LEDSKSRGGDETVLPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAA 885

Query: 460  CSF-SDDSNVYYCVGTAYVLPEENEP--TKGRILVF-IVEDGK-LQLIAEKETKGAVYSL 514
              F S D   +  VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L
Sbjct: 886  VPFTSQDDETFLVVGTAKDM-TVNPPGSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDL 571
              F G+L+A I   +++Y     D G ++L  +C     ++   +   QT+G  IVV D+
Sbjct: 945  LGFQGRLVAGIGSLLRIY-----DLGMKQLLRKC--QAPVVPKTIVGLQTQGSRIVVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  + W +A  ++D +   G +   NL+ +R   K SE 
Sbjct: 998  RESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RLE++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL E +  L       I+  ++ SV E+ +++ ++
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|261196131|ref|XP_002624469.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239587602|gb|EEQ70245.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis SLH14081]
 gi|239614558|gb|EEQ91545.1| splicing factor 3B subunit 3 [Ajellomyces dermatitidis ER-3]
 gi|327356791|gb|EGE85648.1| pre-mRNA-splicing factor rse1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1209

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 194/814 (23%), Positives = 356/814 (43%), Gaps = 89/814 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  V +L      Q+ T  G     S R +++G+ ++E    EL  
Sbjct: 411  VNLVESINSLNPLMDCKVANLTDDDAPQIYTICGTGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K    + A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQKAILALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCIEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +++ ++  L   +IPL   PR      +   F +    N   +  +    
Sbjct: 766  GIQGQNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEHPLFYVIEADNNILSPGTRTKL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      IS   L+  E   S+ +
Sbjct: 826  LNDSGAVNGDAMVLPPEEFGYPRGTGHWASCIQIVDPVNSQSVISQIELEENEAAVSVAA 885

Query: 460  CSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
             +FS  D   +  VGT   ++      + G I V+   E+GK L+ I + + +    +L 
Sbjct: 886  VTFSSQDDETFLVVGTGKDMVVNPRSSSAGFIYVYRFQEEGKELEFIHKTKVEQPPMALL 945

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             F G+LLA I   +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S+
Sbjct: 946  GFQGRLLAGIGTDVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESV 1001

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 632
            + ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++
Sbjct: 1002 TYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPEKASEEADED 1061

Query: 633  ERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
              G               RL +V  ++  +     +   LV        G    +++  +
Sbjct: 1062 GSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDVLVWTGL 1114

Query: 678  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G + + I  +  E+  F + L+  L      + G +H  +RS+        AK  +DGD
Sbjct: 1115 QGTVAMLIPFVSREEVDFFQSLEMQLSSQNPPLAGRDHLIYRSY-----YAPAKGTIDGD 1169

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1170 LCETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|121700262|ref|XP_001268396.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
 gi|119396538|gb|EAW06970.1| nuclear mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
          Length = 1209

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 203/818 (24%), Positives = 353/818 (43%), Gaps = 97/818 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  + +L      Q+   SG     + R +++G+ ++E    EL  
Sbjct: 411  LNLVESLNSLNPLIDSKIANLNEDDAPQIYAVSGTGARSTFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRGDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDA 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S +  T V A S RP + Y     K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFRVSVRGQTAVLALSSRPWLGYCDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +    ++ SIPL   PRR+    +   F +    N   +  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQESIPLSYTPRRLLKHPEQPLFYVIGSDNNVLSPATRARL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +            L  + F +                      IST  L+  E   S+ +
Sbjct: 826  IEDSKARNGEADTLPPEEFGYPRATGHWASCIQVVDPVNAKAVISTIELEENEAAVSMAA 885

Query: 460  CSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSL 514
              FS  D   +  VGTA  L   N P+     + I    EDGK L+ I + + +    +L
Sbjct: 886  VPFSSQDDETFLVVGTAKDL-TVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH---HGHILALYVQTRGDFIVVGDL 571
             AF G+L+A I   +++Y     D G ++L  +C        I+ L  QT+G  I+V D+
Sbjct: 945  LAFQGRLVAGIGSILRIY-----DLGMKQLLRKCQAPVVPKTIVGL--QTQGSRIIVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  + WM++  ++D +   G +   NL+ VR   K SE 
Sbjct: 998  RESVTYVVYKYQENVLIPFVDDTVSRWMTSTTMVDYETVAGGDKFGNLWLVRCPKKISEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RLE++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLHGTPNRLELMIHTYTQDIPTSVHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFMSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL E +  L       I+  ++ SV E+ +++ ++
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|325096432|gb|EGC49742.1| pre-mRNA-splicing factor Rse1 [Ajellomyces capsulatus H88]
          Length = 1209

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 200/816 (24%), Positives = 356/816 (43%), Gaps = 93/816 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VNLVESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPS 470

Query: 85   IK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTREDEFDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDT 586

Query: 203  DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K 
Sbjct: 587  DGSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +++ ++  L   +IPL   PR      +   F +   +N   +  +    
Sbjct: 766  GIQGQNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEHPLFYVIEAENNILSPGTR--- 822

Query: 432  VRLLDDQTFEFISTYPLDTFEYG-----------------------------------CS 456
             +LL+D       T PL   E+G                                    S
Sbjct: 823  TKLLNDSDAVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVS 882

Query: 457  ILSCSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            + +  FS  D   +  VGT   ++      T G I ++   E+GK L+ I + + +    
Sbjct: 883  VAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPM 942

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            +L  F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ 
Sbjct: 943  ALLGFQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQ 998

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGA 629
            +S++ ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A
Sbjct: 999  ESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEA 1058

Query: 630  TDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
             ++  G               RL +V  ++  +     +   LV    D  V    T + 
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQ 1115

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            GTV+ +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +D
Sbjct: 1116 GTVSMLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTID 1167

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1168 GDLCETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|195012560|ref|XP_001983703.1| GH16029 [Drosophila grimshawi]
 gi|193897185|gb|EDV96051.1| GH16029 [Drosophila grimshawi]
          Length = 1228

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 198/874 (22%), Positives = 357/874 (40%), Gaps = 141/874 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N ++   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGHTESTTNASGADEDVPAQRS 666

Query: 278  ----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
                G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S
Sbjct: 667  GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMS 726

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  +
Sbjct: 727  SRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQ 786

Query: 394  -SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES----------EMHF----------- 431
             + PL   PR       +    I    + +  EE+          EM             
Sbjct: 787  VAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNERKEQMAEEMRSAAGDEERDLAR 846

Query: 432  -----------------------------VRLLDDQTFEFISTYPLDTFE--YGCSILSC 460
                                         +R LD    + + + PL   E     ++L  
Sbjct: 847  EMANAFINEVLPEDMFSAPKAGLGLWASQIRCLDAMHGQTMFSVPLAQNEAIMAMAMLKF 906

Query: 461  SFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNAF 517
            S + D   Y  VG A  L      ++G  + V+ ++     L+ +   E +    +L  F
Sbjct: 907  SIAADGRYYLAVGIAKDLQLNPRISQGGCIDVYKIDPTCSALEFLHRTEIEEIPGALCGF 966

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSIS 576
             G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+ 
Sbjct: 967  QGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF 1021

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE---- 632
             + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+    
Sbjct: 1022 FIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDED 1080

Query: 633  --------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
                    +RG L       E +  +H+GE +   +  +L+        G    +I+ T+
Sbjct: 1081 PTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYSTL 1133

Query: 678  NGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
            +G +G        E Y F + L+ ++R     + G +H  +RS          KN LDGD
Sbjct: 1134 SGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDGD 1188

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E +L +  ++   I+  M  +  ++CK++E++
Sbjct: 1189 LCEQYLSVDASKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|125977518|ref|XP_001352792.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
 gi|54641542|gb|EAL30292.1| GA12611 [Drosophila pseudoobscura pseudoobscura]
          Length = 1228

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 202/877 (23%), Positives = 357/877 (40%), Gaps = 147/877 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRTLKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + +    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPDGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N +T   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLTPCSMQALPSPAES-LCLVEMGHTESTTSAGALDDDAPPQRS 666

Query: 278  ----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAAS 333
                G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S
Sbjct: 667  GSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMS 726

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR 393
             R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  +
Sbjct: 727  SRSWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQ 786

Query: 394  -SIPLGEHPRR-ICHQEQSRTFAICSLKN------------------QSCAEESEMHFVR 433
             + PL   PR  + H +  R     +  N                  +S A + E    R
Sbjct: 787  VAFPLQFTPRTFVIHPDTGRMLIAETDHNAYTEDTKSARKEQMAEEMRSAAGDEERELAR 846

Query: 434  LLDDQTFEFIS-TYPLDTFE-------------------YGCSILSCSFSD--------- 464
             + +    FI+   P D F                    +G ++ S S +          
Sbjct: 847  EMANA---FINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSVSLTQNEAIMSMAM 903

Query: 465  -------DSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSL 514
                   D   Y  VG A  L      ++G  L ++ ++     L+ +   E      +L
Sbjct: 904  VKFSVAADGRYYLAVGIARDLQLNPRISQGGCLDIYKIDPTCSSLEFMHRTEIDEIPGAL 963

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMK 573
              F G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +
Sbjct: 964  CGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQE 1018

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE- 632
            S+  L Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+ 
Sbjct: 1019 SVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDV 1077

Query: 633  -----------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
                       +RG L       E +  +H+GE +   +  +L+        G    +I+
Sbjct: 1078 DEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIY 1130

Query: 675  GTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
             T+NG +G        E Y F + L+ ++R     + G +H  +RS          KN L
Sbjct: 1131 STLNGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVL 1185

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1186 DGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1222


>gi|225683909|gb|EEH22193.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb03]
          Length = 1209

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 201/814 (24%), Positives = 362/814 (44%), Gaps = 89/814 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VHLVENVNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K    V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQKAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSL 418
              +   L I +I+ ++  L   +I L   PR+ I H EQ   + I              L
Sbjct: 766  GIQGQNLRIFSIEKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKL 825

Query: 419  KNQSCAEESEM---------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILS 459
             N S A   +                H+   ++++D   +   +S   L+  E   S+ +
Sbjct: 826  LNDSDAVNGDATVLPPEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAA 885

Query: 460  CSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
             SFS  D   +  VGT   ++      + G I ++   EDGK L+ I + + +    +L 
Sbjct: 886  VSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALL 945

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             F G+LLA I   +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S+
Sbjct: 946  GFQGRLLAGIGTDVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESV 1001

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 632
            + +++K +E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++
Sbjct: 1002 TYVVFKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADED 1061

Query: 633  ERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
              G               RL +V  ++  +     +   LV        G    +++  +
Sbjct: 1062 GSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGL 1114

Query: 678  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G +G+ I  +  E+  F + L+  L      + G +H  +RS+        AK  +DGD
Sbjct: 1115 QGTVGMLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGD 1169

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1170 LCETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|302831461|ref|XP_002947296.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
 gi|300267703|gb|EFJ51886.1| hypothetical protein VOLCADRAFT_73165 [Volvox carteri f. nagariensis]
          Length = 1221

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 207/851 (24%), Positives = 359/851 (42%), Gaps = 137/851 (16%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            +++   +L PI D  V +L  +   Q+    G     SL ++R G+ + E A   L G  
Sbjct: 396  LIDEMASLMPITDMKVANLLNEEIPQIYALCGHGPRASLSVLRPGLAVTELAVSPLPGAP 455

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W++R +  D FD F+VVSF + T  L  ++ +E++ET   GF     TL       N
Sbjct: 456  TAVWTVRRNATDEFDAFIVVSFANAT--LVFSIGEEVKETNESGFLGTVPTLHTQLLADN 513

Query: 146  QLVQVT----------SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
             ++Q T           G +R +    R   NEWK P   ++  A +N  QV +A  GG 
Sbjct: 514  SMLQATFFDLSEPQVYPGGLRHIKPDRR--INEWKVPGRRNIKAAASNEKQVAIALQGGE 571

Query: 196  LVY--LEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
            +    LE+G G+L E +   L  ++SCL+I P+ E    S   AVG + D +VR+ SL P
Sbjct: 572  VTVFELEVGTGLLVEAEKRDLGEDVSCLEIPPVPEGLVRSSFLAVGTY-DQTVRVLSLDP 630

Query: 253  DLNLITKEHLGGEIIPRSVLLC---------AFEGISYLLCALGDGHLLNFLLNMKTGEL 303
               L          +P S+L+          A EG  +L   L +G L+   ++  +G+L
Sbjct: 631  GQGLKNLSMQALNSVPESILMLYNTGPGTERATEGGLFLHVGLQNGILIRSEVDRISGQL 690

Query: 304  TDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN 363
            TD +   LGT+P  L   + +    + A S RP + Y+   +   S ++ + + +   F 
Sbjct: 691  TDSRTRFLGTKPPKLFAAAVRGNRCMLALSSRPWLGYNDQGRFNLSPLSYEALDYASGFA 750

Query: 364  SAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQS 422
            S   P+      +  L I  ++++    + ++  L   PRR+    +++   I    N +
Sbjct: 751  SDQCPEGFVAVVKSTLRILAVENVGDAFNTQACRLRYTPRRLLIHPETKLLMIAESDNAA 810

Query: 423  C---------------AEES----------------EMHF-------------VRLLDDQ 438
                            AEE                 E  F             +RL+D  
Sbjct: 811  IPLAEREDLQAKLAALAEEEGAPVQGVEFNDELAALEEQFGAPKGQPGQWAGCLRLVDPA 870

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSD-------------DSNVYYCVGTAYVLPEENEPT 485
            T   +    +D  E   +I+S +  D                V  C      +P + E  
Sbjct: 871  TLSTVFVTEVDNNE---AIVSMALVDLVLPAGPGFGGTEKLLVVGCAKGLRYMPTDCE-- 925

Query: 486  KGRILVFIVEDG--KLQLIAEKETKGAVY-SLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
               I V+ + DG  +L+L+ +    G V  +L  F G+LLA +   ++LY     D G +
Sbjct: 926  AAYIRVYRLADGGKRLELVHKTIVDGGVPGALCGFKGRLLAGVGPTLRLY-----DMGKK 980

Query: 543  ELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 599
            +L  +C ++     I+ + VQ  G  I VGD  +S+ ++ YK  + A    A D    ++
Sbjct: 981  KLLRKCEYNRLPHQIMNITVQ--GPRIYVGDAQESVHMMRYKKADNAFYIFADDIAPRYL 1038

Query: 600  SAVEILDDDIYLGAENNFNLFTV----RKNSEGATDEERG---------------RLEVV 640
            + +  LD D  L A + F  F V    R+ S+   D+  G               +LE V
Sbjct: 1039 TTILPLDYDT-LAAGDKFGNFVVLRLPREASQQVEDDPTGGKMAAASGRLNGAPHKLEEV 1097

Query: 641  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQ 699
             ++H+G+ +   +   +         G    +++ TV G IGV+    + E   F   L+
Sbjct: 1098 VKFHVGDTITSLQRAEM-------QAGGQEVLLYSTVMGAIGVLYPFTNREDVDFFGHLE 1150

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +LR+    + G +H  +RS          ++ +DGDL   +  +   +   I++ M+ +
Sbjct: 1151 MHLRQEHPPLCGRDHLSFRS-----AYFPVRSCVDGDLCGQYASIPAKKQQMIAEAMDRT 1205

Query: 760  VEELCKRVEEL 770
              E+ K++E++
Sbjct: 1206 PGEMLKKLEDI 1216


>gi|226293297|gb|EEH48717.1| pre-mRNA-splicing factor rse1 [Paracoccidioides brasiliensis Pb18]
          Length = 1208

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 202/811 (24%), Positives = 360/811 (44%), Gaps = 89/811 (10%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VHLVENVNSLNPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTSKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDT 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + +  + S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDEKREMSGTVTCLSLGEVPKGRARSSFLAVGC-DDSTVRILSLDPDSTLGNKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K    V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQKAVLALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRR-ICHQEQSRTFAI------------CSL 418
              +   L I +I+ ++  L   +I L   PR+ I H EQ   + I              L
Sbjct: 766  GIQGQNLRIFSIEKLENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKL 825

Query: 419  KNQSCAEESEM---------------HF---VRLLDD-QTFEFISTYPLDTFEYGCSILS 459
             N S A   +                H+   ++++D   +   +S   L+  E   S+ +
Sbjct: 826  LNDSDAVNGDATVLPPEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAA 885

Query: 460  CSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
             SFS  D   +  VGT   ++      + G I ++   EDGK L+ I + + +    +L 
Sbjct: 886  VSFSSQDDETFLVVGTGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALL 945

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             F G+LLA I   +++Y   +R    R+ Q+    H   L + +QT+G  I+V D+ +S+
Sbjct: 946  GFQGRLLAGIGTDVRIYDLGMR-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQESV 1001

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE 632
            + ++YK +E  +     D  + W +   ++D +   G +   NL+ +R   K SE A ++
Sbjct: 1002 TYVVYKSQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADED 1061

Query: 633  ERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
              G               RL +V  ++  +     +   LV        G    +++  +
Sbjct: 1062 GSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLV-------TGGRDILVWTGL 1114

Query: 678  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G +G+ I  +  E+  F + L+  L      + G +H  +RS+        AK  +DGD
Sbjct: 1115 QGTVGMLIPFISREEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTIDGD 1169

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            L E++L L   +  +I+  ++ SV E+ +++
Sbjct: 1170 LCETYLLLPNDKKQQIAGELDRSVREIERKI 1200


>gi|115390120|ref|XP_001212565.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
 gi|114194961|gb|EAU36661.1| splicing factor 3B subunit 3 [Aspergillus terreus NIH2624]
          Length = 1217

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 202/810 (24%), Positives = 350/810 (43%), Gaps = 103/810 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L P++D  V +L  +   Q+ T SGA    + R +++G+ ++E    EL  +   +W+ 
Sbjct: 419  SLNPLIDSKVANLSEEDAPQIYTISGAGARSTFRTLKHGLEVSEIVESELPSVPSAVWTT 478

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + +D FD ++++SF + T +L++   + +EE    GF S   TL       + LVQ+ 
Sbjct: 479  KLTREDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLGEDSLVQIH 536

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEV- 209
               +R +    R   NEW +P   S+  A  N  QV +A   G +VY E+  DG L E  
Sbjct: 537  PRGIRHIMVDRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYD 594

Query: 210  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
            +  Q+   ++ L +  + E    S   AVG   D +VRI SL PD  L  K        P
Sbjct: 595  ERRQMSGTVTSLSLGEVPEGRIRSSFLAVGC-DDSTVRILSLDPDSTLENKSVQALTAAP 653

Query: 269  RSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 322
             ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++P+ L   S
Sbjct: 654  SALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKPVKLFQVS 713

Query: 323  SKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
             K  T V A S RP + YS    K  + + ++   +     F+S    + +   +   L 
Sbjct: 714  VKGQTAVLALSSRPWLGYSDIQTKGFMLTPLDYVPLEWGWNFSSEQCLEGMVGIQGQNLR 773

Query: 381  IGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT 439
            I +I+ +   +  +SIPL   PRR     +   F +    N   +  +     RLL+D  
Sbjct: 774  IFSIEKLDNNMLQQSIPLSYTPRRFVKHPEQPLFYVIESDNNVLSPSTR---ARLLEDSK 830

Query: 440  F-----------EF------------------------ISTYPLDTFEYGCSILSCSF-S 463
                        EF                        + T  L+  E   S+ +  F S
Sbjct: 831  SRNGDTTVLPPEEFGYPRATGHWASCIQVVDPLDAKAVVHTVELEDNEAAVSVAAVPFTS 890

Query: 464  DDSNVYYCVGTAYVLPEENEPTKGRILVFIV---EDGK-LQLIAEKETKGAVYSLNAFNG 519
             D   +  VGT   +   N P+     + I    EDG+ L+ I + + +    +L AF G
Sbjct: 891  QDDETFLVVGTVKDM-TVNPPSSAGGFIHIYRFQEDGRELEFIHKTKVEEPPLALLAFQG 949

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSIS 576
            +L   +   +++Y     D G ++L  +C    H++   +   QT+G  IVV D+ +S++
Sbjct: 950  RLAVGLGSLLRIY-----DLGMKQLLRKC--QAHVVPKTIVGLQTQGSRIVVSDVRESVT 1002

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE- 632
             ++YK++E  +     D  + W ++  ++D +   G +   NL+ VR   K SE A ++ 
Sbjct: 1003 YVVYKYQENVLIPFVDDSISRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEQADEDG 1062

Query: 633  -------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                   ERG       RLE++   +  +         LV        G    +++   +
Sbjct: 1063 SGAHLIHERGYLHGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILVWTGFH 1115

Query: 679  GVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IG++   +  E   F + L+  L      + G +H  +RS+    K V     +DGDL
Sbjct: 1116 GTIGMLVPFVSREDVDFFQNLEMQLASQHPPLAGRDHLIYRSYYAPVKGV-----IDGDL 1170

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             E++  L       I+  ++ SV E+ +++
Sbjct: 1171 CETYFLLPNDTKMMIAADLDRSVREIERKI 1200


>gi|119191318|ref|XP_001246265.1| hypothetical protein CIMG_00036 [Coccidioides immitis RS]
          Length = 1072

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 234/454 (51%), Gaps = 31/454 (6%)

Query: 21  KGSYVEVLERYVNLGPIVDFCVVDLERQG----------QGQVVTCSGAYKDGSLRIVRN 70
           +GS+ E+++   N+GPI+DF V+DL  +G          Q ++VT SGA++DGSLR VR+
Sbjct: 361 EGSF-EIIQTLSNIGPILDFTVMDLGNRGETPTHEFSSGQARIVTGSGAFRDGSLRSVRS 419

Query: 71  GIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE-IE 128
           G+G+ +   +  ++ I  +W L +   + F   L++SF+ E+R+   + + E+EE +   
Sbjct: 420 GVGMEDLGVLGAMEHITDLWGLSAFCPEGFCDTLLLSFVDESRVFHFSPDGEVEEKDDFL 479

Query: 129 GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVL 188
           G      T+   +    +++QVT    R+    SR    EW +     +  A++N   ++
Sbjct: 480 GLLLGEPTIHAANLPSRRILQVTEHGARVTDVESRMTLWEWSAVESRKITAASSNDRHLV 539

Query: 189 LATGGGHLVYLEIGDGI-LTEVKHAQLEYEIS--CLDINPIGENPSYSQIAAVGMWTDIS 245
           L  GG  L+  +IGD I ++  K  + + ++S   L  +PI       Q   +       
Sbjct: 540 LMVGGQKLMVFDIGDDIKMSSTKTFEADKQVSGVALTSSPI-------QACILCFPQSAE 592

Query: 246 VRIFSLPDLNLITKEHLG--GEIIPRSVLL-CAF-EGISYLLCALGDGHLLNFLLNMKTG 301
           V I  L  LN+   E LG  G+ +PRSVL+ C F +    L  A+ DG + +F LN+   
Sbjct: 593 VTIIDLTGLNIRHTETLGEPGDAVPRSVLVACMFSDRAPTLFVAMADGSVFSFSLNVANY 652

Query: 302 ELTDRKKVSLGTQPITLRTFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            L+D  K+ LG++    +     +  + +FA  D P++IY+S  +++YS VN  + + +C
Sbjct: 653 SLSDANKLVLGSEAPVFKLLPRADGLYNIFATCDHPSLIYASEDRIVYSAVNSDKATRIC 712

Query: 361 PFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKN 420
            FN+ A+P ++A+A   ++ I  +D  +   I+++ + E  RR  +    R F + +++ 
Sbjct: 713 HFNAEAYPGAIAVATPDDIKIALVDAERTTQIQTLMINETVRRTSYSSTERAFGLGTIQR 772

Query: 421 Q--SCAEESEMHFVRLLDDQTFEFISTYPLDTFE 452
                 EE + HF+ L D+  F  +S + L+  E
Sbjct: 773 TLVQNVEEVKSHFI-LADEIMFRQLSVFDLNPNE 805



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 12/241 (4%)

Query: 543  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA----IEERARDYNANW 598
            E++ E  +      + +   G+ I V DLMKSISL+ Y   EG     ++E AR Y   W
Sbjct: 835  EIEKEASYRTSTAPVDISVTGNIIAVADLMKSISLVEYHAGEGGQPDTLKEVARHYQTLW 894

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
             +A   + ++ +L A+   NL  + +++ G T+++R R++V  E  LGE VNR  H   +
Sbjct: 895  TTAAAPVAENEFLVADAEGNLVVLNRDTTGVTEDDRRRMQVTSELRLGEMVNRI-HPMDL 953

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
               P+S V  IP     TV+G I +   +       L +LQ+ L   +   G +   ++R
Sbjct: 954  QTSPESPV--IPKAFLATVDGSIYLFGLISPSAQDTLMRLQSALADFVASPGEIPFNKYR 1011

Query: 719  SFNNEKKTVDAK-NFLDGDLIESFL----DLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            +F +  +  +    F+DG+LIE FL    D+    +  +     V+V E+   +E L R+
Sbjct: 1012 AFKSSVRQAEEPFRFVDGELIEQFLTFPPDIQEAALARMDGGGRVNVIEIKGMIEGLKRM 1071

Query: 774  H 774
            H
Sbjct: 1072 H 1072


>gi|225560964|gb|EEH09245.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus G186AR]
          Length = 1209

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 200/816 (24%), Positives = 356/816 (43%), Gaps = 93/816 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VNLVESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPS 470

Query: 85   IK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTREDEFDAYIILSFTNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDT 586

Query: 203  DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K 
Sbjct: 587  DGSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQTAVLALSSRPWLGYSHLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +++ ++  L   +IPL   PR      +   F +   +N   +  +    
Sbjct: 766  GIQGQNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTR--- 822

Query: 432  VRLLDDQTFEFISTYPLDTFEYG-----------------------------------CS 456
             +LL+D       T PL   E+G                                    S
Sbjct: 823  TKLLNDSDAVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVS 882

Query: 457  ILSCSFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            + +  FS  D   +  VGT   ++      T G I ++   E+GK L+ I + + +    
Sbjct: 883  VAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTKVEQPPM 942

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            +L  F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ 
Sbjct: 943  ALLGFQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQ 998

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGA 629
            +S++ ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A
Sbjct: 999  ESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEA 1058

Query: 630  TDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
             ++  G               RL +V  ++  +     +   LV    D  V    T + 
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQ 1115

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            GTV+ +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +D
Sbjct: 1116 GTVSMLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTID 1167

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E++L L   +  +I+  ++ SV E+ +++ ++
Sbjct: 1168 GDLCETYLLLPNDKKQQIAGELDRSVREIERKIADM 1203


>gi|367027320|ref|XP_003662944.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
 gi|347010213|gb|AEO57699.1| hypothetical protein MYCTH_2304190 [Myceliophthora thermophila ATCC
            42464]
          Length = 1211

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 205/816 (25%), Positives = 364/816 (44%), Gaps = 98/816 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P+VD  V +L  +   Q+    G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   G-MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 476  AAVWTTKLTKYDEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQMGEE 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  A  N +QV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L I  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSIGKVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P S+ + + E    G++ YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 650  ALTSAPSSLSIMSMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S +N   V A S RP + Y+    K  + + +N  E+ +   FNS    + +    
Sbjct: 710  LFQVSVQNQACVLALSSRPWLGYTDPITKNFVMTPLNYSELEYGWNFNSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCAE 425
               L I TID + +  I +SIPL   P+R+  H EQ   + I S        L+ Q  A+
Sbjct: 770  ANFLRIFTIDKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTIPPELRAQLLAQ 829

Query: 426  ESEMHF-VRLLDDQTFEFISTYPLDTFEYG-CSILSCSFSDDSNVYYCVG--------TA 475
               ++    +L  + F     YP  T  +  C  +     D+  V   +         +A
Sbjct: 830  SGAVNGDATVLPPEDF----GYPRATGRWASCISIVDPLGDEPKVLQRIDLEGNEAAVSA 885

Query: 476  YVLP---EENEP-----------------TKGRILVF-IVEDGK-LQLIAEKETKGAVYS 513
             V+P   +E E                  T+G I V+   EDG+ L+ I + + +    +
Sbjct: 886  AVVPFASQEGESFLVVGTGKDMVLNPRKFTEGYIHVYRFHEDGRELEFIHKTKVEEPPLA 945

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L  F G+LLA I + +++Y   LR    + L+   G     L + +QT+G  I+VGD+ +
Sbjct: 946  LIPFQGRLLAGIGKMLRVYDLGLR----QLLRKAQGEVAPQLIVTLQTQGSRIIVGDVQQ 1001

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATD 631
             ++ ++YK E   +   A D    W +   ++D +   G +   N++ +R  + +   +D
Sbjct: 1002 GVTYVVYKPESNKLLVFADDTINRWTTCTTMVDYESVAGGDKFGNVWILRCPERASQESD 1061

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFG 675
            E    ++++          ++ HG+              LP S       VG    +++ 
Sbjct: 1062 EPGSEIQLL-------HARKYLHGAPNRLDLMVHFYTQDLPTSIVKTNLVVGGQDVLVWS 1114

Query: 676  TVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
             + G +GV I  +  E   F + L++++R     + G +H  +R +      V  K  +D
Sbjct: 1115 GIQGTVGVLIPFVSREDVDFFQSLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVID 1169

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1170 GDLCERFSLLPNDKKQMIAGELDRSVREIERKISDI 1205


>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]
          Length = 1240

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 216/903 (23%), Positives = 382/903 (42%), Gaps = 168/903 (18%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 365  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 412

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 413  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 470

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 471  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 528

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 529  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 588

Query: 239  GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
            G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 589  GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 645

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 646  LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 705

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 706  YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 765

Query: 401  PRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM------ 429
            PR+ + H E +            T A  + + Q  AEE             +EM      
Sbjct: 766  PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLN 825

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                                 +R+++      +    L+  E   S+  C FS+    +Y
Sbjct: 826  ENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWY 885

Query: 471  C-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAIN 526
              VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L  + 
Sbjct: 886  VLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVG 945

Query: 527  QKIQLY----KWMLR---------------------------------DDGTRELQSECG 549
            + +++Y    K +LR                                 D G ++L  +C 
Sbjct: 946  KLLRVYDLGKKKLLRKCENKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKC- 1004

Query: 550  HHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
             + HI A Y   +QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD
Sbjct: 1005 ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLD 1063

Query: 607  DDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEF 648
             D   GA+   N+  VR   N+    DE         +RG L       EV+  YH+GE 
Sbjct: 1064 YDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGET 1123

Query: 649  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIK 707
            V   +  +L+        G   ++++ T++G IG++     HE + F + ++ +LR    
Sbjct: 1124 VLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHP 1176

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++
Sbjct: 1177 PLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKL 1231

Query: 768  EEL 770
            E++
Sbjct: 1232 EDI 1234


>gi|342885857|gb|EGU85809.1| hypothetical protein FOXB_03657 [Fusarium oxysporum Fo5176]
          Length = 1189

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 201/802 (25%), Positives = 351/802 (43%), Gaps = 92/802 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E    + P++D  V +L  +   Q+ T  G     S R++++G+ +NE  + EL GI 
Sbjct: 416  LVESIPAMNPLLDCKVANLTGEDAPQIYTICGNGPRSSFRMLKHGLEVNEIVASELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R V +      NEW +P   S+  ATANA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHVRNGHV---NEWAAPQHRSIVAATANAHQVAVALSSGEIVYFEMDADG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGDVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A +  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIIAMDDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKEV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F+S    + +   
Sbjct: 710  RLFQVTVQGKTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I  ID +    I +SIPL   P+++        F      N +   E     + 
Sbjct: 770  QGQSLRIFNIDRLGDTLIQKSIPLTYTPKKLVKHPDQPLFYTIEADNNTLPPELRAQLLA 829

Query: 433  ---------RLLDDQTFEF-----------------------ISTYPLDTFEYGCSILSC 460
                     R+L  + F +                       + T  L+  E   S    
Sbjct: 830  DPKIVNGDSRVLPPEDFGYPKGTRRWASCINVIDPLSEEGQVVQTIDLENNEAAVSAAIV 889

Query: 461  SFSD-DSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            SFS  D+  +  VGT   ++      ++G + ++  +DG           G   +L AF 
Sbjct: 890  SFSSQDNESFLVVGTGKDMVVNPRSYSEGYLHIYRFQDG-----------GENLTLLAFQ 938

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            G++  A+  ++++Y   +R    R+ Q+E      I++L   T+G  I+VGD+ + ++ +
Sbjct: 939  GRVAVAVGTQLRIYDLGMR-QMLRKSQAEVAAQ-QIVSL--NTQGSRIIVGDVQQGVTYV 994

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG 635
            +YK     +     D  A W +   ++D +   G +   N+F VR   K SE A DEE+ 
Sbjct: 995  VYKPASNKLIPFVDDTIARWTTCTTMVDYESVAGGDKFGNMFIVRCPEKASEEA-DEEQT 1053

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDS------DVGQIPTVIFGTVNGVIGV-IASLP 688
             L ++           + HG+    +P S       VG    +++  + G IGV I  + 
Sbjct: 1054 GLHLIN-------AREYLHGTPHRDIPTSITKTSLVVGGQEILLWSGIMGTIGVFIPFIS 1106

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
             E   F + L+ +LR     + G +H  +R +    K V     +DGDL E +  L   +
Sbjct: 1107 REDADFFQNLEQHLRTEDPPLAGRDHLMYRGYYAPVKGV-----IDGDLCERYNLLPNDK 1161

Query: 749  MDEISKTMNVSVEELCKRVEEL 770
               I+  ++ SV E+ +++ ++
Sbjct: 1162 KLMIAGELDRSVREIERKISDI 1183


>gi|357478269|ref|XP_003609420.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510475|gb|AES91617.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 202/841 (24%), Positives = 366/841 (43%), Gaps = 125/841 (14%)

Query: 28   LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 86
            +++  +L P++D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI  
Sbjct: 407  IDQVESLMPVMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPS 466

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
             +W+++ +  D FD ++VVSF + T +L++   +  +E    GF     +L       + 
Sbjct: 467  AVWTVKKNVMDEFDAYIVVSFTNATLVLSIG--ETADEVSDSGFLDTAPSLAVSLIGDDS 524

Query: 147  LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGI 205
            L+QV    +R +    R   NEW++    ++    +N  QV++A  GG L+Y E+   G 
Sbjct: 525  LMQVHPNGIRHIREDGRT--NEWQTSGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQ 582

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 264
            L EV+  ++  +++CLDI P+ +    S+  AVG + D ++RI SL PD  + T      
Sbjct: 583  LMEVERHEMSGDVACLDIAPVPKGRLRSRFLAVGSY-DKTIRILSLDPDDCMQTLGIQSL 641

Query: 265  EIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
               P S+L    +               +L   L +G L   +++M TG L+D +   LG
Sbjct: 642  SSAPESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLSRTVVDMVTGLLSDTRSRFLG 701

Query: 313  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS-AAFPDSL 371
             +   L     +    +   S RP + Y      L + ++ + + +   F+S   F   +
Sbjct: 702  LKAPKLFPIIVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCFEGVV 761

Query: 372  AIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-------------- 416
            ++A E  L I T++ + +  +   IPL   PR+   Q + +   +               
Sbjct: 762  SVASEA-LRIFTVERLGETFNQNVIPLRYTPRKFVLQPKRKLLVVIESDQGALTAEEREA 820

Query: 417  ----------SLKNQSCAEE---------------SEMHF-------------VRLLDDQ 438
                      + +N++ +E+               S+ H+             +R+LD +
Sbjct: 821  ARKECFEAAHAGENKTGSEDQMENGGEDEDNDDSLSDEHYGYPKSESDKWVSCIRVLDPR 880

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF-IV 494
            T        L   E   SI + +F D +      VGTA  L    +   T G I ++  +
Sbjct: 881  TGNTTCLLELQENEAAFSICTVNFHDKEYGTLLAVGTAKGLQFTPKRSLTAGFIHIYRFL 940

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
            +DG+ L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  +C +   
Sbjct: 941  DDGRSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKSF 995

Query: 554  ILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              ++  +    D I VG + +S     Y+ +E  +   A D    W+++   +D D   G
Sbjct: 996  PSSIVSIHAYRDRIYVGGIQESFHYCKYRRDENQLYIFADDSVPRWLTSSYHIDFDTMAG 1055

Query: 613  AENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRH 654
            A+   N+F  R                  K  +G  +    ++E + ++H+G+ +   + 
Sbjct: 1056 ADKFGNIFFARLPQDVSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGDVITSLQK 1115

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
             SLV        G    +++GTV G +G + A    +   F   L+ ++R+    + G +
Sbjct: 1116 ASLV-------PGGGECIVYGTVMGSVGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRD 1168

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 769
            H  +RS          K+ +DGDL E F    +DL R   DE+ +T      E+ K++EE
Sbjct: 1169 HMAYRS-----AYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG----EILKKLEE 1219

Query: 770  L 770
            +
Sbjct: 1220 V 1220


>gi|391867503|gb|EIT76749.1| splicing factor 3b, subunit 3 [Aspergillus oryzae 3.042]
          Length = 1034

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 205/838 (24%), Positives = 362/838 (43%), Gaps = 108/838 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++D  V +L  +   Q+ T SG     +
Sbjct: 227  YFRPRSAENLNL-----------VETINSLNPLIDSKVANLSEEDAPQIYTISGTGARST 275

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + +  D FD ++++SF + T +L++   + +E
Sbjct: 276  FRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVE 333

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+Q+    +R + +  R   NEW +P   S+  A  N
Sbjct: 334  EVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMADRR--VNEWPAPQHRSIVAAATN 391

Query: 184  ASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 392  ERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 450

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ + +    S      YL   L  G  L  
Sbjct: 451  DDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGTTLYLHIGLYSGVYLRT 510

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG++P+ L   S K  T V A S RP + YS    K  + + ++
Sbjct: 511  VLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLD 570

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   +  +SI L   PRR     +  
Sbjct: 571  YVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQP 630

Query: 412  TFAICSLKNQSCAEESEMHFVR----------LLDDQTFEF------------------- 442
             F +    N   +  +    +           +L  + F +                   
Sbjct: 631  LFYVIESDNNVLSPSTRAKLLEDSKARTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHA 690

Query: 443  ---ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVE 495
               +ST  L+  E   S+ +  F S D   +  VGTA  +   N P+   G I ++   E
Sbjct: 691  KAVVSTIELEENEAAVSVAAVPFTSQDDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQE 749

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--- 551
            DG+ L+ I + + +    +L  F G+L+A I   +++Y     D G ++L  +C      
Sbjct: 750  DGRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIY-----DLGMKQLLRKCNAQVVP 804

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
              I+ L  QT+G  IVV D+ +S++ ++YK++E  +     D  + W ++  ++D +   
Sbjct: 805  KTIVGL--QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTA 862

Query: 612  GAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFR 653
            G +   N++ +R   K SE A ++        ERG       RLE++   +  +      
Sbjct: 863  GGDKFGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLH 922

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGL 712
               LV        G    +++   +G IG++   +  E   F + L+  L      + G 
Sbjct: 923  KTQLV-------AGGRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGR 975

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +H  +RS+    K V     +DGDL E++  L       I+  ++ SV E+ +++ ++
Sbjct: 976  DHLIYRSYYAPVKGV-----IDGDLCETYFLLPNDTKMMIAAELDRSVREIERKISDM 1028


>gi|340959394|gb|EGS20575.1| putative pre-mRNA splicing protein [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1213

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 191/813 (23%), Positives = 351/813 (43%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P+V   V +L  +   Q+    G     S R++++G+ ++E  + EL G  
Sbjct: 417  LVESIDSMNPLVGCKVANLTGEDAPQIYAICGNGARSSFRMLKHGLEVSEIVASELPGTP 476

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 477  SAVWTTKLTKYDEYDAYIVLSFTNATLVLSIG--ETVEEVSDSGFLTTVPTLAVQQMGEE 534

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+Q+    +R +        NEW +P   S+  AT N +QV++A   G +VY E+  DG
Sbjct: 535  GLIQIHPKGIRHIVQGRV---NEWPAPQHRSIVAATTNENQVVIALSSGEIVYFEMDADG 591

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  Q+   ++ L +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 592  SLAEYDEKKQMSGTVTSLSLGKVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQ 650

Query: 263  GGEIIPRSVLLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P S+L+ + E  +     YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 651  ALTAAPSSLLIMSMEDSTGGTTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPTK 710

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   + +N T V A S RP + Y++   +  + + ++  E+ +   FNS    + +    
Sbjct: 711  LFQVTVQNQTCVLALSSRPWLGYTAPITRNFVMTPLSYTELGYTWSFNSEQCQEGMVGIH 770

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEE-------- 426
               L I TI+ + +  I +S PL   P+R+    +   F +    N +   E        
Sbjct: 771  ANYLRIFTIEKLGQTMIQKSCPLTYTPKRLVKHPEQPYFYVIEADNNTLPPELRAQLLEQ 830

Query: 427  --------------------------SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSC 460
                                      S +  V  + ++    +    L+  E   S    
Sbjct: 831  SGAVNGDATVLPPEDFGYPKARGRWASCIEIVDPVSEEQPRVLKRIELEGNEAAVSAAVV 890

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 516
             F S D   +  VGT   ++      T+G I V+  ++DG+ L+ I +   +    +   
Sbjct: 891  PFASQDGESFLIVGTGKDMVLNPRASTEGAIHVYRFIDDGRDLEFIHKTIIEEPPLAFCP 950

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G+LLA I + +++Y   L+    R+ Q+E       L + + TR + IVVGD+   ++
Sbjct: 951  FQGRLLAGIGKMLRIYDLGLK-QLLRKAQAEVSPQ---LIVSLDTRHNRIVVGDVQHGMT 1006

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER-- 634
             ++YK +   +   A D  A W +   ++D +   G +   NL+ VR     + + +   
Sbjct: 1007 YVVYKPDSNKLIPFADDTIARWTTCTTMVDYESVAGGDKFGNLWIVRCPERASLESDEPG 1066

Query: 635  ----------------GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                             RL+++  ++  +        +LV       VG    +++  + 
Sbjct: 1067 SEVQLLHARPYLHGAPNRLDLMAHFYPQDLPTSICKTNLV-------VGGQDVLVWSGIQ 1119

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +GV I  +  E   F + L++++R     + G +H  +R +      V  K  +DGDL
Sbjct: 1120 GTVGVLIPFVTREDADFFQNLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVIDGDL 1174

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1175 CERFTLLPNDKKQMIAGELDRSVREIERKISDI 1207


>gi|307109500|gb|EFN57738.1| hypothetical protein CHLNCDRAFT_56079 [Chlorella variabilis]
          Length = 1144

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 205/823 (24%), Positives = 361/823 (43%), Gaps = 119/823 (14%)

Query: 23   SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI------NE 76
            S +E L+R  +L PI+D  V +L  +   Q+    G     +LR++R G+ +      +E
Sbjct: 361  SNLEALDRMDSLAPILDMKVANLAGEEIPQIYAACGRGSRSTLRVLRPGLAVTGKRAAHE 420

Query: 77   QASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 135
             A   L G    +W+++ S  D FD ++VVSF + T +L++   + +EE    GF     
Sbjct: 421  MAVSPLPGNPTAVWTIKRSVGDEFDAYIVVSFSNATLVLSIG--ETVEEVNDSGFNGNVP 478

Query: 136  TLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
            TL       + ++QV    +R +    R   NEW++P   ++  AT N  QV +A GGG 
Sbjct: 479  TLQTQLLADDSMLQVYPNGLRHIRPDRR--INEWRAPGRKTIVKATTNERQVAIALGGGE 536

Query: 196  LVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            ++Y E+   G+L E +  ++  +++CLD+ P+ E  +     AVGM+ D + R+ SL PD
Sbjct: 537  VIYFELNPQGMLVESEKREMGGDVACLDVAPVPEGRTRCAFLAVGMY-DGAARVLSLQPD 595

Query: 254  --LNLITKEHLGGEIIPRSVLLC-------------AFEGISYLLCALGDGHLLNFLLNM 298
              L +++ + +G    P SVLL              A  G  +L   L +G LL   ++ 
Sbjct: 596  STLKVLSTQAVGA--TPESVLLLDSPLMGKDGTEEGAGSGALFLQVGLVNGVLLRTEVDR 653

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL--LYSNVNLKEV 356
             TG+L+D +   LGT+P  L  F++      F A  R T+   + ++L   ++  +L+  
Sbjct: 654  VTGQLSDTRTRFLGTKPPKL--FAAA-VPEGFVAVARNTLRVITLERLGEFFNQQSLR-- 708

Query: 357  SHMCPFNSAAFPD----SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRT 412
                P      PD    ++A A    + +   +D+Q+            RR   + + + 
Sbjct: 709  LRYTPRKFVIHPDLKVLAIAEADHAAIPLAQREDLQQ------------RRDGMEAEQQG 756

Query: 413  FAIC------SLKNQSCAEESE-----------MHFVRLLDDQTFEFISTYPLDTFEYGC 455
             A         +  ++ A E +              VR++D  + +      ++  E   
Sbjct: 757  GATAAAAAGPEMDEEAAAREDQWGAPKGEPGQWASCVRIVDPVSLQTTHCIEMEDNEAAL 816

Query: 456  SILSCSFSD--DSNVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGA 510
            S+    F    +      VGTA  L   P+E +     +  F+ +  +++L+ +   +G 
Sbjct: 817  SVCLVEFDSHPEHGTLLAVGTAQGLKFYPKECQNGFVHLYRFLDDGKRIELLHKTAVEGV 876

Query: 511  VYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFI 566
              ++ AF G+LL  ++  ++LY    K MLR    R L +       I  L+V   G  I
Sbjct: 877  PGAMAAFKGRLLVGVDAVLRLYDMGKKRMLRKCEYRRLPT------RIATLHVS--GSRI 928

Query: 567  VVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
             VGD  +S   + YK  +      A D     ++A   LD D   GA+   N+F  R   
Sbjct: 929  YVGDGQESTFFMRYKKGDNQFYIFADDIVPRHVTAALHLDYDTLAGADRFGNVFVSRLPQ 988

Query: 627  E-----------GATDEERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            E           G    E G       +L  +  +H+GE V   +   L         G 
Sbjct: 989  EVSAQVEDDPTGGKYATETGLLGGAPNKLRTINSFHVGETVTALQRAVL-------QPGG 1041

Query: 669  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               +++GT+NG IGV+      E   F + L+ ++R+    + G +H  +RSF       
Sbjct: 1042 RELIVYGTINGAIGVLYPFTSKEDCDFFQHLEMHMRQEHPPLLGRDHLAYRSF-----YF 1096

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              K+ +DGDL E +  L+  +   +++ ++ S  E+ K++E++
Sbjct: 1097 PVKDVVDGDLCEQYPQLAADKARGVAEELDRSPGEVLKKLEDI 1139


>gi|357478323|ref|XP_003609447.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355510502|gb|AES91644.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 1225

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 204/837 (24%), Positives = 360/837 (43%), Gaps = 127/837 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L  I+D  V +L  +   Q+ T  G     SLRI+R G+ ++E A  +L GI   +W++
Sbjct: 412  SLMSIMDMKVSNLFEEETPQIFTLCGRGPRSSLRIMRTGLAVSEMAVSKLPGIPSAVWTV 471

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D FD+++VVSF + T +L++   + +EE    GF     +L       + ++QV 
Sbjct: 472  KKNVMDEFDSYIVVSFTNATLVLSIG--ETVEEVSNSGFLDTAPSLAVSLIGDDSIMQVH 529

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +    R   NEW++    ++    +N  QV++A  GG LVY E+   G L EV+
Sbjct: 530  PNGIRHIREDGRT--NEWQTSGKRTIAKVGSNRLQVVIALNGGELVYFEVDVTGQLMEVE 587

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
              ++  +++CLDI P+ +    S+  AVG + D ++RI SL PD  + T         P 
Sbjct: 588  KHEMSGDVACLDIAPVPKGRLRSRFLAVGSY-DNTIRILSLDPDDCMQTLSIQSLSSAPE 646

Query: 270  SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
            S+L    +               +L   L  G L   +++  TG L+D +   LG +   
Sbjct: 647  SLLFLEVQASVGGEDGADHPASLFLSAGLQSGVLSRTVVDTVTGLLSDARSRFLGLKAPK 706

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
            L          +   S RP + Y      L + ++ + + +   F+S    + +      
Sbjct: 707  LFPIILGRKCAMLCLSSRPWLGYIHQGHFLLTPLSYETLEYAASFSSDQCLEGVVSVSGE 766

Query: 378  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF--------AICSLKNQSCAEE-- 426
             L I T++ + +  +   IPL   PR++  Q + +          A+ + + ++  +E  
Sbjct: 767  ALRIFTVERLGETFNQTVIPLRYTPRKLVLQPKRKLLVVIESDQGALTAKEREAARKECF 826

Query: 427  -----------------------------SEMHF-------------VRLLDDQTFEFIS 444
                                         S+ H+             +R+LD +T     
Sbjct: 827  EAAQTGENATGSEDQMENDGEDEDQGDSLSDEHYGYPKSESDKWVSCIRVLDPRTGNTTC 886

Query: 445  TYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK 498
               L   E   SI + +F D +      VGTA  L  +  P +   + FI     ++DG+
Sbjct: 887  LLELQENEAAFSICTVNFHDKEYGTLLAVGTAKGL--QFTPKRSLTVGFIHIYRFLDDGR 944

Query: 499  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
             L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  +C +    +++
Sbjct: 945  SLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKRRLLRKCENKSFPISI 999

Query: 558  Y-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
              +    D I VGD+ +S     Y+ +E  +   A D    W++A   +D D   GA+  
Sbjct: 1000 VSIHAYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKF 1059

Query: 617  FNLFTVR-----------KNSEGATDEERGRL-------EVVGEYHLGEFVNRFRHGSLV 658
             N+F  R             + G    E+G+L       E + ++H+G+ +   +  +LV
Sbjct: 1060 GNIFFARLPQDVSDEVEEDPTSGKIKWEQGKLNGALNKVEEIVQFHVGDVITSLQKAALV 1119

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                    G    +++GTV G +G + A    +   F   L+ ++R+    + G +H  +
Sbjct: 1120 -------PGGGECIVYGTVMGCVGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAY 1172

Query: 718  RSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            RS          K+ LDGDL E F    +DL R   DE+ +T      E+ K++EEL
Sbjct: 1173 RS-----AYFPVKDVLDGDLCEQFPTLPMDLQRKIADELDRTPG----EILKKLEEL 1220


>gi|195376606|ref|XP_002047087.1| GJ13230 [Drosophila virilis]
 gi|194154245|gb|EDW69429.1| GJ13230 [Drosophila virilis]
          Length = 1229

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 197/875 (22%), Positives = 358/875 (40%), Gaps = 142/875 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALKNLVL-----------VDELPSFAPIITSQVADLANEDTPQLYVLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + S  R   NEWK+P   S+    
Sbjct: 491  VEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKR--VNEWKAPGKKSITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++   G  LVY E+   G L E  + +++  EI C+ +  + E    S   AVG
Sbjct: 549  VNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFE---------------------- 277
            +  D +VRI SL   N ++   +     P    LC  E                      
Sbjct: 609  L-ADNTVRILSLDPNNCLSPCSMQALPSPAES-LCLVEMGHTESTTNAGGADDDVPAQRS 666

Query: 278  -----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 332
                 G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     +    V A 
Sbjct: 667  GGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAM 726

Query: 333  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 392
            S R  + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  
Sbjct: 727  SSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFN 786

Query: 393  R-SIPLGEHPRR-ICHQEQSRTFAICS--------------------LKNQSCAEESEMH 430
            + + PL   PR  + H +  R     +                    +++ +  EE E+ 
Sbjct: 787  QVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEDTKNTRKEQMAEEMRSAAGDEERELA 846

Query: 431  F-----------------------------VRLLDDQTFEFISTYPLDTFE--YGCSILS 459
                                          +R LD    + + + PL   E     ++L 
Sbjct: 847  REMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFSVPLTQNEAIMSMTLLK 906

Query: 460  CSFSDDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVED--GKLQLIAEKETKGAVYSLNA 516
             S + D   Y  VG A  L      ++G  + ++ ++     L+ +   E      +L  
Sbjct: 907  FSVAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSALEFLHRTEIDEIPGALCG 966

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSI 575
            F G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+ +S+
Sbjct: 967  FQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESV 1021

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE--- 632
              + Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD+   
Sbjct: 1022 FFIRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTDDVDE 1080

Query: 633  ---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
                     +RG L       E +  +H+GE +   +  +L+        G    +I+ T
Sbjct: 1081 DPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEALIYAT 1133

Query: 677  VNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G +G        E Y F + L+ ++R     + G +H  +RS          KN LDG
Sbjct: 1134 LSGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS-----SYYPVKNVLDG 1188

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E +L +   +   I+  M  +  ++CK++E++
Sbjct: 1189 DLCEQYLSIDAVKQKSIAGDMFRTPNQICKKLEDI 1223


>gi|390357128|ref|XP_001198237.2| PREDICTED: splicing factor 3B subunit 3-like [Strongylocentrotus
           purpuratus]
          Length = 949

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 199/864 (23%), Positives = 377/864 (43%), Gaps = 132/864 (15%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L           E +++  +L PI+   + DL  +   Q+    G    
Sbjct: 116 TFFFAPRTLRNL-----------EEVDQLESLSPILSCQIADLASEDTPQLYVACGRGPR 164

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            S+R++R+G+ ++E A  EL G    +W+++  +DD +D +++VSF++ T +L++   + 
Sbjct: 165 SSMRVLRHGLEVSEMAVSELPGNPNAVWTVKKKSDDEYDAYIIVSFVNATLVLSIG--ET 222

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL       + L+Q+    +R + +  R   NEWK+P   S+    
Sbjct: 223 VEEVTDSGFLGTTPTLSSSLIGDDALLQIYPDGIRHIRADKR--VNEWKTPGKKSIVKCA 280

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG +VY E+   G L E  +  ++  ++ C+ +  +      ++  AVG
Sbjct: 281 VNQRQVVIALTGGEMVYFEMDPTGQLNEYTERKEMNADVKCMSLATVPSGEQRARFLAVG 340

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE----------------GISYL 282
           +  D +VR+ SL   + +  + L  + +P     LC  E                G  +L
Sbjct: 341 L-DDNTVRVISLDQSDCL--QPLSMQALPAPAEALCIIEMGGTEAREETGERGSSGGLFL 397

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  TG+L+D +   LG++P+ L   + + +  V A S R  + Y  
Sbjct: 398 NIGLQNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRINMQGSEAVLAMSSRSWLSYWY 457

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F S   P+ +       L I  ++ +  +  + S  L   P
Sbjct: 458 QSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSTQLKYTP 517

Query: 402 RRIC-HQEQSRTFAICSLKN-----------QSCAEE-------------SEM------- 429
           R+   H E +    I +  N           Q  AEE             +EM       
Sbjct: 518 RKFAVHLENNNIVVIETDHNTYTDSTKAQRKQQMAEEMVEAAGEEEKELAAEMAEAFLQE 577

Query: 430 ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYY 470
                               +RLL+    + +    L+  E   S+    F++ +   + 
Sbjct: 578 ELPESTFSSPKAGSGMWASTIRLLNPVQGQTLDMVELEQNEAAFSLALVKFANREDETHV 637

Query: 471 CVGTAY-VLPEENEPTKGRILVFIV--EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
            VGTA  V       + G I  +++  E  KL+ + +        S+ AF G++L  I +
Sbjct: 638 LVGTAKDVTLSPRTCSGGAIHTYLLTEEGKKLEFLHKTLVDDVPSSIAAFQGRVLIGIGR 697

Query: 528 KIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEG 585
            +++Y     D G ++L  +C  + HI      + T G+ +++ D+ +S+  L YK +E 
Sbjct: 698 LLRIY-----DLGKKKLLRKC-ENKHIPNFITNILTTGNRVIISDVQESLHFLKYKRQEN 751

Query: 586 AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ER 634
            +   A D N  W++A  +LD D  + A+   N+  +R   +     DE         +R
Sbjct: 752 QMVIFADDSNPRWITATCLLDHDTVMCADKFGNITVLRLPTSVNDNLDEDPTGVKALWDR 811

Query: 635 GRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL 687
           G L       +VV  + +GE V   +  +L+        G   +V++ T++G IGV+   
Sbjct: 812 GLLNGASQKTDVVSSFFIGETVLSLQKATLI-------PGGSESVVYTTLSGAIGVLVPF 864

Query: 688 -PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSR 746
             HE + F + L+ ++R     + G +H  +RS+         KN +DGDL E +  +  
Sbjct: 865 TAHEDHDFFQHLEMHMRSEYAPLCGRDHLSYRSY-----YYPVKNVIDGDLCEQYNSMEL 919

Query: 747 TRMDEISKTMNVSVEELCKRVEEL 770
           ++   +++ ++ +  E+ K++E++
Sbjct: 920 SKQRTVAEELDRNPSEVSKKLEDI 943


>gi|327309050|ref|XP_003239216.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
 gi|326459472|gb|EGD84925.1| pre-mRNA splicing factor rse1 [Trichophyton rubrum CBS 118892]
          Length = 1209

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 209/834 (25%), Positives = 364/834 (43%), Gaps = 100/834 (11%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + ++  +   Q+ T  G     S
Sbjct: 402  YFRPRPAENLNL-----------VESIASLNPLMAASIANITEEDAPQIYTLCGTGARSS 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + S +D FD ++V+SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT+N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATSN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S R  + YS    K    + +N
Sbjct: 686  VLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSRSWLGYSDVQTKSFTLTPLN 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L    IPL   PR      +  
Sbjct: 746  YVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYP 805

Query: 412  TFAICSLKNQ--SCAEESEM--------------------------HF---VRLLDD-QT 439
             F +    N   S A ++++                          H+   ++++D   T
Sbjct: 806  LFYVIGSDNNILSPATKAKLLSESTTVNGDSAELPPEGFGYPRGTNHWASSIQVVDPIHT 865

Query: 440  FEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVED 496
               +S+  L+  E   SI + SF S +   +  VGT   ++      T G I ++   E+
Sbjct: 866  KSVLSSLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQEE 925

Query: 497  GK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHI 554
            GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C       
Sbjct: 926  GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQITPR 980

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G +
Sbjct: 981  VIVGLQTQGSRIIVSDVQESVTYVVYKYQENALISFADDIIPRWTTCTTMVDYETVAGGD 1040

Query: 615  NNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
               N++ +R   K SE A ++  G   +    +L    NR    SLV+     D   IPT
Sbjct: 1041 KFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQD---IPT 1094

Query: 672  VIFGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
             I  T              + G +G+ +  +  +   F + L+  L      + G +H  
Sbjct: 1095 SIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLI 1154

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++ ++
Sbjct: 1155 YRGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKISDM 1203


>gi|164656549|ref|XP_001729402.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
 gi|159103293|gb|EDP42188.1| hypothetical protein MGL_3437 [Malassezia globosa CBS 7966]
          Length = 1207

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 195/805 (24%), Positives = 356/805 (44%), Gaps = 97/805 (12%)

Query: 34   LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR 92
            L P++D  V +       Q+    G     S + +R+G+ ++E  S +L G+ + +WS +
Sbjct: 419  LDPLLDAKVSNPLHSDVPQIYAACGRGARSSFKRLRHGLEVSEVVSSDLPGVPEAVWSTK 478

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
              + D +D ++V+SF++ T +L++   + +EE E  GF +  +TL       + L+QV  
Sbjct: 479  LRSSDQYDGYIVLSFVNGTLVLSIG--ETIEEVEDSGFLTTERTLAVQQLGTDALLQVHP 536

Query: 153  GSVRLVSSTSRELRNEWKSPP-----GYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 206
              +R + S  +   NEW +P         +  AT N  QV+LA     +VY E+  DG L
Sbjct: 537  RGIRHILSNKQV--NEWTTPSCQDGSPTQIVAATTNERQVVLALDSQEIVYFELDMDGQL 594

Query: 207  TEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGG 264
             E +  + +E +I  L I+   E    +   A+    D +VRI SL PD  L        
Sbjct: 595  NEFQERRDIEADIVALSISACPEGSQRTPYVAIAC-ADQTVRIVSLDPDSTLAPMSLQAL 653

Query: 265  EIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
               P S+ +C     S        ++   L +G  +  +L+  TG+LTD +   LG +P+
Sbjct: 654  TAPPSSISVCEMLDASLDRHHLTMFVCIGLANGVYIRTVLDPSTGQLTDTRTRFLGGRPV 713

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
             L        T + A S R  + Y+ +  L ++ + L+ ++H+  F++   PD L   + 
Sbjct: 714  RLVRTQVHGDTAMMALSTRSWLAYTLHSHLHFTPLMLEALTHVSTFHTELCPDGLLGIEG 773

Query: 377  GELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAI----------CSLKNQSCA 424
              L I T+  +  +L + S+ L   PR++  H +Q+  F +            + +Q+  
Sbjct: 774  NALRILTVPRLGSELKMDSLRLTYTPRKLAVHPQQASLFYVIESDHRVVPPTDVVSQART 833

Query: 425  EESEMHF-------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VYY 470
                + F             +R++D  T +  + Y L+  E   S+    F+   N ++ 
Sbjct: 834  AWDPVQFGHVRASAGHWASCLRVVDGTTMQTCAEYALEKDEAALSMALVPFAACGNELFL 893

Query: 471  CVGTAYVLPEENEPTKGRILVF----IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAI 525
             VG+A  L   + P   R        + ++G  L L+ + E      +L AF+G+LLA  
Sbjct: 894  VVGSA--LGVTHAPLTWRAAFLSTYRLTDNGCGLALVHKTEVDHVPLALRAFHGRLLAGT 951

Query: 526  NQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
               ++++     D GT++L  +C        +++L VQ  G  ++VGD+ +S+   +YK 
Sbjct: 952  GPYVRIF-----DMGTKKLLRKCQSRPFPSKVVSLQVQ--GYRVIVGDMQESVHYSVYKP 1004

Query: 583  EEGAIEERARDYNANW-MSAVEILDDDIYLGAENNFNLFTVRKNSEG--ATDE------- 632
                +   A D    W  SA+ +LD D  +  +   N+F +R +S    + DE       
Sbjct: 1005 ATNTLVAFADDIMPRWTTSALLMLDYDTVMAGDKFGNVFVLRIDSSASLSADEDPTGLML 1064

Query: 633  --ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 683
              ER        R +++  YH+G+ +      SLV        G  P V++  VNG IG 
Sbjct: 1065 QNERSYLMGAAHRAQLLAHYHVGDIITSLSMESLV-------PGGRPVVLYTCVNGTIGA 1117

Query: 684  IAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            +   +  E       L+ ++R+    + G +H  +R      K V     +D DL E + 
Sbjct: 1118 LVPFISREDVRLFTTLEMHMRQENLSLTGRDHLAYRGHYTPVKAV-----VDADLCELYT 1172

Query: 743  DLSRTRMDEISKTMNVSVEELCKRV 767
             L   + + I+  ++ +  ++ K++
Sbjct: 1173 ALPHEKQESIADELDRTPADIAKKL 1197


>gi|238487250|ref|XP_002374863.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
 gi|220699742|gb|EED56081.1| nuclear mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
          Length = 1210

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 208/843 (24%), Positives = 363/843 (43%), Gaps = 109/843 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++D  V +L  +   Q+ T SG     +
Sbjct: 402  YFRPRSAENLNL-----------VETINSLNPLIDSKVANLSEEDAPQIYTISGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + +  D FD ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+Q+    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ + +    S      YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGTTLYLHIGLYSGVYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG++P+ L   S K  T V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   +  +SI L   PRR     +  
Sbjct: 746  YVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQP 805

Query: 412  TFAICSLKNQSCAEESEMHFVR----------LLDDQTFEF------------------- 442
             F +    N   +  +    +           +L  + F +                   
Sbjct: 806  LFYVIESDNNVLSPSTRAKLLEDSKARTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHA 865

Query: 443  ---ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVE 495
               +ST  L+  E   S+ +  F S D   +  VGTA  +   N P+   G I ++   E
Sbjct: 866  KAVVSTIELEENEAAVSVAAVPFTSQDDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQE 924

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--- 551
            DG+ L+ I + + +    +L  F G+L+A I   +++Y     D G ++L  +C      
Sbjct: 925  DGRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIY-----DLGMKQLLRKCNAQVVP 979

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
              I+ L  QT+G  IVV D+ +S++ ++YK++E  +     D  + W ++  ++D +   
Sbjct: 980  KTIVGL--QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTA 1037

Query: 612  GAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFR 653
            G +   N++ +R   K SE A ++        ERG       RLE++   +  +      
Sbjct: 1038 GGDKFGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLH 1097

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGL 712
               LV        G    +++   +G IG++   +  E   F + L+  L      + G 
Sbjct: 1098 KTQLV-------AGGRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGR 1150

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE-LT 771
            +H  +RS+    K V     +DGDL E++  L       I+  ++ SV E+ +++    T
Sbjct: 1151 DHLIYRSYYAPVKGV-----IDGDLCETYFLLPNDTKMMIAAELDRSVREIERKISVCFT 1205

Query: 772  RLH 774
            R H
Sbjct: 1206 RYH 1208


>gi|317143715|ref|XP_001819645.2| pre-mRNA-splicing factor rse1 [Aspergillus oryzae RIB40]
          Length = 1209

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 213/838 (25%), Positives = 366/838 (43%), Gaps = 108/838 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++D  V +L  +   Q+ T SG     +
Sbjct: 402  YFRPRSAENLNL-----------VETINSLNPLIDSKVANLSEEDAPQIYTISGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + +  D FD ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+Q+    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ + +    S      YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGTALYLHIGLYSGVYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG++P+ L   S K  T V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQS 410
               +     F+S    + +   +   L I +I+ +   +  +SI L   PRR   H EQ 
Sbjct: 746  YVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQP 805

Query: 411  RTFAICS----LKNQSCAEESEMHFVRLLDDQTF---EF--------------------- 442
              + I S    L   + A+  E    R  D+      EF                     
Sbjct: 806  LFYVIESDNNVLSPSTRAKLLEDSKARTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHA 865

Query: 443  ---ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVE 495
               +ST  L+  E   S+ +  F S D   +  VGTA  +   N P+   G I ++   E
Sbjct: 866  KAVVSTIELEENEAAVSVAAVPFTSQDDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQE 924

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--- 551
            DG+ L+ I + + +    +L  F G+L+A I   +++Y     D G ++L  +C      
Sbjct: 925  DGRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIY-----DLGMKQLLRKCNAQVVP 979

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
              I+ L  QT+G  IVV D+ +S++ ++YK++E  +     D  + W ++  ++D +   
Sbjct: 980  KTIVGL--QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTA 1037

Query: 612  GAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFR 653
            G +   N++ +R   K SE A ++        ERG       RLE++   +  +      
Sbjct: 1038 GGDKFGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLH 1097

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGL 712
               LV        G    +++   +G IG++   +  E   F + L+  L      + G 
Sbjct: 1098 KTQLV-------AGGRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGR 1150

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +H  +RS+    K V     +DGDL E++  L       I+  ++ SV E+ +++ ++
Sbjct: 1151 DHLIYRSYYAPVKGV-----IDGDLCETYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|392869416|gb|EJB11761.1| pre-mRNA-splicing factor rse1 [Coccidioides immitis RS]
          Length = 1209

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 206/836 (24%), Positives = 360/836 (43%), Gaps = 104/836 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + +L      Q  T SG     +
Sbjct: 402  YFRPRPAENLNL-----------VESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + + +D +D ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  ++   ++CL +  +      S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L   +IPL   PR      +  
Sbjct: 746  YVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQP 805

Query: 412  TFAICSLKNQSCAEESEMHF----------VRLLDDQTFEF------------------- 442
             F +    N   +  ++             V  L  + F +                   
Sbjct: 806  LFYVIEADNNILSPSTKAKLLQDSKAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINS 865

Query: 443  ---ISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IV 494
               IS   L+  E   S+ +  FS  D   +  VGT     V P  +  + G I ++   
Sbjct: 866  KAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQ 923

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
            EDGK L+ I + + +   ++L AF G+LLA I + +++Y     D G ++L  +C     
Sbjct: 924  EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVV 978

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              L + +QT+G  I+V D+ +S++ ++YK++E  +   A D  A W +   ++D +   G
Sbjct: 979  PRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAG 1038

Query: 613  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
             +   NL+ +R   K SE A ++  G   +    +L    NR    SL++     D   I
Sbjct: 1039 GDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNRL---SLMVHFYPQD---I 1092

Query: 670  PTVIFGT--------------VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            PT I  T              + G +G++   +  E   F + L+  L      + G +H
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDH 1152

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +RS+        AK  +DGDL E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1153 LIYRSY-----YAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|384490247|gb|EIE81469.1| hypothetical protein RO3G_06174 [Rhizopus delemar RA 99-880]
          Length = 1197

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 202/848 (23%), Positives = 364/848 (42%), Gaps = 120/848 (14%)

Query: 11   LIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRN 70
            L+    +P    S V+ LE   ++ P+++  V++L  +   ++    G     + RI+  
Sbjct: 376  LVYFKPRPLKNLSLVDELE---SMAPLMESKVLNLADEETPRIYAICGRGAQSTFRILNQ 432

Query: 71   GIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
            G+   E A  EL G    +W+ +   DD +  ++VVSF + T +L++   + +EE    G
Sbjct: 433  GVEAAELAVSELPGNPSAVWTTKLRADDQYHAYIVVSFANATLVLSIG--ETVEEVTDTG 490

Query: 130  FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLL 189
            F +   TL       + LVQV    +R + +  R   NEW++P G ++  A  N+ Q+ +
Sbjct: 491  FLTNAPTLAVQQIGEDALVQVHPHGIRHIRADRR--VNEWRAPQGQTIVEAATNSRQIAI 548

Query: 190  ATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
            A   G +VY E+ + G L E  +H Q+   I+ L +  + E    ++  AVG   D +VR
Sbjct: 549  ALSNGEIVYFEMDNMGQLNEHQEHRQMSAYITTLALGEVPEGRVRARYIAVGC-EDQTVR 607

Query: 248  IFSL-PD--LNLITKEHLGGEIIPRSVLLCAFE----------GISYLLCALGDGHLLNF 294
            I SL PD  L  I+ + L G  +P S  LC  E          G  YL   L +G  L  
Sbjct: 608  ILSLDPDSCLEPISMQALQG--VPSS--LCIIEMMDTGIEQGHGTQYLNIGLSNGIFLRT 663

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
            +L+  TG+L+D +   +G + + L   S +    V A S +P V Y+   +L  + ++ +
Sbjct: 664  ILDTITGQLSDTRARFIGAKSVKLFRISIQGHPAVLALSTKPWVSYTFQNRLYLTPLSYE 723

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTF 413
             + H   F +   P+ +       L I T++ +  +  + SIPL   PR+      +RTF
Sbjct: 724  MLEHGSAFVTEQCPEGVVAVAGNTLRIFTVEKLGNIFNQVSIPLKYTPRKFALHAPTRTF 783

Query: 414  AIC---------SLKNQSCAEESEMHF---------------------------VRLLDD 437
             +          S K +   E+    F                           +RL++ 
Sbjct: 784  VVIESDHATFSPSEKAKGIIEKENEGFEIDDDITNLDPLQFGHVRNAAGRWASCIRLIEP 843

Query: 438  QTFEFISTYPLDTFEYGCSILSCSF------SDDSNVYYCVGTAY-VLPEENEPTKGRIL 490
                 + T  L+  E   S+    F      ++ S  +  VGT   V       T G + 
Sbjct: 844  FEGRTLETIELEDNEAAFSVAMVQFRQNPHATNSSEQFVIVGTGQNVNLSPRSCTSGYLH 903

Query: 491  VFIVEDG-----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGT 541
            V+ V  G     +L  I +       Y++ AF G+LL    + +++Y    K MLR   T
Sbjct: 904  VYRVVQGEQGQLRLHFIHKTPIDDVPYAMLAFQGRLLVGAGKSLRIYDIGKKKMLRKCET 963

Query: 542  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            + + + C     I++L+  T+G  ++  D+ +S+  +IYKH +  +   A D    WM+ 
Sbjct: 964  KSIPN-C-----IVSLH--TQGHRVIATDVQESVHYVIYKHADNRLVVFADDTIPRWMTG 1015

Query: 602  VEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEY 643
              ++D +   G +   N F  R                   + +G       +++ + EY
Sbjct: 1016 STMVDYETVAGGDKFGNFFVSRLPGSISREVDEDTTGNRIYHEKGYLQGAPNKIDSLCEY 1075

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNL 702
              G+ +      +L+        G    V+  +  G I + +  L  E   F + L+ ++
Sbjct: 1076 FTGDIITSLHKTTLLS-------GGREVVLTTSFLGAISIYVPFLSKEDVEFFQMLEMHM 1128

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
            R     + G +H  +RS+      +  K+ +DGDL E F  L+  +   I++ ++ SV +
Sbjct: 1129 RAEAPPLAGRDHLLYRSY-----YIPVKSVIDGDLCEQFNTLAAEKKRMIAEELDRSVAD 1183

Query: 763  LCKRVEEL 770
            + K++E++
Sbjct: 1184 VQKKIEDM 1191


>gi|119173562|ref|XP_001239205.1| hypothetical protein CIMG_10227 [Coccidioides immitis RS]
          Length = 1208

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 208/840 (24%), Positives = 360/840 (42%), Gaps = 104/840 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + +L      Q  T SG     +
Sbjct: 402  YFRPRPAENLNL-----------VESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + + +D +D ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  ++   ++CL +  +      S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L   +IPL   PR      +  
Sbjct: 746  YVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQP 805

Query: 412  TFAICSLKNQSCAEESEMHF----------VRLLDDQTFEF------------------- 442
             F +    N   +  ++             V  L  + F +                   
Sbjct: 806  LFYVIEADNNILSPSTKAKLLQDSKAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINS 865

Query: 443  ---ISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IV 494
               IS   L+  E   S+ +  FS  D   +  VGT     V P  +  + G I ++   
Sbjct: 866  KAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQ 923

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
            EDGK L+ I + + +   ++L AF G+LLA I + +++Y     D G ++L  +C     
Sbjct: 924  EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVV 978

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              L + +QT+G  I+V D+ +S++ ++YK++E  +   A D  A W +   ++D +   G
Sbjct: 979  PRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAG 1038

Query: 613  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
             +   NL+ +R   K SE A ++  G   +    +L    NR    SL++     D   I
Sbjct: 1039 GDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNRL---SLMVHFYPQD---I 1092

Query: 670  PTVIFGT--------------VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            PT I  T              + G +G++   +  E   F + L+  L      + G +H
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDH 1152

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
              +RS+        AK  +DGDL E++  L   +   I+  ++ SV E+ +++     LH
Sbjct: 1153 LIYRSY-----YAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKISVSPLLH 1207


>gi|389638952|ref|XP_003717109.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
 gi|148887431|sp|Q52E49.2|RSE1_MAGO7 RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|351642928|gb|EHA50790.1| pre-mRNA-splicing factor RSE1 [Magnaporthe oryzae 70-15]
          Length = 1216

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 211/829 (25%), Positives = 357/829 (43%), Gaps = 84/829 (10%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            P + +    +P    + VE ++   ++ P++D  V +L  +   Q+ T SG     + R+
Sbjct: 400  PYEPVYFYPRPTENLALVESID---SMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRM 456

Query: 68   VRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            +++G+ +NE  + +L G    +W+ +   DD +D ++V+SF + T +L++   + +EE  
Sbjct: 457  LKHGLEVNEIVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIG--ETVEEVS 514

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              GF S   TL       + LVQV    +R + +    + NEW SP   S+  A  N  Q
Sbjct: 515  DTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHIRNG---VVNEWSSPQHRSIVAAATNERQ 571

Query: 187  VLLATGGGHLVYLEIG-DGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDI 244
            V +A   G +VY E+  DG L E    +  +  ++ L +  + E    S   AVG   D 
Sbjct: 572  VAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDC 630

Query: 245  SVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLN 297
            +VRI SL P+  L +K        P ++ + + E  S      YL   L  G  L  +L+
Sbjct: 631  TVRILSLDPESTLESKSVQALTAAPSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLD 690

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKE 355
              TGELTD ++  LG + + L   S +  T V A S R  + +S    K    + +N +E
Sbjct: 691  EVTGELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEE 750

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFA 414
            +     F S    + +       L I  I+ +    I +SIPL   PR++      R F 
Sbjct: 751  LEWGWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFY 810

Query: 415  ICSLKNQSCAEESEMHFV----------RLLDDQTFEF---------------------- 442
                 N + A E     +          R+L    F +                      
Sbjct: 811  TIEADNNTLAPELREQLMAAPTAVNGDARVLPPDEFGYPRGNGRWASCISVVDPLGDGEE 870

Query: 443  -----ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 494
                 +    LD  E   S+   SF S D   +  VGT   ++      T+G I V+   
Sbjct: 871  LEPGVVQRIDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFS 930

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
            EDG+ L+ I + + +    +L  F G+L+A I + +++Y   LR    R+ Q+E      
Sbjct: 931  EDGRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ-- 987

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
             L + + T+G  I+VGD+   +  + YK E   +   A D  A W +   ++D D   GA
Sbjct: 988  -LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGA 1046

Query: 614  ENNFNLFTVR--KNSEGATDEERGRLEVV-GEYHLGEFVNRFRHGSLV--MRLPDS---- 664
            +   NL+ +R  + +   +DE    + +V    +L    NR    + V    +P S    
Sbjct: 1047 DKFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKT 1106

Query: 665  --DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               VG    +++G   G IGV I  +  E   F + L+ +LR     + G +H  +R   
Sbjct: 1107 NLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGC- 1165

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                 V  K  +DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1166 ----YVPVKGVIDGDLCERYTMLPNDKKQMIAGELDRSVREIERKISDI 1210


>gi|213405251|ref|XP_002173397.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
 gi|212001444|gb|EEB07104.1| U2 snRNP-associated protein Sap130 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1166

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 188/786 (23%), Positives = 355/786 (45%), Gaps = 70/786 (8%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + +L+   +L P+ D  V         Q+ T  G +K+ SLR+++ G+   E    EL G
Sbjct: 406  ISLLDEIPSLFPLTDAIVTRTSTDANSQLYTLCGRHKEASLRLLKRGVSATEVVLSELPG 465

Query: 85   IK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
                +W+++   +DP+D ++V+SF + T +L++   + +EE    G  S   TL      
Sbjct: 466  APIAIWTVKQKLNDPYDKYMVLSFTNGTLVLSIG--ETVEEVLDSGLLSSVSTLNVRQLG 523

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
             + +VQ+ S  +R +S+ ++E+  EWK+P    +  +  N  Q++++     L Y E+ D
Sbjct: 524  RSSVVQIHSKGIRCISA-NKEV-TEWKTPADTVITNSAINEQQIVVSLSNDELAYFEMDD 581

Query: 204  --GILTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 260
              G L E +  +L    ++ L + P+ +    S    +    D +VRI SL     +   
Sbjct: 582  EYGQLNEYQERKLLTSPVTALALGPVPQGSKRSNFLCLAS-EDSTVRIVSLDPYTTLENL 640

Query: 261  HLGGEIIPRSVL------LCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
             +     P S L      +  +E + YL   L +G  L  ++++ +G+L D +   LG +
Sbjct: 641  SVQALSAPASSLCMVNMEVTGYETL-YLHIGLSNGVYLRTVVDVTSGQLIDTRTRFLGPR 699

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
            PI L     +    V A ++R  + YS+ + L  S +    + +   F S   P+ +   
Sbjct: 700  PIRLSPIIVRGKQSVLAIANRSYLSYSNEQTLQVSPLLYSPLEYADSFASHQCPEGIVGI 759

Query: 375  KEGELTIGTI----DDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEM 429
             +  L I T+    DD+++      PL   P+R+  H E    + + S ++   +    +
Sbjct: 760  HQNILKIFTVEATHDDLKQ---DVFPLSCTPKRVIKHPELDILYILQSERHCPNSTNEWI 816

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPE--ENEPTKG 487
              + + D    + I      TF      L  +F    N  + V ++ +  +  +   + G
Sbjct: 817  TVLSIFDMNEKKMIEGL---TFNEASFDLCYAFFRSRNEGFLVCSSAINYDISKQSCSNG 873

Query: 488  RILVFIVEDGKLQL--IAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGT 541
             + V+ + DG L L  I+E ET      L  F+G+L+A +   +++Y    K +LR    
Sbjct: 874  VLRVYSLNDGGLSLKCISETETDSFARVLKPFHGRLIAGVGPFLRVYDLGNKKLLRKSEV 933

Query: 542  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            R + +            +QT+G  I+V D   S   +++K E+      A D  A W +A
Sbjct: 934  RAVPN--------FITTIQTQGYRIIVTDAQHSAFFVVFKPEDNRYIVFADDCVARWATA 985

Query: 602  VEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
              ++D D  +G +   NL+ +R  ++     DEE    +++   H   F++   H   +M
Sbjct: 986  TAMVDYDTVVGGDKFSNLWLLRCPESVSQLADEENSGSKLL---HEKPFLHSSPHKLDLM 1042

Query: 660  RLPDSDVGQIPT--------------VIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRK 704
                + V  IPT              +++  + G IGV++   + E   F ++L++ LR 
Sbjct: 1043 --AHTFVNDIPTSIQKVQLVEGARDVIMWTGLLGTIGVLSPFVNREDVRFFQQLESLLRA 1100

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
                + G +H  +RS+      V  K  +DGDL E + +L R + + I+  ++ +V E+C
Sbjct: 1101 EDLSIVGRDHLAYRSY-----YVPVKCVVDGDLCEQYYNLPRDKQESIANELDRTVIEVC 1155

Query: 765  KRVEEL 770
            K++E+L
Sbjct: 1156 KKIEDL 1161


>gi|83767504|dbj|BAE57643.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1270

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 215/842 (25%), Positives = 368/842 (43%), Gaps = 109/842 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++D  V +L  +   Q+ T SG     +
Sbjct: 402  YFRPRSAENLNL-----------VETINSLNPLIDSKVANLSEEDAPQIYTISGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + +  D FD ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVDSELPSVPSAVWTTKLTRADEFDAYIILSFANGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+Q+    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQIHPRGIRHIMADRRV--NEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDADGTLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ + +    S      YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTAAPSALNIMSMSDSSSGGTALYLHIGLYSGVYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG++P+ L   S K  T V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGSKPVKLFQVSVKGQTAVLALSSRPWLGYSDIQTKGFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQS 410
               +     F+S    + +   +   L I +I+ +   +  +SI L   PRR   H EQ 
Sbjct: 746  YVPLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKLDNNMLQQSISLAYTPRRFLKHPEQP 805

Query: 411  RTFAICS----LKNQSCAEESEMHFVRLLDDQTF---EF--------------------- 442
              + I S    L   + A+  E    R  D+      EF                     
Sbjct: 806  LFYVIESDNNVLSPSTRAKLLEDSKARTGDETVLPPEEFGYPRGSGHWASCIQVVDPVHA 865

Query: 443  ---ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVE 495
               +ST  L+  E   S+ +  F S D   +  VGTA  +   N P+   G I ++   E
Sbjct: 866  KAVVSTIELEENEAAVSVAAVPFTSQDDETFLVVGTAKDM-NVNPPSSAGGYIHIYRFQE 924

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--- 551
            DG+ L+ I + + +    +L  F G+L+A I   +++Y     D G ++L  +C      
Sbjct: 925  DGRELEFIHKTKVEEPPLALLGFQGRLVAGIGPMLRIY-----DLGMKQLLRKCNAQVVP 979

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
              I+ L  QT+G  IVV D+ +S++ ++YK++E  +     D  + W ++  ++D +   
Sbjct: 980  KTIVGL--QTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDSVSRWTTSTTMVDYETTA 1037

Query: 612  GAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFR 653
            G +   N++ +R   K SE A ++        ERG       RLE++   +  +      
Sbjct: 1038 GGDKFGNIWMLRCPKKISEQADEDGSGAHLIHERGYLHGTPNRLELMIHVYTQDIPTTLH 1097

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGL 712
               LV        G    +++   +G IG++   +  E   F + L+  L      + G 
Sbjct: 1098 KTQLV-------AGGRDILVWSGFHGTIGMLVPFVSREDVDFFQNLEMQLAAQNPPLAGR 1150

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE-ELT 771
            +H  +RS+    K V     +DGDL E++  L       I+  ++ SV E+ +++   +T
Sbjct: 1151 DHLIYRSYYAPVKGV-----IDGDLCETYFLLPNDTKMMIAAELDRSVREIERKISLRVT 1205

Query: 772  RL 773
            R+
Sbjct: 1206 RM 1207


>gi|312370905|gb|EFR19207.1| hypothetical protein AND_22901 [Anopheles darlingi]
          Length = 1287

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 208/872 (23%), Positives = 363/872 (41%), Gaps = 151/872 (17%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+QL  L +  D   SY           PI+   V DL  +   Q+    G    
Sbjct: 457  TFFFAPRQLKNLVMVDDIP-SY----------APILGCQVADLANEDTPQLYLACGRGPR 505

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             S+R++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   D 
Sbjct: 506  SSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVNATLVLSIG--DT 563

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF          DA    LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 564  VEEVTDSGFL----VPLGDDA----LVQVYPDGIRHIRADKR--VNEWKAPGKKTIMKCA 613

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 614  VNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGSVPSGEQRSWFLAVG 673

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE--------------------- 277
            +  D +VRI SL   + ++   +  + +P +   LC  E                     
Sbjct: 674  L-ADNTVRIISLDPSDCLSPRSM--QALPSAAESLCIVEMGTVETAANDDDDDDDAPLKT 730

Query: 278  -GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 336
             G  YL   L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S R 
Sbjct: 731  SGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIQMQGSEAVLAMSSRS 790

Query: 337  TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SI 395
             + Y    +   + ++ + + +   F+S    + +       L I  ++ +  +  + S 
Sbjct: 791  WLSYYYQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQISF 850

Query: 396  PLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE-------------- 441
            PL   P+R     ++    I    + +  EE++    R + D+  E              
Sbjct: 851  PLEYTPKRFAIHAETGKLIISETDHNAYTEETKTVRKRQMADEMREAAGDDEQELANEMA 910

Query: 442  --FIS-TYPLDTF---------------------------------EYGCSILSCSFSDD 465
              FI+   P D F                                 E   S+    F+ D
Sbjct: 911  DAFINEVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVLSLALVRFAVD 970

Query: 466  SNVYYCVGTAYVLPEENEPTKGR---ILVFIVED--GKLQLIAEKETKGAVYSLNAFNGK 520
               Y   G A  L  +  P  G    I V+ V++   +L+ +   E   A  +L AF G+
Sbjct: 971  QKWYVVAGVAKDL--QINPKIGNGGFIDVYRVDNQTNELEHVHRTEIDDAPGALCAFQGR 1028

Query: 521  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLL 578
            LLA I + +++Y     D G ++L  +C  + HI    + +Q  G  + V D+ +S+  L
Sbjct: 1029 LLAGIGKVLRMY-----DLGKKKLLRKC-ENKHIPNQIVNIQGMGQRVYVSDVQESVYCL 1082

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------ 632
             YK  E  +   A D +  W+++  +LD D  +   + F    V +     +D+      
Sbjct: 1083 KYKRPENQLIIFADDTHPRWVTSATLLDYDT-VATGDKFGNIAVLRLPHSVSDDVDEDPT 1141

Query: 633  ------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                  +RG L       E +  +HLGE V   +  +L+        G   ++I+ T++G
Sbjct: 1142 GNKALWDRGLLNGASQKAENICTFHLGEIVMSLQKATLI-------PGGSESLIYATMSG 1194

Query: 680  VIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             +G +      E Y F + L+ ++R     + G +H  +RS+         KN +DGDL 
Sbjct: 1195 TVGALVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSY-----YYPVKNVMDGDLC 1249

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1250 EQFTSLDPAKQKSIASDLGRTPSEVAKKLEDI 1281


>gi|154277742|ref|XP_001539706.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
 gi|150413291|gb|EDN08674.1| hypothetical protein HCAG_05173 [Ajellomyces capsulatus NAm1]
          Length = 1233

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 200/813 (24%), Positives = 353/813 (43%), Gaps = 93/813 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            V ++E   +L P++D  + +L      Q+ T  G     S R +++G+ + E    EL  
Sbjct: 411  VNLVESIDSLNPLMDCKIANLTDDDAPQIYTICGTGARSSFRTLKHGLEVAEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTREDEFDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG- 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAATTNERQVAIALSSGEIVYFEMDT 586

Query: 203  DGILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E    + +   ++CL +  +    + S   AVG   D +VRI SL P+  L  K 
Sbjct: 587  DGSLAEYDEKRAMSGTVTCLSLGEVPRGRARSSFLAVGC-DDSTVRILSLDPESTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    +      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 646  VQALTSAPSALSIMAMSDSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S K  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  PVKLFQVSVKEQTVVLALSSRPWLGYSHLQTKAFMLTPLDYVSLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +++ ++  L   +IPL   PR      +   F +   +N   +  +    
Sbjct: 766  GIQGQNLRIFSLEKLENNLLQETIPLQYTPRHFIKHPEYPLFYVIEAENNILSPGTR--- 822

Query: 432  VRLLDDQTFEFISTYPLDTFEYG-----------------------------------CS 456
             +LL+D       T PL   E+G                                    S
Sbjct: 823  TKLLNDSDTVNGDTTPLPPEEFGYPRGTGHWASCIQIVDPINSKRVISQIELEENEAAVS 882

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            + +  F S D   +  VGT   ++      T G I ++   E+GK L+ I +   +    
Sbjct: 883  VAAVPFSSQDDETFLVVGTGKDMVVNPRSCTAGFIHIYRFQEEGKELEFIHKTMVEQPPM 942

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            +L  F G+LLA I   +++Y   ++    R+ Q+    H   L + +QT+G  I+V D+ 
Sbjct: 943  ALLGFQGRLLAGIGTDLRIYDLGMK-QMLRKCQASVVPH---LVVGLQTQGSRIIVSDVQ 998

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGA 629
            +S++ ++YK++E  +     D  + W +   ++D +   G +   NL+ +R   K SE A
Sbjct: 999  ESLTYVVYKYQENRLIPFVDDVISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEA 1058

Query: 630  TDEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
             ++  G               RL +V  ++  +     +   LV    D  V    T + 
Sbjct: 1059 DEDGSGAHLIHERQYLQGAPNRLNLVAHFYPQDLPTSIQKAQLVTGGRDILVW---TGLQ 1115

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            GTV+ +I  I+    E+  F + L+  L      + G +H  +RS+        AK  +D
Sbjct: 1116 GTVSMLIPFIS---REEVDFFQSLEMQLAAQNPPLAGRDHLIYRSY-----YAPAKGTID 1167

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            GDL E++L L   +  +I+  ++ SV E+ +++
Sbjct: 1168 GDLCETYLLLPNDKKQQIAGELDRSVREIERKI 1200


>gi|326483043|gb|EGE07053.1| pre-mRNA-splicing factor rse1 [Trichophyton equinum CBS 127.97]
          Length = 1209

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 209/834 (25%), Positives = 362/834 (43%), Gaps = 100/834 (11%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + ++  +   Q+ T  G     S
Sbjct: 402  YFRPRPAENLNL-----------VESIASLNPLMAASITNITEEDAPQIYTLCGTGARSS 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + S +D FD ++V+SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S R  + YS    K    + +N
Sbjct: 686  VLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSRSWLGYSDVQTKSFTLTPLN 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L    IPL   PR      +  
Sbjct: 746  YVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYP 805

Query: 412  TFAICSLKNQ--SCAEESEM--------------------------HF---VRLLDD-QT 439
             F +    N   S A ++++                          H+   ++++D   T
Sbjct: 806  LFYVIGSDNNILSPATKAKLLSESTAVNGDSAELPPEDFGYPRGTNHWASSIQVVDPIHT 865

Query: 440  FEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVED 496
               +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   E+
Sbjct: 866  KSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQEE 925

Query: 497  GK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHI 554
            GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C       
Sbjct: 926  GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQITPR 980

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G +
Sbjct: 981  VIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGD 1040

Query: 615  NNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
               N++ +R   K SE A ++  G   +    +L    NR    SLV+     D   IPT
Sbjct: 1041 KFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQD---IPT 1094

Query: 672  VIFGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
             I  T              + G +G+ +  +  +   F + L+  L      + G +H  
Sbjct: 1095 SIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLI 1154

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++ ++
Sbjct: 1155 YRGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKISDM 1203


>gi|440473070|gb|ELQ41892.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae Y34]
          Length = 1229

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 211/826 (25%), Positives = 355/826 (42%), Gaps = 84/826 (10%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            P + +    +P    + VE ++   ++ P++D  V +L  +   Q+ T SG     + R+
Sbjct: 400  PYEPVYFYPRPTENLALVESID---SMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRM 456

Query: 68   VRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            +++G+ +NE  + +L G    +W+ +   DD +D ++V+SF + T +L++   + +EE  
Sbjct: 457  LKHGLEVNEIVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIG--ETVEEVS 514

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              GF S   TL       + LVQV    +R + +    + NEW SP   S+  A  N  Q
Sbjct: 515  DTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHIRNG---VVNEWSSPQHRSIVAAATNERQ 571

Query: 187  VLLATGGGHLVYLEIG-DGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDI 244
            V +A   G +VY E+  DG L E    +  +  ++ L +  + E    S   AVG   D 
Sbjct: 572  VAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDC 630

Query: 245  SVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLN 297
            +VRI SL P+  L +K        P ++ + + E  S      YL   L  G  L  +L+
Sbjct: 631  TVRILSLDPESTLESKSVQALTAAPSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLD 690

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKE 355
              TGELTD ++  LG + + L   S +  T V A S R  + +S    K    + +N +E
Sbjct: 691  EVTGELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEE 750

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFA 414
            +     F S    + +       L I  I+ +    I +SIPL   PR++      R F 
Sbjct: 751  LEWGWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFY 810

Query: 415  ICSLKNQSCAEESEMHFV----------RLLDDQTFEF---------------------- 442
                 N + A E     +          R+L    F +                      
Sbjct: 811  TIEADNNTLAPELREQLMAAPTAVNGDARVLPPDEFGYPRGNGRWASCISVVDPLGDGEE 870

Query: 443  -----ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 494
                 +    LD  E   S+   SF S D   +  VGT   ++      T+G I V+   
Sbjct: 871  LEPGVVQRIDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFS 930

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
            EDG+ L+ I + + +    +L  F G+L+A I + +++Y   LR    R+ Q+E      
Sbjct: 931  EDGRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ-- 987

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
             L + + T+G  I+VGD+   +  + YK E   +   A D  A W +   ++D D   GA
Sbjct: 988  -LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGA 1046

Query: 614  ENNFNLFTVR--KNSEGATDEERGRLEVV-GEYHLGEFVNRFRHGSLV--MRLPDS---- 664
            +   NL+ +R  + +   +DE    + +V    +L    NR    + V    +P S    
Sbjct: 1047 DKFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKT 1106

Query: 665  --DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               VG    +++G   G IGV I  +  E   F + L+ +LR     + G +H  +R   
Sbjct: 1107 NLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGC- 1165

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
                 V  K  +DGDL E +  L   +   I+  ++ SV E+ +++
Sbjct: 1166 ----YVPVKGVIDGDLCERYTMLPNDKKQMIAGELDRSVREIERKI 1207


>gi|358366518|dbj|GAA83139.1| nuclear mRNA splicing factor [Aspergillus kawachii IFO 4308]
          Length = 1209

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 201/818 (24%), Positives = 354/818 (43%), Gaps = 97/818 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   +L P++D  VV++      Q+ T SGA    S R +++G+ ++E    EL  
Sbjct: 411  LNLVETINSLNPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPS 470

Query: 85   I-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + +  D FD ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 471  VPSAVWTTKLTRSDEFDAYIILSFANGTLVLSIG--ETVEEVTDTGFLSTAPTLAVQQLG 528

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+Q+    +R + +  R   NEW +P   S+  A  N  QV +A   G +VY E+  
Sbjct: 529  EDSLIQIHPRGIRHILADRR--VNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDS 586

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  Q+   ++CL +  + E    S   AVG   D +VRI SL PD  L  K 
Sbjct: 587  DGSLAEYDERRQMSGTVTCLSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPDSTLENKS 645

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + +    S      YL   L  G  L  +L+  TGEL+D +   LG++
Sbjct: 646  VQALTAAPSALNIMSMADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSK 705

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
             + L   S K  T V   S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 706  AVKLFQVSVKGQTAVLGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMV 765

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   +  +SIPL   PRR     +   F +    N   +  +    
Sbjct: 766  GIQGQNLRIFSIEKLDNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKL 825

Query: 432  VR----------LLDDQTFEF----------------------ISTYPLDTFEYGCSILS 459
            +           +L  + F +                      + T  L+  E   SI +
Sbjct: 826  LEDSKSRGGDETVLPPEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAA 885

Query: 460  CSF-SDDSNVYYCVGTAYVLPEENEPTK--GRILVF-IVEDGK-LQLIAEKETKGAVYSL 514
              F S D   +  VGTA  +   N P    G I ++   EDG+ L+ I + + +    +L
Sbjct: 886  VPFTSQDDETFLVVGTAKDM-SVNPPKSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLAL 944

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDL 571
              F G+L+A I   +++Y     D G ++L  +C     ++   +   QT+G  IVV D+
Sbjct: 945  LGFQGRLVAGIGSLLRIY-----DLGMKQLLRKC--QAPVVPKTIVGLQTQGSRIVVSDV 997

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
             +S++ ++YK++E  +     D  + W +A  ++D +   G +   NL+ +R   K SE 
Sbjct: 998  RESVTYVVYKYQENVLIPFVDDSVSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEE 1057

Query: 629  ATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
            A ++        ERG       RLE++   +  +         LV        G    ++
Sbjct: 1058 ADEDGSGAHLIHERGYLQGTPNRLELMIHVYTQDIPTSLHKTQLV-------AGGRDILV 1110

Query: 674  FGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNF 732
            +    G IG++   +  E   F + L+  L      + G +H  +RS+    K V     
Sbjct: 1111 WTGFQGTIGMLVPFIGREDVDFFQNLEMQLAAQHPPLAGRDHLIYRSYYAPVKGV----- 1165

Query: 733  LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +DGDL E +  L       I+  ++ SV E+ +++ ++
Sbjct: 1166 IDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKISDM 1203


>gi|440478305|gb|ELQ59147.1| pre-mRNA-splicing factor rse-1 [Magnaporthe oryzae P131]
          Length = 1223

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 211/826 (25%), Positives = 355/826 (42%), Gaps = 84/826 (10%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            P + +    +P    + VE ++   ++ P++D  V +L  +   Q+ T SG     + R+
Sbjct: 400  PYEPVYFYPRPTENLALVESID---SMNPLMDLKVANLTEEDAPQIYTVSGKGARSTFRM 456

Query: 68   VRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            +++G+ +NE  + +L G    +W+ +   DD +D ++V+SF + T +L++   + +EE  
Sbjct: 457  LKHGLEVNEIVASQLPGTPSAVWTTKLRRDDEYDAYIVLSFTNGTLVLSIG--ETVEEVS 514

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
              GF S   TL       + LVQV    +R + +    + NEW SP   S+  A  N  Q
Sbjct: 515  DTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHIRNG---VVNEWSSPQHRSIVAAATNERQ 571

Query: 187  VLLATGGGHLVYLEIG-DGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDI 244
            V +A   G +VY E+  DG L E    +  +  ++ L +  + E    S   AVG   D 
Sbjct: 572  VAVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTVTSLSLGEVPEGRLRSSYLAVGC-DDC 630

Query: 245  SVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLN 297
            +VRI SL P+  L +K        P ++ + + E  S      YL   L  G  L  +L+
Sbjct: 631  TVRILSLDPESTLESKSVQALTAAPSALSIMSMEDSSSGGTTLYLHIGLNSGVYLRTVLD 690

Query: 298  MKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKE 355
              TGELTD ++  LG + + L   S +  T V A S R  + +S    K    + +N +E
Sbjct: 691  EVTGELTDTRQKFLGPKAVRLFQVSVQKRTCVLALSSRSWLGFSDPVTKGFTMTPLNYEE 750

Query: 356  VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTFA 414
            +     F S    + +       L I  I+ +    I +SIPL   PR++      R F 
Sbjct: 751  LEWGWNFVSEQCEEGMVGVNGQFLRIFAIEKLGDNVIQKSIPLTYTPRKLAKHPTQRIFY 810

Query: 415  ICSLKNQSCAEESEMHFV----------RLLDDQTFEF---------------------- 442
                 N + A E     +          R+L    F +                      
Sbjct: 811  TIEADNNTLAPELREQLMAAPTAVNGDARVLPPDEFGYPRGNGRWASCISVVDPLGDGEE 870

Query: 443  -----ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 494
                 +    LD  E   S+   SF S D   +  VGT   ++      T+G I V+   
Sbjct: 871  LEPGVVQRIDLDNNEAALSMAVVSFASQDGESFLVVGTGKDMVVNPRRFTEGYIHVYRFS 930

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
            EDG+ L+ I + + +    +L  F G+L+A I + +++Y   LR    R+ Q+E      
Sbjct: 931  EDGRELEFIHKTKVEEPPTALLPFQGRLVAGIGRMLRIYDLGLR-QLLRKAQAEVAPQ-- 987

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
             L + + T+G  I+VGD+   +  + YK E   +   A D  A W +   ++D D   GA
Sbjct: 988  -LIVSLNTQGSRIIVGDVQHGLIYVAYKSETNRLIPFADDTIARWTTCTTMVDYDSTAGA 1046

Query: 614  ENNFNLFTVR--KNSEGATDEERGRLEVV-GEYHLGEFVNRFRHGSLV--MRLPDS---- 664
            +   NL+ +R  + +   +DE    + +V    +L    NR    + V    +P S    
Sbjct: 1047 DKFGNLWILRCPEKASQESDEPGSEVHLVHSRDYLHGTSNRLALMAHVYTQDIPTSICKT 1106

Query: 665  --DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               VG    +++G   G IGV I  +  E   F + L+ +LR     + G +H  +R   
Sbjct: 1107 NLVVGGQEVLLWGGFQGTIGVLIPFVSREDADFFQSLEQHLRSEDPPLAGRDHLMYRGC- 1165

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
                 V  K  +DGDL E +  L   +   I+  ++ SV E+ +++
Sbjct: 1166 ----YVPVKGVIDGDLCERYTMLPNDKKQMIAGELDRSVREIERKI 1207


>gi|367050506|ref|XP_003655632.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
 gi|347002896|gb|AEO69296.1| hypothetical protein THITE_2119532 [Thielavia terrestris NRRL 8126]
          Length = 1211

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 197/812 (24%), Positives = 356/812 (43%), Gaps = 90/812 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P+VD  V +L  +   Q+    G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESLNSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 476  SAVWTTKLTKYDEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQLGEE 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  A  N SQV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAAATNESQVVIALSSGEIVYFEMDADG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E  + S   AVG   D +VRI  L P+  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSLGKVPEGLTRSSFLAVGC-DDCTVRILGLDPESTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFEGIS-----YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P S+ + + E  +     YL   L  G  L  +L+  TGELTD +   LG +P  
Sbjct: 650  ALTSAPSSLSIMSMEDSTGGNTLYLHIGLHSGVYLRTVLDEVTGELTDTRSKFLGPKPTK 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S +N   V A S RP + Y    +K  + + ++  E+ +   F+S    + +    
Sbjct: 710  LFQVSVQNQPCVLALSSRPWLGYMDPLSKNFVMTPLSYAELEYGWNFSSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAI--------CSLKNQSCAE 425
               L I TI+ + +  I +SIPL   P+R+  H EQ   + I          L+ Q  A+
Sbjct: 770  ANFLRIFTIEKLGETMIQKSIPLTYTPKRLVKHPEQPYFYTIEADNNTLPPELRAQLLAQ 829

Query: 426  ESEMHF-VRLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCS 461
               ++    +L  + F +                +S  P       L+  E   S     
Sbjct: 830  SGAVNGDATVLPPEDFGYPRAKGRWASCISVVDPVSEEPRVLQRVDLEGNEAAVSAAVVP 889

Query: 462  F-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F S +   +  VGT   ++    + T+G I V+   EDG+ L+ I +   +    +L  F
Sbjct: 890  FASQEGESFLIVGTGKDMVLNPRQFTEGYIHVYRFHEDGRSLEFIHKTRVEEPPMALIPF 949

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
             G+LLA I + +++Y   LR    + L+   G     L + +QT+G+ IVVGD+ + ++ 
Sbjct: 950  QGRLLAGIGKTLRVYDLGLR----QLLRKAQGEVAQQLIVSLQTQGNRIVVGDVQQGVTY 1005

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEER--- 634
            ++YK E   +     D    W + + ++D +   G +   NL+ VR     + + +    
Sbjct: 1006 VVYKPESNKLIPFVDDTINRWTTCITMVDYESVAGGDRFGNLWIVRAPERASQESDEPGS 1065

Query: 635  ---------------GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                            RL ++  ++  +        +LV       VG    +++  + G
Sbjct: 1066 EVQLLHARSYLHGAPNRLNLMAHFYPQDLPTSITKTNLV-------VGGQDVLVWSGIQG 1118

Query: 680  VIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             +GV I  +  E   F + L++++R     + G +H  +R +      V  K  +DGDL 
Sbjct: 1119 TVGVLIPFVSREDVDFFQNLESHMRSEDPPLAGRDHLIYRGY-----YVPVKGVIDGDLC 1173

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 ERFSLLPNDKKQMIAGELDRSVREVERKISDI 1205


>gi|170041368|ref|XP_001848437.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
 gi|167864946|gb|EDS28329.1| splicing factor 3B subunit 3 [Culex quinquefasciatus]
          Length = 1215

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 194/862 (22%), Positives = 360/862 (41%), Gaps = 130/862 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L +           ++   +  PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRPLKNLVM-----------VDEIHSFAPILGCQVADLANEDTPQLYLACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             S+R++R+G+ ++E A  EL G    +W+++   DD FD +++VSF++ T +L++   D 
Sbjct: 433  SSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRADDEFDAYIIVSFVNATLVLSIG--DT 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLCCSALGDDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIIKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N+ QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      +   AVG
Sbjct: 549  VNSRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMALGSVPAGEQRAWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE---------------GISYLL 283
            +  D +VRI SL   + ++   +  + +P +   LC  E               G  YL 
Sbjct: 609  L-ADNTVRIISLDPADCLSPRSM--QALPSAAESLCIVEMGTGESNEEGTVSTAGCFYLN 665

Query: 284  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 343
              L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S R  + Y   
Sbjct: 666  IGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYYQ 725

Query: 344  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPR 402
             +   + ++ + + +   F+S    + +       L I  ++ +  +  + + PL   P+
Sbjct: 726  NRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRILALEKLGAVFNQITFPLEYTPK 785

Query: 403  RICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE----------------FIS-T 445
            R     ++    I    + +  EE++    + + D+  E                FI+  
Sbjct: 786  RFLIHNETGKLIISETDHNAYTEETKNIRKKQMADEMREAAGEDEQELANEMADAFINEV 845

Query: 446  YPLDTF---------------------------------EYGCSILSCSFSDDSNVYYCV 472
             P D F                                 E   S+    F+ D   Y   
Sbjct: 846  LPEDQFSSPKAGAGMWASQIRVMDPINGHTYSKVQLAQNEAVMSMALVRFTVDQKWYVVA 905

Query: 473  GTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            G A  L    + T G    +  +     +L+     E   A  ++ +F G++L  I + +
Sbjct: 906  GVAKDLALNPKITNGGFIDVYKYDFHTHQLEHYHRTEIDDAPGAICSFQGRVLVGIGKVL 965

Query: 530  QLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
            ++Y     D G ++L  +C  + HI    + +Q  G  + V D+ +SI  + YK  E  +
Sbjct: 966  RIY-----DLGKKKLLRKC-ENKHIPNQIVNIQAMGSRVFVSDVQESIYCVKYKRAENQL 1019

Query: 588  EERARDYNANWMSAVEILDDDIYLGAEN--NFNLFTVRKNSEGATDE---------ERGR 636
               A D +  W++   +LD D    A+   N ++  +  +     DE         +RG 
Sbjct: 1020 IIFADDTHPRWITTSTLLDYDTVATADKFGNVSVLRLPHSVSDDVDEDPTGNKALWDRGL 1079

Query: 637  L-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-P 688
            L       E V  +HLGE +   +  +L+        G   ++I+ T++G +G +     
Sbjct: 1080 LNGASQKAENVCTFHLGETIMSLQKATLI-------PGGSESLIYATMSGTVGALVPFTS 1132

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
             E + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   +
Sbjct: 1133 REDFDFFQHLEMHMRNENPPLCGRDHLSFRSY-----YYPVKNVMDGDLCEQFTSMDPAK 1187

Query: 749  MDEISKTMNVSVEELCKRVEEL 770
               I+  +  +  E+ K++E++
Sbjct: 1188 QKSIATDLGRTPNEVAKKLEDI 1209


>gi|157131296|ref|XP_001662180.1| spliceosomal protein sap [Aedes aegypti]
 gi|108881836|gb|EAT46061.1| AAEL002709-PA [Aedes aegypti]
          Length = 1215

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 194/862 (22%), Positives = 359/862 (41%), Gaps = 130/862 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+QL  L +        V+ +  Y    PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRQLKNLVM--------VDEIHSY---APILGCQVADLANEDTPQLYLACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             S+R++R+G+ ++E A  EL G    +W+++   D+ FD +++VSF++ T +L++   D 
Sbjct: 433  SSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDEEFDAYIIVSFVNATLVLSIG--DT 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKR--VNEWKAPGKKTITKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S   AVG
Sbjct: 549  VNQRQVVIALSGGELVYFEMDPTGQLNEYTERKKMPSDVMCMALGSVPAGEQRSWFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE---------------GISYLL 283
            +  D +VR+ SL   + ++   +  + +P +   LC  E               G  YL 
Sbjct: 609  L-ADNTVRVISLDPSDCLSPRSM--QALPSAAESLCIVEMGTGDTNEEGVASSAGCIYLN 665

Query: 284  CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 343
              L +G LL  +L+  +G+L D +   LG++P+ L     + +  V A S R  + Y   
Sbjct: 666  IGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYFQ 725

Query: 344  KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPR 402
             +   + ++ + + +   F+S    + +       L I  ++ +  +  + + PL   P+
Sbjct: 726  NRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLGAVFNQITFPLEYTPK 785

Query: 403  RICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE----------------FIS-T 445
            R     ++    I    + +  EE++    + + D+  E                FI+  
Sbjct: 786  RFLIHNETGKLVISETDHNAYTEETKNIRKKQMADEMREAAGEDEQELANEMADAFINEV 845

Query: 446  YPLDTF---------------------------------EYGCSILSCSFSDDSNVYYCV 472
             P D F                                 E   S+    F+ D   Y   
Sbjct: 846  LPEDVFSAPKAGTGMWASQIRVMDPINGHTYSKVQLAQNEAVLSMALVRFAVDQKWYVVA 905

Query: 473  GTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            G A  L    +   G    +  + V   +L+     E   A  ++  F G++L  + + +
Sbjct: 906  GVAKDLQMNPKIANGGFIDVYKYDVHTHQLEHYHRTEIDDAPGAIAGFQGRVLVGVGRVL 965

Query: 530  QLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
            ++Y     D G ++L  +C  + HI    + +Q  G  + V D+ +SI  + YK  E  +
Sbjct: 966  RIY-----DLGKKKLLRKC-ENKHIPNQIVNIQAMGSRVFVSDVQESIYCIKYKRAENQL 1019

Query: 588  EERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD-----------EERGR 636
               A D +  W++   +LD D    A+   N+  +R     + D            +RG 
Sbjct: 1020 IIFADDTHPRWITTSTLLDYDTVATADKFGNIAILRLPHSVSDDVDEDPTGNKALWDRGL 1079

Query: 637  L-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-P 688
            L       E +  +HLGE +   +  +L+        G   ++I+ T++G +G +     
Sbjct: 1080 LNGASQKAENICTFHLGETIMSLQKATLI-------PGGSESLIYATMSGTVGALVPFTS 1132

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
             E Y F + L+ ++R     + G +H  +RS+         K+ +DGDL E F  +   +
Sbjct: 1133 REDYDFFQHLEMHMRNENTPLCGRDHLSYRSY-----YYPVKHVMDGDLCEQFTSMDPAK 1187

Query: 749  MDEISKTMNVSVEELCKRVEEL 770
               I+  +  +  E+ K++E++
Sbjct: 1188 QKSIASDLGRTPNEVAKKLEDI 1209


>gi|195996829|ref|XP_002108283.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
 gi|190589059|gb|EDV29081.1| hypothetical protein TRIADDRAFT_49802 [Trichoplax adhaerens]
          Length = 1208

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 204/829 (24%), Positives = 364/829 (43%), Gaps = 120/829 (14%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI    V DL  +   Q+    G   + +LRI+R+G+ + E A  EL G   G+W++
Sbjct: 403  SLCPITGCQVADLANEDTPQLYVSCGRGPNSTLRILRHGLEVTEMAVSELPGNPNGVWTV 462

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            ++S    +D ++VVSF++ T +L++   + +EE    GF   T TL C     + L+QV 
Sbjct: 463  KTSASAEYDAYIVVSFVNATLVLSIG--ESVEEVSDSGFLGTTPTLHCCQIGDDALLQVY 520

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-V 209
            +  +R V +  R   NEWK+P    ++    N  QV +A  GG LVY E+   G L E  
Sbjct: 521  ANGIRHVRADKR--VNEWKAPGKKIISKCAVNNRQVAIALTGGELVYFEMDLSGQLNEYT 578

Query: 210  KHAQLEYEISCLDIN--PIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
            +  +   E+ C+ I   P+GE     +  AVG+  D +VR+ SL P   L          
Sbjct: 579  ERREFSSEVICMSIGSVPVGEK--RCRFLAVGL-ADHTVRMISLDPSDCLQPMSMQALPT 635

Query: 267  IPRSVLLCAF---------EGI---SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
            +P S+ + A          +G+    YL   L +G LL  +L+  TG+++D +   LG++
Sbjct: 636  VPESLCIVAMGSGDSSESEQGVLSTYYLNIGLQNGVLLRSVLDSVTGDMSDTRTRYLGSR 695

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
            P+ L     +N+  V A S R  + Y        + ++   + +   F+S   P+ +   
Sbjct: 696  PVRLFKVKIQNSEAVLAISSRSWLGYMFQSVSRLTPLSYDALDYASGFSSDQCPEGVVSI 755

Query: 375  KEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAIC------------SLKNQ 421
                L I  ++ +  +  + +I L   PRR    +Q+    +             S + Q
Sbjct: 756  AGDTLRILALEKLGAVFNQMTINLKLTPRRFAIDQQNSNLVVVGSDHLCFTDSTKSERKQ 815

Query: 422  SCA---------EESEM------HFVR------------------------LLDDQTFEF 442
              A         EE+E+       F+                         L  DQ+ E 
Sbjct: 816  QMAKEIIESAGDEEAELAKEVAESFMNEVLPATEFGEPKAGNGQWASCIQLLAPDQSLE- 874

Query: 443  ISTYPLDTFEYGCSILSCSFS-DDSNVYYCVGTAYVLPEENEPTKGRIL-VFIVEDGKLQ 500
                 LD  E   S+  C F+      +  VG A  L      + G ++  + + +G+L+
Sbjct: 875  -----LDQDEAALSVAICRFAYKPDETFVVVGVAKELNLNPSSSSGGLMNTYRMANGQLE 929

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-V 559
            L+ +   +    ++ AF G+LL    + +++Y     D G ++L  +C +      +  +
Sbjct: 930  LVHKTVVEEVPRAMAAFQGRLLVGTGRILRVY-----DLGRKKLLRKCENKNFPYRIVTI 984

Query: 560  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD-DDIYLGAENNFN 618
             + G  ++VGD+ +S+  + Y+ +E  +   A D +  +++A   LD D I +G  + F 
Sbjct: 985  SSMGSRVIVGDVQESVHFVKYRAKENRLVVFADDVSPRYVTATCFLDYDTIAVG--DKFG 1042

Query: 619  LFTVRKNSEGATDE------------ERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
               + + S+   DE            +RG L   G          F  G  VM L  + +
Sbjct: 1043 SIAILRLSDDINDEIEEDPTGAKAFWDRGLLN--GASQKANLEASFYIGETVMSLQKTTI 1100

Query: 667  --GQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
              G   ++I+ T++G IGV+  LP    E+  F + L+ +LR     + G +H  +RS+ 
Sbjct: 1101 IPGGSESLIYTTLSGSIGVL--LPFTSREEVDFFQHLEMHLRSENAPICGRDHLAYRSY- 1157

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   AKN +DGD+ E F  L  ++   ++  ++ +  E+ K++E++
Sbjct: 1158 ----YFPAKNVIDGDMCEQFNALDGSKRRTLAMELDRTPPEISKKLEDM 1202


>gi|361131929|gb|EHL03544.1| putative Pre-mRNA-splicing factor rse1 [Glarea lozoyensis 74030]
          Length = 967

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 198/792 (25%), Positives = 351/792 (44%), Gaps = 72/792 (9%)

Query: 5   YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
           Y  P+Q   L+L           +E   ++ P++D  V +L      Q+ +  G     +
Sbjct: 216 YFHPRQAENLSL-----------VESIDSMNPLMDCKVANLTNADAPQIYSICGTGARST 264

Query: 65  LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            R +++G+ ++E    EL G+   +W+ + +  D +D ++++SF + T +L++   + +E
Sbjct: 265 FRSLKHGLEVSEIVESELPGVPSAVWTTKLTQGDTYDAYIILSFSNGTLVLSIG--ETVE 322

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
           E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 323 EVTDTGFLSTASTLAVQQLGEDGLIQVHPKGIRHIRADRR--VNEWAAPQHRSIVAATTN 380

Query: 184 ASQVLLATGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             QV +A   G +VY E+  DG L E  +  ++   ++CL +  + E    S   AVG  
Sbjct: 381 ERQVAVALSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLSLGDVPEGRVRSPYLAVGC- 439

Query: 242 TDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNF 294
            D +VRI SL PD  L  K        P ++ + A    S      YL   L  G  L  
Sbjct: 440 DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSGGSTLYLHIGLYSGVYLRT 499

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVN 352
           +L+  TGELTD +   LG +P  L   S +  T V A S RP + Y+    K  + + +N
Sbjct: 500 VLDEVTGELTDTRLRFLGPKPAKLFKVSVQGQTAVLALSSRPWLGYTDPVTKAFMLTPLN 559

Query: 353 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS 410
              +     F+S    + +   +   L I +I+ +   L   SIPL   PRR + H EQ 
Sbjct: 560 YPALEWGWNFSSEQCTEGMVGIQGQNLRIFSIEKLTDNLLQESIPLTYTPRRFVRHPEQP 619

Query: 411 RTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
             + I S  N       +    +LL+D +        L   E+G       ++       
Sbjct: 620 LFYTIESDNNVLSPATKQ----KLLEDPSVVNGDAAVLPPEEFGYPRGRGHWAS------ 669

Query: 471 CVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
           C+         +  T+ ++L  I  +G    + E        +L  F G+LLA + + ++
Sbjct: 670 CISVV------DPVTEKKVLHTIHFEGNEAAVEEPPM-----ALLGFQGRLLAGVGKDLR 718

Query: 531 LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
           +Y   ++    R+ Q+E   +   L + ++T+G  I+V D+ +S+ +++YK +E  +   
Sbjct: 719 IYDLGMK-QLLRKSQAEVVPN---LIVGLRTQGSRIIVSDVQESVVMVVYKFQENRLIPF 774

Query: 591 ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG------RLEVVG 641
             D  A W S   ++D +   G +   NL+ +R   K SE A +E  G      R  + G
Sbjct: 775 VDDTIARWTSCSTMVDYETVAGGDKFGNLWLLRCPAKASEEADEEGSGAHLLHERQYLQG 834

Query: 642 EYHLGEFVNRFRHGSLVMRLPDSD--VGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKL 698
             H    +  F    + M +  ++  VG    +++  + G +G+ I  +  E   F + L
Sbjct: 835 APHRLTLMAHFYSQDIPMSIQKTNLVVGGPDCLLWAGLQGTLGILIPFVGREDVDFFQTL 894

Query: 699 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
           + ++R     + G +H  +RS+      V  K  +DGDL E +  L   +   I+  ++ 
Sbjct: 895 EQHMRNEDAPLAGRDHLIYRSY-----YVPVKGMIDGDLCERYTLLPTDKKQMIAGELDR 949

Query: 759 SVEELCKRVEEL 770
           SV E+ +++ ++
Sbjct: 950 SVREIERKISDI 961


>gi|402077250|gb|EJT72599.1| pre-mRNA-splicing factor RSE1 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1216

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 205/820 (25%), Positives = 360/820 (43%), Gaps = 101/820 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   ++ P++D  V +L  +   Q+ T SG     + R++++G+ +NE  + +L G  
Sbjct: 416  LVESVESMNPLMDLKVANLTDEDAPQIYTVSGNGARSTFRMLKHGLEVNEIVASQLPGTP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + + DD +D+++V+SF + T +L++   + +EE    GF S   TL       +
Sbjct: 476  SAVWTTKIARDDQYDSYIVLSFTNGTLVLSIG--ETVEEVSDTGFLSSVSTLAVQQLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DG 204
             LVQV    +R + S    + NEW +P   S+  A  N  QV +A   G +VY E+  DG
Sbjct: 534  GLVQVHPRGIRHIRSG---VVNEWPTPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL P+  L +K   
Sbjct: 591  SLAEYDERKEMSGTVTSLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPETTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P ++ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPSALSIMAMEDSSSGGTTLYLHIGLNSGVYLRTVLDEVTGELTDTRQKFLGPKAV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   S +  T V A S R  + YS   +K    + ++ +E+     F S    + + + 
Sbjct: 710  RLFQVSVQGMTCVLALSSRSWLGYSDPISKGFTMTPLSYEELEWAWNFRSEQCEEGM-VG 768

Query: 375  KEGEL----TIGTIDD--IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE 428
             +G+      IG + D  IQK    SI L   P+++        F     +N +   E  
Sbjct: 769  VQGQFLRICAIGKLGDSMIQK----SISLAYTPKKLIKNPTHPIFYTIEAENNTLPPELR 824

Query: 429  MHFV----------RLLDDQTFEF---------------------------ISTYPLDTF 451
               +          ++L  + F +                           +    L+  
Sbjct: 825  EQLLAAPTAVNGDTKVLPPEEFGYPRGNGRWASCISVVDPLGDGEEREPSVLQQIHLENN 884

Query: 452  EYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKET 507
            E   S+    F S DS  +  VGT   ++      T+G I V+  +EDG+ L+ I + + 
Sbjct: 885  EATVSVAVVPFASQDSESFLVVGTGKDMVLNPRCFTEGYIHVYRFLEDGRELEFIHKTKV 944

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
            +    +L AF GKL+A + + +++Y   LR    R+ QSE       + + +QT+G  IV
Sbjct: 945  EEPPMALLAFQGKLVAGVGRSLRIYDLGLRQL-LRKAQSEVAPR---VIVSLQTQGSRIV 1000

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE 627
            VGD    +  + YK E   +   A D    W +   ++D +   G +   N++ +R   +
Sbjct: 1001 VGDSQHGLIYVAYKQEANKLIAFADDSIQRWTTCSTMVDYESTAGGDKFGNIWILRCPEK 1060

Query: 628  GATDEERGRLEVVGEYHLGEFVNRFRHG-----SLVMRLPDSD-----------VGQIPT 671
             + + ++   EV    HL      + HG     +L+  +   D           VG    
Sbjct: 1061 ASQEADQPGSEV----HLMH-ARDYLHGTSNRLALMAHVYTQDIATSICKTNLVVGGQEV 1115

Query: 672  VIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            +++G + G IGV I  +  E   F + L+ ++R     + G +H  +RS+      V  K
Sbjct: 1116 LLWGGIQGTIGVLIPFVSREDADFFQTLEQHMRSEDPPLAGRDHLMYRSY-----YVPVK 1170

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +DGDL E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1171 GVIDGDLCERFTMLPNDKKQMIAGELDRSVREIERKISDI 1210


>gi|198420618|ref|XP_002125906.1| PREDICTED: similar to Splicing factor 3B subunit 3
            (Spliceosome-associated protein 130) (SAP 130)
            (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130)
            (STAF130) [Ciona intestinalis]
          Length = 1216

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 199/861 (23%), Positives = 365/861 (42%), Gaps = 127/861 (14%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFYAPRALRNLVL-----------VDELDSLSPIMTCLISDLANEDTPQLYVTCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W+++   ++ FD++++VSF++ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVKIKEEEEFDSYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     N LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGENALVQVYPDGIRHIRADKR--VNEWKTPGKKTILRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  E+ C+D++ +      ++  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDQSGQLNEYTERKEMNSEVVCMDLSKVPPTEQRTRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGIS------------YLLCAL 286
            +  D +VRI SL   + +    +      P SV +    G               L   L
Sbjct: 609  L-ADNTVRIISLDPTDCLQPLSMQALPATPESVCIIEIGGGEDETGAQKASGGLVLNIGL 667

Query: 287  GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL 346
             +G LL   L+  TG+L+D +   LGT+ + L    ++ +  V A S R  + Y    + 
Sbjct: 668  QNGVLLRTTLDNVTGDLSDTRTRYLGTRAVKLFRVLTQGSDAVLAMSSRTWLSYQHQNRF 727

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHPRRIC 405
              + ++ + +     F S   P+ +       L I  ++ +  + +  S  L   PRR  
Sbjct: 728  HLTPLSYESLEFASGFASEQCPEGIVAISANTLRILALEKLGTVFNQASTGLQYTPRRFA 787

Query: 406  HQEQSRTFAICSL------------KNQSCAEE-------------SEMHF--------- 431
                S    I               + Q  AEE             +EM           
Sbjct: 788  IHYDSGNVIILETDHNAYTEETKENRKQQMAEEMIEAAGEDERELAAEMTAAFLRESLPE 847

Query: 432  ----------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSF---SDDSNVYYCV 472
                            +RL+  ++ E I    L+  E   SI  C F   SDD+ V   V
Sbjct: 848  DKFGASKAGPGMWSSQIRLMHPRSGETIQKICLEQNEAALSIAICKFPNNSDDTFVLVGV 907

Query: 473  GTAYVLPEENEPTKGRILVFIV--EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
                ++        G I  + +  E  KL+L+ +        ++  + G++L  + + ++
Sbjct: 908  ACELLINPRQARGGGEIHTYKINEEGNKLELVHKTVVDEVPSAICPYQGRVLIGVGKLLR 967

Query: 531  LYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
            +Y     D G ++L  +C  + HI      +Q  G  I+V D+ +S+  + Y+  E  + 
Sbjct: 968  IY-----DLGKKKLLRKC-ENKHIPNYIASIQAVGHRIIVCDVQESVHWVRYRRHENQLV 1021

Query: 589  ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE-----------RG-- 635
              A D    W+++  +LD +    ++   N+  +R  S+   D +           RG  
Sbjct: 1022 VFADDTYPRWVTSATVLDWNTVAVSDKFGNISVLRLPSDVNDDVQDDPSGTKALWTRGIL 1081

Query: 636  -----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PH 689
                 + EV+  YH+GE V   +  +L+        G   ++++ T++G IG++     H
Sbjct: 1082 NGAMQKCEVLCMYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGSIGMLVPFTSH 1134

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            E + F + L+ ++R     + G +H  +RS+         KN +DGDL E F  +  ++ 
Sbjct: 1135 EDHDFFQHLEMHMRNECPPLLGRDHLAYRSY-----YFPVKNVIDGDLCELFNSMEASKQ 1189

Query: 750  DEISKTMNVSVEELCKRVEEL 770
              +++ ++    E+ K++E++
Sbjct: 1190 KSVAEELDRVPSEVSKKLEDI 1210


>gi|320037168|gb|EFW19106.1| pre-mRNA-splicing factor rse1 [Coccidioides posadasii str.
           Silveira]
          Length = 970

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 206/836 (24%), Positives = 359/836 (42%), Gaps = 104/836 (12%)

Query: 5   YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
           Y  P+    LNL           +E   +L P++   + +L      Q  T SG     +
Sbjct: 163 YFRPRPAENLNL-----------VESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARST 211

Query: 65  LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            R +++G+ ++E    EL  +   +W+ + + +D +D ++++SF + T +L++   + +E
Sbjct: 212 FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVE 269

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
           E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  N
Sbjct: 270 EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATN 327

Query: 184 ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             QV +A   G +VY E+  DG L E  +  ++   ++CL +  I      S   AVG  
Sbjct: 328 ERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCLSLGEIPPGRVRSSFLAVGC- 386

Query: 242 TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
            D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 387 DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRT 446

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
           +L+  TGEL+D +   LG + + L + S K    V A S RP + YS    K  + + ++
Sbjct: 447 VLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLD 506

Query: 353 LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
              +     F+S    + +   +   L I +I+ +   L   +IPL   PR      +  
Sbjct: 507 YVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQP 566

Query: 412 TFAICSLKNQSCAEESEMHF----------VRLLDDQTFEF------------------- 442
            F +    N   +  ++             V  L  + F +                   
Sbjct: 567 LFYVIEADNNILSPSTKAKLLQDSKAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINS 626

Query: 443 ---ISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IV 494
              IS   L+  E   S+ +  FS  D   +  VGT     V P  +  + G I ++   
Sbjct: 627 KAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQ 684

Query: 495 EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
           EDGK L+ I + + +   ++L AF G+LLA I + +++Y     D G ++L  +C     
Sbjct: 685 EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVV 739

Query: 553 HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
             L + +QT+G  I+V D+ +S++ ++YK++E  +   A D  A W +   ++D +   G
Sbjct: 740 PRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAG 799

Query: 613 AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            +   NL+ +R   K SE A ++  G   +    +L    NR    SL++     D   I
Sbjct: 800 GDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNRL---SLMVHFYPQD---I 853

Query: 670 PTVIFGT--------------VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
           PT I  T              + G +G++   +  E   F + L+  L      + G +H
Sbjct: 854 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDH 913

Query: 715 EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +RS+        AK  +DGDL E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 914 LIYRSY-----YAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKISDM 964


>gi|19115326|ref|NP_594414.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe 972h-]
 gi|73919127|sp|Q9UTT2.1|RSE1_SCHPO RecName: Full=Pre-mRNA-splicing factor prp12; AltName:
            Full=Pre-mRNA-processing protein 12; AltName:
            Full=Spliceosome-associated protein 130
 gi|6451681|dbj|BAA86918.1| Prp12p/SAP130 [Schizosaccharomyces pombe]
 gi|7981404|emb|CAB92100.1| U2 snRNP-associated protein Sap130 (predicted) [Schizosaccharomyces
            pombe]
          Length = 1206

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 195/811 (24%), Positives = 348/811 (42%), Gaps = 93/811 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQG-QVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            + ++E   +L  + D  ++     G+  Q+ T  G   + SLR +R G+   E  + EL 
Sbjct: 419  LSLVEEIPSLYSLTDTLLMKAPSSGEANQLYTVCGRGSNSSLRQLRRGLETTEIVASELP 478

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
            G    +W+L+ +  D +D+++++SF + T +L++   + +EE    GF S   TL     
Sbjct: 479  GAPIAIWTLKLNQTDVYDSYIILSFTNGTLVLSIG--ETVEEISDSGFLSSVSTLNARQM 536

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
              + LVQ+    +R + +  +   +EWK P    V  +  N  Q+++A   G LVY E+ 
Sbjct: 537  GRDSLVQIHPKGIRYIRANKQT--SEWKLPQDVYVVQSAINDMQIVVALSNGELVYFEMS 594

Query: 203  D----GILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI 257
            D    G L E +  + L   ++ L + P+ E    S    +    D +VR+ SL DL   
Sbjct: 595  DDVEGGQLNEYQERKTLTANVTSLALGPVQEGSRRSNFMCLAC-DDATVRVLSL-DL-YT 651

Query: 258  TKEHLGGE----------IIPRSVLLCAFEGIS--YLLCALGDGHLLNFLLNMKTGELTD 305
            T E+L  +          IIP +V      G+S  YL   L +G  L  ++++ +G+L D
Sbjct: 652  TLENLSVQALSSPANSLCIIPMNV-----NGVSTLYLHIGLMNGVYLRTVIDVTSGQLLD 706

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA 365
             +   LG + + +   + KN   V A S R  + YS  + L  S +    + H   F S 
Sbjct: 707  TRTRFLGPRAVKIYPITMKNQNTVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHASSFASE 766

Query: 366  AFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQ---------EQSRTF-- 413
              P+ +   ++  L I T+D +Q  L     PL   PR+I            +  R F  
Sbjct: 767  QCPEGIVAIQKNTLKIFTVDSLQDDLKSDIYPLICTPRKIVKHPNFPVLYILQSERNFDS 826

Query: 414  ------------AICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                        +    K      +S + F+ + D  + + I   PL   E   S+ +  
Sbjct: 827  FKYAQENGDVGSSYTKEKQNEHTSKSWVSFISVFDMISKKIIHESPLGDNEAAFSMTAAF 886

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKG---RILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
            F +    +   G+A  +  E         R+  F  E  KL+LI+  E  G   +L  F 
Sbjct: 887  FKNRDEFFLVAGSATNMDLECRTCSHGNFRVYRFHDEGKKLELISHTEIDGIPMALTPFQ 946

Query: 519  GKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            G++LA + + +++Y    K MLR     EL +       +   ++  +   IVV D   S
Sbjct: 947  GRMLAGVGRFLRIYDLGNKKMLRKG---ELSAV-----PLFITHITVQASRIVVADSQYS 998

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE 632
            +  ++YK E+  +   A D    W +   ++D D   G +   N++ +R  ++     DE
Sbjct: 999  VRFVVYKPEDNHLLTFADDTIHRWTTTNVLVDYDTLAGGDKFGNIWLLRCPEHVSKLADE 1058

Query: 633  ERGRLEVVGEYHLGEFVNRFRHG-SLVMRLPDSDV-----------GQIPTVIFGTVNGV 680
            E    +++   H   F+N   H   L+     +D+           G    +++  + G 
Sbjct: 1059 ENSESKLI---HEKPFLNSTPHKLDLMAHFFTNDIPTSLQKVQLVEGAREVLLWTGLLGT 1115

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            +GV    +  E   F ++L+  LRK    + G +H  +RS+    K V     +DGDL E
Sbjct: 1116 VGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRDHLAYRSYYAPVKCV-----IDGDLCE 1170

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +  L     + I+  ++ ++ E+ K++E+ 
Sbjct: 1171 MYYSLPHPVQEMIANELDRTIAEVSKKIEDF 1201


>gi|342320507|gb|EGU12447.1| Pre-mRNA-splicing factor RSE1 [Rhodotorula glutinis ATCC 204091]
          Length = 1212

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 201/815 (24%), Positives = 346/815 (42%), Gaps = 101/815 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS- 90
            +L PI+D  V +   +   Q+    G     SLRI+R G+ + E  S EL G    +W+ 
Sbjct: 417  SLAPILDAKVANYLGEDTPQIYAACGRGARSSLRILRQGLEVMEAVSSELPGAPIAVWTT 476

Query: 91   -LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
             LR+     +D ++++SF++ T +LA+   D +EE    GF S   TL       + L+Q
Sbjct: 477  KLRAEGASSYDAYIILSFVNGTLVLAIG--DTIEEVSDTGFISSAPTLGVQQLGDDALLQ 534

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            +    +R + +  R   NEWK     ++  AT N+ QV++    G LVY E+  DG L E
Sbjct: 535  IYPRGIRHILADKRV--NEWKVGARETIVCATTNSRQVVIGLSTGELVYFELDMDGQLNE 592

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 267
             +  + +  EI  L I  + E    +   AVG   D +VRI SL   N +    L     
Sbjct: 593  FQERKPMGAEILALSIAEVPEGRQRTPYLAVGC-ADSTVRIISLDPENTLDSLSLQALTA 651

Query: 268  PRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
            P S ++ A         +    ++   L +G LL  +L+  TG L D +   LG++P+ L
Sbjct: 652  PPSSIVMAEITDASIDKYHATMFVNIGLNNGVLLRTVLDPLTGSLGDTRTRFLGSRPVKL 711

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
                 + +  + A S RP + Y+    L ++ +    + +   F++   P+ L       
Sbjct: 712  ARVPVQGSPAILALSSRPWLNYAYRGILQFTPLIFDALDYAWSFSAELCPEGLIGIVGNS 771

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQS----------RTFAICSL-KNQSCAEE 426
            L I T   + QK+    I L   PR++     S          RTF+  ++ K  S    
Sbjct: 772  LRIFTFPRLGQKVQQTVIDLSYTPRQLLTSPHSRLLYTVEADHRTFSPSAIQKTISDMRM 831

Query: 427  SEMHF-------------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
            +EM                           VR++D  T E +    L+  E   S    +
Sbjct: 832  AEMEVDEEVLNLDPKEFGLPRGPAGQWASCVRVIDPVTAETVFKVDLEQNEAAFSAAIVT 891

Query: 462  FSDDSN-VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
            F    N V+  VGT     + P   +         + E  +L+L+ + E      +L AF
Sbjct: 892  FHSHPNEVFLVVGTGQDTSLAPRACKQAYLHTYKLLEEGRQLELLHKTEVDDIPKALIAF 951

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH-ILALYVQTRGDFIVVGDLMKSIS 576
             G+L+A + + ++LY     D G ++L  +  + G   + + + T+G  I+VGD  +S+ 
Sbjct: 952  QGRLVAGVGKALRLY-----DLGKKKLLRKAENKGFATMIMTLNTQGTRIIVGDAQESVY 1006

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT----DE 632
              +YK  E  +   A D +  W +A  I+ D   + A + F  F V +  +G +    D+
Sbjct: 1007 YALYKAPENRLLIFADDISPRWTTA-SIMVDYETVAAGDKFGNFFVNRLPKGVSSDVDDD 1065

Query: 633  ERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
              G               R  ++  YH+G+ +      +LV        G    +++  +
Sbjct: 1066 PTGAGIMHEKPYLMGAPHRTHLLAHYHIGDIITSLHKVALV-------AGGRDLLVYTGL 1118

Query: 678  NGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-FNNEKKTVDAKNFLDG 735
             G +GV+   + +E   F   L+ +LR     + G  H  +RS +   K TV      DG
Sbjct: 1119 MGTVGVLVPFVSNEDVDFFTTLEMHLRSEAPSLCGREHLAYRSAYTPVKATV------DG 1172

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL E +  L   +  +I+  +  +V E+ K+++ +
Sbjct: 1173 DLCEVYRSLPMAKQGQIAGELERTVSEVIKKLDNV 1207


>gi|258570355|ref|XP_002543981.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
 gi|237904251|gb|EEP78652.1| pre-mRNA splicing factor rse1 [Uncinocarpus reesii 1704]
          Length = 1209

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 208/837 (24%), Positives = 363/837 (43%), Gaps = 106/837 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   ++ P++   V +L      Q+ T  G     +
Sbjct: 402  YFRPRPAENLNL-----------VESINSVNPLMSCKVANLTEDDAPQLYTLCGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + + +D +D ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIILSFTNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  ++   ++CL +  I      S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCLSLGEILPGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGLKPVKLFSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L   +IPL   PR      +  
Sbjct: 746  YVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEHP 805

Query: 412  TFAICSLKNQSCA----------------EESEM------------HF---VRLLDD-QT 439
             F +    N   +                E SE+            H+   ++++D   +
Sbjct: 806  LFYVIGADNNILSPATKAKLLEDSKAVNGEASELPPEDFGYSRGTGHWASCIQVVDPINS 865

Query: 440  FEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTK--GRILVF-IVE 495
               +S   L+  E   S+ +  FS  D   +  VGT   +   N P+   G I ++   E
Sbjct: 866  KTVLSRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDM-VVNPPSSSCGYIHIYRFQE 924

Query: 496  DGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
            DGK L+ I + + +    +L AF G+LLA I   +++Y     D G ++L  +C     +
Sbjct: 925  DGKELEFIHKTKVESPPQALLAFQGRLLAGIGTNLRIY-----DLGMKQLLRKC--QAEV 977

Query: 555  LALYV---QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
            +   +   QT+G  I+V D+ +S++ ++YK++E  +   A D  A W +   ++D +   
Sbjct: 978  VPRMIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDIIARWTTCTTMVDYETVA 1037

Query: 612  GAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            G +   NL+ +R   K SE A ++  G   +    +L    NR    SL++     D   
Sbjct: 1038 GGDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNRL---SLMIHFYPQD--- 1091

Query: 669  IPTVIFGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
            IPT I  T              + G IG+ I  +  E   F + L+  L      + G +
Sbjct: 1092 IPTSIQKTQLVAGGRDILVWTGLQGTIGMLIPFVSREDVDFFQSLEMQLTSQTPPIAGRD 1151

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            H  +RS+        AK  +DGDL E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1152 HLIYRSY-----YAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|303324325|ref|XP_003072150.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
 gi|240111860|gb|EER30005.1| Splicing factor 3B subunit 3, putative [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1209

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 205/836 (24%), Positives = 359/836 (42%), Gaps = 104/836 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + +L      Q  T SG     +
Sbjct: 402  YFRPRPAENLNL-----------VESINSLNPLMSCKITNLTEDDAPQFYTLSGTGARST 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + + +D +D ++++SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIILSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  A  N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADRR--VNEWPAPQHRSIVAAATN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  ++   ++CL +  +      S   AVG  
Sbjct: 567  ERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMSGTVTCLSLGEVPPGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMVDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG + + L + S K    V A S RP + YS    K  + + ++
Sbjct: 686  VLDEVTGELSDTRTRFLGLKSVKLFSVSVKEQRAVLALSSRPWLGYSDLQTKNFMLTPLD 745

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L   +IPL   PR      +  
Sbjct: 746  YVPLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQETIPLAYTPRHFVRHPEQP 805

Query: 412  TFAICSLKNQSCAEESEMHF----------VRLLDDQTFEF------------------- 442
             F +    N   +  ++             V  L  + F +                   
Sbjct: 806  LFYVIEADNNILSPSTKAKLLQDSKAANGEVAELPPEDFGYPRGTGHWASCIQVVDPINS 865

Query: 443  ---ISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTA---YVLPEENEPTKGRILVF-IV 494
               IS   L+  E   S+ +  FS  D   +  VGT     V P  +  + G I ++   
Sbjct: 866  KAVISRIELEENEAAVSVAAVPFSSQDDETFLVVGTGKDMVVYPPSS--SCGFIHIYRFQ 923

Query: 495  EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
            EDGK L+ I + + +   ++L AF G+LLA I + +++Y     D G ++L  +C     
Sbjct: 924  EDGKELEFIHKTKVESPPHALLAFQGRLLAGIGRNLRIY-----DLGMKQLLRKCQAEVV 978

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              L + +QT+G  I+V D+ +S++ ++YK++E  +   A D  A W +   ++D +   G
Sbjct: 979  PRLIVGLQTQGSRIIVSDVQESVTYVVYKYQENRLIPFADDVIARWTTCTAMVDYETVAG 1038

Query: 613  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
             +   NL+ +R   K SE A ++  G   +    +L    NR    SL++     D   I
Sbjct: 1039 GDKFGNLWLLRCPQKASEEADEDGSGAHLIHERQYLQGAPNRL---SLMVHFYPQD---I 1092

Query: 670  PTVIFGT--------------VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            PT I  T              + G +G++   +  E   F + L+  L      + G +H
Sbjct: 1093 PTSIQKTQLVAGGRDILVWTGLQGTVGMLVPFVSREDVDFFQSLEMQLTSQTPPLAGRDH 1152

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +RS+        AK  +DGDL E++  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1153 LIYRSY-----YAPAKGTIDGDLCETYFTLPNDKKLMIAGELDRSVREIERKISDM 1203


>gi|353236335|emb|CCA68332.1| probable splicing factor 3B subunit 3 [Piriformospora indica DSM
            11827]
          Length = 1243

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 186/794 (23%), Positives = 342/794 (43%), Gaps = 105/794 (13%)

Query: 55   TCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRI 113
            T  G     + R +++G+ + E  + +L  I   +W+L+ +  D +D+++V+SFI+ T +
Sbjct: 470  TACGKGAKSTFRTLKHGLEVEENGNSDLPSIPNAVWTLKLAETDQYDSYIVLSFINGTLV 529

Query: 114  LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPP 173
            L+    +E+EE    GF S   TL       + L+QV    +R V S  R   NEW++P 
Sbjct: 530  LSFG--EEIEEIPNSGFLSSEPTLAAQQLGSDALLQVHPRGIRHVLSDKRV--NEWRAPI 585

Query: 174  GYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYEISCLDINPIGENPS 231
            G ++  AT N  QV++A     LVY E+  +G L E +  + +   +  L +  + E   
Sbjct: 586  GMAIVAATTNKRQVVVALSSAELVYFELDYEGQLNEFQERKAMGSTVLALSVGEVPEGLQ 645

Query: 232  YSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAF--------EGIS 280
              +  AVG   D +VRI SL PD  L +I+ + +     P S+ +              +
Sbjct: 646  RFKYLAVGC-EDQTVRIISLDPDSTLEMISLQAVTAP--PSSISIADMFDSSIDKHRPTT 702

Query: 281  YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 340
            ++   L +G LL  +L+   G+L D +   LG +P+ L       +  V A S R  + Y
Sbjct: 703  FVNIGLQNGVLLRTVLDPTNGKLADTRTRFLGNRPVRLVRTQVHGSPGVLALSSRSWLNY 762

Query: 341  SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGE 399
            +    + ++ +    +   C  N+   PD         L I  +  +  KL    +PL  
Sbjct: 763  TYQGLVHFTPLAYDRLDGACSVNAELCPDGFIGIANNTLRIFQVPKLGSKLKQEILPLSY 822

Query: 400  HPRRICHQEQSRTFAICSLKNQSCAE-----------------ESEM---------HF-- 431
             PR+     Q+  F +    +++ +E                 + EM         HF  
Sbjct: 823  TPRKFVSHPQNSYFYLIESDHRAMSETMIEERVKAIEMSGEKVDREMLELDPRIYGHFKA 882

Query: 432  --------VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA---YVLP 479
                    +R++D      ++ + LD  E   SI    F + +  +   VGTA   ++ P
Sbjct: 883  PEGVWASCIRIIDPVNLRSVAAFSLDNNEAAFSIAVVPFAARNGELLLVVGTAVDTHLAP 942

Query: 480  EENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWM 535
                    R+  F      L+L+ + +      +L AF G+L+A + + ++LY    K +
Sbjct: 943  RSCSTGYLRVYSFTEGGSGLELLHKTDIDEVPTALMAFQGRLIAGVGKALRLYDIGKKKL 1002

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            LR    R+  +          + + T+G  I+ GD+ +SI  + YK  E  +   A D +
Sbjct: 1003 LRKAENRQFATAI--------VTLSTQGSRILAGDINQSIYYVAYKAAENRLLIFADDTS 1054

Query: 596  ANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATDEERG---------------RL 637
            A W++A  +LD +  + A+   N+F  R +   S+   D+  G               + 
Sbjct: 1055 ARWITASTMLDYNTVVAADKFGNVFVNRLDEAVSKQVDDDPTGAGILHEKSVLMGAPHKT 1114

Query: 638  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLE 696
            +++  +H+G+ +   +  +LV        G    V++  ++G IG++  L   +   F+ 
Sbjct: 1115 KMLTHFHVGDVITSIQRVALV-------AGAREVVVYFGLHGTIGILVPLVTKDDVDFIS 1167

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             L+ ++R     + G +H  WR +    K       +DGDL E F  L   +   I+  +
Sbjct: 1168 TLEQHMRTENLSLVGRDHLSWRGYYTPVKAT-----VDGDLCEYFAKLPTQKQLAIAGEL 1222

Query: 757  NVSVEELCKRVEEL 770
            + +V ++ K++E L
Sbjct: 1223 DRTVGDVLKKLESL 1236


>gi|346327528|gb|EGX97124.1| pre-mRNA splicing factor RSE1 [Cordyceps militaris CM01]
          Length = 1206

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 194/802 (24%), Positives = 356/802 (44%), Gaps = 83/802 (10%)

Query: 34   LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLR 92
            + P++D  V +L  +   Q+ T  G     + R +++G+ +NE  + EL G+   +W+L+
Sbjct: 417  MNPLLDCKVANLTGEDAPQIFTICGNGARSTFRTLKHGLEVNEIVASELPGVPSAVWTLK 476

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
             ++D+ +D ++V+SF + T +L++   + +EE    GF +   T+       + L+QV  
Sbjct: 477  LNSDEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTIAAQLLGTDGLIQVHP 534

Query: 153  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKH 211
              +R + + +    NEW +P   S+  A+ N+ QV +A   G +VY E+  DG L E   
Sbjct: 535  RGIRHIRNGNV---NEWSAPQHRSIVAASTNSHQVAIALSSGEIVYFEMDSDGSLAEYDE 591

Query: 212  AQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
             +  +  ++ L +  + E    S   AVG   D +VRI SL P+  L  K        P 
Sbjct: 592  KKEMFGTVTALSLGEVPEGRVRSSFLAVGC-DDSTVRILSLDPESTLENKSVQALTAAPT 650

Query: 270  SVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS 323
            S+ +   +  S      YL   L  G  L  +L+  TGELTD ++  LG +P+ L   + 
Sbjct: 651  SLAIIPMDDSSSGGSTLYLHIGLHSGVYLRTVLDEITGELTDTRQKFLGPKPVRLFQVTV 710

Query: 324  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM-----CPFNSAAFPDSLAIAKEGE 378
               T V   S RP + Y++    + S+  +  +S++       F+S    D +   +   
Sbjct: 711  GGRTCVLGLSSRPWLGYANP---ITSSFEITPLSYVDLEWGWNFSSEQCEDGVVGIQGQS 767

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV----- 432
            L I +ID + + L   SIPL   P++         F      N +   + +   +     
Sbjct: 768  LRIFSIDRLGETLLQSSIPLTYTPKKFVKHPDEPLFYTIEADNHTLPPDLQAKLLADPAA 827

Query: 433  -----RLLDDQTF----------------EFISTYP-------LDTFEYGCSILSCSF-S 463
                 ++L  + F                + +S  P        +  E   S+   SF S
Sbjct: 828  VNGDAKVLPPEDFGHPRGNRRWASCISVVDPVSEEPSVLQRVDFENNEAAVSVAVVSFAS 887

Query: 464  DDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGK 520
             D+  +  VGT   ++      ++  I ++  + G  +L+ I + + +    +L  F GK
Sbjct: 888  QDNESFLVVGTGKDIVLNPRSSSEAYIYIYRFQQGGRELEFIHKTKIEEPATALLPFQGK 947

Query: 521  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 580
            LLA I + +++Y   +R    R+ Q+E      I++L   T+G  IVV D+ + ++L++Y
Sbjct: 948  LLAGIGKTLRMYDLGMR-QLLRKAQAEVVPQ-QIVSL--NTQGSRIVVSDVQQGVTLVVY 1003

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGA--TDEERGRLE 638
            K     +     D  A W +   ++D +   G +   N+F VR  ++ +   DE+   L 
Sbjct: 1004 KSASNKLIPFVDDSIARWSTCTTMVDYESVAGGDKFGNMFIVRSPAKASEEADEDAAGLH 1063

Query: 639  VV-------GEYHLGEFVNRFRHGSLVMRLPDSD--VGQIPTVIFGTVNGVIGV-IASLP 688
            +V       G  H  E +  F    ++  +  +   VG    +++  + G IGV I  + 
Sbjct: 1064 LVNARDYLHGTQHRLELMCHFFTQDILTSINKTGLVVGGQDVLLWSGIMGTIGVFIPFVS 1123

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
             E   F + L+ +LR     + G +H  +RS+    K V     +DGDL E F  L   +
Sbjct: 1124 REDTDFFQSLEQHLRTEDGPLAGRDHLMYRSYYAPVKGV-----IDGDLCERFSILPNDK 1178

Query: 749  MDEISKTMNVSVEELCKRVEEL 770
               I+  ++ SV E+ +++ ++
Sbjct: 1179 KQMIAGELDRSVREIERKISDI 1200


>gi|17508021|ref|NP_491953.1| Protein TEG-4 [Caenorhabditis elegans]
 gi|351060889|emb|CCD68627.1| Protein TEG-4 [Caenorhabditis elegans]
          Length = 1220

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 193/834 (23%), Positives = 361/834 (43%), Gaps = 118/834 (14%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L P+ D  + D+ R+   Q+ +  G     SL+++RNG+ I+E A  +L G    +W++
Sbjct: 403  SLSPLTDAVIGDIAREDAAQIYSLVGRGARSSLKVLRNGLEISEMAVSDLPGNPNAVWTV 462

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + +D +D+++VVSF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ 
Sbjct: 463  KKNIEDQYDSYIVVSFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCAMIGDDSLVQIY 520

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
            S  +R + +  R   NEWK+PP   +     N  QV +A  GG LVY E+  +G L E  
Sbjct: 521  SEGIRHIRADKR--INEWKAPPRRQIVKCAVNRRQVAVALTGGELVYFELDLNGTLNEFT 578

Query: 211  HAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
              +L   +I+C+  + I E    S+  A+G   D +VRI SL P+  L+          P
Sbjct: 579  ERKLFNADIACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQSLPCPP 637

Query: 269  RSVLLCAF-----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
             S+LL        +G++  +L   L +G L    ++  TG + D +   LGT+P+ L   
Sbjct: 638  ESILLIDTPNEDGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKV 697

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
              +  + +   S R  ++Y   ++   + ++   + +   F S    + +       L I
Sbjct: 698  QCQGRSAILCTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCSEGIVAISASTLRI 757

Query: 382  ------GTIDDIQKLHIRSIP--LGEHPRRIC-----HQEQSRTFAICSLKNQSCAEESE 428
                  G   ++Q    +  P  +  HP   C         S T    ++K    A + E
Sbjct: 758  IAAEKLGVAFNVQSFEHKMTPRRVAVHPSMPCLIVIETDHASYTEVTKNIKRNQMAADVE 817

Query: 429  MHFVRLLDDQTFEFIST----YPLDTFEYGC------------SILSCSFSDDSNVY--- 469
                   + Q  + I+T      LD   YG             S++S +  D  + +   
Sbjct: 818  AMASDETEAQLAQEIATNLRERRLDERVYGAPRAARGKWASAISLISATSGDKLSYFELP 877

Query: 470  -----YCVGTAYVLPEENE--------------------------PTKGRILVF-IVEDG 497
                  CV         NE                          PT+G +  F +  +G
Sbjct: 878  QDENAKCVALVQFSKHPNEAMVLVGCGVNEVLNVHDIDPNDTSIRPTRGCVYTFHLSANG 937

Query: 498  -KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 556
             +   +   ET   V +++ F G  L    + +++Y     D G ++L ++C +    ++
Sbjct: 938  DRFDFLHRTETPLPVGAIHDFRGMALVGFGRFLRMY-----DIGQKKLLAKCENKNFPVS 992

Query: 557  LY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            +  +Q+ G  I+V D  +S+  L Y+  +  +   A D    +++ V +LD      A+ 
Sbjct: 993  IVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVTCVCVLDYHTVAVADK 1052

Query: 616  NFNLFTVR---KNSEGATDE--------ERG-------RLEVVGEYHLGEFVNRFRHGSL 657
              NL  VR   + +E   D+        +RG       ++E+V  + +G+ +   +  SL
Sbjct: 1053 FGNLAVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVSNFFIGDTITSLQKTSL 1112

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
               +P    G    +++ T+ G IG + S +  ++  F   L+ ++R     + G +H  
Sbjct: 1113 ---MP----GANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMHVRSEYPPLCGRDHLA 1165

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+    K+V     +DGD+ E F  +   +  ++++ +  +V E+ K++E++
Sbjct: 1166 YRSYYAPCKSV-----IDGDICEQFSLMDTQKQKDVAEELGKTVSEISKKLEDI 1214


>gi|407919154|gb|EKG12409.1| Cleavage/polyadenylation specificity factor A subunit [Macrophomina
            phaseolina MS6]
          Length = 1210

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 200/849 (23%), Positives = 358/849 (42%), Gaps = 109/849 (12%)

Query: 10   QLIKLNLQPDAKGSY------------VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCS 57
            + I  N  P+    Y            + + +   ++ P +   V +L      Q+ T  
Sbjct: 384  EFISDNFSPEPDAPYEPVFFHPRGAENISLAQSVPSMNPTLGCKVANLTDDDAPQIYTVC 443

Query: 58   GAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAM 116
            G     + + + +G+ ++E    EL  + + +W+ +  T D +D ++++SF + T +L++
Sbjct: 444  GTGARSTFKTLTHGLEVSEIVESELPSVPEAVWTTKIRTGDEYDAYIILSFSNGTLVLSI 503

Query: 117  NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
               + +EE    GF S T+TL       + L+QV    +R + +  R   NEW +P   +
Sbjct: 504  G--ETVEEVTDTGFLSSTRTLAVQLLGEDALIQVHPKGIRHIQAGGR--INEWPAPQHRT 559

Query: 177  VNVATANASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQ 234
            +  AT N  QV +A   G +VY E+  DG L E  +  ++   ++CL +  + E    S 
Sbjct: 560  IVAATTNERQVAVALSSGEIVYFEMDVDGSLAEYDEKKEMSGTVTCLSLGEVPEGRVRSS 619

Query: 235  IAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALG 287
              AVG   D +VRI SL PD  L  K        P ++ + A    S      YL   L 
Sbjct: 620  FLAVGC-DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMAMADSSSGGSTLYLHIGLY 678

Query: 288  DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKK 345
             G  L  +++  TGELTD +   LG + + L   + ++ + + A S R  + YS    K 
Sbjct: 679  SGVYLRTVIDEITGELTDTRTRFLGAKGVKLFRVTVQDQSAILATSSRSWLGYSDQQTKA 738

Query: 346  LLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRI 404
               + +    +     FNS      +   +   L I TI+++   L   +IPL   PR +
Sbjct: 739  FTLTPLAYAPLEWGWSFNSEQCTQGMVGIQGQHLRIFTIENLSNNLLFENIPLMYTPRNL 798

Query: 405  CHQEQSRTFAICSLKNQSCAEESEMHFV----------RLLDDQTF-------------- 440
                    F +    N   A  +    +          ++L  + F              
Sbjct: 799  VRHPTEPLFYVIESDNGVLASSTRQQLLNDPAAVNGDAKILPPEEFGYPRAEGHWASCIQ 858

Query: 441  --------EFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA---YVLPEENEPTKGR 488
                    E + T  L+  E   S+    F S +   +  VGTA    V P       G 
Sbjct: 859  VVDPISSKEVVHTLELEENESAVSVCLAPFTSQNDETFLVVGTAKDLVVAPRSY--NCGY 916

Query: 489  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
            + ++ + E+G+ L+ I + + +    +L  F GKLL  +   ++LY     D G R+L  
Sbjct: 917  VHIYRLQENGRELEFIHKTKMEAPPMALLPFQGKLLVGVEADLRLY-----DLGLRQLLR 971

Query: 547  ECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
            +      +  + + +QT+G  IV  D+ +S++ ++YKH E  + +   D    W S   +
Sbjct: 972  KAQALNVVPNILIGLQTQGSRIVCSDVQESVTYVVYKHLENRLIQFCDDSIHRWTSCTAM 1031

Query: 605  LDDDIYLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLG 646
            +D +   G +   N++ VR   K SE A +E  G               RL+++  ++  
Sbjct: 1032 VDYETTAGGDKFGNIWLVRCPPKASEEADEEGSGLHLINERPYLQGTPNRLDLLAHFYTQ 1091

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKV 705
            +     +  +LV        G    +++  + G +G+ I  +  E   F + L+  LR  
Sbjct: 1092 DIPTSIQKTALV-------AGGRELLLWSGLQGTLGIFIPFVSREDVDFFQSLEQQLRTE 1144

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
               + G +H  +RS+      V  K  +DGDL E FL L R + + I+  ++ SV E+ +
Sbjct: 1145 DPPIAGRDHLAYRSY-----YVPVKGVIDGDLCERFLRLPRDKKETIAAELDRSVREVER 1199

Query: 766  RV-EELTRL 773
            ++ ++ TR 
Sbjct: 1200 KIGDQRTRF 1208


>gi|134113697|ref|XP_774433.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50257071|gb|EAL19786.1| hypothetical protein CNBG0790 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1276

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 195/767 (25%), Positives = 353/767 (46%), Gaps = 76/767 (9%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQG 84
            E+LER++N+ P+ D CVV  E      +V  SGA +  SLR+VR+G+G+ E  +++ L  
Sbjct: 492  EILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQGLHD 551

Query: 85   IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 144
            ++ MW L  ST  P    L++S  + T  + + L+ E+    I      ++TL       
Sbjct: 552  VQKMWPLTDSTAIPR---LLLS--TSTSTILLQLQPEISAIPITDVIFNSETLAAGILPG 606

Query: 145  NQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
             +L+ QVT   + L S  S  +L  + +      +  A   A   ++A  GG LV   + 
Sbjct: 607  AELLAQVTPRGLSLWSDLSVGQLEAQVEVDKETEIVCAQVTADWAVVAKKGGSLVVFHVS 666

Query: 203  DGILTEVKHAQLEYEISCLDINPIGENP-------SYSQIAAVGMWTDISVRIFSLPDLN 255
            +   +      ++ E+S + I+    +        +++    V M + IS  +  L    
Sbjct: 667  NTGFSPQGTIDVKEEVSAVAISSSSGSSSPIIVISTWTAKTFVYMLSQISNGVDGLS--- 723

Query: 256  LITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM-KTGE-----LTDRKKV 309
             I  E     +  RS   C   G   LL  L +G L  + LN  ++GE     +   K  
Sbjct: 724  -IQSESSATSLQLRSHPFCP--GGIQLLSGLDNGLLHIYDLNTSESGEAEGLTVKSSKTT 780

Query: 310  SLGTQPITLRTFSSKNTTHVFAA---SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            SLG +P+ L    S +      +   ++R +VI+ S  ++ +S+VN+K V      ++++
Sbjct: 781  SLGLRPLVLHPCESTHGDEKVISVGLTERMSVIFESKDRIEFSSVNIKNVMAATSVDTSS 840

Query: 367  FPDSLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC-- 423
             P     ++   L++  ++ ++KLH+++   G E   ++ + ++ +  A  S +      
Sbjct: 841  GPVFALFSRTSGLSLVKVNSLKKLHVQTCDTGNESISKLTYMDEYKAIACGSTRRTQLRD 900

Query: 424  AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 483
             +  E +FV++ D  + E +S++ L   E   S+ S   +    +Y  VGTA++ P++ E
Sbjct: 901  GDVKEENFVQIRDGTSLEPLSSFSLRGRELVTSLRSVFLT--GRIYLAVGTAFLPPDDGE 958

Query: 484  PT-----------KGRILVFIVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAIN 526
             +           +GR+L+   ++G       +++ AE  T GAVY+L   +G L  A  
Sbjct: 959  DSSWDEGNLAVVREGRVLLLEFKEGDAGGGWDIKIKAELATVGAVYALEEIHGFLAVAAG 1018

Query: 527  QKIQLYKWMLRDDGTRELQ-SECGHHGHILAL-------YVQTRGDFIVVGDLMKSISLL 578
             K+ +++    D    EL+ +      ++++        +++  G  IV GD M+S+ +L
Sbjct: 1019 SKLTIHR---LDHNPVELEETSSWASAYVISSLSVLPPSHIRPEGALIV-GDGMRSVIVL 1074

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERGR 636
                 +G I +  R+   + ++A+ +L D  D  + ++   NL T R N          +
Sbjct: 1075 NVDEGDGMIYDDERNMATHGVTALGLLKDKGDGVVISDAYSNLLTYRLNQ---------K 1125

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLE 696
            LE    + L E V RF+ GSLV      ++  IP V+F T  G +G+I  L       L+
Sbjct: 1126 LERAATFGLHEEVTRFQSGSLVPTTTAPEI-IIPDVLFATREGRLGIIGELGTRSSRTLD 1184

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
             LQ N+ K+ KG G +    WR   +     D   F+DGD ++ FLD
Sbjct: 1185 DLQRNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAGFVDGDFVQKFLD 1231


>gi|225680146|gb|EEH18430.1| DNA damage-binding protein [Paracoccidioides brasiliensis Pb03]
          Length = 1138

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 247/497 (49%), Gaps = 41/497 (8%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDL-----ERQ------GQGQVVTCSG 58
           QLI++      +GS+ E+++ + N+ PI+DF ++DL     E Q      GQ ++VT SG
Sbjct: 425 QLIRIT-----EGSF-EIIQTFSNIAPILDFTIMDLGGRAGENQTHDFSSGQARIVTGSG 478

Query: 59  AYKDGSLRIVRNGIGINEQASV-ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
           A+ DGSLR VR+G+G+ E   +  ++ I  +W+LR +  + F   L+VSF+ ETR+    
Sbjct: 479 AFDDGSLRSVRSGVGMEEVGVLGAMEHITDLWALRVACQEGFSDTLLVSFVDETRVFHFT 538

Query: 118 LEDELEET-EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
            + E+EE  E  G      TL   +    +++QVT  +VR+       L   W  P   +
Sbjct: 539 QDGEVEEKDEFMGLGLAESTLLAANLPNGRILQVTERNVRVADLDDGMLLWNWSPPSQKA 598

Query: 177 VNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
           +  A++N   ++L  GG  L+  +I G+  L   K    + ++S + +     +P+   I
Sbjct: 599 ITAASSNDDHLVLVVGGQVLMCFDIQGEVKLAGKKDFGDDTQVSGVTVT---SSPATYCI 655

Query: 236 AAVGMWTDISVRIFSLPDLNLITKEHLG--GEIIPRSVLLCAF--EGISYLLCALGDGHL 291
             +    ++ V   +L D+ +     +G  GE  PRSVL+        + L  ++ DG +
Sbjct: 656 LCLPQTAEVVV--MNLEDMTIRHSTSVGEPGEAFPRSVLVAEVLPNQPATLFVSMADGRV 713

Query: 292 LNFLLNMKTGELTDRKKVSLGT-QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
            +F  N     L    K+ LG+ QP   +        ++FA  ++P++IY++  +++YS 
Sbjct: 714 FSFSFNADEFTLKKMSKLVLGSEQPSFKKLPRGDGLYNIFATCEQPSLIYATEGRIIYSA 773

Query: 351 VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQS 410
           V+  + S +C FNS A+P S+A+A   EL I  +D  +   I ++ + E  RR+ +    
Sbjct: 774 VHSDQASRICHFNSEAYPGSIALATPTELKIAHVDSERTTQIHTLEIDETVRRVAYSAAE 833

Query: 411 RTFAICSLKN--QSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DS 466
           + F I ++K   ++ AE     F+ L D+  F  +  Y L   E   S++   F +  DS
Sbjct: 834 KAFGIGTIKRTLENGAEVITSRFM-LADEIMFRELDDYSLRPDELVESVIQAQFPEGKDS 892

Query: 467 NV------YYCVGTAYV 477
           N        + VGT+Y+
Sbjct: 893 NGNESFKDIFVVGTSYL 909



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 14/231 (6%)

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEG----AIEERARDYNANWMSAVEILDDDIYLGA 613
            Y+   G+ I V DLMKS+S++ +K  E     ++ E AR +   W +AV  + ++++L +
Sbjct: 908  YLDDVGNLIAVADLMKSVSIIEFKQGENDQPDSLTEVARHFQTLWSTAVAPIAENMFLES 967

Query: 614  ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---P 670
            +   NL  + +N  G TD+++ RLEV  E  LGE VNR R  S+   LP +   +    P
Sbjct: 968  DAEGNLVVLNRNVNGVTDDDKRRLEVTSEILLGEMVNRIRPVSIQGSLPATGPREAVISP 1027

Query: 671  TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE-KKTVDA 729
                GTV G I +   +       L +LQ+ +  ++   G +   ++R+F N  ++  + 
Sbjct: 1028 KAFLGTVEGSIYLFGLINPAYQDLLMRLQSAMAGLVVTPGAMPFNKFRAFKNAVRQAEEP 1087

Query: 730  KNFLDGDLIESFLDLSRTRMDEI------SKTMNVSVEELCKRVEELTRLH 774
              F+DG+LIE F        +EI          +V+VE++ + VEEL R+H
Sbjct: 1088 YRFVDGELIERFWTCETALQEEIVGLVVAGGVADVTVEKVKRIVEELRRMH 1138


>gi|443918546|gb|ELU38987.1| CPSF A subunit region domain-containing protein [Rhizoctonia solani
            AG-1 IA]
          Length = 1037

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 201/778 (25%), Positives = 329/778 (42%), Gaps = 84/778 (10%)

Query: 17   QPDAKGSYVEVL-ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QPD + +++EV+ E   NL PI+D  +V+++  GQ ++   SG    G L +V  G    
Sbjct: 273  QPDDETTHLEVIVEHNKNLAPILDATLVEIDGSGQPRIALISGDESGGWLSVVHKGASFR 332

Query: 76   EQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE----LEETEIEGF 130
            E A ++  G ++ ++ L+   D+   ++LV S  + T IL+  L D     L   E+ G 
Sbjct: 333  ELAILDGLGHLENIFPLKKYFDERTHSYLVASTTTSTYILS--LADSSISLLSREELSGI 390

Query: 131  CSQTQTLFCHDAI---YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA-TANASQ 186
                 T+   +      +  + VT   + L+   +    + WK P G     A   ++S 
Sbjct: 391  SRSETTILASNVPLGGVDAAIHVTPQKIVLIDIITGRAISSWKPPKGDITAAALDTSSST 450

Query: 187  VLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISV 246
            + +AT  GHL  L I    L +    +  ++IS L IN        + I A   W    V
Sbjct: 451  ICVATSEGHLFSLNIQSAGLLQT--GKPHWQISSLAIN--------AGIVAAAFWGSNEV 500

Query: 247  RIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYL--LCA--LGDGHLLNFLLNMKTGE 302
            +IF LP L  +  E +  E    SV+  +  GI  +   CA    + +  +++      +
Sbjct: 501  QIFLLPGLKRV-GESVIQEPSAASVVYLSNFGIPNVPDRCAPRWSNCYTSDYIQGRTRAQ 559

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR---PTVIYSSNKKLLYSNVNLKEVSHM 359
                        P   R+ S  + +  F  S      T   S   K    +V +  +   
Sbjct: 560  YA-------ACSPTGCRSCSYHDGSRAFRGSGHRCWETFNGSFGCKQAPFSVLVAPIGEQ 612

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTID---DIQKLHIRSIPLGEHPRRICHQEQSRTFAIC 416
                S  F D     K G + IG      D Q L  +     + P  + H E+   +AI 
Sbjct: 613  NGHQSKCFSD----IKSGCMRIGGSQRTWDSQYLFYQYNLGSDTPLCLAHHEELSKYAIG 668

Query: 417  SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY 476
             ++ ++   E E HFVR  DD TF+ +  Y L   E   SI    ++   N Y   GTA 
Sbjct: 669  CVRPRTDVLE-ERHFVRFHDDSTFKDLGQYKLKYSEMVTSI--GVYTHGGNSYILAGTAI 725

Query: 477  VLPEENEPTKGRILVFIV-EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            + P ENEP  GRI++F   E+  ++  A K+ +G V S+     +++AAI   I LY  +
Sbjct: 726  INPGENEPLAGRIILFGQDEENMIKFKASKDVEGGVSSIKQLGARIIAAIGHGIYLYN-L 784

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA--------- 586
             R + T          G+I+   +  R + IVV D ++S+S+L +               
Sbjct: 785  GRGEVTISDPVARWERGYIVHDII-VRPNMIVVSDRLRSVSVLRFIERTSTPESHEEIET 843

Query: 587  --------IEERARDYNANWMSAVEIL-DDDIYLGAENNFNLFTVRKNSEGATDEERGRL 637
                     E  A D +A W ++VE+L D+   + ++ + N+ T         + E G L
Sbjct: 844  EEDSTILQFETVAMDMHAVWPTSVEVLPDNKTIIASQTDGNILT--------WELEDGNL 895

Query: 638  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 697
            E    +H GE +++F     +     S  G     IF T  G IG ++++     L L +
Sbjct: 896  EPRAAFHTGEIIHKF-----IASTAKSSAGPRTVAIFVTNTGRIGTLSTVDDADALQLTR 950

Query: 698  LQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
            L+  L   IKG+G + H +WR+    +   K    +   DGD I+ FL+LS      I
Sbjct: 951  LEMKLGDAIKGLGNIKHPEWRAPKLLHTGTKPPPRRGVTDGDFIKKFLELSSEEAKRI 1008


>gi|358391805|gb|EHK41209.1| hypothetical protein TRIATDRAFT_135379 [Trichoderma atroviride IMI
            206040]
          Length = 1212

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 199/833 (23%), Positives = 355/833 (42%), Gaps = 103/833 (12%)

Query: 19   DAKGSYVEV------------LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 66
            DA+ SY  V            +E   ++ P++D  + +L  +   Q+ T  G     + R
Sbjct: 396  DAQASYTPVYFYPRPLENLVLVESIPSMNPLLDCKIANLTGEDAPQIYTVCGNGARSTFR 455

Query: 67   IVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 125
             +++G+ INE  S EL GI   +W+L+ +  + +D ++V+SF + T +L++   + +EE 
Sbjct: 456  TLKHGLEINEIVSSELPGIPSAVWTLKLNRSEQYDAYIVLSFTNGTLVLSIG--ETVEEV 513

Query: 126  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 185
               GF +   TL       + L+QV    +R + +      N+W +P   S+  A+ NA 
Sbjct: 514  SDSGFLTSVPTLAAQLLGDDGLIQVHPKGIRHIRNGQV---NQWDAPQHRSIVAASTNAH 570

Query: 186  QVLLATGGGHLVYLEI-GDGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTD 243
            QV +A   G +VY E+  DG L E    +  +  ++CL +  + E    S   AVG   D
Sbjct: 571  QVAIALSSGEIVYFEMDDDGSLAEYDDKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DD 629

Query: 244  ISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLL 296
             +VRI SL P+  L  K        P S+ + + E  S      YL   L  G  L  +L
Sbjct: 630  CTVRILSLDPESTLENKSVQALTAAPTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVL 689

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLK 354
            +  TGELTD ++  LG + + L   + +  T V   S RP + Y+    K  + + ++  
Sbjct: 690  DEVTGELTDTRQKFLGPKQVRLFQVTVQGRTCVLGLSSRPWLGYADPITKSFVVTPLSYV 749

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTF 413
            ++     F S    + +   +   L I ++D +    I+ SIPL   P+++    +   F
Sbjct: 750  DLEWGWNFTSEQCEEGIVGIQGQTLRIFSVDRLGDTLIQNSIPLTYTPKKMVKHPEHPLF 809

Query: 414  AICSLKNQSCAEESEMHFV----------RLLDDQTF----------------------- 440
             +    N + + +     +          ++L  + F                       
Sbjct: 810  YVIEADNHTLSPDLCAKLLADPARVNGDAKVLSPEEFGHPRGNRRWASCISVVDPLAEDG 869

Query: 441  EFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA---YVLPEENEPTKGRILVFIVED 496
            + +    LD  E   S+   +F S D+  +  VGT     V P         I  F  E 
Sbjct: 870  QALQKIDLDENEAAVSLAIVTFASQDNETFLVVGTGKDMVVNPRSFSDAYVHIYRFEQEG 929

Query: 497  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 556
              L  I + + +    ++  F G++L  I + +++Y   +R    R+ Q+E       L 
Sbjct: 930  RGLVFIHKTKVEEPPMAIIPFQGRVLVGIGKILRIYDLGMR-QLLRKTQAEVAPQ---LI 985

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
              + T+G+ I+VGD+ + I+ ++YK     +     D  A W +   ++D +   G +  
Sbjct: 986  NSLSTQGNRIIVGDVQQGITYVVYKQTTNKLIPFVDDTVARWTTCSTMVDYETVAGGDKF 1045

Query: 617  FNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNRFRHGSLV 658
             N+F VR   K SE A +E+ G               RL+++   +  +        SLV
Sbjct: 1046 GNIFVVRSPQKASEEADEEQAGLHLLNARDYLHGRSHRLDLMCHLYTQDIPTSITKTSLV 1105

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                   VG    +++  + G IGV I  +  E   F + L+ +LR     + G +H  +
Sbjct: 1106 -------VGGQDVLLWSGLMGTIGVLIPFVTREDTDFFQSLELHLRAEDPPLAGRDHLMY 1158

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            RS+    K V     +DGDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1159 RSYYAPVKGV-----IDGDLCERYTLLPNDKKQMIAAELDRSVREIERKISDI 1206


>gi|401407861|ref|XP_003883379.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
 gi|325117796|emb|CBZ53347.1| putative Splicing factor 3B subunit 3 [Neospora caninum Liverpool]
          Length = 1233

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 199/852 (23%), Positives = 335/852 (39%), Gaps = 138/852 (16%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI D  V+D +  G  QV    G     +LRI+++G+G+ E A  EL G  + +W+ 
Sbjct: 401  SLSPITDLKVLDAQGTGAPQVYVLCGKGPRSALRILQHGLGVEEMADNELPGRARAVWTT 460

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S    FD +++V+F  E   L + + D +EE     F +   +L       +  +QV 
Sbjct: 461  KLSHQSAFDGYIIVAF--EGSSLVLQIGDTVEEVTDSLFLTNVSSLLVALMYDDSFIQVH 518

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK 210
               +R +  + R   NEW++P G  +  A AN  Q++++  GG L+  E+ +   L E  
Sbjct: 519  ETGIRHILKSKRV--NEWRTPGGRRIKAADANERQLVISLAGGELILFEVDESHTLVETA 576

Query: 211  HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNL--ITKEHLGGEII 267
               +  E +C+ +  I +    +   AVG   D  VRI SL  D NL  +  + L     
Sbjct: 577  RRNINVETTCMSMQAIPKGRLRASFLAVG-GLDNMVRILSLEKDRNLRQLATQLLPNNAT 635

Query: 268  PRSVLLCAFEGIS---------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
            P SV L    G+                YL   L  G ++  +++   G L D++   LG
Sbjct: 636  PESVCLATLTGLGAHGKDAGKSEDNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLG 695

Query: 313  TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
             + +     + +    + A S++  + Y+   KL  + +N   +  +  F S    D   
Sbjct: 696  GRAVRFHAVTLQGQPAILALSEKSWLCYTFQHKLHCTPLNYDPLECVASFCSEQCTDGFV 755

Query: 373  IAKEGELTIGTIDDIQKLHIRS-IPLGEHPRRICH--------------------QEQSR 411
                G L I     + +   ++ +PL   PR +                        ++ 
Sbjct: 756  AIAGGSLRIFRCQRLGETFSQTLLPLSFTPRAMAALPHISATESQGAVDAAGVGPSRRAA 815

Query: 412  TFAICSLKNQSCAEESEMHFVRLL----------------DDQTFEFISTYPLDTFEYGC 455
              AI    + +  E ++    R L                DD   E    + L   +YG 
Sbjct: 816  ALAIVEADHNAYDESTKAEIRRALRGIKVNQEEEEEKEETDDMQLEEKEQHDLPEDQYGT 875

Query: 456  ---------------------SILSCSFSDDSNVYYC------------VGT--AYVLPE 480
                                 +I   S   D     C            VGT  A  L  
Sbjct: 876  FKAGPGKWGSCIRIVNPLMAMTIDKVSLETDEAALSCCYCEMEGLPLLVVGTVTAMTLKP 935

Query: 481  ENEPTKGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
               P +  I VF  +D   L L+     +    +L  F G LLA +  K++LY       
Sbjct: 936  RKVP-QASIKVFSYDDKFSLNLVHSTPVEDYPMALAPFRGMLLAGVGHKLRLYAL----- 989

Query: 540  GTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            G + L  +C +      + +++  GD + VGDL +S+ ++ Y+  E      A D    W
Sbjct: 990  GKKRLLKKCEYKNLPCGVAFIRVAGDRLFVGDLRESVHVMRYRLSENLFYVLADDVVPRW 1049

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE--------ERG----------RLEVV 640
            ++  E+LD   ++ A+   ++F  R  SE   DE         RG          +L+ +
Sbjct: 1050 LTKGEVLDYHTFVAADKFDSVFICRVPSEAKQDELGDTTGLRLRGDTTYLTDKCFKLQSL 1109

Query: 641  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL--PHEQYLFLEKL 698
              +H+GE V      +L         G   ++I+GT+ G IG  +     HE  LF   L
Sbjct: 1110 LHFHIGEVVTALERATLT-------AGASESIIYGTIMGSIGAFSPFLTKHELDLFTH-L 1161

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            +  LR     +GG  H  +RS+ +      AKN +DGDL ES+  L       I++    
Sbjct: 1162 EMVLRSEKPPLGGREHIMFRSYYHP-----AKNTVDGDLCESYALLPYDVQKRIAQDFEK 1216

Query: 759  SVEELCKRVEEL 770
            +  ++ K +E++
Sbjct: 1217 TPADILKHLEDI 1228


>gi|357147370|ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
            distachyon]
          Length = 1228

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 204/851 (23%), Positives = 355/851 (41%), Gaps = 119/851 (13%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP A  + V + E   +L PI+D  + +L  +   QV T  G     ++RI+R G+ I+
Sbjct: 396  FQPRALKNLVRIDE-IESLMPIMDMRIANLFDEETPQVYTACGRGSRSTMRILRPGLAIS 454

Query: 76   EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 455  EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTT 512

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 513  HSLAVSLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 570

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI SL P
Sbjct: 571  ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDP 629

Query: 253  DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 300
            D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 630  DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 689

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            G+L+D +   LG +P  L      +   +   S RP + Y      L + ++   +    
Sbjct: 690  GQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAA 749

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHP------------------ 401
             F+S    + +       L I TI+ + +  +  +IPL   P                  
Sbjct: 750  SFSSDQCSEGVVAVAGDALRIFTIERLGETFNETAIPLRYTPRKFVILPKKKYLAVIESD 809

Query: 402  ------------RRICHQ-------------------------EQSRTFAICSLKNQSCA 424
                        +R C +                         E+S T            
Sbjct: 810  KGAFSAEQREAAKRECLEASGAVENGNGNGDQMENGDGQEDGAEESNTLPDEQYGYPKAE 869

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EE 481
             E  +  +R+LD ++ +      L   E   SI + +F D +      VGT   L    +
Sbjct: 870  SEKWVSCIRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGLQFWPK 929

Query: 482  NEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
                 G I ++  V++GK L+L+ + + +    SL  F G+LLA +   ++LY     D 
Sbjct: 930  RSLASGFIHIYKFVDEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DL 984

Query: 540  GTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            G R+L  +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W
Sbjct: 985  GKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRW 1044

Query: 599  MSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVV 640
            ++A   +D D   GA+   N++  R                  K  +G  +    ++E +
Sbjct: 1045 LTAANHIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEI 1104

Query: 641  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQ 699
             ++H+G+ V   +  SL+        G    +I+GTV G +G ++A    E   F   L+
Sbjct: 1105 VQFHVGDVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLE 1157

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +LR+    + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +
Sbjct: 1158 MHLRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRT 1212

Query: 760  VEELCKRVEEL 770
              E+ K++E++
Sbjct: 1213 PGEILKKLEDI 1223


>gi|116207186|ref|XP_001229402.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88183483|gb|EAQ90951.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 1211

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 202/813 (24%), Positives = 356/813 (43%), Gaps = 92/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P++D  + +L  +   Q+ T  G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESMDSMNPLIDCKIANLTGEDAPQIYTVCGNRARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   G-MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 476  AAVWTTKLTKYDEYDGYIVLSFTNATLVLSIG--ETVEEVTESGFLTSVPTLAVQQLGEE 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  A  N +QV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P S+L+ A E    G++ YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 650  ALTSAPSSLLVMAMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S +N   V A S RP + Y+    K    + +   E+     F+S    + +    
Sbjct: 710  LFQVSVQNQPCVLALSSRPWLGYTDPITKNFSMTPLIYSELEFGWNFSSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN------------Q 421
               L I TI+ +    I +SIPL   P+R+  H EQ   + I S  N            Q
Sbjct: 770  ANFLRIFTIERLGDTMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELRAQLLEQ 829

Query: 422  SCAEESEMHFVRLLD-----------------DQTFEFISTYPLDTFEYGCSILSCSF-- 462
            S A   +   +   D                 D   E  S      FE   + +S +   
Sbjct: 830  SGAVNGDAAILPPEDFGYPRATGRWASCISVVDPLGEEPSVLQRIDFEGNEAAVSAAVVP 889

Query: 463  --SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
              S +   +  VGT   ++    + ++G I V+   EDG+ L+ I + + +    +L  F
Sbjct: 890  FSSQEGESFLIVGTGKDMVLNPRKFSEGYIHVYRFHEDGRDLEFIHKTKVEEPPMALIPF 949

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
             G+LLA I + +++Y   LR    + L+   G     L + +QT+G  I+VGD+ + I+ 
Sbjct: 950  QGRLLAGIGKTLRVYDLGLR----QLLRKAQGEVAPQLIVSLQTQGSRIIVGDVQQGITY 1005

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEE---- 633
            ++YK E   +   A D    W +   ++D +   G +   N++ +R  SE A+ E     
Sbjct: 1006 VVYKPESNKLLPFADDTINRWTTCTTMVDYESVAGGDKFGNIWILR-CSERASQESDEPG 1064

Query: 634  ---------------RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                           + RL  +  ++  +        +LV       VG    +++  + 
Sbjct: 1065 SEIQLLHARNYLHGAQSRLSAMAHFYTQDLPTSIVKTNLV-------VGGQDVLVWSGIQ 1117

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +GV I  +  E   F + L++++R     + G +H  +R +      V  K  +DGDL
Sbjct: 1118 GTVGVLIPFVSREDVDFFQNLESHMRAEDPPLAGRDHLIYRGY-----YVPVKGVIDGDL 1172

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1173 CERFSLLPNDKKQMIAGELDRSVREIERKISDI 1205


>gi|358378986|gb|EHK16667.1| hypothetical protein TRIVIDRAFT_40938 [Trichoderma virens Gv29-8]
          Length = 1212

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 195/813 (23%), Positives = 346/813 (42%), Gaps = 91/813 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   ++ P++D  V +L  +   Q+ T  G     + R +++G+ INE  S EL GI 
Sbjct: 416  LVESIPSMNPLLDCKVANLTNEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ +  + +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRTEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGDD 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +      N+W +P   S+  A+ NA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGQV---NQWDAPQHRSIVAASTNAHQVAIALSSGEIVYFEMDDDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F S    + +   
Sbjct: 710  RLFQVTVQGKTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV- 432
            +   L I ++D +    I+ SIPL   P+++        F +    N + A E     + 
Sbjct: 770  QGQTLRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDHPLFYVIEADNHTLAPELCAKLLA 829

Query: 433  ---------RLLDDQTF-----------------------EFISTYPLDTFEYGCSILSC 460
                     ++L  + F                       + +    L+  E   S+   
Sbjct: 830  DPARVNGDTKILPAEEFGHPRGNRRWASCISVVDPLAEDGQVLQRIDLEENEAAVSVAIV 889

Query: 461  SFSDDSN-VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
            +F+   N  +  VGT     V P         I  F  +   L  I + + +    ++  
Sbjct: 890  TFASQENETFLVVGTGKDMVVNPRSFSDAFVHIYRFERDGRGLVFIHKTKVEEPPMAMIP 949

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
            F G++L  I + +++Y   +R    R+ Q+E      I++L   T+G  IVVGD+ + I+
Sbjct: 950  FQGRVLVGIGKTLRIYDLGMR-QLLRKAQAEVAPQ-QIISL--STQGSRIVVGDVQQGIT 1005

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
              +YK     +     D  A W +   ++D +   G +   N+F VR   K SE A +E+
Sbjct: 1006 YAVYKQSTNKLIPFVDDTVARWTTCTTMVDYETVAGGDKFGNIFIVRSPQKASEEADEEQ 1065

Query: 634  RG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
             G               RL+++      +        SLV       VG    +++  + 
Sbjct: 1066 AGLHLLNARDYLHGTSHRLDLMCHLFTQDIPTSIAKTSLV-------VGGQDVLLWSGLM 1118

Query: 679  GVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G IGV I  +  E   F + L+ ++R     + G +H  +RS+         K  +DGDL
Sbjct: 1119 GTIGVLIPFITREDTDFFQSLEQHMRAEDPPLAGRDHLMYRSY-----YAPMKGIIDGDL 1173

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1174 CERYALLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|413935524|gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
          Length = 1229

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 203/851 (23%), Positives = 353/851 (41%), Gaps = 119/851 (13%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP A  + + + E   +L P++D  V +L  +   Q+ T  G     +LRI+R G+ I+
Sbjct: 397  FQPRALKNLMRIDE-IESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAIS 455

Query: 76   EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 456  EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTT 513

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 514  HSLAVTLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 571

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI SL P
Sbjct: 572  ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDP 630

Query: 253  DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 300
            D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 631  DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 690

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            G+L+D +   LG +P  L      +   +   S RP + Y      L + ++   +    
Sbjct: 691  GQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAA 750

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SL 418
             F+S    + +       L I TI+ + +  +  +IPL   PR+     + +  A+  S 
Sbjct: 751  SFSSDQCSEGVVAVAGDALRIFTIERLGETFNETAIPLRYTPRKFVILPKKKYIAVIESD 810

Query: 419  KNQSCAEESEMHFVRLLD---------------------DQTFEFISTYPLDTFEY---- 453
            K    AEE E      LD                         E  +T+P + + Y    
Sbjct: 811  KGAFSAEEREAAKKECLDASGAAENGNANNGDPMENGDGQDGAEEGNTFPDEQYGYPKAE 870

Query: 454  -----------------------------GCSILSCSFSD-DSNVYYCVGTAYVLPEENE 483
                                           SI + +F D +      +GTA  L     
Sbjct: 871  SERWVSCIRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAIGTAKGLQFWPR 930

Query: 484  PTKG----RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD 539
             T       +  F+ E   L+L+ + + +    +L  F G+LLA +   ++LY     D 
Sbjct: 931  RTLAGGFIHVYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DL 985

Query: 540  GTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            G R+L  +C +      L  + T  D I VGD+ +S     Y+ +E  +   A D    W
Sbjct: 986  GKRKLLRKCENKLFPRTLVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRW 1045

Query: 599  MSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVV 640
            ++  + +D D   GA+   N++  R                  K  +G  +    ++E +
Sbjct: 1046 LTTAQHIDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEEI 1105

Query: 641  GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQ 699
             ++H+G+ V   +  SL+        G    +I+GTV G +G ++A    E   F   L+
Sbjct: 1106 VQFHVGDVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLE 1158

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +LR+    + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +
Sbjct: 1159 MHLRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRT 1213

Query: 760  VEELCKRVEEL 770
              E+ K++E++
Sbjct: 1214 PGEILKKLEDI 1224


>gi|350290373|gb|EGZ71587.1| Pre-mRNA-splicing factor rse-1 [Neurospora tetrasperma FGSC 2509]
          Length = 1209

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 202/808 (25%), Positives = 357/808 (44%), Gaps = 84/808 (10%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVQQMGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 650  ALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +    
Sbjct: 710  LFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEE 426
               L I +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+
Sbjct: 770  ANYLRIFSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQ 829

Query: 427  SEMHFVRLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF- 462
                   +L  + F +                IS  P       LD  E   S     F 
Sbjct: 830  QSNGDATVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFA 889

Query: 463  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            S +   +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G
Sbjct: 890  SQEGESFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQG 949

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            +LLA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++
Sbjct: 950  RLLAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVV 1005

Query: 580  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
            YK E   +   A D    W +   ++D +   G +   N++ VR     + + +    E 
Sbjct: 1006 YKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EP 1061

Query: 640  VGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV 683
              E HL    N + HG+              LP S       VG    +++  + G +GV
Sbjct: 1062 GSEIHLMHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGV 1120

Query: 684  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
             I  +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F 
Sbjct: 1121 FIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFS 1175

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEEL 770
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1176 LLPNDKKQMIAGELDRSVREIERKISDI 1203


>gi|189044515|sp|Q7RYR4.2|RSE1_NEUCR RecName: Full=Pre-mRNA-splicing factor rse-1
          Length = 1209

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 202/808 (25%), Positives = 357/808 (44%), Gaps = 84/808 (10%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVQQMGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 650  ALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTR 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +    
Sbjct: 710  LFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEE 426
               L I +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+
Sbjct: 770  ANYLRIFSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQ 829

Query: 427  SEMHFVRLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF- 462
                   +L  + F +                IS  P       LD  E   S     F 
Sbjct: 830  QSNGDATVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFA 889

Query: 463  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            S +   +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G
Sbjct: 890  SQEGESFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQG 949

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            +LLA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++
Sbjct: 950  RLLAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVV 1005

Query: 580  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
            YK E   +   A D    W +   ++D +   G +   N++ VR     + + +    E 
Sbjct: 1006 YKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EP 1061

Query: 640  VGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV 683
              E HL    N + HG+              LP S       VG    +++  + G +GV
Sbjct: 1062 GSEIHLMHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGV 1120

Query: 684  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
             I  +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F 
Sbjct: 1121 FIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFS 1175

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEEL 770
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1176 LLPNDKKQMIAGELDRSVREIERKISDI 1203


>gi|242060436|ref|XP_002451507.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
 gi|241931338|gb|EES04483.1| hypothetical protein SORBIDRAFT_04g003000 [Sorghum bicolor]
          Length = 1232

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 204/852 (23%), Positives = 359/852 (42%), Gaps = 120/852 (14%)

Query: 16   LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
             QP A  + + + E   +L P++D  V +L  +   Q+ T  G     +LRI+R G+ I+
Sbjct: 399  FQPRALKNLMRIDE-IESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAIS 457

Query: 76   EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
            E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 458  EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTT 515

Query: 135  QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
             +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 516  HSLAVTLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 573

Query: 195  HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
             L+Y E+   G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI SL P
Sbjct: 574  ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDP 632

Query: 253  DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 300
            D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 633  DDCLQPLSVQSVSSAPESLLFLEVQASIGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 692

Query: 301  GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
            G+L+D +   LG +P  L      +   +   S RP + Y      L + ++   +    
Sbjct: 693  GQLSDTRSRFLGLRPPKLFPCVVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAS 752

Query: 361  PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SL 418
             F+S    + +       L I TI+ + +  +  +IPL   PR+     + +  A+  S 
Sbjct: 753  SFSSDQCSEGVVAVAGDALRIFTIERLGETFNETAIPLRYTPRKFVILPKKKYIAVIESD 812

Query: 419  KNQSCAEESEMHFVRLLD----------------------DQTFEFISTYPLDTFEY--- 453
            K    AEE E      L+                      +   E  +T+P + + Y   
Sbjct: 813  KGAFSAEEREAAKKECLEASGAAENGNANNGDPMENGDGQEDGAEEGNTFPDEQYGYPKA 872

Query: 454  ------------------------------GCSILSCSFSD-DSNVYYCVGTAYVLP--E 480
                                            SI + +F D +      VGTA  L    
Sbjct: 873  ESERWVSCIRILDPRSRDTTCLLELQENEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWP 932

Query: 481  ENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
                  G I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D
Sbjct: 933  RRTLAGGFIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----D 987

Query: 539  DGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
             G R+L  +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    
Sbjct: 988  LGKRKLLRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPR 1047

Query: 598  WMSAVEILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEV 639
            W++A + +D D   GA+   N++  R                  K  +G  +    ++E 
Sbjct: 1048 WLTAAQHIDFDTMAGADKFGNIYFARLPQDISDEIEEDPTGGKIKWEQGKLNGAPNKVEE 1107

Query: 640  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKL 698
            + ++H+G+ V   +  SL+        G    +I+GTV G +G ++A    E   F   L
Sbjct: 1108 IVQFHVGDVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHL 1160

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            + +LR+    + G +H  +RS          K+ +DGDL E +  L      +I+  ++ 
Sbjct: 1161 EMHLRQEHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDR 1215

Query: 759  SVEELCKRVEEL 770
            +  E+ K++E++
Sbjct: 1216 TPGEILKKLEDI 1227


>gi|449664009|ref|XP_004205855.1| PREDICTED: splicing factor 3B subunit 3-like [Hydra magnipapillata]
          Length = 1213

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 197/837 (23%), Positives = 361/837 (43%), Gaps = 123/837 (14%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI+   V DL  +   Q+    G     SLR++R+G+ ++E A  EL G    +W++
Sbjct: 395  SLAPIMHCQVADLANEDTPQLYAACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNSVWTV 454

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + ++ D  D ++VVSF++ T +L++   + +EE    GF   T TL C     + L+Q+ 
Sbjct: 455  KKNSTDEQDAYIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGEDALLQIY 512

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-V 209
               +R + S  R   NEWK+P   ++     N  Q+++A  G  LVY E+   G L E  
Sbjct: 513  PDGIRHIRSDRR--VNEWKTPGKKNIIQCAVNERQIVIALTGNELVYFELDQSGQLNEYT 570

Query: 210  KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 269
            +  ++  ++ C+ + P+      S+  AVG+  D +VRI SL   + +  E L  + +P 
Sbjct: 571  ERKEMSADVVCMALGPVHAGEQRSRFLAVGL-IDNTVRIISLDPNDCL--EPLSMQALPA 627

Query: 270  S-VLLCAFE---------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 313
            +   LC  E               G  +L   L +G LL  +L+  TG+L+D +   LG+
Sbjct: 628  AGESLCIIEMGGTEVGEKGTAGNAGGLFLNIGLANGVLLRTVLDSVTGDLSDTRIRYLGS 687

Query: 314  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
            +P+ L    +   + V A S R  + Y+   +   + ++ + + +   F S   P+ +  
Sbjct: 688  KPVKLFNVKTYGCSSVLAMSSRTWLSYTYQSRFHLTPLSYESLEYASSFASEQCPEGIVA 747

Query: 374  AKEGELTIGTIDDIQKLHIR-SIPLGEHPRRIC--------------HQEQSRTFAI--- 415
                 L I  ++ +  +  + + PL   PR+                H   ++TF +   
Sbjct: 748  ISSNTLRILALEKLGAVFNQVTTPLDFTPRKFVVDHKSHTLIMIETDHNAMTKTFKLDRK 807

Query: 416  ----------CSLKNQSCAEES------------EMHF-------------VRLLDDQTF 440
                      C   +++ A ES            E+ F             VR++D    
Sbjct: 808  QRIAEEMVESCGDNDEARAAESQVAANFLNTDIPEIQFGAPKAGIGRWASIVRIMDPIRS 867

Query: 441  EFISTYPLDTFEYGCSILSCSFSDD-SNVYYCVGTAYVL---PEENEPTKGRILVFIVED 496
            E      L+  E   S+    F++   + +  VG A  +   P  ++            D
Sbjct: 868  ETHHEIQLEQDEAAFSVCLTEFANQPGDRFVIVGCATKMILNPHSSQSCSIHTYQLYQND 927

Query: 497  -GKLQ--LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG- 552
             G++Q  L+ +        +L +F G+LL  + + +++Y     D G ++L  +C +   
Sbjct: 928  RGRMQLELLHKTPVDDIPGALCSFQGRLLVGVGRILRIY-----DLGKKKLLRKCENKKV 982

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
                  + T G  I+V D+  S   L YK ++  +   A D N  +++   ++D D   G
Sbjct: 983  STFITGIDTIGYRIMVHDIQDSFHFLKYKRKDNQLVLFADDVNKRFLTCGCLVDYDTMAG 1042

Query: 613  AENNFNLFTVRKNSEGATDEE-----------RGRL-------EVVGEYHLGEFVNRFRH 654
            A+   N+F VR  ++   D E           RG L       +VV  YH+GE     + 
Sbjct: 1043 ADKFGNIFFVRLPADVKDDIEEDPTGVKALWDRGLLNGASQKADVVSVYHIGETALSLQK 1102

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLN 713
             +L+        G   ++++ TV+G IG++      E   F + L+ ++R+    + G +
Sbjct: 1103 ATLI-------PGGSESLVYTTVSGGIGMLVPFTSREDIDFFQHLEMHMRQDSPPLCGRD 1155

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            H  +RS          KN +DGDL E F  L   +   I++ ++ +  E+ K++E++
Sbjct: 1156 HLWFRS-----SFSSVKNCVDGDLCEQFNSLEYAKRKAIAEELDRTPAEVSKKLEDI 1207


>gi|393245024|gb|EJD52535.1| hypothetical protein AURDEDRAFT_111199 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1214

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 202/806 (25%), Positives = 351/806 (43%), Gaps = 88/806 (10%)

Query: 33   NLGPIVDFCVVDLER--QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIK-GM 88
            ++ PI+D  V++L        Q     G     S R++R+G+ + E  S +L  GI   +
Sbjct: 418  SINPIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAV 477

Query: 89   WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 148
            W+ +   DDPFDT++V+SF++ T  L + + + +EE +  GF S   TL       + L+
Sbjct: 478  WTTKIRADDPFDTYIVLSFVNGT--LVLTIGETIEECQETGFLSAEPTLGVQQIGDDALL 535

Query: 149  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 207
            QV    +R + +  R   NEWK P G ++  A  N+ QV++A     LVY E+  DG L 
Sbjct: 536  QVYPHGIRHILADKRV--NEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLN 593

Query: 208  EVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 266
            E +  + +   +  L +  + E    +   AVG   D +VRI SL   N +    L    
Sbjct: 594  EYQDRKAMGSVVLALSMAEVPEGCQRTPYLAVGC-EDQTVRIISLDPDNTLETISLQALT 652

Query: 267  IPRSVLL------CAFEGIS---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
             P S +        A   IS   ++   L +G  L  +L+  TGELTD +   LGT+PI 
Sbjct: 653  APPSAICIVAMIDAAVNKISETLFVNIGLTNGLFLRTVLDPVTGELTDTRTRFLGTRPIR 712

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
            L   +      + A S R  + Y+  + L  + +    + ++  F +   PD     K  
Sbjct: 713  LNRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGS 772

Query: 378  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH------ 430
             + I  I  I Q+L    +PL   PR+I     +  F I    +++ ++E+ +H      
Sbjct: 773  TIKIFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEA-VHGALQQP 831

Query: 431  -----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                                          VR+++      I    LD  E   SI    
Sbjct: 832  DLKKYDRDVLELPPEVFGHPRAPAGIWASCVRIVNPVELTTIYRLDLDNNEAAFSIALVP 891

Query: 462  FSD-DSNVYYCVGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
            FS  D+ +   VGT   A++ P     T G +  + +++DG+ L+L+ + E      SL 
Sbjct: 892  FSARDNELTLVVGTAKDAFLAPRSC--TSGYLRTYRVLDDGRGLELLHKTECDDIPLSLL 949

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKS 574
            AF GKL+A I + +++Y     D G ++L  +        A+  + T+G  I+ GD  +S
Sbjct: 950  AFQGKLVAGIGKCLRIY-----DMGKKKLLRKAESKLFTTAITSLSTQGARIIAGDAQQS 1004

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATD 631
            I   +YK  E  +   A D    W ++  +LD +  +  +   N+F  R +   S    D
Sbjct: 1005 IFFCVYKAAENRLLVFADDSQQRWTTSQLMLDYNTVVAGDKFGNVFVNRLSDHVSNLVDD 1064

Query: 632  EERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGV 683
            +  G      +   +G  H    +  F  G ++M L  + +  G    +++  ++G IG+
Sbjct: 1065 DPTGAGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREVIVYFGLHGTIGM 1124

Query: 684  IASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            +     ++ + F   L+ ++R     +   +   WR +      V  K  +DGDL E F 
Sbjct: 1125 LVPFASKEDVDFFTTLEQHMRSENLSLVSRDILAWRGY-----YVPVKAVVDGDLCEYFA 1179

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVE 768
             L + +   ++  ++ +V E+ K++E
Sbjct: 1180 KLPQGKQGGLAGELDRTVGEVLKKLE 1205


>gi|221044336|dbj|BAH13845.1| unnamed protein product [Homo sapiens]
          Length = 222

 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 114/154 (74%), Gaps = 2/154 (1%)

Query: 10  QLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVR 69
           QL+KLN+  + +GSYV  +E + NLGPIVD CVVDLERQGQGQ+VTCSGA+K+GSLRI+R
Sbjct: 57  QLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR 116

Query: 70  NGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           NGIGI+E AS++L GIKG+W LRS  +   D  LV+SF+ +TR+L +N E E+EETE+ G
Sbjct: 117 NGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQTRVLMLNGE-EVEETELMG 175

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSR 163
           F    QT FC +  + QL+Q   GS RLV    +
Sbjct: 176 FVDDQQTFFCGNVAHQQLIQ-PPGSGRLVKPEGK 208


>gi|428180158|gb|EKX49026.1| hypothetical protein GUITHDRAFT_68305 [Guillardia theta CCMP2712]
          Length = 1202

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 203/824 (24%), Positives = 352/824 (42%), Gaps = 113/824 (13%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L PI+D  V+DL  +   Q+    G     +LR +R+G+ + E A  EL      +W++
Sbjct: 401  SLSPILDMRVLDLAGEETPQIYALCGKGPRSTLRTLRHGLAVAEMAVSELPSNPLAVWTV 460

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + S+ D  D ++VV+F + T +L++   D +EE    GF +  +TL       + L+QV 
Sbjct: 461  KGSSKDAADKYIVVTFANATIVLSIG--DTVEEVTDSGFLATNKTLSVSLLGDDSLLQVH 518

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 211
               +R V S  R   +++  P    +N+   N  QV++A     ++Y E+ D +    + 
Sbjct: 519  PNGLRTVRSDKR--ISQFTPPNKGVINLVAVNQQQVVVALADHTMIYFEL-DAVGQLQEK 575

Query: 212  AQLEY---EISCLDINPIGENPSYSQIAAVGMWTDIS--VRIFSLPD---LNLITKEHLG 263
            A+ E    +I+ LDI+P+G   S  +  AVG   D S  VRI SL     +++++++ L 
Sbjct: 576  AKPEIGGGQIAALDISPLGAGRSRGRFLAVGASVDGSWFVRILSLDPGSFMHIVSRQALP 635

Query: 264  GEIIPRSVLLCAFEGIS-------------YLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
             +  P S  LC  E IS             +L   L +G L+   ++  TG+L    +  
Sbjct: 636  AK--PES--LCLIE-ISIGAAQSDGGTPTLFLFAGLENGVLMRITVDPITGQLAPEFRTR 690

Query: 311  -LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
             LGT+P+ L     +    V A S R  + Y+   +   + ++ + + +   F S   P+
Sbjct: 691  FLGTKPVKLFKVLVQEQPAVLALSSRSWLAYNFQGRYQITPLSYETLEYASGFASDQCPE 750

Query: 370  SLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI------------- 415
                     L I T++ + +  +  S+ L   PR+    + S  F +             
Sbjct: 751  GFVCVAANTLRILTVERLGEVFNQHSMKLSFTPRKSALLKDSGCFVVLETDHNSDMEKAK 810

Query: 416  ---CSLK-----------------NQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC 455
               C +                   Q   E      VR++D    E      LD  E   
Sbjct: 811  EARCDVAEDEEEENENKLPHSIYGEQRAGEAKWASRVRVIDPNERETKQIIELDPNEAAL 870

Query: 456  SILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 514
            S+   +F D   + + C GTA      +    G +  + V   +L  + +    G   +L
Sbjct: 871  SVCVATFYDRKGHTFLCFGTAVGHKVGSRTGSGFLHTYSVVGSQLTFVHKTPIDGVPRAL 930

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMK 573
             +F G+LL  +   ++LY+      G R+L  +C +     L + + T GD I VGD+ +
Sbjct: 931  CSFQGRLLVGVGSALRLYEM-----GKRKLLRKCENRNIPNLVVTISTMGDRIYVGDVAE 985

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATD 631
            SIS L Y      +   A D +  WM+A   +D D   GA+   N+F  R   N      
Sbjct: 986  SISFLKYNRILNELVIFADDTHPRWMTAACPVDYDTVAGADKFGNIFLTRLPDNVSDEIS 1045

Query: 632  EERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
            EE G               + E + +YH+GE V   +  +L         G    +I+GT
Sbjct: 1046 EEPGAVGMFEGNDLQGAHYKAEEIVQYHVGETVCSLQKATL-------SPGGSDAIIYGT 1098

Query: 677  VNGVIGVIAS-LPHEQYLFLEKLQTNLRKVI---------KGVGGLNHEQWRSFNNEKKT 726
            + G IG +   +  E   F   L+ +LR            +G+ G +   +RS+      
Sbjct: 1099 MYGGIGALQPFVSREDVDFFLHLEMHLRGAAGAREHKPAGEGICGRDQLSFRSY-----Y 1153

Query: 727  VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
               K+ +DGDL E+F  LS +R  +I++ ++ +  E+ K++E++
Sbjct: 1154 FPVKDVVDGDLCETFNYLSPSRQKQIAEDLDRTPGEVAKKLEDM 1197


>gi|340520436|gb|EGR50672.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1212

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 199/816 (24%), Positives = 350/816 (42%), Gaps = 97/816 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   ++ P++D  + +L  +   Q+ T  G     + R +++G+ INE  S EL GI 
Sbjct: 416  LVESIPSMNPLLDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ + ++ +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTLKLNRNEQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTSVPTLAAQLLGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +      N+W +P   S+  AT NA QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGQV---NQWDAPQHRSIVAATTNAHQVAIALSSGEIVYFEMDDDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDCTVRILSLDPESTLENKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + + E  S      YL   L  G  L  +L+  TGELTD ++  LG + +
Sbjct: 650  ALTAAPTSLAIISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F S    + +   
Sbjct: 710  RLFQVTVQGRTCVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGI 769

Query: 375  KEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQS-----CAE--- 425
            +   L I ++D +    I+ SIPL   P+++        F +    N +     CA+   
Sbjct: 770  QGQTLRIFSVDRLGDTLIQSSIPLTYTPKKMVKHPDQPLFYVIEADNHTLSPALCAQLLA 829

Query: 426  --------------------------ESEMHFVRLL--DDQTFEFISTYPLDTFEYGCSI 457
                                       S +  V  L  D Q  + I    L+  E   S+
Sbjct: 830  DPARVNGDSKVLPPEEFGHPRGNRRWASCISVVDPLAEDGQVLQRID---LEENEAAVSL 886

Query: 458  LSCSFSDDSN-VYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYS 513
               +F+   N  +  VGT   +   P         I  F  +   L  I + + +    +
Sbjct: 887  AIVTFASQENETFLVVGTGKDMVLNPRSFSDAFVHIYRFERDGRGLVFIHKTKVEEPPMA 946

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            +  F G++L  I + +++Y   +R    R+ Q+E      I++L  Q  G  IVVGD+ +
Sbjct: 947  MIPFQGRVLVGIGKMLRIYDLGMR-QLLRKSQAEVAPQ-QIVSLNAQ--GSRIVVGDVQQ 1002

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGAT 630
             I+ +++K +   +     D  A W +   ++D +   G +   N+F VR   K SE A 
Sbjct: 1003 GITYVVFKQQTNKLIPFVDDTVARWTTCSTMVDYETTAGGDKFGNIFIVRAPQKASEEAD 1062

Query: 631  DEERG---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
            +E  G               RL+++   +  +        SLV       VG    +++ 
Sbjct: 1063 EEPAGLHLLNARSYLHGTSHRLDLMCHLYTQDIPTSITKTSLV-------VGGQEVLLWS 1115

Query: 676  TVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
             + G IGV I  +  E   F + L+ +LR     + G +H  +RS+    K V     +D
Sbjct: 1116 GLMGTIGVLIPFVTREDADFFQSLEQHLRAEDPPLAGRDHLMYRSYYAPMKGV-----ID 1170

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL E +  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1171 GDLCERYALLPNDKKQMIAGELDRSVREIERKISDI 1206


>gi|321249291|ref|XP_003191408.1| U2 snRNA binding protein [Cryptococcus gattii WM276]
 gi|317457875|gb|ADV19621.1| U2 snRNA binding protein, putative [Cryptococcus gattii WM276]
          Length = 1217

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 205/816 (25%), Positives = 356/816 (43%), Gaps = 102/816 (12%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVTEMVSSPLPGVPTNVW 479

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSE 595

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTPFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICH---------QEQSRTFAICSLKNQSCAEES 427
            L I +I  + +KL   S PL   PR+ I H         +   RT++  +++     +ES
Sbjct: 775  LRIFSIPKLGEKLKQDSTPLTYTPRKFISHPFNPVFYMIEADHRTYSKGAIERIVKQKES 834

Query: 428  E-----------------------MHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
            E                        H+   VR+LD    E I T+ LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTFDLDEDEAAFSIAIAY 894

Query: 462  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGF 954

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA + + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 628
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 629  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 675
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSPDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIASDLDRSVGDVLKKLEQM 1211


>gi|145510432|ref|XP_001441149.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408388|emb|CAK73752.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1174

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 182/834 (21%), Positives = 353/834 (42%), Gaps = 129/834 (15%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            K  ++ +L+   N   I D  V DL ++G  Q+  C  A    +LR++R+G+ I + A+ 
Sbjct: 381  KLKHLSLLQELNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANT 440

Query: 81   ELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC 139
             LQ    G+W+L+   +DP   ++V+S+I++T  L + + +++E+    G     QT+  
Sbjct: 441  NLQAKPLGIWTLKERYEDPVHKYIVISYINKT--LVLKIGEKVEQVHDTGLEGTKQTIHV 498

Query: 140  HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN----VATANASQVLLATGGGH 195
               I +  +Q+ +   R +           K P  Y ++       +N  QV  A  GG 
Sbjct: 499  GTLIDDSQIQILTNGYRHIRKN--------KPPTDYIIDGKVIKGVSNEKQVAFALAGGD 550

Query: 196  LVYLEIG----DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            + Y E+      G L E+   Q++ EI  L++ PI E     +   V + +D ++R+ SL
Sbjct: 551  VYYFELDTTSFQGNLIEITKDQMDNEIKALELGPIEEGRQRCKFLCVAL-SDQTIRLLSL 609

Query: 252  PDLNLITKEHLGGEIIPRSV-LLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
               +   +  +  + +P     LC  E  S            +L   L +G L+   ++ 
Sbjct: 610  EPESCFERGAM--QALPSEAESLCMMEMASEQEGQQSFTKQLFLFIGLNNGLLMRTSVDQ 667

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             +G L+D +   LGT+P+     ++     + A S R  + Y+++ ++    ++   + +
Sbjct: 668  LSGGLSDTRTRYLGTKPVKCLRINANQQQAMLALSSRSWLCYNNSGRIFMQPLSYDYLDY 727

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI----------RSIPLGEHPRRICHQE 408
               F          +AKE +  +GT     ++ +          +S+ L   PR++   E
Sbjct: 728  ASAF----------LAKEFQGIVGTNQSTLRIIMPERFGEIFNQQSLDLTYSPRKMIFHE 777

Query: 409  QSRTFAICSLKNQSC------------------------AEESE-MHFVRLLDDQTFEFI 443
             S+   I    N+S                         AE+ +    +R++D    E I
Sbjct: 778  PSKAIFIIESDNRSYNNVEQKVQEVYQTQEIPEQWNQVQAEQYKWASLIRIVDATKLETI 837

Query: 444  STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK----GRILVFIVEDGKL 499
            + +     ++ CSI    F+     Y CVGT   L   NEPT+    G I  FI ++  L
Sbjct: 838  NVHQFYENQHACSICYIQFAGYPEQYVCVGTVKDLV--NEPTRKFSQGFIHTFIYDNKTL 895

Query: 500  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW----MLRDDGTRELQSECGHHGHIL 555
            +L    +     Y+L A+ G+LL      +++Y+     +L+    + L S         
Sbjct: 896  KLKHSTQIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIKNLNS--------F 947

Query: 556  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
               +  + D I V ++  SI LL Y   +    E A D    +++A  +LD    +  + 
Sbjct: 948  ITSIMVKEDRIYVAEVSDSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDK 1007

Query: 616  NFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
              N+F  R                  K  +G  +    +++ +  +++GE +   +  +L
Sbjct: 1008 FENIFVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAPFKMDQICNFYVGEVITSLQKIAL 1067

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQ 716
            V     S+V     V++GT  G I  +    +++ + F   L+  LR   + + G +H Q
Sbjct: 1068 VS--TSSEV-----VVYGTSMGSIAALYPFDNKEDIDFFLHLEMYLRVEHQPLSGRDHMQ 1120

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS     K++     +DGDL E F ++   +   +++  + +  ++ K++E++
Sbjct: 1121 FRSAYGPCKSI-----IDGDLCEQFGNMQYNKQRTVAEEFDRTPADIIKKLEDI 1169


>gi|336257679|ref|XP_003343663.1| hypothetical protein SMAC_08834 [Sordaria macrospora k-hell]
 gi|380091896|emb|CCC10625.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1209

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 202/812 (24%), Positives = 357/812 (43%), Gaps = 92/812 (11%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P VD  V +L      Q+ +  G     + R +++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPQVDCKVANLTGDDAPQIYSVCGNGARSTFRSLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL       +
Sbjct: 476  SAVWTTKLTKYDQYDAYIVLSFTNGTLVLSIG--ETVEEVSDSGFLTTAPTLAVRQMGED 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDG 590

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 591  SLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQ 649

Query: 263  GGEIIPRSVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P ++ + + E    G + YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 650  ALTAAPSALSIMSMEDSFGGFTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 709

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +    
Sbjct: 710  LFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIH 769

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVR 433
               L I +I+ +    I +SIPL   P+R+  H EQ   + I S  N    E       +
Sbjct: 770  ANYLRIFSIEKLGDNMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTLPPELR----AK 825

Query: 434  LLDDQTFEFISTYPLDTFEY--------GCSILSCSFSDDSNVYYCVG--------TAYV 477
            LL+ Q+    +  P + F Y         C  +    SD+  V   +         +A +
Sbjct: 826  LLEQQSNGDATILPPEDFGYPKAKGRWASCISIIDPISDEPRVLQRIDLDNNEAAVSAAI 885

Query: 478  LP---EENEP-----------------TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
            +P   +E E                  T+G I V+   EDG+ L+ I +   +    +L 
Sbjct: 886  VPFASQEGESFLVVGTGKDMVLNPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPMALI 945

Query: 516  AFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
             F G+LLA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + +
Sbjct: 946  PFQGRLLAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGV 1001

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            + ++YK E   +     D    W +   ++D +     +   N+  VR     + D +  
Sbjct: 1002 TYVVYKAEGNRLIPFVDDTLNRWTTCTTMVDYESVASGDKFGNISIVRCPERVSQDTD-- 1059

Query: 636  RLEVVGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNG 679
              E   E HL    N + HG+              LP S       VG    +++  + G
Sbjct: 1060 --EPGSEIHLMHARN-YLHGTPNRLSLQVHFFTQDLPTSICKTSLVVGGQDVLLWSGLQG 1116

Query: 680  VIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             +GV I  +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL 
Sbjct: 1117 TVGVFIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLC 1171

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E F  L   +   I+  ++ SV E+ +++ ++
Sbjct: 1172 ERFSLLPNDKKQMIAGELDRSVREIERKISDI 1203


>gi|355718834|gb|AES06402.1| splicing factor 3b, subunit 3, 130kDa [Mustela putorius furo]
          Length = 1101

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 200/802 (24%), Positives = 349/802 (43%), Gaps = 134/802 (16%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
            TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 328  TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 375

Query: 62   DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
              SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 376  RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 433

Query: 121  ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
             +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 434  TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 491

Query: 181  TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDIN--PIGENPS-YSQI 235
              N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +   P GE  S +  +
Sbjct: 492  AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 551

Query: 236  AAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------G 278
             AVG+  D +VRI SL   + +  + L  + +P +   LC  E                G
Sbjct: 552  LAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIG 608

Query: 279  ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV 338
              YL   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  +
Sbjct: 609  FLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWL 668

Query: 339  IYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPL 397
             YS   +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL
Sbjct: 669  SYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPL 728

Query: 398  GEHPRR-ICHQEQSR-----------TFAICSLKNQSCAEE-------------SEM--- 429
               PR+ + H E +            T A  + + Q  AEE             +EM   
Sbjct: 729  QYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAA 788

Query: 430  ----------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 467
                                    +R+++      +    L+  E   S+  C FS+  +
Sbjct: 789  FLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGD 848

Query: 468  VYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLA 523
             +Y  VG A  L        G  +    +V +G KL+ + +   +    ++  F G++L 
Sbjct: 849  DWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLI 908

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIY 580
             + + +++Y     D G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + Y
Sbjct: 909  GVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRY 961

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE------ 632
            K  E  +   A D    W++   +LD D   GA+   N+  VR   N+    DE      
Sbjct: 962  KRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNK 1021

Query: 633  ---ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
               +RG L       EV+  YH+GE V   +  +L+        G   ++++ T++G IG
Sbjct: 1022 ALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIG 1074

Query: 683  VIASL-PHEQYLFLEKLQTNLR 703
            ++     HE + F + ++ +LR
Sbjct: 1075 ILVPFTSHEDHDFFQHVEMHLR 1096


>gi|430813298|emb|CCJ29330.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 1197

 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 183/806 (22%), Positives = 350/806 (43%), Gaps = 96/806 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            ++ P++D  +++L  +   Q+    G     + R +R G+ +NE  +  L G    +W+ 
Sbjct: 414  SMNPLMDSKILNLTDEDAPQIYALCGRGPRSTFRTLRYGLEVNEIVASGLPGSPTAVWTT 473

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + ++ D +D ++V+SF++ T +L++   + +EE    GF S + TL       + L+QV 
Sbjct: 474  KLTSSDQYDAYIVLSFVNGTLVLSIG--ETVEEVSDTGFLSSSPTLAVQQLGDDALIQVH 531

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
               +R + +  R   NEWK+P   S+   T N  QV++A   G +VY E+ D G L E +
Sbjct: 532  PKGIRHIQADKRV--NEWKTPQHRSIVQVTTNQRQVVVALSNGEIVYFELDDEGNLNEYQ 589

Query: 211  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII-- 267
               Q+   ++ L I  + E        AVG   D +VRI SL   N  T E L  + +  
Sbjct: 590  DRKQMTGSVTSLSIGHVPEGRQRHPFLAVGC-DDSTVRIISLEPEN--TLESLSVQALTA 646

Query: 268  -PRSVLLCAFEG----ISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 322
             P S+ + + +       YL   L +G  L  +L + TG+L D +   LG++P+ L + +
Sbjct: 647  PPNSLCIMSMKDGNIETFYLHIGLFNGVYLRSVLELSTGQLKDTRTRFLGSRPVKLFSVT 706

Query: 323  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 382
             +N   V A S RP + Y  N  L    +    + +   F+S    + +   +  +L I 
Sbjct: 707  IQNQLSVIALSSRPWLSYIINASLHLVPLIYDSLEYCWGFSSEQCSEGIVGIQGQDLKIF 766

Query: 383  TIDDIQK-LHIRSIPLGEHPRR-ICHQEQSRTFAICSLKNQSCAEESEMHF--------- 431
             ++ +   L   SI L   PRR I H ++   + I S  N     E +            
Sbjct: 767  MVERLDNVLKQDSISLMYTPRRFIKHPDEHIFYIIESDHNVLPLSERQKRVEGLQNGDHI 826

Query: 432  -------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VYYC 471
                               + +LD  + + ++   LD  E   SI   +F + ++ ++  
Sbjct: 827  LLPEDIGLPRGLSGNWASCITILDPLSKKILTRIELDDNEAAFSIAMVTFKNQNDEIFLA 886

Query: 472  VGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
            +G+     + P+        I  FI +   ++L+ + E      +L  F G+LLA + + 
Sbjct: 887  IGSGKNVILAPKSFSAAYISIYRFIDQGKSIELVHKTEVDDIPLALLGFQGRLLAGLGKM 946

Query: 529  IQLYKWMLRDDGTRELQSECGHHGHILA-----LYVQTRGDFIVVGDLMKSISLLIYKHE 583
            +++Y+  ++         +C     + A     + + T+G  I++ D+ +SI   +YK+ 
Sbjct: 947  LRIYEMGMK---------KCLRKCEVRAVPNCIVQLHTQGSRIIIADIQESIHFAVYKYL 997

Query: 584  EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG----- 635
            E  +   A D    W +   +LD +     +   N +  R   + SE A ++  G     
Sbjct: 998  ENRLIVFADDVIPRWTTTSTMLDYETVAAGDKFGNFWINRCPLEVSESADEDPSGAQLIH 1057

Query: 636  ----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-I 684
                      RL+++  +++G+         L+        G    +++  + G IG+ +
Sbjct: 1058 EKSYLFGAAKRLKMLAHFYIGDTFTSMHKVQLI-------AGGRDIIVYTGMMGSIGIFL 1110

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
              +  E   F ++L+  +R     + G +H  +R +      V  K+ +DGDL E FL L
Sbjct: 1111 PFVGREDVDFFQQLEALMRTEDLSLIGRDHLMYRGY-----YVPVKSVVDGDLCERFLML 1165

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
               +   I+  ++  + E+ K++E++
Sbjct: 1166 PYNKKQVIANELDREISEIAKKIEDM 1191


>gi|171685748|ref|XP_001907815.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942835|emb|CAP68488.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1235

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 207/834 (24%), Positives = 365/834 (43%), Gaps = 113/834 (13%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P +D  V +L  +   Q+ +  G     S R++++G+ ++E  + EL G  
Sbjct: 419  LVESIDSMNPQIDCKVANLTGEDAPQIYSVCGNGARSSFRMLKHGLEVSEIVASELPGTP 478

Query: 87   G-MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 479  AAVWTTKLTKYDEYDAYIVLSFTNATLVLSIG--ETVEEVSDSGFLTTVPTLAVQQLGEE 536

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  A  N +QV++A   G +VY E+  DG
Sbjct: 537  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADG 593

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL P+  L  K   
Sbjct: 594  SLAEYDEKKEMSGTVTSLSLGRVPEGLRRSSFLAVGC-DDCTVRILSLDPESTLEMKSIQ 652

Query: 263  GGEIIPRSVLLCAFE----GIS-YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P S+ + + E    G + YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 653  ALTAAPASLSIMSMEDSFGGTTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 712

Query: 318  LRTFSSKNTTHVFAASDRPTVIYS-----------------------SNKKLLYSNVNLK 354
            L   S +    V A + RP + Y+                       S+++ L   V + 
Sbjct: 713  LFQVSVQGRPCVLALNSRPWLGYTDPITKGFVMTPLSYVDLEYGWNFSSEQCLEGMVGIH 772

Query: 355  EVSHMCPFNSAAFP-------DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRIC-H 406
                   FN    P       DS AIA   +  +G  + IQK    SIPL   P+R+  H
Sbjct: 773  ANFLRYVFNLFLLPLLYDDKRDSYAIAMRVDYDLGD-NMIQK----SIPLTYTPKRLVKH 827

Query: 407  QEQSRTFAI--------CSLKNQSCAEESEMHFVRLLDDQTFEF---------------- 442
             EQ   + I          L+ Q  A+ +      +L  + F +                
Sbjct: 828  PEQPYFYTIEADNNTLPPELRAQLLAQSNTNGDAAILPPEEFGYPKARNRWASCISIVDP 887

Query: 443  ISTYP-------LDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF- 492
            +S  P       LD  E   S    SF S D   +  VGT   ++    + ++G I V+ 
Sbjct: 888  VSDEPSVLNRVDLDNNEAAISAAVVSFASQDGESFLIVGTGKDMILSPRQFSEGYIHVYR 947

Query: 493  IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH 551
              +DG+ L+ I + + +    +L  F G+LLA I + +++Y   L+    R+ Q+E    
Sbjct: 948  FHDDGRDLEFIHKTKIEEPPMALIPFQGRLLAGIGKTLRIYDLGLK-QLLRKAQAEIAPQ 1006

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
               L + +QT+G+ IVVGD+ + I+  +YK E   +   A D    W +   ++D +   
Sbjct: 1007 ---LIVSLQTQGNRIVVGDVQQGITYAVYKPESNKLLAWADDTINRWTTCTAMVDYESVA 1063

Query: 612  GAENNFNLFTVRKNSEGA--TDEERGRLEVVGEYHLGEFVNRFRHGSLVMR------LPD 663
            G +   N++ +R     +  +DE    +++V   H   +++   + + +M       LP 
Sbjct: 1064 GGDKFGNVWILRAPERASQESDEPGSEIQLV---HAKSYLHGAPNRTALMAHFYTQDLPT 1120

Query: 664  S------DVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            S       VG    +++  + G +GV I  +  E   F + L++++R     + G +H  
Sbjct: 1121 SITKTNLVVGGQDVLLWSGIQGTVGVLIPFVSREDVDFFQSLESHMRAEDPPLAGRDHLI 1180

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R +      V  K  +DGDL E F  L+  +   I+  ++ SV E+ +++ ++
Sbjct: 1181 YRGY-----YVPVKGVIDGDLCERFALLANDKKQMIAGELDRSVREIERKISDI 1229


>gi|156051126|ref|XP_001591524.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980]
 gi|154704748|gb|EDO04487.1| hypothetical protein SS1G_06970 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1147

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 176/670 (26%), Positives = 302/670 (45%), Gaps = 75/670 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
            + ++E   ++ P++D  V +L  +   Q+ +  G     + R +++G+ ++E    EL G
Sbjct: 414  LSLVESIDSMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHGLEVSEIVESELPG 473

Query: 85   IK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            +   +W+ + + +D +D ++++SF + T +L++   + +EE    GF S   TL      
Sbjct: 474  VPSAVWTTKLTRNDVYDAYIILSFSNGTLVLSIG--ETVEEVTDTGFLSSAPTLAVQQLG 531

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-G 202
             + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A   G +VY E+  
Sbjct: 532  EDSLIQVHPKGIRHIRADRR--VNEWAAPQHRSIVAATTNERQVAVALSSGEIVYFEMDS 589

Query: 203  DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKE 260
            DG L E  +  ++   ++CL +  + E    SQ  AVG   D +VRI SL PD  L  K 
Sbjct: 590  DGSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRILSLDPDSTLENKS 648

Query: 261  HLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
                   P ++ + A    S      YL   L  G  L  +L+  TGEL+D +   LG +
Sbjct: 649  VQALTSPPNALSIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGPK 708

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            P+ L   S +  T V A S RP + YS    K  + + ++   +     F+S    + + 
Sbjct: 709  PVKLFRVSVQGQTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWGWNFSSEQCTEGMV 768

Query: 373  IAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF 431
              +   L I +I+ +   L   SIPL   PRR     +   F +    N   +  ++   
Sbjct: 769  GIQGQNLRIFSIEKLTNNLLQESIPLTYTPRRFVRHPEHPLFYVVEADNNILSPATKQ-- 826

Query: 432  VRLLDDQTF-----------EFISTYPLDTFEYGCSI-----------LSCSFSDDS--- 466
             +LL+D +            EF   YP  T  +   I           L+    +D+   
Sbjct: 827  -KLLEDPSVVNGDATVLPAEEF--GYPRGTNHWASCISVVDPVTEKKVLATIHLEDNESA 883

Query: 467  -------------NVYYCVGTA---YVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETK 508
                           +  VGT     V P  +  + G I V+   EDGK L+ I + + +
Sbjct: 884  VSVAVVAFASQEDETFLVVGTGKDLVVSPRSS--SAGFIHVYRFHEDGKELEFIHKTKVE 941

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
                +L AF G+LLA + + +++Y   +R    R+ QSE   +   + + +QT+G  I+V
Sbjct: 942  EPPMALLAFQGRLLAGVGKDLRIYDLGMR-QLLRKAQSEIAPN---MIVGLQTQGSRIIV 997

Query: 569  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KN 625
             D+ +SI++++YK +E  +     D  A W S   ++D +   G +   NL+ +R   K 
Sbjct: 998  SDVQESITMVVYKFQENRLIPFVDDTIARWTSCTTMVDYETVAGGDKFGNLWLLRCPPKA 1057

Query: 626  SEGATDEERG 635
            SE A +E  G
Sbjct: 1058 SEEADEEGSG 1067


>gi|328770812|gb|EGF80853.1| hypothetical protein BATDEDRAFT_29900 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1213

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 189/811 (23%), Positives = 359/811 (44%), Gaps = 97/811 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L P++D  V++L  +   Q+    G     + RI+R+G+ ++E A  EL G    +W++
Sbjct: 421  SLCPLIDAKVLNLTDENSPQIYALCGRGSRSTFRILRHGLDVSEMAVSELPGNPNAIWTV 480

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R S  D +D+++++SFI+ T +L++   + +EE    G  + T T+       N LVQV 
Sbjct: 481  RRSVSDIYDSYIIISFINATLVLSIG--ETVEEVTDTGVLATTSTITVGQLGENALVQVY 538

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R + +  R   +EWK+P   S+  A  N  QV++A     +VY E+   G L E +
Sbjct: 539  PQGIRYIRADKRV--SEWKAPTNQSIVSAACNQRQVVVALSNNEIVYFELDVSGHLNEFQ 596

Query: 211  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEI 266
               ++   + CL ++PI      ++  A+G   D++VRI SL P+  L+ ++ + L    
Sbjct: 597  DRKEMSSRVLCLSLSPIPTGRLRARFLAIGC-ADLTVRILSLDPESCLHPLSMQALSAP- 654

Query: 267  IPRSVLLCAFE----GIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             P S+ +        G+S  +L   L +G LL   ++  +G ++D +   LG++ + L  
Sbjct: 655  -PDSLAMIDMPDPTTGVSNLFLNIGLANGVLLKTCVDSGSGNMSDTRMRFLGSRGVKLFL 713

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
               +  T + A S RP + ++ + +     ++ + + +   F S    + +       L 
Sbjct: 714  LKIQGETGLLALSSRPWISFTYHSRSKLMPLSYESLEYGSSFCSEQCTEGIVAITGNTLR 773

Query: 381  IGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTF-------------------------- 413
            I   + +  +  + SIPL   PRR    + S+ F                          
Sbjct: 774  ILNTEKLGSVFKQASIPLKYTPRRFIFDQVSQNFVVIESDHGVFCPSDRAKILETKATLD 833

Query: 414  ----------AICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF- 462
                      A+    +     E     +R++     E +    LD  E    I  C F 
Sbjct: 834  ADEGTIPEELAVEQFGHSKAGPERWASCIRVISPIHGETLHLEDLDDNEAAFCISFCIFQ 893

Query: 463  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNG 519
            S  +  +  VGTA  V    +  T+G + V+ +  DG  L+ + +   KG    + +F G
Sbjct: 894  SSLTTTHIVVGTASNVNLSSSSFTEGYLRVYKLAPDGTSLEFLHKTPIKGIPKVMCSFQG 953

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLL 578
            +LL  +   +++Y     D G +++  +C   G    +  + T+G+ I++GD  +S+   
Sbjct: 954  RLLVGVGSLLRIY-----DLGKKKMLRKCECKGFPTTIVTLHTQGNRIILGDAQESVHYA 1008

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--GATDE---- 632
            +Y+  +  I   A D    W++A  ++D D  +G +   N+F  R ++E     DE    
Sbjct: 1009 MYRAFDNRIVIFADDTIPRWVTATCMVDYDTVVGGDKMGNIFVNRLSAEVSKGIDEDTTG 1068

Query: 633  -----ERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
                 +RG L+          ++ LGE +      SLV        G    +++ T+ G 
Sbjct: 1069 NQAIFDRGYLQGAPHKVHHEADFFLGETLTSLTKTSLVP-------GGREILLYTTLMGG 1121

Query: 681  IG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG +I  +  +   F + L+  +R     + G +H  +RSF      +     +DGDL E
Sbjct: 1122 IGLLIPFISKDDVDFFQTLEMTMRSECPPLCGRDHLAYRSFYTPVHAI-----IDGDLCE 1176

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             F  +   +   I+++++ SV ++ K++E++
Sbjct: 1177 MFNVMVGDKKRGIAESVDRSVADVGKKLEDM 1207


>gi|58269920|ref|XP_572116.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|57228352|gb|AAW44809.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1276

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 190/764 (24%), Positives = 352/764 (46%), Gaps = 70/764 (9%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQG 84
            E+LER++N+ P+ D CVV  E      +V  SGA +  SLR+VR+G+G+ E  +++ L  
Sbjct: 492  EILERWMNIAPVKDLCVVKDEGGNLSHLVLASGASESNSLRVVRSGVGLEELVTIQGLHD 551

Query: 85   IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIY 144
            ++ MW L  ST  P    L++S  + T  + + L+ E+    I      ++TL       
Sbjct: 552  VQKMWPLTDSTAIPR---LLLS--TSTSTILLQLQPEISAIPITDVIFNSETLAAGILPG 606

Query: 145  NQLV-QVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
             +L+ QVT   + L S  S  +L  + +      +  A   A   ++A  GG LV   + 
Sbjct: 607  AELLAQVTPRGLSLWSDLSVGQLEAQVEVDKETEIVCAQVTADWAVVAKKGGSLVVFHVS 666

Query: 203  DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDL-NLITKEH 261
            +   +      ++ E+S + I+    + S   + +  M       +++L  + N +    
Sbjct: 667  NTGFSPQGTIDVKEEVSAVAISSSSGSSSPIIVISTWM---AKTFVYTLSQISNGVDGLS 723

Query: 262  LGGEIIPRSVLLCA---FEGISYLLCALGDGHLLNFLLNMK-TGE-----LTDRKKVSLG 312
            +  E    S+ L +   +     LL  L +G L  + LN   +GE     +   K  SLG
Sbjct: 724  IQSESSATSLQLRSHPFYPAGIQLLSGLDNGLLHIYDLNTSDSGEAEGLMVKSSKTTSLG 783

Query: 313  TQPITLRTFSSKNTTHVFAA---SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
             +P+ L    S +      +   ++R +VI+ S  ++ +S+VN+K V      ++++ P 
Sbjct: 784  LRPLVLHPCESTHGDEKVISVGLTERMSVIFESKDRIEFSSVNIKNVMAATSVDTSSGPV 843

Query: 370  SLAIAKEGELTIGTIDDIQKLHIRSIPLG-EHPRRICHQEQSRTFAICSLKNQSC--AEE 426
                ++   L++  ++ ++KLH+++   G E   ++ + ++ +  A  S +       + 
Sbjct: 844  FALFSRTSGLSLVKVNSLKKLHVQTCDTGNESISKLTYMDEYKAIACGSTRRTQLRDGDV 903

Query: 427  SEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT- 485
             E +FV++ D  + E +S++ L   E   S+ S   +    +Y  VGTA++  ++ E + 
Sbjct: 904  EEENFVQIRDGTSLEPLSSFSLRGRELVTSLRSVFLT--GRIYLAVGTAFLPADDGEDSS 961

Query: 486  ----------KGRILVFIVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
                      +GR+L+   ++G       +++ AE  T GAVY+L   +G L  A   K+
Sbjct: 962  WDEGNLAVVREGRVLLLEFKEGDAGGGWDIKIKAELATVGAVYALEEIHGFLAVAAGSKL 1021

Query: 530  QLYKWMLRDDGTRELQ-SECGHHGHILAL-------YVQTRGDFIVVGDLMKSISLLIYK 581
             +++    D    EL+ +      ++++        +++  G  IV GD M+S+ +L   
Sbjct: 1022 TIHR---LDHNPVELEETSSWASAYVISSLSVLPPSHIRPEGALIV-GDGMRSVIVLNVD 1077

Query: 582  HEEGAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
              +G I +  R+   + ++A+ +L D  D  + ++   NL T R N          +LE 
Sbjct: 1078 EGDGMIYDDERNMATHGVTALGLLKDKGDGVVISDAYSNLLTYRLNQ---------KLER 1128

Query: 640  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
               + L E V RF+ GSLV      ++  IP V+F T  G +G+I  L       L+ LQ
Sbjct: 1129 AATFGLHEEVTRFQSGSLVPTTTAPEI-IIPDVLFATREGRLGIIGELGTRSSRTLDDLQ 1187

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
             N+ K+ KG G +    WR   +     D   F+DGD ++ FLD
Sbjct: 1188 RNMSKIWKGPGEVGWSNWRRAGSNLVGKDTAGFVDGDFVQKFLD 1231


>gi|328853180|gb|EGG02320.1| hypothetical protein MELLADRAFT_44871 [Melampsora larici-populina
            98AG31]
          Length = 1210

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 191/814 (23%), Positives = 362/814 (44%), Gaps = 102/814 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L PI+D    +L      Q++T  G     SLRI+R+G+ ++E  + +L G    +W+ 
Sbjct: 417  SLAPIIDAKAANLLNTDSPQILTSCGRGSRSSLRILRHGLDVSEIVTSDLPGPPTNVWTT 476

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + DD FD ++++ F++ T +L++   + + E    GF + + T+       N L+Q+ 
Sbjct: 477  KLNDDDLFDRYIILGFLNATLVLSIG--ETIVEVSDTGFLTNSPTISIQQLDKNGLLQIH 534

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +         EWK P G  + V+T+N  QV++   GG L+Y E+  +G L E +
Sbjct: 535  PTGIRHIHLNGG--VTEWKVPAGRKIVVSTSNQRQVVVGLSGGELIYFELDLEGQLNEYQ 592

Query: 211  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
               ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T        +P
Sbjct: 593  EQKEMGSTITTLSLSEVPKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTSVP 651

Query: 269  RSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L  
Sbjct: 652  SSICIAELLDSSIDKNNETLFVNIGLSNGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLR 711

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
                + T V A S R  + Y+    L ++ +    + ++  F++   P+ L       L 
Sbjct: 712  VKVDSKTSVIALSSRTWLNYTYQNMLQFNPLIYDSIDNVHSFSAELCPEGLIGIVGSSLR 771

Query: 381  IGTIDDIQ-KLHIRSIPLGEHPRR----------ICHQEQSRTFAICSLKNQSCAE---- 425
            I TI  +  K+   S+PL   PR+          I  + + RT +  S+K +  AE    
Sbjct: 772  IFTIPKLGIKVKQDSMPLSYTPRKMILDPVTKHVITIESEHRTMS-PSVKAERLAEHKAQ 830

Query: 426  --ESEMHF-------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS- 463
              E + H                    +R+ D      ++   L+  E   S    SF+ 
Sbjct: 831  GLEFDEHIFNDEVLGLPRSEPGQWASCIRISDPLEKTTLTKIELENNEAATSAAIVSFAN 890

Query: 464  -DDSNVYYCVGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
             D       VGT   A+V P       G + VF   ++GK L+L+ + E      ++  F
Sbjct: 891  QDLQGPLLVVGTAKDAFVQPRTCR--NGYLSVFKFTDNGKGLELLHKTEVDDIPTAIIGF 948

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSIS 576
             G+L A I + ++++     D G ++L  +  +     A+  + T+G  ++VGD   SIS
Sbjct: 949  QGRLAAGIGKALRIF-----DLGKKKLLRKVENKTFSAAISSLSTQGPRLLVGDAQDSIS 1003

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE---- 632
              +YK  E  +   A D +  W +   ++D D   G +   N++ V +  +  +DE    
Sbjct: 1004 YAVYKPAENRLLVFADDISPRWTTCATMVDYDTCAGGDRFGNVW-VNRIPKTVSDEVDDD 1062

Query: 633  --------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
                    E+G       +++ +  +HL +        SLV        G    +++  +
Sbjct: 1063 PTGAGIMHEKGYLMGAPHKVKNLVHFHLNDIPTSMEKTSLV-------PGGREVLLYTGL 1115

Query: 678  NGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G +G+ I  L  E   F + L+ ++R  +  + G +H  +R +         KN +DGD
Sbjct: 1116 QGTVGILIPFLSKEDVDFFQTLEMHMRSELPSLVGRDHLAYRGY-----YFPVKNCVDGD 1170

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            + ESF  L  ++  +++  ++ SV ++ K++E +
Sbjct: 1171 MCESFALLPMSKQQQVAAELDRSVSDVLKKIEAV 1204


>gi|145549784|ref|XP_001460571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428401|emb|CAK93174.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1178

 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 178/834 (21%), Positives = 352/834 (42%), Gaps = 129/834 (15%)

Query: 21   KGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
            K  ++ +L+   N   I D  V DL ++G  Q+  C  A    +LR++R+G+ I + A+ 
Sbjct: 385  KLKHLSLLQELNNFSCISDLKVADLAKEGNPQIYICCAAGNRSTLRVLRHGLEITQLANT 444

Query: 81   ELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC 139
             LQ    G+W+L+   +DP   ++V+S+I++T  L + + +++E+    G     QT+  
Sbjct: 445  NLQAKPLGIWTLKERYEDPVHKYIVISYINKT--LVLKIGEKVEQVHDTGLEGTKQTIHV 502

Query: 140  HDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN----VATANASQVLLATGGGH 195
               I +  +Q+ +   R +           K P  Y ++       +N  QV  A  GG 
Sbjct: 503  GTLIDDSQIQILTNGYRHIRKN--------KPPTDYIIDGKVIKGVSNEKQVAFALAGGD 554

Query: 196  LVYLEIG----DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            + Y E+      G L E+   Q++ EI  L++ PI E     +   V + +D ++R+ SL
Sbjct: 555  VYYFELDTTSVSGNLIEITKDQMDNEIKALELGPIEEGRQRCKFLCVAL-SDQTIRLLSL 613

Query: 252  PDLNLITKEHLGGEIIPRSV-LLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
               +   +  +  + +P     LC  E  S            +L   L +G L+   ++ 
Sbjct: 614  EPESCFERGAM--QALPSEAESLCMMEMASEQEGQQSFTKQLFLFIGLNNGLLMRTSVDQ 671

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             +G L+D +   LGT+P+     ++     + A S R  + Y+++ ++    ++   + +
Sbjct: 672  LSGGLSDTRTRYLGTKPVKCLRITANQQQAMLALSSRSWLCYNNSGRIFMQPLSYDYLDY 731

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI----------RSIPLGEHPRRICHQE 408
               F          +AKE +  +GT     ++ +          +S+ L   PR++   E
Sbjct: 732  ASAF----------LAKEFQGIVGTNQSTLRIIMPERFGEIFNQQSLDLTYSPRKMIFHE 781

Query: 409  QSRTFAICSLKNQSC------------------------AEESE-MHFVRLLDDQTFEFI 443
             S+   I    N+S                         AE+ +    +R++D    E +
Sbjct: 782  PSKAIFIIESDNRSYNNIQQKVQEVYQTEELPEQWNQIQAEQYKWASLIRIVDATKLETV 841

Query: 444  STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK----GRILVFIVEDGKL 499
            + +     ++ CSI    F+     Y CVGT   L   NEP++    G I  F+ ++  L
Sbjct: 842  NVHQFYENQHACSICYIQFAGYPEQYICVGTVKDLV--NEPSRKFSQGFIHTFVYDNKTL 899

Query: 500  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW----MLRDDGTRELQSECGHHGHIL 555
            +L          Y+L A+ G+LL      +++Y+     +L+    + L S         
Sbjct: 900  KLKHSTPIDEIPYALAAWRGRLLVGAGCNLRVYEMGNQRILKKAEIKNLNS--------F 951

Query: 556  ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
               +  + D I V ++  SI LL Y   +    E A D    +++A  +LD    +  + 
Sbjct: 952  ITSIMVKEDRIYVAEVADSIHLLRYNIRDQTFMELADDILPRYVTASTVLDYHTVIAGDK 1011

Query: 616  NFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
              N+F  R                  K  +G  +    +++ +  +++GE +   +  +L
Sbjct: 1012 FENIFVSRVPLDIDEEQEEHPYEYKMKMDQGCMNGAPFKMDQICNFYVGEVITSLQKIAL 1071

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQ 716
            V     S+V     V++GT  G I  +    +++ + F   L+  LR   + + G +H Q
Sbjct: 1072 VS--TSSEV-----VVYGTSMGSIAALYPFDNKEDIDFFLHLEMYLRVEHQPLSGRDHMQ 1124

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS     K++     +DGDL + F ++   +   +++  + +  ++ K++E++
Sbjct: 1125 FRSAYGPCKSI-----IDGDLCDQFGNMQYNKQRAVAEEFDRTPADIIKKLEDI 1173


>gi|296814646|ref|XP_002847660.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
 gi|238840685|gb|EEQ30347.1| pre-mRNA-splicing factor rse1 [Arthroderma otae CBS 113480]
          Length = 1235

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 205/834 (24%), Positives = 354/834 (42%), Gaps = 106/834 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + +L  +   Q+ T  G     S
Sbjct: 402  YFRPRPAENLNL-----------VESIASLNPLMSCSIANLTEEDAPQLYTLCGTGARSS 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + + +D +D ++V+SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLTRNDQYDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567  ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL P+  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626  DDSTVRILSLDPESTLENKSVQALTSAPSALSIMSMIDSTSGGPTLYLHIGLYSGIYLRT 685

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
            +L+  TGEL+D +   LG +P+ L   S K    V A S R  + YS  + + ++   L 
Sbjct: 686  VLDEVTGELSDTRTRFLGVKPVKLFGVSVKEQRAVLALSSRSWLGYSDVQTMSFTLTPLN 745

Query: 355  EVS--HMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
             V       F+S    + +   +   L I +I+ +   L   SIPL    R +    +  
Sbjct: 746  YVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQESIPLAYTSRSLVRHPEYP 805

Query: 412  TFAICSLKNQSCAEESEMHFVRLLDDQT-------------FEF---------------- 442
             F +    N   +  ++    +LL + T             F +                
Sbjct: 806  IFYVIGSDNNVLSPSTK---AKLLSESTTVNGDNAELPPEDFGYPRGTNHWASCIQVVDP 862

Query: 443  ------ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-I 493
                  +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++  
Sbjct: 863  INAKAVMSRIELEDNEAAVSIAAVSFTSQEDETFLVVGTGKGMVVSPRSFTCGFIHIYRF 922

Query: 494  VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHH 551
             E+GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C    
Sbjct: 923  QEEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQI 977

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
               + + +QT+G  I+V D+ +S++ ++YK++E  +   A D    W +   ++D +   
Sbjct: 978  TPRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENNLIPFADDIIPRWTTCTTMVDYETVA 1037

Query: 612  GAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
            G +   N++ +R   K SE A ++  G   +    +L    NR    SLV      D   
Sbjct: 1038 GGDKFGNIWLLRCPPKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVAHFYSQD--- 1091

Query: 669  IPTVIFGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
            IPT I  T              + G +G+ I  +  +   F + L+  L      + G +
Sbjct: 1092 IPTSIQKTQLVAGGRDILVWTGLQGTVGMLIPFVTRDDVDFFQTLEMQLTSQNPPLAGRD 1151

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
            H  +R +         K  +DGDL E+F  L   +   I+  ++ SV E+ +++
Sbjct: 1152 HLIYRGY-----YAPCKGVIDGDLCETFFLLPNDKKQAIAGELDRSVREIERKI 1200


>gi|353442065|gb|AER00318.1| xeroderma pigmentosum group E, partial [Hydra vulgaris]
          Length = 156

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 83/154 (53%), Positives = 110/154 (71%), Gaps = 1/154 (0%)

Query: 597 NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGS 656
           NWM+AVEI+DDD +LGAEN+FNLF  +K++    DEER  L+ +G+YHLG+FVN F+HGS
Sbjct: 2   NWMTAVEIIDDDTFLGAENSFNLFICQKDNSSVNDEERHHLQTIGKYHLGDFVNVFKHGS 61

Query: 657 LVMRLPDSDVGQI-PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
           LVM      +  I  ++++GTV G IG++A LP   + FL ++Q  L K IK VG + HE
Sbjct: 62  LVMHHSTEQLTPISSSILYGTVRGAIGLVAGLPKNTFDFLSQVQEKLSKTIKSVGKIEHE 121

Query: 716 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            WRSF N+KKT  A   +DGDLIES LDL+RT+M
Sbjct: 122 FWRSFYNDKKTDLAVGCVDGDLIESCLDLTRTQM 155


>gi|331221690|ref|XP_003323519.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309302509|gb|EFP79100.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 192/816 (23%), Positives = 350/816 (42%), Gaps = 103/816 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L PI       L      Q V   G     SLR++R+G+ ++E  + EL G    +W+ 
Sbjct: 417  SLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTT 476

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R +  D FD ++++ F++ T +LA+   + + E    G  + + T+       N L+Q+ 
Sbjct: 477  RLAETDEFDRYIILGFLNATLVLAIG--ETIVEVADTGLLTNSPTIAIQQLDSNGLLQIH 534

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +         EWK PPG  + V+T+N  QV++   GG L+Y E+  DG L E +
Sbjct: 535  PTGIRHIHLDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEYQ 592

Query: 211  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
               ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T        +P
Sbjct: 593  EQKEMGATITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTAVP 651

Query: 269  RSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L  
Sbjct: 652  TSICIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLR 711

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
                N T V   S R  + Y+    L +  +    + ++  F++   P+ L       L 
Sbjct: 712  VKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLR 771

Query: 381  IGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-----AEESEMHFVR- 433
            I TI  +  K+   ++PL   PR++     S+       ++++      AE   +H  + 
Sbjct: 772  IFTIPKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTMAPGVKAERLALHKAQG 831

Query: 434  ------LLDDQTF-----------------EFISTYPLDTFEYG-------CSILSCSFS 463
                  LLD   F                 + I    L   + G        +I+S +F+
Sbjct: 832  LQVDESLLDQDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNEAATSLAIVSFAFA 891

Query: 464  ---DDSNVYYCVGT---AYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
                 +     VG+   A+V P   +    R+  F+ +   ++L+ + E      +L  F
Sbjct: 892  AHHPATEPLLVVGSAKDAFVQPRTCKNGFLRVYRFVNDGKAIELVHKTEVDEMPSALVGF 951

Query: 518  NGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
             G+L A + + +++Y    K +LR    +   S       I++L VQ  G  I+VGD   
Sbjct: 952  QGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSA------IISLSVQ--GSRILVGDSQD 1003

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATD 631
            S+S  +YK  E  +   A D    W +   ++D D   G +   NL+  R  KN     D
Sbjct: 1004 SVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKNVSDEVD 1063

Query: 632  E---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
            E         E+G       +L+ +  +HL +     +  SLV        G    +++ 
Sbjct: 1064 EDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVP-------GGREVLLYT 1116

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
             V G IG++   +  E   F + L+ ++R  +  + G +H  +R +         KN +D
Sbjct: 1117 GVQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGY-----YFPVKNCVD 1171

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL ESF  L   +  +++  ++ SV ++ K++E +
Sbjct: 1172 GDLCESFALLPSAKQLQVASELDRSVSDVLKKIEAV 1207


>gi|331238007|ref|XP_003331659.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309310649|gb|EFP87240.1| pre-mRNA-splicing factor RSE1 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1213

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 196/817 (23%), Positives = 352/817 (43%), Gaps = 105/817 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L PI       L      Q V   G     SLR++R+G+ ++E  + EL G    +W+ 
Sbjct: 417  SLAPITGAKTGHLLNSDSAQTVASCGTGSRSSLRMLRHGLEVSEIVTSELPGPPTNVWTT 476

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R +  D FD ++++ F++ T +LA+   + + E    G  + + T+       N L+Q+ 
Sbjct: 477  RLAETDEFDRYIILGFLNATLVLAIG--ETIVEVADTGLLTNSPTIAIQQLDSNGLLQIH 534

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
               +R +         EWK PPG  + V+T+N  QV++   GG L+Y E+  DG L E +
Sbjct: 535  PTGIRHIHLDGA--ITEWKVPPGRKIVVSTSNRRQVVIGLSGGELIYFELDLDGQLNEYQ 592

Query: 211  -HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
               ++   I+ L ++ + +    +   A+G+  +++V+I SL P+  L T        +P
Sbjct: 593  EQKEMGATITSLSLSEVSKGRQRTPFLAIGL-ENLTVQIISLDPNSVLETISLQALTAVP 651

Query: 269  RSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             S+ +      S        ++   L +G LL  +L+   G+LTD +   LG++P+ L  
Sbjct: 652  TSICIAELLDSSIDKNSETLFVNIGLANGVLLRTVLDSVNGQLTDTRTRFLGSRPVKLLR 711

Query: 321  FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
                N T V   S R  + Y+    L +  +    + ++  F++   P+ L       L 
Sbjct: 712  VKVDNKTSVIGLSSRTWLNYTFQNLLHFDPLIYDAIDNVHSFSAELCPEGLIGIVGSSLR 771

Query: 381  IGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-----AEESEMHFVR- 433
            I TI  +  K+   ++PL   PR++     S+       ++++      AE   +H  + 
Sbjct: 772  IFTIPKLGVKVKQDAMPLAYTPRKMLLDPSSKHVITIESEHRTMAPGVKAERLALHKAQG 831

Query: 434  ------LLDDQTF-----------------EFISTYPLDTFEYG-------CSILSCSFS 463
                  LLD   F                 + I    L   + G        +I+S +F+
Sbjct: 832  LQVDESLLDQDAFGVPRAEAGKWASCIRISDPIEKTTLVREDLGDNEAATSLAIVSFAFA 891

Query: 464  ---DDSNVYYCVGT---AYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNA 516
                 +     VG+   A+V P   +    R+  F V DGK ++L+ + E      +L  
Sbjct: 892  AHHPATEPLLVVGSAKDAFVQPRTCKNGFLRVYRF-VNDGKVIELVHKTEVDEMPSALVG 950

Query: 517  FNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            F G+L A + + +++Y    K +LR    +   S       I++L VQ  G  I+VGD  
Sbjct: 951  FQGRLAAGVGKALRIYDLGKKKLLRKVENKSFGSA------IISLSVQ--GSRILVGDSQ 1002

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGAT 630
             S+S  +YK  E  +   A D    W +   ++D D   G +   NL+  R  KN     
Sbjct: 1003 DSVSYAVYKPAENRLIVFADDVVPRWTTCATMVDYDTVAGGDRFGNLWVSRLPKNVSDEV 1062

Query: 631  DE---------ERG-------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
            DE         E+G       +L+ +  +HL +     +  SLV        G    +++
Sbjct: 1063 DEDPTGAGIMHEKGYLMGAPHKLKNLVHFHLNDIPTSIQKTSLVP-------GGREVLLY 1115

Query: 675  GTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
              V G IG++   +  E   F + L+ ++R  +  + G +H  +R +         KN +
Sbjct: 1116 TGVQGSIGILVPFISKEDVDFFQTLEMHMRNEMPSLVGRDHLAYRGY-----YFPVKNCV 1170

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL ESF  L   +  +++  ++ SV ++ K++E +
Sbjct: 1171 DGDLCESFALLPSAKQLQVASELDRSVSDVLKKIEAV 1207


>gi|58258783|ref|XP_566804.1| U2 snRNA binding protein [Cryptococcus neoformans var. neoformans
            JEC21]
 gi|338819361|sp|P0CR23.1|RSE1_CRYNB RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|338819362|sp|P0CR22.1|RSE1_CRYNJ RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|57222941|gb|AAW40985.1| U2 snRNA binding protein, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1217

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 206/816 (25%), Positives = 353/816 (43%), Gaps = 102/816 (12%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEGSLSE 595

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTSFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLKNQSCAEES 427
            L I  I  + +KL   S  L   PR+ I H   S         RT++  +++     +ES
Sbjct: 775  LRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 428  E-----------------------MHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
            E                        H+   VR+LD    E I T  LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEAAFSIAIAY 894

Query: 462  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRILEFLHKTKTDDIPLCLAGF 954

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA I + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGIGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 628
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 629  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 675
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQM 1211


>gi|391341057|ref|XP_003744848.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Metaseiulus
            occidentalis]
          Length = 1211

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 186/856 (21%), Positives = 362/856 (42%), Gaps = 122/856 (14%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+ LP++L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFLPRELKNLVL-----------VDEMDSLSPIMTARVADLTNEDTPQLYAACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             ++R++R+G+ ++E A  EL G    +W+++   DD +D ++VVSFI+ T +L++   + 
Sbjct: 433  STMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSFINATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL CH   ++ LVQ+    +R + +  R   NEW++     +    
Sbjct: 491  VEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRR--VNEWRTSGKKLIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG L+Y E+   G L E  +  ++  ++ C+ +  +      ++  AVG
Sbjct: 549  VNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPAGEQRTKFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGG--EIIPRSVLLCAFEGIS--------YLLCALGDG 289
              +D +V + SL   + ++   + G  E  P S+ +    G          YL   L +G
Sbjct: 609  S-SDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVDMSGHEEGSGSSALYLNIGLQNG 667

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS 349
             L   +L+  TG+++D +   LG++ + L     + T  V A S R  + Y    +   +
Sbjct: 668  ILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDAVLAMSSRCWLSYLFQNRFHLT 727

Query: 350  NVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQE 408
             ++   + +   F S   P+ +       L I  ++ +  +  + S PL   PR     +
Sbjct: 728  PLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEKLGAVFNQLSAPLSFTPRSFVIDK 787

Query: 409  QSR------------TFAICSLKNQSCAEE-------------------------SEMHF 431
            +S+            T ++   + Q  AEE                          E  F
Sbjct: 788  KSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEAAGEAEQEMAAELAAAFLSEDLPESQF 847

Query: 432  -------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 478
                         +R+L+      +    L+  E   S+   +F   ++    VG +  L
Sbjct: 848  GAPRAGKKHWASVIRILNPSDLSTVYKIQLEQNEAAVSVALVNFDKSTDPILLVGISKDL 907

Query: 479  ---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
               P E   +       + +  +L+L+          ++  F  ++L  + + +++Y   
Sbjct: 908  QLSPRECRNSFINAYRVVKDCTELELVHTTVMDDVPQAMCNFGNRVLIGVGRCLRIY--- 964

Query: 536  LRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              D G +++  +C  + HI  L + +   G+ IVVGD+ +S   + Y+  E  +   A D
Sbjct: 965  --DFGKKKMLRKC-ENKHIPNLIVTINAVGNRIVVGDVQESFFFIRYRMLENQLIIFADD 1021

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL----- 637
            +   W +A  ++D    +G +   N++ +R   N+    DE         +RG L     
Sbjct: 1022 FTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDEDPTGVRSLWDRGWLGGAGQ 1081

Query: 638  --EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLF 694
              EV+   H+GE +   +  +L+   P++       +++ T+ G +G +      + + F
Sbjct: 1082 KAEVLSMTHVGELIVSLQKTALIPGGPEA-------IVYTTIAGGVGALIPFSSKDDHEF 1134

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
             + L+  +R     + G +H  +RS+    K V     +DGDL E +  L   +  +I+ 
Sbjct: 1135 FQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAV-----IDGDLCEQYNSLDANKQKQIAD 1189

Query: 755  TMNVSVEELCKRVEEL 770
             +     E+ K++E++
Sbjct: 1190 ELERLPHEVAKKLEDI 1205


>gi|392578232|gb|EIW71360.1| hypothetical protein TREMEDRAFT_71141 [Tremella mesenterica DSM 1558]
          Length = 1250

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 196/777 (25%), Positives = 330/777 (42%), Gaps = 101/777 (12%)

Query: 23   SYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE- 81
            + VE++ER++NL P+ DFC V+ +  G   +V  +GA    SLR VR+G+ +     +E 
Sbjct: 468  ATVEMVERWMNLAPVKDFCAVEEDGGGLSHLVVAAGASNTNSLRAVRSGVSLETLMDIEG 527

Query: 82   LQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 141
            +QGI+ MW +   + D    FL  S    T  + + L  E++   +        T+    
Sbjct: 528  VQGIERMWPIMLPSRDQ-GIFLSTS----TSSMLLGLAPEVQALALPESVVNHPTIAA-- 580

Query: 142  AIYNQL-VQVTSGSVRLVSSTSRELR-NEWKSPPGYSVNVATANASQVLLATGGGHLVYL 199
            A + ++ V VT+ +V + S  +  ++   W       +  A  +     +A  GG LV L
Sbjct: 581  ASWEEVAVIVTANNVTVWSDLTGSVKVGSWSHGQSRQILAAQISGGLAAIAISGGELVIL 640

Query: 200  EIG----DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLN 255
            ++     D ILT     QL  EI+ + I         S I     WT+  + +F+L  L 
Sbjct: 641  QVSAHGVDAILTR----QLGGEIASVAI-----LDGLSPIVVTSTWTN-EIFLFTLDQLR 690

Query: 256  LITKEHLGGEIIPR-----SVLLCAFEGISYLLCALGDGHLLNFLLNMKTG---ELTDRK 307
                  + G  I       S+ LC   G + LL  L DG ++ + +        EL++RK
Sbjct: 691  ---SPDMQGSTIRENSFCASLQLCPLSGGARLLAGLSDGTMVTYHIESSANNALELSERK 747

Query: 308  KVSLGTQPITLRTFS---SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS 364
             VSLGTQP+ L   S     +       S+R  VI  S +++  S+VN  +       N+
Sbjct: 748  AVSLGTQPLRLSPTSLSCGDDRIISVGLSERMCVISESRERIESSSVNRNDTRAAATINT 807

Query: 365  AAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 424
             +    LA+A    +++     ++K+H+R++ LG       H+  SR   I  LK  +  
Sbjct: 808  PSHGSCLALATSSGISLVKPTSLKKVHVRTLDLG-------HRSVSRLTNISPLKAIAAG 860

Query: 425  --------EESEMH---FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG 473
                    E  E+H   +V L D  T E +   PL++ E   +I   +  D +     VG
Sbjct: 861  STERPFDRETGEIHQSSYVELRDSTTLELLVEKPLESREIVTTIAYVTLGDQN--LLAVG 918

Query: 474  TAYVLPEENEPTKGRILVFI-VEDGKLQL---IAEKET-------------KGAVYSLNA 516
             A    ++ +      +V I  + G+L L   + ++++             + AV  +  
Sbjct: 919  IATFSEDDEDLPDDLDMVTISAQSGRLVLYEPVVDQDSAEPNLIELTSVGLESAVNDIKV 978

Query: 517  FNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILA----LYVQTRGDFIVVG 569
                L  A    + +YK          T    S       ++A    L+ + R   +VVG
Sbjct: 979  IKNLLAVATGSNVTIYKHEKASHLLIPTSRFASAFVAKSLVVAPPDKLHPEER---LVVG 1035

Query: 570  DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD----IYLGAENNFNLFTVRKN 625
            D M+SI +L      G I    RD   + + A+E L D     I   A +N + F +R+ 
Sbjct: 1036 DGMRSIFVLDIDEGTGMIMGDERDMATHSVMAMEGLRDGGQAVIVADAHSNISTFRLREE 1095

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
                       +E    + L E ++ FR GSL       DV   P +IF T++G +G++ 
Sbjct: 1096 -----------IETAATFGLHEDISVFRRGSLAPASSAEDVLS-PEIIFATIDGRLGIVG 1143

Query: 686  SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
             L       L+ LQ N+ + I+G G +    +R    E    D   F+DGD +++++
Sbjct: 1144 ELTPSAARTLDDLQRNMDRYIRGPGDIAWRSYRRAGTELVQRDTAGFIDGDFVQTYI 1200


>gi|405117821|gb|AFR92596.1| pre-mRNA-splicing factor RSE1 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1217

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 205/816 (25%), Positives = 353/816 (43%), Gaps = 102/816 (12%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 420  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 479

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ + DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 480  TLKLTEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 537

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 538  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSE 595

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 596  YQEKKALPGNATCVTIAEVPEGRRRTPFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 654

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 655  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 714

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 715  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 774

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLKNQSCAEES 427
            L I +I  + +KL   S  L   PR+ I H   S         RT++  +++     +ES
Sbjct: 775  LRIFSIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 834

Query: 428  E-----------------------MHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
            E                        H+   VR+LD    E I T  LD  E   SI    
Sbjct: 835  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEAAFSIAIAY 894

Query: 462  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 895  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGF 954

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA + + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 955  QGFLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1009

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 628
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1010 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1065

Query: 629  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 675
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1066 VDDDPTGATILHEKSFLMGAAHKTEMIAHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1120

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T++G +G +   +  +   F+  L+ ++R       G +H  +R +      V  K  +D
Sbjct: 1121 TISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISPVGRDHIAYRGY-----YVPIKGVVD 1175

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1176 GDLCESFSLLPYPKQQAIATDLDRSVGDVLKKLEQM 1211


>gi|242018509|ref|XP_002429717.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
 gi|212514723|gb|EEB16979.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
          Length = 1218

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 196/867 (22%), Positives = 374/867 (43%), Gaps = 137/867 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L +Q D   S          L PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFAPRALRNL-VQVDEMDS----------LSPIMACQVADLANEDTPQLYMLCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W+++   ++ +D +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVEEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIMKCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A   G LVY E+   G L E  +   +  ++SC+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTAGELVYFEMDPTGQLNEYTERKAMPSDVSCMALGNVVPGELRSRFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-GIS----------------Y 281
            +  D +VRI SL   + ++   L  + +P +   LC  E G +                Y
Sbjct: 609  L-ADNTVRIISLDPSDCLSP--LSMQALPAAAESLCIVEMGAADKKPDSEESTVTQSNLY 665

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL  +L+  TG+L D +   LG++P+ L     + +  V A S R  + Y 
Sbjct: 666  LNVGLQNGVLLRTVLDPVTGDLADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRSWLSYY 725

Query: 342  SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
               +   + ++ + + +   F+S   P+ +       L I  ++ +  +  + S PL   
Sbjct: 726  YQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLEYT 785

Query: 401  PRR-ICH--------------------QEQSRTFAICSLKNQSCAEESEM---------- 429
            PR+ + H                    ++Q R      ++  +  EE E+          
Sbjct: 786  PRKFVVHPETGKMILLETEHNAYTEETKKQRRVQMAEEMQEAAGDEEQELAKEMAEAFLS 845

Query: 430  -------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVY 469
                                 +R++D           L+  E   SI    F++   +++
Sbjct: 846  EDLPESIFGAPKAGSGMWASIIRIIDPVEGRTDKIVRLEQNEAALSIALVKFNNHPESLF 905

Query: 470  YCVGTA--YVLPEENEPTKGRILVF-IVED-GKLQLIAEKETKGAVYSLNAFNGKLLAAI 525
              VG    Y L    + + G +  F I ED   L+L+ +     A  ++  ++G+LL  +
Sbjct: 906  LVVGVVKEYQL-SPRQVSFGYLYTFRINEDVTDLELVHKTTVDEAPAAVCPYHGRLLVGV 964

Query: 526  NQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
             + ++LY     D G ++L  +C +      I+++     G  + V D+ +S+ ++ YK 
Sbjct: 965  GRMLRLY-----DLGKKKLLRKCENKYIPNQIVSICAT--GQRVFVSDVQESVYMVRYKR 1017

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNS--EGATDE-------- 632
            +E  +   A D +  W++   ILD D    A+   N+  +R +S      DE        
Sbjct: 1018 QENQLIIFADDTHPRWITCTTILDYDTVATADKFGNIAIIRLSSIITDDVDEDPTGNKAL 1077

Query: 633  -ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
             +RG L       +V+  +H+GE     +  +L+        G   ++++ +++G +GV+
Sbjct: 1078 WDRGLLNGASQKADVLANFHVGETCMSLQKATLI-------PGGSESLVYTSLSGTVGVL 1130

Query: 685  ASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
                  E + F + L+ ++R     + G +H  +RS+         KN +DGDL E +  
Sbjct: 1131 VPFTSREDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVKNVIDGDLCEQYNS 1185

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEEL 770
            +   +   I++ ++ +  ++ K++E++
Sbjct: 1186 IEPAKQKSIAEDLDRNPSDVSKKLEDI 1212


>gi|406602265|emb|CCH46158.1| Pre-mRNA-splicing factor [Wickerhamomyces ciferrii]
          Length = 1123

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 181/763 (23%), Positives = 337/763 (44%), Gaps = 70/763 (9%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWSLRSS 94
            P++D  +V+       ++ + SG     SL+I++ G+ INE    +L GI   +W+ + +
Sbjct: 398  PLIDSKLVN--DDAFTKIYSLSGVKDSSSLKILQYGLSINEIVESDLPGIANKVWTTKLN 455

Query: 95   TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
             +D FD +LV+SF+  T +L++   + +EE    G     +T+       N LVQ+ S  
Sbjct: 456  KNDEFDKYLVISFMDTTLVLSIG--ENVEEITDSGLALNEETIGIQQIGINSLVQIHSNG 513

Query: 155  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG--ILTEVKHA 212
            +R + +   EL NEW+ P G  +   +    Q+ +      LVY E+ D   ++   +  
Sbjct: 514  IRNIKNG--ELINEWQPPAGIKILTTSTTNRQIAIGLSNDELVYFEVDDRDRLIEYNERK 571

Query: 213  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL---PDLNLITKEHLGGEIIPR 269
            +L   I  L +  I E    S    VG   D ++R+ S      L L++ + L    IP 
Sbjct: 572  ELTSRIVSLSLGDIPEGRLRSPFLIVG-CQDSTIRVLSTDPGSTLELLSLQALSS--IPF 628

Query: 270  SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 329
             +L  +     ++   L +G  +  L++ + G+L+D +   LG +P++L   S      V
Sbjct: 629  DILTLSMNNQLFVNIGLENGVYVRTLIDEQNGQLSDTRIKYLGNKPVSLSKISISGVNVV 688

Query: 330  FAASDRPTVIY-SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ 388
             A S++  +++ + N     +++ +  +     FNS    D +    +  L I TIDD+ 
Sbjct: 689  LAFSNKTWIVHETKNSTFKINSLLINPLKFGFMFNSEDCIDGIVGVYKKNLIIFTIDDLD 748

Query: 389  K-LHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYP 447
               +I SI L   P+ +    Q     I   +N S      + F+   D Q  E   +  
Sbjct: 749  NDFNINSIQLKTTPKNLLKNNQD----IFITQNSSS-----LGFIEKFD-QELELNKSIQ 798

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI-VEDGKLQLIAEKE 506
            L   E   +     F   S  Y  V  +       +   G    FI   D +L LI   +
Sbjct: 799  LSESETIITSTIVKFESKSTSYLLVSIS------KKHDNGSNEFFINTYDLELNLIHITK 852

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA--LYVQTRGD 564
                 Y++  F GK+L  I+  ++L+     D G ++L S+       ++  + ++T+G 
Sbjct: 853  ISDIAYAITEFQGKVLIGISNHLRLF-----DMGLKQLLSKANSKIDTISKIVKIETQGY 907

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
             +VVGD+ +SI+ L+YK +         D     ++++++LD +  +G +   NLF +R 
Sbjct: 908  RVVVGDIRESITFLVYKPKSNEFLTFTDDILPRHITSIKMLDYNTVIGGDKFGNLFILRA 967

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGS--LVMRLPDSDVGQIPT----------- 671
            + E +   +     ++ +       ++F +G+   +M L +  +  IPT           
Sbjct: 968  SEESSKISDTNSTFLITK-------DKFLNGAPFKLMNLCNFFIEDIPTSFAKGSFTIGG 1020

Query: 672  ---VIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               +I+  + G +G +I  L      F   L+  +R     + G  + ++R +       
Sbjct: 1021 KDLIIYTGLQGTVGALIPLLTKSDIKFFINLEKQMRLHKPDLLGRMNLKYRGYYQP---- 1076

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              KN +DGDLIE F  LS +   EIS  ++ +  E+ K+++E+
Sbjct: 1077 -VKNVIDGDLIELFNTLSESTKVEISNELDKTPREISKKIDEI 1118


>gi|302406266|ref|XP_003000969.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
 gi|261360227|gb|EEY22655.1| pre-mRNA-splicing factor rse-1 [Verticillium albo-atrum VaMs.102]
          Length = 1059

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 170/634 (26%), Positives = 290/634 (45%), Gaps = 68/634 (10%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            ++E   ++ P++D  V +L  +   Q+ T  G     + RI+++G+ +NE  + EL GI 
Sbjct: 416  LVESIDSMNPLIDCKVANLTGEDAPQIYTACGNGARSTFRILKHGLEVNEIVASELPGIP 475

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+L+ S  D +D ++V+SF + T +L++   + +EE    GF +   TL        
Sbjct: 476  SAVWTLKLSRGDQYDAYIVLSFTNATLVLSIG--ETVEEVNDSGFLTSVPTLAAQLLGGE 533

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R + +      NEW +P   S+  AT N  QV +A   G +VY E+  DG
Sbjct: 534  GLIQVHPKGIRHIRNGQV---NEWAAPQHRSIVAATTNEHQVAVALSSGEIVYFEMDSDG 590

Query: 205  ILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    +  +  ++CL +  + E    S   AVG   D +VR+ SL P+  L +K   
Sbjct: 591  SLAEYDEKKEMFGTVTCLSLGEVPEGRLRSSFLAVGC-DDSTVRVLSLDPETTLESKSVQ 649

Query: 263  GGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                 P S+ + A E  S      YL   L  G  L  +L+  TGELTD ++  LG +P+
Sbjct: 650  ALTAPPTSLAVIAMEDSSSGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPV 709

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             L   + +  T V   S RP + Y+    K  + + +N  ++     F+S    + +   
Sbjct: 710  KLFQVTVQGRTCVLGLSSRPWLGYADPITKGFVVTPLNYVDLEWGWNFSSEQCEEGVVGI 769

Query: 375  KEGELTIGTIDDIQ-KLHIRSIPLGEHPRRIC-HQEQSRTFAICS--------LKNQSCA 424
            +   L I  I+ +   L  +SIPL   PRR+  H E    + I S        L+ Q  A
Sbjct: 770  QGQSLRIFAIEKLSDTLTQKSIPLTYTPRRMVKHPEHPMFYTIESDNNTLPPELRAQLLA 829

Query: 425  EES------------EMHFVR----------LLD--DQTFEFISTYPLDTFEYGCSILSC 460
            + S            E  + R          ++D   +  + + T  LD  E   S    
Sbjct: 830  DPSVVNGDARTLPPVEFGYPRAKGRWASCISVIDPLSEELQTLQTVDLDNNEAAVSAAIV 889

Query: 461  SF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNA 516
             F S D+  +  VGT   ++    + T+G I ++   EDG+ L+ I + + +    +L A
Sbjct: 890  PFTSQDNESFLVVGTGKDMIVNPRQFTEGYIHIYRFSEDGRELEFIHKTKVEEPPTALLA 949

Query: 517  FNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLM 572
            F G+L+A + + +++Y    K ML     R+ Q++       L + + T+G  IVVGD+ 
Sbjct: 950  FQGRLVAGVGKTLRIYDLGQKQML-----RKAQADVAPQ---LIVSLSTQGSRIVVGDVQ 1001

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            + ++ ++YK     +     D  A WM+   ++D
Sbjct: 1002 QGVTYVVYKALSNKLIPFVDDTVARWMTCTTMVD 1035


>gi|313235544|emb|CBY10999.1| unnamed protein product [Oikopleura dioica]
          Length = 1185

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 190/828 (22%), Positives = 362/828 (43%), Gaps = 92/828 (11%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L  +             +L P+++  V DL  +   Q+    G    
Sbjct: 384  TFFFTPRGLRNLALTDEMD-----------SLSPVLNCEVADLANEDTPQLYVTCGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++++S D   D++++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVKTSADADHDSYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL       + LVQ+    +R + S  R   NEW++P    +    
Sbjct: 491  VEEITDSGFLGTTPTLSSGLMGEDALVQIYPEGIRHIRSDRRV--NEWRAPDRKQIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG +VY E+   G L E  +  +   EI  LD+  +       +  AVG
Sbjct: 549  CNRQQVVIALTGGEIVYFEMDPTGQLNEYTERREFGSEIIALDVGDVPAGEQRCRFLAVG 608

Query: 240  MWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 298
            + +D +VRI SL P+  L  +       +P+ V +   +G   L   L +G LL   ++ 
Sbjct: 609  L-SDGTVRIISLDPNDCLQPRTMQALPTVPQDVAITEHKGQYVLQIGLQNGVLLRTTIDS 667

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
             TGE++D +   LGT+ + L    ++    V A S R  + Y   ++   + ++ + +  
Sbjct: 668  VTGEISDTRTRYLGTKAVKLYKVVTEGENSVLAVSSRSWLSYRHQQRFHLTPLSYEALDS 727

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL--HIRSIPLGEHPRRICHQEQSRTFAIC 416
               F+S   P+ +       L I  ++ +  +   +R+ PL   PR+      +    I 
Sbjct: 728  ATGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVRN-PLQLTPRKFVIHPDTANLVIA 786

Query: 417  ---------SLKNQSCAEESEMHFVR-LLDDQTF-----------EFISTYPLDT----- 450
                       K Q  A E    F++  L +  F             IS    +T     
Sbjct: 787  ESDHNAFTEETKKQPLAAEMAAAFLKEELPESDFGSPRAGQGMWASKISIISPETGGTLH 846

Query: 451  ---FEYGCSILSCSFSDDSNV-----YYCVGTAYVL---PEENEPTKGRILVFIVEDG-K 498
                E G  I S   +   +V     Y  VGT+  +   P +++   G + V+ +  G +
Sbjct: 847  HVWLEQGQGIHSMCLTKFQSVGMIDWYLLVGTSNSMILNPRQSQ--GGSLHVYRIHAGER 904

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHI 554
             + +    T+ A  ++  F G++L  +   +++Y    K MLR    R + +        
Sbjct: 905  FEYLHTTYTEDAPTAITPFQGRVLIGVGNLLRIYDLGKKKMLRKCELRSIPNRVTK---- 960

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
                + T G  I+  D  +S   + Y+ +E  +   A D    W++A  +LD    + A+
Sbjct: 961  ----IITAGQRIIAFDQQESAFFIKYRVKENQLTIFADDTFPRWVTAACMLDYWTVVIAD 1016

Query: 615  NNFNLFTVR---KNSEGATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
               ++  +R   + +E   D+  G      R  + G     E +N F  G ++  +  + 
Sbjct: 1017 KFGSVSVIRLPAETNENTQDDPSGAKALWSRGNLNGASQKAETLNNFFVGDMITSIQKTI 1076

Query: 666  V--GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 722
            +  G    +++ T++G IG++     +E   F + L+ ++R+    + G +H  +R +  
Sbjct: 1077 LIPGGGECIVYATMSGRIGILVPFASNEDADFFQSLEMHMRQEHTFLTGRDHLAFRGYYY 1136

Query: 723  EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +K++     +DGDL E+F  L + +   I++ M+  + E+ K++E++
Sbjct: 1137 PQKSI-----VDGDLCEAFSLLGQDQQKGIAEEMDRQLAEVSKKLEDI 1179


>gi|156406895|ref|XP_001641280.1| predicted protein [Nematostella vectensis]
 gi|156228418|gb|EDO49217.1| predicted protein [Nematostella vectensis]
          Length = 1171

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 204/856 (23%), Positives = 360/856 (42%), Gaps = 162/856 (18%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L        V+ LE   +L PI++  + DL  +   Q+    G    
Sbjct: 384  TFFFQPRGLKNLVL--------VDELE---SLAPIMNCQIADLANEDTPQLFAACGRGSR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             SLR++R+G+ ++E A  EL G    +W+++ +T D FD ++VVSFI+ T +L++   + 
Sbjct: 433  SSLRVLRHGLEVSEMAVSELPGNPNAVWTVKHTTADEFDAYIVVSFINATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C       LVQ+    +R + +  R   NEWK+P   ++  + 
Sbjct: 491  VEEVTDSGFLGTTPTLSCSQLGEEALVQIYPDGIRHIRADKR--VNEWKAPGKKTIVKSA 548

Query: 182  ANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG +VY E+   G L E  +  ++  ++ C+ +  I      S+  A+G
Sbjct: 549  VNERQVVIALTGGEVVYFEMDSSGQLNEYTERKEMSADVQCMALGTILHGELRSRFLAIG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 298
            + +D +VRI SL   + +T   +     +P S  LC  E           G +    LN+
Sbjct: 609  L-SDNTVRIISLDPQDCLTPLSMQALPAMPES--LCIVEMGGKEGAESEGGSMGGLFLNI 665

Query: 299  KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
               E      + L  +P             V A S R  + Y+   ++  + ++ + + +
Sbjct: 666  GLSE------ICLTLEP-----------GEVLAMSSRSWLSYTHQSRVHLTPLSYETLEY 708

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICS 417
               F+S   P+ +       L I  ++ +  +  + + PL   PR+      + T  +  
Sbjct: 709  ASGFSSEQCPEGIVAIAGNTLRILALEKLGAVFNQVATPLKYTPRKFVIHSPTNTLVVIE 768

Query: 418  L------------KNQSCAEE-------------------------SEMHF--------- 431
                         + Q  AEE                         SE  F         
Sbjct: 769  TDHNTYTDAAREERKQQMAEEMVEMASEEEKELAAQAAAEFLSEELSEQQFGSPKAGTGM 828

Query: 432  ----VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS---DDSNVYYCVGTAYVLP-EENE 483
                +R+LD    E      LD  E   S+  CSFS   DD+  +  VGTA  +      
Sbjct: 829  WASVIRVLDPIKGETHDVVQLDQNEAAFSVCVCSFSARPDDT--FVIVGTAKDMALSPRS 886

Query: 484  PTKGRILVF-IVEDG----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KW 534
             + G +  + +V+      KL+   + E      +L  F G+LLA I + +++Y    K 
Sbjct: 887  CSTGYLYAYRLVQQPSGGIKLEFQHKTEVDDVPAALEPFQGRLLAGIGRLLRVYDIGKKK 946

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 594
            MLR    ++L +            + + G  IVV D+ +S   + YK  +  +   A D 
Sbjct: 947  MLRKCENKKLPN--------FICNINSMGTRIVVSDIQESFHFVKYKPRDNQLVVFADDV 998

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERG------- 635
            N  W++    LD D   GA+   N+FTVR  S G++D+            +RG       
Sbjct: 999  NPRWLTCCCYLDYDTLAGADKFGNIFTVRLPS-GSSDDVDEDPTGTKAFWDRGLLNGAQQ 1057

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLF 694
            +LE +  Y +GE V   +  +L+        G   +++F T++G +G++      E   F
Sbjct: 1058 KLETMCNYFVGETVLSLQKATLI-------PGGSESLVFTTLSGGVGMLVPFTSREDIDF 1110

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
             + L+ +LR                  +E+ ++   + +DGDL E +  L  ++   I++
Sbjct: 1111 FQHLEMHLR------------------SEQPSL---SVVDGDLCEHYNSLDYSKRRTIAE 1149

Query: 755  TMNVSVEELCKRVEEL 770
             ++ +  E+ K++E++
Sbjct: 1150 ELDRTPAEVSKKLEDI 1165


>gi|403370717|gb|EJY85226.1| Spliceosomal protein sap, putative [Oxytricha trifallax]
          Length = 1203

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 200/829 (24%), Positives = 363/829 (43%), Gaps = 108/829 (13%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-Q 83
            ++ ++ + NL  I D  V DL  +G  Q+   SG    G LR++R+G+ I E+A   + Q
Sbjct: 395  LQAVDEFPNLASINDMKVEDLTGEGNPQIYLASGRGAQGCLRVLRHGLTIIEKAVTAMPQ 454

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
                + +++  T D FD +++VSF  +T +L++  ++++ E +  GF    +TL      
Sbjct: 455  KPLNVITVKGKTTDVFDKYMIVSFQQQTLVLSIG-QEKVSEVKDSGFVDNERTLHVGILE 513

Query: 144  YNQLVQVTSGSVRLVSSTSR-ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
             N  +QVT  S+  V    +   R +W S  G  V  A +N  QV ++  GG +VY E+ 
Sbjct: 514  DNSYIQVTPKSIIHVKGDQQNRKRAKWDSGQGKIVK-ACSNQRQVAVSIEGGQIVYFELD 572

Query: 203  D--GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLI 257
            +  G L EV+    + E++C+DI  + E     +  AVG + D +V+I SL P+  L  I
Sbjct: 573  EMSGTLNEVESRFYDSEVACIDIADVPEGRQRCRFLAVG-YADKTVKIMSLDPESCLQRI 631

Query: 258  TKEHLGGEIIPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKV 309
            + + L     P SV L +F+           +L   L +G LL  L++  TG L+D +  
Sbjct: 632  SMQALPAH--PESVALISFQRDEVAQQQQQLFLHVGLVNGVLLRTLVDNVTGVLSDSRTR 689

Query: 310  SLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLKEVSHMCPFNSAAF 367
             LGT  I+L      NT  + A  ++P + Y+  S  K+  + ++ + +     F S   
Sbjct: 690  FLGTNSISLAKVRQGNTNALVALCNKPWLCYTHMSTNKVNITPLSYEMLEVASSFCSEKC 749

Query: 368  PDSLAIAKEGE-LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA- 424
            PD   +A  G  L I T++ + +    + +PL   P +I    ++    I    + S + 
Sbjct: 750  PDGGIVAISGNTLRIITVERLGENFTHKVMPLRYTPTKIQIHRETNYLVILEKDHNSYSY 809

Query: 425  ----------------------EESEMHFVRLLDDQ---TFEFISTYPLDTFEY------ 453
                                  +ES + + R   ++       +  Y L T E       
Sbjct: 810  SERLRMKEEIAKNTEDENYLALDESRISYPRAGQNKFASCIRIVDPYLLQTLELIEFENN 869

Query: 454  ---GCSILSCSFSDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKET 507
                   ++ +  +    +  +GTA  V  +    + G I  +  V +G+ LQL+     
Sbjct: 870  EVVFSHFIATTLGNPGETHLILGTALNVTFQPRSCSVGFIKTYKFVNNGQSLQLMHSTPC 929

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRG 563
            +    + N + G+L+A +   +++Y    K +LR    +  Q+          + +Q   
Sbjct: 930  EDIPMAFNEYKGRLIAGVGPILRIYELGQKKLLRKVENKNFQAPI--------IQIQVDE 981

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 623
              I  GDL +S+ +L YK E+  +   + D    W+++  +LD D   G +   N+F  R
Sbjct: 982  GRIYAGDLQESVHVLKYKPEDVQLYIFSDDILNRWLTSFCLLDHDTIAGVDKFENVFINR 1041

Query: 624  ------------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL-VMRLPDS 664
                              K   G  +    +++ + ++  GE     +  SL  +   +S
Sbjct: 1042 LPVGCEDDAEDDPTATKFKWENGYLNGAAFKMDPICQFFTGEVGTCIQKCSLNTLSGTNS 1101

Query: 665  DVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
            ++     ++FGT +G +G  A LP    E+  F   L+  LR   + + G +H  +RS  
Sbjct: 1102 EI-----ILFGTTSGSLG--ALLPFETREEIDFFVHLEMYLRIEAQPLCGRDHVTFRS-- 1152

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                 V  K+ +DGDL E F  L   +   +++ M+ +  E+ K++E +
Sbjct: 1153 ---SYVPVKDVVDGDLCEQFASLEFNKQRVLAEEMDRTPPEVMKKLENM 1198


>gi|401883281|gb|EJT47496.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 2479]
          Length = 1216

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 196/811 (24%), Positives = 346/811 (42%), Gaps = 92/811 (11%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI+D  VV+L        Q+    G     + R +++G+ IN      L G+   +W
Sbjct: 419  SLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDINVLVESPLPGVPNAVW 478

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ S DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 479  TLKLSEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGSAGLLQ 536

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +P G ++  AT N +QV++A     LVY E+  +G L E
Sbjct: 537  VHPAGLRHIRAADRV--DEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNE 594

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 595  YQERKSLPGNATCVSIADVPEGRRRTPYLAVGC-DNQTVHIISLEPDNTLETLSLQALTA 653

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P  + L      S        +L   L +G LL  +++   G L+D +   LG++P  +
Sbjct: 654  PPSDICLAEIFDTSIDKNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRI 713

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               +   +  V A S R  ++Y+    L    +    + + C  ++A  PD L       
Sbjct: 714  VRSAVHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNT 773

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------AICSLKNQSCAEESEMH 430
            L I TI  +  KL   S+PL   PR+      +  F        + S +    A E +  
Sbjct: 774  LRIFTIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEEKKR 833

Query: 431  -----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                                          +R++D      + T  LD  E   S+  C 
Sbjct: 834  EGDEKALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQTLELDEDEAAFSLAVCY 893

Query: 462  FSD-DSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
            F          VGT     ++P+  +    R+     E  +L+ + + +T     ++ AF
Sbjct: 894  FERMGGEPSLVVGTGVKTTLMPKGCKEGWLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAF 953

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA + + ++LY+      G + L  +C ++G    +  +   G  I+VGDL +S  
Sbjct: 954  QGYLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTGVATINVVGARIIVGDLQESTF 1008

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
              +Y+    +I  R     A D    +++AV  +D D    A+   N+F  R   + SE 
Sbjct: 1009 YCVYR----SIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNRLEERVSEK 1064

Query: 629  ATDEERGRL------EVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGV 680
              D+  G +       ++G  +  + +  +  GS+V  L    V  G    V++ T++G 
Sbjct: 1065 VDDDPTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVVVYTTISGA 1124

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            +G +   + ++   F+  L+ ++R +   + G +H  +R +    K V     +DGDL E
Sbjct: 1125 VGALVPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAV-----VDGDLCE 1179

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            SF  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1180 SFNMLPYPQQQAIAADLDRNVGEVLKKLEQL 1210


>gi|391341059|ref|XP_003744849.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Metaseiulus
            occidentalis]
          Length = 1223

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 188/868 (21%), Positives = 364/868 (41%), Gaps = 134/868 (15%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+ LP++L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384  TFFFLPRELKNLVL-----------VDEMDSLSPIMTARVADLTNEDTPQLYAACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             ++R++R+G+ ++E A  EL G    +W+++   DD +D ++VVSFI+ T +L++   + 
Sbjct: 433  STMRVLRHGLEVSEMAVSELPGNPSAVWTVKKRADDEYDAYIVVSFINATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL CH   ++ LVQ+    +R + +  R   NEW++     +    
Sbjct: 491  VEEVTDSGFLGTTPTLACHQIGHDALVQIYPEGIRHIRADRR--VNEWRTSGKKLIVKCA 548

Query: 182  ANASQVLLATGGGHLVYLEI-GDGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG L+Y E+   G L E  +  ++  ++ C+ +  +      ++  AVG
Sbjct: 549  VNQRQVVIALTGGELIYFEMDSSGQLNEYAERKEMNSDVLCMALGSVPAGEQRTKFLAVG 608

Query: 240  MWTDISVRIFSLPDLNLITKEHLGG--EIIPRSVLL-----CAFEGIS------------ 280
              +D +V + SL   + ++   + G  E  P S+ +     C    IS            
Sbjct: 609  S-SDGTVHVISLDPKSCLSILSVQGMTESNPESLAIVELKACFLPSISVDMSGHEEGSGS 667

Query: 281  ---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPT 337
               YL   L +G L   +L+  TG+++D +   LG++ + L     + T  V A S R  
Sbjct: 668  SALYLNIGLQNGILKRMVLDAVTGDMSDTRTRFLGSRSVKLFKIKMQGTDAVLAMSSRCW 727

Query: 338  VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIP 396
            + Y    +   + ++   + +   F S   P+ +       L I  ++ +  +  + S P
Sbjct: 728  LSYLFQNRFHLTPLSYDSLEYASGFCSEQCPEGIVAIAGNTLRILALEKLGAVFNQLSAP 787

Query: 397  LGEHPRRICHQEQSR------------TFAICSLKNQSCAEE------------------ 426
            L   PR     ++S+            T ++   + Q  AEE                  
Sbjct: 788  LSFTPRSFVIDKKSQKLIVIETDHNAYTDSVKEKRKQHVAEEMIEAAGEAEQEMAAELAA 847

Query: 427  -------SEMHF-------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 466
                    E  F             +R+L+      +    L+  E   S+   +F   +
Sbjct: 848  AFLSEDLPESQFGAPRAGKKHWASVIRILNPSDLSTVYKIQLEQNEAAVSVALVNFDKST 907

Query: 467  NVYYCVGTAYVL---PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLA 523
            +    VG +  L   P E   +       + +  +L+L+          ++  F  ++L 
Sbjct: 908  DPILLVGISKDLQLSPRECRNSFINAYRVVKDCTELELVHTTVMDDVPQAMCNFGNRVLI 967

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGDLMKSISLLIYK 581
             + + +++Y     D G +++  +C  + HI  L + +   G+ IVVGD+ +S   + Y+
Sbjct: 968  GVGRCLRIY-----DFGKKKMLRKC-ENKHIPNLIVTINAVGNRIVVGDVQESFFFIRYR 1021

Query: 582  HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDE------- 632
              E  +   A D+   W +A  ++D    +G +   N++ +R   N+    DE       
Sbjct: 1022 MLENQLIIFADDFTPRWTTAACMVDYRTVVGGDKFGNVYILRLPGNTSDDVDEDPTGVRS 1081

Query: 633  --ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV 683
              +RG L       EV+   H+GE +   +  +L+   P++       +++ T+ G +G 
Sbjct: 1082 LWDRGWLGGAGQKAEVLSMTHVGELIVSLQKTALIPGGPEA-------IVYTTIAGGVGA 1134

Query: 684  IASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
            +      + + F + L+  +R     + G +H  +RS+    K V     +DGDL E + 
Sbjct: 1135 LIPFSSKDDHEFFQHLEMYMRTEHPPICGRDHLSFRSYYFPVKAV-----IDGDLCEQYN 1189

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEEL 770
             L   +  +I+  +     E+ K++E++
Sbjct: 1190 SLDANKQKQIADELERLPHEVAKKLEDI 1217


>gi|406698009|gb|EKD01256.1| U2 snRNA binding protein [Trichosporon asahii var. asahii CBS 8904]
          Length = 1216

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 195/811 (24%), Positives = 346/811 (42%), Gaps = 92/811 (11%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI+D  VV+L        Q+    G     + R +++G+ +N      L G+   +W
Sbjct: 419  SLDPILDAQVVNLLGNASDTPQIYAACGRGPRSTFRSLKHGLDVNVLVESPLPGVPNAVW 478

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ S DD +D+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 479  TLKLSEDDEYDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGSAGLLQ 536

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +P G ++  AT N +QV++A     LVY E+  +G L E
Sbjct: 537  VHPAGLRHIRAADRV--DEWNAPAGTTIVSATTNKNQVVIALSTQELVYFELDEEGSLNE 594

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 595  YQERKSLPGNATCVSIADVPEGRRRTPYLAVGC-DNQTVHIISLEPDNTLETLSLQALTA 653

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P  + L      S        +L   L +G LL  +++   G L+D +   LG++P  +
Sbjct: 654  PPSDICLAEIFDTSIDKNRATMFLTIGLLNGVLLRTVVDPVDGSLSDTRLRFLGSKPPRI 713

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               +   +  V A S R  ++Y+    L    +    + + C  ++A  PD L       
Sbjct: 714  VRSAVHGSPAVMAFSSRTWLLYTYQDLLQTQPLIYDMLEYACNLSAAMCPDGLIGISGNT 773

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------AICSLKNQSCAEESEMH 430
            L I TI  +  KL   S+PL   PR+      +  F        + S +    A E +  
Sbjct: 774  LRIFTIPRLGTKLKQDSMPLSYTPRKFVSYPYNTVFYGIEADHRVWSAQAMEKATEEKKR 833

Query: 431  -----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                                          +R++D      + T  LD  E   S+  C 
Sbjct: 834  EGDEKALAVLELPPAEFGRVRAPAGHWGSLIRVIDPLQNTTLQTLELDEDEAAFSLAVCY 893

Query: 462  FSD-DSNVYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
            F          VGT     ++P+  +    R+     E  +L+ + + +T     ++ AF
Sbjct: 894  FERMGGEPSLVVGTGVKTTLMPKGCKEGWLRVYAIRDEGKRLEFMHKTKTDDVPLAVAAF 953

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA + + ++LY+      G + L  +C ++G    +  +   G  I+VGDL +S  
Sbjct: 954  QGYLLAGVGKSLRLYEM-----GKKALLRKCENNGFPTGVATINVVGARIIVGDLQESTF 1008

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEG 628
              +Y+    +I  R     A D    +++AV  +D D    A+   N+F  R   + SE 
Sbjct: 1009 YCVYR----SIPSRQLLIFADDSQPRFLTAVCNVDYDTVCCADKFGNIFVNRLEERVSEK 1064

Query: 629  ATDEERGRL------EVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGV 680
              D+  G +       ++G  +  + +  +  GS+V  L    V  G    V++ T++G 
Sbjct: 1065 VDDDPTGAVILHEKGFLMGSANKTDLIAHYNVGSVVTSLTKVSVAPGGRDVVVYTTISGA 1124

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            +G +   + ++   F+  L+ ++R +   + G +H  +R +    K V     +DGDL E
Sbjct: 1125 VGALVPFISNDDVEFMTTLEMHIRSLNTSLVGRDHLAYRGYYAPVKAV-----VDGDLCE 1179

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            SF  L   +   I+  ++ +V E+ K++E+L
Sbjct: 1180 SFNMLPYPQQQAIAADLDRNVGEVLKKLEQL 1210


>gi|440907208|gb|ELR57379.1| Splicing factor 3B subunit 3 [Bos grunniens mutus]
          Length = 1133

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 185/788 (23%), Positives = 332/788 (42%), Gaps = 136/788 (17%)

Query: 95   TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
            T D FD +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    
Sbjct: 364  TTDEFDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDG 421

Query: 155  VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHA 212
            +R + +  R   NEWK+P   ++     N  QV++A  GG LVY E+   G L E  +  
Sbjct: 422  IRHIRADKR--VNEWKTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERK 479

Query: 213  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSV 271
            ++  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +  
Sbjct: 480  EMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPE 536

Query: 272  LLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
             LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P
Sbjct: 537  SLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRP 596

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            + L     +    V A S R  + YS   +   + ++ + +     F S   P+ +    
Sbjct: 597  VKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIS 656

Query: 376  EGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQS 422
               L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q 
Sbjct: 657  TNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQ 716

Query: 423  CAEE-------------SEM-------------------------HFVRLLDDQTFEFIS 444
             AEE             +EM                           +R+++      + 
Sbjct: 717  MAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLD 776

Query: 445  TYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQ 500
               L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+
Sbjct: 777  LVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLE 836

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-------H 553
             + +   +    ++  F G++L  + + +++Y     D G ++L  +C +          
Sbjct: 837  FLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKCENKAFLADGSSS 891

Query: 554  ILALYV------------QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            +  +YV            QT G  ++V D+ +S   + YK  E  +   A D    W++ 
Sbjct: 892  VFPMYVAVRHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTT 951

Query: 602  VEILDDDIYLGAENNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEY 643
              +LD D   GA+   N+  VR   N+    DE         +RG L       EV+  Y
Sbjct: 952  ASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNY 1011

Query: 644  HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNL 702
            H+GE V   +  +L+        G   ++++ T++G IG++     HE + F + ++ +L
Sbjct: 1012 HVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHL 1064

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
            R     + G +H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E
Sbjct: 1065 RSEHPPLCGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPE 1119

Query: 763  LCKRVEEL 770
            + K++E++
Sbjct: 1120 VSKKLEDI 1127


>gi|326469377|gb|EGD93386.1| splicing factor 3B subunit 3 [Trichophyton tonsurans CBS 112818]
          Length = 1188

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 207/834 (24%), Positives = 350/834 (41%), Gaps = 121/834 (14%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   + ++  +   Q+ T  G      
Sbjct: 402  YFRPRPAENLNL-----------VESIASLNPLMAASITNITEEDAPQIYTLCG------ 444

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
                  G  I+E    EL  +   +W+ + S +D FD ++V+  I ET          +E
Sbjct: 445  -----TGARISEIVESELPSVPSAVWTTKLSRNDQFDAYIVL--IGET----------VE 487

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 488  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 545

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
              QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 546  ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 604

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
             D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 605  DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 664

Query: 295  LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVN 352
            +L+  TGEL+D +   LG +P+ L + S K    V A S R  + YS    K    + +N
Sbjct: 665  VLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSRSWLGYSDVQTKSFTLTPLN 724

Query: 353  LKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSR 411
               +     F+S    + +   +   L I +I+ +   L    IPL   PR      +  
Sbjct: 725  YVGLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYP 784

Query: 412  TFAICSLKNQ--SCAEESEM--------------------------HF---VRLLDD-QT 439
             F +    N   S A ++++                          H+   ++++D   T
Sbjct: 785  LFYVIGSDNNILSPATKAKLLSESTAVNGDSAELPPEDFGYPRGTNHWASSIQVVDPIHT 844

Query: 440  FEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVED 496
               +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   E+
Sbjct: 845  KSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQEE 904

Query: 497  GK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHI 554
            GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C       
Sbjct: 905  GKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQITPR 959

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G +
Sbjct: 960  VIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAGGD 1019

Query: 615  NNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
               N++ +R   K SE A ++  G   +    +L    NR    SLV+     D   IPT
Sbjct: 1020 KFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQD---IPT 1073

Query: 672  VIFGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
             I  T              + G +G+ +  +  +   F + L+  L      + G +H  
Sbjct: 1074 SIQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLI 1133

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++ ++
Sbjct: 1134 YRGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKISDM 1182


>gi|452820919|gb|EME27955.1| splicing factor 3B subunit 3 [Galdieria sulphuraria]
          Length = 1294

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 206/874 (23%), Positives = 361/874 (41%), Gaps = 156/874 (17%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
            +L P+  + + D   +G  Q+V  SG    GS + +R G    E A  EL G   G++++
Sbjct: 404  SLAPLTCWQIGDFYGEGSPQIVVGSGRRHRGSWKTLRLGYRWTEMAVSELPGYPVGVFTV 463

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R    D +D++++VSF++ + +L++   + +EE    GF +   T+F      N +VQV 
Sbjct: 464  REQQQDSYDSYIIVSFVNASLVLSVG--ETVEEVSDSGFSTFVSTIFVQLFSNNSIVQVH 521

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTEVK 210
            +  +R +    + + +EWK P G  + VA  NASQ+++      L+Y E+ + G+LTE++
Sbjct: 522  AQGIRHIRPDLQTV-HEWKPPKGLFIQVADGNASQLVIILNSKQLLYFELDETGMLTEIQ 580

Query: 211  HAQL----EYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
              +L     YE S    C+ I P+    S +   AV        R++SL   + +    L
Sbjct: 581  EVELIQDQSYESSSFLPCVSIAPLVAGQSKASFVAVSDGISYYTRLYSLKKESCLKPISL 640

Query: 263  GG-EIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
               + +  SVLL      +       LL     G  +  L++  TG L++++   +GTQP
Sbjct: 641  QALDTVANSVLLIGLSAPASSRSELVLLIGSHSGIYIRALVDPITGALSEQQSRLVGTQP 700

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYS-NVNLKEV-SHMCPFNSAAFPDSLAI 373
            + L+    +        S R  ++Y  N  LL +  +    V  H+  F S   PD +  
Sbjct: 701  VRLQRIEIQGKPVALVVSSRSYLVYLDNHLLLQTLPIGYDWVFDHVVGFCSEQCPDGVIA 760

Query: 374  AKEGELTIGTIDDIQKL-------HIRSIPLGEHPRRI---------------------- 404
                 L I + ++ + L       H  + P    PRR+                      
Sbjct: 761  CCGSSLCILSFEEDRDLFQTTHLFHSDTQPSLYTPRRLVDREDILSSSITNYTRNRILTL 820

Query: 405  -CHQE---------------QSRTFAICSLKNQSCAEESEMHFVRLLDDQ------TFEF 442
             C Q+               +   + +  + + SCA + +M F   +D+Q        E 
Sbjct: 821  ECDQQIVISPQDIVSHSSSLRQTGYPLGPIGSWSCAIQ-QMTF---MDNQFPNHEDPVES 876

Query: 443  IST--------YPLDTFEYGCSILSCSFS-DDSNVYYCVGTA--YVL----PEENEPTKG 487
             S         Y  +T EY  SI    FS D S++Y CVG    Y L    P E  PTK 
Sbjct: 877  TSCRWQQKCEIYNSETKEYISSICCIRFSHDSSSLYLCVGVVMDYALQVTNPLEKNPTKD 936

Query: 488  RI------LVFI---------------------VEDGKLQLIAEKETKGA---------- 510
             I      +VF                      ++D     +      GA          
Sbjct: 937  NIDIQRESIVFPRSEIRVYRWNETQWEYIHTTPIQDASSHRMEWNYDYGASHLSFHAASR 996

Query: 511  -----VYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH---GHILALYVQTR 562
                 + ++ +F G LL A+   +++Y     D G ++L  +  H     H +   ++T 
Sbjct: 997  YRNEIITTMASFQGHLLVAVGTSLRMY-----DLGKKQLLKKTQHPRATPHKITC-IETC 1050

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
             D I + D+ +S+ L  Y   +      A DY   W + + +LD D     +   N+  +
Sbjct: 1051 YDRIFLSDVQESVFLYRYSAADNLFLCIADDYLPKWCTTMCLLDYDTVAIGDKMGNISIL 1110

Query: 623  RKNSEGAT----DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD--VGQIPTVIFGT 676
            R   E  T    D   G L     +H  +    +  GS++  L   +   G +P + +GT
Sbjct: 1111 RLPPEAGTFIEQDPTGGLLSKEAPHHF-QLEACYYVGSVIQCLSKVEWTTGDVPLLFYGT 1169

Query: 677  VNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            ++G IGV+  L     +   + L+  LR+    + G +H  +RS+         ++ +DG
Sbjct: 1170 LDGAIGVMIPLRSTLDMELFQALELQLREYRSPLCGRHHLAYRSY-----FFPVRHVIDG 1224

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
            DL E F  LS  + ++I K ++ S+ ++ +++E+
Sbjct: 1225 DLCEEFYRLSLEQQEKIVKELDRSIVDVHRKLED 1258


>gi|260819270|ref|XP_002604960.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
 gi|229290289|gb|EEN60970.1| hypothetical protein BRAFLDRAFT_126697 [Branchiostoma floridae]
          Length = 1049

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 166/657 (25%), Positives = 287/657 (43%), Gaps = 100/657 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
            +L PI+   + DL  +   Q+   +G     S R++R+G+ ++E A  EL G    +W++
Sbjct: 403  SLSPIMSCQIADLANEDTPQLYVANGRGPRSSFRVLRHGLEVSEMAVSELPGNPNAVWTV 462

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + + DD FD ++VVSF++ T +L++   + +EE    GF   T TL C     + L+Q+ 
Sbjct: 463  KKNVDDEFDAYIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLSCSLIGEDALLQIY 520

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD-GILTE-V 209
               +R + S  R   NEW++P   ++     N  QV++A  GG LVY E+   G L E  
Sbjct: 521  PEGIRHIRSDKR--VNEWRTPGKKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYT 578

Query: 210  KHAQLEYEISCLDIN--PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLI---------- 257
            +  ++  E+ C+ +   P+GE     +  AVG+ TD +VRI SL   + +          
Sbjct: 579  ERKEMSAEVICMALANVPVGEQ--RCRFLAVGL-TDDTVRIISLDPADCLQPLSMQALPA 635

Query: 258  TKEHL------GGEII----PRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRK 307
            T E L      GGE I    PR+ +L       +L   L +G LL  +L+  TG+L+D +
Sbjct: 636  TPESLCILQMGGGEGIDDTGPRNTML-------FLNIGLQNGVLLRTVLDQITGDLSDTR 688

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
               LG++P+ L     +    V A S R  + Y+   +   + ++ + + +   F S   
Sbjct: 689  TRYLGSRPVKLFQVKMQGNEAVLAMSSRSWLSYTYQNRFHLTPLSYETLEYASGFASEQC 748

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSR------------TFA 414
            P+ +       L I  ++ +  +  + S PL   PR+     QS             T A
Sbjct: 749  PEGIVAISANTLRILALEKLGAVFNQISTPLMYTPRKFVIDTQSNNIIMIETDHNSYTEA 808

Query: 415  ICSLKNQSCAEE-------------SEM-------------------------HFVRLLD 436
              + + Q  AEE             +EM                           +R+L+
Sbjct: 809  TKAQRKQQMAEEMVEAAGEEEKELAAEMAAAFINENLPEATFGSPKAGPGMWASVIRVLN 868

Query: 437  DQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL--VFI 493
                  +    L+  E   SI  C F++   + +  VGTA  +        G  L    +
Sbjct: 869  PIQGNTLDLIQLEQNEAAFSIAICKFANRGEDTFVVVGTAKDMTMNPRTCSGGFLHTYQL 928

Query: 494  VEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHH 551
            V +G KL+LI +   +    ++++F G++L  I + +++Y     D G ++L  +C   H
Sbjct: 929  VNNGEKLELIHKTPVEDVPGAISSFQGRILVGIGRLLRIY-----DLGKKKLLRKCENKH 983

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
                 + + T G  I V D+ +S   + YK +E  +   + D N  W++    LD D
Sbjct: 984  VPNFIMSIHTMGHRIFVSDVQESFHFIRYKRQENQLIIFSDDTNYRWITCSTQLDYD 1040


>gi|320587625|gb|EFX00100.1| nuclear mRNA splicing factor protein [Grosmannia clavigera kw1407]
          Length = 1220

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 201/840 (23%), Positives = 359/840 (42%), Gaps = 104/840 (12%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRI 67
            P + +    +P    + VE +E   ++ P++D  V +L      Q+ +  G     + R+
Sbjct: 401  PYEPVYFYPRPAENLALVESIE---SMNPMLDCKVANLTDDDVPQIYSVCGNGARSTFRM 457

Query: 68   VRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
            +++ + +NE  + +L G    +W+ +   D+ +D F+V+SF + T +L++   + +EE  
Sbjct: 458  LKHALEVNEIVASQLPGTPTAVWTTKVRRDEEYDAFIVLSFNNGTLVLSIG--ETVEEVT 515

Query: 127  IEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR-NEWKSPPGYSVNVATANAS 185
              GF S   TL       + L+QV    +R +    R+ R NEW +P   S+  A  N  
Sbjct: 516  DTGFLSSVPTLAVQQLGDDGLIQVHPKGIRHI----RDGRVNEWAAPQHRSIVAAATNER 571

Query: 186  QVLLATGGGHLVYLEIG-DGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTD 243
            QV++A   G +VY E+  DG L E    +  +  ++CL +  + E    S   AVG   D
Sbjct: 572  QVVVALSSGEIVYFEMDTDGSLAEYDEKKEMFGTVTCLSLGAVPEGRLRSSYLAVGC-DD 630

Query: 244  ISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLL 296
             +VRI SL P+  L           P S+L+ A +  S      YL   L  G  L  +L
Sbjct: 631  CTVRILSLDPETTLDNMSIQALTAAPSSLLIMAMDDSSAGGTALYLHIGLHSGVYLRTVL 690

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY--SSNKKLLYSNVNLK 354
            +  TGELTD ++  LG + + L   S +    V A S RP + Y  S  K    + ++  
Sbjct: 691  DEVTGELTDTRQRFLGPKLVRLFQVSVQRRVCVLALSSRPWLGYDDSKAKNFAMTRLDYS 750

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI-RSIPLGEHPRRICHQEQSRTF 413
            E+     F+S    + +       L I +I+ +    I +S PL   PRR+    +   F
Sbjct: 751  ELEWGWNFSSEQCEEGMVGIHGNFLRIFSIEKLGDALIQKSFPLTYTPRRLVKHPEFGIF 810

Query: 414  AICSLKNQSCAEESEMHFVR----------LLDDQTFEF--------------------- 442
                  N + + +     +           +L  + F +                     
Sbjct: 811  YTIEADNNTLSPDLRRQLIEAPGVTNGDASVLPPEDFGYPRGNGRWASCISVVDPVGEDP 870

Query: 443  --ISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDG 497
                T  L+  E    +   SF S     Y  VGT   ++    + ++G I  +  V+DG
Sbjct: 871  GVTQTIELEGNEAAVCMAVASFVSRGGESYLIVGTGRNMILSPRQFSEGYIHAYRFVKDG 930

Query: 498  -KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHG 552
             +L+L+ + + +    +L AF G++L  I   +++Y    K ML     R+ QSE     
Sbjct: 931  TQLELVHKTKVEEPPTALLAFQGRILVGIGNVLRIYDLGIKQML-----RKAQSEVSSK- 984

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              L + +QT+G  +VVGD+ + ++ ++YK E   +     D    W +   ++D     G
Sbjct: 985  --LIVSLQTQGSRVVVGDVEEGVTYVVYKPEINKLLPFVDDTIKRWTTCTTMVDYQSVAG 1042

Query: 613  AENNFNLFTVRKNSEGATDEE-----------RG-------RLEVVGEYHLGEFVNRFRH 654
             +   NL+ +R + + + D +           RG       RL ++   +  +       
Sbjct: 1043 GDKFGNLWILRVSDKASQDADEPGSELQLVHARGYLHGAPNRLALMAHVYTQDVPMSICK 1102

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLN 713
             SLV       VG    +++  + G +G +   +  +   F + L+T++R+    + G +
Sbjct: 1103 ASLV-------VGGQEVLVWSGLQGTVGALVPFVSRDDADFFQNLETHMRQEDAPLAGRD 1155

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            H  +RS+      V  K  +DGDL E F  L R +   I+  ++ SV E+ +++    R+
Sbjct: 1156 HLMYRSY-----YVPVKGVIDGDLCERFNLLPREKKQMIAGELDRSVREIERKISVSARV 1210


>gi|358060450|dbj|GAA93855.1| hypothetical protein E5Q_00501 [Mixia osmundae IAM 14324]
          Length = 1153

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 188/811 (23%), Positives = 350/811 (43%), Gaps = 98/811 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK--GMWS 90
            +L PIVD  V ++      Q++T  G     SL+++R+G+ + E  S  L G +  G+W+
Sbjct: 361  SLCPIVDAKVANVLGADAPQIITACGRGHRSSLKMLRHGLEVEEMVSSGL-GFEPTGLWT 419

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             +  +DD +D+++V+S  + T +L +   + +E+    G     +TL       + +VQV
Sbjct: 420  TKLKSDDTYDSYIVLSAPAATIVLTIG--ESIEQASNSGLVENQRTLCVQQVGDDSIVQV 477

Query: 151  -TSGSVRLVSSTSRELRNEWK-SPPGYSVNVATANASQVLLATGGGHLVYL--EIGDGIL 206
              +G +R+ +  S+E+   W  +P   ++ VA AN  Q++LAT  G ++YL  E+   I 
Sbjct: 478  HPAGFLRVRADGSKEV---WPLAPERVNLAVACANQRQIVLATTSGDIIYLRCELDGEIT 534

Query: 207  TEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-E 265
                  QL   ++ + I  + E+   +    VG   D +VRI SL + N +    +    
Sbjct: 535  VFDDRKQLGVSVTSMSIGELSEDRLQTDYLCVGC-EDQTVRIISLQEQNCLETISIQALT 593

Query: 266  IIPRSVLLCAF--------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
             +P S+ +              +++   L +G LL  +L+  +G LTD +   LGT+P+ 
Sbjct: 594  ALPSSICIAEILDSSVDKTRPTTFVNIGLQNGVLLRTVLDPMSGRLTDTRTRFLGTRPVK 653

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
            LR  +  +++ V + S R  V Y+    L +  +    + H     +   P+ +      
Sbjct: 654  LRRLAIGDSSGVLSISSRTWVNYTHQGLLQFDPLISDPLDHATGLRAEVCPEGIIGVTGD 713

Query: 378  ELTIGTIDDI-QKLHIRSIPLGEHPRRICH----------QEQSRTFAICSL--KNQSCA 424
             L I T+  I  K+ + SIPL   PRR             Q   RT +  +   K +   
Sbjct: 714  TLRIFTLPKIGTKVKMDSIPLSLTPRRTAFHPAGTLLYMIQSDHRTLSPITQEEKAKDLM 773

Query: 425  EESEMHF------------------VRLLDDQTFE--FISTYPLDTFEYGCSILSCSFSD 464
            E SE  +                  + ++D    E   ++   LD  E   S+    F++
Sbjct: 774  EPSEAMWTAEINGLMRAEAGQWSSCISIIDPTEPENATVTQIYLDNNEAAFSVAVAQFAE 833

Query: 465  DSNVYY-CVGTAY---VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFN 518
                ++  VGTA    V P     T G I  + I E G+ L+L+ + E      S+ AF 
Sbjct: 834  RPGKWFLLVGTAQDTTVSPRTC--THGFIRTYEITEAGRSLELLHKTELDDVPLSIAAFQ 891

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            G+ +  + + ++LY        +R L+           + +Q +G  I   D   S+  +
Sbjct: 892  GRAVVGVGRALRLYTM----GKSRLLRKSENKSFPAAVVSLQVQGSRIYASDAQDSVYFV 947

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGATDEERG 635
             YK  +  +   A D    W++   ++D D     +   N+F  R +   SE   +++ G
Sbjct: 948  AYKAADNRLLIFADDTQQRWITCNTVVDYDTVASGDKFGNVFVSRVDKLVSEDVDEDQTG 1007

Query: 636  ---------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
                           RL+++  +++G+ +   +  SLV        G    +++  + G 
Sbjct: 1008 AGILHEKPLFMGAPHRLQLLTHFNVGDILTCIQKVSLV-------AGGREILLYTCLGGT 1060

Query: 681  IGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            +G+ I  +  E   F   L+ ++R     + G +H  +R +      V  K  +DGDL E
Sbjct: 1061 VGMLIPFISKEDVEFSSTLEMHMRAENPSIVGRDHLAYRGYY-----VPQKATVDGDLCE 1115

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +F  L   +  +I+  ++ SV E+ K+++ +
Sbjct: 1116 TFALLPMQKQAQIAGELDRSVSEVLKKIDSM 1146


>gi|167522323|ref|XP_001745499.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775848|gb|EDQ89470.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1172

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 196/860 (22%), Positives = 353/860 (41%), Gaps = 134/860 (15%)

Query: 4    FYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 63
             Y  P+ L  LNL P      ++V+E   +L P++D  + D  +Q   Q+    G     
Sbjct: 348  LYFRPRPL--LNLAP------LDVIE---SLAPVMDCQLADAGQQDGPQLYALCGRGSGS 396

Query: 64   SLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            SLR++R+G+ ++  A   L G    +WS++   +D  DT++V+SF+  T +L +   + +
Sbjct: 397  SLRVLRHGLEVSAMAESPLPGNPSAVWSVKRHVEDEADTYIVMSFVDATLVLGIG--ETV 454

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            EE    GF     TL       + L+Q+ +  +R +    R   NEWK+P    ++    
Sbjct: 455  EEVTDSGFLGSVATLSASRIGDDALLQIHAMGIRHILHDGR--INEWKAPDRTKISHCAV 512

Query: 183  NASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGM 240
            N  Q ++A   G LVY E+   G L E  +  ++  +++ L + PI E    ++  A+G+
Sbjct: 513  NERQAVVALSNGELVYFELDRSGQLIEHSERVEMSSQVTALALAPIPEGAQTARFLALGL 572

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIPRSVL-LCAFE---------GISYLLCALGDGH 290
              D +VR+ SL   + +    L  + +P +   LC  E         G+S L   LG+G 
Sbjct: 573  -DDQTVRLMSLDKSDCLAP--LSMQALPGAAASLCMVEVRGTHGEPSGLS-LAIGLGNGV 628

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
            L+   ++  T +L+D +   LG + + L          V A S +P + Y        + 
Sbjct: 629  LMRSRVDTLTADLSDTRTRYLGARAVKLFPVKVAEEPAVLALSTKPWLSYRYQGHSRITP 688

Query: 351  VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQ 409
            ++   + +   F+S   P+ +A      L I   + + Q  H  SIPL    RR+    +
Sbjct: 689  LSYDALEYASAFSSDQCPEGVAAVAGNTLRIFAFEKLGQVFHQNSIPLEYTGRRLLLDPE 748

Query: 410  SRTFAICSLKNQSC----------------------AEESEMH--------FVRLLDDQT 439
            + + A  +  +Q C                      AE+++              LD + 
Sbjct: 749  A-SLAFIAEGDQGCLSVTAKAERLSRIASHQAGTAMAEQTDPQEDLTSPAALAEPLDVKQ 807

Query: 440  F----------------------EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYV 477
            F                      E     PL   E   S+    F+   N  + V     
Sbjct: 808  FGQSYAGDNLWASNIRVVNLAQGETTCLVPLAQDEMVMSLARVRFASSPNDKHIVAGVVK 867

Query: 478  --LPEENEPTKGRILVFIVEDGKLQLIAEKETKGAV-YSLNAFNGKLLAAINQKIQLYKW 534
               P++       +L F V+  ++ L+      G +  +L  F GK+LA +   ++++  
Sbjct: 868  GWKPKQQSMDGAFLLTFQVQGDQVVLLHRTAVDGGLPCALAEFAGKVLAGVGNTLRIFDL 927

Query: 535  MLRDDG----TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
              +        R+L S+  H        + T G  I   D   S   L YK  E A+   
Sbjct: 928  GKKKLLLKTENRQLPSQVVH--------ITTMGTRICAADQKHSFVWLKYKPAENALTIF 979

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERG--- 635
            A D N  W +   +LD     GA + F  F V +     TD+             RG   
Sbjct: 980  ADDTNPRWCTRGVLLDYQTVAGA-DKFGNFVVARLGTDLTDQIDDDPTGSKAFWSRGILN 1038

Query: 636  ----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-E 690
                +++++  YH+GE +   +  +LV        G    +++ T++G IG+     + +
Sbjct: 1039 GASQKMDILCNYHVGETILSLQKVTLV-------PGGAECILYTTMSGGIGLFLPFSNRD 1091

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
             + F   L+ +LR+    + G +H  +RS     K+V     +DGDL E +  LS +  +
Sbjct: 1092 DFEFFTSLELHLRQEHAPLCGRDHLHYRSAYFPVKSV-----IDGDLCEQYPLLSASVKN 1146

Query: 751  EISKTMNVSVEELCKRVEEL 770
            E+++ +     ++ K++E++
Sbjct: 1147 EVAEGLERPTTDVIKKIEDI 1166


>gi|320164105|gb|EFW41004.1| splicing factor 3B subunit 3 [Capsaspora owczarzaki ATCC 30864]
          Length = 1218

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 198/843 (23%), Positives = 351/843 (41%), Gaps = 112/843 (13%)

Query: 4    FYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 63
            F   P+ L+ L L        ++V+E   +  P +   V DL  +   Q     G   + 
Sbjct: 406  FVYTPRPLLNLVL--------LDVME---STAPTMQCRVEDLLGEDAPQFYLLCGRGPNS 454

Query: 64   SLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            +LRI+R+G+ +++ A+ EL      +WS++ S  D  DT+ +VS+ S T +L++   D++
Sbjct: 455  TLRILRHGLEVSQLAATELTASPVAIWSVKRSIHDIHDTYFIVSWASATVVLSVG--DQV 512

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
                  G      T+       + L+QV +  +R + + SR   NEW++P    +  A  
Sbjct: 513  APVSDSGLLLTVGTIAVSRIGEDDLLQVYTDGIRHIRADSRV--NEWRTPGRRQIVRAAI 570

Query: 183  NASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGM 240
            N  QV++A  GG LVY E+   G L E  +      E+  L I P+  +   ++  AV  
Sbjct: 571  NDRQVVIALAGGELVYFELDITGQLNEFAERFTSSAEVCALAIAPVPADRRRARFLAVAA 630

Query: 241  WTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFEGISY--------LLCALGDGHL 291
              D +VRI SL   +  T + LG + +  R+  LC F   S         L   L +G L
Sbjct: 631  -EDNTVRIVSLELSD--TLQSLGVQTVADRASSLC-FADPSLDNSSADLVLGVGLQNGIL 686

Query: 292  LNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNV 351
            L   +   +G LTD +   LGT+P+ L            A S RP + Y        + +
Sbjct: 687  LRTSVEPSSGNLTDTRTRYLGTRPVMLFPSKVHGAAGFLALSSRPWIFYVQQGTPTLTPL 746

Query: 352  NLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHPRRIC----H 406
            +   +     F++A  P+ L       L +  +  +  + +  S+PL   PRR      H
Sbjct: 747  SYDALDCAATFSAANCPNGLVAIAGNTLRVLNLPRLGSVFNQTSMPLKYTPRRFIVDSEH 806

Query: 407  Q-------------------EQSRTFAICSLKNQSCAEE-SEMHF-------------VR 433
            +                   EQ+R  A  +    + AE   +  F             +R
Sbjct: 807  RLLVIAESDHNTFAAGRKAVEQARVAAETNTTQAAIAESLPDAVFGAPAAGAARWGSCLR 866

Query: 434  LLDDQTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAYVLPEENEPTKGRILV- 491
            ++D Q  E +    LD  E   S+ SCSF   +   ++ VGT   L  +    +G  L  
Sbjct: 867  IVDAQLRETLELIELDEDEGVFSMTSCSFHGHEGQTFFIVGTTKALNLQTRAHQGGCLYT 926

Query: 492  --FIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
              F  +  +L  +   E +    ++  F G+LL  +   +++Y     D G R+L  +C 
Sbjct: 927  YRFNPQTRRLDFVHRTEVEDVPGAMYPFQGRLLVGVGSLLRVY-----DLGKRKLLRKCE 981

Query: 550  HHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            +         + T G  IVV D+ +S   L Y+  +  +   A D N  W+++  ++D D
Sbjct: 982  NRSIPNFVSSITTSGGRIVVTDVQESFHFLRYRPSDNMLAVFADDSNPRWVTSSTMVDYD 1041

Query: 609  IYLGAENNFNLFTVR-------------------KNSEGATDEERGRLEVVGEYHLGEFV 649
                 +   N+F +R                    +S+   +    + + +  +H+G+ V
Sbjct: 1042 TVAAGDKFGNVFVLRLPQDLQDDLEDDPTGGRLLGSSKNTLNGAAQKADTIINFHVGDTV 1101

Query: 650  NRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKG 708
               +  +L+   P         +++ T  G IGV+     +  + F + L+ ++R+    
Sbjct: 1102 TTMQKTALI---PSGS----ECLVYTTTLGAIGVLIPFTTQSDIDFFKHLEMHMRQENPP 1154

Query: 709  VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM-NVSVEELCKRV 767
            + G +H  +RS         +KN +DGDL E F  L   +   I+  + + +  E+ K++
Sbjct: 1155 ICGRDHLAFRS-----HYFPSKNVIDGDLCEQFNSLDPHKKRLIAGDLADRTPSEVSKKL 1209

Query: 768  EEL 770
            E+L
Sbjct: 1210 EDL 1212


>gi|315053737|ref|XP_003176243.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
 gi|311338089|gb|EFQ97291.1| pre-mRNA-splicing factor rse1 [Arthroderma gypseum CBS 118893]
          Length = 1181

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 197/835 (23%), Positives = 348/835 (41%), Gaps = 130/835 (15%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+    LNL           +E   +L P++   V ++  +   Q+ T  G     S
Sbjct: 402  YFRPRPAENLNL-----------VESIASLNPLMAASVTNVTEEDAPQIYTLCGTGARSS 450

Query: 65   LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
             R +++G+ ++E    EL  +   +W+ + S +D +D ++V+SF + T +L++   + +E
Sbjct: 451  FRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQYDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
            E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 509  EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 566

Query: 184  ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPS----YSQIAA 237
              QV +A   G +VY E+  DG L E  +  Q+   ++CL    +GE P     +  +  
Sbjct: 567  ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLS---LGEVPKDDVDFCPVCP 623

Query: 238  VGMWTD-ISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLL 296
            +    D  ++R+    D+ L    H+G                      L  G  L  +L
Sbjct: 624  IHHVHDRFTLRV----DVIL----HIG----------------------LYSGIYLRTVL 653

Query: 297  NMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS--SNKKLLYSNVNLK 354
            +  TGEL+D +   LG +P+ L + S K    V A S R  + YS    K    + +N  
Sbjct: 654  DEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSRSWLGYSDLQTKSFTLTPLNYV 713

Query: 355  EVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF 413
             +     F+S    + +   +   L I +I+ +   L    IPL   PR      +   F
Sbjct: 714  GLEWSWNFSSEQCVEGMVGIQGQNLRIFSIEKLDNNLLQEPIPLAYTPRNFVRHPEYPLF 773

Query: 414  AICSLKNQSCAEESEMHF-------------------------------VRLLDD-QTFE 441
             +    N   +  ++                                  + ++D   T  
Sbjct: 774  YVIGSDNNVLSPSTKAKLLGESTAVNGDSAELPPEDFGYPRGTNHWASCIEVVDPINTKS 833

Query: 442  FISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK 498
             +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   E+GK
Sbjct: 834  VLSKLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTYTCGFIHIYRFQEEGK 893

Query: 499  -LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILA 556
             L+ I + + +    +L  F G+LLA +   +++Y     D G R+L  +C       + 
Sbjct: 894  ELEFIHKTKVEQPPLALLGFQGRLLAGVGPDLRIY-----DLGMRQLLRKCQAQITPRVI 948

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            + +QT+G  I+V D+ +S++ ++YK++E A+   A D  + W +   ++D +   G +  
Sbjct: 949  VGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIISRWTTCTTMVDYETVAGGDKF 1008

Query: 617  FNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVI 673
             N++ +R   K SE A ++  G   +    +L    NR    SLV+     D   IPT I
Sbjct: 1009 GNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVVHFYSQD---IPTSI 1062

Query: 674  FGT--------------VNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
              T              + G +G+ +  +  +   F + L+  L      + G +H  +R
Sbjct: 1063 QKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNAPLAGRDHLIYR 1122

Query: 719  SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++   T L
Sbjct: 1123 GY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKISVRTIL 1172


>gi|336469942|gb|EGO58104.1| pre-mRNA splicing factor RSE1 [Neurospora tetrasperma FGSC 2508]
          Length = 1192

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 199/808 (24%), Positives = 345/808 (42%), Gaps = 101/808 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D          I ET          +EE    GF +   TL       +
Sbjct: 476  SAVWTTKLTKYD---------HIGET----------VEEVSDSGFLTTAPTLAVQQMGED 516

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG
Sbjct: 517  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDG 573

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 574  SLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQ 632

Query: 263  GGEIIPRSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 633  ALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTK 692

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +    
Sbjct: 693  LFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIH 752

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEE 426
               L I +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+
Sbjct: 753  ANYLRIFSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQ 812

Query: 427  SEMHFVRLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF- 462
                   +L  + F +                IS  P       LD  E   S     F 
Sbjct: 813  QSNGDATVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFA 872

Query: 463  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            S +   +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G
Sbjct: 873  SQEGESFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQG 932

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            +LLA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++
Sbjct: 933  RLLAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVV 988

Query: 580  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
            YK E   +   A D    W +   ++D +   G +   N++ VR     + + +    E 
Sbjct: 989  YKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EP 1044

Query: 640  VGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV 683
              E HL    N + HG+              LP S       VG    +++  + G +GV
Sbjct: 1045 GSEIHLMHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGV 1103

Query: 684  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
             I  +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F 
Sbjct: 1104 FIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFS 1158

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEEL 770
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1159 LLPNDKKQMIAGELDRSVREIERKISDI 1186


>gi|164429062|ref|XP_957282.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
 gi|157072394|gb|EAA28046.2| pre-mRNA splicing factor RSE1 [Neurospora crassa OR74A]
          Length = 1192

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 199/808 (24%), Positives = 345/808 (42%), Gaps = 101/808 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
            ++E   ++ P VD  V +L  +   Q+ +  G     + R++++G+ ++E  + EL G  
Sbjct: 416  LVESIDSMNPQVDCKVANLTGEDAPQIYSVCGNGARSTFRMLKHGLEVSEIVASELPGTP 475

Query: 87   -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +  D          I ET          +EE    GF +   TL       +
Sbjct: 476  SAVWTTKLTKYD---------HIGET----------VEEVSDSGFLTTAPTLAVQQMGED 516

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             L+QV    +R +        NEW +P   S+  ATAN +QV++A   G +VY E+  DG
Sbjct: 517  GLIQVHPKGIRHIVQGRV---NEWPAPQHRSIVAATANENQVVIALSSGEIVYFEMDSDG 573

Query: 205  ILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E  +  ++   ++ L +  + E    S   AVG   D +VRI SL PD  L  K   
Sbjct: 574  SLAEYDEKKEMSGTVTSLSVGQVPEGLKRSSFLAVGC-DDCTVRILSLDPDSTLEMKSIQ 632

Query: 263  GGEIIPRSVLLCAFE-----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
                 P ++ + + E        YL   L  G  L  +L+  TGELTD ++  LG +P  
Sbjct: 633  ALTAAPSALSIMSMEDSFGGSTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTR 692

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            L   S ++   V A S RP + Y+    K  + + ++  E+ +   F+S    + +    
Sbjct: 693  LFQVSVQDQPCVLALSSRPWLGYTDPLTKGFMMTPLSYTELEYGWNFSSEQCLEGMVGIH 752

Query: 376  EGELTIGTIDDIQKLHI-RSIPLGEHPRRIC-HQEQSRTFAICSLKN-------QSCAEE 426
               L I +I+ +    I +SIPL   P+ +  H EQ   + I S  N           E+
Sbjct: 753  ANYLRIFSIEKLGDNMIQKSIPLTYTPKHLVKHPEQPYFYTIESDNNTLPPELRAKLLEQ 812

Query: 427  SEMHFVRLLDDQTFEF----------------ISTYP-------LDTFEYGCSILSCSF- 462
                   +L  + F +                IS  P       LD  E   S     F 
Sbjct: 813  QSNGDATVLPPEDFGYPRAKGRWASCISIIDPISEEPRVLQRIDLDNNEAAVSAAIVPFA 872

Query: 463  SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNG 519
            S +   +  VGT   ++ +  + T+G I V+   EDG+ L+ I +   +    +L  F G
Sbjct: 873  SQEGESFLVVGTGKDMVLDPRQFTEGYIHVYRFHEDGRDLEFIHKTRVEEPPLALIPFQG 932

Query: 520  KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            +LLA + + +++Y   L+    R+ Q++       L + +Q++G+ I+VGDL + I+ ++
Sbjct: 933  RLLAGVGKTLRIYDLGLK-QLLRKAQADV---TPTLIVSLQSQGNRIIVGDLQQGITYVV 988

Query: 580  YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
            YK E   +   A D    W +   ++D +   G +   N++ VR     + + +    E 
Sbjct: 989  YKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNIYIVRCPERVSQETD----EP 1044

Query: 640  VGEYHLGEFVNRFRHGS----------LVMRLPDS------DVGQIPTVIFGTVNGVIGV 683
              E HL    N + HG+              LP S       VG    +++  + G +GV
Sbjct: 1045 GSEIHLMHARN-YLHGTPNRLSLQVHFYTQDLPTSICKTSLVVGGQDVLLWSGLQGTVGV 1103

Query: 684  -IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL 742
             I  +  E   F + L+ ++R     + G +H  +R +    K V     +DGDL E F 
Sbjct: 1104 FIPFVSREDVDFFQNLENHMRAEDPPLAGRDHLIYRGYYTPVKGV-----IDGDLCERFS 1158

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEEL 770
             L   +   I+  ++ SV E+ +++ ++
Sbjct: 1159 LLPNDKKQMIAGELDRSVREIERKISDI 1186


>gi|342888540|gb|EGU87812.1| hypothetical protein FOXB_01669 [Fusarium oxysporum Fo5176]
          Length = 1408

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 165/664 (24%), Positives = 292/664 (43%), Gaps = 68/664 (10%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
            +LE   +L P++D  V D   +G  Q+ + SG        ++++G+ IN+ AS +L G +
Sbjct: 754  LLESIDSLSPLLDCEVADPTGEGPPQIYSESGNGARSHFWMLKHGLEINKVASSDLPGTV 813

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
             G+W+ R +  D FD++++++  S    + M++ DE+E+    GF +   TL       +
Sbjct: 814  SGVWTTRMTRHDKFDSYIILT--SSDGTVVMSVGDEVEQVSDSGFLTTVTTLAIQQIGDD 871

Query: 146  QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDG 204
             +VQ+ S  +R + +      NEW +P   S+   T N  Q+ +A   G +VY E+  DG
Sbjct: 872  GIVQIHSKGIRHLRAGQI---NEWPAPQHRSIVAVTTNKRQIAIALSSGEIVYFEVDSDG 928

Query: 205  ILTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
             L E    + +   ++CL + P+ E    S +  VG   D +VRI  L PD  L +    
Sbjct: 929  SLAEYDETKVISTTVTCLSLGPVPEGRLRSPLLVVGC-EDCTVRILGLNPDSMLESNSIK 987

Query: 263  GGEIIPRSVLLCAFEGI---SYLLC---ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
                +P ++++ A E     S  LC    L  G  L   +N  TGEL+D +   LG + I
Sbjct: 988  TLTAVPSALIIMAMEHPLTSSSGLCLHIGLSSGVYLRTGMNEITGELSDTQTRFLGLKAI 1047

Query: 317  TLRTFSSKNTTHVFAASDRPTVIYSSNKK-LLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
             L   + K  T V A   +P + Y   K+    + +  +E+     F+S    + +    
Sbjct: 1048 KLFQVTVKGQTCVLALGSKPWMGYIDPKRGFTMTPLECEELHWASSFSSEQCQEGIIAIH 1107

Query: 376  EGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRL 434
               L I +++++    +R SIPL   PR          F    + N + + E     + +
Sbjct: 1108 ANFLHIFSVENLHNNVVRKSIPLTYTPRHFVKHPAEPYFYTIEVDNNTLSPELRAQLLAV 1167

Query: 435  LDDQTFEFIST----YP-------------------------LDTFEYGCSILSCSF-SD 464
             D    + +      YP                         L+  E   SI    F S 
Sbjct: 1168 DDHGDDKVLPPELFGYPRGNGRWASCISIIDPIGEQVLQRIDLEGNEAAISIAVAPFTSQ 1227

Query: 465  DSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKL 521
            D  ++  VGT   ++    + + G I V+   ++G+ LQ I + + +    +L AF  +L
Sbjct: 1228 DGEIFLLVGTGKDMILNPRQSSGGYIHVYRFHQNGRELQFIHKTKVEEPPMALVAFRDRL 1287

Query: 522  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-----LALYVQTRGDFIVVGDLMKSIS 576
               + + + +Y     D G ++L  +     HI     L + + T+GD IVVGD+ + ++
Sbjct: 1288 AVGLGKDLCIY-----DLGLKQLLRKA----HIEAAPQLIVSLDTQGDRIVVGDVQQGMT 1338

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEE 633
            ++++ HEE  +     D  A W +   ++D +  +G +   N++ VR   K S    D  
Sbjct: 1339 MVMFNHEEQRLIPFVDDIIARWTTCTTMVDYESVVGGDKFGNIWIVRCPKKTSHHVGDYA 1398

Query: 634  RGRL 637
            R  L
Sbjct: 1399 RNYL 1402


>gi|300120114|emb|CBK19668.2| unnamed protein product [Blastocystis hominis]
          Length = 1240

 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 188/803 (23%), Positives = 337/803 (41%), Gaps = 90/803 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ-GIKGMWSL 91
            +L P+V     DL   G  Q+    G      L++++ G+ I+  +   L     G+W+L
Sbjct: 421  SLSPLVKIHAEDLRGDGTPQLFALCGRSSRSQLKVLQQGLAISLLSQNPLPYAPSGLWTL 480

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            R +       F+V+SF + T +LA+     +E+    GF     TL       N  +QV 
Sbjct: 481  RDARTGQ-HRFMVISFNNATIVLAVG--KSVEQVMDTGFKLDESTLATGVLEGNSFLQVY 537

Query: 152  SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 211
             G  R +          W+ P   S+  A  N  Q+++A   G ++Y E+ D  L  V+ 
Sbjct: 538  PGGFRQIFEDGHT--KVWEPPSRRSITAAAMNLRQIVVALSNGEVLYFEL-DERLEWVER 594

Query: 212  AQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIP 268
              + +  E+ CLD+  +  N   +   AVG + D S R++SL   +L+ +  +     +P
Sbjct: 595  ESMNHREEVICLDLPALAPNSLRAPFLAVG-YGDRSCRVYSLAPNSLLEELSMQALNAMP 653

Query: 269  RSVLLCAFEGIS------YLLCALG--DGHLLNFLLNMKTGELTDRKKVS-LGTQPITLR 319
             ++ L      S       LL  +G  +G L+   ++  +G+L++ +    LG +P+ L 
Sbjct: 654  SNLTLDTMRMGSGSLARETLLLTVGMENGILMRVEVDPVSGKLSNARSTRFLGPRPVRLF 713

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
               +     V A S +P + Y +N  L  +++    +    PF +    + +       L
Sbjct: 714  KILAGGNPCVLALSVKPWLCYCANNTLTLTSLVSDPLDLAAPFCNEDCSEGIVCVAGTNL 773

Query: 380  TIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQSRTF-------AICSLKNQSCAEESEMH 430
             I  IDD+ Q     SIPL   PR  + +  Q R         A   L+ QS  ++  + 
Sbjct: 774  NIIRIDDLTQPFTATSIPLSYTPRELVVYPGQPRLLLLETDHNAYSELEKQSFYQQHNVS 833

Query: 431  FV--------------------RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN-VY 469
            +V                    R++D  + + +    L   E   S+  C F+   +  +
Sbjct: 834  YVNEYDCGAPIPAEPDKWASCIRVVDAISLQTLERLELADNEAAFSMCVCRFASKGDEPF 893

Query: 470  YCVGTAYVLP-EENEPTKGRILVF-IVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
              +GTA  L       ++G I VF  VE   LQL+   E      +L  F+GKL A I +
Sbjct: 894  VVIGTAKNLKIHPRSCSQGFISVFRFVEGHSLQLLHRTEVDEVPAALCEFDGKLAAGIGR 953

Query: 528  KIQLYKWMLRDDGTRELQSECGHHG--HILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 585
             +++Y     D G ++L  +C +    H +   ++  G+ +  GDL  ++S + ++    
Sbjct: 954  SVRVY-----DLGKKKLLRKCENKAMPHFVT-KLRAMGERLYAGDLTDNVSFVKFRKGTN 1007

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE-----------------G 628
             + E A       ++A+++LD +  +  +   NLF  R + +                 G
Sbjct: 1008 QLVEFADGGIPRSITALDVLDYNTVVCGDKGGNLFVERVDPKVDDDIANPTGSRSLWNSG 1067

Query: 629  ATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP 688
                   + E     +LGE V   +   L+   P  D      V++GT+ G IG +  +P
Sbjct: 1068 LLSAAPNKAEQAASIYLGEIVTSVQKTVLI---PGGD----EVVLYGTIFGTIGALLPMP 1120

Query: 689  HEQYLF-LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRT 747
                L  L  ++  +RK    + G +   WRS          K  +DG+L E+F  L + 
Sbjct: 1121 SRDDLHHLMHIEMYIRKQEPSLVGRDILSWRS-----AYTPMKGIIDGNLCETFSMLPQI 1175

Query: 748  RMDEISKTMNVSVEELCKRVEEL 770
            + +EI+  + +SV  + K++E+L
Sbjct: 1176 KQEEIANALVLSVSSIVKKMEDL 1198


>gi|134106833|ref|XP_777958.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50260658|gb|EAL23311.1| hypothetical protein CNBA4270 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1218

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 204/816 (25%), Positives = 347/816 (42%), Gaps = 109/816 (13%)

Query: 33   NLGPIVDFCVVDL--ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI D  VV+L        Q+    G     + R +++G+ + E  S  L G+   +W
Sbjct: 428  SLDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVW 487

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ + D       V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 488  TLKLTED-------VLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGNAGLLQ 538

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW +PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 539  VHPYGLRHIRAADRV--DEWPAPPGQTIVAATTNRRQVVIALSTAELVYFELDPEGSLSE 596

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V I SL PD  L T        
Sbjct: 597  YQEKKALPGNATCVTIAEVPEGRRRTSFLAVGC-DNQTVSIISLEPDSTLDTLSLQALTA 655

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 656  PPTSICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKL 715

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               + +    V A S R  ++Y+    L    +    + +    ++A  PD L       
Sbjct: 716  VRANVQGQPSVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWSLSAAMCPDGLIGISGNT 775

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRR-ICHQEQS---------RTFAICSLKNQSCAEES 427
            L I  I  + +KL   S  L   PR+ I H   S         RT++  +++     +ES
Sbjct: 776  LRIFNIPKLGEKLKQDSTALTYTPRKFISHPFNSVFYMIEADHRTYSKSAIERIVKQKES 835

Query: 428  E-----------------------MHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
            E                        H+   VR+LD    E I T  LD  E   SI    
Sbjct: 836  EGRRVDTLLLDLPANEFGRPRAPAGHWASCVRVLDPLANETIMTLDLDEDEAAFSIAIAY 895

Query: 462  FS-DDSNVYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F       +  VGT      + +  K G + V+ I E G+ L+ + + +T      L  F
Sbjct: 896  FERGGGEPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRILEFLHKTKTDDIPLCLAGF 955

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LLA I + ++LY+      G + L  +C ++G   A+  +  +G  I+VGD+ +S  
Sbjct: 956  QGFLLAGIGKSLRLYEM-----GKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTF 1010

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 628
              +Y+    +I  R     A D    W++ V  +D +     +   N+F  R +   SE 
Sbjct: 1011 YCVYR----SIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGNIFINRLDPSISEK 1066

Query: 629  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-------IFG 675
              D+  G      +  ++G  H  E +  +  GS+V     + + +IP V       ++ 
Sbjct: 1067 VDDDPTGATILHEKSFLMGAAHKTEMIGHYNIGSVV-----TSITKIPLVAGGRDVLVYT 1121

Query: 676  TVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
            T++G +G +   +  +   F+  L+ ++R     + G +H  +R +      V  K  +D
Sbjct: 1122 TISGAVGALVPFVSSDDIEFMSTLEMHMRTQDISLVGRDHIAYRGY-----YVPIKGVVD 1176

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            GDL ESF  L   +   I+  ++ SV ++ K++E++
Sbjct: 1177 GDLCESFSLLPYPKQQAIALDLDRSVGDVLKKLEQM 1212


>gi|168031491|ref|XP_001768254.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680432|gb|EDQ66868.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1391

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 202/892 (22%), Positives = 347/892 (38%), Gaps = 184/892 (20%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
            N+ PI+DF + D   + Q Q+  CSGA  +GSLR++RNGI + +    S   QG+ G ++
Sbjct: 471  NVAPILDFSLADYHNEKQDQMFACSGAGNEGSLRVIRNGISVEKLYTTSPIYQGVTGTYT 530

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            +R    DP+  F V+SF+ ETR+L++ L + ++ TE  GF     TL C       +VQV
Sbjct: 531  MRMCCRDPYHAFFVMSFVQETRVLSVGL-NFVDITEAVGFQPCASTLACGTIEDYHVVQV 589

Query: 151  TSGSVRLVSSTSR----------ELRNEWKSPPGYSVNV-ATANASQVLLATGGGHLVYL 199
             S  V +   T               + WK P G  V++ A A+ + VL  +  G +V L
Sbjct: 590  CSKEVIVCVPTKTAHPAGIDSPLPFCSSWKPPQGLVVSLGAVASKAIVLALSKPGLIVML 649

Query: 200  EIGDGI-----LTEVKHAQLEYEISCLDI---------------------NPIGENPS-- 231
                G      L   +  +L+ E+SC+ I                      P   NPS  
Sbjct: 650  GSQRGANGALELCMTQQCELKAELSCISIPDEEDWTSSPLPPSIVGLVEGTPKSRNPSGV 709

Query: 232  -YSQIAAVGMWTDISVRIFSL---PDLNLITKEHLG---------GEIIPRSVLLCAFEG 278
               +I  VG   + SV + S+     L  +   H+             +P SV L  F+ 
Sbjct: 710  EVGRICVVGT-HEPSVEVLSIVPGEGLAPLAVGHISLVSCVGTTLSGCVPESVRLAQFDR 768

Query: 279  ISYLLCALGDGHLLNF---------------LLNMKTGE---------------LTDRKK 308
            + Y+L  L +G LL +               LL+    E               L D   
Sbjct: 769  L-YILAGLRNGMLLRYEWPASSTATLPDCTNLLSTSDWENIGITQPNLGGDKDVLEDSSP 827

Query: 309  V--------SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSH 358
            V         +G  P++L +  +  +  V A SDRP ++ ++  ++++ +++++    SH
Sbjct: 828  VLLHLVAVRRMGVSPVSLISLQASLSADVIALSDRPWLLQTARHSQRIAHTSISFPSSSH 887

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
              P NS   P+ +    +  L +  ++ +++L+++ +PLG  PRR+ +  +S+T  +  +
Sbjct: 888  AAPVNSVDCPNGILFVADCSLHLVEMEHLKRLNVQKLPLGRTPRRVLYHTESKTLIV--M 945

Query: 419  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-- 476
            +     +   +  V  +D  +    S Y LD  E   SI    +         VGT+   
Sbjct: 946  RTDYGPDGGLVSDVCCVDPLSGANYSCYTLDAGEVARSIQ--LWKRRQEQLLLVGTSLIG 1003

Query: 477  ----VLPEENEPTKGRILVFIV-------------------------------------- 494
                +   E E  KGR+LVF +                                      
Sbjct: 1004 GGGIMSSGEAESAKGRLLVFQLLSKHVGTHSQPVMSSTNTPTLSNQSTPGSSAADPMVLS 1063

Query: 495  ----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
                      E  +L+L       GAV S++++ G+ + A      L+    R D  + L
Sbjct: 1064 ESDESDLTDGEGWELRLKTHIILPGAVLSVSSYLGQYVLASAGNC-LFCLGFRPDSPQRL 1122

Query: 545  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
            +         +   +      I VGD    I    Y+   G +E          ++   +
Sbjct: 1123 RRMAMVKTRFMITSLSVHLSRIAVGDCRDGILFYTYQEVSGQLELLYCGGIQQLVADCVL 1182

Query: 605  LDDD--IYLGAENNFNLFTVRKNSEG--------ATDEERGRLEVVGEYHLGEFVNRFRH 654
            +D D  +      NF  F+     EG        +   ER  L +   YH+GE + R   
Sbjct: 1183 MDTDTAVVTDRRGNFCTFSSASTPEGDLNFFFAESVSPER-NLSLGCWYHIGETLMRIHK 1241

Query: 655  GSLVMRLP---------DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
             S     P          +D    PT   V+  ++ G + +   +  E+Y  L+ +Q+ L
Sbjct: 1242 ASFAYESPAEESMKNCGSNDAIAHPTHSSVVASSLLGSVFIFIKVTREEYDLLKAVQSRL 1301

Query: 703  R--KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
                +   + G NHE +R    +         LDGD++  FL+L+  + + +
Sbjct: 1302 AHYPITTPLLGNNHEDYR---GQGCPAGVCQVLDGDMLCQFLELTSAQQENV 1350


>gi|118400837|ref|XP_001032740.1| CPSF A subunit region family protein [Tetrahymena thermophila]
 gi|89287084|gb|EAR85077.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
          Length = 1197

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 213/856 (24%), Positives = 356/856 (41%), Gaps = 140/856 (16%)

Query: 7    LPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLR 66
            +P++L+ L           E ++   NL  I D  V DL  +G  Q+     A    +LR
Sbjct: 385  IPRKLVNL-----------EQVDSLDNLSAISDIKVNDLTGEGNPQIYALCAAGSRSTLR 433

Query: 67   IVRNGIGINEQASVELQ-GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 125
            I+R+G+ ++E A+  L     G+W+++   D+    ++V+S   +T +L+  ++D +   
Sbjct: 434  ILRHGLQVSEYATSRLPLRPNGIWTIKQRHDEGLTKYIVLSSSKKTYVLS--IKDTISAV 491

Query: 126  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANAS 185
                  + +QTL       N ++QVT  S R +      L   +K+     V  A +N+ 
Sbjct: 492  NDSSLDTNSQTLHAGILENNCIIQVTPESFRQIRDNRVTL---YKTESNKFVK-ACSNSR 547

Query: 186  QVLLA------TGGGHLVYLE--IGDGILTEVKHAQLEYEISCLDIN--PIGENPSYSQI 235
            Q+ LA        GG ++Y E  +G  +    + A+L  +I C+DI   PIG  P + + 
Sbjct: 548  QIALALQGGQGQPGGDIIYFEFDLGGQLKRIEEKAKLTSDIECIDIGEVPIGR-PKF-KF 605

Query: 236  AAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLC-----------AFEGISY 281
             AVG   D +VRI SL     L  ++ + L G  IP SV L            A E   Y
Sbjct: 606  LAVG-CKDQTVRILSLEQDQYLQRLSLQALPG--IPESVSLIEMKRGTGTEQEAEEYQLY 662

Query: 282  LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
            L   L +G LL   ++  TG L+D +   L   PI    +  +    + A S RP + Y+
Sbjct: 663  LFVGLQNGILLRATVDQVTGSLSDVRTRVLSAAPIRTCKYVVQGQPALLALSTRPWICYT 722

Query: 342  SNKKLLYSNVNLKEVSHMCP--FNSAAFPDSLAIAKEGELTIGTIDDIQK----LHIRSI 395
               K     ++   + +  P  FN         ++  GE     I + QK    L+ + I
Sbjct: 723  YLGKYQMVPISYDMLEYAAPAVFNMQGEQKQCIVSTSGESV--RIIEPQKYGDLLNQQVI 780

Query: 396  PLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF------------------------ 431
             L   PR++   E+S    +    N+   E  +                           
Sbjct: 781  KLRYSPRKMAIHERSHNIVLIESDNKVYNESQKKQLIEQYYSNQNKGDLATQVDLLTAPS 840

Query: 432  ------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 485
                  VR++D  T + ++ Y L+  E+  S+   +F +    Y CVGT  V   +  P 
Sbjct: 841  GNWASCVRIVDPVTRKTLNIYELENNEHALSMCMVNFDNKDETYVCVGT--VKDYQVHPN 898

Query: 486  KGRILVFI------VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW----M 535
            +   + +I       +   L+L+ + E      +L+A  GKLLA     ++ Y+     +
Sbjct: 899  RNFSVCYINTFQLNEKLNTLELLHKTEIFEIPGALHAHKGKLLAGCGTFLRYYELGKKKL 958

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L+    + LQS            +QT GD I V  +  S+ +L Y+ ++    E   D  
Sbjct: 959  LKKAEIKGLQSPVNG--------IQTFGDRIYVSMVADSVHVLKYRSKDQTFYEVCDDIL 1010

Query: 596  ANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG------------------RL 637
              WMS+ ++LD   Y+G +   N F  R  S    + E                    + 
Sbjct: 1011 PRWMSSFQVLDYHTYIGGDKFENAFVCRVPSNADEEMEENPMAYKLRWETGYLNGAPFKT 1070

Query: 638  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLF 694
            E +  ++ GE +   +  SLV     S   +I  V++GT  G IG  A LP    E   F
Sbjct: 1071 EQICHFYAGEVITTLQKASLV-----STGNEI--VLYGTSMGSIG--AYLPFQTKEDIDF 1121

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
               L+  LR  +  + G +H  +RSF    K+V     +DGDL E F+ LS  +   ++ 
Sbjct: 1122 FIHLEMYLRLDVLPLAGRDHVMFRSFYGPVKSV-----IDGDLCEQFIKLSSGKQKVLAD 1176

Query: 755  TMNVSVEELCKRVEEL 770
             M+    E+ K+++E+
Sbjct: 1177 EMDRHPHEVHKKLDEI 1192


>gi|281202530|gb|EFA76732.1| CPSF domain-containing protein [Polysphondylium pallidum PN500]
          Length = 933

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 135/579 (23%), Positives = 254/579 (43%), Gaps = 92/579 (15%)

Query: 42  VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFD 100
           V+DL  + Q Q+   +G     ++R++R G+ I + A   L GI  G+W++  S +D  D
Sbjct: 246 VMDLVNEEQPQIYALTGVADRSAMRVLRYGLPIAQIAGTPLPGIPSGLWTIPRSQEDSID 305

Query: 101 TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS 160
            ++VVSFI  T +L++   + +EE    G  + T ++       + ++QV    +R +  
Sbjct: 306 KYIVVSFIGSTLVLSVG--ETVEEVVDSGILATTTSILVRPIGADSIIQVFPHGIRHIKG 363

Query: 161 TSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQLEYEIS 219
             R   NEW++P   ++++AT+NA+QV++A GGG ++Y E+   G L+EV   +   EIS
Sbjct: 364 DRR--INEWRAPGRKTISLATSNATQVVIALGGGEVIYFELDAAGNLSEVAKKEFRREIS 421

Query: 220 CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK------EHLGGEIIPRSVLL 273
            L+I P+ +    ++  A+G W +  VR+ SL   NL+ +      E +  E +  + + 
Sbjct: 422 ALEIAPVRKGRQMARFVAIGDW-EGPVRVLSLDKDNLLNQVSVLDTERMHIESLMMNEMT 480

Query: 274 CAFE-----------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVS 310
              E                        + +L   L +G +   +++  TGEL+D +   
Sbjct: 481 IGVEMPEGTASSSSAIAKQQQLQNQSNQVLFLNVGLKNGVMKRAVVDPITGELSDTRTRL 540

Query: 311 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
           LG +P+       K+   V A S R  + Y +  +     V+++ + +   F+S   PD 
Sbjct: 541 LGRKPVKFSRVKLKSGNAVLALSSRVWLCYVNQGRYDMVPVSVEPLDNASGFSSEHCPDG 600

Query: 371 LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ-------- 421
           +    E  L I  I+ + +K +  ++P    PRR     Q  T  I S++ +        
Sbjct: 601 IVATSENNLKIFVIEKLSEKFNQVNVPYKCTPRRFVVHPQ--THYIVSIETEHNYLNELP 658

Query: 422 --------SCAEESE---------------------------------MHFVRLLDDQTF 440
                     AE+ +                                 + ++R+L+  ++
Sbjct: 659 TPKENGSNKMAEDKDPEVKREGDDMDYEVDQFSLNQNDKPPKAGDGKWLSYIRVLEPVSY 718

Query: 441 EFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKGRILVFIVED 496
             +    LD  E   S+ +C F D +  V+  VG    +   P + E     +  F    
Sbjct: 719 RTLDLVKLDQDEAAYSLATCIFHDREGEVFLAVGCGKGVQLNPRKVESASIHLYRFTNNG 778

Query: 497 GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
             LQL+ + E +   Y+++ F G+LL  I  ++++Y+ +
Sbjct: 779 QTLQLVYKTEVEEVPYAISHFQGRLLVGIANQLRIYEMV 817



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 15/140 (10%)

Query: 634 RGRLEV--VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHE 690
           +GRL V    +  + E VN     SL        VG    +++ T+NG IG +   +  E
Sbjct: 800 QGRLLVGIANQLRIYEMVNHISKTSL-------SVGGPEVLVYATLNGTIGALVPFVSRE 852

Query: 691 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
              F   L+  +R+    + G +H  +RS+         KN +DGDL E ++ L  T+  
Sbjct: 853 DVDFYTSLELQMRQENPPLCGRDHLAYRSY-----YFPVKNVIDGDLCEQYISLDPTKQQ 907

Query: 751 EISKTMNVSVEELCKRVEEL 770
            I++ ++ S  E+ K++E+L
Sbjct: 908 SIAEELSRSPSEILKKLEDL 927


>gi|71004436|ref|XP_756884.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
 gi|74704394|sp|Q4PGM6.1|RSE1_USTMA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46095609|gb|EAK80842.1| hypothetical protein UM00737.1 [Ustilago maydis 521]
          Length = 1221

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 193/811 (23%), Positives = 354/811 (43%), Gaps = 89/811 (10%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D   ++       Q+    G     S +++R+G+ + E  S +L G+   +W+ 
Sbjct: 420  SLDPILDAKPLNPLAADSPQIFAACGRGARSSFKMLRHGLEVQEAVSSDLPGVPSAVWTT 479

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D +D+++++SF++ T +L++   + +EE    GF + + TL       + L+QV 
Sbjct: 480  KITQQDEYDSYIILSFVNGTLVLSIG--ETIEEVSDSGFLTSSSTLAVQQLGQDALLQVH 537

Query: 152  SGSVRLVSSTSRELRNEWKSP--PG--YSVNVAT-ANASQVLLATGGGHLVYLEIG-DGI 205
               +R V    +++ NEW +P  P    +  VAT  N  QV++A     LVY E+  DG 
Sbjct: 538  PHGIRHVL-VDKQI-NEWATPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQ 595

Query: 206  LTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +    +  
Sbjct: 596  LNEYQERKAMGAGVLTMSMPDCPEGRQRTPYLAVGC-DDSTVRIISLEPNSTLASISIQA 654

Query: 265  EIIPRSVLLCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
               P S + C  E            +++   L +G LL  +L+  TG+LTD +   LG++
Sbjct: 655  LTAPASSI-CMAEMLDATIDRNHATTFVNIGLQNGVLLRTILDAVTGQLTDTRTRFLGSK 713

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             + L          V A S R  + Y+   +L +  +    + H   F++   P+ L   
Sbjct: 714  AVRLIRTKVHGQAAVMALSTRTWLSYTYQDRLQFVPLIFDVLDHAWSFSAELCPEGLIGI 773

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCA-------- 424
                L I TI  +  KL   S+ L   PR+I  H  +   F +   ++++ +        
Sbjct: 774  VGSTLRIFTIPSLASKLKQDSVALSYTPRKIANHPNEQGLFYVVEAEHRTLSPGAQRRRT 833

Query: 425  ----EESEMHFVRLLDDQTFEFISTYP------------------------LDTFEYGCS 456
                +E + H   +LD    EF +                           +D  E   S
Sbjct: 834  EMLGKELKPHQRGVLDLNPAEFGAIRAEAGNWASCIRAVDGVQAQTTHRLEMDDNEAAFS 893

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            I    F S +  V   VG+A  V+       K  +  + ++++G+ L+L+ + E      
Sbjct: 894  IAVVPFASAEKEVMLVVGSAVDVVLSPRSCKKAYLTTYRLLDNGRELELLHKTEVDDIPL 953

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDL 571
             L AF G+LLA I + +++Y     D G ++L  +C +     A+  +  +G  IVVGD+
Sbjct: 954  VLRAFQGRLLAGIGKALRIY-----DLGKKKLLRKCENRSFPTAVVSLDAQGSRIVVGDM 1008

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGA 629
             +SI    YK  E  +   A D    +++   +LD D    A+   N++ +R   N+  +
Sbjct: 1009 QESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNIYVLRLDGNTSRS 1068

Query: 630  TDEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGV 680
             DE+   + +V       G  H    V  F  G ++  L  + +  G    +++  ++G 
Sbjct: 1069 VDEDPTGMTIVHEKPVLMGAAHKASLVAHFFVGDIITSLHRTAMVAGGREVLLYTGLSGS 1128

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG +   +  E    L  L+++LR+    + G +H  +RS     K+V     +DGDL E
Sbjct: 1129 IGALVPFVSKEDVDTLSTLESHLRQENNSIVGRDHLAYRSSYAPVKSV-----IDGDLCE 1183

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +F  LS  + + I+  ++    E+ K++ +L
Sbjct: 1184 TFGLLSPAKQNAIAGELDRKPGEINKKLAQL 1214


>gi|393236715|gb|EJD44262.1| hypothetical protein AURDEDRAFT_137476 [Auricularia delicata
            TFB-10046 SS5]
          Length = 1244

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 188/759 (24%), Positives = 325/759 (42%), Gaps = 84/759 (11%)

Query: 33   NLGPIVDFCVVDLER--QGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIK-GM 88
            ++ PI+D  V++L        Q     G     S R++R+G+ + E  S +L  GI   +
Sbjct: 395  SINPIIDAKVLNLMPTISDTPQFYVACGRGARSSFRLLRHGLEVEENISSDLPSGIPNAV 454

Query: 89   WSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLV 148
            W+ +   DDPFDT++V+SF++ T  L + + + +EE +  GF S   TL       + L+
Sbjct: 455  WTTKIRADDPFDTYIVLSFVNGT--LVLTIGETIEECQETGFLSAEPTLGVQQIGDDALL 512

Query: 149  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 207
            QV    +R + +  R   NEWK P G ++  A  N+ QV++A     LVY E+  DG L 
Sbjct: 513  QVYPHGIRHILADKRV--NEWKVPSGKTIVQAATNSRQVVVALNSAELVYFELDLDGQLN 570

Query: 208  EVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEI 266
            E +  + +   +  L +  + E    +   AVG   D +VRI SL   N +    L    
Sbjct: 571  EYQDRKAMGSVVLALSMAEVPEGRQRTPYLAVGC-EDQTVRIISLDPDNTLETISLQALT 629

Query: 267  IPRS------VLLCAFEGIS---YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
             P S      ++  A   IS   ++   L  G  L  +L+  TGELTD +   LGT+PI 
Sbjct: 630  APPSAICIVAIIDAAVNKISETLFVNIGLTSGLFLRTVLDPVTGELTDTRTRFLGTRPIR 689

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
            L   +      + A S R  + Y+  + L  + +    + ++  F +   PD     K  
Sbjct: 690  LNRVTIAGKPALLALSSRMWLNYAHQEALHLTPLIFDPLDYVSGFTADLCPDGFIGLKGS 749

Query: 378  ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH------ 430
             + I  I  I Q+L    +PL   PR+I     +  F I    +++ ++E+ +H      
Sbjct: 750  TIKIFQITKIGQRLKHEVMPLSYTPRKIAVHPMNGLFYIAESDHRTHSQEA-VHGALQQP 808

Query: 431  -----------------------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                                          VR+++      I    LD  E    I    
Sbjct: 809  DLKKYDRDVLELLPEVFGHPRAPACVWASCVRIVNPVELTTIYRLDLDNNEAAFLIALVP 868

Query: 462  FS-DDSNVYYCVGT---AYVLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLN 515
            FS  D+ +   VGT   A++ P     T G +  + +++DG+ L+L+ + E      SL 
Sbjct: 869  FSARDNELTLVVGTAKDAFLAPRSC--TSGYLRTYRVLDDGRGLELLHKTECDDIPLSLL 926

Query: 516  AFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMK 573
            AF G LL A I + +++Y     D G ++L  +        A+  + T+G  I+ GD  +
Sbjct: 927  AFQGNLLVAGIGKCLRIY-----DMGKKKLLRKAESKLFTTAITSLSTQGARIIAGDAQQ 981

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEGAT 630
            SI   +YK  E  +   A D    W ++  +LD +  +  +   N+F  R +   S    
Sbjct: 982  SIFFCVYKATENRLLVFADDSQQRWTTSQVMLDYNTVVAGDKFGNVFVNRLSDHVSNLVD 1041

Query: 631  DEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIG 682
            D+  G      +   +G  H    +  F  G ++M L  + +  G    +++  ++G IG
Sbjct: 1042 DDPTGTGLLHEKGMFMGAPHKTSMLCHFHVGDIIMSLQRTSLVPGGREVIVYFGLHGTIG 1101

Query: 683  VIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSF 720
            ++     ++ + F   L+ ++R     +   +   WR +
Sbjct: 1102 MLVPFASKEDVDFFTPLEQHMRSENLSLVSRDILAWRGY 1140


>gi|302822731|ref|XP_002993022.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
 gi|300139222|gb|EFJ05968.1| hypothetical protein SELMODRAFT_136264 [Selaginella moellendorffii]
          Length = 1277

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 191/827 (23%), Positives = 333/827 (40%), Gaps = 129/827 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
            N+ PI+DF +VD   + Q Q+  C G  ++GS+RI+RNG  + +        QG+ G+W+
Sbjct: 422  NIAPILDFSLVDYYGEKQDQMFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWT 481

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            +R    DP+  F ++SF+ ETR+L++ L + ++ T+  GF SQ  TL C       + QV
Sbjct: 482  MRYRFKDPYHAFFLISFVEETRVLSVGL-NFVDITDAVGFESQVNTLACGLVEDGWVAQV 540

Query: 151  TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
                V+L S T          S  L   W+  PGY ++V     S+V+LA     L+ L 
Sbjct: 541  WRYEVKLCSPTKAAHPAGVSGSSPLSTTWRK-PGYPISVGAVCRSRVILALARPGLL-LM 598

Query: 201  IGDGI-------LTEVKHAQLEYEISCLDINPIGE--NPSYSQIAAVGMWTDISVRI--- 248
            +G          L E++   +E EISC+ I P G+   P    IA +     +   +   
Sbjct: 599  LGTTQTSAESFELVELQLCMMEAEISCISI-PQGDISIPVPPTIAGLHAGNTVPAGVDLG 657

Query: 249  -------------------------FSLPDLNLITKEHLGGEI---IPRSVLLCAFEGIS 280
                                     F++  ++LIT   +G  +   IP+ V L  F+ + 
Sbjct: 658  NVCVVGTHKPSVELLSIVPGDKFAPFAVGQVSLITS--VGTAVSGCIPQDVRLALFDRL- 714

Query: 281  YLLCALGDGHLLNF--------LLNMKTGELTDRKKVSLGTQPITLRTF-SSKNTTHVFA 331
            Y+L  L +G LL +        L+  K  EL       LG  P+ L    +      + A
Sbjct: 715  YILAGLRNGMLLRYEWPEDTPSLVLSKPAELHLIAARRLGVSPVCLVPLEACALRADIIA 774

Query: 332  ASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLH 391
             SDRP ++  + K++ Y++++ +  +H  P  S   P  +    +  L +  ++  + L+
Sbjct: 775  LSDRPWLLQMA-KRISYTSISFQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQSRTLN 833

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ-----SCAEESE-----------------M 429
            ++ + LG   RR+ +  +S    +  L ++      C E                    M
Sbjct: 834  VQKLRLGCTGRRVLYHPESGVLIVLRLLSEHRSDVCCIEPLSGAVLCVHPFGVGQIVKCM 893

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN------- 482
              ++L D+Q    + T   DT     ++++   ++    Y+CV      P  +       
Sbjct: 894  ELMKLGDEQLL-LVGTAS-DTRR---AVMATGEAERQAFYFCVSNTGYFPSSSRGVLVVL 948

Query: 483  -------------------EPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGK-LL 522
                               E + G  +VF  +D      A     G V ++ ++ G+ +L
Sbjct: 949  YLDAPPPPSPHSPMSSPASESSGGASIVFQPDDYCFVPRANVGLPGPVNAVASYLGQYVL 1008

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
            A     +        D+  R  +         +   +  R   I VGD    + L  Y+ 
Sbjct: 1009 ACAGNHLFCLGIASMDESPRRWKKLASIKTRFVITSISVRFTTIAVGDCRDGVLLFTYRE 1068

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLGA--ENNFNLFTVRKNSEGATDEERGRLEVV 640
            +   +E    D     +S   ++D D  +      NF   +  + +EG    E+  LE  
Sbjct: 1069 DSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRHGNFCALSTNEETEGNGSPEK-NLEAH 1127

Query: 641  GEYHLGEFVNRFR--HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
              +H+GE     R    S  +    S    +  VI  T+ G + +   +  E+Y  L+ L
Sbjct: 1128 CWFHIGEVCTTVRKVRTSRFLCKDTSRECSVSCVIATTLLGSVFIFVRITGEEYSLLQAL 1187

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLS 745
            Q  L  +      L ++  R F  + +    K  LDGDL+E FL+L+
Sbjct: 1188 QRRLSFLPATAPVLGNDHAR-FRGQGRPAGVKEVLDGDLLEQFLELT 1233


>gi|410926437|ref|XP_003976685.1| PREDICTED: splicing factor 3B subunit 3-like, partial [Takifugu
            rubripes]
          Length = 1020

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 159/665 (23%), Positives = 286/665 (43%), Gaps = 78/665 (11%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQESLSPIMSCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C       LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGDEALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGEKGSMGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEMHFVRLLD 436
            R+ + H E            + T A  + + Q  AEE             +EM     L+
Sbjct: 786  RKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMA-AAFLN 844

Query: 437  DQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED 496
            +   E I   P        S++        N    V    V  E+NE         +   
Sbjct: 845  ENLPEAIFGAPKAGAGQWASLVRL-----INPIQGVTLDQVQLEQNEAAFXXXXRLVSGG 899

Query: 497  GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-- 554
             KL+ + +   + A  ++  F G++L  + + +++Y     D G ++L  +C  + HI  
Sbjct: 900  EKLEFVHKTPVEDAPLAIAPFQGRVLVGVGKLLRIY-----DMGKKKLLRKC-ENKHIPN 953

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            +   + T G  ++V D+ +S+  + Y+  E  +   A D    W++   +LD D    A+
Sbjct: 954  VVTSIHTSGQRVIVTDVQESLFWVRYRRNENQLIIFADDTYPRWVTTACLLDYDTMASAD 1013

Query: 615  NNFNL 619
               N+
Sbjct: 1014 KFGNI 1018


>gi|443922899|gb|ELU42250.1| splicing factor 3B subunit 3 [Rhizoctonia solani AG-1 IA]
          Length = 1212

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 197/837 (23%), Positives = 343/837 (40%), Gaps = 131/837 (15%)

Query: 14   LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQ-GQVVTCSGAYKDGSLRIVRNGI 72
            LNL     G      +R      IV + +V    Q    Q     G     S R++R+G+
Sbjct: 420  LNLFGPTSGGMSAFTQRSDEPSLIVSYRIVPATLQSDTPQFYLACGRGARSSFRMLRHGL 479

Query: 73   GINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFC 131
             + E  S EL G+  G+W+++ +  D +D ++++SF++ T +L++   + +EE    GF 
Sbjct: 480  EVEESVSSELPGVPNGVWTVKVNDGDQYDKYIILSFVNGTLVLSIG--ETIEEVADTGFL 537

Query: 132  SQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRN-----EWKSPPGYSVNVATANAS 185
            S   TL       N  L+QV  G VR V  +  +L +     EW++P G  V  AT N  
Sbjct: 538  SSAPTLAVQQLADNGGLIQVHPGGVRHVRPSQGDLASTAGVTEWRAPQGRQVASATTNTR 597

Query: 186  QVLLATGGGHLVYLEIG-DGILTEVKHAQ-LEYEISCLDIN--PIGENPSYSQIAAVGMW 241
            QV +A   G LVY E+  +G+L E    + +   + C+ I   P G  P+ S        
Sbjct: 598  QVCVALNSGELVYFELDLNGVLQEYGEMRAVGSAVVCMSIAEVPEGRQPNGSN------- 650

Query: 242  TDISVRIFSLPDLNLITKEHLGGEIIPRSV--LLCAFEGISYLLCALGDGHLLNFLLNMK 299
                   F  P ++L      G   + R V  L+      + ++ A G  ++  F     
Sbjct: 651  ------HFLGPRVDLGNHLVTG---LSRHVWMLVVGLTNETSVVGAHGTSNVYFF----- 696

Query: 300  TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
                       LGT+P+ L   S +  T + A S R  + Y+    L +S +  + + H 
Sbjct: 697  -----------LGTRPVRLTRVSVQRNTCILALSSRSWLNYTHQNLLRFSPLIYENLDHA 745

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
              F++   P+ L       L I  I  +  KL   ++PL   PR+I    + + F +   
Sbjct: 746  WSFSAELCPEGLIGIAGSVLRIFQIPKLSDKLKQVTMPLSYTPRKIAVHPEHQLFYVIES 805

Query: 419  KNQSCAEESE----MHFVR--------LLD-----------------------DQTFEFI 443
             +++   E++       VR        L+D                       D T  F 
Sbjct: 806  DHRTWGSEAKNKRLAELVRAGRQIDQELVDLPAEDFGLPRAGAGQWASCIRIIDPTEVFC 865

Query: 444  ST----YPLDTFEYGCSILSCSFSDDSN-VYYCVGTAY---VLPEE--NEPTKGRILVFI 493
            S       LD  E   S+    F+   N ++  VGTA    VLP +     T G ++   
Sbjct: 866  SATLFKIELDNNESAFSVAVVPFAARENELFLVVGTAKDTNVLPRQCVGAVTSGSLVKLG 925

Query: 494  VEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
                 L    + E      +L    G+L A + + +++Y+      G ++L  +  + G 
Sbjct: 926  WSTHILTRPIQTEVDDVPLALLGIKGRLCAGVGKALRIYEM-----GKKKLLRKSENKGF 980

Query: 554  ILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
              A+   T +G  I+VG++ +S+    YK E   +   A D +A W+++  ++D D    
Sbjct: 981  ATAIVTLTSQGSRIIVGEMQESVHYATYKPESNRLLVFADDTSARWVTSAALVDYDTVAV 1040

Query: 613  AENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNRFRH 654
             +   N+F  R     S+   D+  G               + +++  Y++G+ V     
Sbjct: 1041 GDKFGNIFVNRLPANISQQVDDDPTGAGIMHEREFLHGAPHKTKLLAHYNVGDIVTSVHR 1100

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLN 713
             +LV        G    V +  ++G IGV+  L  ++ + F+  L+ ++R     + G +
Sbjct: 1101 AALVP-------GGRDVVAYTGLHGTIGVLIPLASKEDVDFITTLEQHMRSEHSSLVGRD 1153

Query: 714  HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            H  +R +      V  K  +DGDL E F  L  T+   I+  ++ +V E+ K++E L
Sbjct: 1154 HLAYRGY-----YVPVKAVVDGDLCERFAMLPSTKQKSIAGELDRTVGEVLKKLEGL 1205


>gi|154295205|ref|XP_001548039.1| pre-mRNA splicing factor 3b [Botryotinia fuckeliana B05.10]
          Length = 1020

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 158/608 (25%), Positives = 271/608 (44%), Gaps = 67/608 (11%)

Query: 12  IKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNG 71
           I  + +P    S VE ++   ++ P++D  V +L  +   Q+ +  G     + R +++G
Sbjct: 404 IYFHPRPAENLSLVESID---SMNPLMDCKVANLTDEDAPQIYSICGTGARSTFRTLKHG 460

Query: 72  IGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
           + ++E    EL G+   +W+ + +  D +D ++++SF + T +L++   + +EE    GF
Sbjct: 461 LEVSEIVESELPGVPSAVWTTKLTRGDTYDAYIILSFSNGTLVLSIG--ETVEEVTDTGF 518

Query: 131 CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
            S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N  QV +A
Sbjct: 519 LSSAPTLAVQQLGEDSLIQVHPKGIRHIRADHR--VNEWAAPQHRSIVAATTNERQVAVA 576

Query: 191 TGGGHLVYLEI-GDGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRI 248
              G +VY E+  DG L E  +  ++   ++CL +  + E    SQ  AVG   D +VRI
Sbjct: 577 LSSGEIVYFEMDSDGSLAEYDEKKEMSGTVTCLSLGEVPEGRQRSQFLAVGC-DDSTVRI 635

Query: 249 FSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS------YLLCALGDGHLLNFLLNMKTG 301
            SL PD  L  K        P ++ + A    S      YL   L  G  L  +L+  TG
Sbjct: 636 LSLDPDSTLENKSVQALTSPPNALSIMAMSDSSSGGSTLYLHIGLYSGVYLRTVLDEVTG 695

Query: 302 ELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS--NKKLLYSNVNLKEVSHM 359
           EL+D +   LG +P+ L   + +  T V A S RP + YS    K  + + ++   +   
Sbjct: 696 ELSDTRTRFLGPKPVKLFRVAVQGQTAVLALSSRPWLGYSDPVTKGFMLTPLDYPALEWG 755

Query: 360 CPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
             F+S    + +   +   L I +I+ +   L   SIPL   PRR     +   F +   
Sbjct: 756 WNFSSEQCTEGMVGIQGQNLRIFSIEKLTDNLLQESIPLTYTPRRFVRHPEHACFYVIEA 815

Query: 419 KNQSCAEESEMHFVRLLDDQTF-----------EF------------------------I 443
            N   +  ++    +LL+D +            EF                        +
Sbjct: 816 DNNILSPATKQ---KLLEDPSVTNGDATVLPPEEFGYPRGTNHWASCISVVDPVTEKKVL 872

Query: 444 STYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-L 499
           ST  L+  E   SI   +F S +   + CVGT   ++      + G I V+   EDGK L
Sbjct: 873 STIHLEDNECAVSIAVVAFASQEDETFLCVGTGKDMVVSPRSFSAGFIHVYRFHEDGKEL 932

Query: 500 QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 559
           + I + + +    +L AF G+LLA + + +++Y   +R    R+ QSE   +   + + +
Sbjct: 933 EFIHKTKVEEPPMALLAFQGRLLAGVGKDLRIYDLGMR-QLLRKAQSEVAPN---MIVGL 988

Query: 560 QTRGDFIV 567
           QT+G  I+
Sbjct: 989 QTQGSRII 996


>gi|444722328|gb|ELW63026.1| Splicing factor 3B subunit 3 [Tupaia chinensis]
          Length = 840

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 179/777 (23%), Positives = 320/777 (41%), Gaps = 137/777 (17%)

Query: 74  INEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS 132
           ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + +EE    GF  
Sbjct: 115 VSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLG 172

Query: 133 QTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATG 192
            T TL C     + LVQV    +R + +  R   NEWK+P   ++     N  QV++A  
Sbjct: 173 TTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKCAVNQRQVVIALT 230

Query: 193 GGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFS 250
           GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG+  D +VRI S
Sbjct: 231 GGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIIS 289

Query: 251 LPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISYLLCALGDGHLLN 293
           L   + +  + L  + +P +   LC  E                G  YL   L +G LL 
Sbjct: 290 LDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLR 347

Query: 294 FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 353
            +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS   +   + ++ 
Sbjct: 348 TVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSY 407

Query: 354 KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR 411
           + +     F S   P+ +       L I  ++ +  +  + + PL   PR+ + H E + 
Sbjct: 408 ETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNN 467

Query: 412 -----------TFAICSLKNQSCAEE-------------SEM------------------ 429
                      T A  + + Q  AEE             +EM                  
Sbjct: 468 LIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPK 527

Query: 430 -------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEE 481
                    +R+++      +    L+  E   S+  C FS+    +Y  VG A  L   
Sbjct: 528 AGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILN 587

Query: 482 NEPTKGRILVF--IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
                G  +    +V +G KL+ + +   +    ++  F G++L  + + +++Y     D
Sbjct: 588 PRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----D 642

Query: 539 DGTRELQSECGHHGHILALY---VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            G ++L  +C  + HI A Y   +QT G  ++V D+ +S   + YK  E  +   A D  
Sbjct: 643 LGKKKLLRKC-ENKHI-ANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTY 700

Query: 596 ANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
             W++   +LD D   GA+   N+  VR   N+    DE+                    
Sbjct: 701 PRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDED-------------------- 740

Query: 654 HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
                        G       G +NG          + + F + ++ +LR     + G +
Sbjct: 741 -----------PTGNKALWDRGLLNGA-------SQKDHDFFQHVEMHLRSEHPPLCGRD 782

Query: 714 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
           H  +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 783 HLSFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 834


>gi|388855100|emb|CCF51231.1| probable splicing factor 3B subunit 3 [Ustilago hordei]
          Length = 1221

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 182/810 (22%), Positives = 342/810 (42%), Gaps = 87/810 (10%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+   +W+ 
Sbjct: 420  SLDPILDAKPLNPLASDSPQIFVACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTT 479

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D +D+++++SF++ T +L++   + +EE    GF + + TL       + L+QV 
Sbjct: 480  KITRQDEYDSYIILSFLNGTLVLSIG--ETIEEVGDSGFLTSSPTLAVQQLGEDALLQVH 537

Query: 152  SGSVRLVSSTSRELRNEWKSPP---GYSVNVAT--ANASQVLLATGGGHLVYLEIG-DGI 205
               +R +    +   NEW +P    G    +     N  QV +A     LVY E+  DG 
Sbjct: 538  PYGIRHILVDKQV--NEWATPSLPNGVQTTIVAICTNERQVAVALSSNELVYFELDMDGQ 595

Query: 206  LTEVKHAQLE-YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E +  +     +  + +    E    +   A G   D +VRI SL   + +    +  
Sbjct: 596  LNEYQDRKATGATVLTMSMADCPEGRQRTPYLAAGC-DDSTVRIISLEPASTLASISIQA 654

Query: 265  EIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
               P S +  A          +  +++   L +G LL  +L+  TG+LTD +   LG++ 
Sbjct: 655  LTAPASSICVAEMKDATVDRNQATTFVNIGLSNGVLLRTVLDAMTGQLTDTRTRFLGSKA 714

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            + L        + V A S R  + ++   +L ++ +    + H   F++   P+ L    
Sbjct: 715  VRLIRTKVHGQSAVMALSTRTWLSFTYQSRLQFTPLIFDALDHAWSFSAELCPEGLIGIV 774

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRRICH-----------QEQSRTFAICSLKNQSC 423
               L I TI  +  KL   S+ L   PR+I H           +   RT +  + + +  
Sbjct: 775  GSTLRIFTIPSLASKLKQDSVALSYTPRKIAHHPDEQGLFYVVEADRRTLSPGAQRRRVE 834

Query: 424  AEESEMH--------------------------FVRLLDDQTFEFISTYPLDTFEYGCSI 457
            A E E+                            VR++D    +      LD  E   S+
Sbjct: 835  ALEKELKPHQRGVLDLKPAEFGLIRGEAGNWASCVRVVDGPQSQTTHKIELDDNEAAFSV 894

Query: 458  LSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYS 513
                F S +   +  VG+A  V+       K  +  + + +G  +L++  + E       
Sbjct: 895  AIVPFASAEKQSFLVVGSAVDVVLSPRSFKKAYLTTYRLINGGRELEVHHKTEIDDIPLV 954

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLM 572
            L  F G+LLA + + +++Y     D G ++L  +C +     A+  +  +G  IVVGD+ 
Sbjct: 955  LRPFQGRLLAGVGKALRIY-----DLGKKKLLRKCENKSFPTAIVSLDAQGSRIVVGDMQ 1009

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG--AT 630
            +SI    YK  E  +   A D    +++   +LD D    A+   NL+ +R +++   + 
Sbjct: 1010 ESIVFTSYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNLYVLRIDADTSRSV 1069

Query: 631  DEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVI 681
            DE+   + +V       G  H    +  +  G ++  L  + +  G    +++  ++G I
Sbjct: 1070 DEDPTGMTIVHEKPVLMGAAHKATLLAHYFVGDIITSLNRTVMVPGGREVLMYTGISGTI 1129

Query: 682  GVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            G +   +  E    L  LQT LR+    + G +H  +RS     K+V     +DGDL E+
Sbjct: 1130 GALVPFVSKEDVDTLSTLQTQLRQENNSLVGRDHLAYRSSYAPVKSV-----IDGDLCET 1184

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            F  L   + + I++ ++    E+ K++ +L
Sbjct: 1185 FGLLQPAKQNAIAQELDRKPSEINKKLAQL 1214


>gi|254572247|ref|XP_002493233.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|238033031|emb|CAY71054.1| Protein involved in pre-mRNA splicing [Komagataella pastoris GS115]
 gi|328352752|emb|CCA39150.1| Pre-mRNA-splicing factor rse1 [Komagataella pastoris CBS 7435]
          Length = 1179

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 203/797 (25%), Positives = 352/797 (44%), Gaps = 86/797 (10%)

Query: 34   LGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLR 92
            L PI D     L  Q + Q+V  SG     SL+++++ + INE AS EL G    +++ +
Sbjct: 409  LNPITD----GLLDQEKSQLVLTSGGSSRSSLKLLKHELAINELASSELPGSALNIFTTK 464

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
             S  D +D ++V+SFI  T +L++   + ++E    G   Q  T+       N L QV S
Sbjct: 465  VSHKDQYDKYMVISFIDGTLVLSIG--ESVDEVSDSGLELQVSTIAVQQVGRNSLAQVHS 522

Query: 153  -GSVRL--VSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILT 207
             G V L  ++  S E ++ W+ P G  + VA+   SQ+ L      LVY EI   D ++ 
Sbjct: 523  HGIVHLKGLNEPSFE-KSLWQPPVGAEILVASMTNSQIALGLSNRELVYFEIDEYDQLIE 581

Query: 208  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGG 264
              +  ++   IS L +  I +    S   AVG   D++++I S  P+  L +++ + L  
Sbjct: 582  HKERKEMSGRISALSLGQIPDGRLRSPFLAVG-CNDMTIKILSTDPNSCLEVLSLQALSS 640

Query: 265  EIIPRSVLLCAFE-GISYLL-CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 322
              IP  + +   E G  Y +   L  G  +  LLN  +G+L+D +   LG + ++L    
Sbjct: 641  --IPSDLQITNLEQGAGYFVHIGLDSGIYIRTLLNRISGQLSDTRVNYLGPKRVSLSPVK 698

Query: 323  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE-LTI 381
                  V A SD   + Y+S      + +   + ++ C F S   P++  +    E LTI
Sbjct: 699  IFGKNLVLAFSDTSYLSYNSGFDAKITPLCDGKFTYGCGFISEECPENGVVGVSAENLTI 758

Query: 382  GTIDDIQK-LHIRSIPLGEHPRRIC-----------HQEQSRTFAICSLKNQSCAE---- 425
             TID +   ++++ IPL   PRRI             Q  ++   + S+  +   E    
Sbjct: 759  FTIDQLDTDMNVKDIPLTFTPRRITLVSEDVVVVTESQHYTKNPYLNSVATEESRELYQQ 818

Query: 426  ---ESEMHF---VRLLDDQTFEFISTYPLDT--FEYGCSILSCSFSDDSNVYYCVGTAY- 476
               E   H+   +  +D Q+ + I    LD     +G + +S +   D  VY+ V  +  
Sbjct: 819  IGYEKSSHWSSVIETVDIQSQQVIQAINLDKELAIFGSTKVSFASHPD-EVYFIVSCSVE 877

Query: 477  --VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKW 534
              +LP  N+ T+ R    I E+G LQ +   ET   VYSL  F GKLLA +   + LY  
Sbjct: 878  QELLPNINKGTQLRTYK-ITEEG-LQFLHSTETDQLVYSLTEFQGKLLAGVGNLLVLYDL 935

Query: 535  MLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 594
             L+    + L     H        +  +G  IV+ D+ +S   L +  EE        D 
Sbjct: 936  GLKKLLKKSLTQTSFHQ----ITSIDYQGFRIVISDMKQSSMFLSFNAEENRFISLCDDI 991

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGE--------- 642
                ++  ++LD    +  +    +  +R   K ++   D    + +++GE         
Sbjct: 992  TQRHITCSKMLDYSTVVTGDRFGTISVLRCPEKVNKDHLDYIEAKSKMIGECPFKLKQLA 1051

Query: 643  -YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL--PHEQYLFL---E 696
             Y++ + V     GSL        VG   ++I+  + G IG+++ +  P +   F+   +
Sbjct: 1052 SYYVQDVVTSLSRGSLT-------VGGKQSIIYTGLQGTIGILSPIQTPSDIDFFVSLED 1104

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             L+  L K    + G +H ++R +      V A+  +DGDLI+ F  L  +    IS  +
Sbjct: 1105 SLRQELLKSKHLLTGRSHLKYRGY-----YVPAQGVVDGDLIQYFYQLPDSTKQFISTKL 1159

Query: 757  NVSVEELCKRVEELTRL 773
            + S  E+ +++  +  L
Sbjct: 1160 DRSTLEIERKISIMRSL 1176


>gi|392580116|gb|EIW73243.1| hypothetical protein TREMEDRAFT_37240 [Tremella mesenterica DSM 1558]
          Length = 1214

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 190/813 (23%), Positives = 345/813 (42%), Gaps = 96/813 (11%)

Query: 33   NLGPIVDFCVVDLERQGQG--QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMW 89
            +L PI+D  VV+L  Q     Q+    G     + R +++G+ I +  +  L G+   +W
Sbjct: 417  SLDPILDAQVVNLLGQSSDTPQIYAACGRGPRSTFRTLKHGLEIQQIVASPLPGVPNAVW 476

Query: 90   SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
            +L+ + +D FD+++V+SF + T +L++   + +EE    GF S   TL         L+Q
Sbjct: 477  TLKLTEEDEFDSYIVLSFPNGTLVLSIG--ETIEEVNDTGFLSSGPTLAVQQLGDAGLLQ 534

Query: 150  VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE 208
            V    +R + +  R   +EW  PPG ++  AT N  QV++A     LVY E+  +G L+E
Sbjct: 535  VHPYGLRHIRAADRV--DEWACPPGSAITAATTNKRQVVIALSTAELVYFELDPEGSLSE 592

Query: 209  VKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEI 266
             +  + L    +C+ I  + E    +   AVG   + +V + SL P+  L T        
Sbjct: 593  YQDKKSLPGNATCVSIAEVPEGRRRTPFLAVGC-DNQTVHVISLEPESTLTTLSLQALTA 651

Query: 267  IPRSVLLCAFEGIS--------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
             P S+ L      S        +L   L +G LL  +++   G L+D +   LG +P  L
Sbjct: 652  PPASICLAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVEGSLSDTRLRFLGAKPPKL 711

Query: 319  RTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE 378
               S   +  V A S R  ++Y+    L    +    + +    ++A  P+ L       
Sbjct: 712  VRSSIHGSPSVMAFSSRAWLLYTYQDMLQTQPLIYDALEYASTLSAAMCPEGLIGISGNT 771

Query: 379  LTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTF-------------AICSLKNQSCA 424
            L I TI  + +KL   S+ L   PR+      S  F             AI  + +Q  A
Sbjct: 772  LRIFTIPRLGEKLKQDSMSLTYTPRKFISHPFSTIFYMIESDHRVLGPKAIQRIVSQKKA 831

Query: 425  EESEM-----------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCS 461
                +                         +R+LD  T + +ST  LD  E   S+    
Sbjct: 832  AGDRVDGSILELPPSEFGRPRAGPGHWASLIRILDPLTNQTVSTIELDEDEAAFSLTIAY 891

Query: 462  FSDDSN-VYYCVGTAYVLPEENEPTK-GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAF 517
            F + +      VGTA          K G + V+ I E+G+ L+ + + +       +  F
Sbjct: 892  FENMAGEPSLVVGTAVKTTLTPRGCKEGWLRVYAIKENGRTLEFMHKTKLDEIPLCVAGF 951

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSIS 576
             G LL    + ++LY     + G + L  +C ++     +  +   G  I+VGD+ +S  
Sbjct: 952  QGYLLVGAGKSLRLY-----EAGKKALLRKCENNSFPTVIATINVIGARIIVGDMQESTF 1006

Query: 577  LLIYKHEEGAIEER-----ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN---SEG 628
              +Y+    +I  R       D    +++ V  +D D     +   N+F  R +   SE 
Sbjct: 1007 FCVYR----SIPTRQLLVFGDDTQPRFLTCVTNVDYDTVACGDKFGNVFVNRMDQAVSEK 1062

Query: 629  ATDEERG------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----TVIFGTVN 678
              D+  G      +  ++G  H    +  ++ GS+V  L  + V  +P     +++ T++
Sbjct: 1063 VDDDPTGAGILHEKGFLMGAAHKTTLIAHYQVGSVVTSL--TKVSLVPGGRDVLVYTTIS 1120

Query: 679  GVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            G +G +   +  +   F+  L+ ++R     + G +H  +R +      V     +DGDL
Sbjct: 1121 GAVGALVPFISMDDVEFMTTLEMHMRSQNISLVGRDHLAYRGYYAPVMGV-----VDGDL 1175

Query: 738  IESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +++  L  T+   I+  ++ SV ++ K++E++
Sbjct: 1176 CDAYSSLPYTKQSSIANELDRSVGDVLKKLEQM 1208


>gi|323508292|emb|CBQ68163.1| probable splicing factor 3B subunit 3 [Sporisorium reilianum SRZ2]
          Length = 1221

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 186/811 (22%), Positives = 347/811 (42%), Gaps = 89/811 (10%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+   +W+ 
Sbjct: 420  SLDPILDAKPLNPLASDSPQIFAACGRGARSSFKMLRHGLEAQEAVSSDLPGVPSAVWTT 479

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D  D+++++SF++ T +L++   + +EE    GF + + TL       + L+QV 
Sbjct: 480  KITRQDEHDSYIILSFVNGTLVLSIG--ETIEEVSDSGFLTSSSTLAVQQLGEDALLQVH 537

Query: 152  SGSVRLVSSTSRELRNEWKSP--PG--YSVNVAT-ANASQVLLATGGGHLVYLEIG-DGI 205
               +R +    +++ NEW +P  P    +  VAT  N  QV++A     LVY E+  DG 
Sbjct: 538  PHGIRHIL-VDKQI-NEWATPSLPNGRQTTIVATCTNERQVVVAFSSNELVYFELDMDGQ 595

Query: 206  LTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +    +  
Sbjct: 596  LNEYQERKAMGAAVLTMSMADCPEGRQRTPYLAVGC-DDSTVRIISLEPNSTLASISIQA 654

Query: 265  EIIPRSVLLCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
               P S + C  E            +++   L +G LL  +L+  TG+LTD +   LG++
Sbjct: 655  LTAPASSI-CMAEMHDATIDRNHATTFVNIGLQNGVLLRTVLDAVTGQLTDTRTRFLGSK 713

Query: 315  PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
             + L        + V A S R  + ++   +L +  +    + H   F++   P+ L   
Sbjct: 714  AVRLIRTKVHGQSAVMALSTRTWLSFTYQDRLQFVPLIFDALDHAWSFSAELCPEGLIGI 773

Query: 375  KEGELTIGTIDDI-QKLHIRSIPLGEHPRRICH-----------QEQSRTFAICSLKNQS 422
                L I T+  +  KL   S+ L   PR+  H           + + RT +  + + ++
Sbjct: 774  VGSTLRIFTMPSLASKLKQDSVALSYTPRKFAHHPNEQGLFYVVEAEHRTLSPGAQRRRT 833

Query: 423  CAEESEMH--------------------------FVRLLDDQTFEFISTYPLDTFEYGCS 456
               E E+                            VR++D    +      LD  E   S
Sbjct: 834  EMLEKELKPHQRGVLDLNPAEFGLIRAEAGNWASCVRVVDGVQSQTTHKLELDDNEAAFS 893

Query: 457  ILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVY 512
            +    F S +      VG+A  V+       K  +  + +  +G+ L+++ + E      
Sbjct: 894  VAVVPFASAEKEAMLVVGSAVDVVLSPRSFKKAYLTTYRLTNNGRELEVLHKTEVDDIPL 953

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDL 571
             L  F G+LLA I + +++Y     D G ++L  +C +     A+  +  +G  IVVGD+
Sbjct: 954  VLRPFQGRLLAGIGKALRIY-----DLGKKKLLRKCENKSFATAIVSLDAQGSRIVVGDM 1008

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGA 629
             +SI    YK  E  +   A D    +++   +LD D    A+   N++ +R   ++  +
Sbjct: 1009 QESIIFTSYKPLENRLVTFADDVMPKFVTRCAMLDYDTVAAADKFGNVYVLRIDADTSRS 1068

Query: 630  TDEERGRLEVV-------GEYHLGEFVNRFRHGSLVMRLPDSDV--GQIPTVIFGTVNGV 680
             DE+   + +V       G  H    V  F  G +V  L  + +  G    +++  V+G 
Sbjct: 1069 VDEDPTGMTIVHEKPVLMGAAHKATLVAHFFVGDIVTSLNRTVMVPGGREVLLYTGVSGT 1128

Query: 681  IGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG +   +  E    L  L+++LR+    + G +H  +RS     K+V     +DGDL E
Sbjct: 1129 IGALVPFVSKEDVDTLSTLESHLRQENSSLVGRDHLAYRSSYAPVKSV-----IDGDLCE 1183

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +F  L   + + I+  ++    E+ K++ +L
Sbjct: 1184 TFGLLPPAKQNAIATELDRKPSEINKKLAQL 1214


>gi|47212603|emb|CAF93045.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1171

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 171/749 (22%), Positives = 303/749 (40%), Gaps = 148/749 (19%)

Query: 3    TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
            TF+  P+ L  L L           ++   +L PI+   + DL  +   Q+    G    
Sbjct: 384  TFFFQPRPLKNLVL-----------VDEQESLSPIMSCQIADLANEDTPQLYVACGRGPR 432

Query: 63   GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
             +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433  STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122  LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491  VEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVRCA 548

Query: 182  ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549  VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240  MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
            +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609  L-ADNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGEKASIGFLYL 665

Query: 283  LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
               L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666  NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343  NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
              +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726  QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402  RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
            R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786  RKFVIHPETNNLVLIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430  ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                                VRL++      +    L+  E   S+  C F +  + +Y 
Sbjct: 846  NLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFPNTGDDWYV 905

Query: 472  -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             VG A  ++      T G I  + +  G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906  LVGVARDMILNPKSVTGGFIYTYRLVAGGEKLEFVHKTPVEDVPLAIAPFQGRVLVGVGK 965

Query: 528  KIQLY----KWMLR-------------DDGTRELQSECGHHG------------------ 552
             +++Y    K +LR             D+GT  L + C H G                  
Sbjct: 966  LLRIYDMGKKKLLRKCENKPARRRRFQDEGTTSL-AHCNHVGPLDGPSSDPGPQLGQLTA 1024

Query: 553  -----------------HI--LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
                             HI  L   + T G  ++V D+ +S+  + Y+  E  +   A D
Sbjct: 1025 SGGPMTTSSQPIRQSRQHIPNLVTGIHTTGQRVIVTDVQESLFWVRYRRNENQLIIFADD 1084

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTV 622
                W++   +LD D    A+   N+  V
Sbjct: 1085 TYPRWVTTACLLDYDTMASADKFGNISIV 1113


>gi|330790247|ref|XP_003283209.1| CPSF domain-containing protein [Dictyostelium purpureum]
 gi|325086890|gb|EGC40273.1| CPSF domain-containing protein [Dictyostelium purpureum]
          Length = 1233

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 197/404 (48%), Gaps = 31/404 (7%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
           +L PIVDF V+D+ R+   Q+ +  G  KD SL+++R+G+ ++   + +L G+  G+W++
Sbjct: 403 SLSPIVDFKVLDIVREENPQLYSLCGTSKDSSLKVLRHGLSVSTITNAKLPGVPSGIWTV 462

Query: 92  ----RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
                 S  D  D ++VVSF+  T +L++   + ++E    G    T TL       + +
Sbjct: 463 PKSNSPSAQDQTDKYIVVSFVGSTSVLSVG--ETIQENHESGILESTTTLLIGSMGEDSI 520

Query: 148 VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGIL 206
           +QV     R + S  R   NEW++P   ++  AT N +Q+++A  GG ++Y E+   G L
Sbjct: 521 LQVFPTGFRFIRSDMRT--NEWRAPGRKTIVRATCNQNQLVIALSGGEVIYFELDQSGGL 578

Query: 207 TEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL--GG 264
           TE+       +I+C++I+PI +  S ++  A+  W +  VR+ SL   N + +  +    
Sbjct: 579 TEIIKKDFRRDIACIEISPIPKGRSMARFLAISDW-EGPVRLLSLDRDNCLGQISMLDTD 637

Query: 265 EIIPRSVLLCAFE-----------------GISYLLCALGDGHLLNFLLNMKTGELTDRK 307
           ++   S+ +   +                 G  +L   L +G +    L+  +GEL+D +
Sbjct: 638 KVYIESLSIVEMQVNEAGVDNFKVSSQNMGGSLFLFVGLKNGVIKRATLDNYSGELSDIR 697

Query: 308 KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
              LG +P+ L     +    + A S R  + Y++  KL    ++++ + +    +S   
Sbjct: 698 TRLLGRRPVKLFKIKVRGGNGILALSSRVWLNYANQGKLEIVPLSVEPLENASNLSSDQS 757

Query: 368 PDSLAIAKEGELTIGTIDDIQKL-HIRSIPLGEHPRRICHQEQS 410
           P+S+    E  + I TID +  L +  +I LG  PRR     Q+
Sbjct: 758 PESIVATSEDHIIIFTIDKLGDLFNQETIKLGATPRRFIVHPQT 801



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 42/364 (11%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DSNVYYCVG---TAYVLPEENEPTK 486
            ++++D  + +   +Y LD  E G S+ + SFSD  D  ++  VG      + P+  E   
Sbjct: 881  IKIIDPISHQVYESYQLDENEAGFSLCTLSFSDRGDGEIFLVVGCGNNVILNPKSCESAS 940

Query: 487  GRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
              +  F  E  KLQL+ + E +  VY++  F G+L A + + I++Y     D G ++L  
Sbjct: 941  INLYKFTEEGKKLQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIY-----DMGKKKLLR 995

Query: 547  ECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            +C        +  + + GD +VVGD+ +SI  + YK  E  +   A D    W+++  +L
Sbjct: 996  KCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKKLENMLYVFADDLAPRWITSSVML 1055

Query: 606  DDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGE 647
            D D   GA+   N+F +R                  K   G  +    +LE +     G+
Sbjct: 1056 DYDTVAGADKFGNIFILRLPSNVSDEVEEDPTGSKLKFESGLLNGAPHKLEHIANIFAGD 1115

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 706
             +      SLV       VG    +++ T++G IG +I  +  E   F   L+  LR   
Sbjct: 1116 AITTLNKTSLV-------VGGSDVLLYTTISGAIGALIPFVSREDVDFFSSLELQLRNEH 1168

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G +H  +RS+         KN +DGDL E F+ L   +  +I++ ++ S  E+ K+
Sbjct: 1169 APLCGRDHLAYRSY-----YFPVKNIIDGDLCEQFITLDPQKQRQIAEELSRSPSEVLKK 1223

Query: 767  VEEL 770
            +E++
Sbjct: 1224 LEDI 1227


>gi|399216895|emb|CCF73582.1| unnamed protein product [Babesia microti strain RI]
          Length = 1232

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 181/856 (21%), Positives = 335/856 (39%), Gaps = 141/856 (16%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
            +++   +L P+VD  + D       ++    G     + +I+R GI + E A+ EL G  
Sbjct: 401  LVDELTSLSPVVDMKIADARGLDTSEIYLACGRGSRSTFQILRPGISVEELANNELPGYP 460

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
            + ++SL+    D    +++V F  E   L +++ D +EE     F ++T TL C   +Y+
Sbjct: 461  RYVFSLKDKNADDCVGYIIVVF--EGNTLVLSVGDAVEEVSNSFFNTETTTL-CAMLMYD 517

Query: 146  -QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG 204
               +Q+  G +R +        +EWK P    +   +AN  Q+L+A  GG ++Y EI + 
Sbjct: 518  DSFIQIHEGGIRHIIDNHV---SEWKPPTSKRIKCCSANTRQILIALSGGEVIYFEIDES 574

Query: 205  -ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL---PDLNLITKE 260
              L E+       +I+C+ I  +  +  YS   A+    ++ V++ SL     L  ++ +
Sbjct: 575  HALVEIFKRNFGVDITCMAIQAVPTDRVYSSFGAISGLDNV-VKLISLEKEKGLKQLSTQ 633

Query: 261  HLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKK 308
             L       SV +   + +             +L+  L  G ++   ++  TG L+D+  
Sbjct: 634  LLPNNATAESVCIAQIDSLVRDAGHMRRNSSLFLVVGLNTGVMIRSNIDAITGALSDQHS 693

Query: 309  VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
              LG + +        +     A SD+  + Y+   KL  S +N   V H+  F S+   
Sbjct: 694  RFLGARAVRFSLVKVGDGMGFMAMSDKSWLCYAHQGKLFTSYINYDMVEHVASFCSSHCS 753

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSI-PLGEHPRRI----------------------- 404
            D         L I    ++ +   +S+ PL   PR+I                       
Sbjct: 754  DGFVAISGNSLRIYRCLNLGQEFSQSVAPLTYTPRKISILPSLSPITDNGTETGVTKNRH 813

Query: 405  ----------CHQEQSRTFAICSLKN----QSCAEESEMHF-----------VRLLDDQT 439
                       + E +RT     L+N       AE+ E+             VR++D  T
Sbjct: 814  MLAIVECDHNTYDELTRTEIKKGLENIMPEGEQAEDVELGLYKAGEGKWGSCVRIIDPTT 873

Query: 440  FEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVG----TAYVLPEENEPTKGRILVFIVE 495
                +   LDT E   S  +C    D   Y C+     T + L   N  +    +     
Sbjct: 874  LSTAAKLLLDTDEAAISCCAC----DLEGYRCLAVGTVTGWNLANSNSNSCHIRMYAYGP 929

Query: 496  DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 555
            + ++  +   +  G   +L A+ G+LLA +   + LY       G R+L  +  + G ++
Sbjct: 930  NFEITFLHSTKVTGIPRALLAYEGRLLAGVGPDVILYAL-----GKRQLLKKAEYRGGVI 984

Query: 556  --------------------ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
                                 +++   G+ I VGD+ +SI++L +  +   +     D  
Sbjct: 985  DIQGYGVATPRTIGNGGLFGVMWLGASGNRIFVGDIRESITVLKFDEQMAKLSLICDDIR 1044

Query: 596  ANWMSAVEILDDDIYLGAENNFNLFTV-RKNSEGATDE-----ERGRLEVV--------- 640
              W++   +LD    +   + F+ F V R  SE +          G LE V         
Sbjct: 1045 PRWITGATVLDHHT-VALVDKFDTFAVCRVPSEASASNLSSALNSGSLEAVMPTILGVGN 1103

Query: 641  -----GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLF 694
                  ++HLG+        +L         G    V++ T+ G IG +I  +  ++   
Sbjct: 1104 KFEQEAQFHLGDLSTCIDKVTLCS-------GCTEAVVYATILGSIGALIPFISSDELDT 1156

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
            L+ L+  +      + G  H  +RS+    + V     +DGDL E F  L       I+ 
Sbjct: 1157 LQHLELLMANENPPLSGREHSIYRSYYGPVQHV-----IDGDLCEEFESLDSITQSRIAA 1211

Query: 755  TMNVSVEELCKRVEEL 770
             ++ +V E+ K++ ++
Sbjct: 1212 KIDKTVTEIIKKLRDI 1227


>gi|357496593|ref|XP_003618585.1| Splicing factor 3B subunit [Medicago truncatula]
 gi|355493600|gb|AES74803.1| Splicing factor 3B subunit [Medicago truncatula]
          Length = 702

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 173/699 (24%), Positives = 303/699 (43%), Gaps = 76/699 (10%)

Query: 117 NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
           ++ + ++E    GF   T +L       + L+QV    +R +        NEW++P   +
Sbjct: 30  SVRETVKEVTDNGFLDTTPSLSVSLIGDDSLMQVHPNGIRHIREDGH--INEWRTPGKRT 87

Query: 177 VNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQI 235
           +    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P+ E    S+ 
Sbjct: 88  IAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRF 147

Query: 236 AAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL-GDGHLLN 293
            AVG + D ++RI SL PD  + T   LG + +  +     F  +   +    G+G L  
Sbjct: 148 LAVGSY-DKTIRILSLDPDDCMQT---LGIQSLSSASESLLFLEVQASVGGEDGNGVLSR 203

Query: 294 FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 353
            +++M TG L+D +   LG +P  L     +    +   S RP + Y      L + ++ 
Sbjct: 204 TVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQGHFLLTPLSY 263

Query: 354 KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRT 412
           + +     F+S    + +       L I TI+ + +  +   IPL   P +   Q + + 
Sbjct: 264 ETLEFAASFSSDQCVEGVVALAGEALRIFTIERLGETFNETVIPLRYTPMKFVLQPKRKL 323

Query: 413 FAIC-SLKNQSCAEESEM---------------HF-------------VRLLDDQTFEFI 443
             +  S +    AEE E                H+             +R+LD +T    
Sbjct: 324 LVVIESDQGAFTAEEREANGGEDEDKDDPLSDEHYGYPKAESDKWASCIRILDPKTGNTT 383

Query: 444 STYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF-IVEDGK- 498
               L   E   S  + +F D +      VGTA  L        T G I ++  +EDG+ 
Sbjct: 384 CLLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSLTAGFIHIYRFLEDGRS 443

Query: 499 LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA-- 556
           L+L+ + + +G   +L+ F G+LLA I   ++ Y     D G R L  +  +   +    
Sbjct: 444 LELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFY-----DLGKRRLLRK--YENKLFPNT 496

Query: 557 -LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            + +QT  D I VGD  +S     Y+ +E  +   A D    W++A   +D D   G E 
Sbjct: 497 IVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDFDTMAGIEE 556

Query: 616 NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
           +     + K  +G  +    ++E + ++H+G+ ++  +  SL+        G    ++ G
Sbjct: 557 DPTGGRI-KWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLI-------PGGGECILNG 608

Query: 676 TVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLD 734
           TV G IG + A    +   F   L+ ++R+    + G +H  +RS          K+ +D
Sbjct: 609 TVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AYFPVKDVID 663

Query: 735 GDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 769
           GDL E F    +DL R   DE+ +T      E+ K++EE
Sbjct: 664 GDLCEQFPTLPMDLQRKIADELDRTRG----EILKKLEE 698


>gi|170580631|ref|XP_001895346.1| splicing factor 3B subunit 3 [Brugia malayi]
 gi|158597745|gb|EDP35799.1| splicing factor 3B subunit 3, putative [Brugia malayi]
          Length = 1181

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 176/782 (22%), Positives = 330/782 (42%), Gaps = 127/782 (16%)

Query: 87   GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFC----HDA 142
             +W+++ + DD FD+ +VVSF++ T +L++   + +EE    GF   T TL C     DA
Sbjct: 423  AVWTVKRNIDDKFDSHIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDA 480

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
            +  + V    G +  + S  R L N         +     N  QV +A  GG LVY E+ 
Sbjct: 481  LCIRTVFDILGLIGELMS-GRHLVN-------VQLLKCALNRRQVAIALAGGELVYFELD 532

Query: 203  -DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL------PDL 254
              G L E  +  +L  ++ C+ ++ I E    S+   VG+  D +VRI SL        L
Sbjct: 533  VTGQLNEYTERRELPADVLCMSLSEIPEGELRSRFLTVGL-ADKTVRIISLDPQDCLSPL 591

Query: 255  NLITKEHLGGEIIPRSVLLCAFEGIS-------YLLCALGDGHLLNFLLNMKTGELTDRK 307
             LI+         P S+++    G         +L   L +G LL   ++  TGELTD +
Sbjct: 592  QLISFSMQALPSEPESIIVLEMFGTETQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNR 651

Query: 308  KVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
               LGT+ + L     ++   + AAS R  ++Y    +   + ++   +     F+S   
Sbjct: 652  TRYLGTKSVKLFRVRIQSKDAIMAASSRAWLLYDYQSRFHLTPLSYAALEFAAGFSSEQC 711

Query: 368  PDSLAIAKEGELTIGTIDDIQKLHIRSI-PLGEHPRR-ICHQ------------------ 407
            P+ +    E  L I +++ +  +    + PL   PRR + H+                  
Sbjct: 712  PEGIVAIAENTLRILSLEKLGAVFNHVVHPLDYTPRRMVVHKASGNLIIIENDHAAFTVK 771

Query: 408  ---EQSRTFAICSLKNQSCAEESEMHFV-------------------------------R 433
               E+ +  A   ++    AEE++   V                               R
Sbjct: 772  GKMERRKQLADELMEVAKEAEEADQQAVKEMADAIRTEKVDERVYGSPKNQKGKWASTVR 831

Query: 434  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLP-EENEPTKGRILV 491
            ++     E +S +P    E   +I    F + S+  +  VG    L  +  +   G I  
Sbjct: 832  IMRSNDGETLSHFPFAEDEAAFAIAMVQFQNQSDTQFVLVGCGCDLQLKPRKANGGCIYT 891

Query: 492  FIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            F++      LQL+    T   V +++ F G  LA + +K++LY     D G R+L ++C 
Sbjct: 892  FLLAANGTTLQLLHRTPTDEVVNAIHDFRGMALAGVGKKVRLY-----DLGKRKLLAKCE 946

Query: 550  HHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
            +       + +++ G  IVV D  +S+  + YK ++G +     + +  +++ V +LD D
Sbjct: 947  NRQIPTQVVDIRSMGQRIVVSDSQESVHFMRYKKQDGQLSIFCDETSPRYVTCVCLLDYD 1006

Query: 609  IYLGAENNFNLFTVRKNSEGATDE------------ERG-------RLEVVGEYHLGEFV 649
              +   + F    V +  +G T+E            +RG       +LE +   ++G+ +
Sbjct: 1007 T-VAVGDRFGNVAVLRLPKGVTEEVQEDPTGVRALWDRGNLNGASQKLEAIAHLYIGDAI 1065

Query: 650  NRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKG 708
               +  SLV        G    + + T++G+IG++   +  +++ F + L+ ++R     
Sbjct: 1066 TSMQKTSLV-------PGANDCLSYTTISGIIGILVPFMSRDEFEFFQNLEMHMRVEYPP 1118

Query: 709  VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 768
            + G +H  +RS+    K+V     +DGDL E +  +   +   + + +     E+ K++E
Sbjct: 1119 LCGRDHLAYRSYYFPVKSV-----IDGDLCEQYSLMPLDKQKSVGEELGRKPTEIHKKLE 1173

Query: 769  EL 770
            ++
Sbjct: 1174 DI 1175


>gi|116191283|ref|XP_001221454.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
 gi|88181272|gb|EAQ88740.1| hypothetical protein CHGG_05359 [Chaetomium globosum CBS 148.51]
          Length = 979

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 181/789 (22%), Positives = 333/789 (42%), Gaps = 105/789 (13%)

Query: 14  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQG--QVVTCSGAYKDGSLRIVRNG 71
            + QP    S VE +E   ++ PI+   VV+L R+G    Q+ +  G+      RI+R+G
Sbjct: 173 FDPQPSGNLSLVETIE---SMNPILASGVVNL-REGDDAPQIYSACGSGTRSHFRILRHG 228

Query: 72  IGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
           + +NE  + EL G +  +W+ + ++ D  DT+++++  S T  L +++ +E+++    GF
Sbjct: 229 LEVNEIVASELPGTVSAVWTTKLTSQDKHDTYIILT--SSTDTLVLSIGEEVKQVSDSGF 286

Query: 131 CSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
            +   TL       + L QV    +R + S+ + +  EW +P   ++     N  QV +A
Sbjct: 287 LTSVSTLAIQQIGDDSLAQVHPKGIRHIRSSDQII--EWPAPQHRTIVATATNQRQVAVA 344

Query: 191 TGGGHLVYLEI--GDGILTEVK-HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVR 247
              G ++Y E+   DG L E     ++   ++CL +  + E    S   AVG   D ++R
Sbjct: 345 LSSGEIIYFELDDADGSLAEYDGREEMSGTVTCLSLGQVPEGRLRSSFLAVGC-DDRTIR 403

Query: 248 IFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR 306
           I SL P+  L ++               + + ++    AL    + + LL       T+ 
Sbjct: 404 ILSLDPESTLESR---------------SVQALTAAPSALAIIPMDDSLLGGSNSSDTNY 448

Query: 307 KKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS-NKKLLYSNVNLKEVSHMCPFNSA 365
           K   LG +P+ L   + K    V A S +  + +    +  L+  +   E + + P   A
Sbjct: 449 K--FLGVRPVRLFPVTVKQKPRVLALSSKAWLGHVDLARGFLFYTIE-SENNTLAPELRA 505

Query: 366 AFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SC 423
                        +  GT          + P GE P  +        F     + +  SC
Sbjct: 506 QL-----------VAAGT----------TAPGGEKPDHVAEILPPEQFGYPRGQGRWASC 544

Query: 424 AEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFS---DDSNVYYCVGTAYVLPE 480
                   + ++D      I T  L   E   S+   SF+   D+S +    G   VL  
Sbjct: 545 --------ISIVDPIGETVIRTIHLQENEAAASLAIASFTSQDDESFLVVSTGRDMVL-N 595

Query: 481 ENEPTKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
             + + G   V+   +DG+ L+LI +  T     +L AF G+L+A I + + +Y   L+ 
Sbjct: 596 PRQLSGGYSYVYRFHDDGRDLELIHKTGTTEPPTALEAFRGRLVAGIGKTLVVYDLGLK- 654

Query: 539 DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
              R+ Q+     G I++L  QT+G+ IVVGD+   ++++ Y+ E   +     D  A W
Sbjct: 655 QMLRKTQANDVVPGLIVSL--QTQGNRIVVGDVQHGVAMVAYRTESNQLIPFVDDTIARW 712

Query: 599 MSAVEILDDDIYLGAENNFNLFTVRKNSEGATD-EERG----------------RLEVVG 641
            +   ++D D   G +   N + VR   + + + +E G                RL++  
Sbjct: 713 TTCTTMVDYDSVAGGDKFGNFWIVRTPQQASLEADEPGAHRLLHAREHLHGAPHRLQLTA 772

Query: 642 EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQT 700
            +H  +         LV       VG    +++    G +GV +  +  E   F   L+ 
Sbjct: 773 HFHTQDIPTGITKTHLV-------VGGQEVLVWSGFQGTVGVFVPFVTREDADFFLALEQ 825

Query: 701 NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSV 760
           ++R     + G +H  +R +        AK  +DGDL E +  L   +   I+  ++ SV
Sbjct: 826 HMRGEEPSLIGRDHLAYRGYYEP-----AKGVVDGDLCERYQLLPGDKKQRIAAELDRSV 880

Query: 761 EELCKRVEE 769
            E+ +++ +
Sbjct: 881 REVERKISK 889


>gi|428180132|gb|EKX49000.1| hypothetical protein GUITHDRAFT_105085 [Guillardia theta CCMP2712]
          Length = 1207

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 190/842 (22%), Positives = 351/842 (41%), Gaps = 121/842 (14%)

Query: 24   YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            Y  V+E   +L PIV   V+DL  +G  QV T  G     S+R++R+G+ + E A  +L 
Sbjct: 394  YFRVVEEIESLSPIVGMKVMDLYSEGNFQVFTLCGKGPRSSIRVLRHGLSVVEMAISQLP 453

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFI-SETRILAMNLEDELEETEIEGFCSQTQTLF--- 138
             +   +W+L++++ DP D ++VVS   S  + L +++ + +E     G     +++    
Sbjct: 454  TVPVAVWTLKANSTDPHDRYIVVSLAHSSVQTLVLSIGETVEAVANHGLLPHAKSISIAT 513

Query: 139  ---CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
               C   ++   +QV  G   + S  +        +P   SVN    N  Q+L+    G 
Sbjct: 514  MGDCMIQVHTNGIQVMKGGKNIPSPFAS------SNPVILSVN----NEQQMLVTQTDGV 563

Query: 196  LVYLEI-GDGILTEVKHAQLEY-EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD 253
              YLE+ G G L E     +   E+  +++ P+  + +  + A +G + D +     +  
Sbjct: 564  TSYLEMEGTGTLREKGKININAQEVCAVEVTPLSASQTLGKFAIMGAFMD-NAWFLCVVS 622

Query: 254  LNLITKEHLGGEII----PRSV-LLCAF--------EGISYLLCALGDGHLLNFLLNMKT 300
            L+  +   + G  +    P S+ LL ++          + +L   L +G L+    N +T
Sbjct: 623  LDASSFSSVVGRQVLQARPSSIALLQSYSRSSREPGRSVFFLYVGLENGVLMRMSFNAET 682

Query: 301  GELTDRKKV-SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
            GE++   +  SLG+ P+ L     +    + A S R  + Y    K     ++   +   
Sbjct: 683  GEISQEFRTRSLGSNPVKLVRVKVQEKEALLALSSRSWLAYHHQGKQCLDPLSYDMLDFA 742

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIP-LGEHPRRICHQEQSRTFAICSL 418
              F+S   P+      +G L I +++ + ++  ++   L   PR+    + +    +   
Sbjct: 743  WNFSSQQCPEGFVCISQGSLRILSLERVGEIFSQATAKLAHTPRQCAPIKGTTMMMVIES 802

Query: 419  KNQSCAEESEMHFVRLLD----DQTFEFIS--TYPLDTFEYGC-----------SILS-- 459
             + + A ++       +D    D   + +S   + +     GC           S++S  
Sbjct: 803  DHNTDANKALQDGANKVDMEGQDGEADKLSYEMFGVQRAGNGCWASSLRVIDMDSLVSRQ 862

Query: 460  -CSFSDD-SNVYYC------------VGTAYVLPE-ENEPTKGRILVFIVEDGKLQLIAE 504
              ++SDD + +  C            VGT+  L   E   + G +  + V    L L  +
Sbjct: 863  IINYSDDEAALSLCSSVGANGEHLVLVGTSVGLRMGEKHASSGFVYTYSVSGSHLHLEHK 922

Query: 505  KETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQ 560
                G   ++  + G++L  +   +++Y    K +LR   +R+  +        L   + 
Sbjct: 923  TPMDGIPRAICNYQGRVLVGVGSALRMYEIGKKKLLRKCESRKFPN--------LICSIH 974

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
            T+GD I VGD  +S SLL +     + E  A D  A W++A   LD D   GA+   NLF
Sbjct: 975  TQGDRIFVGDSAESFSLLRFNSLSNSFELFAEDARARWLTASCPLDFDTVAGADKFGNLF 1034

Query: 621  TVR-----------KNSEGATDE--ERG---RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
              R           +     TD    RG   +L+ V   ++GE V   +  +LV      
Sbjct: 1035 ICRIPEEAASELEEEGEAVQTDSVLHRGAKHKLDEVAHQYVGEAVLGLQRSALVQ----- 1089

Query: 665  DVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
              G    VI+GT+ G +G +   +  E   F  +L+  LR  +     +N    +SF+N 
Sbjct: 1090 --GGTEAVIYGTILGGLGALQPFVSKEDVDFFLRLEMLLRGNLGVRESVND---KSFDNP 1144

Query: 724  KKT-----------VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL-T 771
                             +  +DGDL E+F  L   R  +++  +  + EE+ K++E++ T
Sbjct: 1145 SLCGNDQLGFRSYFAPMRGVVDGDLCETFHTLDSGRQHKVAAELGKTPEEVAKKIEDMRT 1204

Query: 772  RL 773
            RL
Sbjct: 1205 RL 1206


>gi|432863837|ref|XP_004070177.1| PREDICTED: splicing factor 3B subunit 3-like [Oryzias latipes]
          Length = 1146

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 145/621 (23%), Positives = 264/621 (42%), Gaps = 98/621 (15%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   N+ PI+   + DL  +   Q+    G    
Sbjct: 384 TFFFQPRPLKNLVL-----------VDEQENMSPIMSCQIADLANEDTPQLYVACGRGPK 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVRCA 548

Query: 182 ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVG 608

Query: 240 MWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGIS--------------YL 282
           +  D +VRI SL     L  ++ + L  +  P S+ +    G+               YL
Sbjct: 609 L-VDNTVRIISLDPSDCLQPLSMQALPAQ--PESLCIVEMGGVEKQDELGEKGTMGFLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS 
Sbjct: 666 NIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSY 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + + +   F S   P+ +       L I  ++ +  +  + + PL   P
Sbjct: 726 QSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTP 785

Query: 402 RR-ICHQE-----------QSRTFAICSLKNQSCAEE-------------SEM------- 429
           R+ + H E            + T A  + + Q  AEE             +EM       
Sbjct: 786 RKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNE 845

Query: 430 ------------------HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC 471
                               VRL++      +    L+  E   S+  C F +  + +Y 
Sbjct: 846 NLPESIFGAPKAGAGQWASLVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFLNTGDDWYV 905

Query: 472 -VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
            VG A  ++      + G I  + +  G  KL+ + +   +    ++  F G++L  + +
Sbjct: 906 LVGVARDMILNPRSVSGGFIYTYRLTGGGEKLEFVHKTPVEDVPLAIAPFQGRVLIGVGK 965

Query: 528 KIQLYKWMLRDDGTRELQSEC 548
            +++Y     D G ++L  +C
Sbjct: 966 LLRIY-----DLGKKKLLRKC 981



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 13/136 (9%)

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLF 694
            + EVV  YH+GE V   +  +L+        G   ++++ T++G IG++     HE + F
Sbjct: 1017 KAEVVVNYHVGETVLSLQKTTLI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDF 1069

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
             + L+ ++R     + G +H  +RS+         KN +DGDL E F  +   +   +++
Sbjct: 1070 FQHLEMHMRSEFPPICGRDHLSFRSY-----YFPVKNVIDGDLCEQFNSMDTHKQKSVAE 1124

Query: 755  TMNVSVEELCKRVEEL 770
             ++ +  E+ K++E++
Sbjct: 1125 ELDRTPPEVSKKLEDI 1140


>gi|443896643|dbj|GAC73987.1| predicted DNA methylase [Pseudozyma antarctica T-34]
          Length = 1285

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 177/812 (21%), Positives = 343/812 (42%), Gaps = 91/812 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSL 91
            +L PI+D   ++       Q+    G     S +++R+G+   E  S +L G+   +W+ 
Sbjct: 484  SLDPILDATPLNPLASDSPQIFAACGRGARSSFKMLRHGLEALEAVSSDLPGVPSAVWTT 543

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
            + +  D +D+++V+SF++ T +L++   + +EE    G  + + TL       + L+QV 
Sbjct: 544  KITRRDEYDSYIVLSFVNGTLLLSIG--ETIEEVSDSGLLTSSSTLAVQQLGEDALLQVH 601

Query: 152  SGSVRLVSSTSRELRNEWKSP--PG--YSVNVAT-ANASQVLLATGGGHLVYLEIG-DGI 205
               +R +    +++ NEW +P  P    +  VAT  N  QV++A     LVY E+  DG 
Sbjct: 602  PHGIRHIL-VDKQI-NEWVTPSLPNGRQTTIVATCTNERQVVVALSSNELVYFELDMDGQ 659

Query: 206  LTEVKHAQ-LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E +  + +   +  + +    E    +   AVG   D +VRI SL   + +    +  
Sbjct: 660  LNEYQERKAMGAPVLTMSMPECPEGRQRTAYLAVGCG-DSTVRIVSLEPSSTLASISIQA 718

Query: 265  EIIPRSVLLCA---------FEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
               P S +  A             +++   L +G LL  +L+  TG+LTD +   LG++ 
Sbjct: 719  LTAPASSICMAEMHDSTVDRHHATTFVNIGLQNGVLLRTVLDGVTGQLTDTRTRFLGSKA 778

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            + L        T V A S R  + ++   ++ ++ +    + H   F++   PD L    
Sbjct: 779  VRLVRTRVHGQTAVMALSTRTWLSFTYQSRVQFTPLIFDALDHAWSFSAELCPDGLIGIV 838

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVR 433
               L I TI  +  KL   S+ L   PRR+  H +    F +    +++ +  ++   V 
Sbjct: 839  GSTLRIFTIASLASKLKQDSVALSYTPRRMASHPDGQGLFYVAEADHRTLSPGAQRRRVE 898

Query: 434  LLDDQTFEF-ISTYPLDTFEYGC------SILSCSFS--------------DDSNVYYCV 472
             LD +          LD  E+G       +  SC                 DD+   + +
Sbjct: 899  ALDKELKPHQRGVLDLDPAEFGSIRAEAGNWASCVRVVDGVNAQTTHRIELDDNEAAFSI 958

Query: 473  GTAYVLPEENE--------------P---TKGRILVFIVEDG--KLQLIAEKETKGAVYS 513
                    + +              P    K  +  + + +G  +L+++ + E       
Sbjct: 959  AVVPFASADKQLFVVVGSAVEVVMSPRSFKKAYLTTYRLGNGGRELEVVHKTEVDDVPLV 1018

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLM 572
            L AF G+LLA + + +++Y+      G ++L  +C +     A+  +  +G  IVVGD+ 
Sbjct: 1019 LRAFQGRLLAGVGKVLRIYEL-----GKKKLLRKCENRSFPTAIVALDAQGSRIVVGDMQ 1073

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSEGAT 630
            +S+    YK  E  +   A D    +++   +LD D    A+   N++ VR   ++  + 
Sbjct: 1074 ESVIFASYKPLENRLVTFADDIMPRYVTRCTMLDYDTVAAADKFGNVYVVRIDADTSRSV 1133

Query: 631  DEERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----TVIFGTVNG 679
            DE+   +        ++G  H    +  +  G ++  L  S    +P     +++  ++G
Sbjct: 1134 DEDVTGMTTMHEKPLLMGAAHKATLLAHYFVGDIITSL--SRAVMVPGGREVLLYTGISG 1191

Query: 680  VIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             IG +   +  E    +  L+  LR+    + G +H  +RS          K+ +DGDL 
Sbjct: 1192 TIGALVPFVSKEDVDTMTTLEMQLRQQSDSLVGRDHLAYRS-----SYAPVKHVIDGDLC 1246

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            ESF  L   +   +++ ++    E+ K++ +L
Sbjct: 1247 ESFGLLPPAKQSAVAQELDRKPSEVNKKLAQL 1278


>gi|452986188|gb|EME85944.1| hypothetical protein MYCFIDRAFT_59215 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1223

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 189/840 (22%), Positives = 353/840 (42%), Gaps = 111/840 (13%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P++L   +L  D  G           L P++   V +L  +   Q+    G      
Sbjct: 415  YFQPRELTMTHLAVDVPG-----------LHPLMRTKVDNLTGEDAPQIYGIQGTGNKSL 463

Query: 65   LRIVRNGIGI-----NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 119
             + +R+G+ +     N   +V   GI   W+ +  + D    +L++S       +A ++ 
Sbjct: 464  FKTIRHGLDVEIMIDNNMGNVPYDGI---WTFKHRSSDEHHKYLIISSSYGDLTVACSIG 520

Query: 120  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 179
            D +E+ E   F     T+       + LVQV +  +R +  T     NEW +PP  +V  
Sbjct: 521  DSVEQIENSPFLENRATVHAQQMGDSTLVQVHARGIRSILETG--AFNEWPTPPHRTVAA 578

Query: 180  ATANASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAA 237
            A+AN  Q+LLA     L +  +G DGIL +++   ++  +I+ + +    +    ++ A 
Sbjct: 579  ASANERQLLLALSSAELAFFFMGEDGILIQLEEMPEMSGKITAISVGQTPKGRQQAKYAV 638

Query: 238  VGMWTDISVRIFSLP-DLNLITKEHLGGEIIPRSV----LLCAFEGISYLLCALG--DGH 290
            VG   D ++R+ S+  D  L  +       +P S+    +L    G +  +  +G   G 
Sbjct: 639  VGC-EDCTIRVLSIELDSPLEARSVQALSAVPTSLEVVEMLDPASGTTVNVVHIGLRSGL 697

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
             L  +++  TGEL D +   LGT+P  L          V A S RP + Y+  +  LY+ 
Sbjct: 698  YLRAIIDETTGELGDVRTKFLGTKPPRLCPVEVDGEDCVLACSSRPWLGYNHPQSKLYTV 757

Query: 351  VNL--KEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRICHQ 407
              L  + +     F+S       AI +   L I +I  I+ +L   S+ L   PR +   
Sbjct: 758  TPLIAEPMEAARSFSSPELKGLCAI-QGSSLLIFSIPSIEGRLSHSSVSLQYTPRSMTRN 816

Query: 408  EQSRTFAICSLKNQ--SCAEESEMHFVRLLDDQTFEFISTY------------------P 447
                 + +   +    S A   ++    + DD   + +  +                  P
Sbjct: 817  PWYPLWYVAQSEGNTLSQATRDQLRGKSIGDDDEAKAMERHLGLPRGNGHWASCIQAVDP 876

Query: 448  LDTFEYGCSI--------LSCSF----SDDSNVYYCVGTA-YVLPEENEPTKGRILVF-I 493
            +   E  C+I        LSC+     S +  VY  VGT  ++ P     T G + ++ +
Sbjct: 877  IGGREVTCTIELGENEAALSCACVAFESKNWEVYLAVGTGQHMQPGTGVQTAGYVHIYKL 936

Query: 494  VEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH-- 550
            ++DG +L+ + + + +  VY+L  F G+L   +  ++ +Y     D G + L  +  +  
Sbjct: 937  LKDGAELEFVHKTKFELPVYALMPFRGRLALGVGNELFIY-----DMGMKALLRKARNIA 991

Query: 551  -HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                I++L  +++G+ I+ GD+ + ++ L+YK     +     D    W +   ++D + 
Sbjct: 992  VPNQIVSL--ESQGNRIICGDVSEGVTYLVYKPTFNRLIPFVDDTVQRWTTTTTMVDYET 1049

Query: 610  YLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNR 651
              G +   NL+ VR   + S+ A +E  G               RL++   Y   +    
Sbjct: 1050 AAGGDKFGNLWIVRCPEQPSQEADEEGAGGYIMNERSYLNGAPYRLDLRAHYFCQDIPMS 1109

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVG 710
             +  +LV        G    + +  + G +G+ I  +  E   F   L+  +R     + 
Sbjct: 1110 MQRTALV-------AGGQEVLFWSGLQGTLGILIPFVTREDVEFFTALEQQMRTEDPPLA 1162

Query: 711  GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            G +H  +RS+      V  K  +DGDL+E F+ LS     +I+  ++ SV+E+ K+V+E+
Sbjct: 1163 GRDHLMYRSY-----YVPVKGVIDGDLLERFMGLSYDTKQKIAAEVDRSVKEIEKKVQEM 1217


>gi|357111224|ref|XP_003557414.1| PREDICTED: DNA damage-binding protein 1-like [Brachypodium
           distachyon]
          Length = 1356

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 74/464 (15%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
           N+GPI+D  + D   + Q Q+ +CSG   +GSLR++RNGI + +    E   QG+ G+W+
Sbjct: 478 NVGPILDLAIADYHGEKQDQMFSCSGMCPEGSLRVIRNGINVEKLLRTEPIYQGVTGLWT 537

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF     TL C       LVQ+
Sbjct: 538 LRMKRTDMYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPDVCTLACGLIADGVLVQI 596

Query: 151 TSGSVRLVSSTSRELRN--EWKSP------PGYSVNVATANASQVLLATGGGHLVYLEIG 202
            S  V+L   T+          SP      P  +++V     + V +AT     +Y+   
Sbjct: 597 HSKGVKLCLPTAYAHPEGAPLTSPVCVDWYPDVTISVGAVGHNIVAVATSNPCCLYILSV 656

Query: 203 DGI------LTEVKHAQLEYEISCLDI-------NPIGENPSYSQIAAVGMWTDISVRIF 249
             +      L E++H QL YE+SC+ I       +P+    ++ +     +   + VR+F
Sbjct: 657 RPLSSFQYELYEIQHVQLRYEVSCISIPEEDSRRSPVAVRRAFGRGKRNNLPAKVDVRMF 716

Query: 250 SL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGISYLLC 284
           ++     P + +I+ E                   G  +   IP SV   A E   Y+L 
Sbjct: 717 AVIGTHKPSVEVISLEPGEAFMLLSIGSISVNNSFGAPVSGRIPESVRFVASERF-YILA 775

Query: 285 ALGDGHLLNFLLNMKTGE---LTDR--KKVS---------------LGTQPITLRTFSSK 324
            L +G LL F    +T E   L D   K+ S               +G  P+ L   S  
Sbjct: 776 GLRNGMLLRF--ESETSEEHYLPDSFYKESSTHSVNTLLQLIAMRHIGITPVGLVPLSDS 833

Query: 325 NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTI 384
             + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E  L +  +
Sbjct: 834 ANSDIILLSDRSWLLHASRHSLAYSSISFLPASHVTPVSSMDCPSGLLFVAENCLHLVEM 893

Query: 385 DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 426
              ++L+ + + +   PR++ +   SRT  +    L   SC+ +
Sbjct: 894 VHGKRLNAQKLSIEGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 937


>gi|414883930|tpg|DAA59944.1| TPA: hypothetical protein ZEAMMB73_987949 [Zea mays]
          Length = 1355

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 225/537 (41%), Gaps = 85/537 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
            N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG+ ++     E   QG+ G+W+
Sbjct: 478  NVAPILDLAIADYHGEKQDQMFACCGMSPEGSLRVLRNGVNVDRLLKTEAIYQGVTGLWT 537

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            LR    D + +FLV+SF+ ETRIL++ L    + ++  GF     TL C     N LVQ+
Sbjct: 538  LRMKATDAYHSFLVLSFVEETRILSVGLSFN-DISDAVGFQPDVCTLACGLVADNLLVQI 596

Query: 151  TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
             S  V++   T          +  +  +W   P  +++V     + V++AT     +Y+ 
Sbjct: 597  YSKGVKVCLPTVYAHPEGAPLTSPICTDWY--PAITISVGAVGHNIVVVATSNPCCLYVL 654

Query: 201  IGDGI---------LTEVKHAQLEYEISCLDI---NPIGENPSYS--------------- 233
               G+         L    H QL+YE+SC+ I   + I +N S+S               
Sbjct: 655  ---GVRSSSSYQYELYATHHVQLQYEVSCISIPQEDCIHDNVSFSCGEGDDICKNPPPKV 711

Query: 234  ---QIAAVGMWTDISVRIFSLPD---LNLIT------KEHLGGEI---IPRSVLLCAFEG 278
               + A +G     SV I SL     L ++T         LG  +   IP +V   A E 
Sbjct: 712  NVCKFAVIGTHRP-SVEIISLEPGEALRVLTIGTVSVNNALGAPMSGCIPENVRFVAAER 770

Query: 279  ISYLLCALGDGHLLNFLLNMK---TGELTDRKKVS-------------LGTQPITLRTFS 322
              Y+L  L +G LL F    +    G L     +              +G  P+ L    
Sbjct: 771  F-YILAGLRNGMLLRFESETRDYLPGFLYKDSSIPSVNTFLQLISIRRIGITPVLLVPIH 829

Query: 323  SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 382
                  +   SDRP +++++   L YS+++    SH+ P +S   P+ L    E  L + 
Sbjct: 830  DSANADIIVLSDRPWLLHAARHSLAYSSISFLSASHVTPVSSVDCPNGLLFVAESCLHLV 889

Query: 383  TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 442
             +   ++L+ +   +G  PR++ +  +SRT  +        +  S+   V  +D Q    
Sbjct: 890  ELVHGKRLNAQKFSIGGTPRKVLYHNESRTLLVLRTGLNGASSSSD---VVQVDPQNGVL 946

Query: 443  ISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEPTKGRILVFIVE 495
            +S Y  +  E    +      +D           G   +   E E  KGR++V  +E
Sbjct: 947  LSRYKCEPGETAKCMQIAKIGNDQVLIVGTTKSAGRPMMSNGEAESIKGRLIVLSLE 1003


>gi|451852814|gb|EMD66108.1| hypothetical protein COCSADRAFT_34693 [Cochliobolus sativus ND90Pr]
          Length = 1235

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 188/821 (22%), Positives = 336/821 (40%), Gaps = 109/821 (13%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 85
             +E   +L PI+D  V +   +   Q+ T +G     S R  RN + + +     L Q  
Sbjct: 404  AVEAMPSLNPIMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNA 463

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +++D  DT +V+     +R L + + D++EE    GF   T TL       +
Sbjct: 464  SDVWTTKLTSEDETDTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGED 521

Query: 146  QLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
             ++Q+    +R +         +S +     +W+ P   ++     N  QV +A   G +
Sbjct: 522  CIIQIHPKGIRHIQGIQFPNDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQI 581

Query: 197  VYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            +Y E   DG L   +    LE  I+CL +  + E    +   AVG  +D +VRI++L PD
Sbjct: 582  LYFECDSDGSLAMAEEEIVLESTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIYNLSPD 640

Query: 254  L--NLITKEHLGGEIIPRSVLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELT 304
            +  N++    +     P S L        +  G S +L   L  G  +  +L+  TG++ 
Sbjct: 641  MEGNILRSISVQALTSPPSDLTINLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIG 700

Query: 305  DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPF 362
            D ++  LG +PI     +      + A + RP + Y+  +   L  + +N         F
Sbjct: 701  DTRRRFLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNF 760

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKN 420
            + + F   + ++   EL I T +D+       SIPL   PR++  + +Q   + I S  N
Sbjct: 761  DGSQFKGIICVSAN-ELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNN 819

Query: 421  ------------QSCAEESEMHFVRLLDDQTFEFIST--YPLDTFEY------------- 453
                        QSC ++ +     +  +Q+     +  +P   F Y             
Sbjct: 820  TISADRRQQLIAQSCGKKEDGTNGSMETEQSNGAADSDEFPAVDFGYPRAQGSWASCIQV 879

Query: 454  -----------------GCSILSCSF----SDDSNVYYCVGTAYVL---PEENEPTKGRI 489
                               S++S +     S +   +  VGTA  L   P +      +I
Sbjct: 880  VDPVTEKTVTHTVELNGNISLVSAALVFFESRNDEAFLAVGTAKDLSFTPYKFSSASIQI 939

Query: 490  LVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
                    +L+   E        +L AF GKLLA + + + LY   ++    R+ Q+   
Sbjct: 940  YKINPTGRELEFFHETTVSDPPLALLAFKGKLLAGVGRHLCLYDCGMK-SVLRKAQAPNC 998

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDD 607
                I  L  +T+G  +VV D  +S++ +++K +     +     D  A   +A E+LD 
Sbjct: 999  VPTRITGL--KTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTIARHTTASEMLDY 1056

Query: 608  DIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            D  +G +   N++ VR   K SE + +   G   +V + +LG   NR     L+     +
Sbjct: 1057 DTTVGGDKFGNIWLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTN 1113

Query: 665  DV-----------GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGL 712
            D+           G    V +  + G +G +        +   ++L+  LR   K + G 
Sbjct: 1114 DIPVSIQKTVLLSGGERVVFWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLSGR 1173

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
            +H  +RS+    K+V     +DGDLIE FL L R + + I+
Sbjct: 1174 DHLAFRSYFAPVKSV-----IDGDLIERFLVLPRDKRESIA 1209


>gi|323454388|gb|EGB10258.1| hypothetical protein AURANDRAFT_23619 [Aureococcus anophagefferens]
          Length = 1212

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 177/376 (47%), Gaps = 16/376 (4%)

Query: 37  IVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSST 95
           I D    DL  +   QV    G     SLR++R+G+ ++E A  EL G    +W++R   
Sbjct: 415 ITDVYCGDLAGEEAPQVYALCGKGHRSSLRVLRHGVAVSEMAVSELPGRPSAVWTVRGRH 474

Query: 96  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 155
           D+P+D ++VVSF + T +L++   + +EE    GF +   TL       N L+QV    +
Sbjct: 475 DEPYDKYIVVSFTNATLVLSIG--ETVEEVTDSGFLATAPTLDVALLADNALLQVHGEGI 532

Query: 156 RLVSSTSRELR-NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVKHAQ 213
           R V     +LR +EWK+P   ++  A AN  QV  A  GG ++Y E+   G L E+   +
Sbjct: 533 RHVRG---DLRISEWKTPGRKAIEKAAANERQVAAALAGGEVIYFELDASGALAELGTKE 589

Query: 214 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRS 270
           L  E++CLD+  +    + +   A+G W D S+R+ SL PD  L  +    LG      S
Sbjct: 590 LGVEVACLDVGVVPAGRARAPFLALGGW-DGSLRLLSLAPDELLVQVATMQLGARA--ES 646

Query: 271 VLLC-AFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 329
           V  C   +G   +   L +G L    ++  TG+L D +   LG++ + L          +
Sbjct: 647 VRFCETPDGRLGVAAGLANGVLQRAAVDASTGQLGDARARFLGSRAVRLFRVDVGGAPGL 706

Query: 330 FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-Q 388
            A S R  + Y+   +L  + ++   + H   F S   P+ +       L I   D + +
Sbjct: 707 LALSSRAWLCYAHAGRLETAPLSYDALEHAAGFKSEQCPEGVVAIAGSTLRIFVPDKLGE 766

Query: 389 KLHIRSIPLGEHPRRI 404
             +  ++PL   PRR+
Sbjct: 767 TFNQSALPLRYTPRRL 782


>gi|328717412|ref|XP_003246201.1| PREDICTED: splicing factor 3B subunit 3-like [Acyrthosiphon pisum]
          Length = 1218

 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 203/448 (45%), Gaps = 40/448 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+QL  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRQLRNLVL-----------VDEMDSLSPIMACQVADLAAEDTPQLYMACGRGSR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ FD +++VSF + T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGSPNAVWTVKRRADENFDAYIIVSFSNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + +VQ+    VR + S  R   ++WK+P    +    
Sbjct: 491 VEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSDKR--MHDWKAPEKKKIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTEVK-HAQLEYEISCLDINPIGENPSYSQIAAVG 239
           AN  QV++A GGG LVY E+   G L E K   ++  ++ C+ +         S+  AVG
Sbjct: 549 ANQRQVVIALGGGELVYFEMDPTGHLNEHKDRKEMNSDVLCMALANAPSGEQMSRFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFE-----------------GISY 281
           + TD +VRI SL   + + +  +     +P S  LC  E                  + Y
Sbjct: 609 L-TDETVRIISLDTTDCLVQLKMQAIPAMPES--LCIVEMGASDGGSSDEPAMNSLSMLY 665

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           L   L +G LL  +L+  TGE+ D +   LG +P+ L    ++    V A S R  + Y 
Sbjct: 666 LNIGLQNGVLLRTVLDGVTGEMADTRARYLGGKPVKLFKIRTRGNEAVLAMSSRSWLSYY 725

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
              +   + ++ + + +   F+S   P+ +       L I  ++ +  +  + S P+   
Sbjct: 726 YQNRFHLTPLSYESLEYASGFSSEQCPEGIVAISGNTLRILALEKLGAVFNQVSFPVEYT 785

Query: 401 PRRICHQEQSRTFAICSLKNQSCAEESE 428
           PR+      S    +   ++ +  E+++
Sbjct: 786 PRKFVIHPDSAHLIVVETEHNAYTEQTK 813



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 39/293 (13%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILAL 557
            L+L+ +        ++  F G+++  I + ++LY     D G ++L  +C +    +L +
Sbjct: 938  LELVHKTTVDNVPTAICGFQGRVIIGIGRILRLY-----DIGKKKLLRKCENKQIPLLIM 992

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNF 617
             ++  G  I V D+ +S+ ++ YK  E  +   A D    +++A+EILD +    A+   
Sbjct: 993  GIRVMGCRIYVSDVQESVYMVRYKRNENQLIIFADDTQPRYITAMEILDYNTVATADKCG 1052

Query: 618  NLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLV 658
            N+  VR  S   +DE            +RG L       + +  +H+GE     +  +L+
Sbjct: 1053 NISVVRLAS-SISDEVDDDPTGNKSLWDRGLLNGASQKADFIVNFHIGEICTSIQKATLI 1111

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                    G   ++++ TV G IGV+     HE+  F + L+ ++R     + G +H  +
Sbjct: 1112 -------PGGSESLVYATVTGTIGVLVPFTAHEEQDFFQHLEMHMRSENPPLCGRDHLSY 1164

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            RS+         KN  DGDL E +  +   +   I+  ++ +  E+ KR+E++
Sbjct: 1165 RSY-----YFPVKNVCDGDLCEQYNSIDIAKQKSIAADLDKTPAEVSKRLEDI 1212


>gi|124359136|gb|ABD32504.2| CPSF A subunit, C-terminal; WD40-like [Medicago truncatula]
          Length = 632

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 161/647 (24%), Positives = 279/647 (43%), Gaps = 80/647 (12%)

Query: 167 NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINP 225
           NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+  ++  +++CLDI P
Sbjct: 18  NEWRTPGKRTIAKVGSNRLQVVIALNGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAP 77

Query: 226 IGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLC 284
           + E    S+  AVG + D ++RI SL PD  + T   LG + +  +     F  +     
Sbjct: 78  VPEGRQRSRFLAVGSY-DKTIRILSLDPDDCMQT---LGIQSLSSASESLLFLEVQ---- 129

Query: 285 ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 344
              +G L   +++M TG L+D +   LG +P  L     +    +   S RP + Y    
Sbjct: 130 -ASNGVLSRTVVDMVTGLLSDSRSPFLGLRPPKLFPIVVRGKRAMLCLSSRPWLGYIHQG 188

Query: 345 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRR 403
             L + ++ + +     F+S    + +       L I TI+ + +  +   IPL   P +
Sbjct: 189 HFLLTPLSYETLEFAASFSSDQCVEGVVALAGEALRIFTIERLGETFNETVIPLRYTPMK 248

Query: 404 ICHQEQSRTFAIC-SLKNQSCAEESEM--------------HF-------------VRLL 435
              Q + +   +  S +    AEE E               H+             +R+L
Sbjct: 249 FVLQPKRKLLVVIESDQGAFTAEEREAAKKDEDKDDPLSDEHYGYPKAESDKWASCIRIL 308

Query: 436 DDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL--PEENEPTKGRILVF 492
           D +T        L   E   S  + +F D +      VGTA  L        T G I ++
Sbjct: 309 DPKTGNTTCLLELQDNEAAFSGCTVNFHDKEYGTLLDVGTAKGLQFTPRRSLTAGFIHIY 368

Query: 493 -IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
             +EDG+ L+L+ + + +G   +L+ F G+LLA I   ++ Y     D G R L  +  +
Sbjct: 369 RFLEDGRSLELLHKTQVEGVPLALSQFQGRLLAGIGPVLRFY-----DLGKRRLLRK--Y 421

Query: 551 HGHILA---LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
              +     + +QT  D I VGD  +S     Y+ +E  +   A D    W++A   +D 
Sbjct: 422 ENKLFPNTIVSIQTYRDRIYVGDTQESFHYCKYRWDENQLYIFADDCVPRWLTASYHIDF 481

Query: 608 DIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
           D          +    K  +G  +    ++E + ++H+G+ ++  +  SL+        G
Sbjct: 482 DTMAEDPTGGRI----KWEQGKLNGAPNKVEEIVQFHVGDVISCLQKASLI-------PG 530

Query: 668 QIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 726
               ++ GTV G IG + A    +   F   L+ ++R+    + G +H  +RS       
Sbjct: 531 GGECILNGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQDNPPLCGRDHMAYRS-----AY 585

Query: 727 VDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 769
              K+ +DGDL E F    +DL R   DE+ +T      E+ K++EE
Sbjct: 586 FPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTRG----EILKKLEE 628


>gi|340367933|ref|XP_003382507.1| PREDICTED: splicing factor 3B subunit 3-like isoform 1 [Amphimedon
           queenslandica]
          Length = 1214

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 202/444 (45%), Gaps = 32/444 (7%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L        V+ +E   +L PI+   + DL  +   Q+    G    
Sbjct: 383 TFFFGPRPLKNLIL--------VDEME---SLSPIMSCQIADLANEDTPQLYAACGRGPR 431

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            SLR++R+G+ + E A  EL G    +W+++  + + FD+++VVSF++ T IL++   + 
Sbjct: 432 SSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVSFMNATLILSIG--ET 489

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + L+Q+    +R + S  R   NEW+SP    +    
Sbjct: 490 VEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKRV--NEWRSPGKRLIRQCA 547

Query: 182 ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG +VY E+   G L E  +  ++  E+ C+ +  +       +  AVG
Sbjct: 548 VNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLGSVPPGQQRCRFLAVG 607

Query: 240 MWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEG-------IS----YLLCALG 287
           + +D +VRI SL P   L          +P S+ +    G       +S    +L   L 
Sbjct: 608 L-SDQTVRIISLDPHDTLQPLSMQALPALPESLCIVNMSGNVSDDTTVSTGGLFLNIGLQ 666

Query: 288 DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLL 347
           +G LL   L+  TG+L+D +   LGT+P+ L     + T  V A S R  + Y+   +  
Sbjct: 667 NGVLLRTALDNVTGDLSDTRTRYLGTRPVKLFRVRIQGTEGVIAVSSRTWLNYTYQSRFH 726

Query: 348 YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICH 406
            + ++   + +   F S   P+ +       L I  ++ +  +  + S PL   PR++  
Sbjct: 727 LTPLSYDLLEYASSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTPLQYTPRKLLI 786

Query: 407 QEQSRTFAICSLKNQSCAEESEMH 430
                   +    + +  E +++H
Sbjct: 787 HPPMSNLVLIETDHNAFTEATKLH 810



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 157/345 (45%), Gaps = 44/345 (12%)

Query: 452  EYGCSILSCSFSDDSNV--YYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKE 506
            E   S+  C F    ++  +  VGTA  ++      + G ++VF +  DG KL+ +   +
Sbjct: 882  EAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRAISSGSLIVFRLSPDGSKLEHVHTTQ 941

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDF 565
                  ++  F G+LL  + + +++Y     D G +++  +C   H   L + ++  G  
Sbjct: 942  LDDVPIAMAPFQGRLLVGVGKLLRIY-----DIGKKKMLRKCENKHLPYLVVDIKVMGRR 996

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            + VGD+ +++  L Y+  E  +   A +    + +   ILD +    A+   N+  +R  
Sbjct: 997  VYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLP 1056

Query: 626  SEGATDE------------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
            S+  TD+            +RG L        V+  YH+GE +N     SL+        
Sbjct: 1057 SD-VTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGEGINTLHKVSLI-------P 1108

Query: 667  GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
            G    +++ T++G IG++      E   F + L+ ++R     + G +H  +RS+     
Sbjct: 1109 GGSEVLVYTTLSGSIGILVPFSSKEDSDFFQHLEMHMRSEWSNLVGRDHLSFRSY----- 1163

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             V  K+ +DGDL E +  L  ++  EI+  ++ S  E+ K++E+L
Sbjct: 1164 YVPVKSVIDGDLCEVYNSLDPSKRREIALDLDRSPSEVAKKLEDL 1208


>gi|452845193|gb|EME47126.1| hypothetical protein DOTSEDRAFT_69180 [Dothistroma septosporum NZE10]
          Length = 1223

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 200/855 (23%), Positives = 350/855 (40%), Gaps = 139/855 (16%)

Query: 4    FYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDG 63
             Y  P++L   +L  D  G           L P++   V +L  +   Q+    G     
Sbjct: 414  MYFQPRELTMTHLAVDIPG-----------LHPLLKTKVDNLTNEDAPQIYAIQGTGNKS 462

Query: 64   SLRIVRNGIGI-----NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNL 118
              + +R+G+ +     N   +V    I   W+ +  + D    +L++S       +A ++
Sbjct: 463  QFKTIRHGLDVEVLINNSMGNVPYDNI---WTFKHRSSDDHHKYLLLSSSYGDLTIACSI 519

Query: 119  EDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVN 178
             D +E+ E   F     T+         LVQV +  +R +  +     NEW+SP   +V 
Sbjct: 520  GDSVEQIESSPFLENRATVHAQQMGDATLVQVHARGIRSILESG--AHNEWQSPAHRTVV 577

Query: 179  VATANASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDINPIGENPSYSQIA 236
            VA+AN  Q+LLA     L +  +G DGIL +++   ++  +I+ L +         ++ A
Sbjct: 578  VASANERQLLLALSSAELAFFFMGDDGILNQLEEMPEMSGKITALSVGQTPRGRQQARYA 637

Query: 237  AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-----LLCAFEGISYLLCA------ 285
             VG   D ++R+ S+          L   + PRSV     +  + E +  L  A      
Sbjct: 638  VVGC-DDCTIRVLSI---------ELDSPLEPRSVQALSAIPTSLEVVEMLDPASNTIVN 687

Query: 286  -----LGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIY 340
                 L  G  L  +++  TGEL D +   LGTQP  L      +   + A S RP + +
Sbjct: 688  VVHIGLQSGLYLRAIIDETTGELGDVRTKFLGTQPPRLCPVEVNDQDCILACSSRPWLGF 747

Query: 341  SSNKKLLYSNVNLKEVSHMCPFNSA-AF--PD--SLAIAKEGELTIGTIDDIQ-KLHIRS 394
            +  +  LY+   L       P N+A +F  PD   L   +   L I T+  I+ +L   +
Sbjct: 748  NHPQNNLYTVTPLITE----PINAARSFISPDLSGLCAIQGSSLLIFTVPSIEGRLSHST 803

Query: 395  IPLGEHPRRICHQEQSRTFAIC-------------SLKNQSCAEES-----EMHF----- 431
            I L   PR +        + I               L+ +S  E+      E H      
Sbjct: 804  IDLNYTPRSMTRNPWYPIWYIAESDGNALSKATRDQLRGKSIEEDEGATALEKHLGLPRG 863

Query: 432  -------VRLLDDQTFE-FISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA-YVLPEE 481
                   ++ +D  T    +ST  L   E        +F S D  V+  VGT  ++ P  
Sbjct: 864  VQHWASCIQAVDPVTKNAVVSTVELAENEAALCCTCVAFESRDWEVFLAVGTGQHMQPGT 923

Query: 482  NEPTKGRILVF-IVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWM 535
                 G + ++ +VEDG KL+ + + +    VY++ AFNG+L   +  ++ +Y    K M
Sbjct: 924  GVQAVGYVHIYKLVEDGTKLEFVHKTKFDLPVYTVLAFNGRLALGVGNELFIYDMGIKAM 983

Query: 536  LRD-DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 594
            LR   GT            I++L  Q  G+ IV GD+ + I+ ++YK +   +     D 
Sbjct: 984  LRKARGT-------ATPNQIVSLEAQ--GNRIVCGDVSEGITYVVYKPKFNRMIPFVDDV 1034

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDEERG---------------R 636
               W +   ++D +   G +   NL+ VR   + S+ A +E  G               R
Sbjct: 1035 VQRWTTCTTMVDYETAAGGDKFGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLNGAPYR 1094

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFL 695
            L++   Y   +     +  +LV        G    + +  + G +G++   +  E   F 
Sbjct: 1095 LDLRAHYFCQDIPTSMQRTALV-------AGGQELLFWSGLQGTLGMLVPFVTREDVEFF 1147

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
             +L+  +R     + G +H  +RS+      V  K  +DGDL E F+ LS     +I+  
Sbjct: 1148 TQLEQQMRAEDPPLAGRDHLMYRSY-----YVPVKGVIDGDLCERFMHLSYDGKQKIAAE 1202

Query: 756  MNVSVEELCKRVEEL 770
            ++  V+E+ K+++E+
Sbjct: 1203 VDRGVKEIEKKIQEM 1217


>gi|74190887|dbj|BAE28225.1| unnamed protein product [Mus musculus]
          Length = 937

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 41/461 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
           TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 384 TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 431

Query: 62  DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 432 RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 489

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 490 TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 547

Query: 181 TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 548 AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 607

Query: 239 GMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVLLCAFE----------------GISY 281
           G+  D +VRI SL   + +  + L  + +P +   LC  E                G  Y
Sbjct: 608 GL-VDNTVRIISLDPSDCL--QPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLY 664

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           L   L +G LL  +L+  TG+L+D +   LG++P+ L     +    V A S R  + YS
Sbjct: 665 LNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYS 724

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEH 400
              +   + ++ + +     F S   P+ +       L I  ++ +  +  + + PL   
Sbjct: 725 YQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYT 784

Query: 401 PRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFE 441
           PR+     +S    I    + +  E ++    + + ++  E
Sbjct: 785 PRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE 825


>gi|225448823|ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 199/418 (47%), Gaps = 26/418 (6%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QP    + V + ++  +L PI+D  V +L  +   Q+    G     S+RI+R G+ I+
Sbjct: 385 FQPRGLKNLVRI-DQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAIS 443

Query: 76  EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           E A  +L G+   +W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T
Sbjct: 444 EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTT 501

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 502 PSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGG 559

Query: 195 HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
            L+Y E+   G L EV+  ++  +++CLDI P+ E    S+  AVG + D ++RI SL P
Sbjct: 560 ELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSRFLAVGSY-DNTIRILSLDP 618

Query: 253 D--LNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNM 298
           D  + +++ + +     P S+L    +               +L   L +G L   +++M
Sbjct: 619 DDCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDM 676

Query: 299 KTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSH 358
            TG+L+D +   LG +   L +   +    +   S RP + Y      L + ++ + +  
Sbjct: 677 VTGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEF 736

Query: 359 MCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI 415
              F+S    + +       L + TI+ + +  +   IPL   PR+   Q + +   +
Sbjct: 737 AASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVV 794



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 54/370 (14%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 488
            +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 863  IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 922

Query: 489  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
            I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 923  IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 977

Query: 547  ECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 603
            +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 978  KCENKLFPNTIVSIH--TYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASY 1035

Query: 604  ILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHL 645
             +D D   GA+   N++ VR                  K  +G  +    ++E + ++H+
Sbjct: 1036 HIDFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 1095

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRK 704
            G+ V   +  SL+        G    +I+GTV G +G ++A    +   F   L+ ++R+
Sbjct: 1096 GDVVTCLQKASLI-------PGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQ 1148

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSV 760
                + G +H  +RS          K+ +DGDL E F    LDL R   DE+ +T     
Sbjct: 1149 EHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG--- 1200

Query: 761  EELCKRVEEL 770
             E+ K++EE+
Sbjct: 1201 -EILKKLEEV 1209


>gi|406700450|gb|EKD03620.1| hypothetical protein A1Q2_02097 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1119

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 185/773 (23%), Positives = 305/773 (39%), Gaps = 125/773 (16%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQ 83
            V+V ER++N+ P  DF +V  +      VV  SG+    S R+VR+G+G     ++E + 
Sbjct: 390  VDVRERWMNIAPAKDFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIP 449

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            GI+ MW++ ++ D P    L+VSF   T IL   LE E+   +     +   T       
Sbjct: 450  GIERMWTIPAA-DGPS---LLVSFAYSTTIL--QLEPEVSVFKAADQVTAVPTFAAGLVD 503

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
             + L+QVT   +RL S  +             + NV     ++++ A   G++      D
Sbjct: 504  KSLLLQVTPEGIRLWSDLAAGT---------LAGNVDAPEDNRIVTANVRGNIAVAAFRD 554

Query: 204  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 263
            G +T  + +              G         A+  W           ++ L+  E   
Sbjct: 555  GTVTLFRASSQ------------GLQEVVKGFLAIADWCG---------EIELVAVEGAD 593

Query: 264  GEIIPRSVLLCAFEG----------ISYLLCALGDGHLLNFLLNMKTGELTD-RKKVSLG 312
               + +S+   A+             + +L  L DG  +++ + +   E +D R   SLG
Sbjct: 594  QGTVLKSIREAAYATSLQFQESNNEPTRMLAGLSDGTFVSYSVKLNGAECSDNRHASSLG 653

Query: 313  TQPITLRTF--SSKNTTHVFAA--SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
             +P+ L T   S     HV AA  SDR ++++ S     +S+   K +            
Sbjct: 654  LRPLRLITLDISPNAEEHVVAAGISDRLSLVFESRDHYEFSSSGKKGI------------ 701

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES- 427
                           +  ++KL ++++ LG                +     +S   ++ 
Sbjct: 702  -----------VFERLTSLKKLQVQTLDLGNRSATRVAALPGYNLVVAGTVTRSMDHQTG 750

Query: 428  ---EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 484
               +   V L +  T E +S + L   E   S+ + +       Y  VGTA     ENE 
Sbjct: 751  DVLQSSSVELRNATTLELLSEFQLPEREAVASVNAVTLH--GRKYILVGTAIF---ENED 805

Query: 485  T----------------KGRILVFIVEDG---KLQLIAEKETKGAVYSLNAFNGKLLAAI 525
                             +GR+L+F + +     L L+      G VY     +G L  A 
Sbjct: 806  ALEDATLEDVTSFIATNRGRLLLFQINESAGPSLDLVTSMTFNGPVYDTVVIHGFLAVAT 865

Query: 526  NQKIQLYKWMLRDDGTRELQS-ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            + K+ + +   +     E  S       H LA+    +   +VVGD M+SI +L    E 
Sbjct: 866  STKVSILRLTTQPPSLEEAASFAFAFETHHLAVVEIDKEKRLVVGDAMRSIIVLSVDPES 925

Query: 585  GAIEERARDYNANW---MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 641
            G I    RD NA+    +SAV  ++  + + A+N  NL T R   +G T           
Sbjct: 926  GDIVGDQRDMNAHLVRCLSAVHDVEPGVMI-ADNYANLLTFRLG-KGITP--------AA 975

Query: 642  EYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
               L E V R + G+L    P S  G I    ++  TVNG +GVI  L       L+ LQ
Sbjct: 976  SIGLSEDVTRLQPGTLA---PVSAEGDILRADLLCTTVNGRLGVIGELGKGSIRTLDDLQ 1032

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
             N+ K+ KG GGL   +W+   N     +   F+DGD ++ F  L  +  D+I
Sbjct: 1033 RNMNKLYKGPGGL---EWKESGNMLVPRETVGFIDGDFVQRFSSLDSSLQDKI 1082


>gi|341886293|gb|EGT42228.1| CBN-TEG-4 protein [Caenorhabditis brenneri]
          Length = 1006

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 171/342 (50%), Gaps = 19/342 (5%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L P+ D  + D+ R+   Q+ T  G     +L+++RNG+ I+E A  +L G    +W++
Sbjct: 403 SLSPLTDAVIGDVAREDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTV 462

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D +D+++VVSF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ 
Sbjct: 463 KKNIEDQYDSYIVVSFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIY 520

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
           +  +R + +  R   NEWK+PP   +     N  QV +A  GG LVY E+  +G L E  
Sbjct: 521 AEGIRHIRADKR--INEWKAPPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFT 578

Query: 211 HAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
             +L   +I+C+  + I E    S+  A+G   D +VRI SL P+  L+          P
Sbjct: 579 ERKLFNADIACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPP 637

Query: 269 RSVLLCAF-----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
            S+LL        +G++  +L   L +G L    ++  TG + D +   LGT+P+ L   
Sbjct: 638 ESILLIDTPNDDGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKV 697

Query: 322 SSKNTTHVFAASDRPTVIYSSNKKL---LYSNVNLKEVSHMC 360
             +  + +   S R  ++Y   ++      S VNL+  +  C
Sbjct: 698 QVQGRSAILCTSSRSWLLYHFQRRFHLTPLSYVNLEYAASFC 739


>gi|440792421|gb|ELR13643.1| splicing factor 3b subunit 3, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 1227

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 16/383 (4%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L PI+DF V D+ ++   Q +T  G     SLR++++G+ + E A   L G    ++++
Sbjct: 396 SLAPIMDFKVADMVKEETKQFLTLCGRGPRSSLRLLKHGLAVAEMADSPLPGNPNNIFTV 455

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           R +  D +D++++VSF++ T +L++   D +EE +  GF     TL       + LVQV 
Sbjct: 456 RKNVADEYDSYIIVSFLNATLVLSIG--DNVEEVKDAGFNENASTLNVGLVGDDSLVQVF 513

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
              +R + S  R    EW +P   ++  +  N  QV++A  GG L+Y E+   G L EV 
Sbjct: 514 PTGIRFIRSDKR--ITEWPTPARRTIVRSAINNKQVVIALTGGELLYFELDITGSLVEVG 571

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPR 269
              +  +I+C+DI PI E    ++  AVG + + +VR+ SL   ++ +   +      P 
Sbjct: 572 RKDMGRDIACIDIAPIPEGRLRARFLAVGDYEN-TVRVLSLDPEDVFSSLAVQALPAPPE 630

Query: 270 SVLLCAFEGIS-------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS 322
           S+ +   +G +       +L   L +G L   +L+  TGEL+D +   LG++P+ L    
Sbjct: 631 SLCIVKMKGGTDSSAGTLFLNIGLTNGVLQRTVLDKVTGELSDTRTRFLGSRPVRLLKLR 690

Query: 323 SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 382
             +   + A + R  + Y+    L  + ++   + +   F S   P+ +       L I 
Sbjct: 691 VGDQPAMLALTSRAWLCYNYQLHLHLTPLSYPALDYASNFCSERCPEGMVATIGNALRII 750

Query: 383 TIDDI-QKLHIRSIPLGEHPRRI 404
           + + + +  H   IPL   PR++
Sbjct: 751 SPERLGEVFHQELIPLRYTPRKM 773



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 44/362 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 487
            VRLLD  T + I    LD  E   S  +C F D    ++  VGTA  L   P   +   G
Sbjct: 878  VRLLDVNTKQTIDVVELDNNEAAFSACTCVFHDRGGEIFLVVGTAKGLVLNPRSCD--AG 935

Query: 488  RILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
             I V+ + DG  +  L+ + + +G   ++  F G+LL  I + +++Y     D G R+L 
Sbjct: 936  YIHVYRLLDGGKRFSLVHKTQVEGVPTAVCGFQGRLLVGIGKMLRIY-----DLGKRKLL 990

Query: 546  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
             +C + G    +  + T+G+ I+VGDL +S   + Y+  E  +   A D N  W++A ++
Sbjct: 991  RKCENKGFPHCIQSITTQGERIIVGDLAESFHFVKYRKAENQLNVYADDSNPRWLTASQM 1050

Query: 605  LDDDIYLGAENNFNLFTVRKNSEGATDEERG-----------------RLEVVGEYHLGE 647
            LD D   GA+   N+F VR  SE   + E                   +L+ +  +H+G+
Sbjct: 1051 LDYDTMAGADKFGNVFIVRLPSEVNEELEDNPMGNFLMSKQSLNGAAFKLQTLINFHVGD 1110

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVI 706
             +N     SL         G    +++ T+ G +G +   +  E   F   L+ ++R  +
Sbjct: 1111 TINSMTKASLF-------TGGADVLVYTTLMGGMGALLPFVSREDVDFFSHLEMHMRSEL 1163

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G +H  +RS+         K+ +DGDL E F  L   +   I++ ++ +  E+ K+
Sbjct: 1164 PPLCGRDHLAYRSY-----YFPVKDVIDGDLCEQFSLLPPEKQRTIAEELDRTPGEVLKK 1218

Query: 767  VE 768
            +E
Sbjct: 1219 LE 1220


>gi|341886300|gb|EGT42235.1| hypothetical protein CAEBREN_28831 [Caenorhabditis brenneri]
          Length = 1005

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 171/342 (50%), Gaps = 19/342 (5%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L P+ D  + D+ R+   Q+ T  G     +L+++RNG+ I+E A  +L G    +W++
Sbjct: 403 SLSPLTDAVIGDVAREDAAQLYTLVGRGARSNLKVLRNGLEISEMAVSDLPGNPNAVWTV 462

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D +D+++VVSF++ T  LA+ + D +EE    GF   T T+ C     + LVQ+ 
Sbjct: 463 KKNIEDQYDSYIVVSFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIY 520

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
           +  +R + +  R   NEWK+PP   +     N  QV +A  GG LVY E+  +G L E  
Sbjct: 521 AEGIRHIRADKR--INEWKAPPRRQIVKCCVNRRQVAVALSGGELVYFELDLNGTLNEFT 578

Query: 211 HAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
             +L   +I+C+  + I E    S+  A+G   D +VRI SL P+  L+          P
Sbjct: 579 ERKLFNADIACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPP 637

Query: 269 RSVLLCAF-----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
            S+LL        +G++  +L   L +G L    ++  TG + D +   LGT+P+ L   
Sbjct: 638 ESILLIDTPNDDGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPVKLFKV 697

Query: 322 SSKNTTHVFAASDRPTVIYSSNKKL---LYSNVNLKEVSHMC 360
             +  + +   S R  ++Y   ++      S VNL+  +  C
Sbjct: 698 QVQGRSAILCTSSRSWLLYHFQRRFHLTPLSYVNLEYAASFC 739


>gi|300176205|emb|CBK23516.2| unnamed protein product [Blastocystis hominis]
          Length = 702

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 205/441 (46%), Gaps = 53/441 (12%)

Query: 359 MCPFNS------AAFPDS------LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH 406
           M P +S      A+ PD          A+   L++G IDD++ +H   IPL  +   +  
Sbjct: 227 MAPLDSPPLCSCASLPDEHEHRFFFVSARSSALSLGEIDDVRSVHAARIPLQHNLLALSV 286

Query: 407 QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGC-----SILSCS 461
           Q  +++  +   +  +    +    ++L D +T+      PL   E        SI   S
Sbjct: 287 QPATQSLLLLLSRAAASQNAA---LLQLRDPKTYAIRDELPLKPSEIALCVASGSIFPLS 343

Query: 462 FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 521
            + + N  + VGTA+VLPEENEP++GR+LV    + +L+L+AE    G   S+  F GK+
Sbjct: 344 NAPERNEVFVVGTAFVLPEENEPSQGRLLVLRAVEHRLELVAETMLSGGCLSICLFKGKV 403

Query: 522 LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 581
           +  +N ++Q++    +     +L SE      + +L      + I +GD++ S+  ++YK
Sbjct: 404 VCGVNSELQVFDVDEKTSTISKLASEVACIS-VTSLSPNEADETIALGDILYSV--VVYK 460

Query: 582 -------------HEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 628
                         E  A E R RD  A  +  +     ++ +G +   NL  ++   E 
Sbjct: 461 LVLEVVRGRQLAQLECIASERRRRDVTA--LERLPEAQSEMVVG-DAYGNLMVMQVVEEA 517

Query: 629 ATDEERGRLEVVGE--YHLGEFVNR------FRHGS----LVMRLPDSDVGQIPTVIFGT 676
             D    +  VV +  +HL + +NR      FR G+       R  +S++     + F T
Sbjct: 518 DLDRSNPQKIVVTKESFHLDDQINRFVPVQLFRSGAEDKKKEKRAEESEIAF--NLAFAT 575

Query: 677 VNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
           V+G IG+I +L   ++  L  ++T +  VI  VGGL+H+QWR  N      +    +DGD
Sbjct: 576 VSGRIGMIGALNDREFRMLRAIETAMENVITPVGGLDHKQWRCSNTPFGIKNLAYCIDGD 635

Query: 737 LIESFLDLSRTRMDEISKTMN 757
           L+E FL+L      +I+ +++
Sbjct: 636 LVEMFLELDDESQAKIADSVS 656


>gi|398407593|ref|XP_003855262.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
 gi|339475146|gb|EGP90238.1| hypothetical protein MYCGRDRAFT_69118 [Zymoseptoria tritici IPO323]
          Length = 1218

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 178/836 (21%), Positives = 349/836 (41%), Gaps = 103/836 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P++L   ++  D  G           L P++   V +L  +   Q+    G      
Sbjct: 410  YFQPRELTMTHVACDVPG-----------LHPLIKTKVDNLTSEDAPQIYAIQGTGNKSQ 458

Query: 65   LRIVRNGIGINEQASVELQGIK--GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
             + +R+G+ + E  +  +  +    +W+ +  + D F  +L++S       +A ++ D +
Sbjct: 459  FKTIRHGLNVEEIINNSMGNVPYDNIWTFKHRSTDEFHRYLLLSSSYGDLTIACSIGDSV 518

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E+ E   F     T+         LVQV +  +R +  +     NEW +P   +V VA+A
Sbjct: 519  EQIENSSFLENRATVHAQQMGDATLVQVHARGIRSILESG--ALNEWPTPAHRTVVVASA 576

Query: 183  NASQVLLATGGGHLVYLEI-GDGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAAVGM 240
            N  Q+LLA     L +  +  DGIL +++   ++  +++ L +    +    ++ A VG 
Sbjct: 577  NERQLLLALSSAELAFFFMQDDGILVQLEEMPEMSGKVTALSVGRTPKGRQQAKYAVVGC 636

Query: 241  WTDISVRIFSLP-DLNLITKEHLGGEIIPRSVLLCAFEG------ISYLLCALGDGHLLN 293
              D ++R+ S+  D  L  +       +P S+ +           ++ +   L  G  L 
Sbjct: 637  -DDCTIRVLSIELDSPLEPRSVQALSAVPTSLEVVEMHDPSSNSYVNVVHIGLQSGLYLR 695

Query: 294  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 353
             +++  TGEL D +   LGT+P  L      +   V A S RP + Y+  +   Y+   L
Sbjct: 696  AVIDETTGELGDVRTKFLGTRPPRLCPVEINDQECVLACSSRPWLGYNHPQSQQYTVTPL 755

Query: 354  -------------KEVSHMCPFNSAAFPDSLAIAKEGELTIGTID-DIQKLHIRSIPLGE 399
                          ++  +C    ++       + EG L+  TID +     +   PL  
Sbjct: 756  IAEPIEAARSFISPDLVGLCAIQGSSLLIMQVPSIEGRLSSSTIDLNYTPRAMDRNPL-- 813

Query: 400  HPRRICHQEQSRTFAIC---SLKNQSCAEESEM--------------HF---VRLLDDQT 439
            +P     Q    T +      L+ +S  ++ E               H+   ++ +D  T
Sbjct: 814  YPIWYTAQADGNTLSKAMRDQLRGKSIDDDEEATALEKHLGVSRGTGHWASCIQAIDPIT 873

Query: 440  FEFIS-TYPLDTFEYGCSILSCSF-SDDSNVYYCVGTA-YVLPEENEPTKGRILVF-IVE 495
             + ++ T  L   E    I    F S    V+  VGT  ++ P  ++P+ G + ++ ++E
Sbjct: 874  QKAVTHTIELGENEAALCIACVPFTSRQDEVFLAVGTGQHMSPGTSQPSTGFVHIYRLLE 933

Query: 496  DG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGH 553
            +G KL+ +   +    +Y+L  FNG+L   +  ++ +Y     D G + L  +  G    
Sbjct: 934  EGTKLEFVHRTQFDSPIYALCKFNGRLALGVGNELFIY-----DMGMKHLLRKARGTAVP 988

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
             L  ++ + G+ ++  D+ +S++ ++YK     +     D    W +A  ++D +   GA
Sbjct: 989  NLITHITSVGNRLICADVSESVTYVVYKPAFNRLIPFVDDTIQRWTTATALVDYETVAGA 1048

Query: 614  ENNFNLFTVRKNSEGATD-EERG-----------------RLEVVGEYHLGEFVNRFRHG 655
            +   NL+ VR     +T+ +E G                 RLE+   +   +     +  
Sbjct: 1049 DKFGNLWVVRCPEATSTEADEDGAGGYIMNERSYLGGAPYRLELRSHFFANDIPTSLQRT 1108

Query: 656  SLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
            SLV        G    + +  + G +G++   +  E   F   L++ +R+    + G +H
Sbjct: 1109 SLV-------AGGAEVIFWSGLQGTLGMLVPFVSREDVEFFTALESQMRQEDPPLAGRDH 1161

Query: 715  EQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +RS+      V  K  +DGDL E +L L      +I+  ++ SV+E+ K+V+E+
Sbjct: 1162 LMYRSY-----YVPVKGVIDGDLCERYLGLREDVKGKIAAEVDRSVKEVEKKVQEM 1212


>gi|396488712|ref|XP_003842924.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
 gi|312219502|emb|CBX99445.1| similar to pre-mRNA splicing factor 3b [Leptosphaeria maculans JN3]
          Length = 1236

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 183/819 (22%), Positives = 332/819 (40%), Gaps = 104/819 (12%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 85
             +E+  +L PI+   V +   +   Q+ T +G     S R  RN + + +     L Q  
Sbjct: 410  AVEQMPSLNPIMGMEVANPALEDAPQIYTINGTGGRSSFRSTRNALEVLDLIESPLPQNA 469

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + ++DD  DT +V+     +R L + + D++EE    GF   T TL       +
Sbjct: 470  SDVWTTKLTSDDETDTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGED 527

Query: 146  QLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
             ++Q+    +R +         ++ + +   +W+ P   ++     N  QV +A   G +
Sbjct: 528  CIIQIHPKGIRHIQGIQFPDNDANATHQSLTDWQPPAHRTIVACATNNRQVAIALSSGQI 587

Query: 197  VYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            +Y E   DG L   +    L+  I+CL +  + E    +   AVG  +D +VRIF+L PD
Sbjct: 588  LYFECDSDGSLAMAEEEIALDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIFNLSPD 646

Query: 254  L--NLITKEHLGGEIIPRSVLLCAF------EGIS-YLLCALGDGHLLNFLLNMKTGELT 304
            +  N++    +     P S L           G S +L   L  G  +  +L+  TG++ 
Sbjct: 647  MEGNILRSISVQALTSPPSDLTINLMSDKSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIG 706

Query: 305  DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPF 362
            D ++  LG +PI     +      + A + RP + Y+  +   L  + +N         F
Sbjct: 707  DTRRRFLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNF 766

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ 421
            + + F   + ++   EL I T +D+       +IPL   PR++    +   F I   +  
Sbjct: 767  DGSQFKGIICVSAN-ELRIFTFNDLTDNTTYENIPLKYTPRKMVGYHEQGIFYIIESECN 825

Query: 422  SCAEESEMHFVRLLDDQT----------FEFISTYPLDTFEY--------GC-------- 455
            +   ++  + ++    Q            E     P   F Y         C        
Sbjct: 826  TLNADTRQNLIQKASKQDENGNGEATNGTEESDELPAVDFGYPRAQGRWASCIQAVDPVS 885

Query: 456  --------------SILSCSF----SDDSNVYYCVGTAYVL---PEENEPTKGRILVFIV 494
                          S++S +     S   + +  VGTA  L   P +      +I     
Sbjct: 886  EKAVTHTIELKTNQSLVSAALVFFESRGEDAFLAVGTAKDLSFTPYKYSGASIQIYKISP 945

Query: 495  EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
               + +   E E      +L AF GKL+A + + + LY   ++    R+ Q+       I
Sbjct: 946  NGREFEFFHETEVGEPPLALLAFKGKLIAGVGRHLCLYDCGMK-SVLRKAQAPNCVATRI 1004

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDDDIYLG 612
                ++T+G  +VV D  +S++ +++K +     +   A D      SA ++LD +  +G
Sbjct: 1005 TD--IKTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFADDTVPRHTSASDMLDYETTVG 1062

Query: 613  AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--- 666
             +   N++ VR   K SE + +   G   +V +  LG   NR     LV     +D+   
Sbjct: 1063 GDKFGNIWLVRCPPKVSEASDESPDGSDLLVDKSFLGGTPNRL---DLVAHYFANDIPVS 1119

Query: 667  --------GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                    G    + +  + G +G +       Q+   ++L+  LR+  K + G +H  +
Sbjct: 1120 IQKTVLLSGGERIIFWAGLQGTLGALIPFNSRRQHKMFQQLELQLRQDDKPLSGRDHLAY 1179

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            RS+    K V     +DGDLIE FL LSR + + I+  M
Sbjct: 1180 RSYFAPVKCV-----IDGDLIERFLVLSRDKRESIAGQM 1213


>gi|326510951|dbj|BAJ91823.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 86/471 (18%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
           N+GP++D  + D   + Q Q+ +C G   +GSLR++RNG+ + +    E   QGI G+W+
Sbjct: 480 NVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGITGLWT 539

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF  +  TL C       LVQ+
Sbjct: 540 LRMKRTDTYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPEVCTLACGLIADGLLVQI 598

Query: 151 TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
            S  V+L   TS            +  +W   P  +++V       V +AT     +Y+ 
Sbjct: 599 HSKGVKLCLPTSYAHPEGATLTSPVCVDWY--PDVTISVGAVGHDVVAVATSNPCCLYIL 656

Query: 201 IGDGI------LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG----------MWTDI 244
               +      L E +H QL+YE+SC+ I P  ++   +  +A+G             ++
Sbjct: 657 RVRPLSSLQYELYETQHVQLQYEVSCISI-PEEDSRLRTPSSAIGGDFRERKGNNSVAEV 715

Query: 245 SVRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGI 279
           +VR+F++     P + +I+ E                  LG  +   IP +V + A E  
Sbjct: 716 NVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPENVRVVASERF 775

Query: 280 SYLLCALGDGHLLNFLLNMKTGELTDRKKVS----------------------LGTQPIT 317
            Y+L  L +G LL F    ++G   D+                          +G  P+ 
Sbjct: 776 -YILAGLRNGMLLRF----ESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIGITPVG 830

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L        + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E 
Sbjct: 831 LVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAEN 890

Query: 378 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 426
            L +  +   ++L+ +   +G  PR++ +   SRT  +    L   SC+ +
Sbjct: 891 CLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 941


>gi|357606250|gb|EHJ64976.1| putative Splicing factor 3B subunit [Danaus plexippus]
          Length = 1216

 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 35/377 (9%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   QV    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDELDSLSPILACHVADLTGEDTPQVYLACGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            SLR +R+G+ + E A  EL G    +W++R   DD +D++++VSF++ T +L++   + 
Sbjct: 433 SSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL CH    + LVQV    +R + +  R   NEWK+P   S+    
Sbjct: 491 VEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRV--NEWKAPGKKSIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  +L  ++SC+ +  +      +   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQRAWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLC----AFEGIS----YLLCALGDGH 290
           +  D +VRI SL   + +    +  + +P S   LC     FE  +    +L   L +G 
Sbjct: 609 L-VDNTVRIISLDPADCLAPRSM--QALPASPESLCIVDQPFESGAKSALHLNIGLSNGV 665

Query: 291 LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
           LL   L+  +G+L D +   LG++P+ L     ++   V A S R  + Y    +     
Sbjct: 666 LLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNRF---- 721

Query: 351 VNLKEVSHMCPFNSAAF 367
            +L  +S+ C   +A F
Sbjct: 722 -HLTPLSYECLEYAAGF 737



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 45/350 (12%)

Query: 447  PLDTFEYGCSILSCSFS--DDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGKLQLI 502
            PL+  E   S+    ++   D+  +  VG A   L      ++G + V+ I   GKL+L+
Sbjct: 880  PLEQNEAAVSLCVVRWAALTDNTPHLVVGVAKDALLSPRSCSEGSLHVYKIYNTGKLELV 939

Query: 503  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQT 561
             +        +L AFNGKLLA + + ++LY     D G R+L  +C   H   L   ++T
Sbjct: 940  HKTPIDEYPGALAAFNGKLLAGVGRMLRLY-----DIGRRKLLRKCENRHIPNLIADIKT 994

Query: 562  RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFT 621
                I V D+ +S+  + YK  E  +   A D N  W++   ILD D    A+   N+  
Sbjct: 995  IRQRIFVSDVQESVFCVKYKKRENQLIIFADDTNPRWITNTCILDYDTVAMADKFGNVAV 1054

Query: 622  VR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPD 663
            +R  ++     DE         +RG L       ++   +H+GE V   +  +L+     
Sbjct: 1055 LRLPQSVSDDVDEDPTGNKALWDRGLLNGASQKGDITVNFHVGETVTSLQRATLI----- 1109

Query: 664  SDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
               G    +++ TV+G +GV   LP    E + F + L+ ++R     + G +H  +RS+
Sbjct: 1110 --PGGSEALLYATVSGALGVF--LPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFRSY 1165

Query: 721  NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                     KN +DGDL E F  L   +   I+  +  +  E+ K++E++
Sbjct: 1166 -----YYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTPAEVSKKLEDI 1210


>gi|326519701|dbj|BAK00223.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1360

 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 86/471 (18%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
           N+GP++D  + D   + Q Q+ +C G   +GSLR++RNG+ + +    E   QGI G+W+
Sbjct: 480 NVGPMLDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGITGLWT 539

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           LR    D + +FLV++F+ ETRIL++ L    + ++  GF  +  TL C       LVQ+
Sbjct: 540 LRMKRTDTYHSFLVLAFVEETRILSVGLSFN-DISDAVGFQPEVCTLACGLIADGLLVQI 598

Query: 151 TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
            S  V+L   TS            +  +W   P  +++V       V +AT     +Y+ 
Sbjct: 599 HSKGVKLCLPTSYAHPEGATLTSPVCVDWY--PDVTISVGAVGHDVVAVATSNPCCLYIL 656

Query: 201 IGDGI------LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG----------MWTDI 244
               +      L E +H QL+YE+SC+ I P  ++   +  +A+G             ++
Sbjct: 657 RVRPLSSLQYELYETQHVQLQYEVSCISI-PEEDSRLRTPSSAIGGDFRERKGNNSVAEV 715

Query: 245 SVRIFSL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGI 279
           +VR+F++     P + +I+ E                  LG  +   IP +V + A E  
Sbjct: 716 NVRMFAVIGTHKPSVEVISLEPDEAFRLLSTGSISVNNALGAPVSGCIPENVRVVASERF 775

Query: 280 SYLLCALGDGHLLNFLLNMKTGELTDRKKVS----------------------LGTQPIT 317
            Y+L  L +G LL F    ++G   D+                          +G  P+ 
Sbjct: 776 -YILAGLRNGMLLRF----ESGTSKDQYLPGSFYKESFAPSLNTLLQLVAIRHIGITPVG 830

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L        + +   SDR  ++++S   L YS+++    SH+ P +S   P  L    E 
Sbjct: 831 LVPLRDSANSDIIVLSDRSWLLHASRHSLAYSSISFLPASHVIPVSSVDCPSGLLFVAEN 890

Query: 378 ELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEE 426
            L +  +   ++L+ +   +G  PR++ +   SRT  +    L   SC+ +
Sbjct: 891 CLHLVEMVHGKRLNAQKFSIGGTPRKVLYHSDSRTLLVMRTGLTGASCSSD 941


>gi|218199276|gb|EEC81703.1| hypothetical protein OsI_25307 [Oryza sativa Indica Group]
          Length = 1429

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 228/537 (42%), Gaps = 85/537 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
            N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG+ + +    +    G+ G+W+
Sbjct: 479  NVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRTDPIYHGVTGLWT 538

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            LR    D + +FLV+SF+ ETRIL++ L    +  +  GF +   TL C       LVQ+
Sbjct: 539  LRMKRTDAYHSFLVLSFVEETRILSVGLSFN-DICDAVGFQTDVCTLACGLVADGLLVQI 597

Query: 151  TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
             S  V+L   T+            +  +W   P  +++V     + V++AT     +Y+ 
Sbjct: 598  HSKCVKLCLPTACAHPEGTLLPSPVCADWY--PDVTISVGAVGHNVVVVATSNPCCLYIL 655

Query: 201  IGDGI------LTEVKHAQLEYEISCLDINPIG---ENPSYSQIAAVGMWTDIS--VRIF 249
                +      L E++H QL YE+SC+ I       +N S S   +     D +  +R F
Sbjct: 656  GVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGDFRKDFAANIRKF 715

Query: 250  SL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGISYLLC 284
            ++     P +++I+ E                  LG  I   IP +V   A     Y+L 
Sbjct: 716  AVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAAARF-YILA 774

Query: 285  ALGDGHLLNFLLNMKTGEL----------TDRKKVSL--------GTQPITLRTFSSKNT 326
             L +G LL F      G            T     SL        G  P+ L     +  
Sbjct: 775  GLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGITPVVLVPLHDRAN 834

Query: 327  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 386
              +    DRP +++S+   L YS+++    SH+ P +S   P+ L    E  L +  +  
Sbjct: 835  ADIIVLGDRPWLLHSARHSLAYSSISFLPASHVTPVSSTDCPNGLLFVSENCLHLVEMVH 894

Query: 387  IQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFIS 444
             ++L+ +   +G  PR++ +   SRT  +    L + SC+ +     +  +D      +S
Sbjct: 895  GKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSD-----IVQIDPSNGALLS 949

Query: 445  TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTKGRILVFIVE 495
             +  +  E    +      +D  +   VGT+      ++P  E E  KGR+++  +E
Sbjct: 950  RFKCEPGETAKCMQIAKIGNDQVLI--VGTSKSNGRPMMPNGEAESIKGRLILLSLE 1004


>gi|229577321|ref|NP_001153352.1| splicing factor 3b, subunit 3 [Nasonia vitripennis]
          Length = 1216

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 206/456 (45%), Gaps = 39/456 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYIACGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ FD +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEFDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIIKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAAGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-GIS--------------YLL 283
           +  D +VRI SL   + +    +  + +P +   LC  E GI               +L 
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGIKDDTSEDSNQMQSTLHLN 665

Query: 284 CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 343
             L +G LL  +L+  +G+L+D +   LG++P+ L     +    V A S R  + Y   
Sbjct: 666 IGLQNGVLLRTVLDPISGDLSDTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYYQ 725

Query: 344 KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPR 402
            +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S P    PR
Sbjct: 726 NRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPFEYTPR 785

Query: 403 R-ICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDD 437
           + + H E +    I +  N    E  +   +++ ++
Sbjct: 786 KFVIHNESAHVLLIETEHNAYTEETKQQRRLQMAEE 821



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 39/279 (13%)

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 570
            ++  + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D
Sbjct: 950  AICPYQGRVLVGVGKMLRLY-----DMGKKKLLRKC-ENKHIPNAVICINAIGQRIYVSD 1003

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE--G 628
            + +S+  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  S    
Sbjct: 1004 VQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLASSIND 1063

Query: 629  ATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 672
              DE         +RG L       + V  +H+GE V   +  +L+        G   ++
Sbjct: 1064 DVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSESL 1116

Query: 673  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
            ++ T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         KN
Sbjct: 1117 VYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRAEHPPLCGRDHLSFRSY-----YYPVKN 1171

Query: 732  FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1172 VIDGDLCEQFNSIEPGKQKSISGDLERTPSEVSKKLEDI 1210


>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]
          Length = 1217

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 199/447 (44%), Gaps = 39/447 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYITCGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE----------------GISYL 282
           +  D +VRI SL   + +    +  + +P +   LC  E                   YL
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKDANNSEELSSQQSSLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y  
Sbjct: 666 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSWLSYYY 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 726 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLEYTP 785

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESE 428
           R+      S    I   ++ +  EE++
Sbjct: 786 RKFAIHSDSAHLIIIETEHNAYTEETK 812



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 556
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAI 990

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 617  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 657
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+         KN +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPAKQKSIAGDLERTPSEVSKKLEDI 1211


>gi|307166104|gb|EFN60356.1| Splicing factor 3B subunit 3 [Camponotus floridanus]
          Length = 1201

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 200/447 (44%), Gaps = 39/447 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 368 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYIACGRGPR 416

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 417 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNATLVLSIG--ET 474

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 475 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 532

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 533 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLAVG 592

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS----------------YL 282
           +  D +VRI SL   + +    +  + +P +   LC  E  +                YL
Sbjct: 593 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKEADNSEDSAPQQSSLYL 649

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y  
Sbjct: 650 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYH 709

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 710 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPLEYTP 769

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESE 428
           R+      S    I   ++ +  EE++
Sbjct: 770 RKFAIHTDSAHLVIIETEHNAYTEETK 796



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 129/280 (46%), Gaps = 41/280 (14%)

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 570
            ++  + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D
Sbjct: 935  AICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSD 988

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            + +S+  + YK +E  +   A D +  +++   +LD D    A+   N+  +R  + G  
Sbjct: 989  VQESVYAVRYKRQENQLIVFADDTHPRFITTTCVLDYDTVATADKYGNIAVIRL-ATGIN 1047

Query: 631  DE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
            D+            +RG L       + V  +H+GE V   +  +L+        G   +
Sbjct: 1048 DDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSES 1100

Query: 672  VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            +++ T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         K
Sbjct: 1101 LVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVK 1155

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1156 NVIDGDLCEQFNSIEPVKQKSISGDLERTPSEVSKKLEDI 1195


>gi|302820387|ref|XP_002991861.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
 gi|300140399|gb|EFJ07123.1| hypothetical protein SELMODRAFT_448595 [Selaginella moellendorffii]
          Length = 1292

 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 204/449 (45%), Gaps = 67/449 (14%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
           N+ PI+DF +VD   + Q Q+  C G  ++GS+RI+RNG  + +        QG+ G+W+
Sbjct: 433 NIAPILDFSLVDYYGEKQDQMFACCGGDEEGSVRIIRNGNSVEKLICTPPVYQGVSGIWT 492

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           +R    DP+  F ++SF+ ETR+L++ L + ++ T+  GF SQ  TL C       + QV
Sbjct: 493 MRYRFKDPYHAFFLISFVEETRVLSVGL-NFVDITDAVGFESQVNTLACGLVEDGWVAQV 551

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYL- 199
               V+L S T          S  L   W+  PGY ++V     S+V+LA     L+ + 
Sbjct: 552 WRYEVKLCSPTKAAHPAGVSGSNPLSTTWRK-PGYPISVGAVCRSRVILALARPGLLLML 610

Query: 200 ---EIGDGI--LTEVKHAQLEYEISCLDINPIGE--NPSYSQIAAVGMWTDISVRI---- 248
              +  DG   L E++   +E EISC+ I P G+   P    IA +     +   +    
Sbjct: 611 GATQTSDGSFELVELQLCMMEAEISCISI-PQGDISIPVPPTIAGLHAGNTVPAGLDLGN 669

Query: 249 ------------------------FSLPDLNLITKEHLGGEI---IPRSVLLCAFEGISY 281
                                   F++  ++LIT   +G  +   IP+ V L  F+ + Y
Sbjct: 670 VCVVGTHKPSVELLSIVPGDKFAPFAVGQVSLITS--VGTAVSGCIPQDVRLALFDRL-Y 726

Query: 282 LLCALGDGHLLNF--------LLNMKTGELTDRKKVSLGTQPITLRTF-SSKNTTHVFAA 332
           +L  L +G LL +        L+  K  +L       LG  P+ L    +      + A 
Sbjct: 727 ILAGLRNGMLLRYEWPEDTPSLVLSKPAQLHLVAARRLGVSPVCLVPLEACALRADIIAL 786

Query: 333 SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHI 392
           SDRP ++  + K++ Y++++ +  +H  P  S   P  +    +  L +  ++  + L++
Sbjct: 787 SDRPWLLQMA-KRISYTSISFQPSTHATPVCSKDCPKGIIFLADCSLHLVEMEQSRTLNV 845

Query: 393 RSIPLGEHPRRICHQEQSRTFAICSLKNQ 421
           + + LG   RR+ +  +S    +  L ++
Sbjct: 846 QKLHLGCTGRRVLYHPESGVLIVLRLLSE 874



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 15/201 (7%)

Query: 559  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA--ENN 616
            +  R   I VGD    + L  Y+ +   +E    D     +S   ++D D  +    + N
Sbjct: 1049 ISVRFTTIAVGDCRDGVLLFTYREDSKKLEPIRCDPMRRLVSDCTLVDVDTAVVVDRQGN 1108

Query: 617  FNLFTVRKNSEGATDEERG----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ---I 669
            F   +  + +EG  D   G     LE    +H+GE     R GS   +  +        I
Sbjct: 1109 FCALSANEETEGKCDSNSGSPEKNLEAHCWFHIGEVCTTVRKGSFAFKAVEDSCSVDRLI 1168

Query: 670  P-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
            P      VI  T+ G + +   +  E+Y  L+ LQ  L  +      L ++  R F  + 
Sbjct: 1169 PNMGKSCVIATTLLGSVFIFVRMTGEEYSLLQALQRRLSVLPATAPVLGNDHAR-FRGQG 1227

Query: 725  KTVDAKNFLDGDLIESFLDLS 745
            +    K  LDGDL+E FL+L+
Sbjct: 1228 RPAGVKEVLDGDLLEQFLELT 1248


>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]
          Length = 1217

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 200/447 (44%), Gaps = 39/447 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYIACGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS----------------YL 282
           +  D +VRI SL   + +    +  + +P +   LC  E  +                YL
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKDADNSEDAAPQQSSLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y  
Sbjct: 666 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYH 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 726 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPLEYTP 785

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESE 428
           R+      S    +   ++ +  EE++
Sbjct: 786 RKFAIHTDSAHLVVIETEHNAYTEETK 812



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 41/280 (14%)

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 570
            ++  + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D
Sbjct: 951  AICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSD 1004

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            + +S+  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  + G  
Sbjct: 1005 VQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRL-ATGIN 1063

Query: 631  DE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
            D+            +RG L       + V  +H+GE V   +  +L+        G   +
Sbjct: 1064 DDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSES 1116

Query: 672  VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            +++ T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         K
Sbjct: 1117 LVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVK 1171

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N +DGDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1172 NVIDGDLCEQFNSIEPTKQKSISGDLERTPSEVSKKLEDI 1211


>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]
          Length = 1217

 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 200/447 (44%), Gaps = 39/447 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYIACGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS----------------YL 282
           +  D +VRI SL   + +    +  + +P +   LC  E  +                YL
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKEADNSEDAAPQQSSLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y  
Sbjct: 666 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYH 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 726 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPLEYTP 785

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESE 428
           R+      S    +   ++ +  EE++
Sbjct: 786 RKFAIHADSAHLVVIETEHNAYTEETK 812



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 130/280 (46%), Gaps = 41/280 (14%)

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQTRGDFIVVGD 570
            ++  + G++L  + + ++LY     D G ++L  +C  + HI    + +   G  I V D
Sbjct: 951  AICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAVVSINAIGQRIYVSD 1004

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            + +S+  + YK +E  +   A D +  W++   +LD D    A+   N+  +R  + G  
Sbjct: 1005 VQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRL-ATGIN 1063

Query: 631  DE------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
            D+            +RG L       + V  +H+GE V   +  +L+        G   +
Sbjct: 1064 DDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATLI-------PGGSES 1116

Query: 672  VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            +++ T++G +GV+     HE + F + L+ ++R     + G +H  +RS+         K
Sbjct: 1117 LVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLSFRSY-----YYPVK 1171

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N +DGDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1172 NVIDGDLCEQFNSIEPTKQKSISGDLERTPSEVSKKLEDI 1211


>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]
          Length = 1217

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 201/449 (44%), Gaps = 39/449 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYIACGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFE-GIS---------------YL 282
           +  D +VRI SL   + +    +  + +P +   LC  E G+                YL
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGVKDADNSEDSAPQQSSLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y  
Sbjct: 666 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSWLSYYY 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 726 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFPLEYTP 785

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESEMH 430
           R+      S    +   ++ +  +E++  
Sbjct: 786 RKFAIHADSAHLVVIETEHNAYTDETKQQ 814



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 556
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 617  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 657
             N+  +R  + G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRL-ATGINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+         KN +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPAKQKSISGDLERTPSEVSKKLEDI 1211


>gi|33146591|dbj|BAC79787.1| putative Splicing factor 3B subunit 3 [Oryza sativa Japonica Group]
 gi|222636635|gb|EEE66767.1| hypothetical protein OsJ_23488 [Oryza sativa Japonica Group]
 gi|429459546|gb|AFZ84679.1| spotted leaf 5 [Oryza sativa Japonica Group]
          Length = 1355

 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 131/537 (24%), Positives = 226/537 (42%), Gaps = 85/537 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE--LQGIKGMWS 90
            N+ PI+D  + D   + Q Q+  C G   +GSLR++RNG+ + +    +    G+ G+W+
Sbjct: 479  NVAPILDLAIADHHGEKQDQMFACCGMCPEGSLRVIRNGVNVEKLLRTDPIYHGVTGLWT 538

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            LR    D + +FLV+SF+ ETRIL++ L    +  +  GF +   TL C       LVQ+
Sbjct: 539  LRMKRTDAYHSFLVLSFVEETRILSVGLSFN-DICDAVGFQTDVCTLACGLVADGLLVQI 597

Query: 151  TSGSVRLVSSTS----------RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
             S  V+L   T+            +  +W   P  +++V     + V++AT     +Y+ 
Sbjct: 598  HSKCVKLCLPTACAHPEGTLLPSPVCADWY--PDVTISVGAVGHNVVVVATSNPCCLYIL 655

Query: 201  IGDGI------LTEVKHAQLEYEISCLDINPIG---ENPSYSQIAAVGMWTDIS--VRIF 249
                +      L E++H QL YE+SC+ I       +N S S   +     D +  +R F
Sbjct: 656  GVRSLSSFQYELYEIQHVQLHYEVSCISIPQEDWRLDNSSSSCATSGDFRKDFAANIRKF 715

Query: 250  SL-----PDLNLITKE-----------------HLGGEI---IPRSVLLCAFEGISYLLC 284
            ++     P +++I+ E                  LG  I   IP +V   A     Y+L 
Sbjct: 716  AVIGTHEPSVHIISLEPGEAFQQLAVGHISVNNALGTPISGCIPENVRFVAAARF-YILA 774

Query: 285  ALGDGHLLNFLLNMKTGEL----------TDRKKVSL--------GTQPITLRTFSSKNT 326
             L +G LL F      G            T     SL        G  P+ L     +  
Sbjct: 775  GLRNGMLLRFESQTSKGHCFPGSFYKESSTPCDDTSLMLIAVRRIGITPVVLVPLHDRAN 834

Query: 327  THVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDD 386
              +    DRP ++ S+   L YS+++    SH+ P +S   P  L    E  L +  +  
Sbjct: 835  ADIIVLGDRPWLLQSARHSLAYSSISFLPASHVTPVSSTDCPSGLLFVSENCLHLVEMVH 894

Query: 387  IQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHFVRLLDDQTFEFIS 444
             ++L+ +   +G  PR++ +   SRT  +    L + SC+ +     +  +D      +S
Sbjct: 895  GKRLNAQKFSIGGTPRKVLYHSDSRTLLVLRTGLTSVSCSSD-----IVQIDPSNGALLS 949

Query: 445  TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTKGRILVFIVE 495
             +  +  E    +      +D  +   VGT+      ++P  E E  KGR+++  +E
Sbjct: 950  RFKCEPGETAKCMQIAKIGNDQVLI--VGTSKSNGRPMMPNGEAESIKGRLILLSLE 1004


>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris]
 gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]
          Length = 1217

 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 197/447 (44%), Gaps = 35/447 (7%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   ++    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPELYITCGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKE---------------HLGGEIIPRSVLLCAFEGISYLLC 284
           +  D +VRI SL   + +                   +G +    S  L   +   YL  
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDANNSEDLSPQQSSLYLNI 667

Query: 285 ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK 344
            L +G LL  +L+  +G+L D +   LG++P+ L     +    V A S R  + Y    
Sbjct: 668 GLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSWLSYYYQN 727

Query: 345 KLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR 403
           +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   PR+
Sbjct: 728 RFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLEYTPRK 787

Query: 404 ICHQEQSRTFAICSLKNQSCAEESEMH 430
                 S    I   ++ +  EE++  
Sbjct: 788 FAIHTDSAHLIIIETEHNAYTEETKQQ 814



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 135/294 (45%), Gaps = 41/294 (13%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 556
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 617  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 657
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+         KN +DGDL E F  +  T+   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERTASEVSKKLEDI 1211


>gi|169599248|ref|XP_001793047.1| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
 gi|160704565|gb|EAT90655.2| hypothetical protein SNOG_02443 [Phaeosphaeria nodorum SN15]
          Length = 1246

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 183/822 (22%), Positives = 338/822 (41%), Gaps = 108/822 (13%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 85
             +E   +L PI+   + +   +   Q+ T +GA    + R  RN + + +     L Q  
Sbjct: 410  AVETMPSLNPIMGMEIANPMLEDAPQIYTINGAGGRSTFRTTRNALEVLDLIESPLPQNA 469

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + + +D  DT +V+     +R L + + +++EE    GF + T TL       +
Sbjct: 470  SDVWTTKLTLEDETDTLIVLCL--HSRTLVLKIGEDVEEASNTGFMADTNTLGVQQFGED 527

Query: 146  QLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
             ++QV    +R +         +  +     +W+ P   ++     N  QV +A   G +
Sbjct: 528  CIIQVHPKGIRHIQGIQFPEDGAVATHTSLTDWQPPAHRTIVACATNNRQVAIALSSGQI 587

Query: 197  VYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            +Y E   DG L   +    L+  I+CL I  + E    +   AVG  +D +VRIF+L PD
Sbjct: 588  LYFECDADGSLAMAEEEIALDSTINCLAIPDVPEGSVRAFFMAVGC-SDQTVRIFNLSPD 646

Query: 254  L--NLITKEHLGGEIIPRSVLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELT 304
            +  N++    +     P S L        +  G S +L   L  G  +  +L+  TG++ 
Sbjct: 647  MEGNILRSISVQALTSPPSGLTINMMSDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIG 706

Query: 305  DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPF 362
            D ++  LG +PI     +      + A + RP + Y+  +   L  + +N         F
Sbjct: 707  DTRRRFLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYIAFKSAWNF 766

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDI------QKLHIRSIP---LGEHPRRICHQEQSRTF 413
              + F   + ++   EL I T +D+      + + ++  P   +G H + + +  QS   
Sbjct: 767  EGSQFKGIICVSAN-ELRIFTFNDLTDNTTYETIQLKYTPRKMVGYHEQGVFYVIQSENN 825

Query: 414  AICSLKNQSCAEES-------------------EMHFVRLLDDQTFEFISTYPLDTFEYG 454
             + +   Q    E+                   E    R   D+       YP     + 
Sbjct: 826  TLSADTRQKLIAEADTKQEDEDDAPMEIEGANGETTNGRATSDELPPTAFGYPRAQGNWA 885

Query: 455  C-----------------------SILSCSF----SDDSNVYYCVGTAYVLP-EENEPTK 486
                                    S++S +     S  ++ +  VGTA  L  +    + 
Sbjct: 886  SCIQVVDPVTEKAVTHTVEINANQSLVSAALVYFESRGNDAFLAVGTAKDLSFQPYHYSS 945

Query: 487  GRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
              I V+ I  DG+ L+   E E      +L AF GK++A + + + LY   +R    R+ 
Sbjct: 946  ASIQVYKISPDGRELEFFHETEVTEPPTALLAFKGKMVAGVGRNLALYDCGMRS-VLRKA 1004

Query: 545  QSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAV 602
            Q+       I+ L  +T+G  +VV D ++S++ +++K +     +     D      +  
Sbjct: 1005 QATNCVPTRIVDL--KTQGSRLVVSDSVQSVTYVVHKDQIHPNRMIPFIDDTIQRHTTCT 1062

Query: 603  EILDDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNR------FR 653
            E+LD D  +G +   NL+ VR   K SE + +   G   +V + +LG   NR      + 
Sbjct: 1063 EMLDYDTTVGGDKFGNLWLVRCPQKVSESSDESPDGSDILVDKSYLGGTANRLDSVAHYF 1122

Query: 654  HGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVG 710
               + + +  + +  G    + +  + G +G +       Q+   ++L+  LR   K + 
Sbjct: 1123 ANDIPISIQKTHLLSGAERIIFWAGLQGTLGALIPFNSRRQHKMFQQLELQLRSDDKPMS 1182

Query: 711  GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
            G +H  +RS+ N  K+V     +DGDLIE FL LSR + + I
Sbjct: 1183 GRDHLAFRSYFNPVKSV-----IDGDLIERFLVLSRDKRESI 1219


>gi|308505958|ref|XP_003115162.1| CRE-TEG-4 protein [Caenorhabditis remanei]
 gi|308259344|gb|EFP03297.1| CRE-TEG-4 protein [Caenorhabditis remanei]
          Length = 1013

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 182/397 (45%), Gaps = 29/397 (7%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L P+ D  + D+ R+   Q+ T  G      ++++RNG+ I+E A  +L G    +W++
Sbjct: 403 SLSPLTDAVIGDIAREDAAQLYTLIGRGSRSHMKVLRNGLEISEMAVSDLPGNPNAVWTV 462

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D +D+++VVSF++ T  LA+ + D +EE    GF   T T+ C     + LVQV 
Sbjct: 463 KKNIEDQYDSYIVVSFVNAT--LALTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQVI 520

Query: 152 SGSVRLVSSTSRELR-----NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGI 205
              +   S   R +R     NEWK PP   +     N  QV +A  GG LVY E+  +G 
Sbjct: 521 RNQI--YSEGIRHIRADKRINEWKVPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGT 578

Query: 206 LTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLG 263
           L E    +L   +I+C+  + I E    S+  A+G   D +VRI SL P+  L+      
Sbjct: 579 LNEFTERKLFNADIACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQN 637

Query: 264 GEIIPRSVLLCAF-----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
               P S+LL        +G++  +L   L +G L    ++  TG + D +   LGT+P+
Sbjct: 638 LPCPPESILLIDTPNEDGKGVAAVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRPV 697

Query: 317 TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
            L     +  + +   S R  ++Y   ++   + ++   + +   F S    + +     
Sbjct: 698 KLFKVQCQGRSAILCTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGIVAISA 757

Query: 377 GELTI------GTIDDIQKLHIRSIP--LGEHPRRIC 405
             L I      G   ++Q    +  P  +  HP   C
Sbjct: 758 STLRIIAAEKLGVAFNVQSFEHKLTPRRVAVHPTMPC 794


>gi|308812436|ref|XP_003083525.1| UV-damaged DNA binding protein 1 (ISS) [Ostreococcus tauri]
 gi|116055406|emb|CAL58074.1| UV-damaged DNA binding protein 1 (ISS), partial [Ostreococcus
           tauri]
          Length = 265

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 70/94 (74%)

Query: 606 DDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
           DD+ YLGAEN+ NLFTV +N    TDEER RLE+ GEYHLGE VN F  GSLVM L D +
Sbjct: 2   DDETYLGAENSLNLFTVSRNVNAVTDEERSRLEITGEYHLGELVNAFAPGSLVMSLRDGE 61

Query: 666 VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
              +PT++FGT NGVIGV+ASLP + Y F E+LQ
Sbjct: 62  SLSVPTLLFGTANGVIGVLASLPKDVYEFTERLQ 95


>gi|268568396|ref|XP_002640241.1| C. briggsae CBR-TAG-203 protein [Caenorhabditis briggsae]
          Length = 1218

 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 182/384 (47%), Gaps = 18/384 (4%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L P+ D  + D+ R+   Q+ T  G      ++++RNG+ I+E A  +L G    +W++
Sbjct: 402 SLSPLTDAVIGDIAREDAAQLFTLVGRGARSHMKVLRNGLEISEMAVSDLPGNPNAVWTV 461

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D +D+++VVSF++ T  L + + D +EE    GF   T T+ C     + LVQ+ 
Sbjct: 462 KKNIEDQYDSYIVVSFVNAT--LTLTIGDTVEEASDSGFLPTTPTIGCSMIGDDSLVQIY 519

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
           S  +R + +  R   NEWK+PP   +     N  QV +A  GG LVY E+  +G L E  
Sbjct: 520 SEGIRHIRADKR--INEWKAPPRRQIVKCAVNRRQVAVALSGGELVYFELDLNGTLNEFT 577

Query: 211 HAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIP 268
             +L   +I+C+  + I E    S+  A+G   D +VRI SL P+  L+          P
Sbjct: 578 ERKLFNADIACMTFSEISEGELNSRFLALGT-VDNAVRIISLDPNDMLMPLSTQNLPCPP 636

Query: 269 RSVLLCAF-----EGIS--YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
            S+LL        +G++  +L   L +G L    ++  TG + D +   LGT+P  L   
Sbjct: 637 ESILLIDTPNEDGKGVASVHLNIGLQNGCLFRNTVDNVTGAIMDTRTRYLGTRP-KLFKV 695

Query: 322 SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
             +  + +   S R  ++Y   ++   + ++   + +   F S    + +       L I
Sbjct: 696 QVQGRSAILCTSSRSWLLYHFQRRFHLTPLSYANLEYAASFCSNQCAEGVVAISASTLRI 755

Query: 382 GTIDDIQ-KLHIRSIPLGEHPRRI 404
              + +    +++S      PRRI
Sbjct: 756 IAAEKLGVAFNVQSFEHKMTPRRI 779



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 143/309 (46%), Gaps = 39/309 (12%)

Query: 484  PTKGRILVFIVEDG--KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
            P +G +  F +     +   +   ET   V +++ F G  L    + +++Y     D G 
Sbjct: 921  PVRGCVYTFHLSPNGDRFDFLHRTETPLPVGAIHDFRGMALVGFGKFLRMY-----DIGQ 975

Query: 542  RELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 600
            ++L ++C +    + +  +Q+ G  I+V D  +S+  L Y+  +  +   A D    ++S
Sbjct: 976  KKLLAKCENKNFPVNIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLVVFADDTTPRYVS 1035

Query: 601  AVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------ERG-------RLEVVGE 642
             V +LD      A+   NL  VR   + +E   D+        +RG       ++E+V  
Sbjct: 1036 CVCVLDYHTVAIADKFGNLSVVRLPERVNEDVQDDPTVSKSVWDRGWLNGASQKVELVAN 1095

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTN 701
            + +G+ +   +  SL   +P    G    +++ T+ G IG + S +  ++  F   L+ +
Sbjct: 1096 FFIGDTITSLQKTSL---MP----GANEALVYTTIGGAIGCLVSFMSKDEVDFFTNLEMH 1148

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
            +R     + G +H  +RS+    K+V     +DGD+ E F  +  ++  E+++ +  +V 
Sbjct: 1149 VRSEYPPLCGRDHLSYRSYYAPCKSV-----IDGDICEQFSLMELSKQKEVAEELGKTVS 1203

Query: 762  ELCKRVEEL 770
            E+ K++E++
Sbjct: 1204 EISKKLEDI 1212


>gi|452002380|gb|EMD94838.1| hypothetical protein COCHEDRAFT_1128717 [Cochliobolus heterostrophus
            C5]
          Length = 1235

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 186/823 (22%), Positives = 335/823 (40%), Gaps = 113/823 (13%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 85
             +E   +L PI+D  V +   +   Q+ T +G     S R  RN + + +     L Q  
Sbjct: 404  AVEAMPSLNPIMDMEVANPALEDAPQIYTINGTGGRSSFRTTRNALEVLDLIESPLPQNA 463

Query: 86   KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
              +W+ + +++D  DT +V+     +R L + + D++EE    GF   T TL       +
Sbjct: 464  SDVWTTKLTSEDETDTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGED 521

Query: 146  QLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
             ++Q+    +R +         +S +     +W+ P   ++     N  QV +A   G +
Sbjct: 522  CIIQIHPKGIRHIQGIQFPNDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQI 581

Query: 197  VYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            +Y E   DG L   +    L+  I+CL +  + E    +   AVG  +D +VRI++L PD
Sbjct: 582  LYFECDSDGSLAMAEEEIVLDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIYNLSPD 640

Query: 254  L--NLITKEHLGGEIIPRSVLLC------AFEGIS-YLLCALGDGHLLNFLLNMKTGELT 304
            +  N++    +     P S L        +  G S +L   L  G  +  +L+  TG++ 
Sbjct: 641  MEGNILRSISVQALTSPPSDLTVNLMTDKSSRGYSQFLHIGLRSGVYIRSVLDEMTGDIG 700

Query: 305  DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPF 362
            D ++  LG +PI     +      + A + RP + Y+  +   L  + +N         F
Sbjct: 701  DTRRRFLGPEPIKFAKVTVAGEPAILAMTSRPWLGYTHPRTGVLQLTPLNYISFKSAWNF 760

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIP--------LGEHPRRICHQEQSRTF 413
            + + F   + ++   EL I T +D+       SIP        +G H + + +  QS   
Sbjct: 761  DGSQFKGIICVSAN-ELRIFTFNDLTDNTTYESIPLKYTPRKMVGYHDQGVFYVIQSDNN 819

Query: 414  AICSLKNQSC---------------------------------------AEESEMHFVRL 434
             I + + Q                                         A+ S    +++
Sbjct: 820  TISADRRQQLIAQSGGKKEDGTNGSMETEQSNGATDSDEFPAVDFGYPRAQGSWASCIQV 879

Query: 435  LDDQTFEFISTYPLDTFEYGCSILSCSF----SDDSNVYYCVGTAYVL---PEENEPTKG 487
            +D  T E   T+ ++      S++S +     S +   +  VGTA  L   P +      
Sbjct: 880  VDPVT-EKAVTHTIE-LNGNISLVSAALVFFESRNDEAFLAVGTAKDLSFTPYKFSSASI 937

Query: 488  RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            +I        +L+   E        +L AF GKLLA I + + LY   ++    R+ Q+ 
Sbjct: 938  QIYKINPTGRELEFFHETTVSDPPLALLAFKGKLLAGIGRHLCLYDCGMKS-VLRKAQAP 996

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEIL 605
                  I  L  +T+G  +VV D  +S++ +++K +     +     D  A   +A E+L
Sbjct: 997  NCVPTRITGL--KTQGSRLVVSDQAQSVTYVVHKDQVHPNRLIPFVDDTVARHTTASEML 1054

Query: 606  DDDIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 662
            D D  +G +   N++ VR   K SE + +   G   +V + +LG   NR     L+    
Sbjct: 1055 DYDTTVGGDKFGNIWLVRCPQKVSESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYF 1111

Query: 663  DSDV-----------GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVG 710
             +D+           G    V +  + G +G +        +   ++L+  LR   K + 
Sbjct: 1112 TNDIPVSIQKTVLLSGGERVVFWAGLQGTLGALIPFNSRRSHKMFQQLELQLRSDDKPLS 1171

Query: 711  GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
            G +H  +RS+    K+V     +DGDLIE FL L R + + I+
Sbjct: 1172 GRDHLAFRSYFAPVKSV-----IDGDLIERFLVLPRDKRESIA 1209


>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera]
 gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]
          Length = 1217

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 39/449 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L           ++   +L PI+   V DL  +   Q+    G    
Sbjct: 384 TFFFAPRPLRNLVL-----------VDEMDSLSPIMACQVADLANEDTPQLYITCGRGPR 432

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            +LR++R+G+ ++E A  EL G    +W+++   D+ +D +++VSF++ T +L++   + 
Sbjct: 433 STLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVNATLVLSIG--ET 490

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++    
Sbjct: 491 VEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKR--VNEWKAPGKKTIVKCA 548

Query: 182 ANASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  E+ C+ +  +      S   AVG
Sbjct: 549 VNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAIGEQRSWFLAVG 608

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCAFEGIS----------------YL 282
           +  D +VRI SL   + +    +  + +P +   LC  E  +                YL
Sbjct: 609 L-QDNTVRIISLDPSDCLAPRSM--QALPAAAESLCIVEMGAKDANNSEELSLQQSSLYL 665

Query: 283 LCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
              L +G LL  +L+  +G+L D +   LG++ + L     +    V A S R  + Y  
Sbjct: 666 NIGLQNGVLLRTVLDPISGDLADTRTRYLGSRAVKLFRIKMQGNQAVLAMSSRSWLSYYY 725

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHP 401
             +   + ++ + +     F+S   P+ +       L I  ++ +  +  + S PL   P
Sbjct: 726 QNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQISFPLEYTP 785

Query: 402 RRICHQEQSRTFAICSLKNQSCAEESEMH 430
           R+      S    I   ++ +  EE++  
Sbjct: 786 RKFAIHSDSAHLIIIETEHNAYTEETKQQ 814



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 41/294 (13%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LA 556
            L+L+ +        ++  + G++L  + + ++LY     D G ++L  +C  + HI    
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLY-----DMGKKKLLRKC-ENKHIPNAV 990

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
            + +   G  I V D+ +S+  + YK +E  +   A D +  W++   +LD D    A+  
Sbjct: 991  VSINAIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKF 1050

Query: 617  FNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGSL 657
             N+  +R  S G  D+            +RG L       + V  +H+GE V   +  +L
Sbjct: 1051 GNIAVIRLAS-GINDDVDEDPTGNKALWDRGLLNGASQKADTVACFHVGETVMSLQKATL 1109

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
            +        G   ++++ T++G +GV+     HE + F + L+ ++R     + G +H  
Sbjct: 1110 I-------PGGSESLVYTTLSGTVGVLVPFTSHEDHDFFQHLEMHMRSEHPPLCGRDHLS 1162

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+         KN +DGDL E F  +   +   IS  +  +  E+ K++E++
Sbjct: 1163 FRSY-----YYPIKNVIDGDLCEQFNSIEPAKQKSISSDLERTASEVSKKLEDI 1211


>gi|298713790|emb|CBJ27162.1| spliceosomal protein sap, putative [Ectocarpus siliculosus]
          Length = 1256

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 185/393 (47%), Gaps = 20/393 (5%)

Query: 28  LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-K 86
           L+   +L P+ D  V DL R+   Q+ T  G     +LRI+R+G+ + E A  +L G+  
Sbjct: 407 LDEVESLAPLTDMLVGDLAREDTPQMYTLCGRGNRSTLRILRHGLAVTELAENDLPGVPS 466

Query: 87  GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ 146
            +++ +    D +D ++V+SF + T +L   ++D +EE E  GF + + TL       N+
Sbjct: 467 AVFAFKERLTDDYDRYIVLSFTNATMVL--EVQDSVEEVENSGFLATSSTLDVKLMANNK 524

Query: 147 LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI- 205
           ++QV S  +R++     +   EW++P    +  A AN  QV+LA  GG +++ E+ + + 
Sbjct: 525 ILQVYSHGLRVI--MKGQPPQEWRAPGKKQIEKACANERQVVLALAGGEIIFFELDEAMQ 582

Query: 206 -LTEVKHAQL-EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 263
            + EV   QL   EI+CL++  + ++   +   AVG W   +V+I  L   NL+ +  + 
Sbjct: 583 NIQEVGTKQLGGVEIACLEMGEVPKDRVRAPFLAVGDWNG-NVKILGLSPENLLEQVAMI 641

Query: 264 GEIIPRSVLLCAFEGIS----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 313
               P   L  A               +L   L  G      ++   G L+D ++  LG+
Sbjct: 642 NLPHPAESLCLAHMAAEQAAGGSNEQLFLYIGLASGVCQRVAVDATAGTLSDPRQRFLGS 701

Query: 314 QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
           +P+ L     ++   V A S R  + Y+   +   + ++   +     F++   P+ +  
Sbjct: 702 KPVKLFRIQVQDKRGVLALSSRSWLSYNYQGRYQMTPLSYDPLDFAAEFSTEMCPEGVVA 761

Query: 374 AKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC 405
               +L I  ++ + +  +  ++PL   PR+I 
Sbjct: 762 VSGEKLRIFGVERLGEVFNQAALPLKYTPRQIA 794



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 160/361 (44%), Gaps = 42/361 (11%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL 490
            +RLLD      +    LD  E   S+   +F + +   +  VGTA  L       +G  +
Sbjct: 909  IRLLDPVEGTTVECLDLDDNEAALSVAPVAFHNRNGEAFVAVGTAKSLTFHPRGHEGCFV 968

Query: 491  -VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC- 548
             V+ + + +L L+ + E      ++  F G+LL  + Q +++Y     D G ++L  +C 
Sbjct: 969  HVYRILENRLVLLHKTEVPDVPLAMKEFQGRLLVGVGQSLRMY-----DLGRKKLLRKCE 1023

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
                  + + +   GD +  GD M+S     Y+  E  + E A D    +M+   +LD D
Sbjct: 1024 NKRMPSMVVSLTVTGDRVFAGDQMESCHCFKYRRAENRLVEFADDQVPRFMTKTCLLDYD 1083

Query: 609  IYLGAENNFNLFTVRKNSEGATDEER-----------------GRLEVVGEYHLGEFVNR 651
               GA+   N+F +R   + + D +                   +++   ++H+GE V+ 
Sbjct: 1084 SIAGADKFGNIFVLRVPLDVSDDVDNPTGNRLLWDSGHLSGAPNKVQQQLQFHVGEVVSS 1143

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKG 708
             R  +LV        G    +++ T+NG IG +  LP    +   F   ++  +R+    
Sbjct: 1144 LRRTTLV-------PGGAEVLLYSTINGSIGAL--LPFKSRDDVDFFTHMEMYMRQEKPT 1194

Query: 709  VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 768
            + G +H  +RS+      + AK+ +DGDL E F  L   +   ++  ++ +V E+ K++E
Sbjct: 1195 LCGRDHISYRSY-----YLPAKDVIDGDLCEQFSSLPFEKQKLVANGLDRTVGEVVKKLE 1249

Query: 769  E 769
            +
Sbjct: 1250 D 1250


>gi|326497839|dbj|BAJ94782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1227

 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 194/430 (45%), Gaps = 23/430 (5%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QP A  + V + E   +L PI+D  + +L  +   QV T  G     +LRI+R G+ I+
Sbjct: 396 FQPRALKNLVRIDE-IESLMPIMDMRIANLFDEETPQVYTACGRGSRSTLRILRPGLAIS 454

Query: 76  EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 455 EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSHFLDTT 512

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 513 HSLAVSLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 570

Query: 195 HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
            L+Y E+   G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI S  P
Sbjct: 571 ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSFDP 629

Query: 253 DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 300
           D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 630 DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 689

Query: 301 GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
           G+L+D +   LG +P  L      +   +   S RP + Y      L + ++   +    
Sbjct: 690 GQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAA 749

Query: 361 PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SL 418
            F+S    + +       L I TI+ + +  +  SIPL   PR+     + +  A+  S 
Sbjct: 750 SFSSDQCSEGVVAVAGDALRIFTIERLGETFNETSIPLRYTPRKFVILPKKKYLAVIESD 809

Query: 419 KNQSCAEESE 428
           K    AE+ E
Sbjct: 810 KGAFSAEQRE 819



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 160/364 (43%), Gaps = 42/364 (11%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 487
            +R+LD ++ +      L   E   SI + +F D +      VGT   L   P+ +  +  
Sbjct: 876  IRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGLQFWPKRSLASGF 935

Query: 488  -RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
              I  F+ E   L+L+ + + +    SL  F G+LLA +   ++LY     D G R+L  
Sbjct: 936  IHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DLGKRKLLR 990

Query: 547  ECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +
Sbjct: 991  KCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANHI 1050

Query: 606  DDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGE 647
            D D   GA+   N++  R                  K  +G  +    ++E + ++H+G+
Sbjct: 1051 DFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGD 1110

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 706
             V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+  
Sbjct: 1111 VVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQEH 1163

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +  E+ K+
Sbjct: 1164 PPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEILKK 1218

Query: 767  VEEL 770
            +E++
Sbjct: 1219 LEDI 1222


>gi|303285956|ref|XP_003062268.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456679|gb|EEH53980.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1213

 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 18/384 (4%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L P++D    +L  +   QV    GA    +LR++R G+ ++E A   L G    ++++
Sbjct: 404 SLCPVLDAQCHNLTSEETPQVYALCGAGSRSTLRVLRQGVALSEMAVSPLPGNPNAVFTV 463

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + +  D FD ++VVSF++ T +L++   + +EE    GF   T TL       + L+Q  
Sbjct: 464 KKNIADEFDAYIVVSFVNATLVLSIG--ETVEEVSDSGFLGTTPTLSASLLGDDSLLQAH 521

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-GDGILTEVK 210
            G +R V +  R   NEW+ P   ++     N  QV++A  GG ++Y E+   G L E++
Sbjct: 522 PGGLRHVRADKR--INEWRCPGRKTITRVACNNRQVVIALSGGEIIYFELDSTGQLMEIE 579

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
             +   +++CL + P+ E    ++  AVG + D +VR+ SL  D  L T         P 
Sbjct: 580 KLETNGDVACLHVGPVPEGSLRNRFLAVGSF-DSTVRVLSLSADDCLQTMGVQALAAAPC 638

Query: 270 SVL-LCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH 328
           S+L L   EG  YL   L +G LL   ++  TG+L+D +   LG +P  L   + +    
Sbjct: 639 SLLMLQTREGGLYLNVGLANGVLLRAEVDRVTGQLSDTRARFLGARPPKLHGATVRGQPA 698

Query: 329 VFAASDRPTVIYSS-NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 387
           + A S RP + +    ++   + ++ + + H   F S   P+ +       L I +++ +
Sbjct: 699 MLALSSRPWLGHVDLQRRFALAPLSYEALEHAADFTSDQCPEGVVAVAGSTLRIVSVERL 758

Query: 388 ------QKLHIRSIP--LGEHPRR 403
                     +R  P  L  HP R
Sbjct: 759 GDAFNQTSCKLRYTPRQLTVHPDR 782



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 43/332 (12%)

Query: 462  FSDDSNVYYCVGTAYVLPEENEPTKGRI--LVFIVEDGKLQLIAEKETKGAVYSLNAFNG 519
            F   + V+  VGTA  L        G    L   +EDG + L+ +    G   ++  F G
Sbjct: 897  FPVANEVFLAVGTAVGLTFAPRDCDGGFVHLYRYLEDGTVTLVHKTPLDGVPGAMCGFKG 956

Query: 520  KLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSI 575
            +LL      ++LY    K +LR    R   +            V   GD I VGD+ +S 
Sbjct: 957  RLLLGCGNALRLYDFGKKKLLRKVENRNFPN--------FITTVHASGDRIYVGDVQESF 1008

Query: 576  SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------------ 623
              + YK E+ ++   A D     ++A   LD D   GA+   N+F  R            
Sbjct: 1009 HFVKYKREDLSLIIVADDVQPRHITAALPLDYDTMAGADKFGNVFVARLAQDVSADIEED 1068

Query: 624  ----KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
                K S G  +    ++E V ++H+GE V     G+L         G +  +++ T+ G
Sbjct: 1069 PTGGKASGGTLNGAPRKVEHVAQFHVGETVCALTKGTL-------QAGGLECMLYATLMG 1121

Query: 680  VIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
             +G +        + F   L+ ++R+    + G +H  +RS          K+ +DGDL 
Sbjct: 1122 TVGALMPFTSRADVDFATHLEMHVRQENPPLLGRDHMAYRS-----AYFPVKDVVDGDLC 1176

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            E ++ L       I++ M+ +  E+ K++E+L
Sbjct: 1177 EQYVTLPAETQRAIAEEMDRTPAEVMKKLEDL 1208


>gi|297598550|ref|NP_001045829.2| Os02g0137400 [Oryza sativa Japonica Group]
 gi|255670583|dbj|BAF07743.2| Os02g0137400 [Oryza sativa Japonica Group]
          Length = 845

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
           +L PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W++
Sbjct: 28  SLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTV 87

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV 
Sbjct: 88  KKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVH 145

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
              +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 146 PNGIRHIREDGR--VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVE 203

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
              +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P 
Sbjct: 204 KQDMSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPE 262

Query: 270 SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
           S++    +               +L   L +G L    ++M TG+L+D +   LG +P  
Sbjct: 263 SLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPK 322

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L      +   +   S RP + Y      L + ++   +     F+S    + +      
Sbjct: 323 LFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGD 382

Query: 378 ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 428
            L I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 383 ALRIFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 435



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 487
           +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 494 IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 552

Query: 488 RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
            I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 553 FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 607

Query: 546 SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
            +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 608 RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 667

Query: 605 LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 646
           +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 668 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 727

Query: 647 EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 705
           + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 728 DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 780

Query: 706 IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
              + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 781 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 835

Query: 766 RVEEL 770
           ++E++
Sbjct: 836 KLEDI 840


>gi|125580741|gb|EAZ21672.1| hypothetical protein OsJ_05303 [Oryza sativa Japonica Group]
          Length = 1224

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
           +L PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W++
Sbjct: 407 SLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTV 466

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV 
Sbjct: 467 KKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVH 524

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
              +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 525 PNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVE 582

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
              +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P 
Sbjct: 583 KQDMSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPE 641

Query: 270 SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
           S++    +               +L   L +G L    ++M TG+L+D +   LG +P  
Sbjct: 642 SLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPK 701

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L      +   +   S RP + Y      L + ++   +     F+S    + +      
Sbjct: 702 LFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGD 761

Query: 378 ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 428
            L I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 762 ALRIFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 814



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 487
            +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 873  IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 931

Query: 488  RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
             I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 932  FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 986

Query: 546  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 987  RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1046

Query: 605  LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 646
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 1047 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1106

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 705
            + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 1107 DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 1159

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
               + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 1160 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 1214

Query: 766  RVEEL 770
            ++E++
Sbjct: 1215 KLEDI 1219


>gi|401882870|gb|EJT47110.1| hypothetical protein A1Q1_04103 [Trichosporon asahii var. asahii CBS
            2479]
          Length = 1107

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 178/773 (23%), Positives = 299/773 (38%), Gaps = 137/773 (17%)

Query: 25   VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVE-LQ 83
            V+V ER++N+ P  DF +V  +      VV  SG+    S R+VR+G+G     ++E + 
Sbjct: 390  VDVRERWMNIAPAKDFAIVKEDDGRVSHVVVASGSASSNSFRVVRSGVGFENLMTIEEIP 449

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
            GI+ MW++ ++ D P    L+VSF   T IL   +E E+   +     +   T       
Sbjct: 450  GIERMWTIPAA-DGPS---LMVSFAYSTTIL--QIEPEVSVFKAADQVTAVPTFAAGLVD 503

Query: 144  YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
             + L+QVT   +RL S  +  +          + NV     +++  A   G++      D
Sbjct: 504  KSLLLQVTPEGIRLWSDLAAGM---------LAGNVDAPEDNRIATANVRGNIAVAAFRD 554

Query: 204  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLG 263
            G +T  + +              G         A+  W           +++L+  E   
Sbjct: 555  GTVTLFRASSQ------------GLQEVVKGFLAIADWCG---------EIDLVAVEGAD 593

Query: 264  GEIIPRSVLLCAFEG----------ISYLLCALGDGHLLNFLLNMKTGELTD-RKKVSLG 312
               + +S+   A+             + LL  L DG  +++ + +   E +D R   SLG
Sbjct: 594  QGTVLKSIREAAYATSLQFQESNNEPTRLLAGLSDGTFVSYSVKLNGAECSDSRHASSLG 653

Query: 313  TQPITLRTF--SSKNTTHVFAA--SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
             +P+ L     S     HV AA  SDR ++++ S     +S+   K +            
Sbjct: 654  LRPLRLIALDISPNAEEHVVAAGISDRLSLVFESRDHYEFSSSGKKGI------------ 701

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES- 427
                           +  ++KL ++++ LG                +     +S   ++ 
Sbjct: 702  -----------VFERLTSLKKLQVQTLDLGNRSATRVAALPGYNLVVAETVTRSMDHQTG 750

Query: 428  ---EMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 484
               +   V L +  T E +S + L   E   S+ + +       Y  VGTA     ENE 
Sbjct: 751  DVLQSSSVELRNATTLELLSEFQLPEREAVASVNAVTLH--GRKYILVGTAIF---ENED 805

Query: 485  T----------------KGRILVFIVEDG---KLQLIAEKETKGAVYSLNAFNGKLLAAI 525
                             +GR+L+F + +     L L+      G VY     +G L  A 
Sbjct: 806  ALEDATLEDVTSFIATNRGRLLLFQINESAGPSLDLVTSMTFNGPVYDTVVIHGFLAVAT 865

Query: 526  NQKIQLYKWMLRDDGTRELQS-ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            + K+ + +   +     E  S       H LA+    +   +VVGD M+SI +L    E 
Sbjct: 866  STKVSILRLTTQPPSLEEAASFAFAFETHHLAVVEIDKEKRLVVGDAMRSIIVLSVDPES 925

Query: 585  GAIEERARDYNANW---MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVG 641
            G I    RD NA+    +SAV  ++  + +              ++G T           
Sbjct: 926  GDIVGDQRDMNAHLVRCLSAVHDVEPGVMI--------------ADGITP--------AA 963

Query: 642  EYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
               L E V R + G+L    P S  G I    ++  TVNG +GVI  L       L+ LQ
Sbjct: 964  SIGLSEDVTRLQPGTLA---PVSAEGDILRADLLCTTVNGRLGVIGELGKGSIRTLDDLQ 1020

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
             N+ K+ KG GGL   +W+   N     +   F+DGD ++ F  L  +  D+I
Sbjct: 1021 RNMNKLYKGPGGL---EWKESGNMLVPRETVGFIDGDFVQRFSSLDSSLQDKI 1070


>gi|42409127|dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group]
 gi|42409258|dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa
           Japonica Group]
 gi|125538000|gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 22/413 (5%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
           +L PI+D  V +L  +   QV T  G     +LRI+R G+ I+E A   L      +W++
Sbjct: 417 SLMPIMDMRVANLFDEETPQVFTACGRGPRSTLRILRPGLAISEMARSMLPAEPIAVWTV 476

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + + +D FD ++VVSF + T +L++   + +EE     F   T +L       + L+QV 
Sbjct: 477 KKNINDMFDAYIVVSFANVTLVLSIG--ETIEEVSDSQFLDTTHSLAVSLLGEDSLMQVH 534

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVK 210
              +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   G L EV+
Sbjct: 535 PNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVE 592

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPR 269
              +  +++CL I P+ E    S+  AVG + D ++RI S+ PD  L           P 
Sbjct: 593 KQDMSGDVACLAIAPVPEGRQRSRFLAVGSF-DNTIRILSVDPDDCLQPLSVQSVSSAPE 651

Query: 270 SVLLCAFEGIS------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
           S++    +               +L   L +G L    ++M TG+L+D +   LG +P  
Sbjct: 652 SLMFLEVQASVGGEDGADHPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPK 711

Query: 318 LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG 377
           L      +   +   S RP + Y      L + ++   +     F+S    + +      
Sbjct: 712 LFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGD 771

Query: 378 ELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 428
            L I TI+ + +  +  +IPL   PR+     + +  A+  S K    AEE E
Sbjct: 772 ALRIFTIEHLGETFNETAIPLRYTPRKFVILPKKKYLAVIESDKGALSAEERE 824



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVL---PEENEPTKG 487
            +R+LD ++ +      L   E   SI + +F D +      VGTA  L   P+ N  + G
Sbjct: 883  IRILDPKSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTAKGLQFWPKRNL-SAG 941

Query: 488  RILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
             I ++  V++G+ L+L+ + + +    +L  F G+LLA +   ++LY     D G R+L 
Sbjct: 942  FIHIYKFVDEGRSLELLHKTQVEEVPLALCQFQGRLLAGVGSVLRLY-----DLGKRKLL 996

Query: 546  SECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   
Sbjct: 997  RKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAANH 1056

Query: 605  LDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLG 646
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+G
Sbjct: 1057 IDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVG 1116

Query: 647  EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKV 705
            + V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+ 
Sbjct: 1117 DVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQE 1169

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
               + G +H  +RS          K+ +DGDL E F  L      +I+  ++ +  E+ K
Sbjct: 1170 HPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPSLPADMQRKIADELDRTPGEILK 1224

Query: 766  RVEEL 770
            ++E++
Sbjct: 1225 KLEDI 1229


>gi|380488197|emb|CCF37544.1| hypothetical protein CH063_08850 [Colletotrichum higginsianum]
          Length = 271

 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 16/268 (5%)

Query: 520 KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
           KL+A +++ + +Y++      +  L+           + +   G+ I + DLM+S++L+ 
Sbjct: 7   KLVAGLSKTVVVYEYAEESSTSGALRKLATFRPSTFPVDIDVNGNMIGIADLMQSMTLVE 66

Query: 580 Y----KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
           +       +  + ERAR +   W ++V  L+   +L A+   NL  +R+N +  T+ ++ 
Sbjct: 67  FIPAQDGNKAKLVERARHFQYIWATSVCHLEGHSWLEADAQGNLMVLRRNPDAPTEHDQK 126

Query: 636 RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 695
           ++EV  E+HLGE VN+ R   +    P+ +   +P     TV G + V A +  E    L
Sbjct: 127 QMEVTSEFHLGEQVNKIRPLDIT---PNENDPIVPKAFLATVEGSLYVFADIKSEYQSLL 183

Query: 696 EKLQTNLRKVIKGVG--------GLNHEQWRSFNNEKKTVDAK-NFLDGDLIESFLDLSR 746
            + Q  L  V+K +G        GL+   WR F N K+  D    F+DG+LIE FLDL  
Sbjct: 184 LQFQERLADVVKTLGQAGGDSTSGLSFMAWRGFRNAKRAADGPFRFVDGELIERFLDLDE 243

Query: 747 TRMDEISKTMNVSVEELCKRVEELTRLH 774
            + + + + +  +VE +   VEEL R+H
Sbjct: 244 AKQEAVVQGLGPTVENMRNLVEELKRMH 271


>gi|156084934|ref|XP_001609950.1| splicing factor 3b, subunit 3, 130kD [Babesia bovis T2Bo]
 gi|154797202|gb|EDO06382.1| splicing factor 3b, subunit 3, 130kD, putative [Babesia bovis]
          Length = 1169

 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 17/323 (5%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG 84
           +++++   +L  I D  V+D++  GQ Q+    G  +  +LR++R+G+ + E A  EL G
Sbjct: 395 LQLVDELSSLSAITDLKVIDVQGLGQQQIFLGCGKGERSTLRVLRHGLSVEELADNELPG 454

Query: 85  -IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAI 143
             K +W++ +  D  +D F++V F  E   L +++ + +EE     F +   TL      
Sbjct: 455 RPKQVWTVPTGVDSIYDGFILVGF--EGNTLVLSVGEAVEEVTDSCFLTSITTLHVSMMG 512

Query: 144 YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
               +QV  G VR V         EWK+P    V VA +N  Q++LA  GG LVY E+ +
Sbjct: 513 DGSYIQVHDGGVRHVYDMKVR---EWKTPTAKRVKVAASNQHQLVLALSGGELVYFELDE 569

Query: 204 G-ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEH 261
              L EV    L  EI+CL + P  +    +   +VG   ++ VR+ SL   L   + + 
Sbjct: 570 SHTLVEVAKRSLNVEITCLSLQPTAKGRLMANFMSVGALDNL-VRVLSLDRQLKQYSTQL 628

Query: 262 LGGEIIPRSVLLCAFE----GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
           L     P SV +  F+     +  L+  L  G ++   ++  +G L+D+    LG++ + 
Sbjct: 629 LPNNSTPESVCIAEFQIGTHPVLMLVVGLNTGVMIRATIDAVSGALSDQYTRFLGSRAVK 688

Query: 318 LRTFSSKNTTHVFAASDRPTVIY 340
            +   ++    V   SDRP ++Y
Sbjct: 689 FKYIKNQ----VIGTSDRPWLLY 707



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 22/277 (7%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            +++L+      G V +   + G+LLA++ ++I+LY    +    +     C  HG I   
Sbjct: 906  EIRLLHVTRVGGVVRAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHRTCSDHGFI--- 962

Query: 558  YVQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            ++   G  I  GD+ + I +L    Y  E    E         W+++   LD    +  +
Sbjct: 963  WLNAVGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIAGD 1022

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
               ++F  R   E +T     +LE V ++HLG+        +L              V++
Sbjct: 1023 KFDSIFVTRVPQEEST--RHIQLENVCQFHLGDLPTAMDKAALSQ--------STHVVLY 1072

Query: 675  GTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
            GTV G IG +     +  L FL+ L+  +      + G  H  +RS+      V  +  +
Sbjct: 1073 GTVMGSIGALVPFQSKDELDFLQHLEMLMATEAPPLCGREHSFYRSY-----YVPVQQVV 1127

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGDL E F  L+  +  ++++ ++ +V  + ++++++
Sbjct: 1128 DGDLCEQFRHLTEAQQRKVAQQLDTTVNNVLRKLDDI 1164


>gi|167380951|ref|XP_001733297.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
 gi|165902459|gb|EDR28278.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
          Length = 349

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 133/235 (56%), Gaps = 5/235 (2%)

Query: 543 ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY---KHEEGAIEERARDYNANWM 599
           +LQ +   +  ++ LYV+T G+ I+VGDLMKSIS+  +    + +  + E +RD+ A++ 
Sbjct: 114 KLQEKGSCNVKLIGLYVKTMGNKILVGDLMKSISVYSFDNNGNNKNCLNEVSRDFYASYT 173

Query: 600 SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
           +A+E +D++ YL +++N NL     NS G  + ER RL      H+GE +N    GS+  
Sbjct: 174 TAIEFVDENCYLSSDSNSNLLVFNTNSTG-NESERFRLNNCAHIHVGECINVMCKGSIAP 232

Query: 660 RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWR 718
                +  Q   ++FG V G IG I  +P+E Y  L K+Q  +   +KG V     ++W+
Sbjct: 233 THSTYETIQKKCILFGGVTGYIGGICEIPNEIYDILIKVQNQILLQMKGIVECTTPDEWK 292

Query: 719 SFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              ++ K + + N +DG+++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 293 KVIDDWKRMPSSNIIDGNIVESYLEMSKEKQCEIAHLSGVNEEQINDIIENMISL 347


>gi|302654421|ref|XP_003019018.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
 gi|291182708|gb|EFE38373.1| hypothetical protein TRV_07031 [Trichophyton verrucosum HKI 0517]
          Length = 802

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 168/369 (45%), Gaps = 35/369 (9%)

Query: 5   YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
           Y  P+    LNL           +E   +L P++   + ++  +   Q+ T  G     S
Sbjct: 402 YFRPRPAENLNL-----------VESIASLNPLMAASIANITEEDAPQIYTLCGTSARSS 450

Query: 65  LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            R +++G+ ++E    EL  +   +W+ + S +D FD ++V+SF + T +L++   + +E
Sbjct: 451 FRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
           E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 509 EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 566

Query: 184 ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567 ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRGRSSFLAVGC- 625

Query: 242 TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
            D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626 DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
           +L+  TGEL+D +   LG +P+ L + S K    V A S R          L YS+V  K
Sbjct: 686 VLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSR--------SWLGYSDVQTK 737

Query: 355 EVSHMCPFN 363
             + + P N
Sbjct: 738 SFT-LTPLN 745


>gi|449296290|gb|EMC92310.1| hypothetical protein BAUCODRAFT_151722 [Baudoinia compniacensis UAMH
            10762]
          Length = 1224

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 170/808 (21%), Positives = 338/808 (41%), Gaps = 96/808 (11%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P+ L   +L  D  G           L P++   V +L  +   Q+    G      
Sbjct: 415  YFTPRGLTFTSLAYDVPG-----------LNPLMRTKVDNLTGEDAPQIYAIQGTGNSSV 463

Query: 65   LRIVRNGIGINEQASVELQGIK--GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
            L+ +R+G+ INE  S  L  ++   +WSL+    D + ++L++S     + + +++ DE+
Sbjct: 464  LKTMRHGLEINEIVSSPLGNLQYDNLWSLKHRAVDDYHSYLLLSSGYGDKTIVLSIGDEV 523

Query: 123  EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
            E  E   F +   T+  +      LVQV +  +  +S       NEW +P   ++  A++
Sbjct: 524  ETMENSPFLTNRATITANQMGDATLVQVHARGI--LSVLESGALNEWPAPAHRTIVAASS 581

Query: 183  NASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAAVGM 240
            N  Q+LL      L +  +G DG+L +++   ++  +I+ L +         ++ A VG 
Sbjct: 582  NDRQLLLGLSSSELAFFFMGDDGVLNQLEEMPEMSGKITALSVGQTPRGQQQAKYAVVGC 641

Query: 241  WTDISVRIFSLP-DLNLITKEHLGGEIIPRSVLLCAFEG------ISYLLCALGDGHLLN 293
              D ++R++S+  +  L  +       +P S+ +           ++Y+   L  G  L 
Sbjct: 642  -DDCTIRVYSIELETALEPRSVQALSAVPTSIEVVEMLDPSSNVLVNYVHIGLQSGLYLR 700

Query: 294  FLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 353
             +++  TGEL + +   LG +P  +          + A+S RP + Y++      + +  
Sbjct: 701  AVIDDVTGELGEVRTRFLGARPTRIFPVEIAEEQGIVASSSRPWLGYNNKGTYTLTPLVT 760

Query: 354  KEVSHMCPFNSAAFPDSLAIAKEGEL--TIGTIDDIQKLHIRSIPLGEHPRRICHQEQSR 411
             +V    PF +       A+  +  L  T+ T D   +L    + L   PR +     S 
Sbjct: 761  GQVEAARPFVTEHLRGFCAVQGQSLLIFTLPTTDG--RLSSSEVGLKYTPRAMTRHPYSP 818

Query: 412  TFAICSLKNQSCAE---------------------------ESEMHFVRLLD--DQTFEF 442
             + +      + A+                            S  H+   +   D  F  
Sbjct: 819  VWYVAQSDGNTLAQGTKDQLLSADGAMNGVDEDVSKQLGLSRSAGHWASCIQAVDPIFAK 878

Query: 443  ISTYPLDTFEYGCSILSCSF----SDDSNVYYCVGTAYVL----PEENEPTKGRILVF-I 493
             +T+ ++ F    + L C+     S +  VY  VGT   L      + +  +G + ++ +
Sbjct: 879  AATHTIE-FTDNEAALCCAAVPFESKNWEVYLAVGTGQHLRPGVSAKGQAPRGYVHIYKL 937

Query: 494  VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 552
            +EDG+ ++L+ +      +Y+++AF G+L   +   + LY     D G + L  +    G
Sbjct: 938  LEDGRNMELVHKTPFDAPIYAVHAFQGRLALGVGADLFLY-----DVGLKSLLRKS--RG 990

Query: 553  HILA---LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
             ++A     + +RG+ ++  D+ +SI+ +++K +   +     D    W +   ++D + 
Sbjct: 991  TVVANTITSIDSRGNRLICADVSESITYVVFKPKHNRMIGFVDDVIQRWTTTAAMIDYET 1050

Query: 610  YLGAENNFNLFTVR--KNSEGATDEERGRLEVVGEY-HLG------EFVNRFRHGSLVMR 660
              G +   NL+ VR  + +   +DEE     +V E  +LG      E  + F    + M 
Sbjct: 1051 SAGGDKFGNLWVVRCPEQASKESDEEGLGGYIVNERSYLGGAPYRLELRSHFFTQDIPMS 1110

Query: 661  LPDSDV--GQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
            +  + +  G    + +  + G +G++   +  E   F  +L+T +R     + G +H  +
Sbjct: 1111 IQRTALVAGGQEVLFWSGLQGTLGMLVPFVSREDVEFFTQLETLIRAEEPPLAGRDHLMY 1170

Query: 718  RSFNNEKKTVDAKNFLDGDLIESFLDLS 745
            RS+      V  K  +DGDL E F+ LS
Sbjct: 1171 RSY-----YVPVKGVIDGDLCERFMKLS 1193


>gi|453087531|gb|EMF15572.1| splicing factor 3B subunit 3 [Mycosphaerella populorum SO2202]
          Length = 1223

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 182/838 (21%), Positives = 337/838 (40%), Gaps = 107/838 (12%)

Query: 5    YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
            Y  P++L   +L  D  G           L P++   V +L  +   Q+    G      
Sbjct: 415  YFKPRELTMTHLAVDVPG-----------LHPLMKTRVDNLTGEDAPQIYGIQGKGNRSQ 463

Query: 65   LRIVRNGIGI-----NEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLE 119
             + +R+G+ +     N   +V    I   W+ +  T D    +L++S       +A ++ 
Sbjct: 464  FKTIRHGLDVEVLINNSMGNVPYDNI---WTFKHRTTDEHHRYLLLSSNYGDLTIACSIG 520

Query: 120  DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 179
            D +E+ E   F     T+         LVQV +  +R +    +   NEW +P   +  V
Sbjct: 521  DSVEQIENSNFLENRATVHAEQMGDAVLVQVHARGIRSIYQDGK--LNEWNTPAHRTCVV 578

Query: 180  ATANASQVLLATGGGHLVYLEIG-DGILTEVKH-AQLEYEISCLDINPIGENPSYSQIAA 237
            A+AN  Q+LL      L +  +G D IL +++   ++  +I+ + +    +    ++ A 
Sbjct: 579  ASANQRQLLLGLSSAELCFFWMGEDEILVQLEEMPEMSGKITAISVGSTPKGRQQAKYAV 638

Query: 238  VGMWTDISVRIFSLP-DLNLITKEHLGGEIIPRSV----LLCAFEGISYLLCALG--DGH 290
            VG   D ++R+ S+  D  L  +       +P S+    +L    G +  +  +G   G 
Sbjct: 639  VGC-DDCTIRVLSIELDSPLEARSVQALSAVPTSLEVVEMLDPASGTTVNVVHIGLQSGL 697

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSN 350
             L  +++  TGEL D +   LGT+   L     ++   V A S RP V Y+  +   Y+ 
Sbjct: 698  YLRAIIDETTGELGDVRTKFLGTKAPRLCPVQVEDEECVLACSTRPWVGYNHPQTGQYTI 757

Query: 351  VNLKEVSHMCPFNSAAFPD--SLAIAKEGELTIGTIDDIQ-KLHIRSIPLGEHPRRIC-H 406
              L     M    S   PD   L   +   L I  +  ++ +L   S+ L   PR +  H
Sbjct: 758  TPLI-AEKMEAARSFISPDLSGLCAIQGSSLLIFQLPSVEGRLSHSSVQLNNTPRGMARH 816

Query: 407  QEQSRTFAICSLKNQ-SCAEESEMHFVRLLDDQTFEFISTY------------------P 447
                  + + S  N  S A   ++    + DD+    +  +                  P
Sbjct: 817  PYYQIWYTVQSDGNTLSKATRDQLRGSPIDDDEEAMALERHLGLPRGNTHWASCIQAIDP 876

Query: 448  LD------TFEYG------CSILSCSFSDDSNVYYCVGTA-YVLPEENEPTKGRILVF-I 493
            ++      T E G      C       S +  V+  VGT  ++ P       G + +F +
Sbjct: 877  INRQAVVSTVEMGDNEAALCCACVAFESRNWEVFLAVGTGQHMSPGTGLQAAGYVHIFKL 936

Query: 494  VEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHH 551
             EDG KL  + + +    VY+L  F+G+L   +  ++ +Y     D G + L  +  G  
Sbjct: 937  EEDGTKLTFVHKTKFDQPVYALLPFHGRLALGVGNELFIY-----DIGQKALLRKARGQA 991

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
                 + +++ G  I+ GD+ + ++ ++YK     +     D    W +   ++D +   
Sbjct: 992  TPNQIVSLESHGQRIICGDVSEGVTYMVYKPGYNRLIPFVDDVVQRWTTGTTMIDYETTA 1051

Query: 612  GAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYHLGEFVNRFR 653
            G +   NL+ VR   + S+ A +E  G               RL++   Y+  +     +
Sbjct: 1052 GGDKFGNLWVVRCPEQPSQEADEEGAGGFIMNERSYLGGAPYRLDLRAHYYCQDIPMSLQ 1111

Query: 654  HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHEQYLFLEKLQTNLRKVIKGVGGL 712
              +LV        G    + +  + G +G++   +  E   F   L+  LR     + G 
Sbjct: 1112 RTALV-------AGGQEVLFWSGLQGTLGMLVPFVTREDVEFFTSLEQQLRIEDPPLAGR 1164

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +H  +RS+      V  K  +DGDL E F+ LS     +++  ++ SV+E+ K+V+E+
Sbjct: 1165 DHLMYRSY-----YVPVKGVIDGDLCERFMALSYDSKQKVAAEVDRSVKEIEKKVQEM 1217


>gi|302504587|ref|XP_003014252.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
 gi|291177820|gb|EFE33612.1| hypothetical protein ARB_07557 [Arthroderma benhamiae CBS 112371]
          Length = 762

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 168/369 (45%), Gaps = 35/369 (9%)

Query: 5   YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
           Y  P+    LNL           +E   +L P++   + ++  +   Q+ T  G     S
Sbjct: 402 YFRPRPAENLNL-----------VESIASLNPLMAASIANITEEDAPQIYTLCGTGARSS 450

Query: 65  LRIVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            R +++G+ ++E    EL  +   +W+ + S +D FD ++V+SF + T +L++   + +E
Sbjct: 451 FRTLKHGLEVSEIVESELPSVPSAVWTTKLSRNDQFDAYIVLSFSNGTLVLSIG--ETVE 508

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
           E    GF S   TL       + L+QV    +R + +  R   NEW +P   S+  AT N
Sbjct: 509 EVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGIRHIHADQR--VNEWPAPQHRSIVAATTN 566

Query: 184 ASQVLLATGGGHLVYLEIG-DGILTEV-KHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             QV +A   G +VY E+  DG L E  +  Q+   ++CL +  + E    S   AVG  
Sbjct: 567 ERQVAIALSSGEIVYFEMDTDGSLAEYDEKRQMSGTVTCLSLGEVPEGRVRSSFLAVGC- 625

Query: 242 TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGIS-----YLLCALGDGHLLNF 294
            D +VRI SL PD  L  K        P ++ ++   +  S     YL   L  G  L  
Sbjct: 626 DDSTVRILSLDPDSTLENKSVQALTSAPSALSIMSMIDSTSGGSTLYLHIGLYSGIYLRT 685

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK 354
           +L+  TGEL+D +   LG +P+ L + S K    V A S R          L YS+V  K
Sbjct: 686 VLDEVTGELSDTRTRFLGVKPVKLFSVSVKEQRAVLALSSR--------SWLGYSDVQTK 737

Query: 355 EVSHMCPFN 363
             + + P N
Sbjct: 738 SFT-LTPLN 745


>gi|326432370|gb|EGD77940.1| splicing factor 3b subunit 3 [Salpingoeca sp. ATCC 50818]
          Length = 1232

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 191/423 (45%), Gaps = 39/423 (9%)

Query: 5   YVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS 64
           Y  P+ L+ L L  D +           +L P++   + DL  +   Q+    G     S
Sbjct: 392 YFRPRDLLNLALVDDQE-----------SLHPMIACQLADLHEEETPQLYALCGRGAKSS 440

Query: 65  LRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            R++R+G+ ++E A  EL G    +WS++   DD  DT+LV+SF+ +T +L +   + +E
Sbjct: 441 FRVLRHGLEVSEVAVSELPGNPSAVWSVKRHVDDESDTYLVLSFVDKTLVLGIG--ETVE 498

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATAN 183
           E +  GF  +  TL       + L+QV  G +R +    R    EWK+P   ++     N
Sbjct: 499 EVKDSGFLEEVPTLSASRIGDDSLLQVYPGGIRHIRFDQR--VKEWKAPGSTAITNCAVN 556

Query: 184 ASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             QV++      LVY E+   G L E  +  ++  +++ + + P+ E+   SQ  A+G+ 
Sbjct: 557 ERQVVITLSSNELVYFELDRAGQLNEYTERIEMTSKVTAMALAPVAEDAFTSQFLALGL- 615

Query: 242 TDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFE--------GISYLLCALGDGH 290
            D +VR+ SL     L  +  + L G   P S  LC  E        G   L   L +G 
Sbjct: 616 EDNTVRVLSLDPSSCLQPLRMQALPGA--PSS--LCIIEIAGQAGEPGTLQLHIGLANGV 671

Query: 291 LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTV--IYSSNKKLLY 348
           +    ++  TG+L+D +   LG + + L    +     V A S RP +   Y    ++  
Sbjct: 672 VSRSTMDKVTGDLSDSRTRYLGVREVRLFPVRAHGHPAVLALSTRPWIAFTYQGQPRMAP 731

Query: 349 SNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRS-IPLGEHPRRICHQ 407
            +    E +HM  F S   P+ +    +  L I ++ ++  +  +S IPL   PR+    
Sbjct: 732 LSYEALEYAHM--FCSEQLPEGIVAVAKNTLRILSLQNLGSIFNQSTIPLAYTPRKFFLD 789

Query: 408 EQS 410
           E++
Sbjct: 790 EKT 792



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 491  VFIVEDG-----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
            +F   DG     KL  +   E +    +L  F G+L+A +   +++Y     D G ++L 
Sbjct: 939  LFSAPDGSARLTKLDFVHRTEVEAMPCALTPFAGRLIAGVGNIVRIY-----DMGRKKLL 993

Query: 546  SEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEI 604
             +C   H     + ++  G  +VV D  +S+  L YK  E  +     D    W +A+ +
Sbjct: 994  RKCENKHLPSRVVDIEVMGTRVVVADQRESVFFLKYKPTENVLSVFCDDTTPRWCTAMLM 1053

Query: 605  LDDDIYLGAENNFNLFTVRKNSEGATDE------------ERG-------RLEVVGEYHL 645
            +D      A + F   +V +  +  TD              RG       +L  V  +++
Sbjct: 1054 VDYSTVCVA-DKFGNVSVLRCPDDVTDTLQEDPSGAKAFWARGYLNGAPQKLVQVANFYI 1112

Query: 646  GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRK 704
            GE V      +L    P         + + T++G IG +    H E   F + L+ +LR+
Sbjct: 1113 GEIVQSLHKTTLT---PSG----TECIAYTTLSGSIGALMPFSHKEDAEFFQTLELHLRQ 1165

Query: 705  VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
                + G +H  +RS       V  K+ +DGDL E +  LS +   +I+  +  + +E+ 
Sbjct: 1166 EHPPICGRDHLAFRS-----AYVPCKSVIDGDLCEEYNMLSASLKSDIADGLERTPQEVA 1220

Query: 765  KRVEEL 770
            K++EE 
Sbjct: 1221 KKLEEF 1226


>gi|297829750|ref|XP_002882757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328597|gb|EFH59016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1384

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 242/549 (44%), Gaps = 96/549 (17%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
            N+ PI+DF V+D + + + Q+  C G  ++GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 465  NIAPILDFSVMDDQNEKRDQIFACCGVTREGSLRIIRSGINVEKLLKTAPVYQGITGTWT 524

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   TL C       LVQ+
Sbjct: 525  VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTLACGLVADGLLVQI 583

Query: 151  TSGSVRLVSSTSRELRNEWK-SPPGYS------VNVATANASQVLLATGGGHLVYLEIGD 203
               ++RL   T     +    S P +S      V+++     Q L+     +  +L I  
Sbjct: 584  HQDAIRLCMPTMDAHSDGIPVSSPFFSSWFPDNVSISLGAVGQNLIVVSTSNPCFLSIL- 642

Query: 204  GI---------LTEVKHAQLEYEISCLDI--------NPIGENPSYSQIAAV--GMWTDI 244
            G+         + E++   L+YE+SC+ +             +P  S  AA+  GM    
Sbjct: 643  GVKSVSSQCCEIYEIQRVTLQYEVSCISVPQKHIGKKRSCASSPDNSCKAAIPSGMEQGY 702

Query: 245  ---------SVRIFSLPD---------LNLITKEHLGGEI----IPRSVLLCAFEGISYL 282
                     SV + S  +           L++  +  G +    IP+ V L   + + Y+
Sbjct: 703  SFLIGTHKPSVEVLSFSEDGVGVRVLASGLVSLTNTMGAVISGCIPQDVRLVLVDQL-YV 761

Query: 283  LCALGDGHLLNF---LLNMKTG--------------ELTDRKKVSL------------GT 313
            L  L +G LL F   L +  +G              ++   KK +L            G 
Sbjct: 762  LSGLRNGMLLRFEWPLFSNASGLNCPDYFSYCKEEMDIVVGKKDNLPINLLLIATRRIGI 821

Query: 314  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
             P+ L  FS    + + A SDRP ++ ++ + L Y++++ +  +H  P  S+  P  +  
Sbjct: 822  TPVFLVPFSDSLDSDIIALSDRPWLLQTARQSLSYTSISFQPSTHATPVCSSECPQGILF 881

Query: 374  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK-NQSCAEESEMHFV 432
              E  L +  +   ++ + +   LG  PR++ +  +S+   +       +C  +     +
Sbjct: 882  VSENCLHLVEMVHSKRRNAQKFHLGGTPRKVIYHSESKLLIVMRTDLYDTCTSD-----I 936

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-ENEPTK 486
              +D  +   +S+Y L   E G S+      ++  +   VGT+      +LP  E E TK
Sbjct: 937  CCVDPLSGSVLSSYKLKPGETGKSMELVRVGNEHVLV--VGTSLSSGPAILPSGEAESTK 994

Query: 487  GRILVFIVE 495
            GR+++  +E
Sbjct: 995  GRLIILCLE 1003



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 18/146 (12%)

Query: 620  FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI---------- 669
            F+ R + E ++ E    L     Y++GE     + G  + +LP  DV +           
Sbjct: 1204 FSPRDDPEYSSPESNLNLNCA--YYMGEIAMAIKKGCNIYKLPADDVLRSYGLSKSIDTA 1261

Query: 670  -PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKT 726
              T+I GT+ G I V A +  E+Y  LE +Q  L    +   V G +H ++R   N  + 
Sbjct: 1262 DDTIIAGTLLGSIFVFAPISSEEYELLEAVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ- 1320

Query: 727  VDAKNFLDGDLIESFLDLSRTRMDEI 752
              A   LDGD++  FL+L+  + + +
Sbjct: 1321 --ATKILDGDMLAQFLELTNRQQESV 1344


>gi|237837399|ref|XP_002367997.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|211965661|gb|EEB00857.1| splicing factor 3B subunit 3, putative [Toxoplasma gondii ME49]
 gi|221488748|gb|EEE26962.1| splicing factor 3B subunit, putative [Toxoplasma gondii GT1]
 gi|221509241|gb|EEE34810.1| splicing factor 3B subunit, putative [Toxoplasma gondii VEG]
          Length = 1233

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 37/414 (8%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L PI D  V+D +  G  QV    G     +LRI+++G+G+ E A  EL G  + +W+ 
Sbjct: 401 SLSPITDLKVLDAQGTGAPQVYVLCGKGPRSTLRILQHGLGVEEMADNELPGRARAVWTT 460

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + S  + FD ++ V+F   +  L + + D +EE     F +   +L       +  +QV 
Sbjct: 461 KLSHQNAFDGYIFVAFDGSS--LVLQIGDTVEEVTDSAFLTNVSSLLVALMYDDSFIQVH 518

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK 210
              +R +  + R   NEW++P G  +  A AN  Q++++  GG LV  E+ D   L E  
Sbjct: 519 ETGIRHILKSKRV--NEWRAPGGRRIKAAAANERQLVISLAGGELVLFEVDDAHTLVETA 576

Query: 211 HAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNL--ITKEHLGGEII 267
              +  E +C+ +  I +    +   AVG   D  VRI SL  D NL  ++ + L  +  
Sbjct: 577 RRNINVESTCMSMQAIPKGRLRASFLAVG-GLDNMVRILSLEKDRNLRQLSTQLLPNDAT 635

Query: 268 PRSVLLCAFEGIS---------------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
           P SV L    G+                YL   L  G ++  +++   G L D++   LG
Sbjct: 636 PESVCLATLTGLGANSTDAGKSQDNGVLYLHVGLNTGVMIRSVVDPVLGTLLDQRSRFLG 695

Query: 313 TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            + +     + +    + A S++  + Y+   KL    +N   +  +  F S    D   
Sbjct: 696 GRAVRFHAVTLQGQPAILALSEKSWLCYTFQHKLHCIPLNYDPLECVASFCSEQCTDGFV 755

Query: 373 IAKEGELTIGTIDDIQKLHIRSI-PLGEHPRRICHQEQSRTFAICSLKNQSCAE 425
               G L I     + +   +++ PL   PR           A+ +L + S AE
Sbjct: 756 AIAGGSLRIFRCQRLGETFGQTVLPLSFTPR-----------AMAALPHPSAAE 798



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 148/340 (43%), Gaps = 44/340 (12%)

Query: 456  SILSCSFSDDSNV-YYCVGT--AYVLPEENEPTKGRILVFIVEDG-KLQLIAEKETKGAV 511
            + LSC F +   +    VGT  A  L  +  P    I VF  +D   L L+     +   
Sbjct: 908  AALSCCFCEMEGLPLLVVGTVTAMTLKPKKVP-HASIKVFSYDDKFSLSLVHSTPVEDYP 966

Query: 512  YSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGD 570
             +L AF G LLA +  K++LY       G + L  +C +      + +++  GD + VGD
Sbjct: 967  MALTAFRGMLLAGVGHKLRLYAL-----GRKRLLKKCEYKNLPCGVAFIRVAGDRLFVGD 1021

Query: 571  LMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            + +S+ ++ Y+  E      A D    W++  E+LD   ++ A+   ++F  R  SE   
Sbjct: 1022 VRESVHVMRYRLSENLFYVLADDVVPRWLTKGEVLDYHTFVAADKFDSVFICRVPSEAKE 1081

Query: 631  DE--------ERG----------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 672
            DE         RG          +L+ +  +H+GE V      +L     +S       +
Sbjct: 1082 DELGDTTGLRLRGDTTYLTDKCFKLQSLLHFHIGEIVTALERATLTSAASES-------I 1134

Query: 673  IFGTVNGVIGVIASL--PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
            ++GT+ G IG  +     HE  LF   L+  +R     + G  H  +RS+ +      AK
Sbjct: 1135 VYGTIMGSIGSFSPFLTKHELDLFTH-LEMVMRSEKPPLAGREHIMFRSYYHP-----AK 1188

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N +DGDL ES+  L       I++    +  ++ K +E++
Sbjct: 1189 NTVDGDLCESYALLPYEDQKRIAQDFEKTPADILKHLEDI 1228


>gi|429328598|gb|AFZ80358.1| hypothetical protein BEWA_032110 [Babesia equi]
          Length = 1387

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 186/927 (20%), Positives = 356/927 (38%), Gaps = 190/927 (20%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            NLGPI DF   +    G   V+ C G    G    +  G+GI+   S  + GI  ++S+ 
Sbjct: 464  NLGPIADFTYGEENSHGNKSVLACCGMGSAGKFCSITLGVGIDTICSNTILGISNLFSVS 523

Query: 93   S--STDDPFDTFLVVSFISETRILAMNLED-------------ELEETEI---------- 127
            S  S  D  ++ L  SF   T+  ++N                ++ E  +          
Sbjct: 524  SGGSKTDSNESILCCSFYRNTQFYSVNFVSMNNTQGNINSSLLDINEPNVGYVNKMVMDG 583

Query: 128  EGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGY--SVNVATANAS 185
              F    +T+   +   +++VQ+T+ S+ ++SS  +  R  +K+       ++  +   +
Sbjct: 584  STFREDERTILLSNIDKDKIVQITTSSIIILSSNPKLNRIAYKTVEEIMTEIDEGSEERN 643

Query: 186  QVLLATGGGHLVYLEIGD---GILTEVKHAQLEYEISCLDINP---IGENPSYSQIAAVG 239
            +++ A   G  +++ + +    IL   K   +  E   ++I+    I    + ++  A+ 
Sbjct: 644  RIVHACLCGSYIFIILSNHWAAILDGKKLEMVNVEPLSINISSVAYISHVKNSAEFLALS 703

Query: 240  MWTDISVRIFSLPDLNLITKEHLGGE--IIPRSVLLCAFEGISYLLCALGDGHLLNFLLN 297
             W   S+ I S P+L+++ +  +     I  +S+   A     +   +L DG L+ + + 
Sbjct: 704  TWEKSSILILSFPNLDIVRRIKIECTFGIYIKSMKFGATNNNLFFFVSLSDGQLMVYKVQ 763

Query: 298  MK-------TGELTDRKKVSLGTQPITLRTFSSKNT-----------------------T 327
            M        +   +D  K  +    I   T    NT                        
Sbjct: 764  MSRNITNAVSKGKSDVFKNDVEIDFILDSTMHLSNTCTKLEFLNLSNNYIHEQTCNLDCN 823

Query: 328  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF----NSAAFPDSL-AIAKEGELTIG 382
            ++ A   + T I+S   K+ ++ VN+  VS +C       S+ F   L A      L IG
Sbjct: 824  NIIAIGKQSTAIFSKRDKVEFAKVNISHVSCLCTIPTQRTSSEFNSVLIAYYSYPSLVIG 883

Query: 383  TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 442
             +D I++ H+++I  G    ++C+   S+   +      S      +  +  +DD    F
Sbjct: 884  KLDPIEQFHVQNIISGRTFDKVCYHVPSKVAVVGCPPELSATTSDSVPGLNDIDDNNPPF 943

Query: 443  IS----------------------------TYPLD-TFEYGCSILSCSFSDDSNVYYCVG 473
            +                              Y L+   E+  S L     D +N    +G
Sbjct: 944  MCLDGSESEKVNSLKLPALALFINVSSKEVIYNLNLPREHLVSSLHTMSFDGTNEVILIG 1003

Query: 474  TAYVLPEENEPTKGRILVFIVE-----DGKLQLIAEKETK---GAVYSLNAFNGKLLAAI 525
            T+ V    + PT+G   ++IV+     + +L +  ++ TK   G V  + +     + A+
Sbjct: 1004 TSKVDESHDAPTEG--FLYIVDISSHSEDRLVMTIQRTTKPFAGGVVEITSCGQNPVIAV 1061

Query: 526  NQKIQL-------------------YKWMLRD--DGTRELQSECGHHGHILALYVQTRGD 564
            N  +                     Y +   D  D  + L  E  +  +   + + +  +
Sbjct: 1062 NNVVLALSLCSNIGVRNEKDRYDLEYLYACDDIIDSRQCLVVEAKYTSNTYVVSLDSCEN 1121

Query: 565  FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRK 624
             I+VGDLM S  LL +K  +    E  RD+N+ W +AV  +D +  + ++++ N     K
Sbjct: 1122 NIIVGDLMTSAKLLRFK--DNCFYELCRDFNSIWCTAVASIDKNTSIVSDDSGNFSIFSK 1179

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVNRF-----------RHGSLVMR------------- 660
            N     D +  + +V+G +H GE +N+            R  SL+               
Sbjct: 1180 NETPTNDAQSAKFQVMGLFHHGEIINKIVEHVSKECKYERKKSLIKLGGVASSCKRNFCC 1239

Query: 661  LPDSDVGQI-----------------------PTVIFGTVNGVIGVIASLPH-EQYLFLE 696
            L  +D   +                        T +  T +G I  +++    + +L L 
Sbjct: 1240 LSTADTCPMDPTNGSKSTNIHKDAAPTRYRFDKTYLCATSSGSILKMSTFKDMDAFLRLA 1299

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFL----DLSRT---RM 749
             L+  +  +    G + + +WR+F N    +  + F+DGD +ESFL    DL R    ++
Sbjct: 1300 LLEEAIIGIQSDAGNIPNSKWRNFQNSHTNIQTRGFIDGDTVESFLHLPMDLKRRVLEKL 1359

Query: 750  DEISKTMN---VSVEELCKRVEELTRL 773
             E SK +     S+E L   +E++ R+
Sbjct: 1360 QESSKDIQGDFDSIETLTLEIEQIQRV 1386


>gi|407416557|gb|EKF37684.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi
            marinkellei]
          Length = 1276

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 183/819 (22%), Positives = 317/819 (38%), Gaps = 147/819 (17%)

Query: 33   NLGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL 91
            N GP+ D  + VD  R G   V+  +G    G + + R+ +     A+++   +  +  L
Sbjct: 427  NCGPVFDLTIAVDGPRMG---VIASTGVGMGGGVSLQRSAVNFRHDAAID--KLLNVTRL 481

Query: 92   RSSTDDPFDTFLVVSFISETRILA------MNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
             ++ D       ++SF   +R+        M    EL ET  +   S+      + +  N
Sbjct: 482  FAAGD-----IFIISFPGYSRVYQFQTTPNMTTIKELSETSFDK--SKETLSLVYLSERN 534

Query: 146  QLVQVTSGSVRLVSSTSRE---LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
              VQVTS  V +V          +NE      + +  A+ANA   LL       V + + 
Sbjct: 535  TFVQVTSVGVNVVKGGKGVYIICKNE------FGIQHASANAKLRLLVFSSSRFVSV-VD 587

Query: 203  DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
                      ++E E+SCL I       S SQ   +G W   +V ++ + D         
Sbjct: 588  LNTRNTRASLEVENEVSCLLI-------SSSQGFVIGEWNSGAVCLYEVQD--------- 631

Query: 263  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD-----------RKKVSL 311
             GEI+ +  + C+    S  +C L   +    ++ +  G + D            ++  +
Sbjct: 632  -GEILLKGRIFCSATSCS--MCILSHPYTPRLVVGLLNGYIADISLEAILMGGGARETLI 688

Query: 312  GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSL 371
              QP+ L    S N   V    + P +I   +     + ++  +V+ +C     +   S 
Sbjct: 689  RMQPVELFNLESHNA--VLCLGEVPLIIILCDTGFQLTGIDFNDVA-VCAIIECSHISSK 745

Query: 372  AI---AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ------- 421
             I     E  L  G I D++KL+   + L     R+ +      F I   +N+       
Sbjct: 746  YIFFSQSENSLAFGNIVDLKKLNSCFVGLKATVTRVKYIAWWNFFVISVRRNEKDQVFLL 805

Query: 422  -------SCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGT 474
                   S   ++E+  + LL+++   F  T  L     G +        D +    +GT
Sbjct: 806  MGHELANSWVPQNELVSIELLENERCVFFETVVLG----GSNESPDGNEADKDKAILLGT 861

Query: 475  AYVLPEENEPTKGRILVFIVEDGKL-------QLIAEKETKGAVYS---LNAFNGKLLAA 524
             +  P+E  P   R + + VE GKL       + I  K+ +GA+     +  + G++   
Sbjct: 862  TFAFPDEQLPRSSRFIWYSVEQGKLLSERPQLRQIGSKDVEGALQCCCIVPNYVGRIALG 921

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
            IN  I LY W   D      ++ C       +L ++ Q    ++V  D   S   +    
Sbjct: 922  INGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSCFFIQVDT 980

Query: 583  EEGAIEERARDYNANWM--SAVEILDD--DIYLGAENNFNLFTVRK---------NSEGA 629
             +G++E  ARD     +   AV  L +  DI  G ++ +N F + +         N+  A
Sbjct: 981  IQGSLEIVARDSEPRGVMDGAVFQLGNIYDICFG-DDYYNFFCLSRGATTLPSASNAISA 1039

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLV--------MRLPDSDVGQI--PTVIFGTVNG 679
            T    G+L+   +YHLG+ V   + GS          + +P + +  I  P V+FGT +G
Sbjct: 1040 TVSS-GKLKTRAQYHLGDMVTAMQLGSFAPCSVTNSAVPIPTTLIPGICGPQVVFGTSHG 1098

Query: 680  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-------------------- 719
              G I  + +E YLFL+ L+  +  V+  +GG  H  +R                     
Sbjct: 1099 AFGTITPVSNETYLFLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENVN 1158

Query: 720  ------FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
                  FN  +K   ++    GDLIESFL    +    I
Sbjct: 1159 VVSSEVFNKRRKRYLSRCVCSGDLIESFLTFPHSIQQRI 1197


>gi|297739782|emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 228/537 (42%), Gaps = 80/537 (14%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 462 NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 521

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 522 VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 580

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
               V+L   T          +  +   W  P   S+++     + +++AT     +++ 
Sbjct: 581 HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 639

Query: 201 IGDGI------LTEVKHAQLEYEISCLDI--NPIGENPSY--------SQIAAVGMWTDI 244
               +      + E++H +L+ E+SC+ I      + PS         S  AA+ +  +I
Sbjct: 640 GVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNI 699

Query: 245 -----------SVRIFS-LPD--LNLITK------EHLGGEI---IPRSVLLCAFEGISY 281
                      SV I S LPD  L ++          LG  +   +P+   L   +   Y
Sbjct: 700 GRIFVIGTHKPSVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRF-Y 758

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVS-------------------LGTQPITLRTFS 322
           +L  L +G LL F L   +   +                         +G  P+ L   S
Sbjct: 759 VLSGLRNGMLLRFELPAASMVFSSELSSHSPSTNINSPVNLQLIAIRRIGITPVFLVPLS 818

Query: 323 SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIG 382
                 + A SDRP ++ S+   L Y++++ +  +H+ P  S   P  +    E  L + 
Sbjct: 819 DSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMGILFVAENSLHLV 878

Query: 383 TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 442
            +   ++L+++   LG  PR++ +  +SR   +        ++++    +  +D  +   
Sbjct: 879 EMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTYSSDICCVDPLSGSV 935

Query: 443 ISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEPTKGRILVFIVE 495
           +S++ L+  E G S+      ++           G A +   E E TKGR++V  +E
Sbjct: 936 LSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTKGRLIVLCLE 992



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 17/203 (8%)

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE--NNFNLFTVR 623
            I VGD    +    Y  +   +E+   D     ++   ++D D  + ++   +  + +  
Sbjct: 1122 IAVGDCRDGVVFYSYHEDSRKLEQLYCDPEQRLVADCILMDVDTAVVSDRKGSIAVLSCS 1181

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV-----GQIPTVIF---- 674
             + E     E   L +   Y++GE     + GS   +LP  DV     G    + F    
Sbjct: 1182 NHLEDNASPE-CNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENS 1240

Query: 675  ---GTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDA 729
               GT+ G I ++  +  E++  LE +Q  L   ++   + G +H ++RS  N  +    
Sbjct: 1241 IMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHNEFRSRENSVRKAGV 1300

Query: 730  KNFLDGDLIESFLDLSRTRMDEI 752
               LDGD++  FL+L+  + + +
Sbjct: 1301 SKILDGDMLAQFLELTSMQQEAV 1323


>gi|170589359|ref|XP_001899441.1| Xeroderma Pigmentosum Group E Complementing protein [Brugia malayi]
 gi|158593654|gb|EDP32249.1| Xeroderma Pigmentosum Group E Complementing protein, putative
           [Brugia malayi]
          Length = 521

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 113/164 (68%), Gaps = 9/164 (5%)

Query: 10  QLIKLNLQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
           QLI+L+ +P A G+ Y+ +L+ Y NL PI D  V  +   GQ Q++TCSGAYKDG++RI+
Sbjct: 335 QLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRII 392

Query: 69  RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
           RNGIGI E ASVEL+GIK M++LR+  DD FD +L++SF SET +L +N E ELE+TEI 
Sbjct: 393 RNGIGIEELASVELKGIKNMFTLRTR-DDEFDDYLILSFDSETHVLLINGE-ELEDTEIT 450

Query: 129 GFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKS 171
           GF     TL+     +++ ++QVT G V L+   + ++   WKS
Sbjct: 451 GFTVDGATLWAGCLFHSKTILQVTHGEVILIDGDNIQV---WKS 491


>gi|149038189|gb|EDL92549.1| splicing factor 3b, subunit 3 (predicted) [Rattus norvegicus]
          Length = 650

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 146/655 (22%), Positives = 272/655 (41%), Gaps = 116/655 (17%)

Query: 210 KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP- 268
           +  ++  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P 
Sbjct: 12  ERKEMSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPA 68

Query: 269 RSVLLCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
           +   LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG
Sbjct: 69  QPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLG 128

Query: 313 TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
           ++P+ L     +    V A S R  + YS   +   + ++ + +     F S   P+ + 
Sbjct: 129 SRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIV 188

Query: 373 IAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLK 419
                 L I  ++ +  +  + + PL   PR+ + H E +            T A  + +
Sbjct: 189 AISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQR 248

Query: 420 NQSCAEE-------------SEM-------------------------HFVRLLDDQTFE 441
            Q  AEE             +EM                           +R+++     
Sbjct: 249 KQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGN 308

Query: 442 FISTYPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG- 497
            +    L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G 
Sbjct: 309 TLDLVQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGE 368

Query: 498 KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
           KL+ + +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A 
Sbjct: 369 KLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-AN 421

Query: 558 YV---QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
           Y+   QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+
Sbjct: 422 YISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGAD 481

Query: 615 NNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGS 656
              N+  VR   N+    DE         +RG L       EV+  YH+GE V   +  +
Sbjct: 482 KFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTT 541

Query: 657 LVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
           L+        G   ++++ T++G IG++     HE + F + ++ +LR     + G +H 
Sbjct: 542 LI-------PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHL 594

Query: 716 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +RS+         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 595 SFRSY-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 644


>gi|150863836|ref|XP_001382447.2| hypothetical protein PICST_54680 [Scheffersomyces stipitis CBS 6054]
 gi|149385092|gb|ABN64418.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 1228

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 182/842 (21%), Positives = 348/842 (41%), Gaps = 125/842 (14%)

Query: 27   VLERYVNLGPIVDFCVVDLERQGQG----QVVTCSGAYKDGSLRIVRNGIGINEQASVEL 82
            ++E + +L PI D  +V+    G      Q++T S       L+ + +GI  +   S  L
Sbjct: 408  LVEIFTSLSPITDAGIVESISSGTADSLQQMITASS---HSHLKSLVHGIQTSTLVSSPL 464

Query: 83   QGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 141
              I  G+ + +   D   D +LV+S    +R L +++ + +EE E   F +   TL    
Sbjct: 465  PIIPTGVLTTKLFADSRSDEYLVISSTVASRTLVLSIGEVVEEVENSQFVNDQPTLAVQQ 524

Query: 142  AIYNQLVQVTSGSVRLVSSTSRELR--------NEWKSPPGYSVNVATANASQVLLATGG 193
               + +VQ+ +  +R V  T  E +         +W  P G ++  A+ +  QV++A   
Sbjct: 525  VGTSSVVQIYTNGIRHVKHTRTEDKEQSISRKITDWYPPAGITIVNASTHREQVIIALSN 584

Query: 194  GHLVYLEIG--DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
              + Y E+   D  L E +  ++E   S   I    E  +   + AV   +D ++++ SL
Sbjct: 585  AEICYFEVDATDDQLIEYQD-RVEMSNSITSIAICEETANKKNLFAVVGCSDETIQVLSL 643

Query: 252  PDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALG--DGHLLNFLLNMKTGELTDRKKV 309
               N +    L   +   S  L   +  +  +  +G  +G  +   +   +G L+D +  
Sbjct: 644  QPHNCLETLSLQA-LSANSTSLSMLQNDNTTMVHIGMDNGLYVRTSIEEISGNLSDTRIK 702

Query: 310  SLGTQPITLRTFSSKN-TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS---- 364
             LG++P+TL      N +  + A S RP + Y +  +   + +   ++     F+S    
Sbjct: 703  YLGSKPVTLSVTKLPNGSKAILAISSRPWICYYNRSEFKVTPLLGVKILKGASFSSEDIG 762

Query: 365  ----AAFPDSLAIAKEGELTIGTID---DI-QKLHIRSIPLGEHPRRICHQEQSRT---- 412
                 A  D+  I      TIG  D   DI Q ++I  I L   PR++   +  ++    
Sbjct: 763  GEGIVALSDNNLIV----FTIGKEDVEFDINQDVNIEKIRLRYTPRKLIIDDDGKSSKVN 818

Query: 413  --------------FAICSLKNQSCAE-------------ESEM----HFVRLLDDQTFE 441
                          F+  +L ++   E             E+E+      ++++D +   
Sbjct: 819  YIYALQSEYGTKSPFSPSNLNSEDDPESEIDQDYYDAFGYETEVDKWASCIQVVDFENSS 878

Query: 442  FISTYPLDTFEYGCSILSCSF--SDDSNVYYCVGTAYVLPE--ENEPTKGRILVFIVEDG 497
             I T    + E   S+    F  S   N+ + +       +  +N   K  +  F ++  
Sbjct: 879  IIQTVEFSSNESAISMAKLHFVSSGKGNMEHLIIGVTTDRKFLKNSVGKSYLFTFKIQKN 938

Query: 498  -------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL----QS 546
                   +L+ + + E   +   +  FNG+LL  + + ++LY     D G R+L     +
Sbjct: 939  TRKSNKKRLEYLHKTEIDCSPTVMIPFNGRLLVGMGKYLRLY-----DIGHRQLLRKSST 993

Query: 547  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
               +   I+ L V T G+ I  GD   SI    +   E      A D     ++AV  LD
Sbjct: 994  NIDYISSIVDL-VHTGGERIAFGDSHSSIVFAKFDSAENRFVPFADDIMKRQITAVAALD 1052

Query: 607  DDIYLGAENNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVN 650
             D  +G +   N+F  R                K  E   +    R + + E+ L +   
Sbjct: 1053 YDTVIGGDKFGNVFVSRVPDSVSKKSDEDWSLLKVQESYLNASPSRTKNLCEFFLSDTPT 1112

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIK-G 708
             F  GS+        +G    +I+  + G +G++  L  +  + F+  L+ +LR+ +   
Sbjct: 1113 SFTKGSMT-------IGGHDGIIYTGIQGTVGLLLPLSTKSEVQFINSLEQSLRQQMGFN 1165

Query: 709  VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVE 768
            + G++H ++RS+ N       KN +DGDLIE + +LS++   +I++ +N + +E+ K++ 
Sbjct: 1166 LLGMDHLKFRSYYNP-----VKNVIDGDLIEKYYELSQSLKIKIARELNRTPKEVEKKIS 1220

Query: 769  EL 770
            +L
Sbjct: 1221 DL 1222


>gi|225441567|ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/551 (22%), Positives = 231/551 (41%), Gaps = 94/551 (17%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
            N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 462  NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 521

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 522  VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 580

Query: 151  TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
                V+L   T          +  +   W  P   S+++     + +++AT     +++ 
Sbjct: 581  HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 639

Query: 201  IGDGI------LTEVKHAQLEYEISCLDI--NPIGENPSY--------SQIAAVGMWTDI 244
                +      + E++H +L+ E+SC+ I      + PS         S  AA+ +  +I
Sbjct: 640  GVRSVSAYQYEIYEMQHVRLQNEVSCISIPHKHFDKKPSTFLSNLVDNSSAAALLIGVNI 699

Query: 245  -----------SVRIFS-LPD--LNLITK------EHLGGEI---IPRSVLLCAFEGISY 281
                       SV I S LPD  L ++          LG  +   +P+   L   +   Y
Sbjct: 700  GRIFVIGTHKPSVEILSFLPDEGLRILASGAISLTNTLGTAVSGCVPQDARLVLVDRF-Y 758

Query: 282  LLCALGDGHLLNFLLNMKT---------------------GELTDRKKVS---------- 310
            +L  L +G LL F L   +                      +    K ++          
Sbjct: 759  VLSGLRNGMLLRFELPAASMVFSSELSSHSPSVSSCSVNDADTNLSKNINSPVNLQLIAI 818

Query: 311  --LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
              +G  P+ L   S      + A SDRP ++ S+   L Y++++ +  +H+ P  S   P
Sbjct: 819  RRIGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECP 878

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESE 428
              +    E  L +  +   ++L+++   LG  PR++ +  +SR   +        ++++ 
Sbjct: 879  MGILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTY 935

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEP 484
               +  +D  +   +S++ L+  E G S+      ++           G A +   E E 
Sbjct: 936  SSDICCVDPLSGSVLSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAES 995

Query: 485  TKGRILVFIVE 495
            TKGR++V  +E
Sbjct: 996  TKGRLIVLCLE 1006



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 17/124 (13%)

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDV-----GQIPTVIF-------GTVNGVIGVIASLPHE 690
            Y++GE     + GS   +LP  DV     G    + F       GT+ G I ++  +  E
Sbjct: 1227 YYMGEIAMSIKKGSFSYKLPADDVLKGCDGSNTIIDFSENSIMAGTLLGSIIMLIPISRE 1286

Query: 691  QYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
            ++  LE +Q  L   ++   + G +H ++RS  N   +      LDGD++  FL+L+  +
Sbjct: 1287 EHELLEAVQARLAVHQLTAPILGNDHNEFRSREN---SAGVSKILDGDMLAQFLELTSMQ 1343

Query: 749  MDEI 752
             + +
Sbjct: 1344 QEAV 1347


>gi|294875343|ref|XP_002767276.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
 gi|239868839|gb|EEQ99993.1| spliceosome factor, putative [Perkinsus marinus ATCC 50983]
          Length = 1258

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 178/400 (44%), Gaps = 62/400 (15%)

Query: 33  NLGPIVDFCVVD--------LERQGQG-------------QVVTCSGAYKDGSLRIVRNG 71
           +L PI D  V+D        L+  G G             Q+   SG     +LRI+R+G
Sbjct: 394 SLAPITDMKVMDCFSTQTQVLQADGSGMQQTVTTGMSVGCQIYALSGRGPRSALRILRHG 453

Query: 72  IGINEQASVELQG-IKGMWSLRSSTDDPF--------------DTFLVVSFISETRILAM 116
           + + E  + EL G    +++++     PF              D ++VVSF+ +T  L +
Sbjct: 454 LTLGEAGASELPGQPNALFTIK-----PFGASYAPVAEGEVESDRYIVVSFVDQTLTLLV 508

Query: 117 NLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYS 176
              D + E    GF  +  TLF         +QV    +R V++  R    EW++PPG  
Sbjct: 509 T-SDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHVAAGRRT--TEWRAPPGRQ 565

Query: 177 VNVATANASQVLLATGGGHLVYLEIG---DGILTEVKHAQLEYEISCLDINPIGENPSYS 233
           V +A +N SQV++A  GG +   E+    +G L+EV    +  E++ L + P+    + S
Sbjct: 566 VTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEVAALTVQPLSSGRTRS 625

Query: 234 QIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAF-EGIS---YLLCALGD 288
           Q  AV    D SVR+ SL  D  L             SV +  F EG +   YL   L D
Sbjct: 626 QFMAVA-GVDSSVRVLSLDSDRPLRQLAAQALRTTASSVCMLQFGEGTTATIYLAIGLED 684

Query: 289 GHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIYSSNKKLL 347
           G L+  +++  TG+L+D+++  LG + +TL   +       + A S RP + + +N    
Sbjct: 685 GVLVRSVVDGVTGQLSDQRQRVLGPRRVTLCPITVDGGRPAMVAMSSRPFLCFQANDYSA 744

Query: 348 -------YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELT 380
                  Y  V L ++  +  F+ AA P S+   +EG  T
Sbjct: 745 AGASGGQYQCVPLTKIPALPRFDHAA-PFSIENCQEGICT 783



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/366 (22%), Positives = 159/366 (43%), Gaps = 41/366 (11%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD--DSNVYYCVGTAYVL----PEENEPT 485
            +R++D  T        LD  E   ++  C F    D+     VGTA  +    P  +   
Sbjct: 902  IRVVDPLTASTSFKLDLDVDEAATAMTVCYFYQLKDNRPCLVVGTATGVDPHNPSRSAHG 961

Query: 486  KGRILVFIVEDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM-LRDDGTRE 543
            K  I  ++ ++   LQLI     +G   ++  F G+LL A+     +   + + + G + 
Sbjct: 962  KCYIKTYLYDESYNLQLIHVTPLEGVPSAMYPFEGRLLVALRGSPTVAPVLRIYELGKKR 1021

Query: 544  LQSECGHH-----GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            L  +C +      G I+ L V    D I   D   SI +L +++ +  ++  + D     
Sbjct: 1022 LLKKCEYKFLPESGGIMWLDVNK--DRIFAADSRDSILVLRWRYSDNQMQVISDDTYPRC 1079

Query: 599  MSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGR-----------LEVVGEYHLGE 647
            ++A  +LD +  +  +   N+  +R   +       GR           ++++G +H+GE
Sbjct: 1080 ITAAAVLDYNTIVVGDKFDNIAVLRVPGDAKDAGAWGRDNDYASGNTFKMDLIGHFHVGE 1139

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE-QYLFLEKLQTNLRKVI 706
             +   +  ++V        G    VI+ TV G IG +     + ++ FL+ L+ ++R   
Sbjct: 1140 TITSLQRVTMV-------AGGAEIVIYSTVLGTIGALYPFSSKREHGFLQALEMHMRNTA 1192

Query: 707  --KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
                + G  H  +RSF +       KNF+D DL E +  L   +  +I+  M+ + +E+ 
Sbjct: 1193 ASPSLTGREHVMYRSFYHP-----IKNFVDADLCEVYYQLPAEKQRQIAVDMDKTPQEVM 1247

Query: 765  KRVEEL 770
            K++E++
Sbjct: 1248 KKLEDI 1253


>gi|119572189|gb|EAW51804.1| splicing factor 3b, subunit 3, 130kDa, isoform CRA_b [Homo sapiens]
          Length = 635

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 146/651 (22%), Positives = 270/651 (41%), Gaps = 116/651 (17%)

Query: 214 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP-RSVL 272
           +  ++ C+ +  +      S+  AVG+  D +VRI SL   + +  + L  + +P +   
Sbjct: 1   MSADVVCMSLANVPPGEQRSRFLAVGL-VDNTVRIISLDPSDCL--QPLSMQALPAQPES 57

Query: 273 LCAFE----------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
           LC  E                G  YL   L +G LL  +L+  TG+L+D +   LG++P+
Sbjct: 58  LCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPV 117

Query: 317 TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
            L     +    V A S R  + YS   +   + ++ + +     F S   P+ +     
Sbjct: 118 KLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAIST 177

Query: 377 GELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR-----------TFAICSLKNQSC 423
             L I  ++ +  +  + + PL   PR+ + H E +            T A  + + Q  
Sbjct: 178 NTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQM 237

Query: 424 AEE-------------SEM-------------------------HFVRLLDDQTFEFIST 445
           AEE             +EM                           +R+++      +  
Sbjct: 238 AEEMVEAAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDL 297

Query: 446 YPLDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQL 501
             L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ 
Sbjct: 298 VQLEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEF 357

Query: 502 IAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV-- 559
           + +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+  
Sbjct: 358 LHKTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISG 410

Query: 560 -QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 618
            QT G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N
Sbjct: 411 IQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGN 470

Query: 619 LFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMR 660
           +  VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+  
Sbjct: 471 ICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLI-- 528

Query: 661 LPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 719
                 G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS
Sbjct: 529 -----PGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRS 583

Query: 720 FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
           +         KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 584 Y-----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 629


>gi|414882040|tpg|DAA59171.1| TPA: hypothetical protein ZEAMMB73_269016 [Zea mays]
          Length = 690

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 196/447 (43%), Gaps = 23/447 (5%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QP A  + + + E   +L P++D  V +L  +   Q+ T  G     +LRI+R G+ I+
Sbjct: 248 FQPRALKNLMRIDE-IESLMPVMDMRVANLFDEETPQLFTACGRGPRSTLRILRPGLAIS 306

Query: 76  EQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           E A   L      +W+++ + +D FD ++VVSF + T +L++   + +EE     F   T
Sbjct: 307 EMARSMLPAEPIAVWTVKKNINDMFDAYIVVSFTNVTLVLSIG--ETIEEVSDSQFLDTT 364

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 365 HSLAVTLLGEDSLMQVHPNGIRHIREDGRV--NEWRTPGKKTITKVGSNRLQVVIALSGG 422

Query: 195 HLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-P 252
            L+Y E+   G L EV+   +  +++CL I P+ E    S+   VG + D ++ I SL P
Sbjct: 423 ELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLVVGSY-DNTIGILSLDP 481

Query: 253 DLNLITKEHLGGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKT 300
           D  L           P S+L    +       G  Y     L   L +G L    ++M T
Sbjct: 482 DDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVT 541

Query: 301 GELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC 360
           G+L+D +   LG +P  L      +       S RP + Y      L + ++   +    
Sbjct: 542 GQLSDTRSRFLGLRPPKLFPCIVSHRQAKLCLSSRPWLGYIHQGHFLLTPLSCDTLESAS 601

Query: 361 PFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SL 418
            F+S    + +       L I T++ + +  +  +IPL   PR+     + +   +  S 
Sbjct: 602 SFSSDQCSEGVVAVAGDALRIFTVERLGETFNETTIPLRYTPRKFVILPKKKYIPVIESD 661

Query: 419 KNQSCAEESEMHFVRLLDDQTFEFIST 445
           K    AEE E      LD     F+ +
Sbjct: 662 KGAFSAEEREAAKKECLDGCLRAFVPS 688


>gi|221061705|ref|XP_002262422.1| splicing factor 3b, subunit 3, 130kd [Plasmodium knowlesi strain H]
 gi|193811572|emb|CAQ42300.1| splicing factor 3b, subunit 3, 130kd, putative [Plasmodium knowlesi
           strain H]
          Length = 1276

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 23/358 (6%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PI+D  ++D +     Q+    G     SLRI+++G+ I E A  EL G  
Sbjct: 397 LIDQVYSLSPILDMKILDAKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPGRP 456

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           K +W+++      +D +++VSF   T IL +   + +EE       +   T+  +    N
Sbjct: 457 KYIWTIKKDNASDYDGYIIVSFEGSTLILEIG--ETVEEVVDTLLLTNVTTIHVNILYDN 514

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG- 204
            L+QV    +R ++    ++ NEW  P    V  AT+NA+Q++++  GG L+Y EI +  
Sbjct: 515 SLIQVHDTGIRHING---KVINEWVPPKNKQVKAATSNATQIVISLSGGELIYFEIDESH 571

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E+    L  EI CL I  + EN   +   AVG   ++ VR+ S+       +  L  
Sbjct: 572 SLVEIFRKSLNVEILCLSIQEVEENKVRANFLAVGCLDNV-VRLLSIEKEKYFNQ--LST 628

Query: 265 EIIPRSVL---LCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
            I+P +     +C  E           + +L   L +G LL  +++  TG LT+     L
Sbjct: 629 FILPNNSSAQDICISEMCELGNDKERKLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYL 688

Query: 312 GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           G + + +     K    +    ++  + Y    K +YS +N   + +   F+S    D
Sbjct: 689 GAKNVKICPVHVKKNPALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSD 746



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 47/364 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENE-PTKGR 488
            ++++   + + I    L+  E   S+ +C         +C  VGT   L  +N   T   
Sbjct: 930  IKIIHPVSLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTNLSLKNRTATTAA 985

Query: 489  ILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            + V+  + + KL L+     +   +  + FNG+LLA++  K+++Y       G ++L  +
Sbjct: 986  LRVYTYDINYKLNLLHITPVEDQPFCFSPFNGRLLASVGNKLRIYAL-----GKKKLLKK 1040

Query: 548  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            C +     A+  ++  GD I   D+ +S+ +  Y     A+   + D    W++  EILD
Sbjct: 1041 CEYKDIPEAIISIKVSGDRIFASDIRESVLVFFYDANMNALRLISDDIIPRWITCSEILD 1100

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 647
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1101 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEMMAGSNKNRRLEHIMNFHVGE 1159

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 706
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1160 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1212

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G  H  +RS+ +  + V     +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1213 PPLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPYDIQRKVAADLERTPDDILRK 1267

Query: 767  VEEL 770
            +E++
Sbjct: 1268 LEDI 1271


>gi|341893349|gb|EGT49284.1| hypothetical protein CAEBREN_30765 [Caenorhabditis brenneri]
          Length = 213

 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 572 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGAT 630
           M+S+SLL Y+  EG  EE A+D+N+ WM   E +  +  LG E + N+FTV    S   T
Sbjct: 1   MRSVSLLSYRTLEGNFEEVAKDWNSEWMVTCEFITAESILGGEAHLNMFTVEVDKSRPVT 60

Query: 631 DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
           D+ R  LE  G ++LGE         LV +  D+ +     +++GT  G +G++  +   
Sbjct: 61  DDGRYVLEPTGYWYLGELTKVMIRAVLVPQPDDNSIRYTQPIMYGTNQGSLGLVVQIDDM 120

Query: 691 QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMD 750
              FL  ++  +    K    + H  +RSF   K+      F+DGDLIES LD+ R+R  
Sbjct: 121 YKKFLLSIEKAISDAEKNCMQIEHSTYRSFTYNKRIEPPSGFIDGDLIESILDMDRSRAI 180

Query: 751 EISKTMNV---------SVEELCKRVEELTRLH 774
           EI +  N             E+ K +++L+R H
Sbjct: 181 EILEKANTRGWDPSIPKDPVEILKIIDDLSRTH 213


>gi|164658491|ref|XP_001730371.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
 gi|159104266|gb|EDP43157.1| hypothetical protein MGL_2753 [Malassezia globosa CBS 7966]
          Length = 919

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 224/530 (42%), Gaps = 55/530 (10%)

Query: 239 GMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAF--EGISYLLCALGDGHLLNFLL 296
           G W D +V+ +  P +      H+    +P S+L  AF   G ++ +    DGH+  +  
Sbjct: 388 GFW-DRTVQKYVWPSMEG-DPIHIACTSLPTSILQHAFTPHGENHTVVGYADGHVDVY-- 443

Query: 297 NMKTGELTDRKKV----SLGTQPITLRT-----FSSKNTTHVFAASDRPTVIYSSNKKLL 347
                   D+ K+     +GT+PI L T         NT  + A+      +Y  +    
Sbjct: 444 -------NDQDKIVHTCQVGTEPIHLTTAPLSMMELPNTHAIVASGSYTCFLYPQDSAFR 496

Query: 348 YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPL-GEHPRRICH 406
            S   ++ V      ++++   ++  A +  L +  I  +  L I+S+ L G+ P  I  
Sbjct: 497 ASIWLIEHVRAAACVDASSQALTMVCATQFGLEVHAIHTLHHLDIQSLSLKGQQPTSIA- 555

Query: 407 QEQSRTFAICSLKNQSCAEESE--MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 464
                 + + +       E  E  +  +R++     + ++++ L  +E   S  +C    
Sbjct: 556 --SFGPYIVLTTWPMHAWEHHERGLSTIRVMTKAGLKQVTSHSLHAYERPNS--ACVKKF 611

Query: 465 DSNVYYCVGTAYVLPEENEPTKGRILVFIVED--GKLQLIAEKETKGAVYSLNAFNGK-L 521
            +  Y  VGT + +   +  + GR++ +       KLQLI   +  G VY +    G  L
Sbjct: 612 YNTPYIVVGTGFYVGGRDSTSSGRLIGYTWSTPLSKLQLIWSCDVPGHVYGVTDVPGSYL 671

Query: 522 LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYK 581
           +AA++ ++  Y      DG  +L    G     LA  + ++G  +VVGD M S+++L   
Sbjct: 672 VAAVDAQVHTYALC---DGKLKLCDRWG--CAFLATCLTSQGSTVVVGDAMHSLTVLQVD 726

Query: 582 HEEGAIEERARDYNANWMSAVEIL--DDDIYLGAENNFNLFTV-RKNSEGATDEERGRLE 638
             +G + E ARD +  W +AV +L  +   Y+G +   N+F   R +    TD       
Sbjct: 727 -PKGQLHEIARDVDPYWTTAVGVLSTEQQQYIGTDIAMNMFVAERVHQTDGTDPWS---- 781

Query: 639 VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
                H+      F HG +V  +     G+I   +FGT +G +G +  +P E    L  +
Sbjct: 782 -----HVMHRATAFHHGDMVNTIQSVADGRI---LFGTASGSVGTLMYVPDETASMLWCV 833

Query: 699 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL-SRT 747
           Q  L       G L+ E WR+   + +    ++ LD +L+ +F    SRT
Sbjct: 834 QEALSHQRHAHGDLSWESWRTLRTDMQICAPRHVLDAELLTTFFTCESRT 883


>gi|312380158|gb|EFR26239.1| hypothetical protein AND_07834 [Anopheles darlingi]
          Length = 1503

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 212/481 (44%), Gaps = 67/481 (13%)

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDIQKLH----IRSIPLGEHP 401
            LY+   +K  +   PFN+   P+  L   ++ +L I  +           +R IPL   P
Sbjct: 978  LYARTVMKAFA---PFNNVNCPNGFLYFDEQYQLKISILPTYLSYDSVWPVRKIPLRSSP 1034

Query: 402  RRICHQEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLDDQ 438
            ++I +  ++R + +     + C        E+ E+                  V L++  
Sbjct: 1035 KQIVYHRENRVYCVVMDAEEICNKYYRFNGEDKELTEENKGERFLYPMGHQFSVVLVNPA 1094

Query: 439  TFEFI--STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRILV 491
             +E +  +   L+ +E+  S+ + S + +        Y  VGT +    E+  ++GR+L+
Sbjct: 1095 AWEIVPDTAIALEEWEHVVSLKNVSLAYEGARSGLKEYIAVGTNFNY-SEDITSRGRLLL 1153

Query: 492  F-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDG 540
            +     + E GK       + +  K+ KG V +++   G L+ A+ QK+  Y W ++DD 
Sbjct: 1154 YDIIEVVPEPGKPLTKHKFKEVIVKDQKGPVSAISHVCGFLVGAVGQKV--YLWQMKDD- 1210

Query: 541  TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS 600
              +L        +I    + +    I+V D+ KS+SLL ++ E   +   +RDY+   + 
Sbjct: 1211 --DLVGVAFIDTNIFVHQMVSIKSLILVADVYKSVSLLRFQDEFRTLSLVSRDYHPLNVY 1268

Query: 601  AVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR--- 653
             VE + D+  LG   A++  NL T     E        RL   G+YHLG+ VN  FR   
Sbjct: 1269 QVEYVVDNTNLGFLVADDQANLITYMYQPESRESFGGQRLLRKGDYHLGQRVNAMFRVQC 1328

Query: 654  --HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 711
              H S VMR    +     T  F T++G  G +  LP + Y  L  LQ  L        G
Sbjct: 1329 DFHESDVMRR-TLNYDNKHTTFFATLDGGFGFVLPLPEKTYRRLFMLQNVLLTHSPHTCG 1387

Query: 712  LNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
            LN + +R+    +      ++  +DGDL+ SFL+L      E++K +   +EE+C  + E
Sbjct: 1388 LNPKAYRTIKQSRALPINPSRCVVDGDLVWSFLELPANEKQEVAKKIGTRIEEICADLME 1447

Query: 770  L 770
            +
Sbjct: 1448 I 1448



 Score = 43.1 bits (100), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 31/175 (17%)

Query: 23  SYV-EVLERYVNLGPIVDFCVVD---------------LERQGQGQVVTCSGAYKDGSLR 66
           SY+ EV +  +N+GPI    V +               +  +   +VVT SG  K+G+L 
Sbjct: 446 SYIFEVCDSVLNIGPIAHMAVGERICEEEMEEGAEVQFVPNKLDVEVVTASGHGKNGALC 505

Query: 67  IVRNGIGINEQASVELQGIKGMWSL-------------RSSTDDPFDTFLVVSFISETRI 113
           ++++ I      S  L G   +W++             R   D P      +    E   
Sbjct: 506 VLQSSIKPQVITSFGLSGCLDVWTVFDEAAGPGGVTGTRKPDDAPPPNHAFMILSQEGAT 565

Query: 114 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRN 167
           + +   +E+ E E  GF +   T+   +   N+ +VQVT+ S+RL+  T R L+N
Sbjct: 566 MVLQTGEEINEIENTGFATDVPTIHVGNIGSNRFIVQVTTKSIRLLQGT-RLLQN 619


>gi|19075704|ref|NP_588204.1| silencing protein Rik1 [Schizosaccharomyces pombe 972h-]
 gi|13124796|sp|Q10426.2|RIK1_SCHPO RecName: Full=Chromatin modification-related protein rik1; AltName:
            Full=Silencing protein rik1
 gi|6016996|emb|CAB57850.1| silencing protein Rik1 [Schizosaccharomyces pombe]
          Length = 1040

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 171/749 (22%), Positives = 314/749 (41%), Gaps = 84/749 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            NLGPI D  V  L+   +   + C+G  ++ SL   ++ + ++     ++ GI     L 
Sbjct: 341  NLGPIHDLLV--LKNDIEKSFLVCAGTPRNASLIYFQHALKLDILGQTKISGILRAMVLP 398

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
            S  +      L + F SET  +A N++++ +  E++   S  +          + VQVTS
Sbjct: 399  SYPEHK----LFLGFPSET--VAFNIKEDFQ-LELDPSLSTKERTIALSGTNGEFVQVTS 451

Query: 153  GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 212
              + +  S  R      +       N A       ++  G    ++ +      TEV   
Sbjct: 452  TFLCIYDSAKRSRLVYIEK----ITNAACYQEYSAIVINGTALAIFKKD-----TEVARK 502

Query: 213  QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT-KEHLGGEIIPRSV 271
              E EISCLD +      +  QI  VG W+   V I +  D + I+         +PR++
Sbjct: 503  VFESEISCLDFS------AQFQIG-VGFWSK-QVMILTFSDNSSISCAFQTNVPSLPRNI 554

Query: 272  LLCAFEGI----SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 327
            +L   EG+    + LL + G G   +++L       ++ K    GT P++ R F+    T
Sbjct: 555  IL---EGVGVDRNLLLVSSGSGEFKSYVLFKNNLVFSETKH--FGTTPVSFRRFTMNIGT 609

Query: 328  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 387
            ++   +D P ++Y  N  L Y  +++ +   +C F   +  D L     G L    ++ +
Sbjct: 610  YIICNNDCPHMVYGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPL 669

Query: 388  QKLHIRSIPLGEHP-RRICHQEQ--SRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIS 444
             +L  R + L   P + I  Q +   RT        +S  E   +  V   DD +F   S
Sbjct: 670  PELTPRKVLLEHVPLQAIIFQNKLLLRTLENRYEDYESYKENYHLELVDSYDDNSFRVFS 729

Query: 445  TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV--FIVEDGKLQLI 502
                +  E    I   S          VGT+ +  ++  P  GR+++  F  E   L+++
Sbjct: 730  FTENERCEKVLKINESSL--------LVGTSIIEQDKLVPVNGRLILLEFEKELQSLKVV 781

Query: 503  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 562
            +      AV  L  +N + + A  Q++ + K     +    + S       +L L V+  
Sbjct: 782  SSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKLT---EERLMIDSRISLGSIVLQLIVE-- 836

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTV 622
            G+ I + D +   +++ +  ++  +  R   +  N + A  + +  +Y+ A N+  L  +
Sbjct: 837  GNEIAIADSIGRFTIMYFDGQKFIVVARYL-FGENIVKAA-LYEGTVYIIATNSGLLKLL 894

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTVNGV 680
            R N +     +R   E V  YHL + V++F++       P ++      P ++F T  G 
Sbjct: 895  RYNKDAKNFNDRFICESV--YHLHDKVSKFQN------FPITNTNSFLEPKMLFATEIGA 946

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKV-IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
            IG I SL  ++ L LE+L   +RK+    +  +++E       E   +    F+DGDL+ 
Sbjct: 947  IGSIVSLKDKE-LELEELTRKIRKLKFSYLSSMDYESI-----EADLISPVPFIDGDLV- 999

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVE 768
              +D+ R    E+ +        LC+ VE
Sbjct: 1000 --IDVKRWASSELFR--------LCRSVE 1018


>gi|344231825|gb|EGV63707.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
 gi|344231826|gb|EGV63708.1| hypothetical protein CANTEDRAFT_134986 [Candida tenuis ATCC 10573]
          Length = 991

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 160/701 (22%), Positives = 289/701 (41%), Gaps = 113/701 (16%)

Query: 88  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
           +++ + + DD  D +LV+S  SET +L++   +E+ E     F S+  T+         L
Sbjct: 378 IFTTKLTRDDVNDAYLVISS-SETSVLSIG--EEVAEVTDSKF-SKDPTILVQQVGKMAL 433

Query: 148 VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGI 205
           +QV S  ++ ++    E   +W  P G ++  A++N  Q+++      ++Y E+   D +
Sbjct: 434 IQVYSNGIKHING---EKVTDWFPPAGINIIKASSNNQQLIIGLTNNEVIYFEVDVDDQL 490

Query: 206 LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 265
           +      +L   I+ L I         S+  AV    D +V++ SL   N +       E
Sbjct: 491 VEYQDKVELPTNITALAI---------SKDFAVAGCADETVQVISLKQQNCL-------E 534

Query: 266 IIPRSVLLCAFEGISY----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
           I+   +L      I +    +   + +G  +   ++ + G+L++ +   LGT+PI L   
Sbjct: 535 ILSMQMLSSNSSAIEFSEQEVHIGMENGLFVRTNIDAR-GKLSNTRVKYLGTKPIRL--- 590

Query: 322 SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG-ELT 380
            SK    + A S +P V + +N       +N  +++    F S        +   G +L 
Sbjct: 591 -SKINDSILAISSKPWVGFKTNGNFNIVPLNDIDITDGTSFYSEDIGGEGIVGFRGNDLI 649

Query: 381 IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 440
           I TIDD +   I S       + +   E      + SL  +      E            
Sbjct: 650 IFTIDDFRNNFIISTEDIPATKLLVDNE------VYSLGKELVRNNKE------------ 691

Query: 441 EFISTYPLDTFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKL 499
                     F +  S LS C F D    Y  VG          P       F+     +
Sbjct: 692 ---------KFAFEESPLSICRFKD----YVVVGVT-------NPN------FLYTFKDM 725

Query: 500 QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHIL 555
           +L+ + E +    S+  FNG+LL  ++  ++ Y    K +LR   T        H   I+
Sbjct: 726 KLVHKTEVEMPPRSILEFNGRLLVGMDNLLRTYDLGKKQLLRKSST-----AIKHINKII 780

Query: 556 ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
            +  Q + D IVVGD   + S +  K  E +    + D     ++++  LD D  +G + 
Sbjct: 781 RIVYQGK-DRIVVGD--SNNSTIFCKFIENSFVPISDDTMNRQITSLSTLDYDTVIGGDK 837

Query: 616 NFNLFTVRKN-------SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
             N+F  R          E   +   GR + + E+ L +    F  G+LV+  P+     
Sbjct: 838 FGNVFVNRIKYDNTYFVEESYLNGSSGRCQTLAEFFLNDIPMSFTKGTLVLGGPE----- 892

Query: 669 IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
              +I+  + G IG++  +    + FL  L   L K +  + G +H ++R + N      
Sbjct: 893 --VIIYAGLQGTIGILLPISESDFKFLSNLSIELNKDL--LLGRDHMKFRGYYNS----- 943

Query: 729 AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
             N +DGD+IE FL+L+ +   +IS  +N SV E+  ++ +
Sbjct: 944 THNVIDGDIIEKFLELNASSRIKISNKLNKSVREIENKIND 984


>gi|340508225|gb|EGR33979.1| splicing factor subunit 130kda, putative [Ichthyophthirius
           multifiliis]
          Length = 983

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 39/342 (11%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVT-CSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
           NL  I D  V DL  +G  Q+ T CS  Y+  SLRI+R+G+ +NE A+  L G+  G+W+
Sbjct: 398 NLSAISDIKVSDLTGEGHPQIYTLCSAGYRS-SLRILRHGLQVNEVAASRLPGVPTGIWT 456

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++S  D+ F  ++++SF  +T  L +++ D +++    G     QT+  +    N ++QV
Sbjct: 457 IKSRYDENFSKYIILSFSKQT--LVLSISDRVQQVTDSGIDLNKQTIHANLLEDNAIIQV 514

Query: 151 TSGSVRLVSSTSR--ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILT 207
                R +    R  +L+ E K      +  A +N  Q+ ++  GG ++Y E+   G L 
Sbjct: 515 MPDGFRHIRVDKRVQQLKTEGK------IVKAVSNQKQIAISLQGGDIIYFELDYAGQLI 568

Query: 208 EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGG 264
           EV    L+ EI C+DI  +      S+  +VG  +D SVRI SL +   L  I+ + L G
Sbjct: 569 EVAKTNLQEEIECMDIGEVPFGRQKSKFLSVG-CSDHSVRILSLENDTCLQKISIQALPG 627

Query: 265 EIIPRSVLLCAFEGIS-----------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 313
             I  +V L   +  S           YL   L +G LL   ++  TG L+D +   L  
Sbjct: 628 --IAENVSLIEMKRGSGLEQEAEQYQLYLYVGLKNGILLRASVDQITGSLSDTRTRVLSG 685

Query: 314 QPITLRTFSSKNTTHVFA--------ASDRPTVIYSSNKKLL 347
            P+    +  +    + A          D P  +++   KLL
Sbjct: 686 APVRTCKYQVQGQPALLALKLIHKTEVDDIPGSLHAHKGKLL 727



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 43/295 (14%)

Query: 499 LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHI 554
           L+LI + E      SL+A  GKLLA     ++ Y    K +L+    + LQS        
Sbjct: 704 LKLIHKTEVDDIPGSLHAHKGKLLAGCGTFLRYYDIGKKKLLKKSEVKGLQSPING---- 759

Query: 555 LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
               +QT GD I V  +  ++ ++ +K +E    E   D    WMSA ++LD   Y+G +
Sbjct: 760 ----IQTFGDRIFVSMVGDAVHIMKHKQKEQTFYEVCDDVLPRWMSAFQVLDYSTYIGGD 815

Query: 615 NNFNLFTVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGS 656
              N+F  R  +N+E   DE         E G L       E + ++++GE V  F+   
Sbjct: 816 KFENMFVCRIPQNAEEEMDENPMSYKLRWESGYLNGAPYKTEQICQFYVGEVVTTFQKAC 875

Query: 657 LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHE 715
           LV        G    +I+GT  G IG       ++ + F   L+  LR  +  + G +H 
Sbjct: 876 LV------STGN-ECIIYGTSMGSIGAFYPFQTKEDIDFFVHLEMYLRIDVLPLAGRDHV 928

Query: 716 QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R+F    K+V     +DGDL E F+ + + +   +++ M  +  E+ K+++E+
Sbjct: 929 MFRAFYGPVKSV-----IDGDLCEQFMRIGQGKQKVLAEEMERTPAEVHKKLDEI 978


>gi|124806507|ref|XP_001350742.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
           falciparum 3D7]
 gi|23496869|gb|AAN36422.1|AE014849_41 splicing factor 3b, subunit 3, 130kD, putative [Plasmodium
           falciparum 3D7]
          Length = 1329

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 20/369 (5%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PI+D  ++D +     Q+ T  G     SLRI+++G+ I E A  EL G  
Sbjct: 429 LVDQIYSLSPILDMKIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEELADNELPGKP 488

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           K +W+++      +D ++VVSF   T IL +   + +EE       +   TL  +    N
Sbjct: 489 KYIWTIKKDNLSEYDGYIVVSFEGNTLILEIG--ESVEEVSDTLLLNNVTTLHINILYDN 546

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG- 204
             +QV    +R ++    ++  EW +P    +  A++N+SQ++++  GG L+Y EI +  
Sbjct: 547 SFIQVYDTGIRHING---KVVQEWVAPKNKQIKAASSNSSQIVISLSGGELIYFEIDESH 603

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEH 261
            L E+    L  E+ CL I  I  N   +   AVG   ++ VR+ S+        ++   
Sbjct: 604 TLVEIFRKNLNVEVLCLSIQQIPPNRVRANFLAVGCLDNV-VRLLSIEKDKYFKQLSTHL 662

Query: 262 LGGEIIPRSVLLCAF---------EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLG 312
           L     P+ + +              I +L   L  G LL  +++   G L++     LG
Sbjct: 663 LPNNSSPQDICISEMNDNGNTMKERNIIFLNIGLNTGVLLRSIIDPVAGTLSNHYSKYLG 722

Query: 313 TQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLA 372
            + I +   +      +    ++  + Y    K LYS +N   + +   F S    D   
Sbjct: 723 AKSIKICPVNVNKNPALLVLCEKTYLCYMHQGKFLYSPLNYDMLEYASSFYSPQCSDGYV 782

Query: 373 IAKEGELTI 381
                 L I
Sbjct: 783 AISSNSLRI 791



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 45/363 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEP-TKGR 488
            +++++    + +    LD  E   S+ +C         +C  VGT   L  + +  T   
Sbjct: 983  IKIINPVNLQILDKISLDMEEAALSVCACELE----ALHCLIVGTTTNLSLKTKSLTSAS 1038

Query: 489  ILVFIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            + V+  +   KL L+     +   Y   ++NGKL+A+I  K+++Y       G ++L  +
Sbjct: 1039 LRVYTYDIQYKLNLLHITPIEEQPYCFCSYNGKLIASIGNKLRIYAL-----GKKKLLKK 1093

Query: 548  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            C +     A+  ++  G+ I   D+ +S+ +  Y   +  +   + D    W++  EILD
Sbjct: 1094 CEYKDIPEAIVSIKISGNRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITCSEILD 1153

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDE------------------ERGRLEVVGEYHLGEF 648
                + A+   ++F +R   E   DE                  +  +LE +  +H+GE 
Sbjct: 1154 HHTIMAADKFDSVFILRVPEEAKQDEYGITNKCWYGGEIMNSSTKNRKLEHMMSFHIGEI 1213

Query: 649  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIK 707
            V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR    
Sbjct: 1214 VTSMQKVRLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKP 1266

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             + G  H  +RS+ +       +N +DGDL E F  LS     +I+  +  + E++ +++
Sbjct: 1267 PLCGREHIFFRSYYHP-----VQNVVDGDLCEQFSSLSYDAQKKIANDLERTPEDILRKL 1321

Query: 768  EEL 770
            E++
Sbjct: 1322 EDI 1324


>gi|340367935|ref|XP_003382508.1| PREDICTED: splicing factor 3B subunit 3-like isoform 2 [Amphimedon
           queenslandica]
          Length = 1160

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 191/432 (44%), Gaps = 46/432 (10%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L L        V+ +E   +L PI+   + DL  +   Q+    G    
Sbjct: 383 TFFFGPRPLKNLIL--------VDEME---SLSPIMSCQIADLANEDTPQLYAACGRGPR 431

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            SLR++R+G+ + E A  EL G    +W+++  + + FD+++VVSF++ T IL++   + 
Sbjct: 432 SSLRVLRHGLEVTEMAVSELPGNPHAVWTVKKDSKEDFDSYIVVSFMNATLILSIG--ET 489

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + L+Q+    +R + S  R   NEW+SP    +    
Sbjct: 490 VEEVTDSGFLGTTPTLACSQLGDDALIQIYPEGIRHIRSDKR--VNEWRSPGKRLIRQCA 547

Query: 182 ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG +VY E+   G L E  +  ++  E+ C+ +  +       +  AVG
Sbjct: 548 VNEHQVVIALSGGEIVYFEMDQSGQLNEYTERKEMTAEVICISLGSVPPGQQRCRFLAVG 607

Query: 240 MWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK 299
           + +D +VRI SL   +  T + L  + +P          +   LC          ++NM 
Sbjct: 608 L-SDQTVRIISLDPHD--TLQPLSMQALP---------ALPESLC----------IVNM- 644

Query: 300 TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
           +G ++D   VS G   + +          V A S R  + Y+   +   + ++   + + 
Sbjct: 645 SGNVSDDTTVSTGGLFLNI----GLQNGGVIAVSSRTWLNYTYQSRFHLTPLSYDLLEYA 700

Query: 360 CPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSL 418
             F S   P+ +       L I  ++ +  +  + S PL   PR++          +   
Sbjct: 701 SSFTSEQCPEGMVAISSNTLRILALEKLGVVFNQVSTPLQYTPRKLLIHPPMSNLVLIET 760

Query: 419 KNQSCAEESEMH 430
            + +  E +++H
Sbjct: 761 DHNAFTEATKLH 772



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 150/345 (43%), Gaps = 60/345 (17%)

Query: 452  EYGCSILSCSFSDDSNV--YYCVGTAY-VLPEENEPTKGRILVF-IVEDG-KLQLIAEKE 506
            E   S+  C F    ++  +  VGTA  ++      + G ++VF +  DG KL+ +   +
Sbjct: 844  EAAFSLAVCQFVSKGDLEWFVVVGTAKDMIITPRAISSGSLIVFRLSPDGSKLEHVHTTQ 903

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDF 565
                  ++  F G+LL  + + +++Y     D G +++  +C   H   L + ++  G  
Sbjct: 904  LDDVPIAMAPFQGRLLVGVGKLLRIY-----DIGKKKMLRKCENKHLPYLVVDIKVMGRR 958

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            + VGD+ +++  L Y+  E  +   A +    + +   ILD +    A+   N+  +R  
Sbjct: 959  VYVGDVQEAVHFLYYRPHENQLVIFADEVVPRFCTTSCILDYNTVASADKFGNITILRLP 1018

Query: 626  SEGATDE------------ERGRLE-------VVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
            S+  TD+            +RG L        V+  YH+GE +N     SL+        
Sbjct: 1019 SD-VTDQVDEDPSGSRSLWDRGFLNGATQKANVMTSYHVGEGINTLHKVSLI-------P 1070

Query: 667  GQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
            G    +++ T++G IG++      E   F + L+ ++R            +W + +    
Sbjct: 1071 GGSEVLVYTTLSGSIGILVPFSSKEDSDFFQHLEMHMRS-----------EWSNLS---- 1115

Query: 726  TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   +DGDL E +  L  ++  EI+  ++ S  E+ K++E+L
Sbjct: 1116 ------VIDGDLCEVYNSLDPSKRREIALDLDRSPSEVAKKLEDL 1154


>gi|68531971|ref|XP_723667.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23478038|gb|EAA15232.1| Drosophila melanogaster CG13900 gene product [Plasmodium yoelii
           yoelii]
          Length = 1235

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 161/358 (44%), Gaps = 23/358 (6%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PIVD  ++D +     Q+    G     SLRI+++G+ I E A+ EL G  
Sbjct: 397 LVDQIYSLSPIVDMKILDAKNSNLPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKP 456

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           + +W+++      +D +++VSF   T IL +   + +EE       +   T+  +    N
Sbjct: 457 RYIWTVKKDNSSEYDGYIIVSFEGNTLILEIG--ETVEEVYDSLLLTNVTTIHINLLYDN 514

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG- 204
             +QV    +R ++    ++  EW  P    +N AT+N SQ++++  GG L+Y EI +  
Sbjct: 515 SFIQVYDTGIRHING---KIVQEWIPPKNKQINAATSNGSQIVVSLSGGELIYFEIDESH 571

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            LTE+    +  EI CL I  I +N   +   AVG   ++ VR+ S+        + L  
Sbjct: 572 TLTEIFRKNINVEILCLSIQQIQQNKLRASFLAVGCLDNV-VRLLSIEKDQYF--KQLST 628

Query: 265 EIIPRSVL---LCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
            I+P +     +C  E           I YL   L  G LL  +++   G L++     L
Sbjct: 629 YILPNNSSPQDICISEMKELGNQKEHTILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYL 688

Query: 312 GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           G + + +          +   S++  + Y    K +YS +N   + +   F S    D
Sbjct: 689 GAKSVKICHVQVNKNPALLVLSEKTYLCYVYQGKYIYSPLNYDVLEYASSFYSEQCSD 746



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 78/376 (20%), Positives = 154/376 (40%), Gaps = 57/376 (15%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 490
            +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 875  IKIINPINLQIIDKISLELEEAALSVCACELEALHCLIVGTTTNMTLKNRNVPSASLRVY 934

Query: 491  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
             + + + KL L+     +   Y    FNG+++ ++  K+++Y       G ++L  +C +
Sbjct: 935  TYDI-NYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYAL-----GKKKLLKKCEY 988

Query: 551  HGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                 A+  ++  GD I   D+ +S+ +  Y   +  I   + D    W++  EILD   
Sbjct: 989  KDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNLIRLISDDIIPRWITCSEILDHHT 1048

Query: 610  YLGAENNFNLFTVRKN-------------SEGATDEERG-------------------RL 637
             + A+   ++F +R +              E A  EE G                   ++
Sbjct: 1049 IIAADKFDSVFILRVSLLTFFITPFCHLVPEEAKQEEYGIANKCWYGGEVINSSTKNRKM 1108

Query: 638  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH---EQYLF 694
            E +  +H+GE V   +   L    P S       +I+ T+ G IG  A +P+   E+   
Sbjct: 1109 EHIMSFHIGEIVTSLQKVKLS---PTSS----ECIIYSTIMGTIG--AFIPYDSKEELEL 1159

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
             + L+  LR     + G  H  +RS+ +  + V     +DGDL E F  L      +I  
Sbjct: 1160 TQHLEIILRTEKHSLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPFEVQRKIGS 1214

Query: 755  TMNVSVEELCKRVEEL 770
             +  + +E+ +++E++
Sbjct: 1215 DLEKTPDEILRKLEDI 1230


>gi|297816810|ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322126|gb|EFH52547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 149/635 (23%), Positives = 259/635 (40%), Gaps = 127/635 (20%)

Query: 235 IAAVGMWTDISVRIFSL-PD--LNLITKEHLGGEIIPRSVLLCAFEGIS----------- 280
           + AVG + D +VRI SL PD  L +++ + +     P S+L    +              
Sbjct: 20  LLAVGSY-DNTVRILSLDPDDCLQILSVQSVSSA--PESLLFLEVQASIGGEDGADHPAN 76

Query: 281 -YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVI 339
            +L   L +G L   +++M TG+L+D +   LG +P  L + S +  + +   S RP + 
Sbjct: 77  LFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLG 136

Query: 340 YSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLG 398
           Y        + ++ + +    PF+S    + +       L I  ID + +  +   +PL 
Sbjct: 137 YIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLR 196

Query: 399 EHPRRICHQEQSRTFAIC-SLKNQSCAEESE----------------------------- 428
             PR+   Q + +   I  S +    AEE E                             
Sbjct: 197 YTPRKFVLQPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADD 256

Query: 429 ----------------------MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-D 465
                                 +  +R+LD +T        L   E   S+ + +F D +
Sbjct: 257 EDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKE 316

Query: 466 SNVYYCVGTAYVLPEENEPTKGRILVFI-----VEDGK-LQLIAEKETKGAVYSLNAFNG 519
                 VGT   +  +  P K  +  FI     VE+GK L+L+ + + +G   +L  F G
Sbjct: 317 YGTLLAVGTVKGM--QFWPKKNLVAGFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQG 374

Query: 520 KLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI-LALYVQTRGDFIVVGDLMKSISLL 578
           +LLA I   ++LY     D G + L  +C +       + +QT  D I VGD+ +S    
Sbjct: 375 RLLAGIGPVLRLY-----DLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYC 429

Query: 579 IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE----------- 627
            Y+ +E  +   A D    W++A   +D D   GA+   N++ VR   +           
Sbjct: 430 KYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTG 489

Query: 628 GATDEERGRL--------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNG 679
           G    E+G+L        E+V ++H+G+ V   +  S++        G   ++++GTV G
Sbjct: 490 GKIKWEQGKLNGAPNKVDEIV-QFHVGDVVTCLQKASMI-------PGGSESIMYGTVMG 541

Query: 680 VIGVI-ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLI 738
            IG + A    +   F   L+ ++R+    + G +H  +RS          K+ +DGDL 
Sbjct: 542 SIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRS-----AYFPVKDVIDGDLC 596

Query: 739 ESF----LDLSRTRMDEISKTMNVSVEELCKRVEE 769
           E F    +DL R   DE+ +T      E+ K++E+
Sbjct: 597 EQFPTLPMDLQRKIADELDRT----PAEILKKLED 627


>gi|261329035|emb|CBH12013.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            gambiense DAL972]
          Length = 1270

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 179/800 (22%), Positives = 313/800 (39%), Gaps = 127/800 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            N GP+ D  V       +  V+  +G   +G L  VR+ + + +   + + G++ +  + 
Sbjct: 426  NCGPVFDVTVA--ADGSRTSVIAGTGVGLNGGLSFVRSAVSVRQD--IRVTGLQNVRQIS 481

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             S D      ++ S    +R+    + +   LEE     F ++   L  ++   N  +QV
Sbjct: 482  VSEDT-----IIFSLPGYSRVCRYCVGETMVLEEIHNTFFGTEETLLLEYNNERNVFLQV 536

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSVNVAT-----ANASQVLLATGGGHLVYLEIGDGI 205
            T+            LRN W     Y + V+      A+AS+ LL       +Y+      
Sbjct: 537  TTAG----------LRNVWPDRGEYVIRVSNNDIGHAHASEGLLVFSNPANLYV-FCMKT 585

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 265
            LT V    L   ISCL +         S    VG W   +V ++ L D  + +K  L   
Sbjct: 586  LTPVATLCLAEAISCLLVFS-------SNSLLVGTWGSCAVHLYELHDGMIQSKVILQCS 638

Query: 266  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKT--GELTDRKKVSLGTQPITLRTFSS 323
              P S+ +    G   LL  L +G++ +  ++     GE+ +     L TQP+  R F+ 
Sbjct: 639  ATPCSMCVVFRSGGHRLLVGLHNGYVADVPISGANVYGEMVETM---LTTQPV--RLFNL 693

Query: 324  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE--LTI 381
            ++   V    + P ++  +N     + ++ ++VS          P       + E  L +
Sbjct: 694  ESHAAVLCLGEIPLILIVTNTGFQLTGIDFRDVSACAIMPKMRSPSRYIFFSKSECALIL 753

Query: 382  GTIDDIQKLH------------IRSIP----LGEHPRRICHQEQSRTFAICSLKNQSCAE 425
            G+I  +QKL+            ++ +P    L    RRI  ++Q  +     + N S   
Sbjct: 754  GSITSVQKLNTDYVGLKATATCVKYMPWWNILVLSIRRI-EKDQVVSTMGHEVSNLSVLL 812

Query: 426  ESEMHFVRLLDDQTFEFISTYPL-DTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENE 483
            +    F  LL+++   FI    L    E+G    SC   + D+ V   +GT +V P+E  
Sbjct: 813  DEPNSF-ELLENERCAFIDCVALGQANEWG----SCGEVASDAGVVL-IGTTFVFPDEQL 866

Query: 484  PTKGRILVFIVEDGKLQ-------LIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYK 533
                R +   VE  KL+       L   K+ +GA+     +  + G++   I   + LY 
Sbjct: 867  SRSSRFMWCTVEVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYS 926

Query: 534  WMLRDDG-TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
            W   D     E   + G     L   +Q    +IV  D   S   +     +G++   AR
Sbjct: 927  WNAADATFVAEETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVAR 986

Query: 593  DYNANWMSAVEILD----DDIYLGAENNFNLFTVR-----KNSEG--ATDEERGRLEVVG 641
            D     +    IL      D+ LG ++ FN F V       NS G  A      +L+   
Sbjct: 987  DPELRGVMDCAILQYESRHDVCLG-DDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTSA 1045

Query: 642  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 691
            +YH+G+ +     GS         V+ +P + V  +  P +++GT +G  G I  +  E 
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRS--------------------------FNNEKK 725
            ++ L+ L+ ++  V+  +GG  H  +R                           FN  ++
Sbjct: 1106 FILLKGLEVSVASVVPPLGGFTHASFREVLRVGQERGASRNASFQVTNPQATELFNRRRR 1165

Query: 726  TVDAKNFLDGDLIESFLDLS 745
                +    GD++E FL LS
Sbjct: 1166 RCVPRGVCCGDVVEMFLTLS 1185


>gi|146420838|ref|XP_001486372.1| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 172/787 (21%), Positives = 318/787 (40%), Gaps = 105/787 (13%)

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            L++  +GI I+   S  L  I   +++ R S +   D ++V+S  + ++ L + + + +E
Sbjct: 438  LKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDEYMVISSSASSKTLVLAIGEVVE 497

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR-----NEWKSPPGYSVN 178
            E +   F +   T+         L+Q+ S  +R +  T  E +      +W  P G ++ 
Sbjct: 498  EVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTETEGKITKKTFDWYPPAGITII 557

Query: 179  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIA-- 236
             A+ N  QVL+      L Y EI D    ++   Q   E+S   I  +    S+   +  
Sbjct: 558  SASTNQEQVLIGLSNRELCYFEI-DPTDDQLIEYQERIEMSGGQICALALASSFVNKSQR 616

Query: 237  ----AVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG 289
                A+   TD +V++ SL     L  +T + L        ++      +++L   L +G
Sbjct: 617  KSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTSAVIISNETSLVAHL--GLENG 674

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH--VFAASDRPTVIYSSNKKLL 347
              +   L   TG+ +D +   LG   + L   S +      V A S  P + Y S  K  
Sbjct: 675  LYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQLQQVGVLAVSTYPWLCYRSKNKTR 734

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ---------KLHIRSIPLG 398
             + +    +     F S    + +  A   ELTI TI + +         +L I  I L 
Sbjct: 735  ITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIGEDEDNSEMSIEDELAIEDIRLR 794

Query: 399  EHPRRICHQEQSRTFAICS-----LKNQSCAE---------------ESEMHFVRLLDDQ 438
              P ++  ++Q+  F I S     L  QS  E               ES    V++LD +
Sbjct: 795  YSPTKMILEDQT-AFVIESEYGVVLPYQSGEEVDSDYYSAFGYLRKDESWASCVQILDLE 853

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP-EENEPTKGRILVFIVEDG 497
            + +   +  L+  +   S+   +F +    Y  VGTA  L  + N   K +I+ F++   
Sbjct: 854  SKKITFSTELEDNQKPLSLCRMNFGNQK--YLMVGTAKDLTFQLNNNPKYKIITFLINGS 911

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGH 553
            +L+L+   E      ++  F GKLL  + + ++LY    K +LR   T        +   
Sbjct: 912  ELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTL-----VDYLTK 966

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
            I+ +  Q +   IVVGD   S + L Y   +      A D     ++A+E LD D  +G 
Sbjct: 967  IVQITHQGKQR-IVVGDGSNSTTFLKYDSLDNIFVSFADDVMKRHITALECLDHDTVIGG 1025

Query: 614  ENNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
            +   N+F  R                K  +   +    RL+ + E+ L +    F  G+L
Sbjct: 1026 DKFGNVFVNRIPFTLSKQADQEWSLVKYQDHYLNSAGNRLKGLCEFFLQDIPTLFFKGTL 1085

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE-QYLFLEKLQTNLRKVIKG-------- 708
            V        G   ++ +  + G +G    L  + +  F   L+ ++RKV+          
Sbjct: 1086 V-------TGGKESIFYTGLCGSLGFFEPLISKLEVSFFTALENSIRKVLDPNLEEHDKK 1138

Query: 709  -----VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
                 + G +  ++R + N       KN +DGD +E + +L      +I+  ++ +  ++
Sbjct: 1139 RLYCQLLGKDQLKFRGYYNP-----VKNVIDGDFVEYYFELDPRTKTKIATELDRTPRDI 1193

Query: 764  CKRVEEL 770
             +++ ++
Sbjct: 1194 ERKIADI 1200


>gi|11359310|pir||T51288 silencing protein rik1 - fission yeast (Schizosaccharomyces pombe)
 gi|4580723|gb|AAD24488.1|AF136156_1 silencing protein Rik1 [Schizosaccharomyces pombe]
          Length = 916

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 171/752 (22%), Positives = 317/752 (42%), Gaps = 90/752 (11%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
           NLGPI D  V  L+   +   + C+G  ++ SL   ++ + ++     ++ GI     L 
Sbjct: 217 NLGPIHDLLV--LKNDIEKSFLVCAGTPRNASLIYFQHALKLDILGQTKISGILRAMVLP 274

Query: 93  SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
           S  +      L + F SET  +A N++++ +  E++   S  +          + VQVTS
Sbjct: 275 SYPEHK----LFLGFPSET--VAFNIKEDFQ-LELDPSLSTKERTIALSGTNGENVQVTS 327

Query: 153 GSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHA 212
             + +  S  R      +       N A       ++  G    ++ +      TEV   
Sbjct: 328 TFLCIYDSAKRSRLVYIEK----ITNAACYQEYSAIVINGTALAIFKKD-----TEVARK 378

Query: 213 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT-KEHLGGEIIPRSV 271
             E EISCLD +      +  QI  VG W+   V I +  D + I+         +PR++
Sbjct: 379 VFESEISCLDFS------AQFQIG-VGFWSK-QVMILTFSDNSSISCAFQTNVPSLPRNI 430

Query: 272 LLCAFEGI----SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT 327
           +L   EG+    + LL + G G   +++L       ++ K    GT P++ R F+    T
Sbjct: 431 IL---EGVGVDRNLLLVSSGSGEFKSYVLFKNNLVFSETKH--FGTTPVSFRRFTMNIGT 485

Query: 328 HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI 387
           ++   +D P ++Y  N  L Y  +++ +   +C F   +  D L     G L    ++ +
Sbjct: 486 YIICNNDCPHMVYGFNGALCYMPLSMPQSYDVCQFRDNSGKDFLISVSLGGLKFLQLNPL 545

Query: 388 QKLHIRSIPLGEHP-RRICHQEQSRTFAICSLKN-----QSCAEESEMHFVRLLDDQTFE 441
            +L  R + L   P + I  Q +     + +L+N     +S  E   +  V   DD +F 
Sbjct: 546 PELTPRKVLLEHVPLQAIIFQNK---LLLRTLENRYEDYESYKENYHLELVDSYDDNSFR 602

Query: 442 FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV--FIVEDGKL 499
             S    +  E    I   S          VGT+ +  ++  P  GR+++  F  E   L
Sbjct: 603 VFSFTENERCEKVLKINESSL--------LVGTSIIEQDKLVPVNGRLILLEFEKELQSL 654

Query: 500 QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV 559
           ++++      AV  L  +N + + A  Q++ + K     +    + S       +L L V
Sbjct: 655 KVVSSMVLSAAVIDLGVYNDRYIVAFGQQVAIVKL---TEERLMIDSRISLGSIVLQLIV 711

Query: 560 QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNL 619
           +  G+ I + D +   +++ +  ++  +  R   +  N + A  + +  +Y+ A N+  L
Sbjct: 712 E--GNEIAIADSIGRFTIMYFDGQKFIVVARYL-FGENIVKAA-LYEGTVYIIATNSGLL 767

Query: 620 FTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--PTVIFGTV 677
             +R N +     +R   E V  YHL + V++F++       P ++      P ++F T 
Sbjct: 768 KLLRYNKDAKNFNDRFICESV--YHLHDKVSKFQN------FPITNTNSFLEPKMLFATE 819

Query: 678 NGVIGVIASLPHEQYLFLEKLQTNLRKV-IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
            G IG I SL  ++ L LE+L   +RK+    +  +++E       E   +    F+DGD
Sbjct: 820 IGAIGSIVSLKDKE-LELEELTRKIRKLKFSYLSSMDYESI-----EADLISPVPFIDGD 873

Query: 737 LIESFLDLSRTRMDEISKTMNVSVEELCKRVE 768
           L+   +D+ R    E+ +        LC+ VE
Sbjct: 874 LV---IDVKRWASSELFR--------LCRSVE 894


>gi|356570929|ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 208/490 (42%), Gaps = 86/490 (17%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI---NEQASVELQGIKGMW 89
           N+ PI+D  VVD   +   Q+  C G   +GSLRI+RNGI +   +  AS+  QG+ G W
Sbjct: 463 NIAPILDMEVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASI-YQGVSGTW 521

Query: 90  SLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQ 149
           ++R    D   +FLV+SF+ ETRIL++ L    + T+  GF     TL C       LVQ
Sbjct: 522 TVRMKVTDSHHSFLVLSFLDETRILSVGLS-FTDVTDSVGFQPNVCTLACGLVTDGLLVQ 580

Query: 150 VTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEV 209
           +   +V+L   T                  A+ +  ++     GG +  +  G   LT  
Sbjct: 581 IHRSTVKLCLPTK-----------------ASHSEVEIWFFAPGGGITVVACGTISLT-- 621

Query: 210 KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLP-DLNLITKEHLGGEIIP 268
                         N IG                 SV+  S+P D+ L++ +        
Sbjct: 622 --------------NTIG-----------------SVKSDSIPQDVRLVSADKYYVLAGL 650

Query: 269 RSVLLCAFE---------GISYLLCALGDGHLLNFLLNM--KTGELTDRKKV----SLGT 313
           R+ +L  FE          I+ +  AL   +L+N + N   K  +L    ++     +G 
Sbjct: 651 RNGMLLRFEWPAEPCPSSPINMVDTALSSTNLVNSVTNAFDKRNDLPSMLQLIAIRRIGI 710

Query: 314 QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
            PI L          +   +DRP +++S+ + L Y++++ +  +H+ P +   FP  +  
Sbjct: 711 TPIFLVPLGDTLDADIIVLADRPWLLHSARQGLSYTSISFQPATHVTPVSCVEFPKGILF 770

Query: 374 AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMHF 431
             E  L +  +   ++L+++   L   PR++ + ++S+   +    L    C  +     
Sbjct: 771 VAENSLHLVEMGHGKRLNVQKFHLEGTPRKVLYHDESKMLLVMRTELNCGPCLSD----- 825

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA-----YVLPE-ENEPT 485
           +  +D  +   +S++ L+  E G S+        S     VGT+     + +P  E E  
Sbjct: 826 ICCVDSLSGSVLSSFRLELGETGKSMELVRVG--SEQVLVVGTSLSSGPHTMPTGEAESC 883

Query: 486 KGRILVFIVE 495
           KGR+LV  ++
Sbjct: 884 KGRLLVLCLD 893



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            I VGD    I L  Y  E   +E    D +   ++   ++D D  + ++   ++  +  +
Sbjct: 1023 IAVGDCRDGILLYSYHEEAKKLELLYNDPSQRIVADCILMDADTAVVSDRKGSIAVLCSD 1082

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP---------TVI 673
                    +  + +   Y + E     + GS   RLP  DV   G  P         T+I
Sbjct: 1083 HLEDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGGNGPKTNVDSLQNTII 1142

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
              T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V    
Sbjct: 1143 ASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHEFRSRENR---VGVPK 1199

Query: 732  FLDGDLIESFLDLSRTRMDEI 752
             LDGD++  FL+L+  +   I
Sbjct: 1200 ILDGDILTQFLELTSMQQKMI 1220


>gi|312076588|ref|XP_003140928.1| xeroderma Pigmentosum Group E Complementing protein [Loa loa]
          Length = 516

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 110/164 (67%), Gaps = 9/164 (5%)

Query: 10  QLIKLNLQPDAKGS-YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIV 68
           QLI+L+ +P A G+ Y+ +L+ Y NL PI D  V  +   GQ Q++TCSGAYKDG++RI+
Sbjct: 335 QLIRLSTEPRADGTGYISLLDSYTNLAPIRDMTV--MRCNGQQQILTCSGAYKDGTIRII 392

Query: 69  RNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
           RNGIGI E ASVEL+GIK M++LR+  D  FD +L++SF S+T +L +N E ELE+T+I 
Sbjct: 393 RNGIGIEELASVELKGIKNMFTLRTR-DHEFDDYLILSFDSDTHVLLINGE-ELEDTQIT 450

Query: 129 GFCSQTQTLFCHDAIYN-QLVQVTSGSVRLVSSTSRELRNEWKS 171
           GF     TL+      +  ++QVT G V L+   + ++   WK+
Sbjct: 451 GFVVDGATLWAGCLFQSTTILQVTHGEVILIDGDNIQI---WKA 491


>gi|167539942|ref|XP_001741428.1| DNA repair protein xp-E [Entamoeba dispar SAW760]
 gi|165894130|gb|EDR22214.1| DNA repair protein xp-E, putative [Entamoeba dispar SAW760]
          Length = 1004

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 168/771 (21%), Positives = 337/771 (43%), Gaps = 126/771 (16%)

Query: 26   EVLERYVNLGPIVDFCVVDLERQ--GQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            ++LE++ N G ++D       RQ   +   +        GS+ ++  G GI E  + E+ 
Sbjct: 334  KILEKWSNFGSLMD------ARQISNREDYLVAGNGGGKGSIGLMIKGSGIEELGACEID 387

Query: 84   GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE---LEETEIEGFCSQTQTLFCH 140
            GIK + S+  ++      +++V F  E+ I  ++ + +   +EE+ ++    + + + C 
Sbjct: 388  GIKSIESIEYNSK----KYVIVGFEEESNIWEIHQKSKHIKIEESLLKKIIGKERVICC- 442

Query: 141  DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              I  +L+ V    +  +    +  +N       +  +    N  Q +    G  L   +
Sbjct: 443  GIIKERLIFVCKKGIYSIDKHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FK 496

Query: 201  IGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKE 260
            I + +  + K   LE  +SC D N         +I  +G+W D S+ IF   D+N + K+
Sbjct: 497  INEELKIQ-KMKDLEQNVSCFDAN---------EIIVIGLW-DGSILIF---DINGVLKK 542

Query: 261  HLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPIT 317
                + I RSVL+   +   Y+ C   D  ++ FL +    +   + K+      +Q + 
Sbjct: 543  TEVVDTIGRSVLIDNNK--IYVGC---DNEIIIFLYHQMEEDCKYKNKLKYQVEASQSVK 597

Query: 318  LRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLA 372
            L+   S            P V+  +NK   +    L     +++  +C     A+   + 
Sbjct: 598  LKKLYS-----------IPCVV--ANKTFTFQQTGLVPLAVEDLIDICESPVGAY--GII 642

Query: 373  IAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 432
             A +  +  G + ++ ++  + I  GE+  +I   + SR   +             +  +
Sbjct: 643  CATKRGIVFGLMKEMSRVTFKMIHSGENCCKIA-TDGSRGLIV----------GKTIKSI 691

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILV 491
             L+D        ++ + T E   + L+ C  S + N+Y  VGTA +   E EP+ GRIL+
Sbjct: 692  NLVD-------GSFGVTTVELKSNELALCVDSLEDNIY-AVGTAIIRENEIEPSSGRILL 743

Query: 492  FIVE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
               + +G + ++  ++  GAVY L  +   ++A IN+ + + +   +D  T++       
Sbjct: 744  IRQDSEGLIYIVGTEDYDGAVYCLKKYQKGIVAFINRNVHVIEKKGKDLSTKQ-----NM 798

Query: 551  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI- 609
               ++ + +    D+I+ GDL +S+S+  Y+++   ++   +D    W S V  ++ +  
Sbjct: 799  LLPLIGVSLDICKDYIIAGDLARSVSVYRYRNDIEHLDIVGKDNQIVWSSCVGSIESEYG 858

Query: 610  --YLGAENNFNLFTVRKNSE-GATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLP 662
              +L A+ + N+     N E   TD+E+  + ++ + H+ + +N     F  G L+    
Sbjct: 859  TSFLVADVSGNIKIFNSNEEEPKTDDEK--INLISQVHIADSINFIQKSFYKGCLM---- 912

Query: 663  DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN 722
                        G V+G I  I  +  EQYLFL+K+Q+ L K            WR   N
Sbjct: 913  ------------GGVHGGIYNICEISKEQYLFLDKIQSKLVK----------PNWRESVN 950

Query: 723  EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             ++T    N +DGD IES L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 951  TQQTNPMMNCIDGDKIESVLEWSEKKQILLAQKIGVEYQEMIEKIQSLFSL 1001


>gi|156095699|ref|XP_001613884.1| Splicing factor 3B subunit 3 [Plasmodium vivax Sal-1]
 gi|148802758|gb|EDL44157.1| Splicing factor 3B subunit 3, putative [Plasmodium vivax]
          Length = 1230

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 161/358 (44%), Gaps = 23/358 (6%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PI+D  V+D +     Q+    G     SLRI+++G+ I E A  EL G  
Sbjct: 397 LIDQVYSLSPILDMKVIDAKNASSPQIYALCGRGPRSSLRILQHGLSIEELADNELPGRP 456

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           K +W+++      +D +++VSF   T IL +   + +EE       +   T+  +    N
Sbjct: 457 KFIWTIKKDNASDYDGYIIVSFEGSTLILEIG--ETVEEVVDSLLLTNVTTIHVNILYDN 514

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG- 204
            L+QV    +R ++    ++ +EW  P    +  AT+N +Q++++  GG L+Y EI +  
Sbjct: 515 SLIQVHDAGIRHING---KVIHEWVPPKNKQIKAATSNCAQIVISLSGGELLYFEIDESH 571

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E     L  E  CL I  + EN   +   AVG   ++ VR+ S+       +  L  
Sbjct: 572 TLVETFRKNLNVETLCLSIQQVQENKLRANFLAVGCLDNV-VRLLSIEKEKYFNQ--LST 628

Query: 265 EIIPRSVL---LCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
            I+P +     +C  E           + +L   L +G LL  +++  TG LT+     L
Sbjct: 629 FILPNNSSAQDICITEMSELGNDKERKLLFLNIGLNNGVLLRSVVDPITGTLTNHYSKYL 688

Query: 312 GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           G + + +     K    +    ++  + Y    K +YS +N   + +   F+S    D
Sbjct: 689 GAKNVKICPVHVKKNAALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSD 746



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 47/364 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEPTKGRI 489
            ++++     + I    L+  E   S+ +C         +C  VGT   L  +N       
Sbjct: 884  IKIIHPVNLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTSLSLKNRSAPAAA 939

Query: 490  LVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            L     D   KL L+     +   +    FNG+LLA+I  K+++Y       G ++L  +
Sbjct: 940  LRVYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-----GKKKLLKK 994

Query: 548  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            C +     A+  ++  GD I   D+ +S+ +  Y      +   + D    W++  EILD
Sbjct: 995  CEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDANMNTLRLISDDIIPRWITCSEILD 1054

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 647
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1055 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSFHVGE 1113

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 706
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1114 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1166

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G  H  +RS+ +  + V     +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1167 PPLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPYDVQRKVAADLERTPDDILRK 1221

Query: 767  VEEL 770
            +E++
Sbjct: 1222 LEDI 1225


>gi|412993390|emb|CCO16923.1| predicted protein [Bathycoccus prasinos]
          Length = 1273

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 24/338 (7%)

Query: 64  SLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
           + R++R G+ ++E A   L G   G++++R S  D  D ++VVSF + T +L++   D +
Sbjct: 452 TFRVLRQGVPLSEMARSPLPGNPNGVFTIRKSKSDTTDAYIVVSFTNATLVLSIG--DTV 509

Query: 123 EETEIEGFCSQTQTLFCH---DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNV 179
           EE    G  + + TL      D     L+Q+    VR V   ++ + NEW++P    +  
Sbjct: 510 EEVTDTGILATSSTLAVSALGDDDDGSLIQIHPSGVRHVRGNNKGV-NEWRAPGRKKITA 568

Query: 180 ATANASQVLLATGGGHLVYLEIGD-GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAV 238
              N  Q ++A  GG LVY E+ + G L E++  +   E+  +DI PI +    ++ AAV
Sbjct: 569 CACNRGQAIVALTGGELVYFELDEAGQLLEIEKIETSSEVVSVDIPPIPDGSLRAKFAAV 628

Query: 239 GMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFEGIS--------------YLL 283
             + D +VR+ SL P   L T         P SVLL      +              +L 
Sbjct: 629 AGY-DSTVRVLSLNPGEALRTVGVQATPSPPESVLLLEVNNKTTKNKKAGSSAPPSMFLN 687

Query: 284 CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSN 343
             L +G L+   ++  +G L+D +   +G +P  L        +   A S RP + ++ N
Sbjct: 688 VGLSNGILVRCEVDRVSGALSDARSRFVGQRPPKLNRIEMNEESGFVALSTRPWLGFNEN 747

Query: 344 KKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI 381
            +        + +   C F S   P+ +    +G L I
Sbjct: 748 GRFSIVPACHETIDRACGFASEQVPEGIVAVVDGSLRI 785



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 46/301 (15%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECGHHGHILA 556
            L+L+ E   +GA ++L  F GKLL  ++  ++LY     D G ++L  ++EC        
Sbjct: 985  LELVHETPCEGAPFALRNFEGKLLVGVDDVLRLY-----DFGKKKLLRKAECAQKFPSFI 1039

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHE---EGAIEERARDYNANWMSAVEILDDDIYLGA 613
              ++  GD   V D  +S   + Y  E   E ++   A D    +++++  LD D    +
Sbjct: 1040 NDIRCSGDRFFVTDACESAFFVKYVREDDQECSMHIFADDIAPRYVTSMLPLDRDTVAVS 1099

Query: 614  ENNFNLFTVRKNSE-----------------------GATDEERGRLEVVGEYHLGEFVN 650
            +   N   +R   +                       GA +    +L+   ++H+G+ + 
Sbjct: 1100 DKFGNFAALRLPKDVSDEIESDISGGKHAALTSSAALGALNGANNKLQACAQFHVGDVIC 1159

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP-HEQYLFLEKLQTNLRKVIKGV 709
                 +L         G    +++ T+ G +G        ++  F   L+ +LR     V
Sbjct: 1160 SLTKCAL-------QTGGSEVIVYATLGGALGAFVPFASKDEADFCTHLEMHLRIEAPPV 1212

Query: 710  GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
             G  H  +RS          K  +DGDL E F  L       IS+ M+ +  E+ KR+E+
Sbjct: 1213 LGNEHGAFRS-----SYFPVKAVVDGDLCEQFGRLGADAQRRISEEMDRTPSEIVKRLEQ 1267

Query: 770  L 770
            +
Sbjct: 1268 I 1268


>gi|389586447|dbj|GAB69176.1| splicing factor 3B subunit 3 [Plasmodium cynomolgi strain B]
          Length = 1286

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 163/358 (45%), Gaps = 23/358 (6%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PI+D  ++D +     Q+    G     SLRI+++G+ I E A  EL G  
Sbjct: 397 LIDQVYSLSPILDMKILDAKNANSPQIYALCGRGPRSSLRILQHGLSIEELADNELPGRP 456

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           K +W+++      +D +++VSF   T IL +   + +EE       +   T+  +    N
Sbjct: 457 KFIWTIKKDNASDYDGYIIVSFEGSTLILEIG--ETVEEVVDSLLLTNVTTIHVNILYDN 514

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG- 204
            L+QV    +R ++    ++ +EW  P    +  AT+N++Q++++  GG L+Y EI +  
Sbjct: 515 TLIQVHDTGIRHING---KVVHEWVPPKNKQIKAATSNSTQIVISLSGGELIYFEIDESH 571

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            L E+    L  E  CL I  + EN   +   AVG   ++ VR+ S+       +  L  
Sbjct: 572 TLVEIFRKNLNVETLCLSIQQVEENKLRANFLAVGCLDNV-VRLLSIEKEKYFNQ--LST 628

Query: 265 EIIPRS--------VLLCAF-----EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL 311
            I+P +          +C         + +L   L +G LL  +++  TG LT+     L
Sbjct: 629 FILPNNSSAQDICISQMCELGNDKERKLIFLNIGLNNGVLLRSVVDPITGTLTNHYSKYL 688

Query: 312 GTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
           G + + +     K  + +    ++  + Y    K +YS +N   + +   F+S    D
Sbjct: 689 GAKNVKICPVHLKKNSALLVLCEKTYLCYVHQGKYIYSPLNYDILEYASSFHSEQCSD 746



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 47/364 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYC--VGTAYVLPEENEPTKGRI 489
            ++++   + + I    L+  E   S+ +C         +C  VGT   L  +N       
Sbjct: 940  IKIIHPISLQTIDKISLEMEEAALSVCACELE----ALHCLIVGTTTNLSLKNRTAPAAA 995

Query: 490  LVFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            L     D   KL L+     +   +    FNG+LLA+I  K+++Y       G ++L  +
Sbjct: 996  LRVYTYDINYKLNLLHITPVEDQPFCFCPFNGRLLASIGNKLRIYAL-----GKKKLLKK 1050

Query: 548  CGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            C +     A+  ++  GD I   D+ +S+ +  Y      +   + D    W++  EILD
Sbjct: 1051 CEYKDIPEAIISIKVSGDRIFASDIRESVLIFFYDSNMNTLRLISDDIIPRWITCSEILD 1110

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGE 647
                + A+   ++F +R   E A  EE G                   RLE +  +H+GE
Sbjct: 1111 HHTIMAADKFDSVFVLRVPEE-AKQEEYGISNKCWYGGEIMAGSNKNRRLEHIMSFHVGE 1169

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVI 706
             V   +   L    P S       +I+ T+ G IG      +++ L L + L+  LR   
Sbjct: 1170 IVTSLQKVKLS---PTSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEN 1222

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              + G  H  +RS+ +  + V     +DGDL E F  L      +++  +  + +++ ++
Sbjct: 1223 PPLCGREHIFFRSYYHPVQHV-----IDGDLCEQFSSLPYDVQRKVAADLERTPDDILRK 1277

Query: 767  VEEL 770
            +E++
Sbjct: 1278 LEDI 1281


>gi|190345965|gb|EDK37945.2| hypothetical protein PGUG_02043 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1206

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 168/787 (21%), Positives = 315/787 (40%), Gaps = 105/787 (13%)

Query: 65   LRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
            L++  +GI I+   S  L  I   +++ R S +   D ++V+S  + ++ L + + + +E
Sbjct: 438  LKLKTHGIPISTLVSSPLPMIATSVFTTRLSAESKNDEYMVISSSASSKTLVLAIGEVVE 497

Query: 124  ETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR-----NEWKSPPGYSVN 178
            E +   F +   T+         L+Q+ S  +R +  T  E +      +W  P G ++ 
Sbjct: 498  EVQDSSFVTDQPTIGVQQVGLKSLIQIYSNGIRHIRQTETEGKITKKTFDWYPPAGITII 557

Query: 179  VATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIA-- 236
             A+ N  QVL+      L Y EI D    ++   Q   E+S   I  +    S+   +  
Sbjct: 558  SASTNQEQVLIGLSNRELCYFEI-DPTDDQLIEYQERIEMSGGQICALALASSFVNKSQR 616

Query: 237  ----AVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG 289
                A+   TD +V++ SL     L  +T + L        ++      +++L   L +G
Sbjct: 617  KSPFALVACTDETVQVISLQQHNCLETLTFQALSANCTSAVIISNETSLVAHL--GLENG 674

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTH--VFAASDRPTVIYSSNKKLL 347
              +   L   TG+ +D +   LG   + L   S + +    V A S  P + Y S  K  
Sbjct: 675  LYVRSTLESITGKFSDTRVKYLGADSVKLSAISLRQSQQVGVLAVSTYPWLCYRSKNKTR 734

Query: 348  YSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ---------KLHIRSIPLG 398
             + +    +     F S    + +  A   ELTI TI + +         +L I  I L 
Sbjct: 735  ITPLMGANIKCGTSFYSEEIGEGIVGASASELTIFTIGEDEDNSEMSIEDELAIEDIRLR 794

Query: 399  EHPRRICHQEQSRTFAI--------------------CSLKNQSCAEESEMHFVRLLDDQ 438
              P ++  ++Q+  F I                     S    S  +ES    V++LD +
Sbjct: 795  YSPTKMILEDQT-AFVIESEYGVVSPYQSGEEVDSDYYSAFGYSRKDESWASCVQILDLE 853

Query: 439  TFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP-EENEPTKGRILVFIVEDG 497
            + +   +  L+  +   S+   +F +    Y  VGTA  L  + N   K +I+ F++   
Sbjct: 854  SKKITFSTELEDNQKPLSLCRMNFGNQK--YLMVGTAKDLTFQLNNNPKYKIITFLINGS 911

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGH 553
            +L+L+   E      ++  F GKLL  + + ++LY    K +LR   T        +   
Sbjct: 912  ELELLHYTEVDHPPAAMIPFEGKLLVGMGKYLRLYELGKKQLLRKSSTL-----VDYLTK 966

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
            I+ +  Q +   IVVGD   S + L Y   +      A D     ++A+E LD D  +G 
Sbjct: 967  IVQITHQGK-QRIVVGDGSNSTTFLKYDSSDNIFVSFADDVMKRHITALECLDHDTVIGG 1025

Query: 614  ENNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
            +   N+F  R                K  +   +    R + + E+ L +    F  G+L
Sbjct: 1026 DKFGNVFVNRIPFTLSKQADQEWSLVKYQDHYLNSAGNRSKGLCEFFLQDIPTSFFKGTL 1085

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKG-------- 708
            V        G   ++ +  + G +G    L    +  F   L+ ++RKV+          
Sbjct: 1086 V-------TGGKESIFYTGLCGSLGFFEPLISKSEVSFFTALENSIRKVLDPNLEEHDKK 1138

Query: 709  -----VGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
                 + G +  ++R + N       KN +DGD +E + +L      +I+  ++ +  ++
Sbjct: 1139 RLYCQLLGKDQLKFRGYYNP-----VKNVIDGDFVEYYFELDPRTKTKIATELDRTPRDI 1193

Query: 764  CKRVEEL 770
             +++ ++
Sbjct: 1194 ERKIADI 1200


>gi|68075683|ref|XP_679761.1| splicing factor 3b, subunit 3, 130kD [Plasmodium berghei strain
           ANKA]
 gi|56500578|emb|CAH95367.1| splicing factor 3b, subunit 3, 130kD, putative [Plasmodium berghei]
          Length = 1216

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 23/349 (6%)

Query: 36  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSS 94
           PIVD  ++D +     Q+    G     SLRI+++G+ I E A+ EL G  + +W+++  
Sbjct: 405 PIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKPRYIWTIKKD 464

Query: 95  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
               +D +++VSF   T IL +   + +EE       +   T+  +    N  +QV    
Sbjct: 465 NSSEYDGYIIVSFEGNTLILEIG--ETVEEVYDSLLLTNVTTIHINLLYDNSFIQVYDTG 522

Query: 155 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG-ILTEVKHAQ 213
           +R ++    ++  EW  P    +N AT+N SQ++++  GG L+Y EI +   LTE+    
Sbjct: 523 IRHING---KIVQEWVPPKNKQINAATSNGSQIVISLSGGELIYFEIDESHTLTEIFRKN 579

Query: 214 LEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVL- 272
           +  EI CL I  I +N   +   AVG   ++ VR+ S+        + L   I+P +   
Sbjct: 580 INVEILCLSIQQIQQNKLRASFLAVGCLDNV-VRLLSIEKDQYF--KQLSTYILPNNSSP 636

Query: 273 --LCAFE----------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRT 320
             +C  E           I YL   L  G LL  +++   G L++     LG + + +  
Sbjct: 637 QDICISEMKELGSQKEHTILYLNIGLNTGVLLRSVIDPICGTLSNHYSKYLGAKSVKICH 696

Query: 321 FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPD 369
                   +   S++  + Y    K +YS +N   + +   F S    D
Sbjct: 697 VQVNKNPALLVLSEKTYLCYVYQGKYIYSPLNYDVLEYASSFYSEQCSD 745



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 149/360 (41%), Gaps = 40/360 (11%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 490
            +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 871  IKIINPINLQVIDKISLELEEAALSVCACELEALHCLIVGTTTNMTLKSRNVPSASLRVY 930

Query: 491  VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
             + + + KL L+     +   Y    FNGK++ ++  K+++Y       G ++L  +C +
Sbjct: 931  TYDI-NYKLNLLHITPIEDQPYCFCPFNGKVIVSVGNKLRIYAL-----GKKKLLKKCEY 984

Query: 551  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
                 A+      + I   D+ +S+ +  Y   +  I   + D    W++  EILD    
Sbjct: 985  KDIPEAIVSIKVSNRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHTI 1044

Query: 611  LGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGEFVNR 651
            + A+   ++F +R   E A  EE G                   ++E +  +H+GE V  
Sbjct: 1045 IAADKFDSVFILRVPEE-AKQEEYGIANKCWYGGEVINSSTKNRKMEHIMSFHIGEIVTS 1103

Query: 652  FRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIKGVG 710
             +   L    P S       +I+ T+ G IG      +++ L L + L+  LR     + 
Sbjct: 1104 LQKVKLS---PVSS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKHALC 1156

Query: 711  GLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            G  H  +RS+ +       ++ +DGDL E F  L      +I   +  + +E+ +++E++
Sbjct: 1157 GREHIFFRSYYHP-----VQHVIDGDLCEQFSSLPFEVQRKIGSDLEKTPDEILRKLEDI 1211


>gi|297810341|ref|XP_002873054.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318891|gb|EFH49313.1| hypothetical protein ARALYDRAFT_908112 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 114

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 67/103 (65%), Gaps = 6/103 (5%)

Query: 381 IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 440
           I  ID  QK ++ +IPLGE+   ICHQ Q+ T+ IC+         S  HFVRLL+DQTF
Sbjct: 13  IIAIDATQKHNVLTIPLGEYASCICHQAQTCTYGICT------GTHSGTHFVRLLEDQTF 66

Query: 441 EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENE 483
             +S Y LD +E G SI+SC F+ DSN YYCVGT YV PEE +
Sbjct: 67  NVLSAYTLDPYERGLSIVSCLFTADSNEYYCVGTEYVFPEEED 109


>gi|335310432|ref|XP_003362030.1| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 701

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 21/253 (8%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC-VVDLERQGQGQVVTCSGAYK 61
           TF+  P+ L  L L           ++   +L PI+ FC + DL  +   Q+    G   
Sbjct: 383 TFFFQPRPLKNLVL-----------VDELDSLSPIL-FCQIADLANEDTPQLYVACGRGP 430

Query: 62  DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
             SLR++R+G+ ++E A  EL G    +W++R   +D FD +++VSF++ T +L++   +
Sbjct: 431 RSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIG--E 488

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
            +EE    GF   T TL C     + LVQV    +R + +  R   NEWK+P   ++   
Sbjct: 489 TVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKR--VNEWKTPGKKTIVKC 546

Query: 181 TANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAV 238
             N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  +      S+  AV
Sbjct: 547 AVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAV 606

Query: 239 GMWTDISVRIFSL 251
           G+  D +VRI SL
Sbjct: 607 GL-VDNTVRIISL 618


>gi|340054355|emb|CCC48651.1| putative damage-specific DNA binding protein [Trypanosoma vivax Y486]
          Length = 1272

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 176/819 (21%), Positives = 322/819 (39%), Gaps = 124/819 (15%)

Query: 33   NLGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL 91
            N GP+ D  V VD  R     V+  +G    G L ++R+ + + + A+V   G+  +  +
Sbjct: 426  NCGPVFDMTVAVDGPRM---SVIASTGVGLSGGLNLLRSAVNVCQFAAV--HGVVNVKRV 480

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI--EGFCSQTQTLFCHD-AIYNQLV 148
              + +      +++SF   +R+    +   +E  E+    F +  +TL   D +     +
Sbjct: 481  CMAGN-----VIILSFPGYSRVCHFAVGKTMEVVEVYETPFDTLVETLELVDISQGGAFL 535

Query: 149  QVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTE 208
            QVT+  V  V  T +E  +     PG+  +V  A++        GG LV+       +  
Sbjct: 536  QVTTSGVNAVQGTMQEYIHR----PGHGKSVEHAHSC-------GGMLVFSSYTSICVLA 584

Query: 209  VK--HAQL----EYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
            V   H+ +    EYE+S L +         +    VG W   ++ ++ +    +  +   
Sbjct: 585  VNEPHSVITFHSEYEVSSLAM-------VSTTSLLVGEWGSNAISLYDVTAEGVHPRGRF 637

Query: 263  GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT-QPITLRTF 321
                 P SV +  + G S LL  L +G++ + LL+   G+ + +   +L T  P+ L   
Sbjct: 638  TCSATPCSVSVIPYHGTSRLLVGLLNGYVADVLLDDIAGDSSVKVAETLLTLHPVRLFNL 697

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK--EVSHMCPFNSAAFPDSLAIAKEGEL 379
             S N   V    + P VI  S+     + ++L   E+  + P + +         KE  L
Sbjct: 698  QSHNA--VLCLGEVPLVIIVSDNGFQITGIDLYGIELCGIIPSSCSPVRYIFHSKKEQSL 755

Query: 380  TIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--------------SCAE 425
              G I D+Q+L+    PL      + +      F +   +N+                  
Sbjct: 756  IFGNITDVQRLNTNFFPLRATVTLVKYMAWWNVFVMSLRRNERDQILTIMGYELWAPSPL 815

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPT 485
              E + + LL+++   F+ +  L     G +  S       N    +GT +  P+E    
Sbjct: 816  RDEQNSLELLENERCVFVESVILG----GGNEWSTGTDALENSAIIIGTTFAFPDEQLSR 871

Query: 486  KGRILVFIVEDGK-------LQLIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYKWM 535
              R +   VE GK       L+    K+ +GA+     +  + G++   IN  + LY W 
Sbjct: 872  SSRFMWCSVEQGKTANEKPQLRQQGSKDVQGALGCCCVVPNYAGRIALGINGCVALYCWN 931

Query: 536  LRDDGTRELQSECGHHGHILALYV---QTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
              D  +  +  E    G IL   +   Q    ++V  D   S S++     +G++   AR
Sbjct: 932  AVD--STFIAEETIGVGMILTRLMPVLQHDMSYLVAFDSRHSSSVIAVDTIQGSLSVAAR 989

Query: 593  DYNANWMSAVEILD----DDIYLGAENNFNLFTVRKNSEGATDEERG-------RLEVVG 641
            D     +    +L     DD+  G ++ FNLF V      AT  +         +L    
Sbjct: 990  DPELRGVMDGTVLHSGARDDMCFG-DDFFNLFCVPHVMPSATSPDAPAAGMPTCKLPTSA 1048

Query: 642  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 691
            +YH+G+ +   + GS         V+ +P   +  +  P ++FGT +G  G I  +  E 
Sbjct: 1049 QYHVGDLITAMQQGSFAPCSLSNGVVPVPKVLIPGVCGPQIVFGTTHGSFGTITPVTSET 1108

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTVD--------------------- 728
            YL L+ ++  +  V+  +GG +H  +R     N+++ V                      
Sbjct: 1109 YLLLKGIEVAVAAVVPALGGFSHAAYREVLCANQERGVSRNASFEAVNPRAMEVLRERRL 1168

Query: 729  ---AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
               A+    GDL+E FL LS      + +   + ++  C
Sbjct: 1169 KYVARCVCSGDLVEMFLTLSPDTQLRVIEEAAMHIQRWC 1207


>gi|427780291|gb|JAA55597.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit [Rhipicephalus pulchellus]
          Length = 1237

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 211/507 (41%), Gaps = 76/507 (14%)

Query: 329  VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 385
            VF    RP  ++ S++  L  +    +    C  PF++   P   L   K+GEL I T+ 
Sbjct: 735  VFLCGYRPYWLFMSSRGELRCHPMFVDGPIHCFAPFHNVNCPKGFLHFNKQGELRISTLP 794

Query: 386  D----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEMHFVR- 433
                      +R +PL   P  + +   S+T+ + + +   C        EE E   +  
Sbjct: 795  THLTYDAPWPVRKVPLRCTPHFVNYHVDSKTYCVVTSQPDPCNHLVRFTGEEKEYELLER 854

Query: 434  -------LLDDQTFEFIS-----TYP-----LDTFEYGCSILSCSFSDDSNV-----YYC 471
                    +D  + + +S     T P     LD +E+   + +   S +        Y  
Sbjct: 855  DSRYIFPTMDKFSLQLLSPVSWETIPNTRVDLDEWEHLTCLKNVMLSSEGTTTGMKGYLA 914

Query: 472  VGTAYVLPEE--------------NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
            +GT Y   E+                P  G+ L       K++++  KE KG V +L+  
Sbjct: 915  LGTNYCYGEDVTSRGRIIILDIIDVVPEPGQPLT----KNKIKIVYSKEQKGPVTALSQV 970

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
             G LL+AI QKI  Y W L+D+   EL         I    V T  + I+VGD+ KS+SL
Sbjct: 971  VGFLLSAIGQKI--YIWQLKDN---ELVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 1025

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 632
            L Y+     +   +RD     + AVE   D+  +      AE N  L+  +  S  +   
Sbjct: 1026 LRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERNLLLYMYQPESRESCGG 1085

Query: 633  ERGRLEVVGEYHLGE-----FVNRFRHGSLVM--RLPDSDVGQIPTVIFGTVNGVIGVIA 685
            +R  L   G++H+G      F  + R G +    R   S V      +  T++G +  + 
Sbjct: 1086 QR--LLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASIVDGRHITMMATLDGSLAYVL 1143

Query: 686  SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLD 743
             +P + Y  L  LQ  L   I    GLN + +R + ++++ +    KN LDG+LI  F+ 
Sbjct: 1144 PVPEKTYRRLLMLQNVLVTNIPHYAGLNPKAYRMYYSQRRFLGNPHKNILDGELIWKFMH 1203

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEEL 770
            LS     E+SK +  +V ++   + E+
Sbjct: 1204 LSFMERSELSKKIGTTVTQITDDLLEI 1230


>gi|147787360|emb|CAN64633.1| hypothetical protein VITISV_043788 [Vitis vinifera]
          Length = 1143

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 185/417 (44%), Gaps = 47/417 (11%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QP    + V + ++  +L PI+D  V +L  +   Q+    G     S+RI+R G+ I+
Sbjct: 367 FQPRGLKNLVRI-DQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAIS 425

Query: 76  EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           E A  +L G+   +W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T
Sbjct: 426 EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTT 483

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 484 PSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGG 541

Query: 195 HLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
            L+Y E                      ++  G+    S+  AVG + D ++RI SL PD
Sbjct: 542 ELIYFE----------------------VDMTGQLMERSRFLAVGSY-DNTIRILSLDPD 578

Query: 254 --LNLITKEHLGGEIIPRSVLLCAFEGIS------------YLLCALGDGHLLNFLLNMK 299
             + +++ + +     P S+L    +               +L   L +G L   +++M 
Sbjct: 579 DCMQILSVQSVSSP--PESLLFLEVQASVGGEDGADHPASLFLNAGLQNGVLFRTVVDMV 636

Query: 300 TGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHM 359
           TG+L+D +   LG +   L +   +    +   S RP + Y      L + ++ + +   
Sbjct: 637 TGQLSDARSRFLGLRAPKLFSVIVRGRRAMLCLSSRPWLGYIHQGHFLLTPLSYETLEFA 696

Query: 360 CPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAI 415
             F+S    + +       L + TI+ + +  +   IPL   PR+   Q + +   +
Sbjct: 697 ASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETVIPLRYTPRKFVLQPKRKLLVV 753



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 46/351 (13%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 488
            +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 822  IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 881

Query: 489  ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
            I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 882  IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 936

Query: 547  ECGHH---GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 603
            +C +      I++++  T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 937  KCENKLFPNTIVSIH--TYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASY 994

Query: 604  ILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 663
             +D D   GA+   N++ VR   +  +DE       V E   G  + ++  G L      
Sbjct: 995  HIDFDTMAGADKFGNIYFVRL-PQDVSDE-------VEEDPTGGKI-KWEQGKL------ 1039

Query: 664  SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
                  P  +   V   +G + +   +  L     + ++R+    + G +H  +RS    
Sbjct: 1040 ---NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGWRMHMRQEHPPLCGRDHMAYRS---- 1092

Query: 724  KKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                  K+ +DGDL E F    LDL R   DE+ +T      E+ K++EE+
Sbjct: 1093 -AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG----EILKKLEEV 1138


>gi|356505471|ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 210/496 (42%), Gaps = 67/496 (13%)

Query: 19  DAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI---N 75
           D +  Y+  ++   N+ PI+D  VVD   + Q Q+  C G   +GSLRI+RNGI +   +
Sbjct: 452 DGRLCYINPIQ---NIAPILDMEVVDYHDEKQDQMFACCGVAPEGSLRIIRNGINVENLH 508

Query: 76  EQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQ 135
             AS+  QG+ G W++R    D   +FLV+SF+ ETRIL++ L    + T+  GF     
Sbjct: 509 RTASI-YQGVTGTWTVRMRVTDSHHSFLVLSFVEETRILSVGLSFT-DVTDSVGFQPNVC 566

Query: 136 TLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
           TL C       LVQ+   +V+L   T             +S  +   +      A GGG 
Sbjct: 567 TLACGLVTDGLLVQIHKSTVKLCLPTKA----------AHSEGIPLPSVEIWYFAPGGG- 615

Query: 196 LVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLN 255
           +  +  G   LT      +            G  P   ++  VG       + + L  L 
Sbjct: 616 ITVVACGTISLTNTVGTAIS-----------GCVPQDVRLVFVG-------KYYVLAGLR 657

Query: 256 --LITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM--KTGELTDRKKV-- 309
             ++ +     E  P S        I+ +  AL   +L+N + N   K  +     ++  
Sbjct: 658 NGMLLRFEWPAEPCPSS-------PINIVDTALSSINLVNSVTNAFDKRNDFPSMLQLIA 710

Query: 310 --SLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF 367
              +G  P+ L          +   SDRP +++S+   L YS+++ +  +H+ P  S   
Sbjct: 711 IRRIGITPVFLVPLGDTLDADIITLSDRPWLLHSARHSLSYSSISFQPSTHVTPVCSVEC 770

Query: 368 PDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAE 425
           P  +    E  L +  +   ++L+++   L   PR++ + ++S+   +    L   +C  
Sbjct: 771 PKGILFVAENSLHLVEMVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCGTCLS 830

Query: 426 ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY------VLP 479
           +     + ++D  +   +S++ L+  E G S+       +  +   VGT+       +  
Sbjct: 831 D-----ICIMDPLSGSVLSSFRLELGETGKSMELVRVGSEQVLV--VGTSLSSGPHTMAT 883

Query: 480 EENEPTKGRILVFIVE 495
            E E  KGR+LV  ++
Sbjct: 884 GEAESCKGRLLVLCLD 899



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 17/201 (8%)

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            I VGD    I L  Y  E   +E    D +   ++   ++D D  + ++   ++  +  +
Sbjct: 1029 IAVGDCRDGILLYSYHEEAKKLELLYNDPSLRLVADCILMDADTAVVSDRKGSIAVLCSD 1088

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP---------TVI 673
                    +  + +   Y + E     + GS   RLP  DV   G  P         T+I
Sbjct: 1089 HLEDNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNVDSLQNTII 1148

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
              T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V    
Sbjct: 1149 ATTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENR---VGVPK 1205

Query: 732  FLDGDLIESFLDLSRTRMDEI 752
             LDGD++  FL+L+  +   I
Sbjct: 1206 ILDGDMLTQFLELTSMQQKMI 1226


>gi|358253751|dbj|GAA53701.1| splicing factor 3B subunit 3, partial [Clonorchis sinensis]
          Length = 726

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 136/269 (50%), Gaps = 20/269 (7%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TFY  P+ L  L          V+VLE   NL PI+ + + D   +   Q+    G    
Sbjct: 387 TFYFAPRALKNL--------IEVDVLE---NLSPIMHYHIADFANEDTPQLAVLCGRGPG 435

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE 121
            + R++R+G+ ++E A  +L G    +W+++ ++++ +D +++VSF++ T +L++   + 
Sbjct: 436 STFRLLRHGLEVSEMAKSDLPGNPNAVWTVKRNSEEEYDAYIIVSFVNATLVLSIG--ET 493

Query: 122 LEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
           +EE    GF   T TL C     + LVQV    +R + +  R   N W++P    +    
Sbjct: 494 VEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHIRADKRV--NVWRAPGKKMIVRCA 551

Query: 182 ANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
            N  QV++A  GG LVY E+   G L E  +  ++  ++ C+ +  I  +   S+  AVG
Sbjct: 552 VNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPADVICMALGRIPTSEQRSRFLAVG 611

Query: 240 MWTDISVRIFSL-PDLNLITKEHLGGEII 267
           +  D +VRI SL P ++ ++ E     ++
Sbjct: 612 L-ADNTVRILSLDPSVSRVSCERFSTPMV 639


>gi|340371789|ref|XP_003384427.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Amphimedon queenslandica]
          Length = 1408

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 130/575 (22%), Positives = 235/575 (40%), Gaps = 82/575 (14%)

Query: 273  LCAFEGISYLLCALGDGHL-LNF--------LLNMKTGELTDRKKVSLGTQPITLRTFSS 323
            L  +E   Y   A+  GHL L F        L + + G+L    +    + P  LR FS+
Sbjct: 838  LVIYEAFQYT-SAIHPGHLKLRFSKVQHNVILQDKRVGKLAKHFQQQEFSFPPHLRKFSN 896

Query: 324  -KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDS-LAIAKEGEL 379
                + VF     P  I+ + +  L  +    +  V    PF++   P   L   KE EL
Sbjct: 897  IAGYSGVFVCGPYPHWIFMAARGHLSIHPMYIDGPVQSFAPFDNVNCPSGFLYFNKESEL 956

Query: 380  TIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA----------- 424
             I  +           +R +PL   P  + +  +S+   I +   Q              
Sbjct: 957  RISVLPTQLSYDSYWPVRKVPLKATPHFVGYHMESKVHVIIASTPQPVTVIPDPNGETED 1016

Query: 425  -------------EESEMHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV- 468
                          + E ++++LL   ++E I  S Y ++   +   +          + 
Sbjct: 1017 ALETVERDGRFVYSQEETYYLQLLSPTSWETIPHSKYEMEAHYHVTDMKVMRLRSQETLS 1076

Query: 469  ----YYCVGTAYVLPEENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYS 513
                Y  VGT     EE    KG++L+F     I E GK      L+ + ++E K  V  
Sbjct: 1077 GRKEYIVVGTMATFGEELS-AKGKVLIFDVSVVIPEPGKPFSQYRLKNLYDQEQKWPVTG 1135

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
            L   NG +L A+ QKI  + W  +D+  ++L +             Q+   FI+ GD+ +
Sbjct: 1136 LECVNGLILTAMGQKI--FMWQFKDN--KDLLAVAFIDAETYIHTAQSIKGFILTGDVTR 1191

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGAT 630
            SI LL Y  +  ++   ++D N   + +   + D   LG   ++++ N+   +   E   
Sbjct: 1192 SIQLLHYNEDRRSLSLISQDPNPMEVFSTTFMIDGKALGFLVSDSDRNITLFQYQPENPA 1251

Query: 631  DEERGRLEVVGEYHLGEFVNRFRH----------GSLVMRLPDSDVGQIPTVIFGTVNGV 680
                  L   G+ H+G  VN F +           S  M++  +D  Q     FGT++G 
Sbjct: 1252 SSGGANLVRCGDIHVGSLVNVFLNIRCKTSAGLGASREMKIALADKRQ--CTFFGTLDGG 1309

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLI 738
            IG +  +P + Y  L  LQ  + + ++ + GLN + +R+F    + +    +N LDG L+
Sbjct: 1310 IGCLLPIPEKVYRRLSMLQVKMTQGMRHMAGLNPKAFRTFQTRHQYLHNAQRNILDGTLL 1369

Query: 739  ESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +L L+     + SK +  +V ++ + ++E+ ++
Sbjct: 1370 YQYLSLTAKEKFDFSKQIGTTVAQIMEDLKEIDKV 1404


>gi|427795803|gb|JAA63353.1| Putative mrna cleavage and polyadenylation factor ii complex
           subunit cft1 cpsf subunit, partial [Rhipicephalus
           pulchellus]
          Length = 726

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 211/507 (41%), Gaps = 76/507 (14%)

Query: 329 VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 385
           VF    RP  ++ S++  L  +    +    C  PF++   P   L   K+GEL I T+ 
Sbjct: 224 VFLCGYRPYWLFMSSRGELRCHPMFVDGPIHCFAPFHNVNCPKGFLHFNKQGELRISTLP 283

Query: 386 DI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEMHFVR- 433
                     +R +PL   P  + +   S+T+ + + +   C        EE E   +  
Sbjct: 284 THLTYDAPWPVRKVPLRCTPHFVNYHVDSKTYCVVTSQPDPCNHLVRFTGEEKEYELLER 343

Query: 434 -------LLDDQTFEFIS-----TYP-----LDTFEYGCSILSCSFSDDSNV-----YYC 471
                   +D  + + +S     T P     LD +E+   + +   S +        Y  
Sbjct: 344 DSRYIFPTMDKFSLQLLSPVSWETIPNTRVDLDEWEHLTCLKNVMLSSEGTTTGMKGYLA 403

Query: 472 VGTAYVLPEE--------------NEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAF 517
           +GT Y   E+                P  G+ L       K++++  KE KG V +L+  
Sbjct: 404 LGTNYCYGEDVTSRGRIIILDIIDVVPEPGQPLT----KNKIKIVYSKEQKGPVTALSQV 459

Query: 518 NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            G LL+AI QKI  Y W L+D+   EL         I    V T  + I+VGD+ KS+SL
Sbjct: 460 VGFLLSAIGQKI--YIWQLKDN---ELVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 514

Query: 578 LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 632
           L Y+     +   +RD     + AVE   D+  +      AE N  L+  +  S  +   
Sbjct: 515 LRYQEASRTLSLVSRDVRPLEVYAVEFFIDNTQMSFLVTDAERNLLLYMYQPESRESCGG 574

Query: 633 ERGRLEVVGEYHLGE-----FVNRFRHGSLVM--RLPDSDVGQIPTVIFGTVNGVIGVIA 685
           +R  L   G++H+G      F  + R G +    R   S V      +  T++G +  + 
Sbjct: 575 QR--LLRRGDFHVGSPVVSMFRIKCRMGDIAKYDRRAASIVDGRHITMMATLDGSLAYVL 632

Query: 686 SLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLD 743
            +P + Y  L  LQ  L   I    GLN + +R + ++++ +    KN LDG+LI  F+ 
Sbjct: 633 PVPEKTYRRLLMLQNVLVTNIPHYAGLNPKAYRMYYSQRRFLGNPHKNILDGELIWKFMH 692

Query: 744 LSRTRMDEISKTMNVSVEELCKRVEEL 770
           LS     E+SK +  +V ++   + E+
Sbjct: 693 LSFMERSELSKKIGTTVTQITDDLLEI 719


>gi|72390667|ref|XP_845628.1| damage-specific DNA binding protein [Trypanosoma brucei TREU927]
 gi|62359843|gb|AAX80271.1| damage-specific DNA binding protein, putative [Trypanosoma brucei]
 gi|70802163|gb|AAZ12069.1| damage-specific DNA binding protein, putative [Trypanosoma brucei
            brucei strain 927/4 GUTat10.1]
          Length = 1270

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 178/800 (22%), Positives = 313/800 (39%), Gaps = 127/800 (15%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            N GP+ D  V       +  V+  +G   +G L  VR+ + + +   + + G++ +  + 
Sbjct: 426  NCGPVFDVTVA--ADGSRTSVIAGTGVGLNGGLSFVRSAVSVRQD--IRVTGLQNVRQIS 481

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
             S D      ++ S    +R+    + +   LEE     F ++   L  ++   N  +QV
Sbjct: 482  VSEDT-----IIFSLPGYSRVCRYCVGETMVLEEIHNTFFGTEETLLLEYNNERNVFLQV 536

Query: 151  TSGSVRLVSSTSRELRNEWKSPPGYSV-----NVATANASQVLLATGGGHLVYLEIGDGI 205
            T+            LRN W     Y +     ++  A+AS+ LL       +Y+      
Sbjct: 537  TTAG----------LRNVWPDRGEYVIRVINNDIGHAHASEGLLVFSNPANLYV-FCMKT 585

Query: 206  LTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGE 265
            LT V    L   ISCL +         S    VG W   +V ++ L D  + +K  L   
Sbjct: 586  LTPVATLCLADAISCLLV-------FSSSSLLVGTWGSCAVHLYELHDGMIQSKVILQCS 638

Query: 266  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMK--TGELTDRKKVSLGTQPITLRTFSS 323
              P S+ +    G   LL  L +G++ +  ++     GE+ +     L TQP+  R F+ 
Sbjct: 639  ATPCSMCVVFHSGGHRLLVGLHNGYVADVPISGANVCGEMVETM---LTTQPV--RLFNL 693

Query: 324  KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE--LTI 381
            ++   V    + P ++  +N     + ++ ++VS          P       + E  L +
Sbjct: 694  ESHAAVLCLGEIPLILIVTNTGFQLTGIDFRDVSACAIMPKMRSPSRYIFFSKSECALIL 753

Query: 382  GTIDDIQKLH------------IRSIP----LGEHPRRICHQEQSRTFAICSLKNQSCAE 425
            G+I  +QKL+            ++ +P    L    RRI  ++Q  +     + N S   
Sbjct: 754  GSITSVQKLNTDYVGLKATATCVKYMPWWNVLVLSIRRI-EKDQVVSTMGHEVSNLSVLL 812

Query: 426  ESEMHFVRLLDDQTFEFISTYPL-DTFEYGCSILSCS-FSDDSNVYYCVGTAYVLPEENE 483
            +    F  LL+++   FI    L    E+G    SC   + D+ V   +GT +V P+E  
Sbjct: 813  DEPNSF-ELLENERCAFIDCVALGQANEWG----SCGEVASDAGVVL-IGTTFVFPDEQL 866

Query: 484  PTKGRILVFIVEDGKLQ-------LIAEKETKGAVYS---LNAFNGKLLAAINQKIQLYK 533
                R +   VE  KL+       L   K+ +GA+     +  + G++   I   + LY 
Sbjct: 867  SRSSRFMWCTVEVAKLRTEKTLLRLQGSKDVEGALQCCCIVPNYAGRVALGIGGCVVLYS 926

Query: 534  WMLRDDG-TRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
            W   D     E   + G     L   +Q    +IV  D   S   +     +G++   AR
Sbjct: 927  WNAADATFVAEETIQIGTLIVRLIPVMQKEVSYIVASDARHSCFFVRIDTIQGSLNIVAR 986

Query: 593  DYNANWMSAVEILD----DDIYLGAENNFNLFTVR-----KNSEG--ATDEERGRLEVVG 641
            D     +    IL      D+ LG ++ FN F V       NS G  A      +L+   
Sbjct: 987  DPELRGVMDCAILQYESRHDVCLG-DDLFNFFCVSHVEPLANSSGVSAPAMPTKKLQTTA 1045

Query: 642  EYHLGEFVNRFRHGSL--------VMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQ 691
            +YH+G+ +     GS         V+ +P + V  +  P +++GT +G  G I  +  E 
Sbjct: 1046 QYHMGDLITVMHQGSFAPCSVLNDVVPIPATLVRGVCGPQIVYGTSHGAFGAITPISSET 1105

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRS--------------------------FNNEKK 725
            ++ L+ L+ ++  V+  +GG  H  +R                           FN  ++
Sbjct: 1106 FILLKGLEVSVASVVPPLGGFTHASFREVLRVGQERGASRNASFQVTNPQATELFNRRRR 1165

Query: 726  TVDAKNFLDGDLIESFLDLS 745
                +    GD++E FL LS
Sbjct: 1166 RCVPRGVCCGDVVEMFLTLS 1185


>gi|388579257|gb|EIM19583.1| hypothetical protein WALSEDRAFT_33953 [Wallemia sebi CBS 633.66]
          Length = 986

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 175/368 (47%), Gaps = 22/368 (5%)

Query: 282 LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYS 341
           +L    DG L  F  +     + D + V++G+ P+ L   +  N   +FA  D P+++  
Sbjct: 549 VLAGSADGSLYAFRFDEHLKSV-DIQTVAIGSTPVCL---TRSNDGLIFALCDVPSIVTL 604

Query: 342 SNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQ-KLHIRSIPLG-E 399
            N +L YS++N+  ++ +  + +    + + +  + +L    I   + ++HI SI +G +
Sbjct: 605 DNTRLRYSSININYINGLTSYKTNDMVNYVFVQND-QLKFSRILSTENRVHIHSIEMGAD 663

Query: 400 HPRRICHQEQSRTFAICSLKNQSCAEES---EMHFVRLLDDQTFEFISTYPLDTFEYGCS 456
            PR++ ++E    +A+  ++N   ++ +       V+LLD+  +E ++   ++  E    
Sbjct: 664 VPRQVAYKEDR--YAVGCVRNAYRSDRTLYESSSCVKLLDNN-YEQLAQMEMEKDEIVSV 720

Query: 457 ILSCSFSDDSNVYYCVGTAYVLPEEN--EPTKGRILVFIVEDGKLQLIAEKETKGAVYSL 514
           + S S ++     + VGT Y    E   E TKGR ++ +V+D K  + +     G VY++
Sbjct: 721 VESLSIANME--VFVVGTYYNNETEGTEEATKGRFIILLVKDDKFIIASSFLVPGCVYAV 778

Query: 515 NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
              + KL  A+N ++++Y      D T +++    +    + + + + G  +VV D +KS
Sbjct: 779 CGIDQKLAVAVNYQVRVYDIESIRDDTYKMRFIASYGNAFVVVSLTSVGKILVVADFLKS 838

Query: 575 ISLLIYKHEEGAIEERARDYNANWMSAVEILDDD-----IYLGAENNFNLFTVRKNSEGA 629
              L    E GA+ +   D    W S V  LDD        LGA+  F+LF + + S G 
Sbjct: 839 AIYLQLDTERGALTQVGYDTAQRWSSLVVALDDGNEETFTTLGADIRFHLFALDRTSSGI 898

Query: 630 TDEERGRL 637
           T     +L
Sbjct: 899 TSRTLAQL 906



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 10/87 (11%)

Query: 28  LERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGIK 86
           LE Y NL P+ D  +   +   QGQ+V CSG+ K G LR+V  GIG+ +   V L   I 
Sbjct: 321 LENYTNLAPVSDMALTHPDGI-QGQLVVCSGSNKTGKLRVVTTGIGLCDIYQVGLGDSIS 379

Query: 87  GMWSLRSSTDDPFDTFLVVSFISETRI 113
            ++ L S         L+VS++S T+I
Sbjct: 380 NVFILGS--------HLLVSYLSTTKI 398


>gi|17861814|gb|AAL39384.1| GM01240p [Drosophila melanogaster]
 gi|220943184|gb|ACL84135.1| CG13900-PB [synthetic construct]
          Length = 688

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 137/664 (20%), Positives = 258/664 (38%), Gaps = 122/664 (18%)

Query: 209 VKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIP 268
            + +++  EI C+ +  + E    S   AVG+  D +VRI SL   N +T   +     P
Sbjct: 39  TERSEMPAEIMCMALGTVPEGEQRSWFLAVGL-ADNTVRILSLDPNNCLTPCSMQALPSP 97

Query: 269 RSVLLCAFE-------------------------GISYLLCALGDGHLLNFLLNMKTGEL 303
              L C  E                         G  YL   L +G LL  +L+  +G+L
Sbjct: 98  AESL-CLVEMGHTESTTQGGLDDDAPAQRSGNNKGTIYLNIGLSNGVLLRTVLDPVSGDL 156

Query: 304 TDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFN 363
            D +   LG++P+ L     + +  V A S R  + Y    +   + ++ + + +   F+
Sbjct: 157 ADTRTRYLGSRPVKLFRIKMQGSEAVLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFS 216

Query: 364 SAAFPDSLAIAKEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSR---------- 411
           S    + +       L I  ++ +  +  + + PL   PR  + H +  R          
Sbjct: 217 SEQCSEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRTFVIHPDTGRMLIAETDHNA 276

Query: 412 -TFAICSLKNQSCAEE-------------SEM-------------------------HFV 432
            T    S + +  AEE              EM                           +
Sbjct: 277 YTEDTKSARKEQMAEEMRSAAGDEERELAREMANAFINEVLPEDVFSSPKAGLGLWASQI 336

Query: 433 RLLDDQTFEFISTYPLDTFE--YGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRIL 490
           R LD    + + + PL   E     ++L  S + D   Y  VG A  L      ++G  +
Sbjct: 337 RCLDAMHGQTMFSVPLTQNEAIMSMAMLKFSIAADGRYYLAVGIAKDLQLNPRISQGGCI 396

Query: 491 -VFIVED--GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            ++ ++     L+ +   +      +L  F G+LLA   + +++Y     D G +++  +
Sbjct: 397 DIYKIDPTCSSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIY-----DFGKKKMLRK 451

Query: 548 C-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
           C   H     + +Q  G  + V D+ +S+  + Y+  E  +   A D +  W++A  +LD
Sbjct: 452 CENKHIPYQIVNIQAMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLD 511

Query: 607 DDIYLGAENNFNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGE 647
            D  +   + F   ++++     TD+            +RG L       E +  +H+GE
Sbjct: 512 YDT-IAIADKFGNLSIQRLPHSVTDDVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGE 570

Query: 648 FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVI 706
            +   +  +L+        G    +I+ T++G +G        E Y F + L+ ++R   
Sbjct: 571 IIMSLQKATLI-------PGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNEN 623

Query: 707 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
             + G +H  +RS          KN LDGDL E +L +   +   I+  M  +  ++CK+
Sbjct: 624 PPLCGRDHLSYRS-----SYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKK 678

Query: 767 VEEL 770
           +E++
Sbjct: 679 LEDI 682


>gi|158287218|ref|XP_309311.4| AGAP011340-PA [Anopheles gambiae str. PEST]
 gi|157019545|gb|EAA05261.4| AGAP011340-PA [Anopheles gambiae str. PEST]
          Length = 1434

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 213/484 (44%), Gaps = 73/484 (15%)

Query: 347  LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIG------TIDDIQKLHIRSIPLGE 399
            LY+   +K  +   PFN+   P+  L   ++ EL I       + D +    +R IPL  
Sbjct: 957  LYARTVMKAFA---PFNNVNCPNGFLYFDEQYELKISIFPTYLSYDSVWP--VRKIPLRS 1011

Query: 400  HPRRICHQEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLD 436
             P++I +  +++ + +     + C        E+ E+                  V L+ 
Sbjct: 1012 SPKQIVYHRENKVYCVVMDAEEICNKYYRFNGEDKELTEENKGERFLYPMGHRFSVVLVT 1071

Query: 437  DQTFEFI--STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRI 489
               +E +  ++  L+ +E+  ++ + S + +        Y  VGT +    E+  ++GR+
Sbjct: 1072 PAAWEVVPETSINLEEWEHVIALKNVSLTYEGARSGLKEYIAVGTNFNY-SEDITSRGRL 1130

Query: 490  LVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            L++     + E GK       + +  K+ KG V +++   G L+ A+ QK+  Y W ++D
Sbjct: 1131 LLYDIIEVVPEPGKPLTKHKFKEVIVKDQKGPVSAISHVCGFLVGAVGQKV--YLWQMKD 1188

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            D   +L        +I    + +    I+V D+ KS+SLL ++ E   +   +RDY+   
Sbjct: 1189 D---DLVGVAFIDTNIFVHQMVSIKSLILVADVYKSVSLLRFQEEYRTLSVVSRDYHPLN 1245

Query: 599  MSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN----- 650
            +  VE + D+  LG   +++  NL T     E        RL    +YHLG+ VN     
Sbjct: 1246 VFQVEYVVDNANLGFLVSDDQCNLITYMYQPESRESFGGQRLLRKSDYHLGQQVNCMFRV 1305

Query: 651  --RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 708
               F    ++ R  + D     T  F T++G IG +  LP + Y  L  LQ  L      
Sbjct: 1306 QCDFHETDVMKRTLNYDNKH--TTFFATLDGGIGFVLPLPEKTYRRLFMLQNVLLTHSPH 1363

Query: 709  VGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
              GLN + +R+    +K     ++  +DGDL+ SFL+L      E++K +   +EE+C  
Sbjct: 1364 TCGLNPKAYRTIKQTRKLPINPSRCVVDGDLVWSFLELPANEKHEVAKKIGTRIEEICAD 1423

Query: 767  VEEL 770
            + E+
Sbjct: 1424 LMEI 1427



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 27/169 (15%)

Query: 23  SYV-EVLERYVNLGPIVDFCV------VDLERQGQGQ---------VVTCSGAYKDGSLR 66
           SY+ EV +  +N+GPI    V       D E Q   Q         VVT SG  K+G+L 
Sbjct: 450 SYIFEVCDNVLNIGPIAHMAVGERVAEEDAENQPDVQIVQNKLDIEVVTSSGHGKNGALC 509

Query: 67  IVRNGIGINEQASVELQGIKGMWSL------RSSTDDP-FDTFLVVSFISETRILAMNLE 119
           ++++ I      S  L G   +W++      R + D P    F+++S   E   + +   
Sbjct: 510 VLQSSIKPQVITSFGLSGCVDVWTVFDEAVARRAEDGPSTHAFMILS--QEGGTMVLQTG 567

Query: 120 DELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRN 167
           +E+ E E  GF +   T+   +   N+ +VQVT+ S+RL+  T R L+N
Sbjct: 568 EEINEIENTGFATTVPTIHVGNIGTNRFIVQVTTKSIRLLQGT-RLLQN 615


>gi|448528339|ref|XP_003869702.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis Co 90-125]
 gi|380354055|emb|CCG23569.1| hypothetical protein CORT_0D07360 [Candida orthopsilosis]
          Length = 1170

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 167/757 (22%), Positives = 301/757 (39%), Gaps = 119/757 (15%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +++ ++S +   D +LV++     + L ++L + +EE     F     T+       + +
Sbjct: 453  IFTTKTSANAVDDEYLVITSTLSFKTLVLSLGEVIEEVNDSEFVLDQPTVAVQQVGKSSI 512

Query: 148  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILT 207
            VQ+ S  +R ++   +     W  P G +V  AT N  QV L      LVY E  D    
Sbjct: 513  VQIYSNGLRHINGNKK--VTNWYPPAGITVTHATTNNQQVFLGLSNLELVYFET-DPDDD 569

Query: 208  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG--E 265
            +++  Q   E+S   I  +  +   S  A VG  +D ++ + SL   N +  + L     
Sbjct: 570  QLREYQDRLEVSS-PIRSMCISKEQSSFAVVGC-SDETISVISLQRQNCLQVKSLQALSS 627

Query: 266  IIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SK 324
                 ++L    G + +   + +G  +   ++   G+L+D +   LG +P+TL     S 
Sbjct: 628  SANSLIMLTHKPGTTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELKLSD 687

Query: 325  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGE----LT 380
            +   V A S +P + Y    K   + +   ++ +   F S        +   G+     +
Sbjct: 688  DIIGVLAISSKPWIGYFHQGKYRCTPLLDIDIINGAFFKSEDIGGDGIVGIHGDNLVIFS 747

Query: 381  IGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTF----------------------- 413
            +G  D +    Q+  +  + L   PR+I   +  + F                       
Sbjct: 748  VGKEDSLFDPNQEFTVTELNLRYTPRKIVKGDDGKLFVSEVELGIKTPYLSNLTKEVEDT 807

Query: 414  -------AICSLKNQSCAEESEMHFVRLLDD----QTFEFISTYPLDTFEYGCSILSCSF 462
                   A    ++  CA       V+L+ D    QT EF+    +        ++   F
Sbjct: 808  VDPEYYEAFGYERDSGCAS-----CVQLVQDGEIKQTLEFVKNQRI------VDMIKIQF 856

Query: 463  SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKL 521
              + N+Y  VG      E+N      +  F ++  K LQ I + E K    ++  F  +L
Sbjct: 857  --NKNLYLVVGVTK--HEDN-----LLYTFKIDKKKNLQYIHKTELKYVPQTMEVFQDRL 907

Query: 522  LAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            L A    I LY    + +LR   TR           I+ +  Q R D I++ D   SI  
Sbjct: 908  LVASGNSISLYELGQRQLLRKSLTR-----IDFIQTIVKVTPQPR-DRILLADSANSIVF 961

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG-- 635
              +  EE      A D     ++A + LD D  +G +   N+F  R + E +   ++   
Sbjct: 962  AKFDQEENQFVSMADDTVKRNITAWKQLDYDTVIGGDKFGNIFVSRLDREESKQIDQNWT 1021

Query: 636  -----------------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
                             +L+ + EY++ + +  F+ GS        ++G    +I+  + 
Sbjct: 1022 VLKQAAKNSPNLNSCVYKLQNLCEYYIPDIITSFQLGSF-------NLGGEECIIYTGLT 1074

Query: 679  GVIGVIASLPHEQYL-FLEKLQTNLR----KVIKGVGGLNHEQWRSFNNEKKTVDAKNFL 733
            G IG++  L  +  +  L  LQ  +     KV   V G NH + RS+ N      AKN  
Sbjct: 1075 GTIGILLPLISKSEIELLHDLQLEISAYNDKV--NVAGKNHAKLRSYYNP-----AKNIF 1127

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DGD +E +L+L      +I+K +N SV E+ K++ ++
Sbjct: 1128 DGDFLELYLNLPLDEKLKIAKRLNKSVGEVEKKLNDI 1164


>gi|350413821|ref|XP_003490124.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Bombus impatiens]
          Length = 1417

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 233/525 (44%), Gaps = 76/525 (14%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 899  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 958

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 419
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 959  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1018

Query: 420  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 459
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1019 SYYRFNGEDKEFTEEERPERFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1078

Query: 460  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIA 503
             S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + + I 
Sbjct: 1079 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1137

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 560
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1138 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1191

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 615
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1192 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1249

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 670
            N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D          
Sbjct: 1250 NMALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIKCRVSDPANDKKHFSGADKR 1307

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV-- 727
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T   
Sbjct: 1308 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQGN 1367

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
             A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1368 PARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1412



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 14/172 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 566

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 567 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 624

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G ++ L + +G  T   H Q
Sbjct: 625 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTAKLHVQ 674


>gi|71663721|ref|XP_818850.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
           Brener]
 gi|70884123|gb|EAN96999.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 774

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 161/710 (22%), Positives = 271/710 (38%), Gaps = 144/710 (20%)

Query: 145 NQLVQVTSGSVRLVSSTSRE---LRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
           N  VQVTS  V  V          +NE      + +  A+A+A+  LL       V +  
Sbjct: 28  NTFVQVTSVGVNFVKGGKGVYIICKNE------FGIQHASADANLRLLVFSSSRFVSVV- 80

Query: 202 GDGILTEVKHAQLEY--EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 259
              + T    A LE   E+SCL I       S SQ   +G W   +V ++ + D      
Sbjct: 81  --DLNTHHTRASLELDNEVSCLVI-------SSSQGFVIGEWNSGAVCLYEVQD------ 125

Query: 260 EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTD-----------RKK 308
               GEI+ +  + C+    S  +C L   H    ++ +  G + D            ++
Sbjct: 126 ----GEILLKGRIFCSATSCS--MCILSHLHTPRLVVGLLNGYIADISLESMLMGSAARE 179

Query: 309 VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
             +  QP+ L    S N   V    + P +I   +     + ++  +V+  C     +  
Sbjct: 180 TFIRMQPVQLFNLESHNA--VLCLGEVPLIIILCDTGFQLTGIDFNDVA-ACAIIEGSHI 236

Query: 369 DSLAI---AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ---- 421
            S  I     E  L  G I D++KL+   + L     R+ +      F +   +N+    
Sbjct: 237 SSKYIFLSQSENSLAFGNIVDLKKLNSCFLGLKATVTRVKYIAWWNVFVMSVRRNEKDQI 296

Query: 422 ----------SCAEESEMHF----VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN 467
                     S   ++E+      + LL ++   F  T  L     G +        D +
Sbjct: 297 LLLMGHELANSWVPQNELLIELFSIELLGNERCVFFETVVLG----GSNESPNGNEADKD 352

Query: 468 VYYCVGTAYVLPEENEPTKGRILVFIVEDGKL-----QL--IAEKETKGAVYS---LNAF 517
               +GT +  P+E  P   R + + VE GKL     QL  I  K+ +GA+     +  +
Sbjct: 353 KAILLGTTFAFPDEQLPRSSRFIWYSVEQGKLISERPQLRQIGSKDVEGALQCCCIVPNY 412

Query: 518 NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSI 575
            G++   IN  I LY W   D      ++ C       +L ++ Q    ++V  D   S 
Sbjct: 413 VGRIALGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSC 471

Query: 576 SLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY-LG-------AENNFNLFTVRK--- 624
             +     +G++E  ARD          ++D  ++ LG        ++ +N F + +   
Sbjct: 472 FFIQVDTFQGSLEIVARDSEPR-----GVMDGTVFQLGNIYNICFGDDYYNFFCLSRGAS 526

Query: 625 ------NSEGATDEERGRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI- 669
                 N+  AT    G+LE   +YHLG+ V   + GS        + + +P + +  I 
Sbjct: 527 TLPSASNATSATVSS-GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGIC 585

Query: 670 -PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS--------- 719
            P V+FGT +G  G I  + +E YL L+ L+  +  V+  +GG  H  +R          
Sbjct: 586 GPQVVFGTSHGAFGTITPVSNETYLLLKALEVAVSSVVPALGGFEHVTYREVLRAGQERG 645

Query: 720 -----------------FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
                            F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 646 YSRNASFENANVVSSGVFDKRRKRYLSRCVCSGDLIESFLTFSQTIQQRI 695


>gi|110750698|ref|XP_624382.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Apis mellifera]
          Length = 1415

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 236/527 (44%), Gaps = 80/527 (15%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 419
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1016

Query: 420  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 459
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1017 SYYRFNGEDKEFTEEERPDRFIFPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1076

Query: 460  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIA 503
             S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + + I 
Sbjct: 1077 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1135

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 560
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1136 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1189

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 615
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1190 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1247

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVG 667
            N  LF  +  S  +   +  +L    ++HLG+ VN F    +  R+ D        SD  
Sbjct: 1248 NIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFR--IRCRISDPANDKKHFSDAD 1303

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            +    ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T 
Sbjct: 1304 KRHVTMYASLDGNLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQ 1363

Query: 728  --DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
               A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1364 GNPARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1410



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L ++++ I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 564

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTARLHAQ 672


>gi|350645868|emb|CCD59413.1| Splicing factor 3B subunit 3, 5' fragment [Schistosoma mansoni]
          Length = 1073

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 33/343 (9%)

Query: 99  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 158
           +D +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R +
Sbjct: 433 YDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 159 SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEY 216
            S  R   N W++P   ++     N  QV++A  GG LVY E+   G L E  +  ++  
Sbjct: 491 RSDKRV--NVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPA 548

Query: 217 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCA 275
           ++ C+ +  I  N   S+  AVG+  D +VRI SL   + +T   + G  IP +   LC 
Sbjct: 549 DVICMALGRIPANEQRSRFLAVGL-ADNTVRILSLDPSDCLTPLTMQG--IPSTPESLCI 605

Query: 276 FE---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
            E                     GI Y+   L +G LL  +L+  TGEL+D +   LGT+
Sbjct: 606 VEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTR 665

Query: 315 PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
           P+ L     +    V + S R  + Y+   +     ++ + + +   F+S   P+ +   
Sbjct: 666 PVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAI 725

Query: 375 KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAI 415
               L I  ++ +  +  + S PL   PR+ + H + + T+ I
Sbjct: 726 CNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYII 768


>gi|53791734|dbj|BAD53405.1| UV-damaged DNA-binding protein-like [Oryza sativa Japonica Group]
          Length = 154

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 64/92 (69%), Gaps = 7/92 (7%)

Query: 584 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
           +G  +E +RDYN  WM+AVE+LDD +Y+GA+N +NLFTV K          GRL V+G+Y
Sbjct: 62  KGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTVLK-------RRVGRLLVIGQY 114

Query: 644 HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
           HLG+ VNRF  G LVM+ P S+V QIP  IFG
Sbjct: 115 HLGDLVNRFHQGPLVMQDPGSEVDQIPAFIFG 146


>gi|209875989|ref|XP_002139437.1| spliceosomal protein SAP 130 [Cryptosporidium muris RN66]
 gi|209555043|gb|EEA05088.1| spliceosomal protein SAP 130, putative [Cryptosporidium muris RN66]
          Length = 1300

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 185/428 (43%), Gaps = 49/428 (11%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSL 91
           +L PI+D  + D   +   Q+    G     +LRI   G  + E A   L G  + +W+L
Sbjct: 401 SLSPIIDMKIADSSGEFGPQIYVACGRGPRSTLRICTYGKAVEEMAETPLPGRPRFIWTL 460

Query: 92  RSS---------------TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQT 136
           +                  +  + +F+++SFI  T +L++   +++EE     F     T
Sbjct: 461 KKGGTSYILNKETSETLEDEGNYHSFIIISFIDRTLVLSVG--EQVEEISDSPFTLSEST 518

Query: 137 LFCHDA-IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH 195
           ++     + N  +Q+    V+L++    E   EWK+P G  +  A +N  Q+ LA  GG+
Sbjct: 519 IYASSMELKNSYLQILETYVKLIT---EEKIYEWKAPDGRHIVAADSNGRQISLALSGGY 575

Query: 196 LVYLEIG--DGI---------LTEVKHAQLEYEISCLDINP-IGENPSYSQIAAVGMWTD 243
           +V LE+   D I         LTE+ H ++ Y+I C+ I   I       +  AVG  TD
Sbjct: 576 IVILEMNTIDLISGTTNSIMGLTELCHREVSYDIICISIQQLIYPTKLCREYVAVGTSTD 635

Query: 244 ISVRIFSL--PDLNL---ITKEHLGGEIIPRSVLLCAFEGIS---YLLCALGDGHLLNFL 295
            SVR++ +   D  L    T+       IP +++L    G++   YLL  L +G LL  +
Sbjct: 636 NSVRVYWINTADKKLKQTSTQVMPNASSIPENIVLYK-PGLNDSLYLLIGLNNGVLLCCI 694

Query: 296 LNMKTGELTDRKKVSLGTQPITLRT--FSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL 353
           ++   G L+D +   LG + I +        N    F  ++RP ++  + + L Y  +  
Sbjct: 695 VDELNGTLSDNRSRFLGGKSIKMVRVGIGEYNKLSTFCMANRPWIVNHNGRSLNYIPIQY 754

Query: 354 KEVSHMCPFNSAAFPDSLAIAKEGELTIGTI--DDIQKLHIRSIPLGEHPRRICHQEQSR 411
           + +  + PF++  F +         L I  +  DD        I L   PR++      +
Sbjct: 755 RTLDTVAPFHTKQFKNGFVAVSGTTLVIFQVLYDDSGTFTHSIIKLNYTPRKLLFLPPPQ 814

Query: 412 TFAICSLK 419
            F  C L+
Sbjct: 815 LF--CGLE 820



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 43/349 (12%)

Query: 448  LDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP-----EENEPTKGRILVFIVEDGK--LQ 500
            LD  E   S   C F +       VGT Y +       EN  T G  +     D    L+
Sbjct: 964  LDVNEGCISACVCKFDEMDLPCLVVGTTYGMKLRKEYNENSSTLGATIKVYNYDTNFNLK 1023

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL-YV 559
            L+     +     +  + G+LL +IN+ +++Y       G ++L  +C +      L ++
Sbjct: 1024 LVHVTPIENVATCMIGWRGRLLVSINKTLRIYSL-----GKKKLLKKCEYRNIPEVLVWL 1078

Query: 560  QTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM-SAVEILDDDIYLGAENNFN 618
            +   D I  GD+   + +  Y   +  +   A D    W+ SA EILD    + ++   N
Sbjct: 1079 KVINDRIFAGDIRHGVIIFKYHSVQNRLSIIANDIMPRWLTSACEILDYHTVITSDKFDN 1138

Query: 619  LFTVRKNSEGATDEERG----------------RLEVVGEYHLGEFVNRFRHGSLVMRLP 662
            L   R  +E +++ +                  ++  V  +H+G+ V       L     
Sbjct: 1139 LIVCRVPTEASSNYDFTSNFNSQTNTSSYMKPYQINPVAHFHVGDLVTCIHKNQL----- 1193

Query: 663  DSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S +G + T+IFGT+ G IG +  + ++  +  L KL+  LR     +   +H  +RS+ 
Sbjct: 1194 -SPLG-VETLIFGTILGSIGTLTPITNKDDVDLLCKLELLLRNESPSLMSRDHLMFRSY- 1250

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                     N +DGDL E+F   S      I+ ++++S++E+ K++++L
Sbjct: 1251 ----YAPVLNVIDGDLCETFTSYSSDVQARIASSLDISIQEIFKKLDDL 1295


>gi|340710064|ref|XP_003393618.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Bombus terrestris]
          Length = 1417

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 126/525 (24%), Positives = 232/525 (44%), Gaps = 76/525 (14%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 899  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 958

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 419
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 959  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1018

Query: 420  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 459
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1019 SYYRFNGEDKEFTEEERPERFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1078

Query: 460  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIA 503
             S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + + I 
Sbjct: 1079 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1137

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 560
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1138 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1191

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 615
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1192 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1249

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 670
            N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D          
Sbjct: 1250 NMALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIRCRLSDPANDKKHFSGADKR 1307

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV-- 727
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T   
Sbjct: 1308 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQGN 1367

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
             A+  +DGDL+  +  L      +++K +   V+E+ + + E+ R
Sbjct: 1368 PARGIIDGDLVWRYFYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1412



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 507 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 566

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 567 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 624

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 625 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTAKLHAQ 674


>gi|91078626|ref|XP_968117.1| PREDICTED: similar to cleavage and polyadenylation specificity factor
            cpsf [Tribolium castaneum]
          Length = 1413

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 228/526 (43%), Gaps = 82/526 (15%)

Query: 316  ITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNL--KEVSHMCPFNSAAFPDS-L 371
            I +R F++      VF     P  I+ S +  L ++      EV     FN+   P   L
Sbjct: 898  IKMRYFTNIAGYNGVFVCGANPHWIFMSARGELRTHPMTIDGEVLSFAAFNNVNCPQGFL 957

Query: 372  AIAKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEES 427
               ++ EL IG +           +R +PL   P  + +  +S+T+ + +    S AE S
Sbjct: 958  YFNRKSELRIGVLPTHLSYDAAWPVRKVPLRCTPHFVTYHLESKTYCLVT----SIAEPS 1013

Query: 428  EMHF---------------------------VRLLDDQTFEFI--STYPLDTFEYGCSIL 458
              ++                           + L    +++ I  +   LD +E+   + 
Sbjct: 1014 NKYYKFNGEDKELSVEDRGDRFPYPLQEKFSLMLFSPVSWDVIPNTKIDLDEWEHVNCLK 1073

Query: 459  SCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLI 502
            + S + +        Y  VGT Y   E+   ++GRIL+F I+E            + + I
Sbjct: 1074 NVSLAYEGTRSGLKGYIAVGTNYNYGEDVT-SRGRILIFDIIEVVPEPGQPLTKNRFKEI 1132

Query: 503  AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTR 562
              K+ KG V +L+   G L++A+ QKI  Y W L+D+   +L         I    + T 
Sbjct: 1133 YAKDQKGPVTALSQVKGFLVSAVGQKI--YIWQLKDN---DLVGVAFIDTQIYTHQILTI 1187

Query: 563  GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNF 617
               ++V D+ KSISLL ++ E   +   +RD+    + +VE + D+  +G     +E N 
Sbjct: 1188 KSLLLVADVYKSISLLRFQEEYRTLSLVSRDFRPCEVFSVEYMIDNTTMGFLVSDSEKNL 1247

Query: 618  NLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRH--------GSLVMRLPDSDVGQI 669
             L+  +  S  +   +R  L    ++HLG+ VN F          G     L  +D   I
Sbjct: 1248 VLYMYQPESRESLGGQR--LLRKADFHLGQAVNSFFRIKCKLGELGEDKKNLTGADKRHI 1305

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TV 727
               ++ T++G +G I  +P + Y  L  LQ  L      + GLN + +R++ + KK  T 
Sbjct: 1306 --TMYATLDGGLGYIMPVPEKTYRRLLMLQNVLVSQGAHIAGLNPKAFRTYKSWKKLQTN 1363

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             A++ +DG+L+ ++L LS     E+SK +   +EEL   + ++ ++
Sbjct: 1364 PARSVIDGELVYNYLQLSIPEKLEVSKKIGTKLEELLDDLSDIQKI 1409



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 10/145 (6%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 111
           ++VT +G  K+G+L +++  +      +  L G   MW++ +  D     FL++S    T
Sbjct: 512 ELVTTAGYGKNGALCVLQKSVRPQIVTTFTLPGCSNMWTVHAGEDK--HAFLILSQEDGT 569

Query: 112 RILAMNLEDELEETEIEGFCSQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTS--RELRNE 168
            IL     DE+ E +  GF +   T++  +      +VQVTS +VRL+   +  + +  E
Sbjct: 570 MILQTG--DEINEIDNTGFATHIPTVYAGNLGNLKYIVQVTSSAVRLLQGINQLQHIPLE 627

Query: 169 WKSPPGYSVNVATANASQVLLATGG 193
             SP    V+V + +    LL T G
Sbjct: 628 LGSP---IVHVTSVDPYISLLTTDG 649


>gi|256075924|ref|XP_002574265.1| Splicing factor 3B subunit 3 5' fragment [Schistosoma mansoni]
          Length = 982

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 33/343 (9%)

Query: 99  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 158
           +D +++VSF++ T +L++   + +EE    GF   T TL C     + LVQV    +R +
Sbjct: 433 YDAYIIVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLTCSQLGDDALVQVYPDGIRHI 490

Query: 159 SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHAQLEY 216
            S  R   N W++P   ++     N  QV++A  GG LVY E+   G L E  +  ++  
Sbjct: 491 RSDKRV--NVWRAPGKKTITKCAVNRRQVVIALTGGELVYFEMDMTGQLNEYTERKEMPA 548

Query: 217 EISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV-LLCA 275
           ++ C+ +  I  N   S+  AVG+  D +VRI SL   + +T   + G  IP +   LC 
Sbjct: 549 DVICMALGRIPANEQRSRFLAVGL-ADNTVRILSLDPSDCLTPLTMQG--IPSTPESLCI 605

Query: 276 FE---------------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQ 314
            E                     GI Y+   L +G LL  +L+  TGEL+D +   LGT+
Sbjct: 606 VEMGTNEPSPSTDDGESEATSSGGILYMNIGLINGVLLRVILDPVTGELSDTRTRYLGTR 665

Query: 315 PITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA 374
           P+ L     +    V + S R  + Y+   +     ++ + + +   F+S   P+ +   
Sbjct: 666 PVKLFRIMMQGGEAVLSVSSRSWLSYAYQNRFHLIPLSYEALEYASGFSSEQCPEGIVAI 725

Query: 375 KEGELTIGTIDDIQKLHIR-SIPLGEHPRR-ICHQEQSRTFAI 415
               L I  ++ +  +  + S PL   PR+ + H + + T+ I
Sbjct: 726 CNNSLRIMALEKLGAVFNQISYPLQYTPRKFVFHPDSNITYII 768


>gi|357611296|gb|EHJ67409.1| putative cleavage and polyadenylation specific factor 1 [Danaus
           plexippus]
          Length = 328

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 41/337 (12%)

Query: 460 CSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKE 506
           C F   S +  Y  +GT Y   E+   ++GRIL++ + D            + + I  KE
Sbjct: 4   CGFIQLSGLRGYIAIGTNYNYGEDI-TSRGRILIYDIIDVVPEPGQPLTKNRFKEIYAKE 62

Query: 507 TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRG 563
            KG V +L    G L++A+ QKI  Y W L+D+   G   + ++   H  +LA+      
Sbjct: 63  QKGPVTALTQVLGFLISAVGQKI--YLWQLKDNDLVGVAFIDTQIYVH-RMLAV-----K 114

Query: 564 DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 618
           + I+V D+ KSISLL Y+H+   +   +RD     +  ++ + D+  LG     +E NF 
Sbjct: 115 NLILVADVYKSISLLRYQHQHRTLSLVSRDLRTAQIYDMQFMIDNTSLGFLVSESEGNFA 174

Query: 619 LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
           ++  +  +  +   +R  L    +YHLG+ V+       + RL      Q    +F T++
Sbjct: 175 MYMHQPQARESYGGQR--LIRKCDYHLGQRVH------AMFRLAARGERQTHVTMFTTLD 226

Query: 679 GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDG 735
           G +G +  +  + Y  L  LQ  +      + GLN + +R++   ++ +    A+  LDG
Sbjct: 227 GGVGYVLPVSEKVYRRLLMLQNVINNYCCHLAGLNPKAYRTYKVSRRALCGGAARGVLDG 286

Query: 736 DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
           DL+  +  + RT   +I++ +   VEE+   + E+ R
Sbjct: 287 DLVSLYTSMPRTEQQDIARKIGTKVEEIMSDLYEIDR 323


>gi|270003792|gb|EFA00240.1| hypothetical protein TcasGA2_TC003068 [Tribolium castaneum]
          Length = 1392

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 36/331 (10%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAF 517
            Y  VGT Y   E+   ++GRIL+F I+E            + + I  K+ KG V +L+  
Sbjct: 1068 YIAVGTNYNYGEDVT-SRGRILIFDIIEVVPEPGQPLTKNRFKEIYAKDQKGPVTALSQV 1126

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
             G L++A+ QKI  Y W L+D+   +L         I    + T    ++V D+ KSISL
Sbjct: 1127 KGFLVSAVGQKI--YIWQLKDN---DLVGVAFIDTQIYTHQILTIKSLLLVADVYKSISL 1181

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 632
            L ++ E   +   +RD+    + +VE + D+  +G     +E N  L+  +  S  +   
Sbjct: 1182 LRFQEEYRTLSLVSRDFRPCEVFSVEYMIDNTTMGFLVSDSEKNLVLYMYQPESRESLGG 1241

Query: 633  ERGRLEVVGEYHLGEFVNRFRH--------GSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
            +R  L    ++HLG+ VN F          G     L  +D   I   ++ T++G +G I
Sbjct: 1242 QR--LLRKADFHLGQAVNSFFRIKCKLGELGEDKKNLTGADKRHI--TMYATLDGGLGYI 1297

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFL 742
              +P + Y  L  LQ  L      + GLN + +R++ + KK  T  A++ +DG+L+ ++L
Sbjct: 1298 MPVPEKTYRRLLMLQNVLVSQGAHIAGLNPKAFRTYKSWKKLQTNPARSVIDGELVYNYL 1357

Query: 743  DLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             LS     E+SK +   +EEL   + ++ ++
Sbjct: 1358 QLSIPEKLEVSKKIGTKLEELLDDLSDIQKI 1388


>gi|440301427|gb|ELP93813.1| DNA repair protein xp-E, putative [Entamoeba invadens IP1]
          Length = 1001

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 41/331 (12%)

Query: 438 QTFEFI--STYPLDTFEYGCSILSCSFSDD-SNVYYCVGTAYVLPEENEPTKGRILVFIV 494
           Q F  I  ++YP +     C    C   +  S   Y +GTA +   E EPT GR+LV   
Sbjct: 684 QLFNLIDGASYPSEFLLLSCDEEICMCVETISEHLYVIGTAIIKENEVEPTVGRLLVAEE 743

Query: 495 EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 554
            DGKL L    E +GAVY++  F   +LA IN+ + +          R +        ++
Sbjct: 744 VDGKLVLKCTHEFEGAVYAIKKFKQHVLALINRHLHVMDITNESVLPRNIIEL-----NM 798

Query: 555 LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA-RDYNANWMSAVEILDDDIYLGA 613
           + + ++  GD+I+VGD MKS+++ + K ++ +  E+A  D   +W++AV  +++    G 
Sbjct: 799 IGVCMEVLGDYIIVGDFMKSVTVFVCKSDDLSQTEKAWTDIAVSWVNAVGCIEN----GD 854

Query: 614 ENNFNLFTVRKNSEGATD--EERGRLE----VVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            N F    V  N +      EER  +E     VG+ H+ E +N F   SL          
Sbjct: 855 SNKFVSCDVDGNVKIFVKGGEERWYIEDLLKCVGKIHVCECIN-FVEKSLY--------- 904

Query: 668 QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
               V  G V+G +  I+ L    Y  L+K Q  L K          + WR F   K   
Sbjct: 905 --KGVTLGGVSGALYNISCLSDNDYQILKKAQDMLVK----------DNWRQFVGTKTKE 952

Query: 728 DAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
              NF+DGD IE+ LD    R     K + V
Sbjct: 953 VMTNFIDGDKIETILDWPLERQTSFCKKIGV 983


>gi|407034933|gb|EKE37449.1| DNA damage-binding protein, putative [Entamoeba nuttalli P19]
          Length = 995

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 171/770 (22%), Positives = 326/770 (42%), Gaps = 124/770 (16%)

Query: 26  EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 85
           ++LE++ N G ++D     +  +    VV   G      L I   G GI E  S E+  I
Sbjct: 325 KILEKWSNFGSLMD--ARQISNREDYLVVGNGGGKGSIGLMI--KGSGIEELGSCEINDI 380

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE---LEETEIEGFCSQTQTLFCHDA 142
           K + S+          +++V F  E+ I  ++ + +   +EE+ ++    + + + C   
Sbjct: 381 KSVESIEYDRK----KYVIVGFEEESNIWEIHQKSKHIKIEESSLKKVIGKERVMCC-GI 435

Query: 143 IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
           I  +L+ V    +  +    +  +N       +  +    N  Q +    G  L   +I 
Sbjct: 436 IKERLIFVCKKGIYSIDKHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FKIT 489

Query: 203 DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
           + +  + K    E  +SC DIN         +I  +G+W D S+ IF   D+N I K+  
Sbjct: 490 EELKIQ-KMKDFEQNVSCFDIN---------EIIVIGLW-DGSILIF---DINGILKKTE 535

Query: 263 GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPITLR 319
             + I RS+L+       Y+ C   D  ++ FL N    + T + K+      +Q I L+
Sbjct: 536 VVDTIGRSILI--DHNKIYVGC---DNEIIVFLYNQMEEDCTYKNKLKYHIETSQSIKLK 590

Query: 320 TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLAIA 374
              S            P VI  +NK   +    L     +++  +C   S      +  A
Sbjct: 591 KIYS-----------IPCVI--ANKTFTFQQTGLVPLAVEDLIDICE--SPVGDYGVICA 635

Query: 375 KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRL 434
            +  +  G + ++ ++  + I  GE+  +I            ++K+           + L
Sbjct: 636 TKRGIVFGLMKEMSRVTFKMIHSGENCCKIATDGSYGLLVGKTIKS-----------INL 684

Query: 435 LDDQTFEFISTYPLDTFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 493
           +D        ++ + T E   + L+ C  S + N+Y  VGTA +   E EP+ GRIL+  
Sbjct: 685 ID-------GSFGVTTIELKSNELALCVDSLEDNIY-AVGTAIIRENEIEPSSGRILLIR 736

Query: 494 VE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 552
            + +G + ++  ++  GAVY L      ++A IN+ + + +   +D  T++         
Sbjct: 737 QDTEGLIYIVGTEDYDGAVYCLKKCQKGIVAFINRNVHVIEKKGKDLNTKQ-----NMLL 791

Query: 553 HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI--- 609
            ++ + +    D+I+ GDL +S+S+  Y+++   ++   +D    W S V  ++ +    
Sbjct: 792 PLIGVSLDICKDYIIAGDLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTS 851

Query: 610 YLGAE--NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLPD 663
           +L A+   N  +F      E  TD+E+  + ++ + H+ + +N     F  G L+     
Sbjct: 852 FLVADVSGNIKIFN-SDEEEPKTDDEK--ISLISQVHVADSINFIQKSFYKGCLM----- 903

Query: 664 SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
                      G V+G I  I  +  E YLFL K+Q+ L K            WR   N 
Sbjct: 904 -----------GGVHGGIYNICEISKEHYLFLNKIQSKLVK----------SNWRESVNT 942

Query: 724 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
           ++T    N +DGD IES L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 943 QQTSPMMNCIDGDKIESILEWSEKKQMLLAQKIGVEHQEMIEKIQSLFSL 992


>gi|255918233|ref|NP_001157645.1| cleavage and polyadenylation specificity factor subunit 1 isoform 1
            [Mus musculus]
          Length = 1450

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + +    R+   +R+
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDITGSRLTSNSRM 1437



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 627


>gi|431908146|gb|ELK11749.1| Cleavage and polyadenylation specificity factor subunit 1 [Pteropus
           alecto]
          Length = 820

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 194/466 (41%), Gaps = 74/466 (15%)

Query: 356 VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
           +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 349 IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 408

Query: 411 RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
           + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 409 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 468

Query: 446 YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
             L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 469 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 527

Query: 496 DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
            G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 528 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 582

Query: 550 HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
               +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 583 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 642

Query: 610 YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
            LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 643 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 696

Query: 667 GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
            + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 697 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 756

Query: 716 QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            +R  + +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 757 AFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 802


>gi|417406474|gb|JAA49895.1| Putative mrna cleavage and polyadenylation factor ii complex subunit
            cft1 cpsf subunit [Desmodus rotundus]
          Length = 1444

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1092

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ +   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEDSKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1381 AFRMLHVDRRTLQNAVRNILDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1440


>gi|348512553|ref|XP_003443807.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Oreochromis niloticus]
          Length = 1456

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 208/483 (43%), Gaps = 80/483 (16%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 985  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1044

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFISTYP 447
            + +A+C+   + C        EE E   +                +L+   ++E I    
Sbjct: 1045 KVYAVCTSVKEPCTRIPRMTGEEKEYEVIERDERYIHPQQEKFSIQLISPVSWEAIPNTR 1104

Query: 448  LD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
            +D   +E+   + + +      V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1105 IDLEEWEHVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILDVIEVVPE 1163

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D+         G
Sbjct: 1164 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDNDL------TG 1215

Query: 550  HHGHILALYVQ---TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
                   LY+    +  +FI+  DLMKSISLL Y+ E   +   +RD     + ++E + 
Sbjct: 1216 MAFIDTQLYIHQMFSIKNFILAADLMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFMV 1275

Query: 607  DDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP- 662
            D+  LG   ++ + NL+      E        RL    +++ G  +N F       R+P 
Sbjct: 1276 DNNQLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------WRMPC 1329

Query: 663  ----DSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
                D+   +  T        F T++G IG++  +  + Y  L  LQ  L  ++    GL
Sbjct: 1330 RGALDASSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGL 1389

Query: 713  NHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N + +R  +++++++    KN LDG+L+  +L LS     E++K +  + + +   + E+
Sbjct: 1390 NPKAFRMLHSDRRSLQNPVKNILDGELLNKYLYLSMMERSELAKKIGTTQDIILDDLLEI 1449

Query: 771  TRL 773
             R+
Sbjct: 1450 DRV 1452


>gi|156364999|ref|XP_001626630.1| predicted protein [Nematostella vectensis]
 gi|156213514|gb|EDO34530.1| predicted protein [Nematostella vectensis]
          Length = 1420

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 227/531 (42%), Gaps = 81/531 (15%)

Query: 308  KVSLGTQPITLRTFSSKNT-THVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNS 364
            K  L  +   LR F+  ++ + +F     P  I+ +N+   + +    +  V+    F++
Sbjct: 900  KSGLDPKVAMLRVFNDISSYSGIFVCGSYPFWIFVTNRGAFHWHPMSIDGPVTCFAAFHN 959

Query: 365  AAFPDS-LAIAKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK 419
               P   L     GEL I  +           +R +PL   P  + +  +S+T+AI + +
Sbjct: 960  VNCPKGFLYFNTRGELRISVLPTHLSYDSPWPVRKVPLRYTPHMVSYNRESKTYAIVTSE 1019

Query: 420  NQSC-------AEESEMHFVRLLDDQTFEFIST--------------------YPLDTFE 452
             + C       AE+ E  FV  + D  F + ST                    + LD +E
Sbjct: 1020 QEPCKKIPRVTAEDKE--FVDTIRDARFIYPSTERFVLQLISPISWEVIPNTRHDLDEWE 1077

Query: 453  YGCSILSCSF-SDDSNV----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG----- 497
            +  ++ +    S++++     + CVGT  +  EE    +GRIL+F     + E G     
Sbjct: 1078 HVTTMKNLLLHSEETHTGRKGFICVGTTQLYGEEIA-VRGRILIFDIIEVVPEPGQPLTK 1136

Query: 498  -KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGH 553
             K +L+ EKE KG V +LN  NG L++ I QKI  Y W   D+   G   + ++   H  
Sbjct: 1137 NKFKLLYEKEQKGPVTALNQVNGYLVSGIGQKI--YIWNFTDNDLVGMAFIDTQLYIHSL 1194

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG- 612
            +      T  +F++  D+ KSI+LL  + E   +   ++D     + A +   D   +G 
Sbjct: 1195 V------TIRNFVIAADVCKSITLLRLQEETKTLAFVSKDPKNLEVYAADFFIDGPQIGF 1248

Query: 613  ----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS---- 664
                 E N  LFT +   E    +   RL    + ++G  +  F   +    L  S    
Sbjct: 1249 LVSDVEKNLVLFTYQ--PEAIESQGGQRLLQRADINVGTHITSFFRIAAKAHLKASGEKS 1306

Query: 665  -DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
             ++ Q+    FGT++G +G++  +  + +  L  LQT L   I  V GLN + +R     
Sbjct: 1307 KEMRQL--TCFGTLDGALGLMLPMTEKTFRRLHMLQTKLVDCIPHVAGLNPKAFRMLQWR 1364

Query: 724  KKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            K+ +    +N LD  L+  ++ LS     E+++ +  +  ++   + ++ R
Sbjct: 1365 KRKLCNPHRNVLDWQLLFKYMHLSFMERQEVARKIGTTPAQIMDDMMDIER 1415



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 24/134 (17%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST---------------- 95
           +VV+CSG  K+G+L +++  I      + EL G   MW++ S                  
Sbjct: 495 EVVSCSGYGKNGALTVLQRSIRPQVVTTFELPGCTDMWTVFSKDQKKGAQTNAIHRYPSQ 554

Query: 96  -----DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD-AIYNQLVQ 149
                ++ + +FL++S   E   + +  E E+ E +  GF +Q  T++  +    + ++Q
Sbjct: 555 PCTQGNEKYHSFLILS--REDSSMILKTEQEIMEVDQSGFSTQCATIYAGNFGNGSYILQ 612

Query: 150 VTSGSVRLVSSTSR 163
           VT   VRL+   ++
Sbjct: 613 VTPLGVRLLEGVNQ 626


>gi|395512730|ref|XP_003760588.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Sarcophilus harrisii]
          Length = 1449

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 978  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1037

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 445
            + +A+ +  N  C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVATSTNALCTRIPRMTGEEKEFETIERDDRYIHPLQEAFSIQLISPVSWEAIPNAR 1097

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1098 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1156

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1211

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D  
Sbjct: 1212 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDSA 1271

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1272 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1325

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + PT             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1326 AEGPTKKSIVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1385

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1386 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLEIDRV 1445


>gi|402879380|ref|XP_003903320.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Papio anubis]
          Length = 1389

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 918  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 977

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 978  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1037

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1038 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1096

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1097 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1151

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1152 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1211

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1212 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1271

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1272 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1331

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1332 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1385



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 411 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 470

Query: 77  QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 112
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 471 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTM 530

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 531 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 580


>gi|410987992|ref|XP_004000273.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Felis catus]
          Length = 1432

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 961  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1020

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1021 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1080

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1081 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1139

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1140 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1194

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1195 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1254

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1255 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1308

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1309 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1368

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + + + + E  R+
Sbjct: 1369 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILEDLLETDRV 1428



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 454 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 513

Query: 77  QASVELQGIKGMW------------------------SLRSSTDDPFDTFLVVSFISETR 112
             + EL G   MW                        +L +  D     FL++S    T 
Sbjct: 514 VTTFELPGCYDMWTVIAPVRKEQEETSKGEGAEQEPSTLEAEDDGRRHGFLILSREDSTM 573

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 574 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 623


>gi|354491126|ref|XP_003507707.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 3 [Cricetulus griseus]
          Length = 1449

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 627


>gi|354491122|ref|XP_003507705.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 1 [Cricetulus griseus]
          Length = 1441

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|383863556|ref|XP_003707246.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Megachile rotundata]
          Length = 1415

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 232/529 (43%), Gaps = 84/529 (15%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  ++   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPITSFAPFNNINCPQ 956

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 424
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +    S A
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVIT----SIA 1012

Query: 425  EESEMHFVRLLDDQTF-------EFI-----------------STYP-----LDTFEYGC 455
            E  + ++    +D+ F        FI                  T P     LD +E+  
Sbjct: 1013 EPLKSYYRFNGEDKEFTEEDRPDRFIFPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVT 1072

Query: 456  SILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KL 499
             + + S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + 
Sbjct: 1073 CLKNVSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRF 1131

Query: 500  QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILA 556
            + I  KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L+
Sbjct: 1132 KQIYAKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLS 1188

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---- 612
            +        I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG    
Sbjct: 1189 I-----KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNNNLGFLVA 1243

Query: 613  -AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP- 670
              E+N  LF  +  S  +   +  +L    ++HLG+ VN F      +  P +D      
Sbjct: 1244 DGESNIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFRIRCRISDPANDKKHFSG 1301

Query: 671  -----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
                   ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +
Sbjct: 1302 ADKRHVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSYIR 1361

Query: 726  TV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            T    A+  +DGDL+  +L L      +++K +   V+E+ + + E+ R
Sbjct: 1362 TQGNPARGIIDGDLVWRYLYLPNNEKIDVAKKIGTRVQEIIEDLTEIDR 1410



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGALNNDEQVRPEAEGSHAF 564

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVSLLSEDGQVMLLTLREGRGTAKLHAQ 672


>gi|355680843|gb|AER96659.1| cleavage and polyadenylation specific factor 1, 160kDa [Mustela
            putorius furo]
          Length = 1399

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 929  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 988

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 989  KVYAVATSTNMPCTRIPRMTGEEKEFEAIERDDRYVHPQQEAFSIQLISPVSWEAIPNAR 1048

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1049 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1107

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1108 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1162

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1163 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1222

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1223 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1276

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1277 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1336

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1337 AFRLLHADRRALQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1396



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 40/174 (22%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 422 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 481

Query: 77  QASVELQGIKGMW------------------------SLRSSTDDPFDTFLVVSFISETR 112
             + EL G   MW                        +L +  D     FL++S    T 
Sbjct: 482 VTTFELPGCYDMWTVIAPARKEQEETPKGDGAEQEPSALEADDDGRRHGFLILSREDSTM 541

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFC---HDAIYNQLVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F     D  Y  +VQV+   +RL+   S+
Sbjct: 542 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDGRY--IVQVSPLGIRLLEGVSQ 591


>gi|119602512|gb|EAW82106.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
 gi|119602513|gb|EAW82107.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
 gi|119602514|gb|EAW82108.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_a
            [Homo sapiens]
          Length = 1365

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 894  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 953

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 954  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1013

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1014 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1072

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1073 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1127

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1128 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1187

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1188 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1247

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1248 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1307

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1308 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1361



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 37/173 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 386 EVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 445

Query: 77  QASVELQGIKGMWSL-----RSSTDDP--------------------FDTFLVVSFISET 111
             + EL G   MW++     +   D+P                       FL++S    T
Sbjct: 446 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDST 505

Query: 112 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
            IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 506 MILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 556


>gi|197245729|gb|AAI68713.1| Cpsf1 protein [Rattus norvegicus]
          Length = 1439

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 968  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1027

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1028 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1087

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1088 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1146

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1147 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1201

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1202 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1261

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1262 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1315

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1316 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1375

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1376 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1421



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 461 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 520

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 521 VTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTM 580

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 581 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 630


>gi|426361048|ref|XP_004047737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Gorilla gorilla gorilla]
          Length = 1440

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1089 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1147

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1322

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1323 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1382

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1383 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1436



 Score = 39.3 bits (90), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 27/137 (19%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL-----RSSTDDP-------- 98
           ++V CSG  K+G+L +++  I      + EL G   MW++     +   D+P        
Sbjct: 497 EIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQE 556

Query: 99  -----------FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ- 146
                         FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ 
Sbjct: 557 PSTPEADDDGRRHGFLILSREDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRY 614

Query: 147 LVQVTSGSVRLVSSTSR 163
           +VQV+   +RL+   ++
Sbjct: 615 IVQVSPLGIRLLEGVNQ 631


>gi|355698297|gb|EHH28845.1| Cleavage and polyadenylation specificity factor 160 kDa subunit
            [Macaca mulatta]
          Length = 1436

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 195/460 (42%), Gaps = 62/460 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 965  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1024

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1025 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1084

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1085 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1143

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1144 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1198

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1199 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1258

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1259 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1318

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1319 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1378

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +++T+    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1379 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1418


>gi|397497327|ref|XP_003819464.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Pan paniscus]
 gi|410336497|gb|JAA37195.1| cleavage and polyadenylation specific factor 1, 160kDa [Pan
            troglodytes]
          Length = 1442

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1324

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1325 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1384

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1385 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1438



 Score = 40.0 bits (92), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 464 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 523

Query: 77  QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 112
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 524 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTM 583

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 584 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 633


>gi|392306997|ref|NP_001254722.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
 gi|380812168|gb|AFE77959.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
 gi|383417835|gb|AFH32131.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
          Length = 1442

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1324

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1325 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1384

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1385 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1438



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 464 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 523

Query: 77  QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 112
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 524 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTM 583

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 584 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 628


>gi|16751835|ref|NP_444423.1| cleavage and polyadenylation specificity factor subunit 1 isoform 2
            [Mus musculus]
 gi|17374611|sp|Q9EPU4.1|CPSF1_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|11762096|gb|AAG40326.1|AF322193_1 cleavage and polyadenylation specificity factor 1 [Mus musculus]
 gi|38614159|gb|AAH56388.1| Cleavage and polyadenylation specific factor 1 [Mus musculus]
          Length = 1441

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1423



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|344236599|gb|EGV92702.1| Cleavage and polyadenylation specificity factor subunit 1 [Cricetulus
            griseus]
          Length = 1419

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 948  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1007

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1008 KVYAVATSTNTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1067

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1068 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1126

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1127 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1181

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1182 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1241

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1242 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1295

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1296 AEGPSKKSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1355

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1356 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1401



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 468 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 527

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 528 VTTFELPGCYDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTM 587

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 588 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 637


>gi|345779232|ref|XP_532356.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Canis lupus familiaris]
          Length = 1460

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 989  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1048

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1049 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1108

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1109 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1167

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1168 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1222

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1223 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1282

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1283 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1336

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1337 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1396

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1397 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1456



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 482 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 541

Query: 77  QASVELQGIKGMW------------------------SLRSSTDDPFDTFLVVSFISETR 112
             + EL G   MW                        +L +  D     FL++S    T 
Sbjct: 542 VTTFELPGCYDMWTVIAPVRKEQEETSKGEVAEQESSALEAEDDGRRHGFLILSREDSTM 601

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 602 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 651


>gi|56676371|ref|NP_037423.2| cleavage and polyadenylation specificity factor subunit 1 [Homo
            sapiens]
 gi|23503048|sp|Q10570.2|CPSF1_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|16878041|gb|AAH17232.1| Cleavage and polyadenylation specific factor 1, 160kDa [Homo sapiens]
 gi|119602516|gb|EAW82110.1| cleavage and polyadenylation specific factor 1, 160kDa, isoform CRA_c
            [Homo sapiens]
 gi|123993607|gb|ABM84405.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
 gi|123999626|gb|ABM87355.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
 gi|307684758|dbj|BAJ20419.1| cleavage and polyadenylation specific factor 1, 160kDa [synthetic
            construct]
          Length = 1443

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 972  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1031

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1032 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1091

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1092 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1150

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1151 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1205

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1206 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1265

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1266 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1325

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1326 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1385

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1386 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1439



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 37/173 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 464 EVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 523

Query: 77  QASVELQGIKGMWSL-----RSSTDDP--------------------FDTFLVVSFISET 111
             + EL G   MW++     +   D+P                       FL++S    T
Sbjct: 524 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDST 583

Query: 112 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
            IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 584 MILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 634


>gi|338728511|ref|XP_001505047.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform 1 [Equus caballus]
          Length = 1444

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1092

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1381 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1440


>gi|338728513|ref|XP_003365689.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Equus caballus]
          Length = 1450

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 979  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1038

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1039 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1098

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1099 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1157

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1158 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1212

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1213 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1272

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1273 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1326

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1327 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1386

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1387 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1446


>gi|410042329|ref|XP_003954555.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Pan troglodytes]
          Length = 1296

 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 825  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 884

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 885  KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 944

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 945  IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1003

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1004 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1058

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1059 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1118

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1119 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1178

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1179 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1238

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1239 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1292


>gi|241952575|ref|XP_002419009.1| pre-mRNA-splicing factor, putative; pre-spliceosome component,
            putative [Candida dubliniensis CD36]
 gi|223642349|emb|CAX42591.1| pre-mRNA-splicing factor, putative [Candida dubliniensis CD36]
          Length = 1187

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 158/754 (20%), Positives = 308/754 (40%), Gaps = 97/754 (12%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +++ + S +   D +LV+S    ++ L +++ + +E+ E   F     T+         +
Sbjct: 454  IFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQSTISVQQVGIASV 513

Query: 148  VQVTSGSVRLVSSTS-RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG---D 203
            VQV S  ++ + + + ++   +W  P G ++  A+ N  QVL+A    ++VY EI    D
Sbjct: 514  VQVYSNGIKHIRTVNGKKKTTDWFPPAGITITHASTNNQQVLIALSNLNVVYFEIDSTDD 573

Query: 204  GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL- 262
             ++    H ++   I+ + I     N   S  A +G  +D ++++ SL + N +  + L 
Sbjct: 574  QLIEYQDHLEISTTITAMAIQE--HNSEKSSFAIIGC-SDETIQVVSLQEDNCLEIKSLQ 630

Query: 263  ---GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
                     + +     E  +++   + +G      ++   G L++ +   LG++P+ L 
Sbjct: 631  ALSANSSSLKMLKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYLGSKPVNLS 688

Query: 320  TFSSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP-DSLAIAKEG 377
                 N    V A S  P + Y        + +   ++++   F S     + +   K+ 
Sbjct: 689  VIKFSNEIEGVLAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDN 748

Query: 378  ELTIGTI-------DDIQKLHIRSIPLGEHPRR-ICHQEQSRTFAI-----------CSL 418
             L I ++       D  Q L I +  L   PR+ I H +  R F             C++
Sbjct: 749  NLVIFSVGKEDSVFDPSQDLTITNTKLRYTPRKMITHGD--RLFISESEYNVQGPFKCNI 806

Query: 419  KNQSCAEESEMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFS 463
                     E ++               ++++DD+T + I +   +  E   S+   +F+
Sbjct: 807  NGNVKENVDEDYYEAFGYDRKQDSWASCIQVVDDKTNQVIQSLQFEENESIVSMSDVAFN 866

Query: 464  DD-SNVY---YCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
               S+V+     VG      +LP   E  K  +  F +    LQL+ + E       L  
Sbjct: 867  KSLSSVHASHLVVGVCTNQTILPNSYE--KSYLYTFKIGKKHLQLVHKTELDYIPQVLEN 924

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVGDLMK 573
            F  KLL A N  IQLY     D G ++L  +          +   +      I+      
Sbjct: 925  FQDKLLVASNNHIQLY-----DIGQKQLLKKSTTIIDFSQNINKIIPQSNRIIICDSHKS 979

Query: 574  SISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---------- 623
            SI    +   +      A D     ++++  LD D  +G +   N+F  R          
Sbjct: 980  SIIFAKFDDSQNQFVPFADDIMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQAD 1039

Query: 624  ------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTV 677
                  K+ EG  +    +L+ + E+H+G+ +     G L       ++    +VI+  +
Sbjct: 1040 DDWTILKSQEGILNSCPYKLQNLIEFHIGDIITSLNLGCL-------NLAGTESVIYTGL 1092

Query: 678  NGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGD 736
             G IG++  L  +  +  L  LQ  +++    + G +H ++RS+ N       KN +DGD
Sbjct: 1093 QGTIGLLVPLVSKSEVELLFNLQLLMQQFQNNLVGKDHLKFRSYYNP-----IKNVIDGD 1147

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            L+E FL+   +   EIS+ +N SV ++ K++ +L
Sbjct: 1148 LLERFLEFDTSLRIEISRKLNKSVNDIEKKLIDL 1181


>gi|334326317|ref|XP_001364707.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Monodelphis domestica]
          Length = 1449

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 200/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 978  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1037

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 445
            + +A+ +  N  C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVATSTNALCTRIPRMTGEEKEFETIERDERYIHPLQEAFSIQLISPVSWEAIPNAR 1097

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1098 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1156

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1211

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D  
Sbjct: 1212 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDSA 1271

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1272 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1325

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1326 AEGPSKKSIVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1385

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1386 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLEIDRV 1445


>gi|241060959|ref|XP_002408050.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
 gi|215492346|gb|EEC01987.1| cleavage and polyadenylation specificity factor, putative [Ixodes
            scapularis]
          Length = 1241

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 35/323 (10%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF 517
            Y  +GT Y    E+  ++GRI +  + D            K++++  KE KG V +L+  
Sbjct: 916  YLALGTNYCY-GEDVTSRGRITILDIIDVVPEPGQPLTKNKIKIVYSKEQKGPVTALSQV 974

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
             G LL+AI QK  +Y W L+D+G   L         I    V T  + I+VGD+ KS+SL
Sbjct: 975  VGFLLSAIGQK--MYIWQLKDNG---LVGVAFIDTQIYIHSVVTVKNLILVGDVFKSVSL 1029

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 632
            L Y+     +   +RD     + AVE   D+  +      +E N  L+  +  S  +   
Sbjct: 1030 LRYQEASRTLSLVSRDVRPLEVFAVEFFIDNSQMSFLVTDSERNMILYMYQPESRESCGG 1089

Query: 633  ERGRLEVVGEYHLGE-----FVNRFRHGSLV---MRLPDSDVGQIPTVIFGTVNGVIGVI 684
            +  RL   G++H+G      F  + R G +     RL  S  G+  T++  T++G +G +
Sbjct: 1090 Q--RLLRRGDFHIGSPVVSMFRIKCRMGEVAKHDRRLAASVDGRHITML-ATLDGSLGYV 1146

Query: 685  ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFL 742
              +P + Y  L  LQ  L   +    GLN + +R ++++++ +    KN LDG+LI  F+
Sbjct: 1147 LPVPEKTYRRLLMLQNVLVTNMPHYAGLNPKAFRMYHSQRRVLGNPHKNILDGELIWKFM 1206

Query: 743  DLSRTRMDEISKTMNVSVEELCK 765
             LS     E+SK +  +V ++ +
Sbjct: 1207 HLSFMERSELSKKIGTTVTQVVQ 1229


>gi|1045574|gb|AAC50293.1| cleavage and polyadenylation specificity factor [Homo sapiens]
          Length = 1442

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 201/479 (41%), Gaps = 73/479 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 972  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1031

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1032 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1091

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1092 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1150

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1151 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1205

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1206 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1265

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP---- 662
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1266 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRAT 1319

Query: 663  -----DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
                  S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   
Sbjct: 1320 EGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRA 1379

Query: 717  WRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            +R  + +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1380 FRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1438



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 37/173 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 464 EVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 523

Query: 77  QASVELQGIKGMWSL-----RSSTDDP--------------------FDTFLVVSFISET 111
             + EL G   MW++     +   D+P                       FL++S    T
Sbjct: 524 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDST 583

Query: 112 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
            IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 584 MILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 634


>gi|395860104|ref|XP_003802355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Otolemur garnettii]
          Length = 1441

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 970  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1029

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1030 KVYAVATSTNTPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1089

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1090 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1148

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1149 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1203

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1204 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1263

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1264 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1317

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1318 TEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1377

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1378 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1423



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSLRSST------------------------DDPFDTFLVVSFISETR 112
             + EL G   MW++ +S                         D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIASVRKEEEETPKGEGTEQESGVPEGEEDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|444523674|gb|ELV13604.1| Cleavage and polyadenylation specificity factor subunit 1 [Tupaia
            chinensis]
          Length = 1469

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 203/482 (42%), Gaps = 78/482 (16%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 998  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1057

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1058 KVYAVATSTNAPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1117

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1118 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1176

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1177 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1231

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1232 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1291

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVV--GEYHLGEFVNRFRHGSLVMRLPDS 664
             LG   ++ + NL       E    E  G L ++   ++HLG  VN F       R P  
Sbjct: 1292 QLGFLVSDRDRNLMVYMYLPEA--KESFGGLLLLRRADFHLGAHVNTF------WRTPCR 1343

Query: 665  DVGQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLN 713
               + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN
Sbjct: 1344 GAVEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLN 1403

Query: 714  HEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
               +R  + +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  
Sbjct: 1404 PRAFRMLHVDRRTLQNAVRNVLDGELLSRYLYLSTMERSELAKKIGTTPDIILDDLLETD 1463

Query: 772  RL 773
            R+
Sbjct: 1464 RV 1465


>gi|157110889|ref|XP_001651294.1| cleavage and polyadenylation specificity factor cpsf [Aedes aegypti]
 gi|108883895|gb|EAT48120.1| AAEL000832-PA [Aedes aegypti]
          Length = 1417

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 235/536 (43%), Gaps = 79/536 (14%)

Query: 301  GELTDRKKVSLGTQPITL-RTFSSKNTTH-VFAASDRPTVIYSSNK-----KLLYSNVNL 353
            GE  D     +  + I++ R F++ N  + V    ++P ++  +++       LY+   +
Sbjct: 888  GEKPDEHSTKIMYENISMIRYFNNVNGYNGVAVCGEKPYIMLLTSRGELRAHRLYAKTIM 947

Query: 354  KEVSHMCPFNSAAFPDS-LAIAKEGELTIGTI------DDIQKLHIRSIPLGEHPRRICH 406
            K  +   PFN+   P+  L   ++ EL I         D I    +R IPL   P++I +
Sbjct: 948  KGFA---PFNNVNCPNGFLYFDEQYELKIAVFPGYLSYDSIWP--VRKIPLRSSPKQIVY 1002

Query: 407  QEQSRTFAICSLKNQSC-------AEESEM----------------HFVRLLDDQTFEFI 443
             ++++ + +     + C        E+ E+                  V L+    +E I
Sbjct: 1003 HKENKVYCVVMDAEEVCNKYYRFNGEDKELTEENKGERFLYPMAHKFSVVLVTPSAWEII 1062

Query: 444  --STYPLDTFEYGCSILSCSFSDDS-----NVYYCVGTAYVLPEENEPTKGRILVF---- 492
              ++  LD +E+  ++ + S S +        Y  VGT +    E+  ++GR+L++    
Sbjct: 1063 PETSINLDEWEHVIALKNVSLSYEGARSGFKEYIAVGTNFNY-SEDITSRGRLLLYDIIE 1121

Query: 493  -IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
             + E GK       + +  KE KG V ++   +G L+ A+ QK+  Y W L+DD   +L 
Sbjct: 1122 VVPEPGKPLTRYKFKEVIVKEQKGPVSAITHVSGFLVGAVGQKV--YLWQLKDD---DLV 1176

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
                   +I    + +    I+V D+ KS+SLL ++ +   +   +RDY    +  +E +
Sbjct: 1177 GVAFIDTNIFVHQLVSIKSLILVADVYKSVSLLRFQEDYRTLSLVSRDYQPLNVFQIEYV 1236

Query: 606  DDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR-----HGS 656
             D+  LG   ++   N+ T     E        RL    +YH+G+ +N  FR     H  
Sbjct: 1237 VDNHNLGFLVSDEQCNIITYMYQPESRESFGGQRLLRKCDYHVGQKINSMFRVQCDFHEM 1296

Query: 657  LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQ 716
               R  +S+     T  F T++G IG +  LP + Y  L  LQ  L      + GLN + 
Sbjct: 1297 DYKR--NSNYECKHTTYFATLDGGIGYVLPLPEKTYRRLFMLQNVLMTHSPHLCGLNPKA 1354

Query: 717  WRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            +R+    KK     A+  +DGDLI +FL L      E++K +   ++++C  + E+
Sbjct: 1355 FRTIKTVKKLPINPARCVVDGDLIWTFLTLPANEKLEVAKKIGTRIDDICADLMEI 1410



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 28/162 (17%)

Query: 23  SYV-EVLERYVNLGPIVDFCV---VDLERQGQG------------QVVTCSGAYKDGSLR 66
           SY+ EV +  +N+GPI    V   +  E Q +             ++VT SG  K+G+L 
Sbjct: 451 SYIFEVCDSILNIGPIGHMAVGERISEEEQDENKDVQFVPNKLDLEIVTSSGHGKNGALC 510

Query: 67  IVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETE 126
           +++N I      S  L G   +        D   +F+++S   E   + +   DE+ E E
Sbjct: 511 VLQNSIKPQVITSFGLSGCLDV--------DDMHSFMILS--QEAGTMVLQTGDEINEIE 560

Query: 127 IEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRN 167
             GF +   T+   +   N+ +VQVT+ S+RL+  T R L+N
Sbjct: 561 NTGFATNVPTIHVGNIGGNRFIVQVTTKSIRLLQGT-RLLQN 601


>gi|219110831|ref|XP_002177167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411702|gb|EEC51630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1303

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 37/384 (9%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG----MWSLRSSTDDPFDTFLVVSF 107
           Q+   +G+    +LR+ R+G  + E A  EL G+ G    + +  ++     D F+VVSF
Sbjct: 491 QIYALTGSGPTSALRVTRHGASVTELAVSELPGVPGAIFTIGTGNTAGGKKLDQFIVVSF 550

Query: 108 ISETRILAMNLEDELEETEIE-GFCSQTQTLFCHD-AIYNQLVQVTSGSVRLVSSTSREL 165
              T +L++   + +EE   E GF + + TL C        L QV    VR + +   + 
Sbjct: 551 ADATLVLSVG--ETVEEVGKESGFLTNSPTLACSALGSDGALCQVHPVGVRHIQNGQAK- 607

Query: 166 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG--DGILTEVKHAQLEYEISCLDI 223
             +W  P    +  A+AN SQV++A  GG ++Y E+    G L E    ++  ++ CLD+
Sbjct: 608 --QWHCPGLKRIECASANESQVIVALAGGEIIYFELDPMSGNLMESATREMGADVCCLDV 665

Query: 224 NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEII--PRSVLLCAFE-GI 279
             I +  S S  A VG   D +VR+ SL PD   I  +     +   P SV L     G+
Sbjct: 666 GTIPKGRSRSLFAVVG-CRDQTVRVISLEPDKTKILSQRSSTALKARPHSVALQMMNAGV 724

Query: 280 S---------YLLCALGDGHLLNFLLNMKTGEL-TDRKKVSLGTQPITLRTFSSKNTTHV 329
           +          L+  L DG  L   ++  TG + T   +  LG +P+ +   S ++    
Sbjct: 725 ANSNANVDDLTLIIGLDDGSSLRASIDPITGSIGTSPTRRFLGARPVAVSRISLESNPAT 784

Query: 330 FAASDRPTVIY--SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTID-- 385
              S RP +    +++ K + + ++   + H C F+S A  + +       L I +I+  
Sbjct: 785 LLLSSRPWITRRDAASGKHIMAPLSYAPLDHGCSFSSDAVSEGIVATAGKTLRILSIESS 844

Query: 386 -----DIQKLHIRSIPLGEHPRRI 404
                D +  +   IPL   PR++
Sbjct: 845 GMEGGDDEAFNTNKIPLRYTPRQM 868



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 42/303 (13%)

Query: 489  ILVFIVEDGKLQLIAEKETK-GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--Q 545
            ++  IV   + QL+       G V SL  F G+LL  I   ++LY+      G R+L  +
Sbjct: 1015 VIYRIVNGDRFQLLHRTSVDDGPVLSLAHFQGRLLVGIGTTLRLYEM-----GKRQLLRK 1069

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            SE  +    +   VQT G+   +GD+M+SI ++ Y      +   A D +   +   E+L
Sbjct: 1070 SELRNFPTFVK-TVQTVGERAYIGDMMQSIQIVRYDVSANRLVLIANDASPRPIVCQELL 1128

Query: 606  D-DDIYLGAENNFNLFTVRKNSEGAT-------------DEER----GRLEVVGEYHLGE 647
            D + + +G  + F   +V +   GA              D  R     +LE++ +Y++GE
Sbjct: 1129 DWNTVAVG--DKFGNISVMRLPRGADTSAIDVTGQRALWDSSREDMIPKLELLCQYYVGE 1186

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVI 706
             V      SLV        G   ++I+ TV+G IG      +   + F  +L++ LR   
Sbjct: 1187 VVTSMTRSSLV-------AGGAESLIYVTVSGRIGAFVPFTNRNDVDFYSQLESELRGDA 1239

Query: 707  KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKR 766
                G + + +RS+      V     +DGDL ++F  L   + ++I++ ++ +V E+ K+
Sbjct: 1240 SRPTGRDPQSYRSYYAPMMHV-----VDGDLCDAFNSLGPEKQNKIAEKLDRTVGEIMKK 1294

Query: 767  VEE 769
            +E+
Sbjct: 1295 LED 1297


>gi|345482082|ref|XP_001607052.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Nasonia vitripennis]
          Length = 1415

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 225/519 (43%), Gaps = 74/519 (14%)

Query: 318  LRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSN-VNLK-EVSHMCPFNSAAFPDS-LAI 373
            +R FS+      VF   D P  I+ + +  L ++ +N+   V    PFN+   P   L  
Sbjct: 902  MRYFSNIAGYNGVFIGGDYPHWIFLTGRGELRAHPMNIDGPVKSFAPFNNVNCPQGFLYF 961

Query: 374  AKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LKN---- 420
             ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK+    
Sbjct: 962  NRKDELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVVTSTAEPLKSYYRF 1021

Query: 421  -----QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILSCSFSD 464
                 +   EE    F+    +Q     F  +S  T P     LD +E+   + + S + 
Sbjct: 1022 NGEDKEFTEEERNERFLYPTQEQFSIVLFSPVSWDTIPNTKIDLDQWEHVTCLKNVSLAY 1081

Query: 465  DSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETK 508
            +        Y  +GT Y   E+   ++GRI +F     + E G      + + I  KE K
Sbjct: 1082 EGTRSGLKGYIVIGTNYNYGEDIT-SRGRIFIFDIIEVVPEPGQPLTKNRFKQIYAKEQK 1140

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
            G V ++   +G L++AI QKI  Y W L+D+   +L         I    + +    I+V
Sbjct: 1141 GPVTAITQVSGFLVSAIGQKI--YIWQLKDN---DLVGVAFIDTQIYVCQMLSIKSLILV 1195

Query: 569  GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVR 623
             D+ KS+SLL ++ E   +   +RD+    + A+E    +  LG      E+N ++F+ +
Sbjct: 1196 ADVYKSVSLLRFQPEYKTLSLVSRDFRTTEIYAIEYFIQNNELGFIVADGESNISIFSYQ 1255

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRF--------RHGSLVMRLPDSDVGQIPTVIFG 675
              S  +   ++  L    + HLG+ +N F           +   +   +D   +   ++ 
Sbjct: 1256 PESSQSLGGQK--LIRKADIHLGQKINTFFRIKCKTTDSANPTKQFSGADKRHV--TMYA 1311

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN--EKKTVDAKNFL 733
            T++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +    +   A+  +
Sbjct: 1312 TLDGSLGYILPVPEKTYRRLLMLQNVLVSHIYHIAGLNPKAFRTYKSCVRMQGNPARGII 1371

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            DGDL+  +LDL      EI+K +    +E+   + E+ +
Sbjct: 1372 DGDLVRKYLDLPVNEKIEIAKKIGTGAQEIMDDMHEIYK 1410



 Score = 39.3 bits (90), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 13/172 (7%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST--DDPFDT-------F 102
           ++VT SG  K+G+L +++  I      + +L G + +W++  ST  D+   T       F
Sbjct: 505 ELVTTSGYGKNGALCVLQRSIRPQVITTFDLPGYENIWTVIDSTVSDNRAKTETEGTHGF 564

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L+++    T +L    E   E  +  GF +Q  T+F  +   N+ ++QVT   VRL+   
Sbjct: 565 LILTQDDSTMVLQTGQEIN-EVVDQSGFSTQGTTIFAGNLGSNRYIIQVTQMGVRLLQGL 623

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G +V L + +G  T   HAQ
Sbjct: 624 --EQIQHMPMDLGCPIVHASCADPYVSLLSEDGQVVLLTLREGRGTARLHAQ 673


>gi|260947152|ref|XP_002617873.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
 gi|238847745|gb|EEQ37209.1| hypothetical protein CLUG_01332 [Clavispora lusitaniae ATCC 42720]
          Length = 1242

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 192/866 (22%), Positives = 346/866 (39%), Gaps = 159/866 (18%)

Query: 19   DAKG----SYVEVLERYVNLGPIVDFCVVDLERQ----GQGQVVT-CSGAYKDGSLRIVR 69
            D++G    S VEVL    +L P+VD  +++           Q+VT  S +Y    ++ + 
Sbjct: 416  DSRGLKNLSLVEVLG---SLSPLVDSTMLETYSSEFPDPLKQLVTLASNSY----MKTLT 468

Query: 70   NGIGINEQASVELQ-GIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE 128
             G+ ++E  S  +      +++ + S     D +LV++     + + +++ + +EE    
Sbjct: 469  YGVPVSELVSSPVPINPTSIFTTKISKKSINDDYLVLTSSLTMKSMVLSIGEVVEEVSDS 528

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSS--------TSRELRNEWKSPPGYSVNVA 180
            GF     T+       + LVQV +  +R + +        TS+   N W  P G  +  A
Sbjct: 529  GFALDQHTIAVQQIGQHSLVQVHNNGIRHIRNFFDDSDNVTSKRETN-WYPPAGIVILHA 587

Query: 181  TANASQVLLATGGGHLVYLEI--GDGILTEVKHAQLEY---EISCLDINP--IGENPSYS 233
            + N  QVL+      + Y EI   D  L E +  +LE     I+ L +    + E    S
Sbjct: 588  STNNEQVLVGLSNREVCYFEIDPADDQLIEYQE-RLEVTGGSITALALASKFVTEGDRKS 646

Query: 234  QIAAVGMWTDISVRIFSLPD--LNLITKEHLGGEIIPRSVLLCAFEGISYLL-CALGDGH 290
              A +G   +    I  LP     ++T + L       S+L+   +  +Y +   + +G 
Sbjct: 647  NFAVIGTSEETIQVISLLPKTCFEIVTLQALSANCF--SLLMMPLDKDNYFVHIGMINGV 704

Query: 291  LLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKN--TTHVFAASDRPTVIYSSNKKLLY 348
                 +++ +G+L D +   LGTQP++LR+ +  N  ++ + A S RP + Y +N+    
Sbjct: 705  YARVRIDVVSGKLGDSRLKYLGTQPVSLRSLALPNVASSGILAISSRPWIGYFNNE---- 760

Query: 349  SNVNLKEVSHMCPFNSAAF------PDSLAIAKEGELTIGTI--------DDIQKLHIRS 394
            SN  L  +  +   + +AF       +S+   ++GE+TI T+        D    L I S
Sbjct: 761  SNFKLTPLIDISIKDGSAFYSEDIGIESVVGIRDGEITIFTVGGEEGEGFDVTNDLTISS 820

Query: 395  IPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV------RLLDDQTFEFIS---- 444
            I L   PR+      +  F +          ESE   +      + +D + FE       
Sbjct: 821  IKLRYAPRKQLKDSLTDYFFVI---------ESEFGVISPYLESKEVDAEYFEVFGYKKK 871

Query: 445  --------------------TYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEP 484
                                T+     E   S+ S    D+   Y  VGT   L      
Sbjct: 872  ENSWASCLQIVDVAGSGIEYTHEFTNNECTISLASIKIRDEE--YLIVGTTENLVYSPHY 929

Query: 485  TKGR-ILVFIVE---DGKLQLIAEKET--KGAVYSLNAFNGKLLAAINQKIQLY----KW 534
              G  I  F ++     K +L+   +T  +    SL AFN KLL     +++LY    K 
Sbjct: 930  YSGNSIYTFRIKRNAKKKPELVYLHKTTIEFPPSSLCAFNEKLLVGAGNQLRLYDVGRKQ 989

Query: 535  MLRDDGTR-ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
            +LR   T+ +         HI        GD IVV D  +S+S + +   +        D
Sbjct: 990  LLRKTSTKIDFLRRINKIQHI-------AGDVIVVCDSSESVSFMRFDQTKNQFIAFCND 1042

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTVR---------------KNSEGATDEERGRLE 638
                 ++A+E+LD    +  +   N+F  R               K  E        RL+
Sbjct: 1043 TAKRQITALEVLDSRTVIAGDRFGNIFVSRIPKNVAEQLENNVLMKFEEETLGASSSRLD 1102

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEK 697
             + +++  + V     GS V       VG   ++I+  + G +G++  L   Q +  L K
Sbjct: 1103 KLCDFYTQDIVTSLHKGSFV-------VGGSESIIYTGLQGTVGILLPLATTQEVDLLMK 1155

Query: 698  LQTNLRKVIK-------------GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
            L+ +LR                  + G  H ++R + N       +N +DGD IE F +L
Sbjct: 1156 LENSLRDYFNDSFDDFDNTKQGFNLVGREHLKFRGYYNP-----VENVIDGDFIERFFEL 1210

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL 770
            + +   +++  ++ S  ++ +++ +L
Sbjct: 1211 NPSAQVKLAGRLDKSPRDIERKIYDL 1236


>gi|320581947|gb|EFW96166.1| hypothetical protein HPODL_2449 [Ogataea parapolymorpha DL-1]
          Length = 1203

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 179/843 (21%), Positives = 335/843 (39%), Gaps = 126/843 (14%)

Query: 8    PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVV-TCSGAYKDGSLR 66
            P+ L  LNL        V ++E   N+ P++D  + +        V+ +  G     +L+
Sbjct: 401  PRPLENLNL--------VNIVE---NINPLIDAKLYNSNETTSLPVIYSLCGTGPRSALK 449

Query: 67   IVRNGIGINEQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEET 125
            ++ + +  +E  + EL  + + ++  + + DD +D ++V+SF+  T  L + + +++EE 
Sbjct: 450  VLNHELPFSEVVTQELPSVVQKVFVSKLNRDDEYDKYIVLSFVDGT--LVLRIGEDVEEV 507

Query: 126  EIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN--EWKSPPGYSVNVATAN 183
            E  G    T TL         LVQV    VR V       +   +W  P G  V   +A 
Sbjct: 508  ENSGLVLDTNTLGVFQVGSTALVQVHPNGVRQVFYVDETPQKTIDWAPPAGIRVLHCSAT 567

Query: 184  ASQVLLATGGGHLVYLEIG--DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMW 241
             SQ+ +A     +VY E+   D ++   +H +L  +I+ L +  +    +      V   
Sbjct: 568  NSQLAIALSNREIVYFELDDLDKLIEYNEHKELAAQITALTLGEVQAGTARFPYLLVA-C 626

Query: 242  TDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAF----------------------- 276
             D ++ +FS  P+  L   E +G EI+  +   L AF                       
Sbjct: 627  QDKTLTVFSTDPESTL---EIVGEEILSSAASSLMAFYMKDTAIVLNKDAGEDDEDEPEL 683

Query: 277  -EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDR 335
               + Y+   +  G      ++ +TGEL++ +    G +P+ L    +     V   S R
Sbjct: 684  ATSLLYVHIGMESGVYARLQMDPQTGELSNPRNKYTGPRPVQLSKIEAVGQNAVCIFSAR 743

Query: 336  PTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEG-ELTIGTIDDIQK-LHIR 393
              + Y+   +   + +      H C F S   P++  +A  G  LTI TID ++    I 
Sbjct: 744  TYLGYTRPSEFKITPLTKPVFQHACSFRSEDIPENGVLAVYGNSLTIMTIDQLENDTIIE 803

Query: 394  SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFIST-------- 445
            SI L   P+ +C                 C +++ M +V   D  T   I          
Sbjct: 804  SIALRNTPKYMC----------------DCTDKNGMMYVLEGDIDTKRDIEEERIEEYQQ 847

Query: 446  --YPLDTFEYGCSILSCSFSDDSNVYYC-VG--TAYVLPEENEPTKGRILVFIVEDGKLQ 500
              YP     +   I +   +D S V    +G  TA+     N  ++       V   K Q
Sbjct: 848  FGYPRAPGAWASCIQTVVVADKSVVQTIDLGDETAFRACWVNFESRPGEPFLAVSSAKNQ 907

Query: 501  LIAEKETKGA---VYSLNAFNGKL--------------LAAINQKIQL---YKWMLRDDG 540
             ++     GA   +Y +++ NG L              L A   K+ +    + +L D G
Sbjct: 908  QLSPPRNDGAYIHLYRISS-NGTLELFQTTKTEHLSLALTAFQGKLLVGAKNELILYDIG 966

Query: 541  TRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 599
             ++L            +  ++T+G  ++V D+  S+   +YK  E +  +   D     +
Sbjct: 967  QKQLVKRSSTRLECYEIVDLKTQGFRVIVSDVRDSVRYTVYKPLENSFVDFIDDTMQRHV 1026

Query: 600  SAVEILDDDIYLGAENNFNLFTVR--KNSEGATDEE---------RGRLEVVGEYHLGEF 648
            +   +LD D  +  +   N+  +R  +     +DE+         R +L+    Y++G+ 
Sbjct: 1027 TRTLLLDYDTVVVGDKFGNISVLRCPEQISEMSDEDNHGFLVKMRRTKLDNPVNYYVGDM 1086

Query: 649  VNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPH-EQYLFLEKLQTNLRKVIK 707
               F+ GSL        +G   ++I+G + G +G +  +    +  F ++LQ   R +I 
Sbjct: 1087 PTFFQKGSLT-------IGGAESIIYGCLQGQMGCLYPMKSLSEINFFKELQ---RLIIH 1136

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
                L   ++  F         KN +DGDLIE +  L   +   I+  M+    ++ +R+
Sbjct: 1137 EFTSLTDREYLKFKGYYNP--PKNSIDGDLIEEYYRLGPEKRIRIATKMDRLPRDIDRRI 1194

Query: 768  EEL 770
             ++
Sbjct: 1195 SDM 1197


>gi|183233163|ref|XP_654084.2| damaged DNA binding protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801703|gb|EAL48698.2| damaged DNA binding protein, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|449708240|gb|EMD47737.1| DNA-repair binding protein, putative [Entamoeba histolytica KU27]
          Length = 995

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 169/770 (21%), Positives = 325/770 (42%), Gaps = 124/770 (16%)

Query: 26  EVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI 85
           ++LE++ N G ++D     +  +    VV   G      L I   G GI E  S E+  I
Sbjct: 325 KILEKWSNFGSLMD--ARQISNREDYLVVGNGGGKGSIGLMI--KGSGIEELGSCEINDI 380

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDE---LEETEIEGFCSQTQTLFCHDA 142
           K + S+          +++V F  E+ I  +  + +   +EE+ ++    + + + C   
Sbjct: 381 KSVESIEYDRK----KYVIVGFEEESNIWEIYQQSKHIKIEESSLKKVIGKERVICC-GI 435

Query: 143 IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
           I  +L+ V    +  +    +  +N       +  +    N  Q +    G  L   +I 
Sbjct: 436 IKERLIFVCKKGIYSIDKHQK--KNTLMKFDSFITHAKFIN--QQIYFIYGTEL--FKIT 489

Query: 203 DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL 262
           + +  + K   LE  +SC DIN         +I  +G+W D ++ IF   D+N + K+  
Sbjct: 490 EELKIQ-KMKDLEQNVSCFDIN---------EIIVIGLW-DGNILIF---DINGVLKKTE 535

Query: 263 GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSL---GTQPITLR 319
             + I RS+L+       Y+ C   D  ++ FL N    + T + K+      +Q I L+
Sbjct: 536 VVDTIGRSILI--DHNKIYVGC---DNEIIVFLYNQMEEDCTYKNKLKYHIETSQSIKLK 590

Query: 320 TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNL-----KEVSHMCPFNSAAFPDSLAIA 374
              S            P VI  +NK   +    L     +++  +C   S      +  A
Sbjct: 591 KIYS-----------IPCVI--ANKTFTFQQTGLVPLAVEDLIDICE--SPVGDYGVICA 635

Query: 375 KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRL 434
            +  +  G + ++ ++  + I  GE+  +I            ++K+           + L
Sbjct: 636 TKRGIVFGLMKEMSRVTFKMIHSGENCCKIATDGSYGLLVGKTIKS-----------INL 684

Query: 435 LDDQTFEFISTYPLDTFEYGCSILS-CSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 493
           +D        ++ + T E   + L+ C  S + N+Y  VGTA +   E EP+ GRIL+  
Sbjct: 685 ID-------GSFGVTTIELKSNELALCVDSLEDNIY-AVGTAIIRENEIEPSSGRILLIR 736

Query: 494 VE-DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 552
            + +G + ++  ++  GAVY L      ++A IN+ + + +   +D  T++         
Sbjct: 737 QDTEGLIYIVGTEDYDGAVYCLKKCQKGIVAFINRNVHVIEKKGKDLNTKQ-----NMLL 791

Query: 553 HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI--- 609
            ++ + +    D+I+ GDL +S+S+  Y+++   ++   +D    W S V  ++ +    
Sbjct: 792 PLIGVSLDICKDYIIAGDLARSLSVYRYRNDIEHLDVVGKDNQIVWSSCVGSIESEYGTS 851

Query: 610 YLGAE--NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN----RFRHGSLVMRLPD 663
           +L A+   N  +F      E  TD+E+  + ++ + H+ + +N     F  G L+     
Sbjct: 852 FLVADVSGNIKIFN-SDEEEPKTDDEK--INLISQVHVADSINFIQKSFYKGCLM----- 903

Query: 664 SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE 723
                      G V+G I  I  +  E YLFL K+Q+ L K            WR   N 
Sbjct: 904 -----------GGVHGGIYNICEISKEHYLFLNKIQSKLVK----------SNWRESVNT 942

Query: 724 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
           ++     N +DGD IES L+ S  +   +++ + V  +E+ ++++ L  L
Sbjct: 943 QQASPMMNCIDGDKIESILEWSEKKQMLLAQKIGVEHQEMIEKIQSLFSL 992


>gi|432883539|ref|XP_004074300.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Oryzias latipes]
          Length = 1456

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 208/483 (43%), Gaps = 80/483 (16%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 985  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHFVSYHVES 1044

Query: 411  RTFAICSLKNQSCA---------------EESEMHFVRLLDDQTFEFIS-----TYP--- 447
            + +A+C+   + C                E  E +   L +  + + IS     T P   
Sbjct: 1045 KVYAVCTSVKELCTRIPRMTGEEKEFETIERDERYINPLQEKFSIQLISPVSWETIPNTR 1104

Query: 448  --LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + +      V     Y   GT  VL  E    +GRIL+      + E
Sbjct: 1105 IDLEEWEHVTCMKTVALRSQETVSGLKGYIAAGTC-VLQGEEVTCRGRILILDVIEVVPE 1163

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQS 546
             G      K +++ EKE KG V +L   +G L++AI QKI L  W L+D+   G   + +
Sbjct: 1164 PGQPLTKNKFKVLYEKEQKGPVTALCHCHGYLVSAIGQKIFL--WALKDNDLTGMAFIDT 1221

Query: 547  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            +   H  I      +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + 
Sbjct: 1222 QLYIHQMI------SIKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSIEFIV 1275

Query: 607  DDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP- 662
            D+  LG   ++ + NLF      E        RL    +++ G  +N       + R+P 
Sbjct: 1276 DNNQLGFLVSDRDKNLFVYMYLPEAKESFGGMRLLRRADFNAGAHINS------LWRMPC 1329

Query: 663  ----DSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
                DS   +  T        F T++G IG++  +  + Y  L  LQ  L  ++    GL
Sbjct: 1330 RGALDSGSKKALTWDNKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGL 1389

Query: 713  NHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            N + +R  ++ ++++    KN LDG+L+  +L LS     E++K +  + + +   + E+
Sbjct: 1390 NPKAFRMMHSNRRSLQNAVKNILDGELLAKYLYLSTMERSELAKKIGTTQDIILDDLLEI 1449

Query: 771  TRL 773
             R+
Sbjct: 1450 DRV 1452



 Score = 40.4 bits (93), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 41/172 (23%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 469 EVCDSILNIGPCANASMGEPAFLSEEFQSNPEPDLEIVVCSGYGKNGALSVLQRSIRPQV 528

Query: 77  QASVELQGIKGMWSLRS-----------------------STDDPFDT------FLVVSF 107
             + EL G   MW++ S                        T+ P +       FL++S 
Sbjct: 529 VTTFELPGCHDMWTVISGEDKKESEGGEKEADAEKKEEQDKTEPPLEDDAKKHGFLILSR 588

Query: 108 ISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
              T IL      E+ E +  GF +Q  T+F  +   NQ ++QV+   +RL+
Sbjct: 589 EDSTMILQTG--QEIMELDTSGFATQGPTVFAGNIGDNQYIIQVSPMGLRLL 638


>gi|307190910|gb|EFN74734.1| Cleavage and polyadenylation specificity factor subunit 1 [Camponotus
            floridanus]
          Length = 1418

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 39/332 (11%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  +GT Y   E+   ++GRIL+F     + E G      + + I  KE KG + ++   
Sbjct: 1093 YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1151

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 1152 SGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1203

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 629
            ISLL ++ E   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1204 ISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFFLADGESNLALFMYQPESRES 1263

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNGVIGV 683
               ++  L    ++HLG+ VN F      +  P +D  Q          ++ T++G +G 
Sbjct: 1264 LGGQK--LIRKADFHLGQKVNTFFRIRCRVSDPANDKKQFSGADKRHVTMYATLDGSLGY 1321

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN---EKKTVDAKNFLDGDLIES 740
            I  +P + Y  L  LQ  L   I  + GLN + +R         +   A+  +DGDL+  
Sbjct: 1322 ILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKSYRQTYKSYIRNQGNPARGIIDGDLVWR 1381

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
            +L L      +++K +   V+E+ + + E+ R
Sbjct: 1382 YLFLPNNEKTDVAKKIGTRVQEIIEDITEIDR 1413



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L +++  I      + EL G + MW++  + ++             F
Sbjct: 506 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGTLNNDEQVKAEAEGSHAF 565

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 566 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 620


>gi|242021233|ref|XP_002431050.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
            putative [Pediculus humanus corporis]
 gi|212516279|gb|EEB18312.1| Cleavage and polyadenylation specificity factor 160 kDa subunit,
            putative [Pediculus humanus corporis]
          Length = 1409

 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 194/438 (44%), Gaps = 66/438 (15%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE------ESEMHFVRLLDDQ------- 438
            +R +PL   P  + +  +S+T+ + +  ++   E      E + H V   DD+       
Sbjct: 978  VRKVPLRCTPHMVTYHLESKTYCLITSSSEPSNEYFRFNGEDKEHSVEDRDDRFPLPLQD 1037

Query: 439  TFEFISTYP------------LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEE 481
             F  +   P            LD +E+   + + + S +        Y  VGT Y    E
Sbjct: 1038 KFSIVLFSPVSWEVIPNTKMELDEWEHVTCVKTVNLSYEGTRSGLKGYVAVGTNYNY-SE 1096

Query: 482  NEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  +KGRIL++     + E G      + + +  KE KG V +L    G L+ A+ QKI 
Sbjct: 1097 DITSKGRILIYDIIEVVPEPGQPLTKNRFKTVYAKEQKGPVTALCHVLGFLVTAMGQKI- 1155

Query: 531  LYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
             Y W L+D+   G   + ++   H  I      +    I+V D+ KSISLL ++ E   +
Sbjct: 1156 -YIWQLKDNDLVGIAFIDTQIYIHQMI------SVKSLILVADVYKSISLLRFQEEYRTL 1208

Query: 588  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
               +RD+    + A+E+L D+  +G   ++   N+       E        +L    ++H
Sbjct: 1209 SLVSRDFRPCEVYAIELLLDNTQMGFLISDVEMNIIMYMYKPEDRDSVGGQKLLRKADFH 1268

Query: 645  LGEFVN-----RFRHGSLVMRLPDSDVG--QIPTVIFGTVNGVIGVIASLPHEQYLFLEK 697
            LG+ +N     R R G       D  +G  +    +F T++G +G +  +P + Y  L+ 
Sbjct: 1269 LGQHINSWFRIRCRLGDQAENY-DFPIGAEKRHISMFATLDGALGYLLPIPEKTYRRLQM 1327

Query: 698  LQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKT 755
            LQ  L   I  + GLN + +R + + +K +    K  +DG+LI  +L L+     +++K 
Sbjct: 1328 LQNILVYHIPHLAGLNPKAFRIYKSGRKLLGNPCKRIVDGELIWMYLSLTVMEKQDVAKK 1387

Query: 756  MNVSVEELCKRVEELTRL 773
            M   ++++ + +  + RL
Sbjct: 1388 MGSKMDDIIEDIAVIERL 1405



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 22/180 (12%)

Query: 47  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL---------RSSTDD 97
           R    ++VT SG  K+G++ +++  I      + EL G   MW++           + DD
Sbjct: 501 RDPDLELVTTSGHGKNGAICVLQRTIRPQVVTTFELPGCLDMWTVIGPQSDSGPTQAEDD 560

Query: 98  PFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVR 156
               FL++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   VR
Sbjct: 561 ISHAFLILSQKDSTMILQTG--QEINEVDHSGFNTQGPTIFAGNLASNKYIVQVSKAGVR 618

Query: 157 LVSSTSRELRNEWKSP--PGYSVNVATANASQVLLATGGGHLVYLEI----GDGILTEVK 210
           L+    R L      P   G SV  A+     V L T  G +V L +    G G L+  K
Sbjct: 619 LL----RGLEQIQHIPLDLGSSVVHASTADPYVALLTEDGQVVLLTLRESRGQGRLSVFK 674


>gi|403302917|ref|XP_003942095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Saimiri boliviensis boliviensis]
          Length = 1390

 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 200/474 (42%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 919  VDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 978

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 979  KVYAVATSTNTPCTRIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1038

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1039 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1097

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI  + W LR     EL     
Sbjct: 1098 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKI--FLWSLR---ASELTGMAF 1152

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1153 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1212

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1213 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1272

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1273 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1332

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1333 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1386


>gi|167395195|ref|XP_001741266.1| pre-mRNA-splicing factor rse-1 [Entamoeba dispar SAW760]
 gi|165894222|gb|EDR22283.1| pre-mRNA-splicing factor rse-1, putative [Entamoeba dispar SAW760]
          Length = 1145

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 164/795 (20%), Positives = 314/795 (39%), Gaps = 89/795 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            +E   R+ +L P++D  V      Q   ++    G     +++I++N +   +   +EL 
Sbjct: 385  LEEFYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELP 444

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
             I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E         T +L     
Sbjct: 445  AIPISVWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSECNTTPILLSTPSLLVSML 502

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH---LVYL 199
                 +QV +  + + S   ++   E +         A+ N S+++++    +   L+Y 
Sbjct: 503  SDGTFLQVMTDRIIVYSEPIQQFITENQK-----YVCASCNGSELIVSVEKNNQTALIYF 557

Query: 200  EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLIT 258
            +   G L  ++  +   +I+ L ++    +PS  Q  A+G   D SV + SL P+     
Sbjct: 558  QYQSGHLLTMERKENLAKITALALDQF--HPS--QHCAIGC-VDGSVHLLSLIPNETTKA 612

Query: 259  KEHLGGEIIPRSVLLCAFEGI---SYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQP 315
               +  +    SV    F  I   SYL   L +G L     +  +GE+ +     +G++P
Sbjct: 613  LSRVSLQTYDCSVNSLTFNIIDNKSYLFAGLSNGLLGRSTYDPISGEINESSLNFVGSRP 672

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            +TL          V A S R  + Y +  K+  + +N++  +  C        +++AI  
Sbjct: 673  VTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAIIC 732

Query: 376  EGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM----- 429
            E  + I TI+     L  ++I L   PR+I          I    N SC   +E+     
Sbjct: 733  EKVMKIITIESTSSSLTGKNIQLSYTPRKIITHPTIPLLYILEGDNNSCKVGNEIIQTNE 792

Query: 430  ----HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSDDSNVYYCVGTAYVLPEEN 482
                  + +LD    E I     D  ++   GC + S S    +  Y  VG   +   + 
Sbjct: 793  GNWVGGIHILDASQDELIQFIDFDNNKHPTAGCVVRSIS---KNQTYLIVGV--IESYKT 847

Query: 483  EPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWM 535
             P + +   I V+I+ +  +      + +  V +   F G +LA +   ++LY    K +
Sbjct: 848  RPIQWKSSEIQVYIINEHSINYCYSTKVEYPVRAFAEFKGMVLAGVGNVLRLYDIGLKSL 907

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L+    R+L S+           +   G+ I++  +    +L+ Y       +  A D  
Sbjct: 908  LKKAEKRQLASDVAQ--------LHVIGETILLTGISDGFNLIRYNQINHKFDIYA-DSL 958

Query: 596  ANWMSAVEILDDDIYLGAENNFNLF-----------------TVRKNSEGATDEERGRLE 638
              W+     L+    L ++    +F                 T+ +  +   +    ++ 
Sbjct: 959  PRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEKALSPFSTLLQPHKTIYEGSNYKMV 1018

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFL 695
               ++ +G+    F   SL+   P          IF   N + G+ A +P        F 
Sbjct: 1019 TATQFFIGDIATSFAQCSLIPGAPS---------IFLYSNFMGGLSALIPLQNQNDIDFY 1069

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
            + L+ ++R     +   NH  +RS       V  K+ +DGDL E +  L      EI++ 
Sbjct: 1070 QHLEMHMRVHWTNLTDRNHISFRS-----SMVPVKDTVDGDLCELYERLPYEIQQEIAEE 1124

Query: 756  MNVSVEELCKRVEEL 770
            M   V E+ K++ +L
Sbjct: 1125 MEKEVNEIIKKLHDL 1139


>gi|440904368|gb|ELR54893.1| Cleavage and polyadenylation specificity factor subunit 1, partial
            [Bos grunniens mutus]
          Length = 1417

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 963  IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1022

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1023 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1082

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1083 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1141

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1142 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1196

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1197 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1256

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1257 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1310

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1311 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1370

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1371 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSPMERGELAKKIGTT 1416


>gi|358415280|ref|XP_003583063.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Bos taurus]
          Length = 1490

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 1019 IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1078

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1079 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1138

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1139 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1197

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1198 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1252

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1253 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1312

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1313 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1366

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1367 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1426

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1427 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1472


>gi|27807297|ref|NP_777145.1| cleavage and polyadenylation specificity factor subunit 1 [Bos
            taurus]
 gi|1706101|sp|Q10569.1|CPSF1_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit
 gi|929007|emb|CAA58152.1| cleavage and polyadenylation specificity factor, 160 kDa subunit [Bos
            taurus]
 gi|296480730|tpg|DAA22845.1| TPA: cleavage and polyadenylation specificity factor subunit 1 [Bos
            taurus]
          Length = 1444

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/466 (23%), Positives = 193/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 973  IDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1032

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1033 KVYAVATSTSTPCTRVPRMTGEEKEFETIERDERYVHPQQEAFCIQLISPVSWEAIPNAR 1092

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1151

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1206

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1207 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1266

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1267 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1320

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1321 AEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1380

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1381 AFRMLHVDRRVLQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1426


>gi|229335612|ref|NP_001108153.2| cleavage and polyadenylation specificity factor subunit 1 [Danio
            rerio]
          Length = 1449

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 209/477 (43%), Gaps = 68/477 (14%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 978  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1037

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFI--ST 445
            + +A+C+   + C        EE E   +                +L+   ++E I  + 
Sbjct: 1038 KVYAVCTSVKEPCTRIPRMTGEEKEFETIERDERYIHPQQDKFSIQLISPVSWEAIPNTR 1097

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + +      V     Y  +GT  +  EE    +GRIL+      + E
Sbjct: 1098 VDLEEWEHVTCMKTVALKSQETVSGLKGYVALGTCLMQGEEVT-CRGRILILDVIEVVPE 1156

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQS 546
             G      K +++ EKE KG V +L   +G L++AI QKI L  W L+D+   G   + +
Sbjct: 1157 PGQPLTKNKFKVLYEKEQKGPVTALCHCSGFLVSAIGQKIFL--WSLKDNDLTGMAFIDT 1214

Query: 547  ECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            +     +I  +Y  +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + 
Sbjct: 1215 QL----YIHQMY--SIKNFILAADVMKSISLLRYQPESKTLSLVSRDAKPLEVYSIEFMV 1268

Query: 607  DDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD 663
            D+  LG   ++ + NL       E        RL    ++++G  VN F        L  
Sbjct: 1269 DNNQLGFLVSDRDKNLMVYMYLPEAKESFGGMRLLRRADFNVGSHVNAFWRMPCRGTLDT 1328

Query: 664  SDVGQIP-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
            ++   +         F T++G +G++  +  + Y  L  LQ  L  ++    GLN + +R
Sbjct: 1329 ANKKALTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPKAFR 1388

Query: 719  SFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              + +++T+    KN LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1389 MLHCDRRTLQNAVKNILDGELLNKYLYLSTMERSELAKKIGTTPDIILDDLLEIERV 1445


>gi|348555854|ref|XP_003463738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 1 [Cavia porcellus]
          Length = 1440

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 199/480 (41%), Gaps = 74/480 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTSTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1089 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1147

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1316

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1317 TEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1376

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1377 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1436



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 462 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 521

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDT----------FLVVSFISETR 112
             + EL G   MW++                S  +P             FL++S    T 
Sbjct: 522 VTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAEDDGRRHGFLILSREDSTM 581

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 582 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 631


>gi|380014171|ref|XP_003691113.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Apis florea]
          Length = 1583

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 229/516 (44%), Gaps = 80/516 (15%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRHCMMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICS-----LK 419
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +     LK
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVITSIAEPLK 1016

Query: 420  N---------QSCAEESEMHFVRLLDDQ----TFEFIS--TYP-----LDTFEYGCSILS 459
            +         +   EE    F+    +Q     F  +S  T P     LD +E+   + +
Sbjct: 1017 SYYRFNGEDKEFTEEERPDRFIYPSQEQFSIVLFSPVSWETIPNTKIELDQWEHVTCLKN 1076

Query: 460  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIA 503
             S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + + I 
Sbjct: 1077 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1135

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 560
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1136 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1189

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 615
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1190 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLVADGES 1247

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVG 667
            N  LF  +  S  +   +  +L    ++HLG+ VN F    +  R+ D        SD  
Sbjct: 1248 NIALFMYQPESRESLGGQ--KLIRKADFHLGQKVNTFFR--IRCRISDPANDKKHFSDAD 1303

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            +    ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R++ +  +T 
Sbjct: 1304 KRHVTMYASLDGNLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSHIRTQ 1363

Query: 728  --DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
               A+  +DGDL+  +L L      +++K +   VE
Sbjct: 1364 GNPARGIIDGDLVWRYLYLPNNEKIDVAKKIAPIVE 1399



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L ++++ I      + EL G + MW++  + ++             F
Sbjct: 505 ELVTTSGYGKNGALCVLQHSIRPQVVTTFELPGCEDMWTVIGTLNNDEQIRPEAEGSHAF 564

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T IL      E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+   
Sbjct: 565 LILSQEDSTMILQTG--QEINEVDQSGFSTQGSTIFAGNLGANRYIVQVTQMGVRLLQGI 622

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQ 213
             E         G  +  A+     V L +  G ++ L + +G  T   HAQ
Sbjct: 623 --EQIQHMPIDLGCPIVHASCADPYVTLLSEDGQVMLLTLREGRGTARLHAQ 672


>gi|410911304|ref|XP_003969130.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Takifugu rubripes]
          Length = 1444

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 200/467 (42%), Gaps = 76/467 (16%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 973  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1032

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFISTYP 447
            + +A+C+   + C        EE E   +                +L+   ++E I    
Sbjct: 1033 KVYAVCTSLKELCTRIPRMTGEEKEYETIERDERYINPQQDKFSIQLISPVSWEAIPNTR 1092

Query: 448  LD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
            +D   +EY   + + +      V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1093 IDLEEWEYVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILDVIEVVPE 1151

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD-DGTRELQSEC 548
             G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D D T     + 
Sbjct: 1152 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDNDLTGMAFIDT 1209

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
              H H +     +  +FI+  DLMKS+SLL Y+ E   +   +RD     + ++E + D+
Sbjct: 1210 QLHIHQM----MSIKNFILAADLMKSVSLLRYQEESKTLSLVSRDAKPLEVYSIEFMVDN 1265

Query: 609  IYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS- 664
              LG   ++ + NL+      E        RL    +++ G  +N F       R+P   
Sbjct: 1266 NQLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------WRMPCRG 1319

Query: 665  --DVGQIPTVI--------FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNH 714
              + G    +         F T++G +G++  +  + Y  L  LQ  L  ++    GLN 
Sbjct: 1320 ALEAGSRKAMTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLSHHAGLNP 1379

Query: 715  EQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + +R  + +++++    KN LDG+L+  +L LS     E++K +  +
Sbjct: 1380 KAFRMLHCDRRSLQNPVKNILDGELLNKYLYLSMMERSELAKKIGTT 1426



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 35/171 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       +VV CSG  K+G+L +++  I    
Sbjct: 465 EVCDSILNIGPCANASMGEPAFLSEEFQSNPEPDLEVVVCSGHGKNGALSVLQRSIRPQV 524

Query: 77  QASVELQGIKGMWSL-----------------RSSTDDPFDT------FLVVSFISETRI 113
             + EL G   MW++                 +  T+ P +       FL++S    T I
Sbjct: 525 VTTFELPGCHDMWTVISNEPVQKEQEETEREGKEKTEPPAEEDTKKHGFLILSREDSTMI 584

Query: 114 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           L      E+ E +  GF +Q  T+F  +   N+ ++QV+   +RL+   ++
Sbjct: 585 LQTG--QEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLLEGVTQ 633


>gi|339259094|ref|XP_003369733.1| splicing factor 3B subunit 3 [Trichinella spiralis]
 gi|316965959|gb|EFV50595.1| splicing factor 3B subunit 3 [Trichinella spiralis]
          Length = 1241

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 195/466 (41%), Gaps = 57/466 (12%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L  L +Q D            ++L PI+ F V D+  +   Q+    G    
Sbjct: 419 TFFFAPRGLQNL-IQVD----------ELLSLSPIMSFEVADIVYEDTPQLYAACGRGPR 467

Query: 63  GSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMN-LED 120
            S++++R+G+ + E A  EL G    +W+++   D  +D ++VVSF++ T +L++    +
Sbjct: 468 SSIKVLRHGLEVTEMAISELPGNPNAVWTVKKHQDAEYDAYIVVSFVNATLVLSIGETVE 527

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVA 180
           E+ ++ + G                  VQ+    +R +    R   NEWK P    +   
Sbjct: 528 EVTDSVVLGVVD---------------VQIYPEGIRHIRCDRR--VNEWKVPGRRVITNC 570

Query: 181 TANASQVLLATGGGHLVYLEIGDG----ILTEVKHAQLEYEISCLDINPIGENPSYSQIA 236
             N  QVL+A  GG +VY E+ +G      TE K    +     L   P GE     +  
Sbjct: 571 AVNCRQVLIALNGGEIVYFELDEGGQLNEYTERKEMPCDVVAMALADIPPGE--IRCRFL 628

Query: 237 AVGMWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGI---SYLLCALG----- 287
           AV + TD +VR+ SL   + +T  ++     + +S+ + A  G    S L   +G     
Sbjct: 629 AVAL-TDRTVRVISLDPSDCLTPLNMQSLPAMAQSLCIAAVGGDTMESTLFLNIGLEVNK 687

Query: 288 --DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTT--------HVFAASDRPT 337
             +G LL  +L+  TGEL D +   LG +P+ L      +          ++ A S R  
Sbjct: 688 FTNGVLLRTVLDSVTGELQDTRTRYLGMKPVKLFKVKMHDNIAVMNSVQLNIIAMSSRAW 747

Query: 338 VIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKL-HIRSIP 396
           ++Y    +   + ++   + +   F S   P+ +       L I  I+++  + +  S  
Sbjct: 748 LLYKYQTRYHLTPLSYIPLEYASNFASDQCPEGVVAIAGNSLRILAIENLGTIFNYSSFQ 807

Query: 397 LGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 442
           L   PRR     ++         + S   +++M    +L  +  E 
Sbjct: 808 LSHTPRRFVFHPETGNIITVETDHNSLTTQTKMKRREILAKEMIEL 853



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 27/283 (9%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILA 556
            +L+++       AV +L +F G+LLA+  + +++Y     D G ++L  +C   H   L 
Sbjct: 970  RLEMMHRTTVDEAVTALASFRGRLLASAGKMLRIY-----DLGKKKLLRKCENKHMPNLI 1024

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
             ++ T G  I VGD+ +S+    YK  E  +   A D +  + SA+ ILD D       +
Sbjct: 1025 THILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVALRLPS 1084

Query: 617  FNLFTVRKNS--------EGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQ 668
                 V+++         +G  +    + E+V  +++GE V   +   L+        G 
Sbjct: 1085 DCTDDVQEDPTGIRALWDKGILNGASQKCEMVATFYVGECVTCLQKAMLI-------PGS 1137

Query: 669  IPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
              ++++ T++G+IG +      E Y F + L+ +LR     + G +H  +RSF       
Sbjct: 1138 SESLVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTEYPPLCGRDHLAYRSF-----YA 1192

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              K  +DGDL E +  L   +  EIS  ++    E+ K++E++
Sbjct: 1193 PVKGVIDGDLCEQYCLLEYGKQKEISNELDRVPSEIMKKLEDI 1235


>gi|307191845|gb|EFN75271.1| Cleavage and polyadenylation specificity factor subunit 1
            [Harpegnathos saltator]
          Length = 1214

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  +GT Y   E+   ++GRIL+F     + E G      + + I  KE KG + ++   
Sbjct: 890  YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 948

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            +G L+ A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 949  SGFLVTAVGQKI--YIWQLKDNDLVGIAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1000

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 629
            ISLL ++ +   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1001 ISLLRFQEKCRTLSLVSRDFRPAEVYTIEYLIDNTNLGFLIADGESNLALFMYQPESRES 1060

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPD--------SDVGQIPTVIFGTVNGVI 681
               ++  L    ++HLG+ +N F    +  R+ D        SD  +    ++ +++G +
Sbjct: 1061 LGGQK--LIRKADFHLGQKINTFFR--IKCRVTDVASDKKHFSDADKKHVTMYASLDGSL 1116

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN--EKKTVDAKNFLDGDLIE 739
            G +  +P + Y  L  LQ  L   I  + GLN + +R++ +    +   A+  +DGDL+ 
Sbjct: 1117 GYVLPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYRTYKSYVRNQGNPARGIIDGDLVW 1176

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
             +L L      +++K +   V+E+ + + E+ R
Sbjct: 1177 RYLSLPNNEKADVAKKIGTRVQEIIEDITEIDR 1209



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---------FDTF 102
           ++VT SG  K+G+L +++  I      + EL G + MW++  S ++             F
Sbjct: 304 ELVTTSGYGKNGALCVLQRSIRPQVVTTFELPGCEDMWTVIGSLNNDEQVKSETEGSHAF 363

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           L++S   E   + +    E+ E +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 364 LILS--QEDSTMVLQTGQEINEVDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 418


>gi|195056749|ref|XP_001995154.1| GH22991 [Drosophila grimshawi]
 gi|193899360|gb|EDV98226.1| GH22991 [Drosophila grimshawi]
          Length = 1426

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 198/435 (45%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSC-------AEESEM-------HFVR---- 433
            +R +PL   PR++ +  ++R + + + K +          E+ E+        F+     
Sbjct: 997  VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEECRGERFIYPIGS 1056

Query: 434  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1057 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1115

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1116 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1174

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1175 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1230

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1231 SRDFNPMEVFGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLLRKADYHL 1288

Query: 646  GEFVN-RFR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   VI+G+++G +G    LP + Y     LQ 
Sbjct: 1289 GQVVNTMFRVQCHQRGLHQRQPFLYENK-HLVIYGSLDGALGYCLPLPEKVYRRFLMLQN 1347

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L      + GLN +++R+  + KK     ++  +DGDLI SF  L+ +  +E++K +  
Sbjct: 1348 VLLSYQDHLCGLNPKEYRTIKSVKKLGINPSRCIIDGDLIWSFRMLAHSERNEVAKKIGT 1407

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ R+
Sbjct: 1408 RTEEILADLLEIERI 1422



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 26/160 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 455 EVCDSLINVAPINYMCAGERVEFEEDGATLRPHADNLNDLKIELVAATGHSKNGALSVFV 514

Query: 70  NGIGINEQASVELQGIKGMWSL-----RSSTDDPFDT--FLVVSFISETRILAMNLEDEL 122
           N I      S EL+G   +W++     R +T    D   F+++S  S T +L      E+
Sbjct: 515 NCINPQIITSFELEGCLDVWTVFDDATRKATTARQDQHDFMLLSQRSSTLVLQTG--QEI 572

Query: 123 EETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
            E E  GF     T++  +    + +VQVT+  VRL+  T
Sbjct: 573 NEIENTGFTVNQPTIYVGNLGQQRFIVQVTTRHVRLLQGT 612


>gi|354547430|emb|CCE44165.1| hypothetical protein CPAR2_503890 [Candida parapsilosis]
          Length = 1171

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 167/747 (22%), Positives = 295/747 (39%), Gaps = 98/747 (13%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +++ ++S D   D +LV++     + L +++ + +EE     F     T+       + +
Sbjct: 453  VFTAKTSADAMDDEYLVITSTLAFKTLVLSIGEVIEEVNDSKFVMDQPTVAVQQVGKSSI 512

Query: 148  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILT 207
            VQV S  +R ++   +     W  P G ++  AT N  QVLL      LVY E  D    
Sbjct: 513  VQVYSNGLRHINGKKK--VTNWYPPAGITITHATTNNQQVLLGMSNLELVYFET-DPEDD 569

Query: 208  EVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEII 267
            +++  Q   E+S   I  +      S  A VG  +D ++ + SL   N +  + L     
Sbjct: 570  QLREYQDRLEVSS-PIRSMCIPKEQSSFAVVGC-SDETISVVSLQSQNCLQVKSLQALSS 627

Query: 268  PRSVLLCAFEGISYLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFS-SK 324
              + L+      S  L  +G  +G  +   ++   G+L+D +   LG +P+TL     S 
Sbjct: 628  SANSLVMLTHNPSTTLIHIGMDNGVYVRTKIDTFNGKLSDTRIKYLGPKPVTLNELKLSD 687

Query: 325  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNS---------AAFPDSLAIAK 375
            + T V A S +P + Y    K   + +   ++ +   F S           + D+L I  
Sbjct: 688  DITGVLAISTKPWIGYFYQGKYRCTPLLDIDIINGASFKSEDIGGEGIVGIYDDNLVIFS 747

Query: 376  EGELTIGTIDDIQKLHIRSIPLGEHPRRICH-QEQSRTFAICSLKNQSCAEESEM----H 430
             G+      D  Q+L +  + L   PR+I    +  + F          A E EM     
Sbjct: 748  VGKED-SIFDPNQELTVTELNLRYTPRKIVKGGDDDKLF----------ASEVEMGINTP 796

Query: 431  FVRLLDDQTFEFIST--YPLDTFEYGCSILSC-------------SFSDDSNVYYCV--- 472
            +V  L       +    Y    FE G    SC              F  D  +   V   
Sbjct: 797  YVSNLTKDVENGVDPEYYEAFGFERGPGCASCVQLIENGEIKQSLEFVKDQRIVDMVKIQ 856

Query: 473  --GTAYVLPEENEPTKGRILVFIVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
                 Y++    +  +  +  F ++  + LQ I + + K     +  F  +LL A    I
Sbjct: 857  FNKNQYLIVGVTKQEENLLYTFKIDKKRNLQYIHKTQLKYVPQVMEVFQNRLLVASGNAI 916

Query: 530  QLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG 585
             LY    + +LR   TR           I+ +  Q R D I++ D   SI    + +EE 
Sbjct: 917  SLYELGQRQLLRKSLTR-----IDFVQSIVKVSPQPR-DRILLADSANSIVFAKFDNEEN 970

Query: 586  AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG---------- 635
                 A D     ++A + LD D  +G +   N+F  R + E +   ++           
Sbjct: 971  QFIPVADDVVKRNITAWKQLDYDTIIGGDKFGNIFVTRLDREESKQVDQDWTVLKQAAQN 1030

Query: 636  ---------RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS 686
                     +L+ + +Y++ + +  F+ GS        ++G    +I+  V G IGV+  
Sbjct: 1031 SSNLNSCVFKLQNLCQYYIPDIITSFQLGSF-------NLGGEECIIYTGVMGTIGVLIP 1083

Query: 687  LPHEQYLFLE---KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            L  +  + L    +LQ  +      V G NH + RS+ N +     KN  DGD +E +  
Sbjct: 1084 LLSKSEIELVHDLQLQIGIWNDGVNVAGKNHGKLRSYYNPR-----KNVYDGDFLELYFA 1138

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEEL 770
            +      +I+K +N SV E+ K++ ++
Sbjct: 1139 IPLDVKVKIAKKLNKSVGEIEKKLNDI 1165


>gi|296086939|emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 50/368 (13%)

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLP--EENEPTKGR 488
           +R+LD +T        L   E   SI + +F D +      VGTA  L    +     G 
Sbjct: 583 IRILDPRTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLAVGTAKSLQFWPKRSFDAGY 642

Query: 489 ILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQS 546
           I ++  +EDGK L+L+ + + +G   +L  F G+LLA I   ++LY     D G R L  
Sbjct: 643 IHIYRFLEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGSVLRLY-----DLGKRRLLR 697

Query: 547 ECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
           +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A   +
Sbjct: 698 KCENKLFPNTIVSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDSVPRWLTASYHI 757

Query: 606 DDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHLGE 647
           D D   GA+   N++ VR                  K  +G  +    ++E + ++H+G+
Sbjct: 758 DFDTMAGADKFGNIYFVRLPQDVSDEVEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHVGD 817

Query: 648 FVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVI 706
            V   +  SL+        G    +I+GTV G +G ++A    +   F   L+ ++R+  
Sbjct: 818 VVTCLQKASLI-------PGGGECIIYGTVMGSLGALLAFTSRDDVDFFSHLEMHMRQEH 870

Query: 707 KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVSVEE 762
             + G +H  +RS          K+ +DGDL E F    LDL R   DE+ +T      E
Sbjct: 871 PPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPG----E 921

Query: 763 LCKRVEEL 770
           + K++EE+
Sbjct: 922 ILKKLEEV 929



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 6/187 (3%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            QP    + V + ++  +L PI+D  V +L  +   Q+    G     S+RI+R G+ I+
Sbjct: 246 FQPRGLKNLVRI-DQVESLMPIMDMKVSNLFEEETPQIFALCGRGPRSSIRILRPGLAIS 304

Query: 76  EQASVELQGI-KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           E A  +L G+   +W+++ + +D FD ++VVSF + T +L++   + +EE    GF   T
Sbjct: 305 EMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANATLVLSIG--ETVEEVSDSGFLDTT 362

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGG 194
            +L       + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG
Sbjct: 363 PSLAVSLIGDDSLMQVHPSGIRHIREDGR--INEWRTPGKRTIVKVGSNRLQVVIALSGG 420

Query: 195 HLVYLEI 201
            L+Y E+
Sbjct: 421 ELIYFEV 427


>gi|195381337|ref|XP_002049409.1| GJ21566 [Drosophila virilis]
 gi|194144206|gb|EDW60602.1| GJ21566 [Drosophila virilis]
          Length = 1420

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 197/435 (45%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLK-------------NQSCAEESE---------- 428
            +R +PL   PR++ +  ++R + + + K             ++  +EES           
Sbjct: 991  VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1050

Query: 429  MHFVRLLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
            +  + L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1051 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1109

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1110 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1168

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1169 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1224

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1225 SRDFNPLEVFGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1282

Query: 646  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   VI+GT++G +G    LP + Y     LQ 
Sbjct: 1283 GQVVNTMFRVQCHQRGLHHRQPFLYENK-HLVIYGTLDGALGYCLPLPEKVYRRFLMLQN 1341

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L      + GLN +++R+    KK     ++  +DGDLI S+  L+ +   E++K +  
Sbjct: 1342 VLLSYQDHLCGLNPKEYRTIKTVKKMGINPSRCIIDGDLIWSYRMLAHSERSEVAKKIGT 1401

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ RL
Sbjct: 1402 RTEEILADMLEIERL 1416



 Score = 39.3 bits (90), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 26/160 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 449 EVCDSLINVAPINYMCAGERVEFEEDGSTLRPHAESLNEVKIELVAATGHSKNGALSVFV 508

Query: 70  NGIGINEQASVELQGIKGMWSL-RSSTDDPFDT------FLVVSFISETRILAMNLEDEL 122
           N I      S EL G   +W++   +T  P         F+++S  S T +L      E+
Sbjct: 509 NCINPQIITSFELDGCLDVWTVFDDATRKPTTARQEQHDFMLLSQRSSTLVLQTG--QEI 566

Query: 123 EETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
            E E  GF     T++  +    + +VQVT+  VRL+  T
Sbjct: 567 NEIENTGFTVNQPTIYVGNLGQQRFIVQVTTRHVRLLQGT 606


>gi|224004656|ref|XP_002295979.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
           associated protein [Thalassiosira pseudonana CCMP1335]
 gi|209586011|gb|ACI64696.1| spliceosome associated factor 3b, subunit 3; 130kD spliceosome
           associated protein [Thalassiosira pseudonana CCMP1335]
          Length = 1212

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 44/410 (10%)

Query: 33  NLGPIVDFCVVDLE-RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKG-MWS 90
           +L P++   V +L   +   Q+    G     SLR++R+G+ + E A  EL G+ G +++
Sbjct: 386 SLAPVISVLVGELAGNEVSPQLYALCGRGPTSSLRVLRHGLSVTELAVSELPGVPGAVFN 445

Query: 91  LR----SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIE-GFCSQTQTLFCH----- 140
           +R    +     +D ++VVSF   T +L++   + +EE   E GF +   TL C      
Sbjct: 446 VRDDQAAKNGKFYDRYIVVSFADATLVLSVG--ETVEEMGKESGFLTTEPTLACSALGNG 503

Query: 141 --DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 198
                   +VQV  G VR +    R   ++W  P    +  A+AN SQ+L+A  GG L+Y
Sbjct: 504 GNGEQEGGIVQVYPGGVRHIQ---RGSVSQWHVPGIKKIECASANESQILIALVGGELIY 560

Query: 199 LEIG--DGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNL 256
            E+    G L E     +  ++  LD+  + +  S S  AAVG   D +VR+ SL   +L
Sbjct: 561 FELDPLSGNLMEAATKDVGADVCSLDVGAVPKGKSRSLFAAVG-CRDSTVRLLSLAPGSL 619

Query: 257 ITKEHLG--GEIIPRSVLL---CAFEGISYLLCALG--DGHLLNFLLNMKTGEL-TDRKK 308
           + ++     G   P SV L      +G   +  ++G  DG  L   ++  TG + T   +
Sbjct: 620 LEQKSSTTLGTTRPHSVALSNGVGSDGAGEITLSVGLDDGSALRAGVDPITGAMSTSPSR 679

Query: 309 VSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP 368
             LG +P+ +     + +      S RP +  +   +   + ++   + H C F++ A  
Sbjct: 680 RFLGARPVAVSRVMIEGSPSTLLLSSRPWIGRAGQGRHALAPMSYAPLDHGCSFSNEAVR 739

Query: 369 DS-----------LAIAKEG--ELTIGTIDDIQKLHIRSIPLGEHPRRIC 405
           +            L++ + G  ++ +G  DD +  +   I L   PR++C
Sbjct: 740 EGIVATSGSTLRILSVGESGGNDVVLGAEDD-EAFNSTRIGLRYTPRQMC 788



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 36/300 (12%)

Query: 489  ILVFIVEDGKLQLIAEKETK-GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
            +L  +V   +LQL+       G V SL  F G+LL  + + ++LY+      G R+L  +
Sbjct: 924  VLYRVVNGERLQLLHRTTVDDGPVLSLVHFQGRLLVGVGKTVRLYEM-----GKRQLLKK 978

Query: 548  CGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILD 606
            C   G   +   +Q  GD   VGD+M+S+  + Y      +   A+D N   ++  E+LD
Sbjct: 979  CELRGMPTMVKTLQAAGDRAFVGDMMQSMQFIRYDSTANRLVLVAKDRNPRPITCQELLD 1038

Query: 607  -DDIYLGAE-NNFNLFTVRKNSEG--------------ATDEERGRLEVVGEYHLGEFVN 650
             + + +G +  N  +  + + ++               A D+   +LE +  YH+GE V 
Sbjct: 1039 INTVAVGDKFGNVTILRLPRGADAGAIDVTGTRALWDSARDDATPKLETLCTYHVGEVVT 1098

Query: 651  RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGV 709
                 SLV        G   ++I+ TV G +G        +   F   L+  LR      
Sbjct: 1099 SMTRASLV-------AGGAESLIYVTVTGRVGAFVPFTSRDDVEFYTSLEGFLRTETPRP 1151

Query: 710  GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
             G + + +RS+         K+ +DGDL ++F  L      +I+++++ SV E+ K++E+
Sbjct: 1152 TGRDPQSYRSYY-----APMKHIVDGDLCDAFAQLPYETKQKIAESLDRSVGEVMKKLED 1206


>gi|328771718|gb|EGF81757.1| hypothetical protein BATDEDRAFT_34564 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1248

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 162/664 (24%), Positives = 273/664 (41%), Gaps = 79/664 (11%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGI-NEQASVELQGIKGMWSL 91
            N GP +DFC+ D        +   +GA   G ++ +R+G+G+  +  + +  G   +W L
Sbjct: 439  NAGPTLDFCLADTLGNNTDTLYMTAGAAPLGYIQEIRHGVGVLIDDTTKQFDGAIKLWGL 498

Query: 92   RSSTDDPFDTFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQTL---FCHDAIYNQL 147
            R+S +D  D+ LV SF++ TRI+ M  +DE E+ ++I GF     TL    C  + Y   
Sbjct: 499  RTSCEDTVDSLLVASFVASTRIMYMQ-DDEFEDISDISGFTIDVATLNTAACFVSGY--F 555

Query: 148  VQVTSGSVRLVSSTSRELRN------EWKSPPGYSVNVATANASQVLLA-TGGGHLVYLE 200
            +QV    + +      +  N       W  P  + V  +      VLL  TG   L+ L+
Sbjct: 556  IQVHLHGIIIARPLLDKTINNNTCTANWSPPNDHKVGFSAFYQDCVLLTLTGENSLMLLK 615

Query: 201  IGDGILTEVKHAQLEYEIS-CLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK 259
            +   I+ E  + Q+E   S  LDI P  +   YS        T I+V     P    I K
Sbjct: 616  V---IIQENSNVQIESISSISLDIEPSSQ--YYS--------TPINV-----PHSICIIK 657

Query: 260  EHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
                 EI  RS  L +     +LL  + DG LL+F L+ +  ++     V L      L 
Sbjct: 658  ---SKEISSRSNALISKP---HLLIGIRDGALLDFTLDFENDQINFMPPVILQLGDCPLD 711

Query: 320  TFSSKNT----THVFAASDRP-TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS-LAI 373
               S +T     +V   +++   +  S    +  S +  K + H   F   A  D+    
Sbjct: 712  LVYSHHTDPLDRYVLGVTNQTWQLSVSPIGGIRISQLLHKPILHAARFLYDADVDTGFLF 771

Query: 374  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVR 433
                 L+   +D     HIR+I +G+ PRRI     ++   +    +Q  A+E  +  V+
Sbjct: 772  LTSDTLSFVKVDPESGYHIRNINMGDTPRRILVDPVTKLLVVAG-SSQGDADEI-LTTVK 829

Query: 434  LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI 493
            +++  T +  +T  L   E   S++       +  Y C+GT          T GR+LVF 
Sbjct: 830  VMNPDTGQVYATERLAANETIHSLIVWHVK-PTKRYICMGTRI------HATSGRVLVFG 882

Query: 494  VEDG------KLQLIAEKETKGAVYSLNAF-NGKLLAAINQ-----KIQLYKWMLRDDGT 541
            ++        K  L+ +    G V +L  F N  LLA+        KI+     +    +
Sbjct: 883  LKPATKNKHIKFTLMGQYTLNGPVLALCTFVNSYLLASAGSTLYQLKIEAVHRTITAGAS 942

Query: 542  RELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
             ++ S       I AL  Q     I + +   SIS+  +     A      D  +   S 
Sbjct: 943  IDINSII---TRIHALKTQ-----IFIANTQDSISVYKFDIATKAFAFIKSDVTSRVGSE 994

Query: 602  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERG----RLEVVGEYHLGEFVNRFRHGSL 657
               LDD + +G + + N++ +  N    +D         ++   E+H+ + V + + GS+
Sbjct: 995  CFPLDDSLVIGTDRHGNIYGLDTNQGEDSDTHESTDSQSMQTGFEFHILDIVLQLKPGSM 1054

Query: 658  VMRL 661
              RL
Sbjct: 1055 KHRL 1058


>gi|195455711|ref|XP_002074834.1| GK23274 [Drosophila willistoni]
 gi|194170919|gb|EDW85820.1| GK23274 [Drosophila willistoni]
          Length = 1463

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 115/477 (24%), Positives = 212/477 (44%), Gaps = 67/477 (14%)

Query: 355  EVSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQ 409
            EV     FN+   P+  L      EL I  +           +R +PL   PR++ +  +
Sbjct: 992  EVRSFAAFNNINIPNGFLFFDTTFELKISVLPSYLSYDSTWPVRKVPLRCTPRQLVYHRE 1051

Query: 410  SRTFAICSL-------------KNQSCAEESE-MHFVR---------LLDDQTFEFI--S 444
            +R + + +              +++  +EES    F+          L+  +T+E +  +
Sbjct: 1052 NRVYCLITQTEEPMTKFYRFNGEDKELSEESRGERFIYPIGSQFDMVLISPETWEIVPDA 1111

Query: 445  TYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEENEPTKGRILVF-----IV 494
            +   + +E+     I+  S+    +    Y C+GT +    E+  ++G I ++     + 
Sbjct: 1112 SIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SEDITSRGNIHIYDIIEVVP 1170

Query: 495  EDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC 548
            E GK      L+ + +KE KG V +++   G L+  + QKI  Y W LRD    +L    
Sbjct: 1171 EPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI--YIWQLRDG---DLIGVA 1225

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
                +I    + T    I + D+ KSISLL ++ E   +   +RD+N   +  +E + D+
Sbjct: 1226 FIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIEFMVDN 1285

Query: 609  IYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-FR----HGSLV 658
              LG     AE+N  ++  +  +  +   ++  L    +YHLG+ VN  FR       L 
Sbjct: 1286 TNLGFLVTDAESNLIVYMYQPEARESLGGQK--LLRKADYHLGQVVNTMFRVQCHQRGLH 1343

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
             R P     +   V++GT++G +G    LP + Y     LQ  L      + GLN +++R
Sbjct: 1344 QRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQNVLLSYQDHLCGLNPKEYR 1402

Query: 719  SFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            +  + K+     ++  +DGDLI S+  L+ +  +E++K +    EE+   + E+ RL
Sbjct: 1403 TLKSSKRLGINPSRCIIDGDLIWSYRLLANSERNEVAKKIGTRTEEILADLLEIERL 1459



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 490 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAESLQDVKIELVAATGHSKNGALSVFV 549

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL+G   +W++      ++S  D  D F+++S  + T  L +    E+ 
Sbjct: 550 NCINPQIITSFELEGCLDVWTVFDDATKKTSRQDQHD-FMLLSQKNST--LVLQTGQEIN 606

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +   N+ +VQVT+  VRL+  T
Sbjct: 607 EIENTGFTVNQATIFVGNLGQNRFIVQVTTRHVRLLQGT 645


>gi|296227035|ref|XP_002807684.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Callithrix jacchus]
          Length = 1394

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 196/474 (41%), Gaps = 62/474 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 923  VDSFAPFHNINCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 982

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 983  KVYAVATSTNTPCTRIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1042

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVFIVED---- 496
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+  V +    
Sbjct: 1043 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVTE 1101

Query: 497  -------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
                    K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1102 PRQTLTXXKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1156

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1157 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1216

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF-----RHGSLVMRL 661
             LG   ++ + NL       E        RL    ++H+G  VN F     R  +  +  
Sbjct: 1217 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1276

Query: 662  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
                        F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1277 KSVMWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1336

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1337 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1390



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 416 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 475

Query: 77  QASVELQGIKGMWSL-------------------RSSTDDPFDT-----FLVVSFISETR 112
             + EL G   MW++                     ST +  D      FL++S    T 
Sbjct: 476 VTTFELPGCYDMWTVIAPVRKEEEENPKGEGTEQEPSTPEADDDSRRHGFLILSREDSTM 535

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 536 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 580


>gi|195122290|ref|XP_002005645.1| GI18959 [Drosophila mojavensis]
 gi|193910713|gb|EDW09580.1| GI18959 [Drosophila mojavensis]
          Length = 1431

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLK-------------NQSCAEESE---------- 428
            +R +PL   PR++ +  ++R + + + K             ++  +EES           
Sbjct: 1002 VRKVPLRCTPRQLVYHRENRVYCLITQKEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1061

Query: 429  MHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEE 481
            +  + L+  +T+E +  ++   + +E+  +      S +        Y C+GT +    E
Sbjct: 1062 LFEMVLISPETWEIVPDASIQFEPWEHVTAFKLVKLSYEGTRSGLKEYLCIGTNFNY-SE 1120

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1121 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVVGFLVTGLGQKI- 1179

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1180 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1235

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1236 SRDFNPLEVFGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYHL 1293

Query: 646  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   VI+GT++G +G    LP + Y     LQ 
Sbjct: 1294 GQVVNTMFRVQCHQRGLHQRQPFLYENK-HFVIYGTLDGALGYCLPLPEKVYRRFLMLQN 1352

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L      + GLN +++R+    KK     ++  +DGDLI S+  L+ +   E++K +  
Sbjct: 1353 VLLSYQDHLCGLNPKEYRTIKTVKKMGINPSRCIIDGDLIWSYRMLAHSERSEVAKKIGT 1412

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ RL
Sbjct: 1413 RTEEILADLLEIERL 1427


>gi|49619065|gb|AAT68117.1| cleavage and polyadenylation specific factor 1 [Danio rerio]
          Length = 1105

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 205/475 (43%), Gaps = 64/475 (13%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 634  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 693

Query: 411  RTFAICSLKNQSC-------AEESEMHFV----------------RLLDDQTFEFISTYP 447
            + +A+C+   + C        EE E   +                +L+   ++E I    
Sbjct: 694  KVYAVCTSVKEPCTRIPRMTGEEKEFETIERDERYIHPQQDKFSIQLISPVSWEAIPNTR 753

Query: 448  LD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
            +D   +E+   + + +      V     Y  +GT  +  EE    +GRIL+      + E
Sbjct: 754  VDLEEWEHVTCMKTVALKSQETVSGLKGYVALGTCLMQGEEVT-CRGRILILDVIEVVPE 812

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD-DGTRELQSEC 548
             G      K +++ EKE KG V +L   +G L++AI QKI L+     D  G   + ++ 
Sbjct: 813  PGQPLTKNKFKVLYEKEQKGPVTALCHCSGFLVSAIGQKIFLWSLKYNDLTGMAFIDTQL 872

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
                +I  +Y  +  +FI+  D+MKSISLL Y+ E   +   +RD     + ++E + D+
Sbjct: 873  ----YIHQMY--SIKNFILAADVMKSISLLRYQPESKTLSLVSRDAKPLEVYSIEFMVDN 926

Query: 609  IYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
              LG   ++ + NL       E        RL    ++++G  VN F        L  ++
Sbjct: 927  NQLGFLVSDRDKNLMVYMYLPEAKESFGGMRLLRRADFNVGSHVNAFWRMPCRGTLDTAN 986

Query: 666  VGQIP-----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
               +         F T++G +G++  +  + Y  L  LQ  L  ++    GLN + +R  
Sbjct: 987  KKALTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPKAFRML 1046

Query: 721  NNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            + +++T+    KN LDG+L+  +L LS     E++K +  + + +   + E+ R+
Sbjct: 1047 HCDRRTLQNAVKNILDGELLNKYLYLSTMERSELAKKIGTTPDIILDDLLEIERV 1101


>gi|194756960|ref|XP_001960738.1| GF11349 [Drosophila ananassae]
 gi|190622036|gb|EDV37560.1| GF11349 [Drosophila ananassae]
          Length = 1455

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 199/435 (45%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            IR +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 IRKVPLRCTPRQLVYHRENRVYCLITQNEEPMTKFYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 646  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKLYRRFLMLQN 1376

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L    + + GLN +++R+    KK     ++  +DGDLI S+  L+ +  +E++K +  
Sbjct: 1377 VLLSYQEHLCGLNPKEYRTIKAVKKQGINPSRCIIDGDLIWSYRLLANSERNEVAKKIGT 1436

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ RL
Sbjct: 1437 RTEEILSDLLEIERL 1451



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLNDLKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      ++S  D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|358372791|dbj|GAA89393.1| cleavage and polyadenylation specificity factor subunit A
            [Aspergillus kawachii IFO 4308]
          Length = 1372

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 179/429 (41%), Gaps = 52/429 (12%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 432
            ++ + LGE    + +   S  + +  C   +    ++ E+H                 F+
Sbjct: 940  LKKVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPDDDELHPEWRNEAISFFPSARGSFI 999

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +L+   T+  I +Y L T EY  +I + S     N +       VGTA+    E+ P++G
Sbjct: 1000 KLVSPNTWSIIDSYSLGTDEYVMAIKNISLEISENTHERKDLIVVGTAFAR-GEDIPSRG 1058

Query: 488  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1059 CIYVFEVVQVVPDPDDPETDRKLKLIGKESVKGAVTALSEIGGQGFVLVAQGQKCMVRGL 1118

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  +         ++GD +K I    Y  E   +   A+D + 
Sbjct: 1119 KEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGIWFAGYSEEPYKMSLFAKDLDY 1178

Query: 597  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF- 652
              +SA E L D   L    A+++ N+  ++ + E        +L    ++H G F +   
Sbjct: 1179 LEVSAAEFLPDGRRLFIVVADSDCNIHVLQYDPEDPKSSNGDKLLSRSKFHTGNFASTLT 1238

Query: 653  -------RHGSLVMRLPDSDV---GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
                       ++    D D+     +  V+  T NG +G+I  +P E Y  L  LQ+ L
Sbjct: 1239 LLPRTMVSSEKMISNSDDMDIDNQSALHQVLMTTQNGSLGLITCMPEESYRRLSALQSQL 1298

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +     E
Sbjct: 1299 TNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAREWE 1356

Query: 763  LCKRVEELT 771
            +   +E ++
Sbjct: 1357 IKADLEAIS 1365


>gi|342181720|emb|CCC91200.1| putative damage-specific DNA binding protein [Trypanosoma congolense
            IL3000]
          Length = 1274

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 179/826 (21%), Positives = 324/826 (39%), Gaps = 131/826 (15%)

Query: 33   NLGPIVDFCV-VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV-ELQGIKGMWS 90
            N GP+ D  V +D  R G   V   +G   +G L  VR  + ++    + + Q ++ +  
Sbjct: 426  NCGPVFDITVALDGPRTG---VFAGTGVDHNGGLSFVRAAVSVSRDVCISDFQDVRCVCV 482

Query: 91   LRSSTDDPFDTFLVVSFISETRILAMNLEDE--LEETEIEGFCSQTQTLF-CHDAIYNQL 147
               S D      ++ SF   +RI    + +   LEE     F +  +TL   +   +   
Sbjct: 483  ---SHD-----IIIFSFPGYSRICRYCVGETTVLEELISSTFDTSRETLLLTYSDEHEAF 534

Query: 148  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILT 207
            +QVT+  VR+V         E     G  +  A AN   ++ +         E+    + 
Sbjct: 535  LQVTTAGVRIVKPEEGSYLFECA---GNGIEHAHANEGLIVFSNPA------ELNAFSVR 585

Query: 208  EVKH-AQLE--YEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG 264
            E  H A L   +E SCL +       S+      G W   +V +++L D  +  K     
Sbjct: 586  EAAHIANLHQVHETSCLWVL---SGSSF----LTGEWGTCAVNLYALVDRAVQHKACFNC 638

Query: 265  EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSK 324
               P S+ + A    + LL  L +G++++  ++ + G  T   +  +  QP+ L    S 
Sbjct: 639  SATPCSMCVVARPEGNRLLVGLLNGYVVDVPVD-EVGSSTTVTETVVTMQPVRLFNLESH 697

Query: 325  NTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVS--HMCPFNSAAFPDSLAIAKEGELTIG 382
            N   V    + P ++  +  +   + V+L +V+   + P  ++     L    E  L  G
Sbjct: 698  NA--VLCLGEVPLILIVTETRFQLTGVDLNDVALGAVIPNPNSPLRYILFSKTERALIFG 755

Query: 383  TIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLKNQSCAEESEMH- 430
             I ++QKL+I  I L     R+     S  F +              K ++   +S +  
Sbjct: 756  NISNVQKLNIDFIGLKATVTRLKFMPWSGIFVVSIRRTDKDQLLAVTKQETLCPDSLLEN 815

Query: 431  --FVRLLDDQTFEFI-STYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG 487
               + LL+++   FI ST    + E+     SC  + + +    +GT +V P E      
Sbjct: 816  PTSLELLENERCVFIESTVLGGSNEWS----SCGDAGNKDSVVLIGTTFVFPHEQLSRSS 871

Query: 488  RILVFIVEDG-------KLQLIAEKETKGAVY---SLNAFNGKLLAAINQKIQLYKWMLR 537
            R     VE G        L+L    + +GA+    S+  + G++   I+  + L+ W   
Sbjct: 872  RFTWCTVEAGGVAPERATLRLQGRTDVEGALQCCCSVPNYAGRIALGISGCVALFSWNPA 931

Query: 538  DDGTRELQSECGHHGHILALYVQT-RGD--FIVVGDLMKSISLLIYKHEEGAIEERARDY 594
            D  +  +  E    G I+   V T +GD  +IV  D+  S   +     +G++   ARD 
Sbjct: 932  D--STFVPEETIRVGTIVTRIVPTVQGDTSYIVACDVRHSCFFIRVDTIQGSLSIAARDP 989

Query: 595  NANWM---SAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERG-------RLEVVGEYH 644
                +   + ++         A++ FN F+V   +      E         RL    +YH
Sbjct: 990  ELRGVMDGTVIQYPSHHDTCFADDCFNFFSVSHTTPSTDSSEPPPSTITTQRLRTTAQYH 1049

Query: 645  LGEFVNRFRHGSLV--------MRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLF 694
            +G+ +   + GS          + +P + V  +  P + +GT +G  G I  + +E +L 
Sbjct: 1050 IGDLITAMQQGSFAPCSVINDFVPVPMALVPGVCGPQIAYGTSHGAFGTITPVTNETFLL 1109

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWR---------------SF-----------NNEKKTVD 728
            L+ ++ ++  V+  +GG  H  +R               SF           N  ++   
Sbjct: 1110 LKSIEISVAAVLPPLGGFCHSSYREVLCAGQERGMSRNTSFEVLNPKAAEVMNRRRQKYL 1169

Query: 729  AKNFLDGDLIESFLDLS--------RTRMDEI---SKTMNVSVEEL 763
             K    GD++E FL +S        +   D+I   S + N S+EE 
Sbjct: 1170 PKCVCSGDVVEMFLRMSDSEKRSTIKLASDQIVRWSPSSNTSLEEF 1215


>gi|332018184|gb|EGI58789.1| Cleavage and polyadenylation specificity factor subunit 1 [Acromyrmex
            echinatior]
          Length = 1412

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 223/517 (43%), Gaps = 85/517 (16%)

Query: 313  TQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPD 369
            T+   +R FS+      VF  SD P  I+ + +  L ++    +  V+   PFN+   P 
Sbjct: 897  TRICVMRYFSNIAGYNGVFICSDYPHWIFLTGRGELRTHPMGIDGPVTSFAPFNNINCPQ 956

Query: 370  S-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA 424
              L   ++ EL I  +           +R +PL   P  + +  +S+T+ + +    S A
Sbjct: 957  GFLYFNRKEELRICVLPTHLSYDAPWPVRKVPLRCTPHFVTYHLESKTYCVIT----STA 1012

Query: 425  EESE------------------MHFVRLLDDQTFEFIS--TYP-----LDTFEYGCSILS 459
            E  +                    F R+  +  F  +S  T P     LD +E+   + +
Sbjct: 1013 EPLKSYYRFNGEDKVLTKLYYLFQFSRIFMNLLFSPVSWETIPNTKIELDQWEHVTCLKN 1072

Query: 460  CSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIA 503
             S + +        Y  +GT Y   E+   ++GRIL+F     + E G      + + I 
Sbjct: 1073 VSLAYEGTRSGLKGYIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIY 1131

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQ 560
             KE KG + ++   +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++   
Sbjct: 1132 AKEQKGPITAITQVSGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI--- 1185

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AEN 615
                 I++ D+ KSISLL ++ E   +   +RD+    +  +E L D+  LG      E+
Sbjct: 1186 --KSLILIADVYKSISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNSNLGFIVADGES 1243

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP----- 670
            N  LF  +  S  +   +  +L    ++HLG+ +N F      +  P +D  Q       
Sbjct: 1244 NLALFMYQPESRESLGGQ--KLIRKADFHLGQKINTFFRIKCRITDPANDKKQFSGADKR 1301

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV-- 727
               ++ +++G +G I  +P + Y  L  LQ  L   I  + GLN + +R  +  K  V  
Sbjct: 1302 HVTMYASLDGSLGYILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKAYR--HTYKSYVRN 1359

Query: 728  ---DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
                A+  +DGDL+  +L L      +++K +   V+
Sbjct: 1360 QGNPARGIIDGDLVWRYLFLPNNEKADLAKKIGTRVQ 1396



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 23  SYV-EVLERYVNLGPIVDFCVVD--------LERQGQG-QVVTCSGAYKDGSLRIVRNGI 72
           SY+ EV +  +N+GP  +  + +        L+ Q    ++VT SG  K+G+L +++  I
Sbjct: 467 SYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLQNQDPDVELVTTSGYGKNGALCVLQRSI 526

Query: 73  GINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMNLEDELEET 125
                 + +L G + MW++          T++    FL++S   E   + +    E+ E 
Sbjct: 527 RPQVVTTFQLPGCEDMWTVIGIVNNDEIRTEEGSHAFLILS--QEDSTMVLQTGQEINEV 584

Query: 126 EIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 585 DQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 618


>gi|68476233|ref|XP_717766.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|68476422|ref|XP_717672.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|74586274|sp|Q5A7S5.1|RSE1_CANAL RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|46439394|gb|EAK98712.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
 gi|46439495|gb|EAK98812.1| potential spliceosomal U2 snRNP complex SF3b component [Candida
            albicans SC5314]
          Length = 1219

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 161/755 (21%), Positives = 313/755 (41%), Gaps = 98/755 (12%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +++ + S +   D +LV+S    ++ L +++ + +E+ E   F     T+         +
Sbjct: 485  IFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASV 544

Query: 148  VQVTSGSVRLVSSTSRELRN-EWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGIL 206
            VQ+ S  ++ V + +   +  +W  P G ++  AT N  QVL+A     +VY EI D   
Sbjct: 545  VQIYSNGIKHVRTVNGNKKTTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEI-DATD 603

Query: 207  TEVKHAQLEYEI-SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL--- 262
             ++   Q   EI + +    I EN S     A+   +D ++++ SL + N +  + L   
Sbjct: 604  DQLIEYQDRLEIATTITAMAIQENISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQAL 663

Query: 263  -GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTF 321
                   + +     E  +++   + +G      ++   G L++ +   +G++P++L   
Sbjct: 664  SANSSSLKMLKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLSVI 721

Query: 322  SSKNTTH-VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFP-DSLAIAKEGEL 379
               N    + A S  P + Y        + +   ++++   F S     + +   K+  L
Sbjct: 722  KFSNEIEGILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDNNL 781

Query: 380  TIGTI-------DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLKNQ 421
             I ++       D  Q L I +  L   PR++     +R F             C++   
Sbjct: 782  IIFSVGKEDSVFDPSQDLTIATTKLRYTPRKMI-TNGNRLFISESEYNVQGPFKCNINGD 840

Query: 422  SCAEESEMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS 466
                  E ++               ++++D ++ + I +  LD  E   S+ + SF+  S
Sbjct: 841  VKENVDEDYYEAFGYEWKQNSWASCIQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNKTS 900

Query: 467  N-----VYYCVGTAY---VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN 518
                   +  VG      +LP  N   K  +  F +    LQL+ + E       L  F 
Sbjct: 901  TPSVPASHLVVGVCTNQTILP--NSYDKSYLYTFKIGKKHLQLVHKTELDHIPQVLENFQ 958

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSEC----GHHGHILALYVQTRGDFIVVGDLMKS 574
             KLL A    I+LY     D G ++L  +         +I  +  QT  + I++ D  KS
Sbjct: 959  DKLLVASGNHIRLY-----DIGQKQLLKKSTTIIDFSTNINKIIPQT--NRIIICDSHKS 1011

Query: 575  ISLLIYKHEEGAIE--ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--------- 623
             S++  K +E   +    A D     ++++  LD D  +G +   N+F  R         
Sbjct: 1012 -SIVFAKFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISKQA 1070

Query: 624  -------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGT 676
                   K  +G  +    +L+ + E+H+G+ +  F  G L       ++    +VI+  
Sbjct: 1071 DDDWTILKTQDGILNSCPYKLQNLIEFHIGDIITSFNLGCL-------NLAGTESVIYTG 1123

Query: 677  VNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDG 735
            + G IG++  L  +  +  L  LQ  +++    + G +H + RS+ N       KN +DG
Sbjct: 1124 LQGTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYNP-----IKNVIDG 1178

Query: 736  DLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            DL+E FL+   +   EIS+ +N SV ++ K++ +L
Sbjct: 1179 DLLERFLEFDISLKIEISRKLNKSVNDIEKKLIDL 1213


>gi|157141630|ref|XP_001647735.1| spliceosomal protein sap [Aedes aegypti]
 gi|108867854|gb|EAT32403.1| AAEL015441-PA, partial [Aedes aegypti]
          Length = 645

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 128/649 (19%), Positives = 253/649 (38%), Gaps = 112/649 (17%)

Query: 213 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSV- 271
           ++  ++ C+ +  +      S   AVG+  D +VR+ SL   + ++   +  + +P +  
Sbjct: 12  KMPSDVMCMALGSVPAGEQRSWFLAVGL-ADNTVRVISLDPSDCLSPRSM--QALPSAAE 68

Query: 272 LLCAFE---------------GISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPI 316
            LC  E               G  YL   L +G LL  +L+  +G+L D +   LG++P+
Sbjct: 69  SLCIVEMGTGDTNEEGVASSAGCIYLNIGLTNGVLLRTVLDPVSGDLADTRTRYLGSRPV 128

Query: 317 TLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
            L     + +  V A S R  + Y    +   + ++ + + +   F+S    + +     
Sbjct: 129 KLFRIKMQGSEAVLAMSSRTWLSYYFQNRFHLTPLSYETLEYASGFSSEQCSEGIVAIST 188

Query: 377 GELTIGTIDDIQKLHIR-SIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLL 435
             L I  ++ +  +  + + PL   P+R     ++    I    + +  EE++    + +
Sbjct: 189 NTLRILALEKLGAVFNQITFPLEYTPKRFLIHNETGKLVISETDHNAYTEETKNIRKKQM 248

Query: 436 DDQTFE----------------FIS-TYPLDTF--------------------------- 451
            D+  E                FI+   P D F                           
Sbjct: 249 ADEMKEAAGEDEQELANEMADAFINEVLPEDVFSAPKAGTGMWASQIRVMDPINGHTYSK 308

Query: 452 ------EYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG---RILVFIVEDGKLQLI 502
                 E   S+    F+ D   Y   G A  L    +   G    +  + V   +L+  
Sbjct: 309 VQLAQNEAVLSMALVRFAVDQKWYVVAGVAKDLQMNPKIANGGFIDVYKYDVHTHQLEHY 368

Query: 503 AEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI--LALYVQ 560
              E   A  ++  F G++L  + + +++Y     D G ++L  +C  + HI    + +Q
Sbjct: 369 HRTEIDDAPGAIAGFQGRVLVGVGRVLRIY-----DLGKKKLLRKC-ENKHIPNQIVNIQ 422

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
             G  + V D+ +SI  + YK  E  +   A D +  W++   +LD D    A+   N+ 
Sbjct: 423 AMGSRVFVSDVQESIYCIKYKRAENQLIIFADDTHPRWITTSTLLDYDTVATADKFGNIA 482

Query: 621 TVRKNSEGATD-----------EERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            +R     + D            +RG L       E +  +HLGE +   +  +L+    
Sbjct: 483 ILRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENICTFHLGETIMSLQKATLI---- 538

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++I+ T++G +G +      E Y F + L+ ++R     + G +H  +RS+ 
Sbjct: 539 ---PGGSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENTPLCGRDHLSYRSY- 594

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   K+ +DGDL E F  +   +   I+  +  +  E+ K++E++
Sbjct: 595 ----YYPVKHVMDGDLCEQFTSMDPAKQKSIASDLGRTPNEVAKKLEDI 639


>gi|156086042|ref|XP_001610430.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797683|gb|EDO06862.1| conserved hypothetical protein [Babesia bovis]
          Length = 1450

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 195/942 (20%), Positives = 335/942 (35%), Gaps = 214/942 (22%)

Query: 30   RYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMW 89
            +  NLGPIVDF        G   ++ C G   +G +  + NG+ I+  AS    G+    
Sbjct: 523  KQTNLGPIVDFTFGPQSDSGAIPILACCGYGAEGRVCSITNGVAIDVMASSPASGVLYTT 582

Query: 90   SLRSSTDDPFDTFLVVSFISETR----ILAMNLEDELEETEIE----------------- 128
            +L    +   +  +  S+ + TR    ++    + +  +T I+                 
Sbjct: 583  ALPLFNEANNNFMICTSYFNRTRFYKVVVPPAPKRDPSKTAIDFVKQPLWVVTSMDPSSH 642

Query: 129  GFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR------NEWKSPPGYSVNVATA 182
             F    +TL         ++QVT+  + LV+  S  +       N+     G +V     
Sbjct: 643  RFVEHMRTLLMVPYGTQMVLQVTTNGISLVNYKSVAIPRVDHSLNDICKIAGIAVGSGVM 702

Query: 183  NAS---------QVLLATGGGHLVYLEIGDGILTEVKHAQ-LEYEISCLDINPIGE--NP 230
              S          V +       + L++ +G+  ++ H   L  ++S       G+    
Sbjct: 703  PISIVSCHLCDSGVFIGLSNHVFLILDVSNGV--KILHKSVLPKQVSSTAYLSGGDFKTK 760

Query: 231  SYSQIAAVGMWTDISVRIFSLPDLNLI--TKEHLGGEIIPRSVLLCAFEGISYLLCALGD 288
              + + AV  W D  + + S   L ++  TK   G  +  R+V       ++ +  AL D
Sbjct: 761  RRTGLIAVSTWEDTEISLISPEGLQMLHTTKVPCGYGVAIRAVRFGVVGDVALVFAALSD 820

Query: 289  GHLLNFLLNM----KTGELTDRK---------KVSLGTQPITLRTFSSKNTT-------- 327
            G L  + L      K G  T+ +         KVS G  PI L   S   +         
Sbjct: 821  GTLCVYRLKFGDCDKDGLGTNTQLSMVMENVIKVSNG--PIGLDAISMHASVPGSGGTNL 878

Query: 328  ---HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSA-AFPD--SLAIAKEGELTI 381
                +    D P +IY++  KL Y  VN+  +  +  FN     P   SL    +  + I
Sbjct: 879  LKNRIVTTGDNPMLIYANRGKLEYVPVNVPRIDTVTSFNFVEKNPQGVSLVFTDKKSIHI 938

Query: 382  GTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAIC-----------SLKNQSCAEESEM 429
            G +D   +LH+ +I  G     IC H E       C           S+ + S       
Sbjct: 939  GHMDTALQLHVETICSGRSFETICYHDESDLVVVGCNGELIADCDMPSISDSSVTHNDSS 998

Query: 430  HF--------------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 469
             F                    V+ +   T E + T  +       S+ +  F D     
Sbjct: 999  VFRCMDVASCGTIPGVYVLKSCVKFIHLGTKEVVHTLNMPQRHVITSMCTVKF-DGPKTL 1057

Query: 470  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFN----------- 518
              +G++ +  ++  P++G I  F+V+     +I     K  V  L   N           
Sbjct: 1058 IALGSSLIQDKDGVPSQGYI--FLVD-----VIKSDAHKWNVVFLRTLNFIDKGVTQMTP 1110

Query: 519  --GKLLAAINQKIQLYKWMLRDD----------------------GTRELQSECGHHGHI 554
               +L+ A+N+ + +   +   D                      G   L +   +    
Sbjct: 1111 CINQLVVALNETVAVLSLVRGADPEPSDTLRSYKMEVLHESDESYGQYTLVTRAEYKSCS 1170

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
              + +    D IV+GDLM S+ +L ++  E  + E  +D+N+ + +A   +D    + A+
Sbjct: 1171 YVVSLDAYQDVIVIGDLMNSMRMLQWQGTE--LREVCKDFNSVYCTAAAAIDQTSCVVAD 1228

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHG-------SLVMRLPDSDVG 667
            ++ N +   K      D E  + E VG +H GE +NR R         +L+    D D+ 
Sbjct: 1229 SSGNFYVFAKRQVVTNDAEAIKAEDVGLFHHGELINRIRRNPKVQSRVALLNGNSDHDMP 1288

Query: 668  QIPTVI-----FGTVNGVIGVIASLPHE----------------QYLF------------ 694
            + P        F  V G   V A++ H                 +Y F            
Sbjct: 1289 EFPMKTYCNRPFCCVQG--DVSAAISHSSCNDLVRGLAKPNKFWKYGFKTILTCVTTSGS 1346

Query: 695  ---------------LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
                           L  ++  + ++    G +++E WRSF N      AK F+DGD IE
Sbjct: 1347 LLQLCIFDDTKLFCRLAFVEEGINRIQPQAGNISNEHWRSFKNRWMMCAAKGFIDGDAIE 1406

Query: 740  SFLDLSRTRMDE----ISKT----MNVSVEELCKRVEELTRL 773
            S+  L  +   E    +SKT    +  S E L   VE + RL
Sbjct: 1407 SYNRLDTSLKSEVYNMVSKTDAHGLFYSPELLSLEVEHIQRL 1448


>gi|71407487|ref|XP_806209.1| damage-specific DNA binding protein [Trypanosoma cruzi strain CL
           Brener]
 gi|70869885|gb|EAN84358.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 508

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 62/340 (18%)

Query: 473 GTAYVLPEENEPTKGRILVFIVEDGKL-------QLIAEKETKGAVYS---LNAFNGKLL 522
           GT +  P+E  P   R + + VE GKL       + I  K+ +GA+     +  + G++ 
Sbjct: 92  GTTFAFPDEQLPRSSRFIWYCVEQGKLISERPQLRQIGSKDVEGALQCCCIVPNYVGRIA 151

Query: 523 AAINQKIQLYKWMLRDDGTRELQSECGHH--GHILALYVQTRGDFIVVGDLMKSISLLIY 580
             IN  I LY W   D      ++ C       +L ++ Q    ++V  D   S   +  
Sbjct: 152 LGINGCIALYSWNAADSVFVAEETICIGTIVTRVLPIF-QGDASYMVAFDARHSCFFIQV 210

Query: 581 KHEEGAIEERARDYNANW-MSAVEILDDDIY--LGAENNFNLFTVRK---------NSEG 628
              +G++E  ARD      M        +IY     ++ +N F + +         N+  
Sbjct: 211 DTIQGSLEIVARDSEPRGVMDGAVFQLGNIYNICFGDDYYNFFCLSRGASTLPSVSNATS 270

Query: 629 ATDEERGRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI--PTVIFGTVN 678
           AT    G+LE   +YHLG+ V   + GS        + + +P + +  I  P V+FGT +
Sbjct: 271 ATVSS-GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGICGPQVVFGTSH 329

Query: 679 GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS------------------- 719
           G  G I  + +E YLFL+ L+  +  V+  +GG  H  +R                    
Sbjct: 330 GAFGTITPVSNETYLFLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENA 389

Query: 720 -------FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
                  F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 390 NVVSSGVFDKHRKRYLSRCVCSGDLIESFLTFSQTIQQRI 429


>gi|351713968|gb|EHB16887.1| Cleavage and polyadenylation specificity factor subunit 1
            [Heterocephalus glaber]
          Length = 1440

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 192/466 (41%), Gaps = 74/466 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 969  IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1028

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  +  C                         + E   ++L+   ++E I  + 
Sbjct: 1029 KVYAVATSTSTPCTRIPRMTGEEKEFEAIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1088

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRI-----LVFIVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GR+     +  + E
Sbjct: 1089 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRVRDWERIEVVPE 1147

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1148 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1202

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1203 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1262

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1263 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1316

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  +  + Y  L  LQ  L  ++    GLN  
Sbjct: 1317 SEGPSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPR 1376

Query: 716  QWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
             +R  + +++ +    +N LDG+L+  +L LS     E++K +  +
Sbjct: 1377 AFRMLHVDRRILQNAVRNVLDGELLNRYLYLSTMERGELAKKIGTT 1422



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 522

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                         +  D     FL++S    T 
Sbjct: 523 VTTFELPGCYDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAQDDGRRHGFLILSREDSTM 582

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSR 163
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+   ++
Sbjct: 583 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQ 632


>gi|356530945|ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 38/309 (12%)

Query: 444  STYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFI---VED 496
            +T P+ + E   ++    L  + S ++     +GTAYV   E+   +GRIL+F    + D
Sbjct: 1100 ATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYV-QGEDVAARGRILLFSLGKITD 1158

Query: 497  GKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG- 552
                L++E   KE KGA+ +L +  G LL A   KI L+KW    +GT EL         
Sbjct: 1159 NPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKW----NGT-ELNGIAFFDAP 1213

Query: 553  --HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
              H+++L +    +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1214 PLHVVSLNIVK--NFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGST 1271

Query: 611  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF----------RHGSL 657
            L    +++N N+       + +   +  +L    E+H+G  V +F          R GS+
Sbjct: 1272 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGSV 1331

Query: 658  VMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                P SD      ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +
Sbjct: 1332 ----PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAF 1387

Query: 718  RSFNNEKKT 726
            R F +  K 
Sbjct: 1388 RLFRSNGKA 1396



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 27/136 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  +N+GP+ DF              + +Q   ++V CSG  K+GSL ++R  I    
Sbjct: 502 VRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEV 561

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               +  DD +  +L++S   E R + +   D L
Sbjct: 562 ITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISL--EARTMVLETADLL 619

Query: 123 EE-TEIEGFCSQTQTL 137
            E TE   +  Q +TL
Sbjct: 620 SEVTESVDYYVQGKTL 635


>gi|66812672|ref|XP_640515.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
 gi|60468551|gb|EAL66554.1| CPSF domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1628

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 211/467 (45%), Gaps = 77/467 (16%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGEL----TIGTIDDIQK-LHIRSIPLGEHPRRICHQEQ 409
            V     FN+ +  D  +  +KE ++    T+ T+ + +  + IR IP      +I +  +
Sbjct: 1180 VETFTSFNNISCQDGFIYFSKEKDVIKICTLSTLMNFENDIAIRRIPTKNSCHKIAYHSE 1239

Query: 410  SRTFA-ICSLKN--QSCAEESEMHF-------VRLLD---DQTFEFISTYPLDTFE--YG 454
            ++ +  I S     Q   E+S+          ++L+D   D  ++FI ++ L   E    
Sbjct: 1240 AKCYVVIVSFPQVTQELQEDSKKPILTDDKFQIKLIDPTIDWNWKFIDSFSLQDRETVLA 1299

Query: 455  CSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-IVE-----------DG 497
              I+S  F++   +     +  +GTA+   E+ +  KGR+LVF IV            + 
Sbjct: 1300 MKIVSLKFTEPDGITRARPFLVIGTAFTFGEDTQ-CKGRVLVFEIVSHKTQFESEELGEK 1358

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            +L L+ EKE KG V +L++ NG LL  I  K+ + ++      T  L +   +   I   
Sbjct: 1359 RLNLLYEKEQKGPVTALSSVNGLLLMTIGPKLTVNQFY-----TGSLVTLSFYDAQIYIC 1413

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA---- 613
             + T  ++IV+GD+ KS+  L +K +   +   ++DY A  + + E + +   L      
Sbjct: 1414 SICTIKNYIVIGDMYKSVYFLQWK-DNKTLNLLSKDYQALNIFSTEFIVNQKTLSILVSD 1472

Query: 614  -ENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 672
             + N  LF+       +   +  + E+ G        N+  +     RLP  +      V
Sbjct: 1473 LDKNILLFSFEPQDPSSRSGQINQ-EINGN-------NKNDN-----RLPKKE----QLV 1515

Query: 673  IFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD---- 728
            IFGT++G + V+  L  + YL    +Q+ L   +    GLN +Q+RSF +  +       
Sbjct: 1516 IFGTLDGGLNVLRPLDEKIYLLFYHIQSKLY-YLPQTAGLNPKQYRSFKSFSQNFHFSPS 1574

Query: 729  -----AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                  K  LDGDLI  FL LS++    IS ++N + +E+ + ++++
Sbjct: 1575 TFHQLPKFILDGDLISKFLSLSQSEKRLISNSINSTSDEIIESLKDV 1621


>gi|224120960|ref|XP_002318462.1| predicted protein [Populus trichocarpa]
 gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa]
          Length = 1455

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 170/370 (45%), Gaps = 41/370 (11%)

Query: 432  VRLLD--DQTFEFISTYPLDTFEYGCSILSCSF----SDDSNVYYCVGTAYVLPEENEPT 485
            VR+L+  +  ++  +T P+ T E   ++   S     + ++     VGTAYV   E+   
Sbjct: 1091 VRILEPSNGPWQVKATIPMQTSENALTVRMVSLFNTSTKENETLLAVGTAYV-QGEDVAA 1149

Query: 486  KGRILVFIV----EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            +GRIL+F V    E+ ++ L++E   KE KGA+ +L +  G LL A   KI L+KW    
Sbjct: 1150 RGRILLFSVVKNPENSQI-LVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWT--- 1205

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
             GT            +  + +    +FI++GD+ KSI  L +K +   +   A+D+ +  
Sbjct: 1206 -GTELTGVAFSDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFASLD 1264

Query: 599  MSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
              + E L D   L       + N  +F    K SE    +   +L    E+H+G  V +F
Sbjct: 1265 CFSTEFLIDGSTLSLVVSDEQKNVQIFYYAPKMSESWKGQ---KLLSRAEFHVGALVTKF 1321

Query: 653  RHGSLVMRLPDSD-VGQIP--------TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
                L M  P  D  G  P         ++FGT++G IG IA L    +  L+ LQ  L 
Sbjct: 1322 MR--LQMLSPSLDRSGAAPVSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLV 1379

Query: 704  KVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
              +  V GLN + +R F ++ K      ++ +D +++  +  +      EI++ +  +  
Sbjct: 1380 DAVPHVAGLNPKSFRQFRSDGKAHRPGPESIVDCEMLSYYEMIPLEEQVEIAQQIGTTRA 1439

Query: 762  ELCKRVEELT 771
            ++   + +LT
Sbjct: 1440 QILSNLNDLT 1449



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 26/135 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  +N+GP+ DF              + +Q   ++V CSG  K+G+L +++  I    
Sbjct: 510 VRDSLINVGPLKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALCVLQQSIRPEM 569

Query: 77  QASVELQGIKGMW-------------SLRSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
              VEL G KG+W             SL+ ++DD +  +L++S   E R + +   D L 
Sbjct: 570 ITEVELPGCKGIWTVYHKNARIHSVDSLKMASDDEYHAYLIISM--EARTMVLETADHLT 627

Query: 124 E-TEIEGFCSQTQTL 137
           E TE   +  Q +T+
Sbjct: 628 EVTESVDYFVQGRTI 642


>gi|297820284|ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323863|gb|EFH54284.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 454

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 167/370 (45%), Gaps = 56/370 (15%)

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKGRIL 490
           +R+LD +T        L   E   S+ + +F D +      VGT   +  +  P K  + 
Sbjct: 103 IRILDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGM--QFWPKKNLVA 160

Query: 491 VFI-----VEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
            FI     VE+GK L+L+ + + +G   +L  F G+LLA I   ++LY     D G + L
Sbjct: 161 GFIHIYRFVEEGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLY-----DLGKKRL 215

Query: 545 QSECGHHGHI-LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 603
             +C +       + +QT  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 216 LRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASH 275

Query: 604 ILDDDIYLGAENNFNLFTVRKNSE-----------GATDEERGRL--------EVVGEYH 644
            +D D   GA+   N++ VR   +           G    E+G+L        E+V ++H
Sbjct: 276 HVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIV-QFH 334

Query: 645 LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI-ASLPHEQYLFLEKLQTNLR 703
           +G+ V   +  S++        G   ++++GTV G IG + A    +   F   L+ ++R
Sbjct: 335 VGDVVTCLQKASMI-------PGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMR 387

Query: 704 KVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF----LDLSRTRMDEISKTMNVS 759
           +    + G +H  +RS          K+ +DGDL E F    +DL R   DE+ +T    
Sbjct: 388 QEYPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRT---- 438

Query: 760 VEELCKRVEE 769
             E+ K++E+
Sbjct: 439 PAEILKKLED 448


>gi|195150431|ref|XP_002016158.1| GL10645 [Drosophila persimilis]
 gi|194110005|gb|EDW32048.1| GL10645 [Drosophila persimilis]
          Length = 1459

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 60/434 (13%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESEMHFVRLLDDQ 438
            +R +PL   PR++ +  ++R + + +              +++  +EES        +  
Sbjct: 1030 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPNGS 1089

Query: 439  TFEFISTYP------------LDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
             FE +   P             + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1090 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1148

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1149 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1207

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1208 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1263

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1264 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLIRKADYHL 1321

Query: 646  GEFVN-RFR---HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
            G+ VN  FR   H   V +           V++GT++G +G    LP + Y     LQ  
Sbjct: 1322 GQVVNTMFRVQCHQRGVHQRQPFLYENKHFVVYGTLDGGLGYCLPLPEKVYRRFLMLQNV 1381

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            L      + GLN +++R+  + KK     ++  +DGDLI S+  L  +  +E++K +   
Sbjct: 1382 LLSYQDHLCGLNPKEFRTLKSFKKQGLNPSRCIIDGDLIWSYRLLPNSDRNEVAKKIGTR 1441

Query: 760  VEELCKRVEELTRL 773
             EE+   + E+ RL
Sbjct: 1442 TEEILSDLLEIERL 1455



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 488 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFV 547

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      ++S  D  D F+++S  + T  L +    E+ 
Sbjct: 548 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQSNST--LVLQTGQEIN 604

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 605 EIENTGFTVNQATIFVGNLGQQRFIVQVTTRHVRLLQGT 643


>gi|198457226|ref|XP_001360595.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
 gi|198135905|gb|EAL25170.2| GA10080 [Drosophila pseudoobscura pseudoobscura]
          Length = 1459

 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 60/434 (13%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESEMHFVRLLDDQ 438
            +R +PL   PR++ +  ++R + + +              +++  +EES        +  
Sbjct: 1030 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPNGS 1089

Query: 439  TFEFISTYP------------LDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
             FE +   P             + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1090 QFEMVLISPETWEIVPDASIRFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1148

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      L+ + +KE KG V +++   G L+  + QKI 
Sbjct: 1149 DITSRGNIHIYDIIEVVPEPGKPMTKFKLKEVFKKEQKGPVSAISDVLGFLVTGLGQKI- 1207

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1208 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEHRTLSLA 1263

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   +  +L    +YHL
Sbjct: 1264 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQ--KLIRKADYHL 1321

Query: 646  GEFVNR-FR---HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
            G+ VN  FR   H   V +           V++GT++G +G    LP + Y     LQ  
Sbjct: 1322 GQVVNTMFRVQCHQRGVHQRQPFLYENKHFVVYGTLDGGLGYCLPLPEKVYRRFLMLQNV 1381

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            L      + GLN +++R+  + KK     ++  +DGDLI S+  L  +  +E++K +   
Sbjct: 1382 LLSYQDHLCGLNPKEFRTLKSFKKQGLNPSRCIIDGDLIWSYRLLPNSDRNEVAKKIGTR 1441

Query: 760  VEELCKRVEELTRL 773
             EE+   + E+ RL
Sbjct: 1442 TEEILSDLLEIERL 1455



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 488 EVCDSLINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFV 547

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      ++S  D  D F+++S  + T +L      E+ 
Sbjct: 548 NCINPQIITSFELDGCLDVWTVFDDATKKTSRHDQHD-FMLLSQSNSTLVLQTG--QEIN 604

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 605 EIENTGFTVNQATIFVGNLGQQRFIVQVTTRHVRLLQGT 643


>gi|356559917|ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 144/305 (47%), Gaps = 30/305 (9%)

Query: 444  STYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---ED 496
            +T P+ + E   ++    L  + S ++     +GTAYV   E+   +GRIL+F +    D
Sbjct: 1098 ATIPMQSSENALTVRMVTLVNTTSKENETLLAIGTAYV-QGEDVAARGRILLFSLGKNTD 1156

Query: 497  GKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG- 552
                L++E   KE KGA+ +L +  G LL A   KI L+KW    +GT EL         
Sbjct: 1157 NPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKW----NGT-ELNGIAFFDAP 1211

Query: 553  --HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
              H+++L +    +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1212 PLHVVSLNIVK--NFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGST 1269

Query: 611  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR------L 661
            L    +++N N+       + +   +  +L    E+H+G  V +F    ++        +
Sbjct: 1270 LSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRAGAV 1329

Query: 662  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
            P SD      ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +R F 
Sbjct: 1330 PGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFR 1389

Query: 722  NEKKT 726
            +  K 
Sbjct: 1390 SNGKA 1394



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 39/212 (18%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  +N+GP+ DF              + +Q   ++V CSG  K+GSL ++R  I    
Sbjct: 500 VRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEV 559

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               +  DD +  +L++S   E R + +   D L
Sbjct: 560 ITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHAYLIISL--EARTMVLETADLL 617

Query: 123 EE-TEIEGFCSQTQTLFCHD--------AIYNQLVQVTSGS--VRLVSSTSRELRNEWKS 171
            E TE   +  Q +TL   +         +Y +  ++  GS   + VS  +  L +   S
Sbjct: 618 SEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGARILDGSFMTQDVSFGASNLESGSAS 677

Query: 172 PPGYSVNVATANASQVLLATGGGHLVYLEIGD 203
               +++V+ A+   +L  + G   + L IGD
Sbjct: 678 DSAIALSVSIADPFVLLRMSDGS--IRLLIGD 707


>gi|449524573|ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like, partial [Cucumis sativus]
          Length = 741

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 32/276 (11%)

Query: 471 CVGTAYVLPEENEPTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAA 524
            VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A
Sbjct: 423 AVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIA 481

Query: 525 INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG---DFIVVGDLMKSISLLIYK 581
              KI L+KW        EL     +   +  LYV +     +FI++GD+ KSI  L +K
Sbjct: 482 SGPKIILHKWT-----GAELNGIAFYD--VPPLYVVSLNIVKNFILLGDIHKSIYFLSWK 534

Query: 582 HEEGAIEERARDYNANWMSAVEILDDDIYLGA-----ENNFNLFTVRKNSEGATDEERG- 635
            +   +   A+D+ +    A E L D   L       + N  +F     S   T+  +G 
Sbjct: 535 EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKS---TESWKGQ 591

Query: 636 RLEVVGEYHLGEFVNRFRHGSLVMRLPD------SDVGQIPTVIFGTVNGVIGVIASLPH 689
           +L    E+H+G  V +F    ++    D      SD      ++FGT++G IG IA L  
Sbjct: 592 KLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPLDE 651

Query: 690 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
             +  L+ LQ  L   +  VGGLN   +R F++  K
Sbjct: 652 LTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGK 687


>gi|317036382|ref|XP_001398211.2| protein cft1 [Aspergillus niger CBS 513.88]
          Length = 1393

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 98/429 (22%), Positives = 179/429 (41%), Gaps = 52/429 (12%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 432
            ++ + LGE    + +   S  + +  C   +    E+ E+H                 F+
Sbjct: 961  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEAISFFPSARGSFI 1020

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +L+   T+  I ++ L   EY  +I + S     N +       VGTA+    E+ P++G
Sbjct: 1021 KLVSPNTWSIIDSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR-GEDIPSRG 1079

Query: 488  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1080 CIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQGQKCMVRGL 1139

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  +         ++GD +K +    Y  E   +   A+D + 
Sbjct: 1140 KEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKMSLFAKDLDY 1199

Query: 597  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              + A E L D   L    A+++ N+  ++ + E        RL    ++H+G F +   
Sbjct: 1200 LEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFHMGNFASTLT 1259

Query: 654  HGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
                 M    ++  S  G     Q P   V+  T NG +G+I  +P E Y  L  LQ+ L
Sbjct: 1260 LLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYRRLSALQSQL 1319

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +     E
Sbjct: 1320 TNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAREWE 1377

Query: 763  LCKRVEELT 771
            +   +E ++
Sbjct: 1378 IKADLEAIS 1386


>gi|241560031|ref|XP_002400960.1| spliceosomal protein sap, putative [Ixodes scapularis]
 gi|215501812|gb|EEC11306.1| spliceosomal protein sap, putative [Ixodes scapularis]
          Length = 1019

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 50/329 (15%)

Query: 467  NVYYCVGTAYVL-----PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKL 521
            N   C G   +L     P   EP  G          +L+L+     + A  +L  F G+L
Sbjct: 710  NPRVCRGGGLLLTYRLAPNPEEPMAGPT--------QLELVHATPVEEAPTALCPFQGRL 761

Query: 522  LAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIY 580
            LA + + ++LY     D G ++L  +C +     A+  +Q  G+ +VV D+ +S   L Y
Sbjct: 762  LAGVGKCLRLY-----DLGRKKLLRKCENKYIPNAIVSIQAMGNRVVVSDVQESFFFLRY 816

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD--------- 631
            K +E  +   A D    W++A  +LD +   GA+   N+  +R  S  + D         
Sbjct: 817  KRQENQLVIFADDSVPRWITASCMLDYETVAGADKFGNVSIIRLPSSISDDVDEDPTGIK 876

Query: 632  --EERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG 682
               +RG L       +V+  +H+GE V   +  +L+        G   ++++ T++G +G
Sbjct: 877  SLWDRGWLGGSSQKADVISNFHIGETVLSLQKATLI-------PGGSESLVYVTLSGTVG 929

Query: 683  VIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESF 741
            V+     HE + F + L+ ++R     + G +H  +RS          KN +DGDL E F
Sbjct: 930  VLVPFTAHEDHDFFQHLEMHMRYENPPLCGRDHLSFRS-----SYFPVKNVIDGDLCEQF 984

Query: 742  LDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              L  ++   I++ ++ +  E+ K++E++
Sbjct: 985  NSLDPSKQKSIAEELDRNPSEVSKKLEDI 1013



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 71  GIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEG 129
           G+ ++E A  EL G    +W+++   D+ FD +++VSF++ T +L++   + +EE    G
Sbjct: 428 GLQVSEMAVSELPGNPNAVWTVKRKADEDFDAYIIVSFVNATLVLSIG--ETVEEVTDSG 485

Query: 130 FCSQTQTLFCHDAIYNQLVQVTSGSVR 156
           F   T TL C     + LVQ  + S R
Sbjct: 486 FLGTTPTLSCAQIGDDALVQALAMSSR 512



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 66/253 (26%)

Query: 3   TFYVLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKD 62
           TF+  P+ L   NL P         +E   +L P +   + DL  +   Q+    G    
Sbjct: 194 TFFFAPRAL--RNLLP---------VEELDSLSPAMGCTIADLANEDTPQLYVACGRGPR 242

Query: 63  GSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
             LR++R+G+  +  A V L  ++  W +    + P              ILA++     
Sbjct: 243 SCLRVLRHGLEASVHAEVLLCVLE--WLIDCDQNVP--------------ILAVHW---- 282

Query: 123 EETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATA 182
                                     QV    +R + +  R   NEW++P   ++     
Sbjct: 283 --------------------------QVYPEGIRHIRADKR--VNEWRTPGKKAIVKCAV 314

Query: 183 NASQVLLATGGGHLVYLEIGD-GILTE-VKHAQLEYEISCLDIN--PIGENPSYSQIAAV 238
           N  QV++A  GG LVY E+   G L E     ++  +I C+ +   P+GE    S+  AV
Sbjct: 315 NQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPVGEQ--RSRFLAV 372

Query: 239 GMWTDISVRIFSL 251
           G+  D +VRI SL
Sbjct: 373 GL-ADNTVRIISL 384


>gi|449470342|ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Cucumis sativus]
          Length = 1504

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 32/276 (11%)

Query: 471  CVGTAYVLPEENEPTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAA 524
             VGTAYV   E+   +GR+L+F V    D    L++E   KE KGA+ +L +  G LL A
Sbjct: 1186 AVGTAYV-QGEDVAARGRVLLFSVGKDADNSQTLVSEVYSKELKGAISALASLQGHLLIA 1244

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG---DFIVVGDLMKSISLLIYK 581
               KI L+KW        EL     +   +  LYV +     +FI++GD+ KSI  L +K
Sbjct: 1245 SGPKIILHKWT-----GAELNGIAFYD--VPPLYVVSLNIVKNFILLGDIHKSIYFLSWK 1297

Query: 582  HEEGAIEERARDYNANWMSAVEILDDDIYLGA-----ENNFNLFTVRKNSEGATDEERG- 635
             +   +   A+D+ +    A E L D   L       + N  +F     S   T+  +G 
Sbjct: 1298 EQGAQLSLLAKDFGSLDCYATEFLIDGSTLSLTVSDDQKNIQIFYYAPKS---TESWKGQ 1354

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPD------SDVGQIPTVIFGTVNGVIGVIASLPH 689
            +L    E+H+G  V +F    ++    D      SD      ++FGT++G IG IA L  
Sbjct: 1355 KLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVSDKTNRFALLFGTLDGSIGCIAPLDE 1414

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
              +  L+ LQ  L   +  VGGLN   +R F++  K
Sbjct: 1415 LTFRRLQSLQKKLGDAVPHVGGLNPRSFRQFHSNGK 1450



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 24/112 (21%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  +N+GP+ DF              + +Q   ++V CSG  K+G+L I+R  I    
Sbjct: 556 VRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCILRQSIRPEM 615

Query: 77  QASVELQGIKGMWSL-----RSST---------DDPFDTFLVVSFISETRIL 114
              VEL G KG+W++     R S          DD +  +L++S  + T +L
Sbjct: 616 ITEVELPGCKGIWTVYHKNTRGSIADSSRMVPDDDEYHAYLIISLEARTMVL 667


>gi|218188544|gb|EEC70971.1| hypothetical protein OsI_02599 [Oryza sativa Indica Group]
          Length = 274

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 78/167 (46%), Gaps = 57/167 (34%)

Query: 584 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
           +G  +E  RDYN  WM+AVE+LDD +Y+GA+N +NLFT  K          GRL V+G+Y
Sbjct: 149 KGQTDELNRDYNITWMTAVEMLDDYVYIGADNCYNLFTELK-------RRVGRLLVIGQY 201

Query: 644 HLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLR 703
           HLG                                                 ++LQ  L 
Sbjct: 202 HLG-------------------------------------------------DQLQLVLA 212

Query: 704 KVIKGVGGLNHEQWRSFNNEKKTVD-AKNFLDGDLIESFLDLSRTRM 749
             IK VG L H QWR+F  + ++V  A+ F+D DLIESFL L  ++M
Sbjct: 213 DYIKSVGNLTHAQWRAFYTDGRSVGVAQGFVDNDLIESFLSLEPSKM 259


>gi|350633238|gb|EHA21604.1| hypothetical protein ASPNIDRAFT_51242 [Aspergillus niger ATCC 1015]
          Length = 1406

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/432 (22%), Positives = 179/432 (41%), Gaps = 55/432 (12%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH------------------- 430
            ++ + LGE    + +   S  + +  C   +    E+ E+H                   
Sbjct: 971  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEDCLAISFFPSARG 1030

Query: 431  -FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEP 484
             F++L+   T+  I ++ L   EY  +I + S     N +       VGTA+    E+ P
Sbjct: 1031 SFIKLVSPNTWSIIDSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR-GEDIP 1089

Query: 485  TKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYK 533
            ++G I VF V            D KL+LI ++  KGAV +L+   G+    + Q  +   
Sbjct: 1090 SRGCIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQGQKCMV 1149

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  +         ++GD +K +    Y  E   +   A+D
Sbjct: 1150 RGLKEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKMSLFAKD 1209

Query: 594  YNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
             +   + A E L D   L    A+++ N+  ++ + E        RL    ++H+G F +
Sbjct: 1210 LDYLEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFHMGNFAS 1269

Query: 651  RFRHGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                    M    ++  S  G     Q P   V+  T NG +G+I  +P E Y  L  LQ
Sbjct: 1270 TLTLLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYRRLSALQ 1329

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+  +   
Sbjct: 1330 SQLTNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIAGRVGAR 1387

Query: 760  VEELCKRVEELT 771
              E+   +E ++
Sbjct: 1388 EWEIKADLEAIS 1399


>gi|330799483|ref|XP_003287774.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
 gi|325082229|gb|EGC35718.1| hypothetical protein DICPUDRAFT_32967 [Dictyostelium purpureum]
          Length = 1453

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 210/496 (42%), Gaps = 64/496 (12%)

Query: 322  SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIAKEGE-- 378
            SSKN   VF    +P  I++    +   +++    +  + PF++A  P+      E +  
Sbjct: 954  SSKNNG-VFIGGQKPVWIFNEKGYIRLHSMDFDGAIVSLKPFHNADCPNGFLYYTEDKQH 1012

Query: 379  LTIGTIDDIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRL 434
            + IG ++ +        IR +P+     +I +  + + + +     Q   E  E     +
Sbjct: 1013 IKIGYLNGLMNFENEYAIRRVPIKLSAHKIAYHNELKCYVVVVSFPQVTQELEEDSKKPI 1072

Query: 435  LDDQTFE-------------FISTYPLDTFE--YGCSILSCSFSDD-----SNVYYCVGT 474
            L D+ F+             FI ++ L   E      I+S  F +      S  +  +GT
Sbjct: 1073 LTDEKFQIKIIDPTIDWSWRFIDSFSLQDRETVLAMKIVSLKFKESDETIKSKPFLVIGT 1132

Query: 475  AYVLPEENEPTKGRILVFIVEDGKLQ------------LIAEKETKGAVYSLNAFNGKLL 522
            A+   E+ +  KGR+LVF +   K Q            L+ EKE KG V +L++ +G LL
Sbjct: 1133 AFTFGEDTQ-CKGRVLVFEIVSHKTQFESDDLGTKRLNLLYEKEQKGPVTALSSVSGLLL 1191

Query: 523  AAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH 582
              I  K+ + +++     T +L +   H   I    + T   +IV+GD+ KS+  L +  
Sbjct: 1192 MTIGPKLTVNQFL-----TGQLVTLSFHDAQIYICSISTIKTYIVIGDMYKSVYFLQWNG 1246

Query: 583  EEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEV 639
            ++  +   ++DY +  + + E + +   L    ++ + N+     +    T  +   L  
Sbjct: 1247 KQ--LVPLSKDYQSLNIFSTEFIVNQQTLSILVSDLDKNILLFSFDPADPTSRQGQMLLC 1304

Query: 640  VGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLE 696
              ++H+G  + +F    +   +  S  G       V FGT++G + V+  L    Y    
Sbjct: 1305 KADFHIGSNIEKFVRTPMKFNIQSSSNGNNNNDQLVFFGTLDGSLNVLRPLDERMYQLFY 1364

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD---------AKNFLDGDLIESFLDLSRT 747
             LQ+ L   +    GLN +Q+R+F +  +             K  LDGDL+  F+ L++ 
Sbjct: 1365 HLQSKLY-YLPQPAGLNAKQYRAFKSFSQNFHFSPSTIHQLPKYILDGDLLSKFVKLNQK 1423

Query: 748  RMDEISKTMNVSVEEL 763
                ++ ++  + +E+
Sbjct: 1424 ERRLLASSVGSNTDEI 1439


>gi|302814354|ref|XP_002988861.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
 gi|300143432|gb|EFJ10123.1| hypothetical protein SELMODRAFT_184138 [Selaginella moellendorffii]
          Length = 1413

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 24/315 (7%)

Query: 471  CVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNAFNGKLLAA 524
             +GT Y L  E+  ++GRI LV + ED        + +  KE KGA+ +L A  G LL A
Sbjct: 1103 AIGTGY-LQGEDVASRGRIILVSLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLA 1161

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            I  KI L+ W    +G+ EL         +  + +    +F++ GD  KSI  L +K E 
Sbjct: 1162 IGPKIILHTW----NGS-ELIGTAFFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEG 1216

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLE 638
              +   A+D+ +    A E L D   L      +  N  +F+   KN+E    +   +L 
Sbjct: 1217 AQLVLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNIQVFSYAPKNAESWKGQ---KLL 1273

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
               E+HLG  V +F    + ++ P S       + FGT++G IG I  L    +  L+ L
Sbjct: 1274 PRVEFHLGSHVTKFLRLQM-LQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTL 1332

Query: 699  QTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            Q  L  ++  V GLN + +R F  N E       N +D + +  +  LS  +   I++ +
Sbjct: 1333 QRKLVDLVPHVAGLNPKAYRQFQANGEHHKHGPDNTVDSEQLREYESLSLDKQVAIARQI 1392

Query: 757  NVSVEELCKRVEELT 771
              + +++   + +++
Sbjct: 1393 GTTRQQIFANLRDIS 1407


>gi|302761560|ref|XP_002964202.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
 gi|300167931|gb|EFJ34535.1| hypothetical protein SELMODRAFT_82277 [Selaginella moellendorffii]
          Length = 1413

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 24/315 (7%)

Query: 471  CVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNAFNGKLLAA 524
             +GT Y L  E+  ++GRI LV + ED        + +  KE KGA+ +L A  G LL A
Sbjct: 1103 AIGTGY-LQGEDVASRGRIILVSLGEDPSDPKVWAKELYSKELKGAISALAALQGHLLLA 1161

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            I  KI L+ W    +G+ EL         +  + +    +F++ GD  KSI  L +K E 
Sbjct: 1162 IGPKIILHTW----NGS-ELIGTAFFDAPLYVVSLNIVKNFVLFGDFHKSIYFLCWKEEG 1216

Query: 585  GAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFT-VRKNSEGATDEERGRLE 638
              +   A+D+ +    A E L D   L      +  N  +F+   KN+E    +   +L 
Sbjct: 1217 AQLVLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNIQVFSYAPKNAESWKGQ---KLL 1273

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
               E+HLG  V +F    + ++ P S       + FGT++G IG I  L    +  L+ L
Sbjct: 1274 PRVEFHLGSHVTKFLRLQM-LQTPGSSRTNRFALCFGTLDGGIGYITPLDELTFRRLQTL 1332

Query: 699  QTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            Q  L  ++  V GLN + +R F  N E       N +D + +  +  LS  +   I++ +
Sbjct: 1333 QRKLVDLVPHVAGLNPKAYRQFQANGEHHKHGPDNTVDSEQLREYESLSLDKQVAIARQI 1392

Query: 757  NVSVEELCKRVEELT 771
              + +++   + +++
Sbjct: 1393 GTTRQQIFANLRDIS 1407


>gi|168021793|ref|XP_001763425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685218|gb|EDQ71614.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1452

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 22/322 (6%)

Query: 463  SDDSNVYYCVGTAYVLPEENEPTKGRI-LVFIVEDGK-----LQLIAEKETKGAVYSLNA 516
            +D +     +GT+YV   E+   KGRI LV + +D +      + +  KE KG++ ++ +
Sbjct: 1134 TDQTQTLLAIGTSYV-QGEDVAAKGRIILVSVGKDPQDPGSWAREVYSKELKGSISAIAS 1192

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSIS 576
              G LL AI  KI L+ W    +G+ EL         +  + +    +FI+ GD+ KSI 
Sbjct: 1193 LQGHLLIAIGPKIILHSW----NGS-ELNGAAFFDAPLYVVSLNIVKNFILFGDIHKSIY 1247

Query: 577  LLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATD 631
             L +K +   +   A+D+ +    A E L D   L      +  N  +F+    S  +  
Sbjct: 1248 FLCWKEDGAQLTLLAKDFGSLDCYATEFLIDGSTLSLLVSDSRKNLQIFSYAPKSMESWK 1307

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQ 691
             ++  L    E+HLG  VN+F H   ++  P S       V+FGT++G I  +A L    
Sbjct: 1308 GQK--LLSRAEFHLGAHVNKF-HRLQMLPTPGSARSNRYAVLFGTLDGAIDYLAPLDELT 1364

Query: 692  YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRM 749
            +  L  LQ  L   +  V G+N   +R F  + K       N +D +L+  +  L     
Sbjct: 1365 FRRLHTLQRKLVDCVSHVAGVNPRAFRQFRCDGKAHRPGPDNIVDCELLSHYDMLPLDEQ 1424

Query: 750  DEISKTMNVSVEELCKRVEELT 771
             EI++ +  +   +   + +L 
Sbjct: 1425 LEIARQIGTTRAHVLSNLRDLA 1446



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 28/158 (17%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  VN+ P+ DF              L +Q   ++V CSG  K+GSL ++   I  + 
Sbjct: 519 VRDSLVNICPLRDFAYGLRSNADQSATGLGKQSNYELVACSGHGKNGSLSVLHQSIRPDL 578

Query: 77  QASVELQGIKGMWSLR--------------SSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              V L G  G+W++               +S DD F  +L++S   E+R + +   D L
Sbjct: 579 INKVALPGCSGIWTVYHKTDRDDSNEFDFGTSEDDEFHAYLIISL--ESRTMVLETGDTL 636

Query: 123 EE-TEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
            E TE   + ++  T+   +    + +VQV    +RL+
Sbjct: 637 GEVTENVEYYTEGNTIAAGNLFGRRFVVQVYQNGLRLL 674


>gi|30681985|ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
 gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
          Length = 1329

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 410 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 469

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 470 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 528

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 529 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 587

Query: 201 IGDGI------LTEVKHAQLEYEISCLDI 223
               +      + E++   L+YE+SC+ +
Sbjct: 588 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 616



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 691
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1170 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1229

Query: 692  YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1230 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1286

Query: 750  DEISKT 755
            + +  T
Sbjct: 1287 ESVLST 1292


>gi|42564075|ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
 gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis thaliana]
 gi|110739103|dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana]
 gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein [Arabidopsis thaliana]
          Length = 1379

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 468 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 527

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 528 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 586

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 587 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 645

Query: 201 IGDGI------LTEVKHAQLEYEISCLDI 223
               +      + E++   L+YE+SC+ +
Sbjct: 646 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 674



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 691
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1220 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1279

Query: 692  YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1280 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1336

Query: 750  DEISKT 755
            + +  T
Sbjct: 1337 ESVLST 1342


>gi|6671952|gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
 gi|10998135|dbj|BAB03106.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1331

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+DF V+D + + + Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 440 NIAPILDFSVMDDQNEKRDQIFACCGVTPEGSLRIIRSGINVEKLLKTAPVYQGITGTWT 499

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + +FLV+SF+ ETR+L++ L  + + T+  GF S   T  C       LVQ+
Sbjct: 500 VKMKLTDVYHSFLVLSFVEETRVLSVGLSFK-DVTDSVGFQSDVCTFACGLVADGLLVQI 558

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              ++RL   T          S    + W  P   S+++     + ++++T     + + 
Sbjct: 559 HQDAIRLCMPTMDAHSDGIPVSSPFFSSW-FPENVSISLGAVGQNLIVVSTSNPCFLSIL 617

Query: 201 IGDGI------LTEVKHAQLEYEISCLDI 223
               +      + E++   L+YE+SC+ +
Sbjct: 618 GVKSVSSQCCEIYEIQRVTLQYEVSCISV 646



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 643  YHLGEFVNRFRHGSLVMRLPDSDVGQI-----------PTVIFGTVNGVIGVIASLPHEQ 691
            Y++GE     + G  + +LP  DV +             T+I GT+ G I V A +  E+
Sbjct: 1172 YYMGEIAMSIKKGCNIYKLPADDVLRSYGLSKSIDTADDTIIAGTLLGSIFVFAPISSEE 1231

Query: 692  YLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            Y  LE +Q  L    +   V G +H ++R   N  +   A+  LDGD++  FL+L+  + 
Sbjct: 1232 YELLEGVQAKLGIHPLTAPVLGNDHNEFRGRENPSQ---ARKILDGDMLAQFLELTNRQQ 1288

Query: 750  DEISKT 755
            + +  T
Sbjct: 1289 ESVLST 1294


>gi|28175094|gb|AAH31197.2| Sf3b3 protein, partial [Mus musculus]
          Length = 494

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 159 LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLH 218

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 219 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 271

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 272 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 331

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 332 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 388

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 389 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 443

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 444 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 488


>gi|193785523|dbj|BAG50889.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 168 LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 227

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 228 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 280

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 281 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 340

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 397

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 398 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 452

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 453 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 497


>gi|407044064|gb|EKE42344.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1145

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 160/797 (20%), Positives = 315/797 (39%), Gaps = 93/797 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            +E + R+ +L P++D  V      Q   ++    G     +++I++N +   +   +EL 
Sbjct: 385  LEEIYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELP 444

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
             I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E         T +L     
Sbjct: 445  AIPISIWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSECTTSPILLSTPSLLVSML 502

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH---LVYL 199
                 +QV +  + + S   ++   E +         A+ N S+++++    +   L+Y 
Sbjct: 503  FDGTFLQVMTDRIIIYSEPIQQFITEDQK-----YVCASCNGSELIVSVEKNNQTSLIYF 557

Query: 200  EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD----- 253
            +   G L  ++      +I+ L ++    +PS  +  A+G   D SV + SL P+     
Sbjct: 558  QYQSGHLLTMERKDNLSKITALALDQF--HPS--KHCAIGC-IDGSVHLLSLIPNETTKA 612

Query: 254  LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 313
            L+ ++ +     I   S+     +  SYL   L +G L   + +  +GE+ +     +G+
Sbjct: 613  LSRVSLQTYECSI--NSLTFNIIDNTSYLFAGLSNGLLGRSVYDPISGEINESSLNFVGS 670

Query: 314  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
            +P+TL          V A S R  + Y +  K+  + +N++  +  C        +++AI
Sbjct: 671  RPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAI 730

Query: 374  AKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM--- 429
              E  + I TI+     L  ++I +   PR++          I    N SC   +E+   
Sbjct: 731  ICEKVMKIITIESTSSSLTGKNIQISYTPRKVITHPTIPLLYILEGDNNSCKVGNEIIQT 790

Query: 430  ------HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSDDSNVYYCVGTAYVLPE 480
                    +  LD    E I     D  ++   GC + S S    +  Y  VG   +   
Sbjct: 791  NEGNWVGGIHTLDASQDELIQFIDFDNNKHPTGGCVVRSIS---KNQTYLIVGV--IESY 845

Query: 481  ENEPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----K 533
            +  P + +   I V+ + +  +      + +  V +   F G +LA +   ++LY    K
Sbjct: 846  KTRPIQWKSSEIQVYSINERSINYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLK 905

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
             +L+    R+  S+           +   G+ I++  +    +L+ Y       +  A D
Sbjct: 906  SLLKKAEKRQFASDIAQ--------LHVIGETILLTGVSDGFNLIRYNQINHKFDIYA-D 956

Query: 594  YNANWMSAVEILDDDIYLGA----------------ENNFNLF-TVRKNSEGATDEERGR 636
                W+     L+    L +                E   N F T+ +  +   +    +
Sbjct: 957  SLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEQALNPFSTLLQPHKTIYEGSSYK 1016

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYL 693
            +    ++ +G+    F   SL+   P          IF   N + G+ A +P        
Sbjct: 1017 MVTATQFFVGDIATSFAQCSLIPGAPS---------IFLYSNFMGGLSALIPLQSQNDID 1067

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
            F + L+ ++R     +   NH  +RS       V  K+ +DGDL E +  L      EI+
Sbjct: 1068 FYQHLEMHMRVHWTNLTDRNHISFRS-----SIVPVKDTVDGDLCELYERLPYEIQQEIA 1122

Query: 754  KTMNVSVEELCKRVEEL 770
            + M   V E+ K++ +L
Sbjct: 1123 EEMEKEVNEIIKKLHDL 1139


>gi|255539681|ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
 gi|223550020|gb|EEF51507.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 50/404 (12%)

Query: 402  RRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQT----FEFISTYPLDTFEYGCSI 457
            + + HQ ++   +   L      EE E   VR+L+ +     ++  +T P+ + E   ++
Sbjct: 1068 QEVGHQIENHNLSSDELLQTYSVEEFE---VRILESENGGGPWQTKATIPMQSSENALTV 1124

Query: 458  ----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV----EDGKLQLIAE---KE 506
                L  + + ++     +GTAYV   E+   +GR+L+F V    E+ ++ L++E   KE
Sbjct: 1125 RVVTLFNATTKENETLLAIGTAYV-QGEDVAARGRVLLFSVVKSTENSQV-LVSEVYSKE 1182

Query: 507  TKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG--- 563
             KGA+ +L +  G LL A   KI L+KW     GT EL     +      LYV +     
Sbjct: 1183 LKGAISALASLQGHLLIASGPKIILHKWT----GT-ELNGVAFYDAP--PLYVASMNIVK 1235

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 618
            +FI++GD+ KSI  L +K +   +   A+D+ +    A E L D   L       + N  
Sbjct: 1236 NFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQ 1295

Query: 619  LFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------- 670
            +F     +    +  +G +L    E+H+G  + +F   S++    D   G  P       
Sbjct: 1296 IFYY---APKMLESWKGQKLLSRAEFHVGAHITKFIRLSMLSTSSDRS-GAAPGPDKTNR 1351

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT--V 727
              ++FGT++G IG IA L    +  L+ LQ  L   +  V GLN   +R F ++ K    
Sbjct: 1352 FALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRSDGKVHRP 1411

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
              ++ +D +L+  F  L      EI++ +  +  ++   + +L+
Sbjct: 1412 GPESIVDCELLSHFEMLPLEEQLEIAQQVGTTRAQILSNLNDLS 1455



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 27/148 (18%)

Query: 15  NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 64
           N +   K     V +  +N+GP+ DF              + +Q    +V CSG  K+G+
Sbjct: 494 NTESAQKSFSFAVRDSLINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVCCSGHGKNGT 553

Query: 65  LRIVRNGIGINEQASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISE 110
           L I+R  I       V+L G +G+W++               ++  D +  +L++S   E
Sbjct: 554 LCILRQSIRPEMITEVDLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHAYLIISM--E 611

Query: 111 TRILAMNLEDELEE-TEIEGFCSQTQTL 137
            R + +   D L E TE   +  Q +T+
Sbjct: 612 ARTMVLETADLLSEVTESVDYFVQGRTI 639


>gi|308459872|ref|XP_003092248.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
 gi|308253976|gb|EFO97928.1| CRE-CPSF-1 protein [Caenorhabditis remanei]
          Length = 1448

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 146/312 (46%), Gaps = 29/312 (9%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++PT  R         K++++ +KE KG V  L A NG LL+ + QK+  + W  
Sbjct: 1147 VVPEPDQPTSNR---------KIKVLFDKEQKGPVTGLCAINGLLLSGMGQKV--FIWQF 1195

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD--Y 594
            +D+    L S    H ++  L+  +     +  D  +S+SL+ ++ E  A+   +RD   
Sbjct: 1196 KDNDLMGL-SFLDMHYYVYQLH--SLRTIALACDARESMSLIRFQEENKAMSIASRDDRR 1252

Query: 595  NANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
             A    A + + D  +LG   ++ N N+     + E        RL V    ++G  VN 
Sbjct: 1253 TAKPPMAAQFVVDGAHLGFLLSDENGNITLFNYSPEAPESNGGERLTVRAAMNIGTNVNA 1312

Query: 652  F----RHGSLVMRLPDSD---VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            F     H SL+    D +   V Q  + IFG+++G  G +  L  + Y  L  LQT +  
Sbjct: 1313 FLRVKGHTSLLNLQSDEEKESVEQRMSTIFGSLDGSFGFVRPLSEKSYRRLHFLQTFIGS 1372

Query: 705  VIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
            V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V   
Sbjct: 1373 VTPQIAGLHIKGARSARPAQPIVNGRNARNLIDGDVVEQYLHLSLYDKTDLARRLGVGRY 1432

Query: 762  ELCKRVEELTRL 773
             +   +  L R+
Sbjct: 1433 HIIDDLMHLRRM 1444


>gi|26351753|dbj|BAC39513.1| unnamed protein product [Mus musculus]
          Length = 463

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 128 LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLH 187

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 188 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 240

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 241 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 300

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 301 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 357

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 358 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 412

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 413 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 457


>gi|326511015|dbj|BAJ91855.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 46/366 (12%)

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD-DSNVYYCVGTAYVLPEENEPTKG--- 487
           +R+LD ++ +      L   E   SI + +F D +      VGT   L  +  P +    
Sbjct: 355 IRILDPRSRDTTCLLELQDNEAAVSICTVNFHDKEHGTLLAVGTTKGL--QFWPKRSLAS 412

Query: 488 ---RILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL 544
               I  F+ E   L+L+ + + +    SL  F G+LLA +   ++LY     D G R+L
Sbjct: 413 GFIHIYKFVNEGKSLELLHKTQVEEVPLSLCQFQGRLLAGVGSVLRLY-----DLGKRKL 467

Query: 545 QSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE 603
             +C +      +  + T  D I VGD+ +S     Y+ +E  +   A D    W++A  
Sbjct: 468 LRKCENKLFPRTIVSIHTYRDRIYVGDMQESFHYCKYRRDENQLYIFADDSVPRWLTAAN 527

Query: 604 ILDDDIYLGAENNFNLFTVR------------------KNSEGATDEERGRLEVVGEYHL 645
            +D D   GA+   N++  R                  K  +G  +    ++E + ++H+
Sbjct: 528 HIDFDTMAGADKFGNIYFARLPQDLSDEIEEDPTGGKIKWEQGKLNGAPNKVEEIVQFHV 587

Query: 646 GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRK 704
           G+ V   +  SL+        G    +I+GTV G +G ++A    E   F   L+ +LR+
Sbjct: 588 GDVVTCLQKASLI-------PGGGECLIYGTVMGSVGALLAFTSREDVDFFSHLEMHLRQ 640

Query: 705 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
               + G +H  +RS          K+ +DGDL E +  L      +I+  ++ +  E+ 
Sbjct: 641 EHPPLCGRDHMAYRS-----AYFPVKDVIDGDLCEQYPSLPADMQRKIADELDRTPGEIL 695

Query: 765 KRVEEL 770
           K++E++
Sbjct: 696 KKLEDI 701



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 19/300 (6%)

Query: 145 NQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-D 203
           + L+QV    +R +    R   NEW++P   ++    +N  QV++A  GG L+Y E+   
Sbjct: 2   DSLMQVHPNGIRHIREDGR--VNEWRTPGKKTITKVGSNRLQVVIALSGGELIYFEMDMT 59

Query: 204 GILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHL 262
           G L EV+   +  +++CL I P+ E    S+  AVG + D ++RI SL PD  L      
Sbjct: 60  GQLMEVEKQDMSGDVACLAIAPVPEGRQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQ 118

Query: 263 GGEIIPRSVLLCAFE-------GISY-----LLCALGDGHLLNFLLNMKTGELTDRKKVS 310
                P S+L    +       G  Y     L   L +G L    ++M TG+L+D +   
Sbjct: 119 SVSSAPESLLFLEVQASVGGEDGADYPANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRF 178

Query: 311 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
           LG +P  L      +   +   S RP + Y      L + ++   +     F+S    + 
Sbjct: 179 LGLRPPKLFPCIVSHRQAMLCLSSRPWLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEG 238

Query: 371 LAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 428
           +       L I TI+ + +  +  SIPL   PR+     + +  A+  S K    AE+ E
Sbjct: 239 VVAVAGDALRIFTIERLGETFNETSIPLRYTPRKFVILPKKKYLAVIESDKGAFSAEQRE 298


>gi|285999|dbj|BAA02805.1| KIAA0017 [Homo sapiens]
          Length = 399

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 64  LEQNEAAFSVAVCRFSNTGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 123

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 124 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 176

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 177 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 236

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 293

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 294 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 348

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 349 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 393


>gi|391328522|ref|XP_003738737.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Metaseiulus occidentalis]
          Length = 1500

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 178/426 (41%), Gaps = 60/426 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCA----------------EESEMHFVRLL 435
            +R IP+ E P  + +   SRT+ + + K ++                   ES       +
Sbjct: 1067 MRKIPIYETPHSVNYHVDSRTYCVATSKEETATCVPKLANEDKEFEPIERESSRFIPPTV 1126

Query: 436  DDQTFEFIST----------YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 480
            D    E  S            P++ +E    + +   + +           VGT +   E
Sbjct: 1127 DKFALELWSPVSWEAIPNTRMPMEDWEKITCVKNVMIASEGTTSGEKGLIAVGTIHNFGE 1186

Query: 481  ENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            +    KGRIL+      + E G      K++ I  K     V +L +  G L+AA+ QK+
Sbjct: 1187 DIT-AKGRILLIDIIEVVPEPGQPLTRSKVKTILSKPQNAPVTALCSVKGHLMAAVGQKL 1245

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
             L++  L+D+   +L         I  L   +   FI++GD+ KSI+LL Y+ E   +  
Sbjct: 1246 FLFQ--LKDN---DLVGMAFLDTQIYILSAISIKSFILIGDVHKSITLLRYQEESKTLAV 1300

Query: 590  RARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
             ++D     + ++E L D+    +L  +   N+       E        RL   G++++G
Sbjct: 1301 VSKDTKPVQIYSIEYLVDNSQMAFLATDAQCNILVYMYQPENRETFGGQRLIRRGDFNIG 1360

Query: 647  EFVNR-FRHGSLVMRLPDS------DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
              +N  FR    +  +P S      D+      ++ +++G  G +  +  + Y  L  LQ
Sbjct: 1361 SRINTMFRIRCRLAEVPRSERRLLSDLEARHVTLYASLDGAFGYLLPISEKTYRRLLMLQ 1420

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMN 757
              L    + VGGLN + +R    + + +    KN +DGDLI  F+DL+     E+++ + 
Sbjct: 1421 NVLNSYCQHVGGLNPKAFRIMQTDVRALSNPQKNIVDGDLINVFMDLNFNEKAEVARKIG 1480

Query: 758  VSVEEL 763
             +V ++
Sbjct: 1481 TTVHQI 1486



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 15  NLQPDAKGSY---VEVLERYVNLGPIVDFCV--------VDLERQGQGQVVTCSGAYKDG 63
           N + D  G+    +EV +R   LGP+    +        + ++   + ++    G  + G
Sbjct: 526 NCEADCLGTTCYKLEVTDRLQTLGPVTKVAMGEPAFQSELSMKTDTEVEIFAACGHERSG 585

Query: 64  SLRIVRNGIGINEQASVELQGIKGMWSLRSST------DDPFDTFLVVSFISETRILAMN 117
           +L +++  +      + EL G   +W++RSS+      D+    FL++S    T IL   
Sbjct: 586 ALCVLQRTVRPQVITTFELPGCTDLWTVRSSSTRSPDVDEDSHQFLILSRPDSTMILQTG 645

Query: 118 LEDELEETEIEGFCSQTQTLFCHD-AIYNQLVQVTSGSVRLV 158
              E+ E +  GFC+Q+ T+F  + A    ++QV   SVRL+
Sbjct: 646 --QEINELDHSGFCTQSPTIFAGNLADGRYIIQVCPNSVRLL 685


>gi|449437538|ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 22/210 (10%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+D  VVD   + Q Q+  C G   +GSLRI+RNGI +    + S   QGI  +W+
Sbjct: 458 NIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWT 517

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + ++LV+SF+ ETR+L++ L   ++ T+  GF S T TL C       ++Q+
Sbjct: 518 IKMKRSDTYHSYLVLSFVEETRVLSVGLS-FIDVTDSVGFQSDTCTLACGLLDDGLVIQI 576

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              +VRL   T          S      W  P    +++     + ++++T     +++ 
Sbjct: 577 HQNAVRLCLPTKIAHSEGIELSSPACTSW-FPDNIGISLGAVGHNVIVVSTSNPCFLFI- 634

Query: 201 IG-------DGILTEVKHAQLEYEISCLDI 223
           +G       D  + E ++ +L+YE+SC+ I
Sbjct: 635 LGVRKVSGYDYEIYEKQYLRLQYELSCISI 664



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 20/201 (9%)

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--NFNLFTVR 623
            I VGD    I    Y+ +   +E+   D +   ++   +LD D  + ++   +  + +  
Sbjct: 1139 IAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCS 1198

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP---------T 671
               E     E   L +   Y++GE     R GS   +LP  D+     +P         T
Sbjct: 1199 DRLEDNASPE-CNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAVPGSDFDSSHNT 1257

Query: 672  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTVDA 729
            +I  T+ G I +   L  ++Y  LE +Q  L    +   + G +H ++RS  N    +  
Sbjct: 1258 IIASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENP---IGV 1314

Query: 730  KNFLDGDLIESFLDLSRTRMD 750
               LDGD++  FL+L+  + +
Sbjct: 1315 PKILDGDILTQFLELTSMQQE 1335


>gi|53136520|emb|CAG32589.1| hypothetical protein RCJMB04_30d19 [Gallus gallus]
          Length = 503

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 162/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAY-VLPEENEPTKGRILVFIVEDG--KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  ++        G +  + + +G  KL+ + 
Sbjct: 168 LEQNEAAFSVAVCRFSNTGEEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLH 227

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 228 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYICGIQ 280

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 281 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNIC 340

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 341 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 397

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 398 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 452

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +++ ++ +  E+ K++E++
Sbjct: 453 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRTPPEVSKKLEDI 497


>gi|449526686|ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 22/210 (10%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+D  VVD   + Q Q+  C G   +GSLRI+RNGI +    + S   QGI  +W+
Sbjct: 458 NIAPILDMSVVDKHDEKQDQMFACCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWT 517

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + ++LV+SF+ ETR+L++ L   ++ T+  GF S T TL C       ++Q+
Sbjct: 518 IKMKRSDTYHSYLVLSFVEETRVLSVGLS-FIDVTDSVGFQSDTCTLACGLLDDGLVIQI 576

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              +VRL   T          S      W  P    +++     + ++++T     +++ 
Sbjct: 577 HQNAVRLCLPTKIAHSEGIELSSPACTSW-FPDNIGISLGAVGHNVIVVSTSNPCFLFI- 634

Query: 201 IG-------DGILTEVKHAQLEYEISCLDI 223
           +G       D  + E ++ +L+YE+SC+ I
Sbjct: 635 LGVRKVSGYDYEIYEKQYLRLQYELSCISI 664


>gi|67472417|ref|XP_652013.1| splicing factor 3B subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56468814|gb|EAL46625.1| splicing factor 3B subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
 gi|449709507|gb|EMD48761.1| premRNA-splicing factor rse-1, putative [Entamoeba histolytica KU27]
          Length = 1145

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 159/797 (19%), Positives = 314/797 (39%), Gaps = 93/797 (11%)

Query: 25   VEVLERYVNLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
            +E + R+ +L P++D  V      Q   ++    G     +++I++N +   +   +EL 
Sbjct: 385  LEEIYRFKSLAPLIDLKVAPATSSQDTTKMYAFCGKGNQSTIKILKNQLNTLDAVEIELP 444

Query: 84   GIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDA 142
             I   +W L+  TD+ +  +L +S+ + T +L +  EDE+ E         T +L     
Sbjct: 445  AIPISIWPLKKETDE-YHQYLAISYSNITTLLKIT-EDEMSECTTSPILLSTPSLLVSML 502

Query: 143  IYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH---LVYL 199
                 +QV +  + + S   ++   E +         A+ N  +++++    +   L+Y 
Sbjct: 503  FDGTFLQVMTDRIIIYSEPIQQFITEDQK-----YVCASCNGCELIVSVEKNNQTSLIYF 557

Query: 200  EIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD----- 253
            +   G L  ++      +I+ L ++    +PS  +  A+G   D SV + SL P+     
Sbjct: 558  QYQSGHLLTMERKDNLSKITALALDQF--HPS--KHCAIGC-IDGSVHLLSLIPNETTKA 612

Query: 254  LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGT 313
            L+ ++ +     I   S+     +  SYL   L +G L   + +  +GE+ +     +G+
Sbjct: 613  LSRVSLQTYECSI--NSLTFNIIDNTSYLFAGLSNGLLGRSVYDPISGEINESSLNFVGS 670

Query: 314  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
            +P+TL          V A S R  + Y +  K+  + +N++  +  C        +++AI
Sbjct: 671  RPVTLSNVKDCGEDSVLAISGRSLLSYKNGTKIKTTPLNIQNTTLACGILVPFVDNAIAI 730

Query: 374  AKEGELTIGTIDDI-QKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM--- 429
              E  + I TI+     L  ++I +   PR++          I    N SC   +E+   
Sbjct: 731  ICEKVMKIITIESTSSSLTGKNIQISYTPRKVITHPTIPLLYILEGDNNSCKVGNEIIQT 790

Query: 430  ------HFVRLLDDQTFEFISTYPLDTFEY---GCSILSCSFSDDSNVYYCVGTAYVLPE 480
                    +  LD    E I     D  ++   GC + S S    +  Y  +G   +   
Sbjct: 791  NEGNWVGGIHTLDASQDELIQFIDFDNNKHPTGGCVVRSIS---KNQTYLIIGV--IESY 845

Query: 481  ENEPTKGR---ILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----K 533
            +  P + +   I V+ + +  +      + +  V +   F G +LA +   ++LY    K
Sbjct: 846  KTRPIQWKSSEIQVYSINERSINYCYSTKVEYPVRAFAEFKGMVLAGVGNILRLYDIGLK 905

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
             +LR    R+  S+           +   G+ I++  +    +L+ Y       +  A D
Sbjct: 906  SLLRKAEKRQFASDIAQ--------LHVIGETILLTGVSDGFNLIRYNQINHKFDIYA-D 956

Query: 594  YNANWMSAVEILDDDIYLGA----------------ENNFNLF-TVRKNSEGATDEERGR 636
                W+     L+    L +                E   N F T+ +  +   +    +
Sbjct: 957  SLPRWVVTAAPLNQSTVLASDKFGEIFMYQLPKEIEEQALNPFSTLLQPHKTIYEGSSYK 1016

Query: 637  LEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYL 693
            +    ++ +G+    F   SL+   P          IF   N + G+ A +P        
Sbjct: 1017 MVTATQFFVGDIATSFAQCSLIPGAPS---------IFLYSNFMGGLSALIPLQSQNDID 1067

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
            F + L+ ++R     +   NH  +RS       V  K+ +DGDL E +  L      EI+
Sbjct: 1068 FYQHLEMHMRVHWTNLTDRNHISFRS-----SIVPVKDTVDGDLCELYERLPYEIQQEIA 1122

Query: 754  KTMNVSVEELCKRVEEL 770
            + M   V E+ K++ +L
Sbjct: 1123 EEMEKEVNEIIKKLHDL 1139


>gi|75145059|sp|Q7XWP1.2|CPSF1_ORYSJ RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
 gi|38345987|emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 159/353 (45%), Gaps = 33/353 (9%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 493
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL  E+   +GR+L+F   
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL-GEDVAARGRVLLFSFT 1153

Query: 494  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
              +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 1208

Query: 551  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
               +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1209 DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 1268

Query: 611  LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 1269 LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 1322

Query: 665  DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
             +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 1323 GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 1382

Query: 721  --NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
              N +       N +D +L+ S+  LS     ++++ +  +  ++     +++
Sbjct: 1383 HSNGKGHRPGPDNIIDFELLCSYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1435



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 21/141 (14%)

Query: 15  NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 64
           +L+   K SY+ V +  +N+GP+ DF            +   +Q   ++V CSG  K+GS
Sbjct: 499 SLESAQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 65  LRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMN 117
           L +++  I  +    VEL   +G+W++       + + D+ +  +L++S   E R + + 
Sbjct: 558 LSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISL--ENRTMVLE 615

Query: 118 LEDELEE-TEIEGFCSQTQTL 137
             D+L E TE   +  Q  T+
Sbjct: 616 TGDDLGEVTETVDYFVQASTI 636


>gi|322792443|gb|EFZ16427.1| hypothetical protein SINV_15375 [Solenopsis invicta]
          Length = 1532

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 39/321 (12%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  +GT Y   E+   ++GRIL+F     + E G      + + I  KE KG + ++   
Sbjct: 1060 YIVLGTNYNYGEDIT-SRGRILIFDIIEVVPEPGQPLTKNRFKQIYAKEQKGPITAITQV 1118

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
            +G L++A+ QKI  Y W L+D+   G   + ++   H  +L++        I++ D+ KS
Sbjct: 1119 SGFLVSAVGQKI--YIWQLKDNDLVGVAFIDTQIYIH-QMLSI-----KSLILIADVYKS 1170

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 629
            ISLL ++ E   +   +RD+    +  +E L D+  LG      E+N  LF  +  S  +
Sbjct: 1171 ISLLRFQEEYRTLSLVSRDFRPAEVYTIEYLIDNTNLGFIVADGESNLALFMYQPESRES 1230

Query: 630  TDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNGVIGV 683
               +  +L    ++HLG+ VN F      +  P +D  Q          ++ +++G +G 
Sbjct: 1231 LGGQ--KLIRKADFHLGQKVNTFFRIRCRVTDPANDKKQFSGADKRHVTMYASLDGSLGY 1288

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNN---EKKTVDAKNFLDGDLIES 740
            I  +P + Y  L  LQ  L   I  + GLN + +R         +   A+  +DGDL+  
Sbjct: 1289 ILPVPEKTYRRLLMLQNVLVTHICHIAGLNPKSYRHTYKSYIRNQGNPARGIIDGDLVWR 1348

Query: 741  FLDLSRTRMDEISKTMNVSVE 761
            +L L      +++K +   V+
Sbjct: 1349 YLFLPNNEKADLAKKIGTRVQ 1369



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 21/155 (13%)

Query: 23  SYV-EVLERYVNLGPIVDFCVVD--------LERQGQG-QVVTCSGAYKDGSLRIVRNGI 72
           SY+ EV +  +N+GP  +  + +        L+ Q    ++VT SG  K+G+L +++  I
Sbjct: 435 SYIFEVCDSLLNIGPCGNISMGEPAFLSEEFLQNQDPDVELVTTSGYGKNGALCVLQRSI 494

Query: 73  GINEQASVELQGIKGMWSLRSS-TDDPFDT-------FLVVSFISETRILAMNLEDELEE 124
                 + EL G + MW++  +  +D   T       FL++S    T IL      E+ E
Sbjct: 495 RPQVVTTFELPGCEDMWTVIGTLNNDEIKTEAEGSHAFLILSQEDSTMILQTG--QEINE 552

Query: 125 TEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
            +  GF +Q  T+F  +   N+ +VQVT   VRL+
Sbjct: 553 VDQSGFSTQGSTVFAGNLGANRYIVQVTQMGVRLL 587


>gi|12653387|gb|AAH00463.1| SF3B3 protein [Homo sapiens]
 gi|13111947|gb|AAH03146.1| SF3B3 protein [Homo sapiens]
          Length = 399

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 45/349 (12%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+    +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 64  LEQNEAAFSVAVCRFSNIGEDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 123

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 124 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 176

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 177 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 236

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 237 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 293

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               G   ++++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+ 
Sbjct: 294 ----GGSESLVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY- 348

Query: 722 NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
                   KN +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 349 ----YFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 393


>gi|390347522|ref|XP_003726804.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Strongylocentrotus purpuratus]
          Length = 1439

 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 38/322 (11%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  V T +V  E+ + T+G + ++     + E G      KL+ + EK  KG V +L   
Sbjct: 1115 YVVVATTHVYSEDLQ-TRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALCEV 1173

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
             G LL  I QK+  Y W  +D+   G   + ++   H  +      +   FI++ D+MK 
Sbjct: 1174 MGFLLTCIGQKV--YMWQFKDNDLIGLAFIDTQIYIHNAV------SVKQFILITDVMKG 1225

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATD 631
               L Y+ ++  +   +RD     +   E + DD    +L ++ + NL     + E    
Sbjct: 1226 AYFLQYQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPES 1285

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--------PTVIFGTVNGVIGV 683
                 L   G+ ++G  VN F    +  RL D    Q+          V F T++G +G+
Sbjct: 1286 HGGAYLLRRGDMNIGSAVNTFVR--VRCRLTDPSTEQVLSGPVLRRQVVFFATLDGSLGL 1343

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESF 741
            +  +  + Y  L  LQ  L   +  VGGLN + +R   +  + ++   +N LDGDL+  +
Sbjct: 1344 LLPMVEKTYRRLLMLQNVLTNGLPHVGGLNPKSYRHVKSHMRNLNNPHRNILDGDLLLKY 1403

Query: 742  LDLSRTRMDEISKTMNVSVEEL 763
              LS    +E +K +  SV+++
Sbjct: 1404 CHLSVVERNEFAKKIGTSVDQI 1425


>gi|84996279|ref|XP_952861.1| splicing factor 3b subunit [Theileria annulata strain Ankara]
 gi|65303859|emb|CAI76236.1| splicing factor 3b subunit, putative [Theileria annulata]
          Length = 1340

 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 158/362 (43%), Gaps = 62/362 (17%)

Query: 9   KQLIKLNLQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 58
           K +I  +L PDAK + +           V++R  ++G +VD  V D+       +    G
Sbjct: 424 KDVICTSLHPDAKNAIIAFKPRVLQNLVVVDRMSSMGLVVDMKVADVMGLNNYDIFVACG 483

Query: 59  AYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            + +  L+ +R G    E A  EL G  K +++++S  +  FD ++++SF   T +L++ 
Sbjct: 484 RWYNSRLKCLRYGFNTEELAFNELPGRPKHVFTIKS-LESNFDEYIIISFQGNTLVLSIG 542

Query: 118 LEDELEETEIEGFCSQTQTLFCHDAIYNQ------------------------------- 146
             + +EE     F +   TL C    Y                                 
Sbjct: 543 --EAVEEVTDSFFLTSITTLHCCYMSYRNGVSSSGVGGVSGVSGVGTVTNGVPVTGGTGI 600

Query: 147 ----LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG 202
                VQ+  G  R +S    ++  EWK      V +A  N +Q++L   GG ++Y ++ 
Sbjct: 601 TRGIYVQIHDGGYRYLSG---DIIKEWKVQSTKRVKLADNNDTQLILVLTGGEIIYFQLT 657

Query: 203 DG---ILTEVKHAQLEYEISCLDI-NPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNLI 257
           D     L EV    L  EI+CL I +P   + + ++    G   +I VRI  L  +L L 
Sbjct: 658 DTEVPELVEVGRRNLSTEITCLAIQHP--NSGTKAEFCCCGSIDNI-VRIMKLDKNLKLC 714

Query: 258 TKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPIT 317
           + + LG   +P SV L   + I YL   L +G L+   L+M  G L D++   +GT+P+ 
Sbjct: 715 SSQILGNNSLPESVTLLTNDEI-YLYVGLNNGVLIRNTLDM-IGNLIDQESRFMGTKPLK 772

Query: 318 LR 319
           L+
Sbjct: 773 LK 774



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 161/381 (42%), Gaps = 47/381 (12%)

Query: 413  FAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCV 472
            F +  LKN           +R+++    E I+       E   +  +C    +S     V
Sbjct: 979  FEVMELKNYRAGVGKWSSCIRIINPINLETIAKLLFTENEAATTAYTCIL--NSIQLLIV 1036

Query: 473  GT---AYVLP---EENEPTKGRILVF--------IVEDGKLQLIAEKETKGAVYSLNAFN 518
            GT   A++ P   + N+  +  I V+        +V    ++L+    TKG +   N + 
Sbjct: 1037 GTIKNAHLYPTHMDVNDEVESCIRVYEYDSNYNNLVNGFNIKLLHITNTKGWIRCFNNYE 1096

Query: 519  GKLL-AAINQKIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMK 573
             KLL  AI  K+++Y    K ML     R L S    HG    + ++  G  I  GD+ +
Sbjct: 1097 NKLLLCAIGSKLRMYSLGKKQMLLKGEHRSLTS----HGF---MDIKVIGSRIYCGDIRE 1149

Query: 574  SISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGAT 630
            S+ LL    Y  + G  E         W+S++E+LD    + A + F+   V +      
Sbjct: 1150 SVQLLRIKFYGEDLGEFELTTTSTGPRWLSSMELLDYSTVI-AGDKFDSIFVSRVPHNED 1208

Query: 631  DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHE 690
                   E   ++HLG+ V  F+   + +    S+V     V++ T+ G IGV+     +
Sbjct: 1209 VVRSNYFEYHNQFHLGDIVTSFQR--VRINPIHSEV-----VLYTTLMGSIGVLVPFVSK 1261

Query: 691  QYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
              L FL+ L+  +   I  V G   + +RS+         +N +DGDL E ++ L     
Sbjct: 1262 DELDFLQHLEMLMCNQIDTVTGREVQMFRSY-----YFPVQNIVDGDLCEMYMTLDDKY- 1315

Query: 750  DEISKTMNVSVEELCKRVEEL 770
              I+  +N+ V E+ K+++ +
Sbjct: 1316 -NIANQLNLKVNEIIKKLKNI 1335


>gi|390358535|ref|XP_789715.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Strongylocentrotus purpuratus]
          Length = 1223

 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 38/322 (11%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  V T +V  E+ + T+G + ++     + E G      KL+ + EK  KG V +L   
Sbjct: 899  YVVVATTHVYSEDLQ-TRGSVYIYDCIEVVPEPGQPLTKNKLKPLYEKRQKGPVSALCEV 957

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
             G LL  I QK+  Y W  +D+   G   + ++   H  +      +   FI++ D+MK 
Sbjct: 958  MGFLLTCIGQKV--YMWQFKDNDLIGLAFIDTQIYIHNAV------SVKQFILITDVMKG 1009

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATD 631
               L Y+ ++  +   +RD     +   E + DD    +L ++ + NL     + E    
Sbjct: 1010 AYFLQYQAQDRTLSLVSRDARPLEIFGCEFMVDDKQMAFLVSDADKNLIVFHYHPEAPES 1069

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI--------PTVIFGTVNGVIGV 683
                 L   G+ ++G  VN F    +  RL D    Q+          V F T++G +G+
Sbjct: 1070 HGGAYLLRRGDMNIGSAVNTFVR--VRCRLTDPSTEQVLSGPVLRRQVVFFATLDGSLGL 1127

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESF 741
            +  +  + Y  L  LQ  L   +  VGGLN + +R   +  + ++   +N LDGDL+  +
Sbjct: 1128 LLPMVEKTYRRLLMLQNVLTNGLPHVGGLNPKSYRHVKSHMRNLNNPHRNILDGDLLLKY 1187

Query: 742  LDLSRTRMDEISKTMNVSVEEL 763
              LS    +E +K +  SV+++
Sbjct: 1188 CHLSVVERNEFAKKIGTSVDQI 1209


>gi|238609081|ref|XP_002397396.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
 gi|215471757|gb|EEB98326.1| hypothetical protein MPER_02189 [Moniliophthora perniciosa FA553]
          Length = 180

 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 6/156 (3%)

Query: 33  NLGPIVDFCVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWS 90
           +L PI+D  V++ L      Q+    G     SLR +R+G+ + E  S EL GI   +W+
Sbjct: 29  SLCPILDSKVLNILPNSDTPQIFAVCGRGARSSLRTLRHGLEVEESVSSELPGIPNAVWT 88

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
            +   DDPFD+++++SF++ T +L++   + +EE +  GF S   TL       + L+QV
Sbjct: 89  TKKREDDPFDSYIILSFVNGTLVLSIG--ETIEEVQDTGFLSSAPTLAVQQIGADALLQV 146

Query: 151 TSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQ 186
             G +R V + SR   NEW+ P G S+  AT N  Q
Sbjct: 147 HPGGIRHVLADSRV--NEWRVPTGKSIVAATTNKRQ 180


>gi|402579535|gb|EJW73487.1| hypothetical protein WUBG_15606 [Wuchereria bancrofti]
          Length = 254

 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 19/236 (8%)

Query: 95  TDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS 154
           T D FD+ +VVSF++ T +L++   + +EE    GF   T TL C     + L+QV    
Sbjct: 9   TLDKFDSHIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDG 66

Query: 155 VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTE-VKHA 212
           +R + +  R   NEWK+P   ++     N  QV +A  GG LVY E+   G L E  +  
Sbjct: 67  IRHIRADRRV--NEWKAPGKRTIMKCALNRRQVAIALAGGELVYFELDVTGQLNEYTERR 124

Query: 213 QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPD---LNLITKEHLGGEIIPR 269
           +L  ++ C+ ++ I E    S+   VG+  D +VRI SL     L+ ++ + L  E  P 
Sbjct: 125 ELPADVLCMSLSEIPEGELRSRFLTVGL-ADKTVRIISLDPQDCLSPLSMQALPSE--PE 181

Query: 270 SVLLCAFEGIS-------YLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL 318
           S+++    G         +L   L +G LL   ++  TGELTD +   LGT+ + L
Sbjct: 182 SIIVLEMFGTEIQSASTVHLNIGLQNGCLLRTTVDQVTGELTDNRTRYLGTKSVKL 237


>gi|322700233|gb|EFY91989.1| Pre-mRNA-splicing factor rse-1 [Metarhizium acridum CQMa 102]
          Length = 1039

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 8/227 (3%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI- 85
           ++E   ++ P++D  ++    +   Q+    G     +LRI+R+G+ +NE  + EL G  
Sbjct: 412 LVESVSSMAPLMDCKILTQAGEDISQIYAACGNGARSTLRILRHGLEVNELVASELPGTP 471

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
             +W+ + +  D +D +++++F+ +T +L++   + + +    GF +   TL       N
Sbjct: 472 SAVWTTKLTQSDDYDAYIILTFLHDTMVLSVG--ETVTQVTDSGFITTVATLAVQQIGKN 529

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG-DG 204
            L QV S  +R + S       EW  P   ++  A  N  QV +A   G +VY E+  DG
Sbjct: 530 SLFQVYSKGIRHIQSGQ---FTEWPVPQHRTIVAAATNERQVAIALSSGEIVYFEVDEDG 586

Query: 205 ILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL 251
            L E    +    ++ L + P+ E    S   AVG   D +VRI SL
Sbjct: 587 SLAEFDERKEIGSVTSLGLGPVPEGRLRSPFLAVGC-DDCTVRILSL 632



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 163/339 (48%), Gaps = 25/339 (7%)

Query: 448  LDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IVEDGK-LQLIA 503
            L+  E G S     F S D   +  +GT   ++    + ++G I V+   +DG+ L+ I 
Sbjct: 704  LEGNEAGVSAAVVPFTSQDGESFLIIGTGKDMIVNPRQSSEGFIHVYRFHDDGRSLEFIH 763

Query: 504  EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 563
            + + +    +L +F+G+LLA I + +++Y   +R    R+ Q++     HI++L  Q++G
Sbjct: 764  KTKVEEPPTALLSFHGRLLAGIGKTLRIYDLGMRQ-LLRKAQADISPQ-HIVSL--QSQG 819

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR 623
              IVVGD+   +++++Y      +     D  A W + + + D +   G +   N++ VR
Sbjct: 820  FRIVVGDVQHGVTMVVYNPVSNKLLPFVDDTIARWTTCLAMADYESVAGGDKFGNIWIVR 879

Query: 624  --KNSEGATDEERGRLEVV-GEYHLGEFVNRFRHGS--LVMRLPDS------DVGQIPTV 672
                +    DE    +++  G+ +L    +R +  +   V  +P S       VG    +
Sbjct: 880  CPDKASAEADEPGSDVQLSNGQSYLHGAAHRLQLMAHMFVQDIPTSICKTSLVVGGQDVL 939

Query: 673  IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
            ++  + G IGV+  L   E   F + L+ ++R     + G +H  +R ++     V  K 
Sbjct: 940  LWSGLQGTIGVLIPLVTRETADFFQTLEMHMRNEDPPLAGRDHLMYRGYH-----VPVKG 994

Query: 732  FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +DGDL E F  LSR +   I+  ++ SV E+ +R+ ++
Sbjct: 995  VIDGDLCERFSLLSREKKQMIAGELDRSVREVERRISDV 1033


>gi|222628488|gb|EEE60620.1| hypothetical protein OsJ_14038 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 33/353 (9%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 493
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL  E+   +GR+L+F   
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL-GEDVAARGRVLLFSFT 1153

Query: 494  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
              +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 1208

Query: 551  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
               +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 1209 DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 1268

Query: 611  LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 1269 LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 1322

Query: 665  DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
             +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 1323 GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 1382

Query: 721  --NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
              N +       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1383 HSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1435



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 21/141 (14%)

Query: 15  NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 64
           +L+   K SY+ V +  +N+GP+ DF            +   +Q   ++V CSG  K+GS
Sbjct: 499 SLESAQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 65  LRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMN 117
           L +++  I  +    VEL   +G+W++       + + D+ +  +L++S   E R + + 
Sbjct: 558 LSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISL--ENRTMVLE 615

Query: 118 LEDELEE-TEIEGFCSQTQTL 137
             D+L E TE   +  Q  T+
Sbjct: 616 TGDDLGEVTETVDYFVQASTI 636


>gi|397615212|gb|EJK63291.1| hypothetical protein THAOC_16062, partial [Thalassiosira oceanica]
          Length = 322

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 41/305 (13%)

Query: 489 ILVFIVEDGKLQLIAEKETK------GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
           +L  +V   +LQL+   +        G V +L  F G+LL  I + ++LY+      G R
Sbjct: 29  VLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEM-----GKR 83

Query: 543 ELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
           +L  +C   G   +   +Q  GD   VGD+M+S+  + Y      +   ARD +A  ++ 
Sbjct: 84  QLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITC 143

Query: 602 VEILDDDIYLGAENNFNLFTV---RKNSEGATD-------------EERGRLEVVGEYHL 645
            E+LD +     +   N+ T+   R    GA D             +   +LE +  YH+
Sbjct: 144 QELLDVNTVAVGDKFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPKLETLCTYHV 203

Query: 646 GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK 704
           GE V      SLV        G   ++I+ TV G IG +      E   F   L++++R 
Sbjct: 204 GEVVTSLTRASLV-------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRS 256

Query: 705 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
            +    G + + +RSF         K+ +DGDL E++  L     + I+  M  S  E+ 
Sbjct: 257 EVPRPTGRDPQSYRSFY-----CPVKHVIDGDLCEAYGGLPYEARERIADQMERSTGEVM 311

Query: 765 KRVEE 769
           K++E+
Sbjct: 312 KKLED 316


>gi|9794908|gb|AAF98388.1| cleavage and polyadenylation specificity factor [Drosophila
           melanogaster]
          Length = 813

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 201/435 (46%), Gaps = 62/435 (14%)

Query: 392 IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEES-EMHFVR---- 433
           +R +PL   PR++ +  ++R + + +              +++  +EES +  F+     
Sbjct: 384 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRDERFIYPIGS 443

Query: 434 -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
                L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 444 QFEMVLISPETWEIVPDASITFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 502

Query: 482 NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
           +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 503 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 561

Query: 531 LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
            Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 562 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 617

Query: 591 ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
           +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 618 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYHL 675

Query: 646 GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
           G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 676 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 734

Query: 701 NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 735 VLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGT 794

Query: 759 SVEELCKRVEELTRL 773
             EE+   + E+ RL
Sbjct: 795 RTEEILGDLLEIERL 809


>gi|422294117|gb|EKU21417.1| uv-damaged dna-binding protein [Nannochloropsis gaditana CCMP526]
          Length = 192

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 4/106 (3%)

Query: 653 RHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
           R G  V R    D+G    ++FGT  G+IG I  +  E Y F   L   L KV+KGVGGL
Sbjct: 29  RSGGEVARGHVQDLG----LMFGTQQGMIGSILPISEEDYRFFVALTKCLNKVVKGVGGL 84

Query: 713 NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
           +HE++R F  +K   D + F+DGDLIESFL+L   RM+E+ + M V
Sbjct: 85  SHEEYRRFLTDKAISDTQGFVDGDLIESFLELPTQRMEEVVELMRV 130


>gi|402588688|gb|EJW82621.1| splicing factor 3b [Wuchereria bancrofti]
          Length = 601

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 41  CVVD-LERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDP 98
           C++D L  +   Q+ T  G     +++++RNG+ + E A  EL G    +W+++ + DD 
Sbjct: 425 CMIDDLANEDSPQIYTLVGRGALSAVKVLRNGLEVTEMAVSELPGNPNAVWTVKRNIDDK 484

Query: 99  FDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 158
           FD+ +VVSF++ T +L++   + +EE    GF   T TL C     + L+QV    +R +
Sbjct: 485 FDSHIVVSFVNATLVLSIG--ETVEEVTDSGFLGTTPTLGCALIGDDALLQVYPDGIRHI 542

Query: 159 SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
            +  R   NEWK+P   ++     N  QV +A  GG LVY E+
Sbjct: 543 RADRRV--NEWKAPGKRTIMKCALNRRQVAIALAGGELVYFEL 583


>gi|297722899|ref|NP_001173813.1| Os04g0252200 [Oryza sativa Japonica Group]
 gi|255675253|dbj|BAH92541.1| Os04g0252200, partial [Oryza sativa Japonica Group]
          Length = 432

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 159/353 (45%), Gaps = 33/353 (9%)

Query: 440 FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 493
           +E  ST P+  FE   ++    L  + + ++     +GTAYVL E+    +GR+L+F   
Sbjct: 86  WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVLGED-VAARGRVLLFSFT 144

Query: 494 VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
             +    L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +
Sbjct: 145 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GAELTAVAFY 199

Query: 551 HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
              +  + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   
Sbjct: 200 DAPLHVVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGST 259

Query: 611 LG-----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
           L      ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP  
Sbjct: 260 LSLVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQ 313

Query: 665 DVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF 720
            +    T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F
Sbjct: 314 GLSSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQF 373

Query: 721 NNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
           ++  K       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 374 HSNGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 426


>gi|330932624|ref|XP_003303845.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
 gi|311319874|gb|EFQ88052.1| hypothetical protein PTT_16226 [Pyrenophora teres f. teres 0-1]
          Length = 1247

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 183/436 (41%), Gaps = 37/436 (8%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL-QGI 85
            +E   +L PI+   V +   +   QV T +G     S R  RN + + +     L Q  
Sbjct: 404 AVESMPSLNPIMGMEVANPALEDAPQVYTINGTSGRSSFRTTRNALEVLDLIESPLPQNA 463

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
             +W+ + +++D  DT +V+     +R L + + D++EE    GF   T TL       +
Sbjct: 464 SDVWTTKLTSEDEADTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDTNTLGVQQFGED 521

Query: 146 QLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
            ++Q+    +R +         +  +     +W  P   ++     N  QV +A   G +
Sbjct: 522 CIIQIHPKGIRHIQGIQFPNDDAGATHANLMDWHPPAHRTIVACATNNRQVAIALSSGQI 581

Query: 197 VYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PD 253
           +Y E   DG L   +    L+  I+CL +  + E    +   AVG  +D +VRIF+L PD
Sbjct: 582 LYFECDSDGSLAMAEEEISLDSTINCLAMPDVPEGSVRAFFLAVGC-SDQTVRIFNLSPD 640

Query: 254 L--NLITKEHLGGEIIPRSVLLCAF------EGIS-YLLCALGDGHLLNFLLNMKTGELT 304
           +  N++    +     P S L           G S +L   L  G  +  +L+  TG++ 
Sbjct: 641 MDGNILRSISVQALTSPPSDLTINLMTDRSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIG 700

Query: 305 DRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKK--LLYSNVNLKEVSHMCPF 362
           D ++  LG +PI     +      + A + RP + Y+  +   L  + +N         F
Sbjct: 701 DTRRRFLGPEPIKFAKVTVAGEPGILAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNF 760

Query: 363 NSAAFPDSLAIAKEGELTIGTIDDI------QKLHIRSIP---LGEHPRRICHQEQSRTF 413
           + + F   + ++   EL I T +D+      + + +R  P   +G H + + +  QS   
Sbjct: 761 DGSQFKGIICVSAN-ELRIFTFNDLTDNTTYENISLRYTPRKMVGYHDQGVFYVIQSDNN 819

Query: 414 AICSLKNQSCAEESEM 429
            I + + Q    ++ M
Sbjct: 820 TISADRRQQLIAQANM 835



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 33/287 (11%)

Query: 493  IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECG 549
            I  DG+ L+L  E        +L AF GKL+A + + + LY     D G + L  +++  
Sbjct: 954  ISPDGRELELFNETAVSEPPLALLAFKGKLIAGVGRHLCLY-----DCGMKSLLRKAQAP 1008

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDD 607
            +      + ++T+G  +VV D  +S++  ++K +     +     D  +   SA E+LD 
Sbjct: 1009 NSVPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSISRHTSASEMLDY 1068

Query: 608  DIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            D  +G +   N++ VR   + SE + +   G   +V + +LG   NR     L+     +
Sbjct: 1069 DTTIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTN 1125

Query: 665  DV-----------GQIPTVIFGTVNGVIG-VIASLPHEQYLFLEKLQTNLRKVIKGVGGL 712
            D+           G    + +  + G +G +I       +   ++L+ +LR   K + G 
Sbjct: 1126 DIPVSIQKANLISGGDKVIFWAGLQGTLGALIPFTSRRNHKLFQQLELSLRSEDKPLSGR 1185

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            +H  +RS+    K+V     +DGDLIE +L LSR + + I+  M  S
Sbjct: 1186 DHLTYRSYYAPVKSV-----IDGDLIERYLVLSRDKRESIAAQMTGS 1227


>gi|242075246|ref|XP_002447559.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
 gi|241938742|gb|EES11887.1| hypothetical protein SORBIDRAFT_06g003570 [Sorghum bicolor]
          Length = 389

 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 33/340 (9%)

Query: 445 TYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILV--FIVEDGK 498
           T P+ +FE   ++    L  + + ++     +GTAYV   E+   +GR+L+  F   +  
Sbjct: 48  TIPMQSFENALTVRIVTLQNTSTKENETLMAIGTAYV-QGEDVAARGRVLLYSFSRSENS 106

Query: 499 LQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHIL 555
             L+ E   KE+KGAV ++ +  G LL A   KI L KW        EL +   +   + 
Sbjct: 107 QNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWT-----GSELTAVAFYDAPLH 161

Query: 556 ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG--- 612
            + +    +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   L    
Sbjct: 162 VVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCFATEFLIDGSTLSLVV 221

Query: 613 --AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
             ++ N  +F     +    +  +G +L    E+H+G  V++F     +  LP   +   
Sbjct: 222 SDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHVSKFLR---LQMLPTQGLASE 275

Query: 670 PT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNE 723
            T    ++FGT++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  N +
Sbjct: 276 KTNRFALVFGTLDGGIGCIAPVDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRHFKSNGK 335

Query: 724 KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
                  N +D +L+  +  LS     EI++ +  +  ++
Sbjct: 336 AHRPGPDNIIDFELLSHYEMLSLEEQLEIAQQIGTTRSQI 375


>gi|195334368|ref|XP_002033855.1| GM20208 [Drosophila sechellia]
 gi|194125825|gb|EDW47868.1| GM20208 [Drosophila sechellia]
          Length = 1455

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 480
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 481  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 590  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 645  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1435

Query: 758  VSVEELCKRVEELTRL 773
               EE+   + E+ RL
Sbjct: 1436 TRTEEILGDLLEIERL 1451



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N +      S EL G   +W++      +SS +D  D F+ +S  + T +L      E+ 
Sbjct: 545 NCLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMFLSQRNSTLVLQTG--QEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|24653655|ref|NP_725397.1| cleavage and polyadenylation specificity factor 160, isoform B
            [Drosophila melanogaster]
 gi|15292103|gb|AAK93320.1| LD38533p [Drosophila melanogaster]
 gi|21627189|gb|AAM68553.1| cleavage and polyadenylation specificity factor 160, isoform B
            [Drosophila melanogaster]
          Length = 1420

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 991  VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1050

Query: 434  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 480
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1051 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1108

Query: 481  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1109 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1168

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1169 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1223

Query: 590  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1224 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYH 1281

Query: 645  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1282 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1340

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1341 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1400

Query: 758  VSVEELCKRVEELTRL 773
               EE+   + E+ RL
Sbjct: 1401 TRTEEILGDLLEIERL 1416



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 450 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 509

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 510 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 566

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 567 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 605


>gi|260835071|ref|XP_002612533.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
 gi|229297910|gb|EEN68542.1| hypothetical protein BRAFLDRAFT_120973 [Branchiostoma floridae]
          Length = 1003

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 198/470 (42%), Gaps = 82/470 (17%)

Query: 356 VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDD----IQKLHIRSIPLGEHPRRICHQEQS 410
           V+   PF++   P   L   + GEL I  +           +R +PL   P  + +  + 
Sbjct: 560 VTCFSPFHNVNCPKGFLYFNRGGELRISVLPTHLSYDAPWPVRKVPLRCTPHFVAYHMEC 619

Query: 411 RTFAICSLKNQSC---------------AEESEMHFVRLLDDQTFEFISTYPLDT----- 450
           + +A+ +   + C                E+ + +   +LD    + +S    +      
Sbjct: 620 KVYAVAASTFEMCNRIPRMAGDEKEYDAVEKDDRYIYPMLDKFNIQLMSPVSWEIIPNTR 679

Query: 451 ---FEYGCSILSCSFSDDSN-VYYCVGTAYVL------PEENEPTKGRILVFIVEDGKLQ 500
               E   +  +CSF    N V +  G   +L      PE  +P         +   K++
Sbjct: 680 GMQLEENYAECTCSFLVGINFVLFVAGQIVILDVIEVVPEPGQP---------LTKNKIK 730

Query: 501 LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILAL 557
            +  KE KG V +L   NG LL+AI QKI L  W  R++   G   + ++   H  I   
Sbjct: 731 ELYGKEQKGPVSALCGCNGYLLSAIGQKIFL--WEFRNNDLIGVAFIDTQVYIHTAI--- 785

Query: 558 YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG----- 612
              +  +++++ D+ KSISLL Y+           D        VE   D+  +G     
Sbjct: 786 ---SIKNYVILADVFKSISLLRYQ-----------DMRPLETYCVEFFVDNAQIGFLVSD 831

Query: 613 AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF-RHGSLVM-----RLPDSD- 665
           A+ NF L++ +  +  +   +R  L    ++++G  VN F R    +M     R  D+D 
Sbjct: 832 AQKNFLLYSYQPEARESYGGQR--LVRRADFNVGSHVNTFFRVRCKIMDPSGERRRDADT 889

Query: 666 VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-NNEK 724
           V +    +F T++G +G +  +  + Y  L  LQ  L   +    GLN + +R   +N +
Sbjct: 890 VAKRHVTMFATLDGGLGALLPMAEKTYRRLLMLQNTLMTHMPFPAGLNPKAFRMLKHNHR 949

Query: 725 KTVDA-KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             ++A +N LDG+L+  FL LS     E+++ +  S E + + + ++ RL
Sbjct: 950 SLINACRNILDGELLWKFLHLSVVERSELARKIGTSPETITEDLMDIDRL 999


>gi|45552619|ref|NP_995833.1| cleavage and polyadenylation specificity factor 160, isoform A
            [Drosophila melanogaster]
 gi|18203551|sp|Q9V726.1|CPSF1_DROME RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=CPSF 160 kDa subunit;
            Short=dCPSF 160
 gi|7303176|gb|AAF58240.1| cleavage and polyadenylation specificity factor 160, isoform A
            [Drosophila melanogaster]
          Length = 1455

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 64/436 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 480
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 481  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 590  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNIIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 645  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
              L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K + 
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIG 1435

Query: 758  VSVEELCKRVEELTRL 773
               EE+   + E+ RL
Sbjct: 1436 TRTEEILGDLLEIERL 1451



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|397627714|gb|EJK68584.1| hypothetical protein THAOC_10223, partial [Thalassiosira oceanica]
          Length = 456

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 41/305 (13%)

Query: 489 ILVFIVEDGKLQLIAEKETK------GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
           +L  +V   +LQL+   +        G V +L  F G+LL  I + ++LY+      G R
Sbjct: 163 VLYRVVSGERLQLLHRTKVDDGSSGGGPVLALVHFQGRLLVGIGKSLRLYEM-----GKR 217

Query: 543 ELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
           +L  +C   G   +   +Q  GD   VGD+M+S+  + Y      +   ARD +A  ++ 
Sbjct: 218 QLLKKCELRGLPTMVKTLQAAGDRAFVGDMMQSMQFVRYDATANRLVLVARDRSARPITC 277

Query: 602 VEILDDDIYLGAENNFNLFTV---RKNSEGATD-------------EERGRLEVVGEYHL 645
            E+LD +     +   N+ T+   R    GA D             +   +LE +  YH+
Sbjct: 278 QELLDVNTVAVGDKFGNVTTLRLPRGADTGAVDVSGTRALWDSSREDATPKLETLCTYHV 337

Query: 646 GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRK 704
           GE V      SLV        G   ++I+ TV G IG +      E   F   L++++R 
Sbjct: 338 GEVVTSLTRASLV-------AGGAESLIYVTVTGRIGALVPFTSREDVEFYTSLESHVRS 390

Query: 705 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
            +    G + + +RSF         K+ +DGDL E++  L     + I+  M  S  E+ 
Sbjct: 391 EVPRPTGRDPQSYRSFY-----CPVKHVIDGDLCEAYGGLPYEARERIADQMERSTGEVM 445

Query: 765 KRVEE 769
           K++E+
Sbjct: 446 KKLED 450


>gi|147860990|emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+D  VVD   +   Q+  C G   +GSLRI+R+GI + +  + +   QGI G W+
Sbjct: 503 NIAPILDMSVVDCHDEEHDQMFACCGVTPEGSLRIIRSGISVEKLLRTAPIYQGITGTWT 562

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           ++    D + +FLV+SF+ ETR+L++ L    + T+  GF     TL C       LVQ+
Sbjct: 563 VKMKVIDSYHSFLVLSFVEETRVLSVGLSFT-DVTDSVGFQPDVSTLACGVVDDGLLVQI 621

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
               V+L   T          +  +   W  P   S+++     + +++AT     +++ 
Sbjct: 622 HKNGVKLCLPTTVAHPEGIPLASPICTSW-FPENISISLGAVGYNLIVVATSSPCFLFIL 680

Query: 201 IGDGI------LTEVKHAQLEYEISCLDI 223
               +      + E++H +L+ E+SC+ I
Sbjct: 681 GVRSVSAYQYEIYEMQHVRLQNEVSCISI 709



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            +G  P+ L   S      + A SDRP ++ S+   L Y++++ +  +H+ P  S   P  
Sbjct: 882  IGITPVFLVPLSDSLEADIIALSDRPWLLQSARHSLSYTSISFQPSTHVTPVCSMECPMG 941

Query: 371  LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMH 430
            +    E  L +  +   ++L+++   LG  PR++ +  +SR   +        ++++   
Sbjct: 942  ILFVAENSLHLVEMVHSKRLNVQKFYLGGTPRKVLYHSESRLLLV---MRTELSQDTYSS 998

Query: 431  FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS----NVYYCVGTAYVLPEENEPTK 486
             +  +D  +   +S++ L+  E G S+      ++           G A +   E E TK
Sbjct: 999  DICCVDPLSGSVLSSFKLELGETGKSMELVRVVNEQVLVIGTSLSSGPAMMPSGEAESTK 1058

Query: 487  GRILVFIVE 495
            GR++V  +E
Sbjct: 1059 GRLIVLCLE 1067


>gi|193702313|ref|XP_001945086.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Acyrthosiphon pisum]
          Length = 1335

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 43/334 (12%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF 517
            Y  +GT Y    E+  ++GRI +F + D            K+++I  KE KG V ++   
Sbjct: 1010 YIAMGTNYSY-SEDITSRGRIFLFDIIDVVPEPGKPLTKNKIKMIYAKEQKGPVTAITHV 1068

Query: 518  NGKLLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
             G L+ A+ QKI  Y W L+D+   G   + +E   H  +L++        I+V DL KS
Sbjct: 1069 VGFLVTAVGQKI--YIWQLKDNDLIGIAFIDTEVYVH-QMLSI-----KSLILVADLFKS 1120

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATD 631
            I+LL ++ E   +    RD     +  +  L D+    +L ++ + NL            
Sbjct: 1121 ITLLRFQEEYRTLSLVCRDSKPLEVFDINFLIDNTELGFLASDRDQNLLLYLYQPMARES 1180

Query: 632  EERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG----------QIPTVIFGTVNGVI 681
                 L   G++++G  VN F      +R   S V           +    ++ T++G I
Sbjct: 1181 YGGQHLVRRGDFNIGSNVNSF----FRLRCKQSTVAPDRREAIGSDKRHVTMYTTLDGSI 1236

Query: 682  GVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIE 739
            G I  +  + Y  L  LQ  L K I  + GLN + +RSF     ++   A+  +DG+L+ 
Sbjct: 1237 GYIVPIHEKNYRRLLTLQNMLVKNITHLAGLNPKAYRSFKATAPERMNQARRVIDGELVW 1296

Query: 740  SFLDLSRTRM-DEISKTMNVSVEELCKRVEELTR 772
             F+     R  +EI+  + V   EL + + EL R
Sbjct: 1297 MFVTCMNARQRNEIANKVGVKTIELLQDIYELDR 1330



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVSFISET 111
           +++  SG  K+G+L ++   I      +  L G K MW++    D  F TF++++ +  T
Sbjct: 460 ELLCTSGHGKNGALSVLHRSIKPQLVTTFHLDGYKDMWTVHGEND--FHTFMILTNVDST 517

Query: 112 RILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN---E 168
            IL      E+ E +  G+ ++  T+F  + +   ++QV   SVRL++  S +L++   +
Sbjct: 518 LILQTG--QEINELDSSGYATREHTVFVCN-MNKFVIQVLRYSVRLLNG-SEQLQSVSLD 573

Query: 169 WKSPPGYSVNVATANASQVLLATGGGHLV 197
           + SP    ++ ++ N   VLL   G  +V
Sbjct: 574 FGSP---IIHGSSCNPYAVLLTEDGQVIV 599


>gi|195485994|ref|XP_002091320.1| GE12310 [Drosophila yakuba]
 gi|194177421|gb|EDW91032.1| GE12310 [Drosophila yakuba]
          Length = 1455

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASISFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 646  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 1376

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 1377 VLLSYQEHLCGLNPKEYRTLKSFKKQGINPSRCVIDGDLIWSYRLMANSERNEVAKKIGT 1436

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ RL
Sbjct: 1437 RTEEILADLLEIERL 1451



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGATLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      +SS +D  D F+++S  + T  L +    E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNST--LVLQTGQEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|428182571|gb|EKX51431.1| hypothetical protein GUITHDRAFT_134365 [Guillardia theta CCMP2712]
          Length = 1295

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 197/475 (41%), Gaps = 78/475 (16%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQ---VVTCSGAYKDGSLRIVRNGIGINEQASVE 81
           +E LER   LG   DF V+  +    G    V+ CSG  K  S+R +R G+ +      E
Sbjct: 455 IETLERLTMLGVTTDFTVLSDKNVNGGDEFDVLVCSGTGKHASIRRLRYGLPVETHVRSE 514

Query: 82  ---LQGIKGMWSLRSSTDDPFD-TFLVVSFISETRILAMNLEDELEE-TEIEGFCSQTQT 136
                GI G++++  + +   D +FL ++F +  R+L +    EL + T+  G      T
Sbjct: 515 KGLCDGIVGLYTI--TFEQKHDQSFLFMAFTTGCRVLTVG--SELSDVTDDLGLNPTALT 570

Query: 137 LFCHDAIYNQLVQVTSGSVRLVSS------------TSRELRNEWKSPPGYSVNVATANA 184
           L         L+QV+   V ++               S+  R  W+      ++V+ +  
Sbjct: 571 LHAAANSDGHLIQVSDEEVIVIQQPVLDSMDLDVIPCSQPERAVWRPAESTKISVSASLG 630

Query: 185 SQVLLATGGGHLVYL-----EIGDG----ILTEVKHAQLEYEISCLDINPIGENPSYS-Q 234
           + V+  T GG  +++     + G      I  E+   +   E+SC+ +  +G + S + +
Sbjct: 631 NLVMCCTCGGTSIHILDTTRDQGSAGEFQIRGEITSFRSSEEVSCMAMTSLGAHGSETRK 690

Query: 235 IAAVGMWTDI------SVRIFSLP------------DLNLITKEHLGGEIIPRSVLLCAF 276
           I+ +G + D        ++I+SL             DL + +   L G +     +L   
Sbjct: 691 ISIIGTYADALKARAGKIKIYSLGEEKREVELAQSIDLGIYSGSDLSGSVPQSFGILPEP 750

Query: 277 EGISYLLCALGDGHLLNFLLNMKTGEL----TDRKKVSLGTQPITLRTFSSKNTTHVFA- 331
            G  +L+  L +G ++ F LN  +  L    T R+   L   PIT  + +S     + A 
Sbjct: 751 AGGVFLVVGLRNGKVIIFTLNALSLPLVGLGTTRR---LAESPITFVSITSYAGPSLIAL 807

Query: 332 ASDRPTVIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQK 389
             D   ++  S   L +  +  +   +SH  PF   A P  +AI  +G+L + +ID  +K
Sbjct: 808 VEDVAFLVTPSRASLQFQRIGFQPGGISHAAPFICDACPLGMAIVVDGQLKLVSIDRCEK 867

Query: 390 LHIRSIPLG---EH------------PRRIC-HQEQSRTFAICSLKNQSCAEESE 428
           L +++IPL    EH            P R+  H +       C+   + C  E E
Sbjct: 868 LDVKTIPLALESEHTESESKLEDNFMPARVVWHPDAKLVIVGCNYSRKVCGAEEE 922


>gi|320169222|gb|EFW46121.1| cleavage and polyadenylation specificity factor 1 [Capsaspora
            owczarzaki ATCC 30864]
          Length = 1725

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 116/495 (23%), Positives = 206/495 (41%), Gaps = 70/495 (14%)

Query: 329  VFAASDRPT-VIYSSNKKLLYSNVNLKE--VSHMCPFNSAAFPDSLA-IAKEGELTI--- 381
            VF    RP  ++ S  +K L +++ L +  VS    FN+ A P        +G L     
Sbjct: 1227 VFVCGRRPLWLLMSPTRKALRAHLMLTDGSVSAFSAFNNNACPGGFVYFTTQGTLRFCQL 1286

Query: 382  -GTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS----------------------- 417
              T +      +R +PL      I + E  RT+ + +                       
Sbjct: 1287 APTTNHDNPWPVRRVPLRATAHYIGYHEVFRTYVLVTSHPKPYFNLPRLTNDETYTPVPY 1346

Query: 418  -LKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYC 471
              K ++     +   ++L+   T+E I ++ L  FE   S+   + +    V     Y  
Sbjct: 1347 TPKPRAIPATFDTFSLQLISPVTWESIHSFDLPAFERVTSVDIAAITSQETVTGLKDYVV 1406

Query: 472  VGTAYVLPEENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGK 520
            +GT  V+  E+    GRI+VF + D            KL+ + E+E KGA+ +L+   G 
Sbjct: 1407 IGTT-VIEGEDVTCHGRIIVFEIIDVVPEVNRPQTNRKLKYLMEREQKGAITALSHVCGH 1465

Query: 521  LLAAINQKIQLYKWMLRD--DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL 578
            L++ I QKI ++++   D  DG   + ++         + V    +FI+VGDL  S+ LL
Sbjct: 1466 LVSCIGQKIIIWQFASDDTMDGVAFIDTQT------FVVSVSAIKNFILVGDLNNSVFLL 1519

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERG 635
             +      +   ARD++   +++ + L D   LG    +++ NL     N          
Sbjct: 1520 RFNETTKHLGFIARDFDHMSVASTQFLVDGSSLGFLATDSHQNLVVFAYNPLNRESNNGQ 1579

Query: 636  RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV-----IFGTVNGVIGVIASLPHE 690
            RL    ++H+G  V +     +V R     V +  +V     +  T+ G +  +A +   
Sbjct: 1580 RLLRQLDFHVGSHVQQVLR--MVPRSLPVSVDRGASVKRHIDLLATLEGSLNALAPIGET 1637

Query: 691  QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTR 748
             +  LE LQ  L   ++   GLN   +R++   +K  T  A N +DG+L+  FL L    
Sbjct: 1638 TFRRLEWLQRQLVG-LQQRAGLNPIGYRAYRFPRKMTTTRAGNVIDGELLSRFLYLGLAE 1696

Query: 749  MDEISKTMNVSVEEL 763
              E+++    + E+L
Sbjct: 1697 QRELARQRRNTPEDL 1711


>gi|268580265|ref|XP_002645115.1| Hypothetical protein CBG16808 [Caenorhabditis briggsae]
 gi|296439546|sp|A8XPU7.1|CPSF1_CAEBR RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
          Length = 1454

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 35/315 (11%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE  +PT  R         K++++ +KE KG V  L A NG LL+ + QK+  + W  
Sbjct: 1153 VVPEPGQPTSNR---------KIKVLYDKEQKGPVTGLCAINGLLLSGMGQKV--FIWQF 1201

Query: 537  RDDGTRELQSECGHHGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            +D+    + S    H ++  L+ ++T     +  D  +S+SL+ ++ E  A+   +RD  
Sbjct: 1202 KDNDLMGI-SFLDMHYYVYQLHSIRT---IALALDARESMSLIRFQEENKAMSIASRDDR 1257

Query: 596  --ANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
              A    A E L D +++G        N  LF+    +  +   E  RL V    ++G  
Sbjct: 1258 KCAQAPMASEFLVDGMHIGFLLSDEHGNITLFSYSPEAPESNGGE--RLTVKAAINIGTN 1315

Query: 649  VNRFRHGSLVMRLPDS-------DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
            +N F        L DS       ++ Q    IFG+++G  G I  L  + Y  L  LQT 
Sbjct: 1316 INAFLRVKGHTSLLDSSSPEERENIEQRMNTIFGSLDGSFGYIRPLTEKSYRRLHFLQTF 1375

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            +  V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V
Sbjct: 1376 IGSVTPQIAGLHIKGARSSKPSQPIVNGRNARNLIDGDVVEQYLHLSVYDKTDLARRLGV 1435

Query: 759  SVEELCKRVEELTRL 773
                +   + +L R+
Sbjct: 1436 GRYHILDDLMQLRRM 1450


>gi|194883064|ref|XP_001975624.1| GG22421 [Drosophila erecta]
 gi|190658811|gb|EDV56024.1| GG22421 [Drosophila erecta]
          Length = 1455

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 62/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFI--STYPLDTFEY--GCSILSCSFSDDSN---VYYCVGTAYVLPEE 481
                 L+  +T+E +  ++   + +E+     I+  S+    +    Y C+GT +    E
Sbjct: 1086 QFEMVLISPETWEIVPDASISFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-SE 1144

Query: 482  NEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQ 530
            +  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI 
Sbjct: 1145 DITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI- 1203

Query: 531  LYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
             Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +   
Sbjct: 1204 -YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSLA 1259

Query: 591  ARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
            +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YHL
Sbjct: 1260 SRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYHL 1317

Query: 646  GEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            G+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ 
Sbjct: 1318 GQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQN 1376

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
             L    + + GLN +++R+  + KK     ++  +DGDLI S+  ++ +  +E++K +  
Sbjct: 1377 VLVSYQEHLCGLNPKEYRTLKSFKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGT 1436

Query: 759  SVEELCKRVEELTRL 773
              EE+   + E+ RL
Sbjct: 1437 RTEEILGDLLEIERL 1451



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQGQG-------------QVVTCSGAYKDGSLRIVR 69
           EV +  +N+ P+   C    V+ E  G               ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPVNYMCAGERVEFEEDGATLRPHAESLQDVKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N I      S EL G   +W++      +SS +D  D F+++S  + T +L      E+ 
Sbjct: 545 NCINPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTG--QEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|395740218|ref|XP_002819588.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Pongo abelii]
          Length = 1388

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 163/368 (44%), Gaps = 46/368 (12%)

Query: 426  ESEMHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVL 478
            + E   ++L+   ++E I  +   L  +E+   + + S   +  V     Y   GT  + 
Sbjct: 1015 QQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQ 1074

Query: 479  PEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
             EE    +GRIL+      + E G      K +++ EKE KG V +L   NG L++AI Q
Sbjct: 1075 GEEVT-CRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQ 1133

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
            KI  + W LR     EL         +    + +  +FI+  D+MKSISLL Y+ E   +
Sbjct: 1134 KI--FLWSLR---ASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTL 1188

Query: 588  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
               +RD     + +V+ + D+  LG   ++ + NL       E        RL    ++H
Sbjct: 1189 SLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFH 1248

Query: 645  LGEFVNRFRHGSLVMRLPDSDVGQ---IPTVIFG--------TVNGVIGVIASLPHEQYL 693
            +G  VN F       R P     +     +V++         +V G IG++  +  + Y 
Sbjct: 1249 VGAHVNTF------WRTPCRGAAEGLSKKSVVWENKHITWLVSVRGGIGLLLPMQEKTYR 1302

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDE 751
             L  LQ  L  ++    GLN   +R  + +++T+    +N LDG+L+  +L LS     E
Sbjct: 1303 RLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSE 1362

Query: 752  ISKTMNVS 759
            ++K +  +
Sbjct: 1363 LAKKIGTT 1370



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 412 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 471

Query: 77  QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 112
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 472 VTTFELPGCYDMWTVIAPLRKEEEDNPKGEGTEQEPSTPEADDDGRRHGFLILSREDSTM 531

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 532 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 576


>gi|189208368|ref|XP_001940517.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187976610|gb|EDU43236.1| pre-mRNA-splicing factor rse1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 1247

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 186/440 (42%), Gaps = 32/440 (7%)

Query: 16  LQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            +P A  ++  V E   +L PI+   V +   +   QV T +G     S R  RN + + 
Sbjct: 394 FKPRALVNFTPV-ESMPSLNPIMGMEVANPALEDAPQVYTINGTSGRSSFRTTRNALEVL 452

Query: 76  EQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           +     L Q    +W+ + ++ D  DT +V+     +R L + + D++EE    GF   T
Sbjct: 453 DLIESPLPQNASDVWTTKLTSGDEADTLIVLCL--HSRTLVLKIGDDVEEASNTGFLPDT 510

Query: 135 QTLFCHDAIYNQLVQVTSGSVRLV---------SSTSRELRNEWKSPPGYSVNVATANAS 185
            TL       + ++Q+    +R +         +  +     +W  P   ++     N  
Sbjct: 511 NTLGVQQFGEDCIIQIHPKGIRHIQGIQFPNDDADATHANLMDWHPPAHRTIVACATNNR 570

Query: 186 QVLLATGGGHLVYLEI-GDGILTEVKHA-QLEYEISCLDINPIGENPSYSQIAAVGMWTD 243
           QV +A   G ++Y E   DG L   +    L+  I+CL +  + E    +   AVG  +D
Sbjct: 571 QVAIALSSGQILYFECDSDGSLAMAEEEISLDSTINCLAMPDVPEGSVRAFFLAVGC-SD 629

Query: 244 ISVRIFSL-PDL--NLITKEHLGGEIIPRSVLLCAF------EGIS-YLLCALGDGHLLN 293
            +VRIF+L PD+  N++    +     P S L   F       G S +L   L  G  + 
Sbjct: 630 QTVRIFNLSPDMDGNILRSISVQALTSPPSDLTINFMKDRSPRGESQFLHIGLRSGVYIR 689

Query: 294 FLLNMKTGELTDRKKVSLGTQPITLRTFSS-KNTTHVFAASDRPTVIYSSNKK--LLYSN 350
            +L+  TG++ D ++  LG +PI     +    +  + A + RP + Y+  +   L  + 
Sbjct: 690 SVLDEMTGDIGDTRRRFLGPEPIKFAKVNDVAGSPGILAMTSRPWLGYTHPRTGVLQLTP 749

Query: 351 VNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSIPLGEHPRRIC-HQE 408
           +N         F+ + F   + ++   EL I T +D+       +I L   PR++  + E
Sbjct: 750 LNYIPFKSAWNFDGSQFKGIICVSTN-ELRIFTFNDLTDNTTYENISLKYTPRKMVGYHE 808

Query: 409 QSRTFAICSLKNQSCAEESE 428
           Q   + I S  N   A+  +
Sbjct: 809 QGVFYVIQSDNNTISADRRQ 828



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 33/287 (11%)

Query: 493  IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL--QSECG 549
            I  DG+ ++L  E        +L AF GKL+A + + + LY     D G + L  +++  
Sbjct: 954  ISPDGREIELFNETAVSEPPLALLAFKGKLIAGVGRHLCLY-----DCGMKSLLRKAQAP 1008

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EGAIEERARDYNANWMSAVEILDD 607
            +      + ++T+G  +VV D  +S++  ++K +     +     D  A   SA E+LD 
Sbjct: 1009 NSVPTRIVDIKTQGSRLVVSDQAQSVTYFVHKDQVHPNRLIPFVDDSVARHTSASEMLDY 1068

Query: 608  DIYLGAENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
            D  +G +   N++ VR   + SE + +   G   +V + +LG   NR     L+     +
Sbjct: 1069 DTTIGGDKFGNIWLVRCPKEISESSDESPDGSDLLVDKSYLGGTPNRL---DLIAHYFTN 1125

Query: 665  DV-----------GQIPTVIFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGL 712
            D+           G    + +  + G +G +      + +   ++L+  LR   K + G 
Sbjct: 1126 DIPVSIQKANLISGGDKVIFWAGLQGTLGALIPFTSRRTHKLFQQLELTLRSEDKPLSGR 1185

Query: 713  NHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            +H  +RS+    K+V     +DGDLIE +L LS  + + I+  M  S
Sbjct: 1186 DHLTYRSYYAPVKSV-----IDGDLIERYLVLSSDKRESIAGQMTGS 1227


>gi|67521912|ref|XP_659017.1| hypothetical protein AN1413.2 [Aspergillus nidulans FGSC A4]
 gi|74598221|sp|Q5BDG7.1|CFT1_EMENI RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|40745387|gb|EAA64543.1| hypothetical protein AN1413.2 [Aspergillus nidulans FGSC A4]
 gi|259486722|tpe|CBF84808.1| TPA: Protein cft1 (Cleavage factor two protein 1)
            [Source:UniProtKB/Swiss-Prot;Acc:Q5BDG7] [Aspergillus
            nidulans FGSC A4]
          Length = 1339

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 192/438 (43%), Gaps = 70/438 (15%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 432
            +R++P+G+   ++ +   S T+ +  C        E+ E+H                  +
Sbjct: 907  MRTVPIGQQIDKLTYVSASDTYVLGTCQRCEFRLPEDDELHPEWRNEEISFLPEVNQSSL 966

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +++  +T+  I +YPL+  E+   + + S     N +       VGT+     E+ P++G
Sbjct: 967  KVVSPKTWSVIDSYPLEPAEHIMVMKTMSLEVSENTHERRDMIVVGTSLAR-GEDIPSRG 1025

Query: 488  RILVF----IVEDG-------KLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKW 534
             I VF    +V D        +L+LI ++  KGAV +L+   G+  L+AA  QK  +   
Sbjct: 1026 CIYVFEVIEVVPDPEQPETNRRLKLIGKEPVKGAVTALSEIGGQGFLIAAQGQKSMVRG- 1084

Query: 535  MLRDDGT----RELQSECGHHGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEE 589
             L++DG+      +  +C      +++  + +G    + GD +K +    Y  E   +  
Sbjct: 1085 -LKEDGSLLPVAFMDMQC-----FVSVIKELKGTGMCIFGDAVKGLWFAGYSEEPYKMSL 1138

Query: 590  RARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
             A+D +   + A + L D      + A+++ NL+ ++ + E        +L    ++H G
Sbjct: 1139 FAKDLDYLEVLAADFLPDGNKLFIVVADSDCNLYVLQYDPEDPNSSNGDKLLNRSKFHTG 1198

Query: 647  EFVN-------------RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL 693
             F +             R   GS  M +   +   +  V+  + NG IG++  +P E Y 
Sbjct: 1199 NFASTVTLLPRTLVSSERAMSGSDKMDI--DNTAPLHQVLVTSHNGSIGLVTCVPEESYR 1256

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
             L  LQ+ L   ++   GLN   +R+  ++      +  LD +L+  +LD+S+ R  EI+
Sbjct: 1257 RLSALQSQLTNTLEHPCGLNPRAYRAVESDASA--GRGMLDSNLLLQYLDMSKQRKAEIA 1314

Query: 754  KTMNVSVEELCKRVEELT 771
              +  +  E+   +E ++
Sbjct: 1315 GRVGATEWEIRADLEAIS 1332


>gi|225455571|ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 37/369 (10%)

Query: 432  VRLLDDQ----TFEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENE 483
            VR+L+ +     ++  +T P+ + E   ++    L  + + ++     +GTAYV   E+ 
Sbjct: 1076 VRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYV-QGEDV 1134

Query: 484  PTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
              +GR+L+F V    D    L++E   KE KGA+ ++ +  G LL A   KI L+KW   
Sbjct: 1135 AARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWT-- 1192

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
              GT            +  + +    +FI++GD+ +SI  L +K +   +   A+D+ + 
Sbjct: 1193 --GTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKDFGSL 1250

Query: 598  WMSAVEILDDDIYLGA-----ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
               A E L D   L       + N  +F    K SE    +   +L    E+H+G  V +
Sbjct: 1251 DCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQ---KLLSRAEFHVGAHVTK 1307

Query: 652  FRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            F    ++    D       SD      ++FGT++G IG IA L    +  L+ LQ  L  
Sbjct: 1308 FLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1367

Query: 705  VIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
             +  V GLN   +R F  N +       N +D +L+  +  L      EI++ +  +  +
Sbjct: 1368 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1427

Query: 763  LCKRVEELT 771
            +   + +L+
Sbjct: 1428 ILSNLNDLS 1436



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 24/112 (21%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V + ++N+GP+ DF              + +Q   ++V CSG  K+G+L I++  I    
Sbjct: 500 VRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEM 559

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRIL 114
              VEL G KG+W++               ++ DD +  +L++S  S T +L
Sbjct: 560 ITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVL 611


>gi|296084122|emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 37/369 (10%)

Query: 432  VRLLDDQ----TFEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENE 483
            VR+L+ +     ++  +T P+ + E   ++    L  + + ++     +GTAYV   E+ 
Sbjct: 1082 VRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYV-QGEDV 1140

Query: 484  PTKGRILVFIV---EDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
              +GR+L+F V    D    L++E   KE KGA+ ++ +  G LL A   KI L+KW   
Sbjct: 1141 AARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIILHKWT-- 1198

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
              GT            +  + +    +FI++GD+ +SI  L +K +   +   A+D+ + 
Sbjct: 1199 --GTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKDFGSL 1256

Query: 598  WMSAVEILDDDIYLGA-----ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
               A E L D   L       + N  +F    K SE    +   +L    E+H+G  V +
Sbjct: 1257 DCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQ---KLLSRAEFHVGAHVTK 1313

Query: 652  FRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
            F    ++    D       SD      ++FGT++G IG IA L    +  L+ LQ  L  
Sbjct: 1314 FLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1373

Query: 705  VIKGVGGLNHEQWRSF--NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
             +  V GLN   +R F  N +       N +D +L+  +  L      EI++ +  +  +
Sbjct: 1374 AVPHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQ 1433

Query: 763  LCKRVEELT 771
            +   + +L+
Sbjct: 1434 ILSNLNDLS 1442



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 24/112 (21%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V + ++N+GP+ DF              + +Q   ++V CSG  K+G+L I++  I    
Sbjct: 506 VRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEM 565

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRIL 114
              VEL G KG+W++               ++ DD +  +L++S  S T +L
Sbjct: 566 ITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVL 617


>gi|357162146|ref|XP_003579318.1| PREDICTED: probable cleavage and polyadenylation specificity factor
            subunit 1-like [Brachypodium distachyon]
          Length = 1442

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 160/350 (45%), Gaps = 27/350 (7%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 493
            +E  ST P+ +FE   ++    L  + + ++     +GTAYV   E+   +GR+L+F   
Sbjct: 1096 WETRSTIPMQSFENALTVRIVTLHNTTTKENETLMAIGTAYV-QGEDVAARGRVLLFSFT 1154

Query: 494  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
              +    L+ E   KE+KGAV ++ +  G L+ A   KI L KW    +G+ EL +   +
Sbjct: 1155 KSENSQNLVTEVYSKESKGAVSAVASLQGHLVIASGPKITLNKW----NGS-ELTAVAFY 1209

Query: 551  HGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
               +  + +    +F++ GD+ KS+  L +K +   +   A+D+ +    A E L D   
Sbjct: 1210 DAPLHVVSLNIVKNFVLFGDIHKSVYFLSWKEQGSQLTLLAKDFGSLDCFATEFLIDGST 1269

Query: 611  LG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVG 667
            L    ++++ NL       +     +  +L    E H+G  + +F     +  LP   + 
Sbjct: 1270 LSLVVSDSDKNLQIFYYAPKMVESWKGQKLLSRAELHVGAHMTKFLR---LQMLPAQGLA 1326

Query: 668  QIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--N 721
               T    ++FGT++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  N
Sbjct: 1327 SEKTNRFALLFGTLDGSIGCIAPVDELTFRRLQSLQRKLVDAVSHVCGLNPRSFRQFKSN 1386

Query: 722  NEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
             +       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1387 GKAHRPGPDNIIDFELLTYYEILSLEEQLDMAQQIGTTRAQILSNFSDIS 1436



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 22/163 (13%)

Query: 15  NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 64
           +L+   K SYV V +  VN+GP+ DF                +Q   ++V CSG  K+G+
Sbjct: 498 SLESAQKISYV-VRDALVNVGPLKDFSYGLRVNADPNATGNAKQSNYELVCCSGHGKNGA 556

Query: 65  LRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMN 117
           L +++  I  +    VEL   +G+W++        ++ D+ +  +L++S   E+R + + 
Sbjct: 557 LSVLQQSIRPDLITEVELPSCRGIWTVYYKSSRGHTTEDNEYHAYLIISL--ESRTMVLE 614

Query: 118 LEDELEE-TEIEGFCSQTQTLFCHDAI-YNQLVQVTSGSVRLV 158
             D+L E TE   +  Q  T+   +     +++QV +   R++
Sbjct: 615 TGDDLGEVTETVDYYVQGATITAGNLFGRRRVIQVYATGARVL 657


>gi|221055487|ref|XP_002258882.1| CPSF (cleavage and polyadenylation specific factor), subunit A
            [Plasmodium knowlesi strain H]
 gi|193808952|emb|CAQ39655.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium knowlesi strain H]
          Length = 2478

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 220/539 (40%), Gaps = 96/539 (17%)

Query: 303  LTDRKKVSLGTQ-PITLRTFS----------------SKNTTHVFAASDRPTVIYSS-NK 344
            LT R+K+S  T+ P+  +TF                 SK    +F   D P +IYS+  K
Sbjct: 1907 LTKRRKISTCTKSPVKFKTFLKVNSEKNLIDINMSKLSKKCNFLFVCCDNPIIIYSTLKK 1966

Query: 345  KLLYSNVNLKEV---------SHMCPF-NSAAFP-----DSLAIAKEG-ELTIGTIDDIQ 388
            K+  S ++++ V         +++ PF N  +F      +S  I  +G +L I  +++++
Sbjct: 1967 KISTSKLSIRNVLLVDMFSDFNYLNPFHNFLSFKKKNQNNSYFIFFDGHKLCISYLNEMK 2026

Query: 389  KLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYP 447
            K  +  IP      +I  H +       C ++ +    +     V   D     F  TY 
Sbjct: 2027 KTFMERIPFHRTVEKIAYHADTGLLITACPVEEKHKTNQMMKQIVCFFDPFQNSFKYTYI 2086

Query: 448  LDTFEYGCSI----LSCSFS-------DDSN-----------------VYYCVGTAYVLP 479
            + +     SI    L+ S S       D  N                    CVGTA    
Sbjct: 2087 IPSKFSVSSICIYELASSHSLVADHSVDQMNQVNHPNNKDGALNPPVHTLICVGTANNNE 2146

Query: 480  EENEPTKGRILVFIVEDGKLQ-----LIAEKETKGAVYSLNAFNGKLLAAINQKIQLY-- 532
               EP+ G I VF+ +    Q     +       G +  L  F  K++AA+N  + +   
Sbjct: 2147 RITEPSSGHIYVFVAKKKTNQFEIKHIYTYNVNCGGITHLKQFRDKIVAAVNNTVLILDI 2206

Query: 533  KWMLRDDGT------RELQSECGHHGHILALYVQTR--------GDFIVVGDLMKSISLL 578
            +  L + GT      + ++ E       +A +  +          ++IVVGD+M S++LL
Sbjct: 2207 RNFLTNLGTYIYNASKAMKVESNDAFLEVASFTPSSWIMSLDVVKNYIVVGDIMTSVTLL 2266

Query: 579  IYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLE 638
             Y  E   + E  RDY   W +A   L +D +L ++   N   ++K++    DEE  +L 
Sbjct: 2267 SYDFENAILNEVCRDYANIWCTA---LSEDHFLVSDMESNFLVLQKSNIKFNDEESFKLS 2323

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVI-----GVIASL-PHEQY 692
            +V +++ G  VN+    SL   + + +  + P  I      ++     G I++L P   +
Sbjct: 2324 LVSQFNHGSVVNKMLSTSLRNLVDEYESEERPNEIVQKERSILCASSEGSISTLIPFSNF 2383

Query: 693  LFLEK---LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTR 748
            +  ++   ++  +   I  +G L+H  +R +     + + K  +DG+L + F  L   R
Sbjct: 2384 IQFKRALCIEIAINDNISSLGNLSHSSYREYKITLASKNCKGVVDGELFKMFFYLPFER 2442



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 24  YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
           ++E+L    N+GPI+DFCVV   +  + +++TC+   + G + I+RNG+ ++  + + + 
Sbjct: 829 FIEILSVIQNMGPILDFCVVK-NKNEEKEIITCNSYGRTGCISIIRNGMKVDIISKLNIG 887

Query: 84  GIKGMWSLR 92
            I  M+ ++
Sbjct: 888 KITNMFVVK 896


>gi|291232722|ref|XP_002736302.1| PREDICTED: cleavage and polyadenylation specific factor 1-like
           [Saccoglossus kowalevskii]
          Length = 984

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 208/500 (41%), Gaps = 97/500 (19%)

Query: 329 VFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAIAKEGELTIGTID 385
           VF     P  ++ +++  L S+    + S  C  PF++   P   L   K GEL I  + 
Sbjct: 523 VFVCGPYPHWLFMTSRGALRSHPMHIDGSVTCFAPFHNINCPKGFLYFNKHGELRICVLP 582

Query: 386 DIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------------ES 427
                     +R +PL   P  I +  +S+T+A+ +  ++ C                E 
Sbjct: 583 THLSYDALWPVRKVPLRCTPHFISYHIESKTYAVVTSVSEPCLRICKMTGDDKEFEDVER 642

Query: 428 EMHFV---------RLLDDQTFEFISTYPLDT--FEYGCSILSCSFSDDSNV-----YYC 471
           +  F+         +L    ++E I    +DT  +E+   + +     +  V     +  
Sbjct: 643 DDRFIFPTIEKFSLQLFSPLSWEAIPNTKIDTEDWEHITGLKTVFLKSEGTVSGLKGFIA 702

Query: 472 VGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGK 520
           V T  V  EE    +GRIL+F     + E G      KL+L+ +KE KG V +L    G 
Sbjct: 703 VSTTIVYGEEVT-CRGRILIFDVIEVVPEPGQPLTKNKLKLLYDKEQKGPVTTLCDIEGL 761

Query: 521 LLAAINQKIQLYKWMLRDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
           L AAI QKI L  W  R++   G   + ++   H H L     T  +FI+  D+ KS+SL
Sbjct: 762 LAAAIGQKIFL--WAFRNNDLIGVAFIDTQI--HIHTLC----TIKNFILAADIRKSVSL 813

Query: 578 LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR-KNSEGATDE-ERG 635
           L +  E+ ++    R+          +L    +    +  + F +R K S+ AT++   G
Sbjct: 814 LRFSDEDRSLSLVTRES----FGGQRLLRRADFNAGSHVCSFFRMRSKLSDPATEKLLTG 869

Query: 636 RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL 695
            +E              RH                  +F T++G IG +  +  + Y  L
Sbjct: 870 PMER-------------RH----------------VTMFATLDGSIGYLIPMTEKTYRRL 900

Query: 696 EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEIS 753
             LQ  L        GLN + +R   ++ K+++   KN LDGDL+  +  LS     E++
Sbjct: 901 LMLQNALTTQTLHTAGLNPKGFRMVKHQTKSLENTHKNILDGDLLWKYTFLSVNERTELA 960

Query: 754 KTMNVSVEELCKRVEELTRL 773
           K +  SVE++   + ++ RL
Sbjct: 961 KKIGTSVEQILDDLMDVERL 980


>gi|405977622|gb|EKC42064.1| Cleavage and polyadenylation specificity factor subunit 1
            [Crassostrea gigas]
          Length = 1369

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 144/329 (43%), Gaps = 32/329 (9%)

Query: 469  YYCVGTAYVLPEENEPTKGRILV-----FIVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  +GT   L EE   ++GR+++      + E G      K++ + EKE KG V +L   
Sbjct: 1045 YIVMGTNLSLGEEVT-SRGRVIIADIIEVVPEPGMPLTKHKIKTLYEKEQKGPVTALADI 1103

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            NG L+ AI QK  LY W L+D+   +L        HI    + T    I+ GD++KS+S+
Sbjct: 1104 NGLLITAIGQK--LYIWQLKDN---DLMGVAFIDTHIYIHTLVTIKHIILAGDILKSVSV 1158

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEER 634
              Y+ E   +   +RD     +   + L D+  L    ++   NL       E       
Sbjct: 1159 YQYQEEHKVLSIVSRDPRPLEVYTADFLIDNTQLCCLVSDRMKNLVVYSYQPEARESHGG 1218

Query: 635  GRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD--VGQIP----TVIFGTVNGVIGVIASLP 688
             RL    +++ G  V+        +  P SD  +   P       F T++G +G +  L 
Sbjct: 1219 QRLIRKADFNAGSNVSSMFRVRCKLYDPSSDKRMTGAPEKRHITYFATLDGSLGFVLPLS 1278

Query: 689  HEQYLFLEKLQTNLRKVIKGVGGLNHEQWR----SFNNEKKTVDAKNFLDGDLIESFLDL 744
             + Y  L  LQ  L   I  V GLN   +R    +F   +     KN LDG+L+  + +L
Sbjct: 1279 EKVYRRLFMLQNALVTHIPHVAGLNPRSYRHVIGTFPELRNP--QKNILDGELLWKYTNL 1336

Query: 745  SRTRMDEISKTMNVSVEELCKRVEELTRL 773
            S     EI+K +  S +++   + E+ RL
Sbjct: 1337 SIMEKIEIAKRLGTSNDQIMDDLMEIDRL 1365



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS------------STDDPF 99
           ++V  SG  K+G+L +++  I      + EL G   MW+++S            S +D  
Sbjct: 436 EMVMTSGYGKNGALSVLQRSIRPQVVTTFELPGCLDMWTVKSLVPKEKSEDKENSMEDDS 495

Query: 100 D-------TFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVT 151
           D       +FL++S    + IL      E+ E +  GF +QT T+F  +   ++ +VQV+
Sbjct: 496 DDNIEGGHSFLILSRSDSSMILETG--QEMNELDHSGFSTQTTTIFAGNIGGDRYIVQVS 553

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 198
             S+RL+    R++++         V  + A+   VLL   G  L++
Sbjct: 554 DTSLRLLEGV-RQIQHIPLDTGSPVVQCSLADPYIVLLTQEGQILMF 599


>gi|313232279|emb|CBY09388.1| unnamed protein product [Oikopleura dioica]
          Length = 1451

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 171/373 (45%), Gaps = 40/373 (10%)

Query: 431  FVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENE 483
            FV +    ++E I  S   +D  E+     S     ++++     Y  +GT+ +  E+ +
Sbjct: 1083 FVEMFSPASWEVIPNSRIEMDAHEHILCCRSVYLKSEASMSGRKQYIAIGTSNICGEDFQ 1142

Query: 484  PTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLY 532
             ++GR+++  V D            K + + +   +G V ++++ +G L+AAI QK+ ++
Sbjct: 1143 -SRGRLILLEVIDVVPEPGKPLTRYKYKTVFDASQRGPVSAVDSLDGALIAAIGQKVFIH 1201

Query: 533  KWM---LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
             +    LR  G  + Q    H  H    Y        +VGD+ + I+LL ++ E   I +
Sbjct: 1202 AFQDDNLRATGFVDTQLYT-HATHCFKNYA-------LVGDIQQGITLLRHQGERNCISQ 1253

Query: 590  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVR---KNSEGATDEERGRLEVVG 641
             +R   A  ++AV IL D   +G      + N  ++  +   K S G     R     +G
Sbjct: 1254 ISRARRAGEVTAVGILLDGNQVGLVSTDMQRNLQVYMYKPDQKESNGGKQLVRQADINLG 1313

Query: 642  EYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
            +  +  + +  R      ++  ++        +  ++G IG I  +  + +  LE LQT 
Sbjct: 1314 KRVISIWNSLGRQNDTFTKVALTENDARHVTFYAGLDGSIGDIVPVSEKVFRRLEMLQTL 1373

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            ++  +   GGLN  ++R   NE + ++  AKN +DGDL+E F  LS T   ++S+ + V+
Sbjct: 1374 VQSHLPHYGGLNPREYRYCTNEYRDLENAAKNIIDGDLLERFNGLSFTEQTDLSRKIGVT 1433

Query: 760  VEELCKRVEELTR 772
             E L   + ++ R
Sbjct: 1434 REALLDDMMDVQR 1446


>gi|294889072|ref|XP_002772683.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
 gi|239877121|gb|EER04499.1| spliceosomal protein sap, putative [Perkinsus marinus ATCC 50983]
          Length = 229

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGI-KGMWSLR---------SSTDDPFDT 101
           Q+   SG     +LRI+R+G+ + E  + EL G    +++++         +  +   D 
Sbjct: 34  QIYALSGRGPRSALRILRHGLTLGEAGASELPGQPNALFTIKPFGASYAPVAEGEVESDR 93

Query: 102 FLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSST 161
           ++VVSF+ +T  L +   D + E    GF  +  TLF         +QV    +R V++ 
Sbjct: 94  YIVVSFVDQTLTLLVT-SDNIHEVTDSGFAKEQPTLFAMRMQDKSAIQVMPTGIRHVAAG 152

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIG---DGILTEVKHAQLEYEI 218
            R    EW++PPG  V +A +N SQV++A  GG +   E+    +G L+EV    +  E+
Sbjct: 153 RRT--TEWRAPPGRQVTMAASNGSQVVIALSGGEIQLFELDADTNGHLSEVAKRDIGCEV 210

Query: 219 SCLDINPIGENPSYSQIAA 237
           + L + P+    + SQ  A
Sbjct: 211 AALTVQPLSSGRTRSQFMA 229


>gi|156097003|ref|XP_001614535.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148803409|gb|EDL44808.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 2558

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 119/565 (21%), Positives = 226/565 (40%), Gaps = 110/565 (19%)

Query: 290  HLLNFLLNMKTGELTDRKKVSLGTQ-PITLRTF----SSKNTTHV------------FAA 332
            +L ++++  K   LT R+K+S  T  P+  + F    S +N   V            F  
Sbjct: 1962 YLKSYVVKSKKIMLTKRRKISTCTNSPVKFKAFLKVHSERNQIDVNMSKLTKRCNFLFVC 2021

Query: 333  SDRPTVIYSS-NKKLLYSNVNLKEV---------SHMCPFNSAAF------PDSLAIAKE 376
             D P +IYS+  KKL  S ++++ V         +++ PF++          +S  I  +
Sbjct: 2022 CDSPIIIYSTLKKKLSISKLSIRNVHLVDMFSDFNYLNPFHNFLLFKKKNQNNSYFIFFD 2081

Query: 377  G-ELTIGTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRL 434
            G +L I  +++++K  +  IP      +I  H +       C ++ +    +     V  
Sbjct: 2082 GNQLCISYLNEMKKTFMERIPFHRTVEKIAYHADTGLLITACPVEEKHKTNQMMKQIVCF 2141

Query: 435  LD--DQTFEF------------ISTYPLDTFEYGCSI--------------------LSC 460
             D    +F++            I  Y L     G S+                    L  
Sbjct: 2142 FDPFQNSFKYTYIIPSKFSVSSICIYELAPSSGGASMGEMEQTSQMGQMEQTNQTNELKP 2201

Query: 461  SFSDDSN------VYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ-----LIAEKETKG 509
            S  ++           CVGTA       EP+ G I VF+ +    Q     +     + G
Sbjct: 2202 SHPEERTDAPPVRTLICVGTANNNERITEPSSGHIYVFVAKKQTNQFEIKHVYTYNVSCG 2261

Query: 510  AVYSLNAFNGKLLAAINQKI----------QLYKWMLRDDGTRELQSECGH--------H 551
             +  L  F  K++AA+N  +           L  ++       +++S             
Sbjct: 2262 GITHLKQFRDKIVAAVNNTVVILDIGNFLANLGAYIYNSSKAIKIESNDAFLEVASFTPS 2321

Query: 552  GHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYL 611
              I++L V    ++IVVGD+M S++LL Y  E   + E  RDY   W ++V  L ++ +L
Sbjct: 2322 SWIMSLDVVE--NYIVVGDIMTSVTLLSYDFENAILNEVCRDYANIWCTSVSALSENHFL 2379

Query: 612  GAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD-----V 666
             ++   N   ++K++    DEE  +L +V +++ G  VN+    SL   + D +     +
Sbjct: 2380 VSDMESNFLVLQKSNIKFNDEESFKLSLVSQFNHGSVVNKMFSTSLRNLVDDEERRNEIL 2439

Query: 667  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEK---LQTNLRKVIKGVGGLNHEQWRSFNNE 723
             +  +++  +  G I  +  +P   +L  ++   ++  +   I  +G L+H  +R +   
Sbjct: 2440 QKEQSILCASSEGSISAL--IPFSNFLQFKRALCIEIAINDNISSLGNLSHSSYREYKVS 2497

Query: 724  KKTVDAKNFLDGDLIESFLDLSRTR 748
              + + K  +DG+L + F  L   R
Sbjct: 2498 LASKNCKGVVDGELFKMFFYLPFER 2522



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 24  YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQ 83
           ++E+L    N+GPI+DFCVV   + G+ +++TC+   + G + I+RNG+ +N  + + L 
Sbjct: 822 FIEILAVIQNMGPILDFCVVK-NKNGEKEIITCNSYGRTGCISIIRNGMKVNIISKLSLG 880

Query: 84  GIKGMWSLR 92
            I  M+ ++
Sbjct: 881 KITNMFVVK 889


>gi|71028348|ref|XP_763817.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350771|gb|EAN31534.1| hypothetical protein TP04_0182 [Theileria parva]
          Length = 1231

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 34/335 (10%)

Query: 9   KQLIKLNLQPDAKGSYVE----------VLERYVNLGPIVDFCVVDLERQGQGQVVTCSG 58
           K +I  +L PDAK + +           V++R  ++   VD  VVD+       +    G
Sbjct: 371 KDVICTSLHPDAKNAIIAFKPRKLQNLAVVDRMNSMALAVDMKVVDVLGLNNYDIFVACG 430

Query: 59  AYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMN 117
            + D  L+ +R G    E A  EL G  K +++++S  +  +D ++++SF   T +L++ 
Sbjct: 431 RWYDSRLKCLRYGFNTEELAFNELPGRPKAVFTIKS-LESNYDEYIIISFQGNTLVLSIG 489

Query: 118 LEDELEETEIEGFCSQTQTLF-CHDAIYNQ------LVQVTSGSVRLVSSTSRELRNEWK 170
             + +EE     F +   TL  CH    +        VQV  G  R ++    ++  EWK
Sbjct: 490 --EAVEEVTDSFFLTSITTLHSCHMGSTSGSVGGGIFVQVHDGGFRYLTG---DVVKEWK 544

Query: 171 SPPGYSVNVATANASQVLLATGGGHLVYLEIGDGI---LTEVKHAQLEYEISCLDI-NPI 226
                 V +A  N +Q++L   GG ++Y ++ +     L EV    L  E++CL + + +
Sbjct: 545 VQTTKRVKLADNNNTQLVLVLTGGEVIYFQLTEADVLELVEVGRRNLSTEVTCLAVQHQV 604

Query: 227 GENPSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSV-LLCAFEGISYLLC 284
             N   ++    G   +I VR+  L   L L + + LG   +P SV LL       YL  
Sbjct: 605 SGNK--AEFCCCGSIDNI-VRVMKLDKTLKLCSSQILGNNSLPESVALLTTSVDELYLYV 661

Query: 285 ALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            L +G L+   +++  G L+D++   LG +P+ L+
Sbjct: 662 GLNNGVLIRNTVDV-AGNLSDQESRFLGAKPLRLK 695



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 34/283 (12%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLY----KWMLRDDGTRELQSECGHHGH 553
            ++L+    TKG +   N +  KLL  AI  K+++Y    K ML     R L S    +G 
Sbjct: 967  IKLLHVTNTKGWIRCFNNYENKLLLCAIGSKLRMYALGRKQMLLKGEHRSLTS----NGF 1022

Query: 554  ILALYVQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
               + ++  G  I  GD+ +S+ LL    Y  + G  E         W+S +E+LD    
Sbjct: 1023 ---MDIKVVGSRIYCGDIRESVQLLRLKFYGEDLGEFELTTTSTGPRWLSTMELLDYSTV 1079

Query: 611  LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP 670
            +  +   +LF  R       +E+  R     EYH     N+F  G +V  L    +  I 
Sbjct: 1080 IAGDKFDSLFVSRV----PHNEDVVRSNYF-EYH-----NQFHLGDIVTSLQRVRINPIH 1129

Query: 671  T--VIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            +  V++ T+ G IGV+     +  L FL+ L+  L   I  V G   + +RS+       
Sbjct: 1130 SEVVLYTTLMGSIGVLIPFVSKDELDFLQHLEMLLCNQIDTVTGREVQMFRSY-----YF 1184

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              +N +DGDL E F  L   + + ++  +N+ V E+ K+++ +
Sbjct: 1185 PVQNIVDGDLCEMFTALGDEKFN-VANQLNLKVAEVVKKLKNI 1226


>gi|154419018|ref|XP_001582526.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
 gi|121916762|gb|EAY21540.1| CPSF A subunit region family protein [Trichomonas vaginalis G3]
          Length = 1142

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 154/757 (20%), Positives = 308/757 (40%), Gaps = 78/757 (10%)

Query: 51   GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDP---FDTFLVVSF 107
            G +++  G++   SL+I R G+       +E+ G  G   +++   DP   +DTF+ VS 
Sbjct: 413  GDIISIHGSFNKSSLKITRKGMPTKVLKPIEIGG--GCTFVKAVKKDPLNEYDTFIFVSN 470

Query: 108  ISETRILAMNLED-ELEETEIEGFCSQTQTL--FCHDAIYN--QLVQVTSGSVRLVSSTS 162
             S TRI     E  EL++++   F +  +T+  F   A  N   L Q+T+  +R+++   
Sbjct: 471  ESTTRIFEFFEETRELKDSKESLFVTDKKTIDVFFLPAFNNTSSLAQITTEGMRIINDKE 530

Query: 163  RELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGIL----TEVKHAQLEYEI 218
            +   ++WK      +   TAN SQ+ +      +V  E  +  L    +  K  ++  +I
Sbjct: 531  K---HDWKRDESSKIICVTANPSQIAIVYDDNQIVLFETDETSLPKEVSSNKVMEIAGQI 587

Query: 219  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITK--EHLGGEIIPRSVLLCAF 276
            + + +        Y +  AV    D  + I  + +++  T+       +I+ ++V+   F
Sbjct: 588  TSIALPQPQTGVRYVEWLAVSAVND-GLSIVYIVNISKTTEMWSVSSRQILDKTVISMMF 646

Query: 277  ---EGISYLL-CALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAA 332
                GI  +L     +G L    L+   G L +     LG  P+T      KN   +   
Sbjct: 647  LFVPGIGNILHIGHNEGLLTRTNLDDSNGSLDNATLKFLGNAPVTFSRCEVKNQNSILIN 706

Query: 333  SDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS--LAIAKEGELTIGTIDDIQKL 390
               P       K L    ++       C + +  F D   + +     +   T D    +
Sbjct: 707  CASPWY----TKGLSLVQLSSSPFVSCCQYKAPFFIDDSFIGLTTNNMVLFYTPDKNILI 762

Query: 391  HIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDT 450
              +++ L   PR+I H   ++   +C L +     + +    +L++    E IS+ PL  
Sbjct: 763  DTQTLDLDMTPRQIVHIPNTK--FVCVLMSDLIKGKWKSQ-AKLVNYD--ELISSEPLQL 817

Query: 451  FEYGCSILSCSFSDDSNVYYCVGTAY-VLPEENEPTKGRILVFIVEDGKLQLIAEKETKG 509
             +      +C   + + V  CV       P+  +   G++L+  +  G  +++   +   
Sbjct: 818  DDNLLVSAACYLENYNLVAVCVAKNLSFFPKRCD--GGQVLLLDIGSGIPKVVQSTDFDD 875

Query: 510  AVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVG 569
               ++  F   ++  + + + +    L+   T+ L+  C         Y++  G  I+ G
Sbjct: 876  IPQAIAPFGEYVILGVQETLMV----LKVGRTKLLKKCCSKAFPHCINYLKAFGTRIIAG 931

Query: 570  DLMKSISLLIYKHEEGAIEERARDY-NANWMSAVEILDDDIYLGAENNFNLFTVRK---- 624
            D M+S   + +  EE  +   A D    + +SA+ +    +  G  + F  F + +    
Sbjct: 932  DAMESFHFVKFDKEEDILSIFADDMVPRHPLSAIGLDRSTVCCG--DKFGSFCILRLPPD 989

Query: 625  -NSEGATDEE--------------RGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
             N +   D                + ++E+   YH+G  +         + L   D    
Sbjct: 990  INDDAEIDPSDVGHAFENEKFPGAKNKVELSNMYHIGSPITG-------LCLSQGDFENT 1042

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKL-QTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
             ++++GTV+G IG+   L  +    L +L +  ++K+IK   G   EQ+RS+    K V+
Sbjct: 1043 -SIVYGTVDGEIGLFIPLKTDTDARLFRLLEDEMKKLIKSPVGRFIEQFRSYYTPLKCVN 1101

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
                 D +L+ S++DL      EI++ + V   +L +
Sbjct: 1102 -----DSNLLLSYIDLPTNLQKEIAEKLKVKPFDLSR 1133


>gi|66361481|ref|XP_627314.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
 gi|46228697|gb|EAK89567.1| possible spliceosome factor [Cryptosporidium parvum Iowa II]
          Length = 1317

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 158/373 (42%), Gaps = 42/373 (11%)

Query: 29  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKG 87
           E  ++L PI D  V+D    G  Q+V   G     +LR+   G  + E A   L G  + 
Sbjct: 394 EEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYGKNVEEIAENPLPGRPRC 453

Query: 88  MWSLRSSTD-------------DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           +W+L++  D             D    ++++SFI   R L + + + +EET    F    
Sbjct: 454 IWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFID--RSLVLTIGEHVEETNDTLFTLNE 511

Query: 135 QTLFCHDAI-YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGG 193
            T++    I YN  +QV    V+L+    ++   +WK+P    +  A +N  QV LA  G
Sbjct: 512 TTMYAASMIFYNSFLQVLETHVKLI---IQDRIYDWKTPDSRKIIAADSNGRQVSLALEG 568

Query: 194 GHLVYLEI-----------GDGILTEVKHAQLEYEISCLDINPIGENPSY-SQIAAVGMW 241
           G +V LE+           G G L EV   ++  EI C+ I  +  +    S    VG  
Sbjct: 569 GLIVILELNVNGVSGITNTGMGGLVEVCRREITCEIICIGIQQLSYSGQMRSDYVVVGTS 628

Query: 242 TDISVRIFSLPDLNLITKEHL-----GGEIIPRSVLLCAFEGISYLLCALG--DGHLLNF 294
           T+ ++R++ +       K+           IP +V L       +L+  +G   G +L+ 
Sbjct: 629 TENALRLYKIDSAEKRLKQTCTQILPNSNSIPENVQLYHSNKYGHLILFVGLTTGVILSC 688

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKN---TTHVFAASDRPTVIYSSNKKLLYSNV 351
            ++   G ++D +   LG + + +     ++      +   S RP ++ S    + ++ +
Sbjct: 689 KVDASNGSISDPRSKYLGNRGVNICRIMREDFGGEMSLVCMSSRPWLVDSQTSGVNFTPL 748

Query: 352 NLKEVSHMCPFNS 364
             + +  + P N+
Sbjct: 749 QYRCIDSIAPLNT 761



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 68/390 (17%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP------------ 479
            VR+++ ++ E I   PLDT E   S   C F +       +GT Y +             
Sbjct: 947  VRIVNLKSMETIQLIPLDTNEGCISACVCKFDELDLPCLVLGTVYGMKLNRGYNNNNSNN 1006

Query: 480  ---------EENEPTKGRILVFIVEDGK--LQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
                     +EN  + G  +     D     +L+     + +  +L  + G+LL  IN+ 
Sbjct: 1007 STDSAKNNDKENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINKT 1066

Query: 529  IQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            +++Y    K +LR    R +             +++   D I  GD+   + +  + +  
Sbjct: 1067 LRVYSLGKKRLLRKSEYRNIPQGL--------TWIKVVNDRIFAGDISNGVLVFKFNNTS 1118

Query: 585  GAIEERARDYNANWM-SAVEILD----------DDIYLG-----AENNFNL---FTVRKN 625
                  A+D    W+ SA E+LD          D+I +      A ++F+    FT   N
Sbjct: 1119 NQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPAEASDDFSFVTSFTDNNN 1178

Query: 626  SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIA 685
            S+ +      ++  V ++HLG+ V   +   L    P S       +I+GTV G IG ++
Sbjct: 1179 SQSSALMRTHQINTVAQFHLGDIVTCLQKSQLT---PTS----AEAIIYGTVLGSIGSLS 1231

Query: 686  S-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDL 744
              L +E    L KL+  LRK    +   +H  +RS+ +        N +DGD  ++F  L
Sbjct: 1232 PILNNEDIELLSKLEILLRKQKSTLLSRDHLMFRSYYSP-----VHNVIDGDFCQTFTIL 1286

Query: 745  SRTRMDEISKTMNVSVEELCKRVEEL-TRL 773
                  EI+  ++V+VEE+ K++++  TRL
Sbjct: 1287 DSQIQSEIASKLDVTVEEIYKKLDDYKTRL 1316


>gi|341892673|gb|EGT48608.1| CBN-CPSF-1 protein [Caenorhabditis brenneri]
          Length = 1440

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 28/311 (9%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE  +PT  R         K++++ +KE KG V  L A  G LL+ + QK+  + W  
Sbjct: 1140 VVPEPGQPTSNR---------KIKVLFDKEQKGPVTGLCAMEGLLLSGMGQKV--FIWQF 1188

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN- 595
            +D+    L S    H ++  L+  +     +  D  +S+SL+ ++ E  A+   +RD   
Sbjct: 1189 KDNDLMGL-SFLDMHYYVYQLH--SLRSIALACDARESMSLIRFQEENKAMSVASRDDRK 1245

Query: 596  -ANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR 651
             A    A + + D  ++G   ++ N N+       E        RL V    ++G  +N 
Sbjct: 1246 CAQAPMAAQFMVDGAHIGFLLSDENGNITLFNYAPEAPESNGGERLTVRAAINIGTNINA 1305

Query: 652  F----RHGSLV--MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            F     H +L+           Q  + IF +++G  G I  L  + Y  L  LQT +  V
Sbjct: 1306 FLRVKGHTALLNLHEFEKEAAEQRMSTIFASLDGSFGFIRPLTEKSYRRLHFLQTFIGSV 1365

Query: 706  IKGVGGLNHEQWRSFNNEKKTVD---AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
             + + GL+ +  RS    +  V+   A+N +DGD++E +L+LS     ++++ + V    
Sbjct: 1366 SQQIAGLHIKGARSAKPPQPIVNGRNARNLIDGDVVEQYLNLSTYDKTDLARRLGVGKYH 1425

Query: 763  LCKRVEELTRL 773
            +   + EL R+
Sbjct: 1426 IIDDLMELRRM 1436


>gi|119484094|ref|XP_001261950.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Neosartorya fischeri NRRL 181]
 gi|148886830|sp|A1DB13.1|CFT1_NEOFI RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|119410106|gb|EAW20053.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Neosartorya fischeri NRRL 181]
          Length = 1400

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 160/371 (43%), Gaps = 37/371 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 486
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1027 LKVVSPRTWTVIDSYSLGPAEYVMAVKNMDLEVSENTHERRNMIVVGTAFAW-GEDIPSR 1085

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1086 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1145

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  +         ++GD +K +    Y  E   +    +D
Sbjct: 1146 --LKEDGSLLPVAFMDMQCYVNVVKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1203

Query: 594  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1204 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1263

Query: 651  RFRHGSLVM-----RLPDSDVGQIPT------VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                    M      + D D  +I +      V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1264 TMTLLPRTMVSSEKAMADPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1323

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1324 SQLTNSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1381

Query: 760  VEELCKRVEEL 770
              E+   +E +
Sbjct: 1382 EWEIKADLEAI 1392


>gi|67600754|ref|XP_666354.1| CG13900 gene product [Cryptosporidium hominis TU502]
 gi|54657334|gb|EAL36124.1| CG13900 gene product [Cryptosporidium hominis]
          Length = 1318

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 158/373 (42%), Gaps = 42/373 (11%)

Query: 29  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKG 87
           E  ++L PI D  V+D    G  Q+V   G     +LR+   G  + E A   L G  + 
Sbjct: 394 EEILSLSPITDIKVIDTNNDGTPQIVATCGRGPRSTLRVCSYGKNVEEIAENPLPGRPRC 453

Query: 88  MWSLRSSTD-------------DPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQT 134
           +W+L++  D             D    ++++SFI   R L + + + +EET    F    
Sbjct: 454 IWTLKNGIDPSLSGSQAEAAILDNIHHYIIISFID--RSLVLTIGEHVEETNDTLFTLNE 511

Query: 135 QTLFCHDAI-YNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGG 193
            T++    I YN  +QV    V+L+    ++   +WK+P    +  A +N  QV LA  G
Sbjct: 512 TTMYAASMIFYNSFLQVLETHVKLI---IQDRIYDWKTPDSRKIIAADSNGRQVSLALEG 568

Query: 194 GHLVYLEI-----------GDGILTEVKHAQLEYEISCLDINPIGENPSY-SQIAAVGMW 241
           G +V LE+           G G L EV   ++  EI C+ I  +  +    S    VG  
Sbjct: 569 GLIVILELNVNGVSGITNTGIGGLVEVCRREITCEIICIGIQQLSYSGQMRSDYVVVGTS 628

Query: 242 TDISVRIFSLPDLNLITKEHL-----GGEIIPRSVLLCAFEGISYLLCALG--DGHLLNF 294
           T+ ++R++ +       K+           IP +V L       +L+  +G   G +L+ 
Sbjct: 629 TENALRLYKIDSAEKRLKQTCTQILPNSNSIPENVQLYHSNKYGHLILFVGLTTGVILSC 688

Query: 295 LLNMKTGELTDRKKVSLGTQPITLRTFSSKN---TTHVFAASDRPTVIYSSNKKLLYSNV 351
            ++   G ++D +   LG + + +     ++      +   S RP ++ S    + ++ +
Sbjct: 689 KVDASNGSISDPRSKYLGNRGVNICRIMREDFGGEMSLVCMSSRPWLVDSQTSGVNFTPL 748

Query: 352 NLKEVSHMCPFNS 364
             + +  + P N+
Sbjct: 749 QYRCIDSIAPLNT 761



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 69/391 (17%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLP------------ 479
            VR+++ ++ E I   PLDT E   S   C F +       +GT Y +             
Sbjct: 947  VRIVNLKSMETIQLIPLDTNEGCISACVCKFDELDLPCLVLGTVYGMKLNRGYNNNNNSN 1006

Query: 480  ----------EENEPTKGRILVFIVEDGK--LQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
                      +EN  + G  +     D     +L+     + +  +L  + G+LL  IN+
Sbjct: 1007 NNTDSAKNNDKENHDSFGAAIKIFKYDSNYNFELVHITPIENSATALTGWRGRLLVGINK 1066

Query: 528  KIQLY----KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
             +++Y    K +LR    R +             +++   D I  GD+   + +  + + 
Sbjct: 1067 TLRVYSLGKKRLLRKSEYRNIPQGL--------TWIKVVNDRIFAGDISNGVLVFKFNNT 1118

Query: 584  EGAIEERARDYNANWM-SAVEILD----------DDIYLG-----AENNFNL---FTVRK 624
                   A+D    W+ SA E+LD          D+I +      A ++F+    FT   
Sbjct: 1119 SNQFILVAKDPMPRWLTSACEVLDYHTIAVSDKFDNIIVSRVPVEASDDFSFVTSFTDNN 1178

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVI 684
            NS+ +      ++  V ++HLG+ V   +   L    P S       +I+GTV G IG +
Sbjct: 1179 NSQSSALMRTHQINTVAQFHLGDIVTCLQKSQLT---PTS----AEAIIYGTVLGSIGSL 1231

Query: 685  AS-LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLD 743
            +  L +E    L KL+  LRK    +   +H  +RS+ +        N +DGD  ++F  
Sbjct: 1232 SPILNNEDIELLSKLEILLRKQKSTLLSRDHLMFRSYYSP-----VHNVIDGDFCQTFTI 1286

Query: 744  LSRTRMDEISKTMNVSVEELCKRVEEL-TRL 773
            L      EI+  ++V+VEE+ K++++  TRL
Sbjct: 1287 LDSKIQSEIASKLDVTVEEIYKKLDDYKTRL 1317


>gi|154342093|ref|XP_001566998.1| putative CPSF-domain protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|134064323|emb|CAM40524.1| putative CPSF-domain protein [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1347

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 185/465 (39%), Gaps = 101/465 (21%)

Query: 375  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF--- 431
            ++G L IG+++ ++K     +PLGE   ++        +A+   K     E  E+ F   
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETVTQLHETAAWGGYAVAVRK----VEGDEVLFLPS 853

Query: 432  ------------------VRLLDDQTFEFISTYPLDTFEYG-----C-------SILSCS 461
                              V LL+++   F+ T  LD  E G     C       +I S  
Sbjct: 854  SVIQSPWTADLGLWRTAAVPLLENERCVFLQTVRLDGSEGGGPAERCGEQIDVPAITSAG 913

Query: 462  FSD-DSNVYYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYS--- 513
             S+ D      VG+++  P+E     GR++ F + +     +L+LIA K+  GA+     
Sbjct: 914  VSEEDWQHLLLVGSSFTFPDEQRARSGRVMWFALHEERQGQRLRLIASKDIGGALQCCAE 973

Query: 514  LNAFNGKLLAAINQKIQLYKWMLRDDG-------------TR--ELQSECGHHGHILALY 558
            +  + G++   +N  + LYKW   D               TR   L +       ++AL 
Sbjct: 974  VPYYKGRIALGVNGCVCLYKWNTEDQTFVAEERCRVGLTVTRLIPLYNTALAASVLVALD 1033

Query: 559  VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFN 618
            V+    FI V  L  S+ +L     EG +      Y  +    + + DD++   A     
Sbjct: 1034 VRHSAFFIEVDLLQGSLKVLC---REGNLRGVMDGYVGSDAENLCLFDDNLNFTALKVVP 1090

Query: 619  LFT---VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLPDSDVGQI-- 669
            L         +  A+   + R EV  +YH+G+ V   R GS     +M+ P         
Sbjct: 1091 LPVEPGDGDAAAAASGTPQCRFEVRAQYHVGDLVTCVRPGSFAATSLMKAPTPSSSVPSP 1150

Query: 670  --------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 718
                    P ++F T +G  GV+  L    YL L  L+ +L + +  +GGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPLHAATYLVLRALEASLERTLPPLGGLSHQAFREVL 1210

Query: 719  -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLS 745
                             +   E+ +  ++ N +DGD++E FL LS
Sbjct: 1211 RAGQERGVSYLASKVGCALTRERLRRYESLNTVDGDMVEQFLWLS 1255


>gi|25148482|ref|NP_500157.2| Protein CPSF-1 [Caenorhabditis elegans]
 gi|22096347|sp|Q9N4C2.2|CPSF1_CAEEL RecName: Full=Probable cleavage and polyadenylation specificity
            factor subunit 1; AltName: Full=Cleavage and
            polyadenylation specificity factor 160 kDa subunit;
            Short=CPSF 160 kDa subunit
 gi|373220398|emb|CCD73182.1| Protein CPSF-1 [Caenorhabditis elegans]
          Length = 1454

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 146/312 (46%), Gaps = 29/312 (9%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++PT  R         K++++ +KE KG V  L A NG LL  + QK+  + W  
Sbjct: 1153 VVPEPDQPTSNR---------KIKVLFDKEQKGPVTGLCAINGLLLCGMGQKV--FIWQF 1201

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN- 595
            +D+    + S    H ++  L+  +     +  D  +S+SL+ ++ +  A+   +RD   
Sbjct: 1202 KDNDLMGI-SFLDMHYYVYQLH--SLRTIAIACDARESMSLIRFQEDNKAMSIASRDDRK 1258

Query: 596  -ANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN- 650
             A    A +++ D  ++G   ++   N+       E        RL V    ++G  +N 
Sbjct: 1259 CAQPPMASQLVVDGAHVGFLLSDETGNITMFNYAPEAPESNGGERLTVRAAINIGTNINA 1318

Query: 651  --RFRHGSLVMRLPDSD----VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
              R R  + +++L + D    + Q  T +F +++G  G +  L  + Y  L  LQT +  
Sbjct: 1319 FVRLRGHTSLLQLNNEDEKEAIEQRMTTVFASLDGSFGFVRPLTEKSYRRLHFLQTFIGS 1378

Query: 705  VIKGVGGLNHEQWRSFNNEKKTV---DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
            V   + GL+ +  RS    +  V   +A+N +DGD++E +L LS     ++++ + V   
Sbjct: 1379 VTPQIAGLHIKGSRSAKPSQPIVNGRNARNLIDGDVVEQYLHLSLYDKTDLARRLGVGRY 1438

Query: 762  ELCKRVEELTRL 773
             +   + +L R+
Sbjct: 1439 HIIDDLMQLRRM 1450


>gi|302504585|ref|XP_003014251.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
 gi|291177819|gb|EFE33611.1| hypothetical protein ARB_07556 [Arthroderma benhamiae CBS 112371]
          Length = 460

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 33/350 (9%)

Query: 438 QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 494
            T   +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   
Sbjct: 96  HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155

Query: 495 EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
           E+GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C     
Sbjct: 156 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQIT 210

Query: 553 HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
             + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G
Sbjct: 211 PRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAG 270

Query: 613 AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--- 666
            +   N++ +R   K SE A ++  G   +    +L    NR    SLV+     D+   
Sbjct: 271 GDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQDIPTS 327

Query: 667 --------GQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                   G    +++  + G +G+ +  +  +   F + L+  L      + G +H  +
Sbjct: 328 IQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIY 387

Query: 718 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
           R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++
Sbjct: 388 RGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|302654423|ref|XP_003019019.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
 gi|291182709|gb|EFE38374.1| hypothetical protein TRV_07032 [Trichophyton verrucosum HKI 0517]
          Length = 460

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 33/350 (9%)

Query: 438 QTFEFISTYPLDTFEYGCSILSCSF-SDDSNVYYCVGTAY-VLPEENEPTKGRILVF-IV 494
            T   +S   L+  E   SI + SF S +   +  VGT   ++      T G I ++   
Sbjct: 96  HTKSVLSNLELEDNEAAVSIAAVSFTSQEDETFLVVGTGKDMVVSPRTFTCGFIHIYRFQ 155

Query: 495 EDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHG 552
           E+GK L+ I + + +    +L  F G+LLA I   +++Y     D G R+L  +C     
Sbjct: 156 EEGKELEFIHKTKVEQPPLALLGFQGRLLAGIGPDLRIY-----DLGMRQLLRKCQAQIT 210

Query: 553 HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
             + + +QT+G  I+V D+ +S++ ++YK++E A+   A D    W +   ++D +   G
Sbjct: 211 PRVIVGLQTQGSRIIVSDVQESVTYVVYKYQENALIPFADDIIPRWTTCTTMVDYETVAG 270

Query: 613 AENNFNLFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV--- 666
            +   N++ +R   K SE A ++  G   +    +L    NR    SLV+     D+   
Sbjct: 271 GDKFGNIWLLRCPTKASEEADEDGSGAHLIHERQYLQGAPNRL---SLVIHFYSQDIPTS 327

Query: 667 --------GQIPTVIFGTVNGVIGV-IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                   G    +++  + G +G+ +  +  +   F + L+  L      + G +H  +
Sbjct: 328 IQKTQLVAGGRDILVWTGLQGTVGMFVPFITRDDVDFFQTLEMQLASQNPPLAGRDHLIY 387

Query: 718 RSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
           R +         K  +DGDL E+FL L   +   I+  ++ SV E+ +++
Sbjct: 388 RGY-----YAPCKGVIDGDLCETFLLLPNDKKQAIAGELDRSVREIERKI 432


>gi|159123784|gb|EDP48903.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus A1163]
          Length = 1401

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 37/371 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 486
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1028 LKVVSPRTWTVIDSYSLGPDEYVMAVKNMDLEVSENTHERRNMIVVGTAFAR-GEDIPSR 1086

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1087 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1146

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +    Y  E   +    +D
Sbjct: 1147 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1204

Query: 594  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1205 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1264

Query: 651  RFR-------HGSLVMRLPDS---DVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                           M  PDS   D   I   V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1265 TMTLLPRTMVSSEKAMANPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1324

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1325 SQLANSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1382

Query: 760  VEELCKRVEEL 770
              E+   +E +
Sbjct: 1383 EWEIKADLEAI 1393


>gi|146324727|ref|XP_747211.2| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus Af293]
 gi|148886828|sp|Q4WCL1.2|CFT1_ASPFU RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|129556124|gb|EAL85173.2| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus fumigatus Af293]
          Length = 1401

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 37/371 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 486
            ++++  +T+  I +Y L   EY  ++ +       N +       VGTA+    E+ P++
Sbjct: 1028 LKVVSPRTWTVIDSYSLGPDEYVMAVKNMDLEVSENTHERRNMIVVGTAFAR-GEDIPSR 1086

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF V            D KL+LI ++  KGAV +L+   G+  L+AA  QK  +  
Sbjct: 1087 GCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTALSQIGGQGFLIAAQGQKCMVRG 1146

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +    Y  E   +    +D
Sbjct: 1147 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDAVKGLWFAGYSEEPYKMSLFGKD 1204

Query: 594  YNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A E L D      L A+++ NL  ++ + E        RL    ++H+G F  
Sbjct: 1205 QGYLEVVAAEFLPDGDKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLARSKFHMGHFAT 1264

Query: 651  RFR-------HGSLVMRLPDS---DVGQIPT-VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                           M  PDS   D   I   V+  + +G +G++ S+P E Y  L  LQ
Sbjct: 1265 TMTLLPRTMVSSEKAMANPDSMEIDSQTISQQVLITSQSGSVGIVTSVPEESYRRLSALQ 1324

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN   +R+   E      +  LDG+L+  +LD+ + R  EI+  +   
Sbjct: 1325 SQLANSLEHPCGLNPRAYRAV--ESDGTAGRGMLDGNLLYQWLDMGQHRKMEIAARVGAH 1382

Query: 760  VEELCKRVEEL 770
              E+   +E +
Sbjct: 1383 EWEIKADLEAI 1393


>gi|121719617|ref|XP_001276507.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus clavatus NRRL 1]
 gi|148886827|sp|A1C3U1.1|CFT1_ASPCL RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|119404719|gb|EAW15081.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus clavatus NRRL 1]
          Length = 1401

 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 181/436 (41%), Gaps = 57/436 (13%)

Query: 369  DSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEE 426
            DS  + +  +L   TI D     ++ + +GEH   + +   S T+ + +  +      E+
Sbjct: 947  DSKDVVRICQLPPETIYDYS-WTLKKVAIGEHVDHLAYSISSETYVLGTSHSADFKLPED 1005

Query: 427  SEMH-----------------FVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY 469
             E+H                  ++++  +T+  I +Y L   E   ++ + +     N +
Sbjct: 1006 DELHPEWRNEAISFLPELRQCCLKVVHPKTWTVIDSYTLGPDEEIMAVKNMNLEVSENTH 1065

Query: 470  -----YCVGTAYVLPEENEPTKGRILVFIV-----------EDGKLQLIAEKETKGAVYS 513
                   VGTA     E+ P +G I VF V            D KL+LI ++  KGAV +
Sbjct: 1066 ERKNMIVVGTALAR-GEDIPARGCIYVFEVIKVVPDPEKPETDRKLKLIGKELVKGAVTA 1124

Query: 514  LNAFNGK--LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDL 571
            L+   G+  L+AA  QK  +    L++DG+    +      ++  L         +VGD 
Sbjct: 1125 LSEIGGQGFLIAAQGQKCMVRG--LKEDGSLLPVAFMDVQCYVNVLKELKGTGMCIVGDA 1182

Query: 572  MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEG 628
             K I    Y  E   +    +D     + A + L D      L A+++ NL  ++   E 
Sbjct: 1183 FKGIWFAGYSEEPYKMSLFGKDLEYPEVVAADFLPDGDKLFILVADSDCNLHVLQYEPED 1242

Query: 629  ATDEERGRLEVVGEYHLGEFVNRFR-----HGSLVMRLPDSDVGQIPT------VIFGTV 677
                   +L V  ++H+G F +          S  +   DSD  ++        V+  + 
Sbjct: 1243 PMSSNGDKLLVRSKFHMGHFTSTLTLLPRTTASYEIPSADSDSMEVDPRITPQQVLITSQ 1302

Query: 678  NGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDL 737
            +G IG++ S+P E Y  L  LQ+ L   ++   GLN   +R+   E      +  LDG+L
Sbjct: 1303 SGSIGIVTSIPEESYRRLSALQSQLANTVEHPCGLNPRAYRAI--ESDGTAGRGMLDGNL 1360

Query: 738  IESFLDLSRTRMDEIS 753
            +  +L +S+ R  EI+
Sbjct: 1361 LYQWLSMSKQRRMEIA 1376


>gi|443684051|gb|ELT88095.1| hypothetical protein CAPTEDRAFT_161045 [Capitella teleta]
          Length = 1410

 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 180/433 (41%), Gaps = 58/433 (13%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--------ESEMHFVRLLDD------ 437
            +R +PL   P  + +   S+T+++ S +   C +        E E+  V+  D       
Sbjct: 979  VRKVPLRCTPHFVVYHPDSKTYSVVSSQQVPCTQLVRVAGDGEKEIEAVQKDDRFVFPIM 1038

Query: 438  -----QTFEFISTYP-------LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 480
                 Q F  +S  P       L+ +E+   I + +   +  +     Y  VGT      
Sbjct: 1039 NKFNIQLFSPVSWEPIPNTRFDLEEWEHVMCIKTINLKSEGTLSGLKGYVVVGTNLNY-N 1097

Query: 481  ENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+  ++G++ ++ V D            K++++  KE KG V +L+   G L+ AI QK+
Sbjct: 1098 EDVSSRGKLTIYDVIDVVPEPGQPLTKNKIKVVYNKEQKGPVTALDGVQGFLVTAIGQKV 1157

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
              Y W L+D+   +L         I    ++   + I++GD+ KSIS+L Y+ +   +  
Sbjct: 1158 --YIWQLKDN---DLAGIAFIDTQIYIHKMEALKNLIIIGDVCKSISVLRYQEDMKVLSL 1212

Query: 590  RARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG 646
             ++D     +  V  L D+  L    A+   N        +    +   RL    + ++G
Sbjct: 1213 VSKDVRPLAVYGVAYLVDETSLAFIVADKLKNFLVYCYQPDLVQSQGGQRLIRKADINIG 1272

Query: 647  EFVNRFRHGSLVMRLP-----DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
              VN F      +  P     D  +       + T++G IG +  +    Y  L  LQ  
Sbjct: 1273 SLVNAFFRVKCRVSDPSTSKTDQSLAMKHITYYVTLDGSIGYLLPISESLYRRLYMLQKM 1332

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            L + ++   GLN + +R+   E + +    +N +DGDL   +L L+     E++K +  +
Sbjct: 1333 LIQQVQQTAGLNPKAYRTCQTEFRQLINIQRNIIDGDLAWKYLALTSHDRAEMAKRIGTT 1392

Query: 760  VEELCKRVEELTR 772
              ++   + E+ R
Sbjct: 1393 SHQIEDDLLEIDR 1405


>gi|389614684|dbj|BAM20371.1| spliceosomal protein sap, partial [Papilio polytes]
          Length = 541

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 43/296 (14%)

Query: 497 GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHIL 555
           GKL+L+ +        +L AFNG+L+A + + +++Y     D G R+L  +C   H   L
Sbjct: 259 GKLELVHKTPIDDYPGALAAFNGRLMAGVGRMLRMY-----DIGRRKLLRKCENRHIPNL 313

Query: 556 ALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN 615
              ++T G  I V D+ +S+  + YK  E  +   A D N  W++   +LD D  +   +
Sbjct: 314 IADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITNTCVLDYDT-VAMSD 372

Query: 616 NFNLFTVRKNSEGATDE------------ERGRL-------EVVGEYHLGEFVNRFRHGS 656
            F    V +     +D+            +RG L       EVV  +H+GE V   +  +
Sbjct: 373 KFGNVAVMRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKGEVVVNFHVGETVTSLQRAT 432

Query: 657 LVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQTNLRKVIKGVGGLN 713
           L+        G    +++ T  G +G +  LP    E +   + L+ ++R     + G +
Sbjct: 433 LI-------PGGSEALLYATAGGALGAL--LPFTSREDHDXFQHLEMHMRSENAPLCGRD 483

Query: 714 HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
           H  +RS+         KN +DGDL E F  L   +   I+  +  +  E  K++E+
Sbjct: 484 HLSFRSY-----YYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERTPAEGSKKLED 534


>gi|148886829|sp|A2R919.1|CFT1_ASPNC RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|134083776|emb|CAK47110.1| unnamed protein product [Aspergillus niger]
          Length = 1383

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/438 (22%), Positives = 179/438 (40%), Gaps = 61/438 (13%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESEMH-----------------FV 432
            ++ + LGE    + +   S  + +  C   +    E+ E+H                 F+
Sbjct: 942  LKRVHLGEQVDHLAYSTSSGMYVLGTCHATDFKLPEDDELHPEWRNEAISFFPSARGSFI 1001

Query: 433  RLLDDQTFE---------FISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVL 478
            +L+ D   +          + ++ L   EY  +I + S     N +       VGTA+  
Sbjct: 1002 KLVWDHHLQRQDSVILIFHLHSFSLGADEYVMAIKNISLEVSENTHERKDMIVVGTAFAR 1061

Query: 479  PEENEPTKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
              E+ P++G I VF V            D KL+LI ++  KGAV +L+   G+    + Q
Sbjct: 1062 -GEDIPSRGCIYVFEVVQVVPDPDHPETDRKLKLIGKEPVKGAVTALSEIGGQGFVLVAQ 1120

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
              +     L++DG+    +      ++  +         ++GD +K +    Y  E   +
Sbjct: 1121 GQKCMVRGLKEDGSLLPVAFMDMQCYVSVVKELKGTGMCILGDAVKGVWFAGYSEEPYKM 1180

Query: 588  EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
               A+D +   + A E L D   L    A+++ N+  ++ + E        RL    ++H
Sbjct: 1181 SLFAKDLDYLEVCAAEFLPDGKRLFIVVADSDCNIHVLQYDPEDPKSSNGDRLLSRSKFH 1240

Query: 645  LGEFVNRFRHGSLVM----RLPDSDVG-----QIP--TVIFGTVNGVIGVIASLPHEQYL 693
            +G F +        M    ++  S  G     Q P   V+  T NG +G+I  +P E Y 
Sbjct: 1241 MGNFASTLTLLPRTMVSSEKMVSSSDGMDIDNQSPLHQVLMTTQNGSLGLITCIPEESYR 1300

Query: 694  FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEIS 753
             L  LQ+ L   ++   GLN   +R+   E      +  LDG+L+  ++D+S+ R  EI+
Sbjct: 1301 RLSALQSQLTNTLEHPCGLNPRAFRAV--ESDGTAGRGMLDGNLLFKWIDMSKQRKTEIA 1358

Query: 754  KTMNVSVEELCKRVEELT 771
              +     E+   +E ++
Sbjct: 1359 GRVGAREWEIKADLEAIS 1376


>gi|255581562|ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
 gi|223528782|gb|EEF30789.1| spliceosomal protein sap, putative [Ricinus communis]
          Length = 1220

 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI+D  VVD   + Q Q+  C G   +GSLRI+R+GI + +  + +   QG+ G W+
Sbjct: 460 NIAPILDMSVVDHHDEKQEQMFGCCGVAPEGSLRIIRSGISVEKLLRTAPIYQGVTGTWA 519

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           LR    D + +F+V+SF+ ETR+L++ +    + T+  GF     TL C       LVQ+
Sbjct: 520 LRMKVTDLYHSFVVLSFVEETRVLSVGVSFA-DVTDSAGFLPNVCTLACGLVGDGLLVQI 578

Query: 151 TSGSVRLVSST 161
              +VRL   T
Sbjct: 579 HQTAVRLCLPT 589



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 15/193 (7%)

Query: 311 LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
           +G  P+ L   +      + A SDRP ++ ++   L Y++++ +  +H  P  S   P  
Sbjct: 725 IGVTPVFLVPLTDSLDADMIALSDRPWLLQTARHGLSYTSISFQPSTHSTPVCSVECPKG 784

Query: 371 LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESE 428
           L    E  L +  +   ++L+++   LG  PR++ +  +SR   +    L N +C+ +  
Sbjct: 785 LLFVAENSLHLVEMVHSKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTELSNDTCSSD-- 842

Query: 429 MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAY-----VLPE-EN 482
              +  +D  +   +S++ L+  E G S+       +  +   VGT+      ++P  E 
Sbjct: 843 ---ICCVDPLSGSVVSSFKLEHGETGKSMELVRVGTEQVLV--VGTSLSSGPAIMPSGEA 897

Query: 483 EPTKGRILVFIVE 495
           E TKGR++V  +E
Sbjct: 898 ESTKGRLIVLCLE 910


>gi|83314897|ref|XP_730560.1| multisubunit cleavage/polyadenylation specificity factor subunit A
           [Plasmodium yoelii yoelii 17XNL]
 gi|23490318|gb|EAA22125.1| CPSF A subunit region, putative [Plasmodium yoelii yoelii]
          Length = 863

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/449 (22%), Positives = 179/449 (39%), Gaps = 86/449 (19%)

Query: 290 HLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSS-------------------KNTTHVF 330
           +L  +++N     LT+R+K+++   PI  + F+                    K +  +F
Sbjct: 287 YLKKYIINSDNVLLTNRRKINVCRSPIKFKQFNKVCSEKNKIDINNNNNNTCVKKSNFLF 346

Query: 331 AASDRPTVIYSS-NKKLLYSNVNLKEVSHMCPFNS----AAFPDSLAIAKEGE------- 378
             SD P +IYS   KK+  S V++K +  +  FN       F +  +  K+ +       
Sbjct: 347 ICSDNPIIIYSDIKKKISLSKVSIKNIFLVDIFNDFDYLNPFHNFNSFKKKNQNNLYFIF 406

Query: 379 -----LTIGTIDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFV 432
                L I  +++I + +I+ IP      +I  H E       C  + +    ++    +
Sbjct: 407 FDGLSLYISHLNEINETYIQKIPFYRTVEKIAYHNESGLLITSCPTEEKHKTNKNLKQII 466

Query: 433 RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY---------YCVGTAYVLPEENE 483
              +     F  +Y + + +Y  S + C +  + ++Y          CVGTA +    +E
Sbjct: 467 CFFNPHQNSFKYSYIIPS-KYNVSSI-CIYQINKDIYPNKSNINTLICVGTANINDRVSE 524

Query: 484 PTKGRILVFIVEDGKLQLIAEKE------TKGAVYSLNAFNGKLLAAINQK--------- 528
           P+ G I +F  +  K  L   K         G +  L  F  KL++ IN           
Sbjct: 525 PSSGHIYIFFAK-KKANLFEIKHIYTHNINVGGITHLKQFYDKLISTINNTVIYKCVNKK 583

Query: 529 ------------IQLYKWM--------LRDDGTRELQSECGHHGHILALYVQTRGDFIVV 568
                       I L K++        L +DGT    +       I++L V    ++IVV
Sbjct: 584 LIVVILDISDFLINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVI--ENYIVV 641

Query: 569 GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG 628
           GD+M S+++L Y      + E  RDY+  W + V  L    +L ++   N    +K+S  
Sbjct: 642 GDIMTSVTILSYDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIR 701

Query: 629 ATDEERGRLEVVGEYHLGEFVNRFRHGSL 657
             DE+  +L  V  ++ G  VN+    SL
Sbjct: 702 YNDEDSFKLSRVALFNHGHVVNKMLPVSL 730


>gi|301773406|ref|XP_002922132.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1-like [Ailuropoda
            melanoleuca]
          Length = 1469

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 186/464 (40%), Gaps = 87/464 (18%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 1015 IDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1074

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  C                         + E   ++L+   ++E I  + 
Sbjct: 1075 KVYAVATSTNMPCTRIPRMTGEEKEFETIERDDRYIHPQQEAFSIQLISPVSWEAIPNAR 1134

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L+ +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1135 IELEEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1193

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1194 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1248

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1249 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1308

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             LG   ++ + NL       E        RL    ++H+G  VN F       R P    
Sbjct: 1309 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGA 1362

Query: 667  GQIPT-----------VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHE 715
             + P+             F T++G IG++  LP ++       +TN  +       L H 
Sbjct: 1363 AEGPSKKSVVWENKHITWFATLDGGIGLL--LPMQE-------KTNRLQPAXSPRML-HV 1412

Query: 716  QWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
              R   N       +N LDG+L+  +L LS     E++K +  +
Sbjct: 1413 DRRILQNA-----VRNVLDGELLNRYLYLSTMERGELAKKIGTT 1451


>gi|124505011|ref|XP_001351247.1| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium falciparum 3D7]
 gi|7768292|emb|CAB11136.2| CPSF (cleavage and polyadenylation specific factor), subunit A,
            putative [Plasmodium falciparum 3D7]
          Length = 2870

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 107/501 (21%), Positives = 209/501 (41%), Gaps = 71/501 (14%)

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS-NKKLLYSNVNLKEVSHMCP 361
             +++KK+ +    I       K    +F   + P +IYS   KK+  S ++LK +  +  
Sbjct: 2344 FSEKKKIDINQSNII------KKYNFLFVCCESPIIIYSDLKKKINVSKLSLKNIYIVDI 2397

Query: 362  FNS----AAFPDSLAIAKEGE------------LTIGTIDDIQKLHIRSIPLGEHPRRIC 405
            FN       F + L+  K+ +            + I  ++ I+K  ++ IP      +I 
Sbjct: 2398 FNDFNYLNPFHNFLSFKKKNQNNFYFIFYDGSNIHISPLNQIKKTFLKKIPFHRTVEKIA 2457

Query: 406  -HQEQSRTFAICSLKNQSCAEESEMHFVRLLD------DQTFEFISTYPLDTFEY--GCS 456
             H +     A C  + +    E     +   D        T+   S Y + T        
Sbjct: 2458 YHSDTGLLIAACPSEEKHKTNEMMKQIICFFDPYHDSIKYTYIIPSKYTVSTIIIYDNEK 2517

Query: 457  ILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKE------TKGA 510
            ++  +F   S ++  VGT     +  EPT G I +FI +  K  +   K         G 
Sbjct: 2518 LMKSNFDVTSFIF--VGTCNSNEKYTEPTSGHIHIFIAKK-KANIFEIKHIYTHNINYGG 2574

Query: 511  VYSLNAFNGKLLAAINQKI---QLYKWMLRDDG---TRELQSECGHHGHILALY------ 558
            V +L  ++ K++A IN  +    +   +++ +     + LQ +   +  I+ L       
Sbjct: 2575 VTNLVPYDDKIVATINNMVVILDINNLIIKYEAFMDPQNLQPKIEGNNAIVELVSFTPSS 2634

Query: 559  ----VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
                V   GD+IVVGD+M S+++L Y +E   + E  RDY+  W +++  L     + ++
Sbjct: 2635 WIMTVDVYGDYIVVGDIMTSVTILQYDYENSQLFEVCRDYSNIWCTSLCALSKSHIVVSD 2694

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR---FRHGSLVMRLPDSDVGQIPT 671
             + N   ++K+     DE+  +L  V  ++ G  +N+     + +L+    D D   I T
Sbjct: 2695 MDANFIILQKSKFKYNDEDSYKLSSVSLFNHGSIINKMLPLSNTNLIEE--DYDKRNILT 2752

Query: 672  ----VIFGTVNGVIGVIASLPHEQYLFLEK---LQTNLRKVIKGVGGLNHEQWRSFNNEK 724
                ++  +  G I V+  +P   +   +K   ++  +   I  +G L+H  +R +    
Sbjct: 2753 KNDGILCASSEGSISVL--IPFSSFANFKKALCIEIAITDNISSIGNLSHNAYREYKVNF 2810

Query: 725  KTVDAKNFLDGDLIESFLDLS 745
            ++   K  +DG+L++ F  +S
Sbjct: 2811 RSKHCKGIVDGELLKMFFHMS 2831



 Score = 41.2 bits (95), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 24   YVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGIN 75
            Y+E+L    N+GPI+D CVV   +  + +++TC+   + G + I+++G+  N
Sbjct: 970  YIEILSVIQNMGPILDMCVVK-NKNNEYEIITCNSYGRTGCVSIIQSGLKTN 1020


>gi|320165260|gb|EFW42159.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 2631

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 32/205 (15%)

Query: 230  PSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDG 289
            P  + + A+ +W  + V +F LP + L+ +    G+++ RS+ L A EG   L   L DG
Sbjct: 1661 PKATTLVAISLWKTMDVLVFQLPGMELVAQHRFAGDVVVRSLALHAIEGRIKLFVGLADG 1720

Query: 290  HLLNFLLNMKTG--------ELTDRKKVSLGTQPITLRTF---------------SSKNT 326
            HL+ F L  ++         E  +R+ V +G+ P+TL  F               + +  
Sbjct: 1721 HLVQFTLVPRSVVAGTKCELEFAERRAVLVGSSPLTLEVFPLAGPADNDHGESVEAGRPP 1780

Query: 327  THVFAASDRPTVIY----SSNKKLLYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTI 381
              +    D+P ++      S  ++L  N+ L E S  C F+SA F  S L +A +G +++
Sbjct: 1781 VGLLVCCDKPALVLPGKTDSQTQVLPLNIALAEKS--CCFSSALFRQSTLLLAAQGRISV 1838

Query: 382  GTID--DIQKLHIRSIPLGEHPRRI 404
             T    D ++LH   + LG  P  I
Sbjct: 1839 ATFAQLDGKQLHAEKLLLGATPLAI 1863


>gi|297792471|ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309955|gb|EFH40379.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1444

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 20/300 (6%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 495
            +E  +T P+ + E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1099 WETKATIPMQSSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1157

Query: 496  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1158 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1213

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1214 DAPPLYVVSMNVVKTFILLGDVHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGN 1273

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             L    ++   N+       + A   +  +L    E+H+G  V +F    L M    +D 
Sbjct: 1274 TLSLAVSDEQKNIQVFYYAPKMAESWKGQKLLSRAEFHVGSHVTKFLR--LQMVTSGADK 1331

Query: 667  GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 726
                 ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F    K 
Sbjct: 1332 TNRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPHSFRQFRTSGKA 1391



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  VN+GP+ DF              + +Q   ++V CSG  K+G+L ++R  +    
Sbjct: 507 VRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSVRPEM 566

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               ++ +D +  +L++S   E R + +   D L
Sbjct: 567 ITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISV--EARTMVLETADLL 624

Query: 123 EE-TEIEGFCSQTQTL 137
            E TE   +  Q +T+
Sbjct: 625 TEVTESVDYYVQGRTI 640


>gi|225679191|gb|EEH17475.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 1377

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 182/421 (43%), Gaps = 46/421 (10%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-------FVRLLDDQTFEFI 443
            R I LGE    + +   S T+ + + +  +    E+ E+H        V+LL+ +T+  I
Sbjct: 954  RKIGLGEQVDSVEYSSSSETYVLGTSQKVDFKLPEDDEIHPEWRNEESVKLLNPRTWSII 1013

Query: 444  STYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV---- 494
             +Y L T E      C  L  S  + +      VGTA    E+    +G I VF V    
Sbjct: 1014 DSYQLRTAERVMCVKCLNLEASEITHERKEMIAVGTALTRGEDIA-ARGCIYVFEVIKVV 1072

Query: 495  -------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWMLRDDGTRELQ 545
                    + KL+LIA++E KGA+ SL+   G+  L+AA  QK  +    L++DG+    
Sbjct: 1073 PEVDRPETNRKLKLIAKEEVKGAITSLSGIGGQGFLIAAQGQKCIVRG--LKEDGSLLPV 1130

Query: 546  SECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL 605
            +      ++  L         ++GD +K +    Y  E   +   ++D  +  + A + L
Sbjct: 1131 AFMDMQCYVSVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKDDGSLQVMAADFL 1190

Query: 606  DDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR---HGSLVM 659
                    + A+++ N+  ++ + E     +  RL     +H G+F +        S++ 
Sbjct: 1191 PHGKRLFIMVADDDCNIHVLQYDPEDPGSAKGDRLLHRSTFHTGQFASTLTLLPRTSVLS 1250

Query: 660  RLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGG 711
            + P+++         G +  V+  +  G I +I  +    Y  L  LQ+ +   ++   G
Sbjct: 1251 QGPEAEANAMDLDSSGPLHQVLVTSETGSIALITPVSEMAYRRLSALQSQMINTLEHPCG 1310

Query: 712  LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
            LN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +   V E+   +E + 
Sbjct: 1311 LNPRAFRAV--ESDGIGGRGMVDGDLVQKWLDLGTQRKAEIASRVGADVWEIRADLEAIG 1368

Query: 772  R 772
            +
Sbjct: 1369 K 1369


>gi|47217773|emb|CAG05995.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1446

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 112/498 (22%), Positives = 196/498 (39%), Gaps = 106/498 (21%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            +    PF++   P   L   K+GEL I  +           +R IPL      + +  +S
Sbjct: 943  IESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWPVRKIPLRCTVHYVSYHVES 1002

Query: 411  RT-------FAICSLKNQSC-------AEESEMHFV----------------RLLDDQTF 440
            +        +A+C+   + C        EE E   +                +L+   ++
Sbjct: 1003 KASLSHCCVYAVCTSVKELCTRIPRMTGEEKEYETIERDERYINPQQDKFSIQLISPVSW 1062

Query: 441  EFISTYPLD--TFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF- 492
            E I    +D   +EY   + + +      V     Y   GT  +  EE    +GRIL+  
Sbjct: 1063 EAIPNTRIDLEEWEYVTCMKTVALRSQETVSGLKGYIAAGTCLMQGEEVT-CRGRILILD 1121

Query: 493  ----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
                + E G      K +++ EKE KG V +L   NG L++AI QKI L  W+L+D+   
Sbjct: 1122 VIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WVLKDN--- 1176

Query: 543  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
            +L         +    + +  +FI+  DLMKS+SLL Y+ E   +   +RD     + ++
Sbjct: 1177 DLTGMAFIDTQLYIHQMMSIKNFILAADLMKSVSLLRYQEESKTLSLVSRDAKPLEVYSI 1236

Query: 603  EILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
            E + D+  LG   ++ + NL+      E        RL    +++ G  +N F       
Sbjct: 1237 EFMVDNSQLGFLVSDRDKNLYVYMYLPEAKESFGGMRLLRRADFNAGANINTF------W 1290

Query: 660  RLPDS---DVGQIPTVI--------FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 708
            R+P     + G    +         F T++G +G++  +  + Y  L  LQ  L  ++  
Sbjct: 1291 RMPCRGALEAGSRKAMTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLSH 1350

Query: 709  VGGLNHEQWRSFNNEKKTV---------------------------DAKNFLDGDLIESF 741
              GLN + +R    ++ +                              KN LDG+L+  +
Sbjct: 1351 HAGLNPKAFRCVGADRTSAAMLSGMLPDFATSVSRMLHCDRRSLQNPVKNILDGELLNKY 1410

Query: 742  LDLSRTRMDEISKTMNVS 759
            L LS     E++K +  +
Sbjct: 1411 LYLSMMERSELAKKIGTT 1428



 Score = 42.7 bits (99), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 35/166 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + QG      +VV CSG  K+G+L +++  I    
Sbjct: 430 EVCDSILNIGPCANASMGEPAFLSEEFQGNPEPDLEVVVCSGHGKNGALSVLQRSIRPQV 489

Query: 77  QASVELQGIKGMWSLRSS-----------------------TDDPFDTFLVVSFISETRI 113
             + EL G   MW++ S+                        D     FL++S    T I
Sbjct: 490 VTTFELPGCHDMWTVISNEVKEDKKVPQSPGSFTATHYSLEEDTKKHGFLILSREDSTMI 549

Query: 114 LAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           L      E+ E +  GF +Q  T+F  +   N+ ++QV+   +RL+
Sbjct: 550 LQTG--QEIMELDTSGFATQGPTVFAGNIGDNKYIIQVSPMGIRLL 593


>gi|157872916|ref|XP_001684981.1| putative CPSF-domain protein [Leishmania major strain Friedlin]
 gi|68128051|emb|CAJ06910.1| putative CPSF-domain protein [Leishmania major strain Friedlin]
          Length = 1347

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 176/838 (21%), Positives = 321/838 (38%), Gaps = 147/838 (17%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVEL----QGIKGM 88
            N GP++D  +   +      VV  +G ++ G + ++R+ + + EQA + L    Q I   
Sbjct: 458  NCGPVLD--MTTHKNGSHNSVVASTGIHRGGGISVLRSAVMLREQADIPLRCHPQRILCA 515

Query: 89   WSLRS-STDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
              L   +T    + F +VS        A+ LE+       E            DA  NQL
Sbjct: 516  GELMCITTPAAANRFFLVS------ARALTLEELAPHVFPEIVSRHLLVELGLDAALNQL 569

Query: 148  VQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILT 207
            V +++  +  +  +   +    + P         A+  Q+L A     L    + DGI+ 
Sbjct: 570  VLISARGIAWLRLSGPRVEAVSQLP-------RQADDPQILFAVVRHGLTV--VCDGIVV 620

Query: 208  EVKHAQ-LEYEISCLDINPIGENPSYSQ-IAAVGMWTDISVRIFSLPDLNLITKEHLGGE 265
             V   Q L Y +  L    I      S  +  +G W D  V ++ L          L  +
Sbjct: 621  TVYRGQDLVYTVPSLAGVAISSVSLVSPTLLVLGQW-DGVVALYELGHRQADVVGLLLLD 679

Query: 266  IIPRSVLLCAFEGIS-------YLLCALGDGHLLNFLLN-----MKTGELTDRKKVSLGT 313
             +PR++  CA   +S         L  +  G L  FL+      ++ GE   R  V +  
Sbjct: 680  SVPRTIA-CAVPPLSPSSVVGEAALPMIYIGTLHGFLVGTTVALLRRGE--KRLSVFVAP 736

Query: 314  QPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAI 373
             P+ L   + ++   +   +    V+  +   L  + ++L  VS     ++     +   
Sbjct: 737  HPLELLELAGRHAGLLCLGNVPLVVLCVAGGGLQLTGLHLTGVSAAATVDADLQCYAFYS 796

Query: 374  AKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHF-- 431
              +G L +G+++ ++K     +PLGE   ++ H+  +      S++     E  E+ F  
Sbjct: 797  KHDGRLHVGSLEALEKTSRTFLPLGETITQL-HETAAWGGYAASVRK---VEGDEVLFLP 852

Query: 432  -------------------VRLLDDQTFEFISTYPLDTFEYGCSI------LSCSFSDDS 466
                               V LL+++   F+ T  LD  E G +       +  + SD +
Sbjct: 853  SAVIQFPWAADLALWRSAAVPLLENERCVFLQTVRLDGGEGGGAGERGGEPIDVAASDSA 912

Query: 467  NV-------YYCVGTAYVLPEENEPTKGRILVFIV----EDGKLQLIAEKETKGAVYSLN 515
             V          +G+++  P+E     GRI    +    +  +L LIA K+  GA+    
Sbjct: 913  GVSEEEWQHLLLIGSSFTFPDEQRARSGRITWCALREEHQQQRLHLIASKDIGGALQCCA 972

Query: 516  A---FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG 569
            A   + G++   +N  + LYKW   +D T   +  C        ++ LY  +    ++V 
Sbjct: 973  AVPHYKGRIALGVNGCVCLYKWN-TEDQTFVAEERCRVGLTVTKLIPLYHTSLAASVLVA 1031

Query: 570  -DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLF 620
             D+  S   +     +G+++   RD          ++D  I   AEN        NF   
Sbjct: 1032 LDVRHSAFFIEVDTLQGSLKVLCRDAELRG-----VMDGHIGSDAENLCLFDDSLNFTAL 1086

Query: 621  TV---------RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLPDSDVG 667
             V            +  A+   + R EV  + HLG+ V   R GS     +M  P S   
Sbjct: 1087 RVVPLPVEAGDGDAAAAASVTAQYRFEVRAQCHLGDLVTCVRQGSFAATSLMEAPASCAS 1146

Query: 668  QI----------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                        P ++F T +G  GV+  +    YL L  L+ +L + ++ +GGL+H+ +
Sbjct: 1147 AQNRLLLPGIAGPQLVFATAHGGFGVVTPVHAATYLVLRTLEASLVRTLQPLGGLSHQAF 1206

Query: 718  R--------------------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
            R                    +   E+ +  +  N +DGD++E F+ LS +   ++ +
Sbjct: 1207 REVLRSGQERGVSYLASKTGCALTRERLRRYEPLNTVDGDMVEQFVQLSVSDKKQVCR 1264


>gi|240280498|gb|EER44002.1| pre-mRNA-splicing factor rse1 [Ajellomyces capsulatus H143]
          Length = 305

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 35/306 (11%)

Query: 485 TKGRILVF-IVEDGK-LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
           T G I ++   E+GK L+ I + + +    +L  F G+LLA I   +++Y   ++    R
Sbjct: 9   TAGFIHIYRFQEEGKELEFIHKTKVEQPPMALLGFQGRLLAGIGTDLRIYDLGMKQ-MLR 67

Query: 543 ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
           + Q+    H   L + +QT+G  I+V D+ +S++ ++YK++E  +     D  + W +  
Sbjct: 68  KCQASVVPH---LVVGLQTQGSRIIVSDVQESLTYVVYKYQENRLIPFVDDVISRWTTCT 124

Query: 603 EILDDDIYLGAENNFNLFTVR---KNSEGATDEERG---------------RLEVVGEYH 644
            ++D +   G +   NL+ +R   K SE A ++  G               RL +V  ++
Sbjct: 125 TMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQYLQGAPNRLNLVAHFY 184

Query: 645 LGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRK 704
             +     +   LV    D  V    T + GTV+ +I  I+    E+  F + L+  L  
Sbjct: 185 PQDLPTSIQKAQLVTGGRDILVW---TGLQGTVSMLIPFIS---REEVDFFQSLEMQLAA 238

Query: 705 VIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
               + G +H  +RS+        AK  +DGDL E++L L   +  +I+  ++ SV E+ 
Sbjct: 239 QNPPLAGRDHLIYRSY-----YAPAKGTIDGDLCETYLLLPNDKKQQIAGELDRSVREIE 293

Query: 765 KRVEEL 770
           +++ ++
Sbjct: 294 RKIADM 299


>gi|295665178|ref|XP_002793140.1| cleavage and polyadenylation specificity factor subunit A
            [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278054|gb|EEH33620.1| cleavage and polyadenylation specificity factor subunit A
            [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1408

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 185/431 (42%), Gaps = 56/431 (12%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 433
            R I LGE    + +   S T+ + + +  +    E+ E+H                  V+
Sbjct: 977  RKIGLGEQVDSVEYSSSSETYVLGTSQKVDFKLPEDDEIHPEWRNEVISFFPQIDKGSVK 1036

Query: 434  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 488
            LL+ +T+  I +Y L T E      C  L  S  + +      VGTA    E+    +G 
Sbjct: 1037 LLNPRTWSIIDSYQLRTSERVMCVKCLNLEASEITHERKEMIAVGTALTRGEDIA-ARGC 1095

Query: 489  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 535
            I VF V            + KL+LIA++E KGA+ SL+   G+  L+AA  QK  +    
Sbjct: 1096 IYVFEVIKVVPEVDRPETNRKLKLIAKEEVKGAITSLSGIGGQGFLIAAQGQKCIVRG-- 1153

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D  
Sbjct: 1154 LKEDGSLLPVAFMDMQCYVSVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKDDG 1213

Query: 596  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
            +  + A + L D   +Y + A+++ N+  ++ + E     +  RL     +H G+F +  
Sbjct: 1214 SLQVMAADFLPDGKRLYIMVADDDCNIHVLQYDPEDPGSAKGDRLLHRSTFHTGQFASTL 1273

Query: 653  R---HGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTN 701
                  S++ + P+++         G +  V+  +  G I +I  +    Y  L  LQ+ 
Sbjct: 1274 TLLPRTSVLSQGPETEANAMDLDLSGPLHQVLVTSETGSIALITPVSEMAYRRLSALQSQ 1333

Query: 702  LRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVE 761
            +   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +   V 
Sbjct: 1334 MINTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVQKWLDLGTQRKAEIASRVGADVW 1391

Query: 762  ELCKRVEELTR 772
            E+   +E + +
Sbjct: 1392 EIRADLEAIGK 1402


>gi|358348136|ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
 gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
          Length = 1370

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI D    D   +   Q+  C G   +GSLR++++GI + +  +     +G+ G W+
Sbjct: 461 NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWT 520

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           +R    D + +FLV+SF+ ETRIL++ L    + T+  GF     TL C       LVQ+
Sbjct: 521 VRMKISDQYHSFLVLSFLGETRILSVGLSFT-DVTDSVGFQPNVCTLACGLVSDGLLVQI 579

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              +V+L   T          S  +   W  P   ++++     + ++++T     +++ 
Sbjct: 580 YQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDNLNISLGAVGHNFIVVSTSNPCFLFI- 637

Query: 201 IGDGILT-------EVKHAQLEYEISCLDI 223
           +G  +L+       E++H +L+ E+SC+ I
Sbjct: 638 LGVRMLSAYQYEIYEMQHLELQNEVSCISI 667



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 23/205 (11%)

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKN 625
            I VGD    I    Y  E   +E+   D +   ++   ++DD+  + ++   ++  +  +
Sbjct: 1134 IAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAVLCSD 1193

Query: 626  ----SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV---GQIP-------- 670
                   A+ E   RL     Y + E     R GS   RLP  D+   G  P        
Sbjct: 1194 HLEAPNNASTECNLRLSCA--YFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQ 1251

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL--RKVIKGVGGLNHEQWRSFNNEKKTV 727
             T++  T+ G I +   L  E+Y  LE +Q  L    +   V G +H ++RS  N    V
Sbjct: 1252 NTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENP---V 1308

Query: 728  DAKNFLDGDLIESFLDLSRTRMDEI 752
                 LDGD++  FL+L+  + + I
Sbjct: 1309 GTPKILDGDMLTQFLELTNMQQNNI 1333



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 15/193 (7%)

Query: 311  LGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDS 370
            +G  P+ L          + A SDRP +++S+   + Y++++ +  SH  P  S   P  
Sbjct: 817  IGITPVFLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHATPVCSIDCPKG 876

Query: 371  LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--CSLKNQSCAEESE 428
            +    E  L +  +   ++L++R   L   PR++ +  +S+   +    L   +C  +  
Sbjct: 877  ILFVAENSLHLVEMVYSKRLNMRKFHLKGTPRKVLYHNESQMLLVMRTELSIGTCLSD-- 934

Query: 429  MHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA-YVLPE-----EN 482
               +  +D  +   +S++ L+  E   S+       +  +   VGT+ Y  P      E 
Sbjct: 935  ---ICCVDPLSGSVLSSFRLELGETATSMELIRVGSEQVLV--VGTSLYSGPPAIPSGEA 989

Query: 483  EPTKGRILVFIVE 495
            E  KGR+LV  ++
Sbjct: 990  ESAKGRLLVLCID 1002


>gi|358348106|ref|XP_003638090.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504025|gb|AES85228.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 642

 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI D    D   +   Q+  C G   +GSLR++++GI + +  +     +G+ G W+
Sbjct: 281 NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWT 340

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           +R    D + +FLV+SF+ ETRIL++ L    + T+  GF     TL C       LVQ+
Sbjct: 341 VRMKISDQYHSFLVLSFLGETRILSVGLSFT-DVTDSVGFQPNVCTLACGLVSDGLLVQI 399

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              +V+L   T          S  +   W  P   ++++     + ++++T     +++ 
Sbjct: 400 YQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDNLNISLGAVGHNFIVVSTSNPCFLFI- 457

Query: 201 IGDGILT-------EVKHAQLEYEISCLDI 223
           +G  +L+       E++H +L+ E+SC+ I
Sbjct: 458 LGVRMLSAYQYEIYEMQHLELQNEVSCISI 487


>gi|294654658|ref|XP_456718.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
 gi|218511767|sp|Q6BYK1.2|RSE1_DEBHA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|199429049|emb|CAG84677.2| DEHA2A08932p [Debaryomyces hansenii CBS767]
          Length = 1256

 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 52/306 (16%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTREL----QSECGHHGHI 554
            L+ + + E      ++  FNG+LL  ++  ++LY     D G R+L     S   +  +I
Sbjct: 963  LEFVHKTELDYQPTAIIPFNGRLLVGMSNFLRLY-----DLGQRQLLRKASSNIEYLKNI 1017

Query: 555  LALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAE 614
            + L  Q  G  IVVGD   S + + Y   E      A D     ++A+  LD D  +G +
Sbjct: 1018 IRLTHQG-GSRIVVGDSSMSTTFVKYDSTENQFIPFADDIMKRQITALVTLDYDTIIGGD 1076

Query: 615  NNFNLFTVR----------------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLV 658
               N+F  R                +  E   +    RL+ + E++L +    F  GSLV
Sbjct: 1077 KFGNIFVSRVPETISQQSDKDWSLLRYQESYLNGSGSRLKNICEFYLQDIPTSFTKGSLV 1136

Query: 659  MRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVI--------KGV 709
            M       G   ++I+  + G +G++  L  E  + FL  LQ  LRK          K  
Sbjct: 1137 M-------GGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDK 1189

Query: 710  GGLN-----HEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
             G N     H ++RS+ N       KN +DGDLIE F +LS++    I   +N +  E+ 
Sbjct: 1190 NGYNLLGKDHLKFRSYYNP-----VKNVMDGDLIERFYELSQSMKIRIGTELNRTPREIE 1244

Query: 765  KRVEEL 770
            K++ E+
Sbjct: 1245 KKISEM 1250



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 34/341 (9%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGS-LRIVRNGIGINEQASVELQ 83
           V+++E    L PI D  +++  R           A    S L+ + +GI  N   S  L 
Sbjct: 409 VDIME---TLNPITDGALIETLRPEVPDPFKQLTALSSHSYLKTLTHGISTNTVVSSPLP 465

Query: 84  GIK--GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHD 141
            IK   + + R   +   D +LV+S    ++ L +++ + +EE     F +   T+    
Sbjct: 466 -IKPTAIHTTRIFAESANDEYLVISSTLSSQTLVLSIGEVVEEVNDSQFVTNEPTINVQQ 524

Query: 142 AIYNQLVQVTSGSVRLVSSTSR-----ELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
              + +VQ+ S  +R +  T R     +   +W  P G S+  A+ N  QV++      +
Sbjct: 525 VGKSSVVQIYSNGIRHIKHTMRNDTIEKKYTDWYPPAGISIIQASTNNEQVIIGLSNREI 584

Query: 197 VYLEIG--DGILTEVKHAQLEYE--------ISCLDINPIGENPSYSQIAAVGMWTDISV 246
            Y EI   D  L E +  +LE          IS   I+ +    SY   A VG  +D ++
Sbjct: 585 CYFEIDPHDDQLVEYQE-RLEMSGGSISALAISSSSISKLQRKSSY---AIVG-CSDETI 639

Query: 247 RIFSLPD---LNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGEL 303
           +  SL     L ++T + L       S+ +      + +   + +G  +   ++  TG+L
Sbjct: 640 QAISLKPHNCLEIVTLQALSAN--SSSIAMVPHGYSTSVHIGMENGLYVRVTIDEITGKL 697

Query: 304 TDRKKVSLGTQPITLRTFSSKNTTH--VFAASDRPTVIYSS 342
           +D +   LG++P+ L            + A S RP + Y S
Sbjct: 698 SDTRIQFLGSKPVQLSVIGLPQLQQNGLLAISSRPWIGYYS 738


>gi|358348118|ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
 gi|355504031|gb|AES85234.1| DNA damage-binding protein, partial [Medicago truncatula]
          Length = 822

 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE--QASVELQGIKGMWS 90
           N+ PI D    D   +   Q+  C G   +GSLR++++GI + +  +     +G+ G W+
Sbjct: 461 NIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWT 520

Query: 91  LRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQV 150
           +R    D + +FLV+SF+ ETRIL++ L    + T+  GF     TL C       LVQ+
Sbjct: 521 VRMKISDQYHSFLVLSFLGETRILSVGLSFT-DVTDSVGFQPNVCTLACGLVSDGLLVQI 579

Query: 151 TSGSVRLVSST----------SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLE 200
              +V+L   T          S  +   W  P   ++++     + ++++T     +++ 
Sbjct: 580 YQSAVKLCLPTKDGHSEGIPLSSPICTSWY-PDNLNISLGAVGHNFIVVSTSNPCFLFI- 637

Query: 201 IGDGILT-------EVKHAQLEYEISCLDI 223
           +G  +L+       E++H +L+ E+SC+ I
Sbjct: 638 LGVRMLSAYQYEIYEMQHLELQNEVSCISI 667


>gi|159486547|ref|XP_001701300.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
           [Chlamydomonas reinhardtii]
 gi|158271783|gb|EDO97595.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
           [Chlamydomonas reinhardtii]
          Length = 1078

 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 5/171 (2%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK 86
           +++   +L PI D  V +L  +   Q+    G     SL ++R G+ + E A   L G  
Sbjct: 384 LIDEMASLMPITDMKVANLLGEEIPQIYALCGRGPRASLSVLRPGLAVTELAVSPLPGAP 443

Query: 87  -GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
             +W++R +  D +D ++VVSF + T  L  ++ +E++ET   GF     TL       N
Sbjct: 444 TAVWTVRRAASDEYDAYIVVSFANAT--LVFSIGEEVKETNESGFLGTVPTLHTQLLADN 501

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHL 196
            ++QV  G +R +    R   NEWK P    +  A +N  QV +A  GG +
Sbjct: 502 SMLQVYPGGLRHIRPDRR--INEWKVPGRRVIKAAASNDKQVAIALQGGEV 550



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 38/303 (12%)

Query: 489  ILVFIVEDG--KLQLIAEKETKGAVY-SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQ 545
            I V+ + DG  +L L+ + +  G V  +L  F G+LLA +   ++LY     D G +++ 
Sbjct: 788  IRVYRLGDGGRRLDLLHKTQVDGGVPGALAGFKGRLLAGVGPTLRLY-----DMGKKKML 842

Query: 546  SECGHHG------HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWM 599
             +C ++       H+       R          +S+ ++ YK  + A    A D    ++
Sbjct: 843  RKCEYNRWTNIFLHVFFYRPYFRSS-------QESVHMMRYKKADNAFYIFADDVAPRYL 895

Query: 600  SAVEILDDDIYLGAENNFNLFTVRKNSEGAT----DEERGRLEVV-----GEYHLGEFVN 650
            SA+  LD D     +   NL  +R   E +     D   G++        G  H  E + 
Sbjct: 896  SALLPLDYDTIATGDKFGNLVILRLPQEASQQVEDDPTGGKMAAASGKLNGAPHKLEELV 955

Query: 651  RFRHGSLVMRLPDSDV--GQIPTVIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIK 707
            +F  G  +  L  +++  G    +++ TV G IGV+      E   F   L+ +LR+   
Sbjct: 956  KFHVGDTITALQRAEMQAGGQEVLVYSTVMGAIGVVYPFTSREDVDFFSHLEMHLRQENP 1015

Query: 708  GVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             + G +H  +RS          +N +DGDL   +  +   +   I++ M+ +  E+ K++
Sbjct: 1016 PLAGRDHLAYRS-----AYFPVRNCVDGDLCSQYASIPMKKQQMIAEAMDRTTGEMLKKL 1070

Query: 768  EEL 770
            E++
Sbjct: 1071 EDI 1073


>gi|12805469|gb|AAH02210.1| Ddb1 protein, partial [Mus musculus]
          Length = 86

 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 10/86 (11%)

Query: 699 QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN- 757
           Q  L KVIK VG + H  WRSF+ E+KT  A  F+DGDLIESFLD+SR +M E+   +  
Sbjct: 1   QNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQY 60

Query: 758 ---------VSVEELCKRVEELTRLH 774
                     + ++L K VEELTR+H
Sbjct: 61  DDGSGMKREATADDLIKVVEELTRIH 86


>gi|154285962|ref|XP_001543776.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407417|gb|EDN02958.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1283

 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 181/434 (41%), Gaps = 61/434 (14%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLKNQSC----AEESEMH-----------------F 431
            R I LGE    + +   S T+ I +  NQ       E+ E+H                  
Sbjct: 851  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 908

Query: 432  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 486
            V+LL  +T+  I +Y L T E      C  L  S  + +      VGTA +   E+   +
Sbjct: 909  VKLLTPRTWSIIDSYNLRTAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 967

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 968  GCIYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGSLIAAQGQKCIVRG 1027

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1028 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1085

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1086 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1145

Query: 651  RF----RHGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1146 TMTLLPRTATSSSQRPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1205

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1206 QSQLTNTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1263

Query: 759  SVEELCKRVEELTR 772
             V E+   +E + +
Sbjct: 1264 DVWEIRADLEAIGK 1277


>gi|339253000|ref|XP_003371723.1| cleavage and polyadenylation specificity factor subunit 1
            [Trichinella spiralis]
 gi|316967988|gb|EFV52332.1| cleavage and polyadenylation specificity factor subunit 1
            [Trichinella spiralis]
          Length = 1376

 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 29/308 (9%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE + P         +   KL+++  KE KG V SL +  G LL  + QK+  Y W  
Sbjct: 1081 VVPEPDRP---------MTKFKLKVVYSKEQKGPVTSLCSLRGYLLTGMGQKV--YIWQY 1129

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGD---FIVVGDLMKSISLLIYKHEEGAIEERARD 593
            +D+         G     L +YV          +  D    +SLL Y+ E  A+   +RD
Sbjct: 1130 KDNAL------VGISFLDLQVYVHQMASIRYLALTADAFFGVSLLRYQEEYKALSLVSRD 1183

Query: 594  YNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
               + + AVE L D     +L      ++ T     E        RL    +YH G  VN
Sbjct: 1184 PRPDEVLAVEFLVDRTDLSFLMTSAAGDILTYVYLPESLDSFGGQRLVPQADYHFGSQVN 1243

Query: 651  RFR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI 706
             F     H   +      +V Q   +IF + +G +  +  LP  +Y  L  LQ+ L  ++
Sbjct: 1244 AFVRMRCHAQEIAGRKRQEVLQRQGLIFASSDGSVNYLLPLPEREYRLLGMLQSLLIDML 1303

Query: 707  KGVGGLNHEQWRS--FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELC 764
                GLN + +R+  F N       KN +DG++   +L +   + ++I + +  S  ++ 
Sbjct: 1304 PSFAGLNVDDYRTVRFPNSCLREPTKNIIDGNICMLYLYIDALQQEDIVRQIGSSHSQIM 1363

Query: 765  KRVEELTR 772
              +  + R
Sbjct: 1364 LELAYMER 1371


>gi|324499955|gb|ADY39993.1| Cleavage and polyadenylation specificity factor subunit 1 [Ascaris
            suum]
          Length = 1434

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 146/306 (47%), Gaps = 25/306 (8%)

Query: 479  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            PE  +PT            +++ + +KE KG V SL + NG LLA + QK+  + W+ RD
Sbjct: 1139 PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLAGMGQKV--FIWLFRD 1187

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA-- 596
            +  + + S    H +I  L V  R +  +  D+ +S++LL Y+ E  A+   +RD  A  
Sbjct: 1188 NNLQGI-SFLDMHFYIHQL-VGVR-NLALACDIYRSVALLRYQEEYKALSLASRDMRAVV 1244

Query: 597  -NWMSAVEILDDD--IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
               M+A  ++D+    ++ ++   N+       E        RL +  E ++G  VN F 
Sbjct: 1245 QPPMAAQFLIDNRQMAFIMSDEAANIAVFNYLPEALESSGGERLILRSEINIGTNVNSFM 1304

Query: 654  H--GSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGV 709
               G +     +++   +   +V+F +++G  G +  L  + +  L  LQ  +  ++   
Sbjct: 1305 RVKGHISSGFVENEHYSLNRQSVLFCSLDGSFGFVRPLSEKVFRRLHMLQQLMSSLVAQA 1364

Query: 710  GGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRV 767
             GLN +  R+   ++    ++ +N +DGD++  +L LS    +++++ +  S   +   +
Sbjct: 1365 AGLNVKGSRAARPQRPNHYLNTRNMVDGDVVFQYLHLSLADKNDLARKLGTSRYHIIDDL 1424

Query: 768  EELTRL 773
             E++RL
Sbjct: 1425 TEISRL 1430


>gi|24415580|gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
            subunit [Arabidopsis thaliana]
          Length = 1442

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 495
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1097 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1155

Query: 496  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1156 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1211

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 607
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1212 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1271

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1272 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1327

Query: 667  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1328 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1387

Query: 725  KT 726
            K 
Sbjct: 1388 KA 1389



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  VN+GP+ DF              + +Q   ++V CSG  K+G+L ++R  I    
Sbjct: 507 VRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEM 566

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               ++ +D +  +L++S   E R + +   D L
Sbjct: 567 ITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISL--EARTMVLETADLL 624

Query: 123 EE-TEIEGFCSQTQTL 137
            E TE   +  Q +T+
Sbjct: 625 TEVTESVDYYVQGRTI 640


>gi|30696088|ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
 gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit
            1; AltName: Full=Cleavage and polyadenylation specificity
            factor 160 kDa subunit; Short=AtCPSF160; Short=CPSF 160
            kDa subunit
 gi|332008729|gb|AED96112.1| cleavage and polyadenylation specificity factor subunit 1
            [Arabidopsis thaliana]
          Length = 1442

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 495
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1097 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1155

Query: 496  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1156 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1211

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 607
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1212 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1271

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1272 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1327

Query: 667  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1328 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1387

Query: 725  KT 726
            K 
Sbjct: 1388 KA 1389



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  VN+GP+ DF              + +Q   ++V CSG  K+G+L ++R  I    
Sbjct: 507 VRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEM 566

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               ++ +D +  +L++S   E R + +   D L
Sbjct: 567 ITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISL--EARTMVLETADLL 624

Query: 123 EE-TEIEGFCSQTQTL 137
            E TE   +  Q +T+
Sbjct: 625 TEVTESVDYYVQGRTI 640


>gi|10257491|dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit [Arabidopsis
            thaliana]
          Length = 1448

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 24/302 (7%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE 495
            +E  +  P+ T E+  ++    L  + + ++     VGTAYV   E+   +GR+L+F   
Sbjct: 1103 WETKAKIPMQTSEHALTVRVVTLLNASTGENETLLAVGTAYV-QGEDVAARGRVLLFSFG 1161

Query: 496  ---DGKLQLIAE---KETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
               D    ++ E   +E KGA+ ++ +  G LL +   KI L+KW    +GT        
Sbjct: 1162 KNGDNSQNVVTEVYSRELKGAISAVASIQGHLLISSGPKIILHKW----NGTELNGVAFF 1217

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD-- 607
                +  + +     FI++GD+ KSI  L +K +   +   A+D+ +    A E L D  
Sbjct: 1218 DAPPLYVVSMNVVKSFILLGDVHKSIYFLSWKEQGSQLSLLAKDFESLDCFATEFLIDGS 1277

Query: 608  DIYLGAENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
             + L   +      V   +    +  +G +L    E+H+G  V++F    L +++  S  
Sbjct: 1278 TLSLAVSDEQKNIQVFYYAPKMIESWKGLKLLSRAEFHVGAHVSKF----LRLQMVSSGA 1333

Query: 667  GQIP--TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK 724
             +I    ++FGT++G  G IA L    +  L+ LQ  L   +  V GLN   +R F +  
Sbjct: 1334 DKINRFALLFGTLDGSFGCIAPLDEVTFRRLQSLQKKLVDAVPHVAGLNPLAFRQFRSSG 1393

Query: 725  KT 726
            K 
Sbjct: 1394 KA 1395



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 27/136 (19%)

Query: 27  VLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           V +  VN+GP+ DF              + +Q   ++V CSG  K+G+L ++R  I    
Sbjct: 513 VRDSLVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEM 572

Query: 77  QASVELQGIKGMWSL--------------RSSTDDPFDTFLVVSFISETRILAMNLEDEL 122
              VEL G KG+W++               ++ +D +  +L++S   E R + +   D L
Sbjct: 573 ITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISL--EARTMVLETADLL 630

Query: 123 EE-TEIEGFCSQTQTL 137
            E TE   +  Q +T+
Sbjct: 631 TEVTESVDYYVQGRTI 646


>gi|118346970|ref|XP_001006962.1| CPSF A subunit region family protein [Tetrahymena thermophila]
 gi|89288729|gb|EAR86717.1| CPSF A subunit region family protein [Tetrahymena thermophila SB210]
          Length = 1112

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 165/793 (20%), Positives = 322/793 (40%), Gaps = 123/793 (15%)

Query: 51   GQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFIS 109
             Q +  S   K+ S+ I + G+ + ++  ++    I+ M  + S        F+VVSF  
Sbjct: 371  NQRLIISSPRKEQSMNIFQKGMSLIQKGEIKFNSPIREMLVVHS-------VFIVVSFDF 423

Query: 110  ETRIL-----------AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV 158
            +T IL            MN+   L         S++Q L C          V++ S++L+
Sbjct: 424  QTLILKLDDKKGSFNVVMNINCGLLNVFALESSSESQKLVCL---------VSAQSIKLI 474

Query: 159  SSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEI 218
              T   + +E  +     + ++T N + ++ A    +L      +  +++V+        
Sbjct: 475  DLTRANILSEI-AISNKRIILSTINKNILITADSTNNLQAFNFLNNQISQVETFSYNSRY 533

Query: 219  SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEG 278
            S   IN      SY    AV +W    + + +  D     +  +  + + RS++   F  
Sbjct: 534  SYSAIN------SYGNYIAVALWFQSYIILINASDPTKTHQIDIPTQKVVRSLI---FHE 584

Query: 279  ISYLLCALGDG--HLLNFLLNMKTGELT--DRKKVSLGTQPIT---LRTFSSKNTTHVFA 331
             + LL    DG   L+ +  + +   +T  ++K + +G +P+    LR FSS      + 
Sbjct: 585  ENKLLIGYSDGIISLVYYSTDDQNNIVTSNNQKNMVIGYKPVKFRQLRLFSS------YC 638

Query: 332  ASDRPTVIY---------------SSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKE 376
             S  P  I                 S ++   +  N+++V+ +        P  L +AK+
Sbjct: 639  QSSTPACISCISNEVSILSLRKVDESYQRYQKTYFNIQDVNQIDEIEINGVP-YLIMAKK 697

Query: 377  GELTIGTIDDIQKLHIRSI--PLGEHPRRICHQE-----QSRTFAICSLKNQS---CAEE 426
              L+IG I+  QK HI S    + E     C  E     ++ + +I  ++N+        
Sbjct: 698  NCLSIGGIEVSQKFHIYSFGKDVKEQNEFRCQTELVDVIRNMSISISIVENEQDDVVCSN 757

Query: 427  SEMHFVR---LLDDQTFEFISTYPL----DTFEYGCSILSCSFSDDSNVYYCVGTAYVLP 479
              +H ++   LL    F     Y L    D F  G         + +  Y      Y++ 
Sbjct: 758  ILLHSIKNQDLLQQLKFNNTCIYSLLVVGDYFFIGGK------QEQNQTYEGFLQVYLVD 811

Query: 480  EENEPTKGRILVFIVEDGKLQLIAEKET-------KGAVYSLNAFNGKLLAAINQKIQLY 532
             EN+  +   L F +   ++Q  +E             +Y +   + +  + + Q  Q +
Sbjct: 812  NENKMIQVDKLAFKIPVMQIQKYSENSIAIILGHENFKIYQMPYTSAQEYSILKQNTQ-H 870

Query: 533  KWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERAR 592
            K++      +E+ S+   +   L+L    R   I++ D  + I L  ++ +   +   A+
Sbjct: 871  KFL------QEIVSQSNLNITALSLDCNKRNQ-ILIADRTQGIQL--FQEQNKKVMLAAK 921

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
                 + +  + L D+  + +++N N+   R+N     D ER +L V+   + G+ V   
Sbjct: 922  SPFPVFSTHAKFLGDENIVLSDSNTNIVIFRQNDFAENDFERMKLLVLSAINNGDIV--- 978

Query: 653  RHGSLVMRLPDSDVGQ-------IPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
               SL  ++   DV         +  VI+GT  G IGVI SL  + Y  L+ LQ ++ + 
Sbjct: 979  -ITSLRRKVNTKDVKDKYITTEGLDQVIYGTQKGWIGVIMSLNEQAYTVLQDLQESILQK 1037

Query: 706  IKGVGGLNHEQWRSFNN-EKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV----SV 760
             K     ++ +W+S  N  +   D  NF+DG++I   L +S++ + ++   M+     S+
Sbjct: 1038 FKCPLKFDYNKWKSIRNIPQSKSDKSNFIDGEIIFKVLKMSQSELVQVLDGMSAMPKPSI 1097

Query: 761  EELCKRVEELTRL 773
             E+ + +E L  L
Sbjct: 1098 AEMEQLIENLDLL 1110


>gi|239611898|gb|EEQ88885.1| protein CFT1 [Ajellomyces dermatitidis ER-3]
 gi|327352847|gb|EGE81704.1| CFT1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1402

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 63/435 (14%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 433
            R I LGE    + +   S T+ I + +  + +  E+ E+H                  V+
Sbjct: 970  RKIGLGEQVDIVEYSSSSETYVIGTSQKVDFNLPEDDEIHPEWRNEVISFLPQIDQGSVK 1029

Query: 434  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 488
            LL  +T+  I ++ L T E      C  L  S  + +      VGTA V   E+   +G 
Sbjct: 1030 LLSPRTWSIIDSHTLRTAERIMCVKCLDLEVSEITHERRDMIAVGTA-VTRGEDIAARGC 1088

Query: 489  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 535
            I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +    
Sbjct: 1089 IYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG-- 1146

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L++DG+    +      ++  L         ++GD +K I    Y  E   +   ++D  
Sbjct: 1147 LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGIWFAGYSEEPYKLSLFSKDDG 1206

Query: 596  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
               + A + L D   +Y L A+++ N+  ++ + E     +  RL     +H G F +  
Sbjct: 1207 TLQVMAADFLPDGKRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFHTGHFASTM 1266

Query: 653  RHGSLVMRL-------PDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 697
               +L+ R        PD++         G +  V+  +  G I +I  L    Y  L  
Sbjct: 1267 ---TLLPRTIIPSAQGPDANPDMMELDSSGPLYHVLVTSETGSIALITPLSETAYRRLSA 1323

Query: 698  LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
            LQ+ L   ++   GLN   +R+   E   +  +  +DGDL+  +LDL   R  EI+  + 
Sbjct: 1324 LQSQLINTLEHPCGLNPRAFRAI--ESDGIGGRGMVDGDLLHRWLDLGTQRKAEIAHRVG 1381

Query: 758  VSVEELCKRVEELTR 772
              + E+   +E + +
Sbjct: 1382 ADIWEIRADLEAIGK 1396


>gi|290981010|ref|XP_002673224.1| CPSF A subunit [Naegleria gruberi]
 gi|284086806|gb|EFC40480.1| CPSF A subunit [Naegleria gruberi]
          Length = 1373

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 103/528 (19%), Positives = 218/528 (41%), Gaps = 92/528 (17%)

Query: 329  VFAASDRPTVIYSSNKKL-LYSNVNLKEVSHMCPFNSAAFPDSLAI--------AKEGEL 379
            +F   ++P  +++ +  L ++   +   V+   P++    P              K+ +L
Sbjct: 849  LFKTGEKPFWLFTEHSNLRVHPTQSRDPVTTFTPYHHENCPHGFIYLTDKEQDNKKQSKL 908

Query: 380  TIGTIDDIQKLHI----RSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEES------- 427
             I +++   K +     R I L   P  I  HQ+ +   A  S+  ++   +S       
Sbjct: 909  HISSLNANVKFNAYWPQRKILLKSTPNVITFHQDTNTCLAFTSVPVKAILPDSIPFPEGK 968

Query: 428  ------EMHFVRLLDDQTFEFISTYPLDTFEYGCS-----ILSCSFSDDSNVYY------ 470
                  + H V+L     ++ +  +  D  E   +     +    ++DD+++ +      
Sbjct: 969  CPPPAEQKHTVKLFSGHNWQEMDKFEFDLHESAVAAKVVYLSKEEYNDDTDISFEEPLNS 1028

Query: 471  ---------CVGTAYVLPEENEPTKGRILVFIVE-------DGKLQLIAEKETKGAVYSL 514
                      VGTAYV   E E  +GR+L+F ++       + KL LI+    KG + +L
Sbjct: 1029 RKQDLVSVVAVGTAYV-QSERELCRGRLLLFDLDPILGRENEYKLNLISSTSVKGPITTL 1087

Query: 515  NAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKS 574
               +  ++ ++  +I  Y +   D   + +     +        + T  +FI+ GD+ KS
Sbjct: 1088 EQVDRYIICSVGNRIYTYYF---DWEEKRMHITSFYDTQFYTASLNTVRNFIMFGDIYKS 1144

Query: 575  ISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGA 629
            +S L +K +   +   A+D     + + E L ++  LG        N  +F+     + +
Sbjct: 1145 VSFLRWKEKGHRLILLAKDNRPLQVVSSEFLVNNDLLGLAVIDTSKNLQIFSYLPQHQES 1204

Query: 630  TDEERGR-LEVVGEYHLGEFVNRFRHGSLVMRLPDSD------VGQIPT----------- 671
             D   GR L  V ++H+G  +N       V  LPD +      V + P            
Sbjct: 1205 ND---GRNLVPVCDFHIGTLINSLIRMK-VRELPDDNTIRLGNVNEKPKQSGKKDITKTN 1260

Query: 672  -----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT 726
                 ++FG+V+G IG +A +    +  L  LQ  +   ++   GL+ + +R +   ++T
Sbjct: 1261 PNHQFILFGSVDGAIGYVAPINEVTHRRLFALQLKMYTQLEQAAGLHPKSFRLYKPLERT 1320

Query: 727  V--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
                 KN +DG LI ++ +++     ++++ +  + + + + ++EL +
Sbjct: 1321 EYNYKKNIIDGQLIWNYANINTILQRDLARQIGTNSDNILRSIQELNQ 1368



 Score = 45.8 bits (107), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 32/249 (12%)

Query: 31  YVNLGPIVDFCVV-----DLE------RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQAS 79
           + N+GPI           D+          Q   + CSG  + G L ++   +  + Q+ 
Sbjct: 477 FTNIGPISHLTAAVTSSFDMSGFKSKTNDNQLSAIACSGIGRHGCLTVLNRSLQPDIQSE 536

Query: 80  VELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF 138
             L   +K +W++   T+   D +L++S   +T++     +  L E   +      +T  
Sbjct: 537 ATLPFLVKQVWTISQKTEH--DLYLILSLEDKTKVFES--KATLAEVTSKSMFVTNETTL 592

Query: 139 CHDAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVY 198
               I   +VQVT  SV L+ S  +++ +  K      +  +      VLL    G LV 
Sbjct: 593 NIGKIRESIVQVTRKSVMLIGSEPKQVHHSKKE-----IRSSIILDPYVLLHFYDGSLVL 647

Query: 199 LEIGDGILT------EVKHAQLEYEISCLDINP----IGENPSYSQIAAVGMWTDISVRI 248
           L   +G +T      E  H ++   +     NP     G N    +      WTD +  I
Sbjct: 648 LTHDNGRVTSKQLDIESNHGKIT-AVCLYKTNPEFEFFGINEKEGKYLCCVYWTDGAFEI 706

Query: 249 FSLPDLNLI 257
            S+PD+  +
Sbjct: 707 LSVPDMTCV 715


>gi|238508528|ref|XP_002385456.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus flavus NRRL3357]
 gi|220688975|gb|EED45327.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Aspergillus flavus NRRL3357]
          Length = 1204

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 64/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 432
            I+ IP+GE    + +   S  + I +         E+ E+H                  +
Sbjct: 772  IQQIPIGEQVDHLAYSSSSGMYVIGTSHRTEFKLPEDDELHPEWRNEMTSFFPEVQRSSL 831

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +++  +T+  I +Y L   E+  ++ + S     N +       VGTA+   E+   ++G
Sbjct: 832  KVVSPKTWTVIDSYLLSPAEHVMAVKNMSLEISENTHERKDMIVVGTAFARGEDIA-SRG 890

Query: 488  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             + VF V            D KL+L+ ++  KGAV +L+   G+    + Q  +     L
Sbjct: 891  CVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQGFLIVAQGQKCIVRGL 950

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      H+  +         ++ D +K +    Y  E   +   A+D + 
Sbjct: 951  KEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGYSEEPYKMSLFAKDLDY 1010

Query: 597  NWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              + A + L D      L A+++ NL  ++ + E        RL    ++H G F+    
Sbjct: 1011 LEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFHTGNFI---- 1066

Query: 654  HGSLVMRLPDSDVG---------------QIP--TVIFGTVNGVIGVIASLPHEQYLFLE 696
              S +  LP + V                +IP   ++  + NG +G++  +  E Y  L 
Sbjct: 1067 --STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGSVGLVTCVSEESYRRLS 1124

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQ+ L   I+   GLN   +R+   E      +  LDG L+  +LD+S+ R  EI+  +
Sbjct: 1125 ALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQWLDMSKQRKVEIASRV 1182

Query: 757  NVSVEELCKRVEELT 771
              +  E+    E ++
Sbjct: 1183 GANEWEIKADFEAIS 1197


>gi|261201748|ref|XP_002628088.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
 gi|239590185|gb|EEQ72766.1| protein CFT1 [Ajellomyces dermatitidis SLH14081]
          Length = 1403

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 63/435 (14%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLK--NQSCAEESEMH-----------------FVR 433
            R I LGE    + +   S T+ I + +  + +  E+ E+H                  V+
Sbjct: 971  RKIGLGEQVDIVEYSSSSETYVIGTSQKVDFNLPEDDEIHPEWRNEVISFLPQIDQGSVK 1030

Query: 434  LLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTKGR 488
            LL  +T+  I ++ L T E      C  L  S  + +      VGTA V   E+   +G 
Sbjct: 1031 LLSPRTWSIIDSHTLRTAERIMCVKCLDLEVSEITHERRDMIAVGTA-VTRGEDIAARGC 1089

Query: 489  ILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYKWM 535
            I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +    
Sbjct: 1090 IYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG-- 1147

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L++DG+    +      ++  L         ++GD +K I    Y  E   +   ++D  
Sbjct: 1148 LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGIWFAGYSEEPYKLSLFSKDDG 1207

Query: 596  ANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
               + A + L D   +Y L A+++ N+  ++ + E     +  RL     +H G F +  
Sbjct: 1208 TLQVMAADFLPDGKRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFHTGHFASTM 1267

Query: 653  RHGSLVMRL-------PDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEK 697
               +L+ R        PD++         G +  V+  +  G I +I  L    Y  L  
Sbjct: 1268 ---TLLPRTIIPSAQGPDANPDMMELDSSGPLYHVLVTSETGSIALITPLSETAYRRLSA 1324

Query: 698  LQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMN 757
            LQ+ L   ++   GLN   +R+   E   +  +  +DGDL+  +LDL   R  EI+  + 
Sbjct: 1325 LQSQLINTLEHPCGLNPRAFRAI--ESDGIGGRGMVDGDLLHRWLDLGTQRKAEIAHRVG 1382

Query: 758  VSVEELCKRVEELTR 772
              + E+   +E + +
Sbjct: 1383 ADIWEIRADLEAIGK 1397


>gi|195583398|ref|XP_002081509.1| GD25678 [Drosophila simulans]
 gi|194193518|gb|EDX07094.1| GD25678 [Drosophila simulans]
          Length = 1450

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 64/404 (15%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSL-------------KNQSCAEESE-MHFVR---- 433
            +R +PL   PR++ +  ++R + + +              +++  +EES    F+     
Sbjct: 1026 VRKVPLRCTPRQLVYHRENRVYCLITQTEEPMTKYYRFNGEDKELSEESRGERFIYPIGS 1085

Query: 434  -----LLDDQTFEFISTYPLDTFE-----YGCSILSCSFSDDSN---VYYCVGTAYVLPE 480
                 L+  +T+E +    + TFE         I+  S+    +    Y C+GT +    
Sbjct: 1086 QFEMVLISPETWEIVPDASI-TFEPWEHVTAFKIVKLSYEGTRSGLKEYLCIGTNFNY-S 1143

Query: 481  ENEPTKGRILVF-----IVEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+  ++G I ++     + E GK      ++ I +KE KG V +++   G L+  + QKI
Sbjct: 1144 EDITSRGNIHIYDIIEVVPEPGKPMTKFKIKEIFKKEQKGPVSAISDVLGFLVTGLGQKI 1203

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
              Y W LRD    +L        +I    + T    I + D+ KSISLL ++ E   +  
Sbjct: 1204 --YIWQLRDG---DLIGVAFIDTNIYVHQIITVKSLIFIADVYKSISLLRFQEEYRTLSL 1258

Query: 590  RARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYH 644
             +RD+N   +  +E + D+  LG     AE N  ++  +  +  +   ++  L    +YH
Sbjct: 1259 ASRDFNPLEVYGIEFMVDNSNLGFLVTDAERNLIVYMYQPEARESLGGQK--LLRKADYH 1316

Query: 645  LGEFVNR-FR----HGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
            LG+ VN  FR       L  R P     +   V++GT++G +G    LP + Y     LQ
Sbjct: 1317 LGQVVNTMFRVQCHQKGLHQRQPFLYENK-HFVVYGTLDGALGYCLPLPEKVYRRFLMLQ 1375

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKK--TVDAKNFLDGDLIESF 741
              L    + + GLN +++R+  + KK     ++  +DGDLI S+
Sbjct: 1376 NVLLSYQEHLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSY 1419



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 26  EVLERYVNLGPIVDFCV---VDLERQG-------------QGQVVTCSGAYKDGSLRIVR 69
           EV +  +N+ PI   C    V+ E  G             + ++V  +G  K+G+L +  
Sbjct: 485 EVCDSLMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFV 544

Query: 70  NGIGINEQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELE 123
           N +      S EL G   +W++      +SS +D  D F+++S  + T  L +    E+ 
Sbjct: 545 NCLNPQIITSFELDGCLDVWTVFDDATKKSSRNDQHD-FMLLSQRNST--LVLQTGQEIN 601

Query: 124 ETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           E E  GF     T+F  +    + +VQVT+  VRL+  T
Sbjct: 602 EIENTGFTVNQPTIFVGNLGQQRFIVQVTTRHVRLLQGT 640


>gi|449661926|ref|XP_002167992.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Hydra magnipapillata]
          Length = 1122

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 30/325 (9%)

Query: 469  YYCVGTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAF 517
            Y  VGT +    E+   KGRIL+F     + E G      K + + +KE KG V ++ A 
Sbjct: 802  YLVVGTTFNY-GEDLACKGRILIFDVLEVVPEPGQPLTKTKCKCVYDKEQKGPVTAICAT 860

Query: 518  NGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISL 577
            +G ++AA+ QKI  +K+  +D+   +L         +  + +    + IV  D+ +SISL
Sbjct: 861  SGYIIAAVGQKIYAFKY--KDN---DLVGVAFVDSQVFTVNLMAIRNVIVAADISRSISL 915

Query: 578  LIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDE 632
            + ++ E  ++   +RD         E   D   +G     AE N  +F+ +   E     
Sbjct: 916  VRFQVEHKSLALVSRDTKTLEAYTSEFFIDGSQVGFVVSDAERNIVIFSYQ--PEALESF 973

Query: 633  ERGRLEVVGEYHLGEFVNRFRHGSLV---MRLPDSDVGQIPTVIFGTVNGVIGVIASLPH 689
               RL    + ++G  VN      L+     L  S   Q   +I  T++G IG++  L  
Sbjct: 974  GGHRLLQKADINIGSHVNTMMRIKLIQDEQSLSKSS-EQRQLIILPTLDGSIGILFPLSE 1032

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTV--DAKNFLDGDLIESFLDLSRT 747
            + +  L  LQ  L   +    GLN   +R+ +   +T+    +N LDG L++ +  LS  
Sbjct: 1033 KPFRRLTMLQNKLVDCLPHKAGLNPRAFRALDVPLRTLTNPHRNILDGQLLDKYAQLSFQ 1092

Query: 748  RMDEISKTMNVSVEELCKRVEELTR 772
               +I+K M  +  ++   + ++ R
Sbjct: 1093 ERFDIAKKMGTTSGQILDDMMDIER 1117



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 14/173 (8%)

Query: 47  RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSL--RSSTD--DPFDTF 102
           RQ   ++V CSG  K+G+L +++  I      + EL G   MW++  +SS +  + + ++
Sbjct: 458 RQIDLEMVCCSGYGKNGTLTVLQRSIRPQVVTTFELPGCVNMWTVCGKSSKESVENYHSY 517

Query: 103 LVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLVSST 161
           L++S    T +L      E+ E +  GF  Q  T+F  + + N+ ++QV   S+ L+  T
Sbjct: 518 LILSRDDSTMVLKTGA--EITELDNSGFNVQQPTIFACNHLSNKYILQVCPQSIHLLEDT 575

Query: 162 SRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI-----GDGILTEV 209
            +   N         +   + +   V++    G L+YL++     G+G ++ +
Sbjct: 576 VQ--INSISLQDTIKITQCSISDPYVVMVDSTGQLIYLQVIEDSEGNGKISSI 626


>gi|317157892|ref|XP_001826637.2| protein cft1 [Aspergillus oryzae RIB40]
 gi|391864317|gb|EIT73613.1| mRNA cleavage and polyadenylation factor II complex, subunit CFT1
            [Aspergillus oryzae 3.042]
          Length = 1389

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 176/435 (40%), Gaps = 64/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 432
            I+ IP+GE    + +   S  + I +         E+ E+H                  +
Sbjct: 957  IQQIPIGEQVDHLAYSSSSGMYVIGTSHRTEFKLPEDDELHPEWRNEMTSFFPEVQRSSL 1016

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +++  +T+  I +Y L   E+  ++ + S     N +       VGTA+   E+   ++G
Sbjct: 1017 KVVSPKTWTVIDSYLLSPAEHVMAVKNMSLEISENTHERKDMIVVGTAFARGEDIA-SRG 1075

Query: 488  RILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             + VF V            D KL+L+ ++  KGAV +L+   G+    + Q  +     L
Sbjct: 1076 CVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQGFLIVAQGQKCIVRGL 1135

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      H+  +         ++ D +K +    Y  E   +   A+D + 
Sbjct: 1136 KEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGYSEEPYKMSLFAKDLDY 1195

Query: 597  NWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              + A + L D      L A+++ NL  ++ + E        RL    ++H G F+    
Sbjct: 1196 LEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFHTGNFI---- 1251

Query: 654  HGSLVMRLPDSDVG---------------QIP--TVIFGTVNGVIGVIASLPHEQYLFLE 696
              S +  LP + V                +IP   ++  + NG +G++  +  E Y  L 
Sbjct: 1252 --STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGSVGLVTCVSEESYRRLS 1309

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQ+ L   I+   GLN   +R+   E      +  LDG L+  +LD+S+ R  EI+  +
Sbjct: 1310 ALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQWLDMSKQRKVEIASRV 1367

Query: 757  NVSVEELCKRVEELT 771
              +  E+    E ++
Sbjct: 1368 GANEWEIKADFEAIS 1382


>gi|240277254|gb|EER40763.1| cleavage factor two protein 1 [Ajellomyces capsulatus H143]
          Length = 1408

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 181/434 (41%), Gaps = 61/434 (14%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 431
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 976  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 1033

Query: 432  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 486
            V+LL  +T+  I +Y L   E      C  L  S  + +      VGTA +   E+   +
Sbjct: 1034 VKLLTPRTWSIIDSYNLRNAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 1092

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 1093 GCIYIFEVIKVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG 1152

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1153 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1210

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1211 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1270

Query: 651  RF----RHGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1271 TMTLLPRTATSSSQGPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1330

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1331 QSQLANTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1388

Query: 759  SVEELCKRVEELTR 772
             V E+   +E + +
Sbjct: 1389 DVWEIRADLEAIGK 1402


>gi|225558298|gb|EEH06582.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1408

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 181/434 (41%), Gaps = 61/434 (14%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 431
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 976  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 1033

Query: 432  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 486
            V+LL  +T+  I +Y L   E      C  L  S  + +      VGTA +   E+   +
Sbjct: 1034 VKLLTPRTWSIIDSYNLRNAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 1092

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 1093 GCIYIFEVIEVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG 1152

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +    Y  E   +   ++D
Sbjct: 1153 --LKEDGSLLPVAFMDMQCYVNVLKELKGTGMCIMGDALKGLWFAGYSEEPYKLSLFSKD 1210

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++ N+  ++ + E     +  RL     +  G F +
Sbjct: 1211 DGTLQVMAADFLPDGNRLYILVADDDCNIHVLQYDPEDPGSSKGDRLLHRSTFQTGHFAS 1270

Query: 651  RF----RHGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1271 TMTLLPRTATSSSQGPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1330

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1331 QSQLTNTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1388

Query: 759  SVEELCKRVEELTR 772
             V E+   +E + +
Sbjct: 1389 DVWEIRADLEAIGK 1402


>gi|212541400|ref|XP_002150855.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces marneffei ATCC 18224]
 gi|210068154|gb|EEA22246.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces marneffei ATCC 18224]
          Length = 1383

 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 176/429 (41%), Gaps = 52/429 (12%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 432
            IR IPL E    + +   S T+ + +   Q     ++ E+H                  +
Sbjct: 951  IRRIPLNEQVDHLAYSTASGTYVVGTTHEQDFKLPDDDELHPEWATEEISLLPKVAYGSI 1010

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSI--LSCSFSDDSNV---YYCVGTAYVLPEENEPTKG 487
            +L++ +T++ I +Y     E   ++  ++   S+ +        VGT Y    E+   +G
Sbjct: 1011 KLINPKTWKVIDSYTFSPAERITAVENINLEISEKTGKRKDMIVVGTTYA-KGEDIAARG 1069

Query: 488  RILVFIVEDG-----------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             + VF V D            KL+LI E+  +GAV +++   G+    + Q  +     L
Sbjct: 1070 NVYVFDVIDVVPDPDEPGTNLKLKLIGEESIRGAVTAVSGIGGQGFMIVAQGQKCMVRGL 1129

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            +DDG+    +      ++  +         ++GD  K +    Y  E   +    +D + 
Sbjct: 1130 KDDGSLLPVAFIDVQCYVSVIKELKGTGMCLIGDAFKGLWFTGYSEEPYKMTLFGKDLDE 1189

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              +   + L D   +Y L A+ + NL+ ++ + E        RL    ++H+G F +   
Sbjct: 1190 LEVVTADFLPDGKKLYILVADGDCNLYVLQYDPEDPKSSNGDRLLNRCKFHMGHFASTLT 1249

Query: 654  -------HGSLVMRLPDS-DVGQIPTV---IFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
                      L +   DS D+     +   +  T +G + +I SL  E Y  L  LQ+ L
Sbjct: 1250 LLPRTAVSSELAVMSSDSMDIDSYTPLYQALITTQSGSMALITSLSEESYRRLTALQSQL 1309

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++   GLN   +RS   E   V  +  +DG L+  +LDLSR+R  EI+  +     E
Sbjct: 1310 SNTLEHPCGLNPRAYRSV--ESDGVVGRGMIDGKLLMRWLDLSRSRKLEIAGRVGADEWE 1367

Query: 763  LCKRVEELT 771
            +   +E ++
Sbjct: 1368 IRADLEAVS 1376


>gi|389609725|dbj|BAM18474.1| spliceosomal protein sap [Papilio xuthus]
          Length = 367

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 40/268 (14%)

Query: 485 TKGRILVFIV--EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTR 542
           T+G + V+ +    GKL+L+ +        +L AFNGKL+A + + +++Y     D G R
Sbjct: 112 TEGSLHVYKIFSNTGKLELVHKTPIDDYPGALAAFNGKLMAGVGRMLRMY-----DIGRR 166

Query: 543 ELQSEC-GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
           +L  +C   H   L   ++T G  I V D+ +S+  + YK  E  +   A D N  W++ 
Sbjct: 167 KLLRKCENRHIPNLIADIKTIGQRIFVADVQESVFCVKYKKRENQLIIFADDTNPRWITN 226

Query: 602 VEILDDDIYLGAENNFNLFTVRKNSEGATDE------------ERGRL-------EVVGE 642
             +LD D  +   + F   +V +     +D+            +RG L       E+V  
Sbjct: 227 TCVLDYDT-VAMSDKFGNVSVMRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKGEIVVN 285

Query: 643 YHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP---HEQYLFLEKLQ 699
           +H+GE V   +  +L+        G    +++ T++G +GV+  LP    E + F + L+
Sbjct: 286 FHVGETVASLQRATLI-------PGGSEALLYATISGALGVL--LPFTSREDHDFFQHLE 336

Query: 700 TNLRKVIKGVGGLNHEQWRSFNNEKKTV 727
            ++R     + G +H  +RS+    K V
Sbjct: 337 MHMRSENSPLCGRDHLSFRSYYYPVKNV 364


>gi|384487281|gb|EIE79461.1| hypothetical protein RO3G_04166 [Rhizopus delemar RA 99-880]
          Length = 1468

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 156/372 (41%), Gaps = 50/372 (13%)

Query: 426  ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPE 480
            E E   + L+   T+E +     + FE  C  L C+  D         YY +     L  
Sbjct: 1099 EMEQFSMILVSPVTWEIVDKVEFEEFEQ-CFSLECALLDSKQTSTGRKYYMIIGTGTLKG 1157

Query: 481  ENEPTKGRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKI 529
            E+   KG I ++ I+E          + K + +  ++ KGAV ++   +G L A I  K+
Sbjct: 1158 EDTTMKGSIRMYDIIEVVPEPDNPQTNHKFKPVLTEDVKGAVTAMCTVSGHLAACIGSKV 1217

Query: 530  QLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE 589
             +  W L DD    L         I    + +  +FI++GD  KSI  L ++ E   +  
Sbjct: 1218 IV--WSLEDD--ERLVGVAFIDVQIYVTSMSSIKNFILIGDAQKSIWFLGFQLEPAKLTL 1273

Query: 590  RARDYNANWMSAVEILDDD--IYL--GAEN-NFNLFTVRK---NSEGATDEERGRLEVVG 641
              +DY +  +  V+ + DD  +YL  G  N N +L+        S G       +L   G
Sbjct: 1274 LGKDYQSFDVGCVDFIIDDKSLYLIVGDTNENIDLYQYAPFNLQSFGGQ-----KLMRRG 1328

Query: 642  EYHLGEFVNRFRHGSLVMRLPD-------SDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 694
            ++H+G  V        ++RLP         +  +    + GT NG I VI+S+  + +  
Sbjct: 1329 DFHVGSQVQT------MVRLPQIEKTEKGFEYSRRHFCLCGTFNGSIAVISSISEKTFKR 1382

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK---TVDAKNFLDGDLIESFLDLSRTRMDE 751
            L  L  +L   ++ V GLN   +R     K+   T   K  LDGDLI  F  LS     E
Sbjct: 1383 LNTLYGHLVNNLQHVAGLNPRAFRLIKGPKQRMSTNRTKAVLDGDLIFEFAGLSIEEQKE 1442

Query: 752  ISKTMNVSVEEL 763
             +K +  +V  +
Sbjct: 1443 TTKQIGTTVTRI 1454



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)

Query: 27  VLERYVNLGPIVDFCVVDL------ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASV 80
           V +  +N GPIVD  V D+      E   Q ++V+ SG  K+G+L + +  I      + 
Sbjct: 474 VCDTMLNTGPIVDMAVGDVDTVEQQEDWPQLELVSSSGHGKNGALCVFQRHIYPQTSFAF 533

Query: 81  ELQGIKGMWSLR-------SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQ 133
                + +WS++        + DD FD  L +S    T +L+    DEL+E +  GF ++
Sbjct: 534 HQFDSQAIWSIKCRKNDQQQNEDDDFDKLLFISKSKSTLVLSAG--DELQEVKT-GFYTR 590

Query: 134 TQTLFCH---DAIYNQLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
             T+      DA   ++VQV +  V +++   + ++     P G  +  A+ +   +LL 
Sbjct: 591 GSTIAVSTLFDA--TRIVQVYATGVMVLTPEGKRIQT-VPIPRGAKIVEASIHDPYILLT 647

Query: 191 TGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 223
                ++ L+ GD    ++ H QL   I  + I
Sbjct: 648 LDNNKILALQ-GDASTKDIIHIQLPNHIKDVGI 679


>gi|440793679|gb|ELR14857.1| CPSF A subunit region protein [Acanthamoeba castellanii str. Neff]
          Length = 1477

 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 66/424 (15%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAIC----------------------------------- 416
            +R +PLG  PR I +   SRT+ +                                    
Sbjct: 1053 VRKVPLGRTPREIAYHPPSRTYVVALATPVTTVVPTPPETDMERQEREREEEESREMGIE 1112

Query: 417  ------SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDD-SNVY 469
                   +  +  A   E H + L+  +T++ +    L+  E+  ++      D+ S V 
Sbjct: 1113 PEEKQRDMGPREIAMMEERHELHLISPRTWQILHHVELEPKEHVLTLSVLKLGDNYSQVN 1172

Query: 470  YCVGTAYVLPEENEPTKGRILVFIVEDGKLQL-----IAEKETKGAVYSLNAFNGKLLAA 524
              +   ++L  E       I V   E  KL +     + EK  KG V +  +  G L+ A
Sbjct: 1173 RELRPPHLLIYE-------IDVTGEEQCKLTMAYQKPMKEKPMKGPVSAAASLQGYLIIA 1225

Query: 525  INQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE 584
            +  KI ++ +   D G+ E  +      +I++  ++T  +F++ GD+ KSI  L +K   
Sbjct: 1226 VGPKIWVFNF---DGGSTEAVAFYDAPHYIVS--IKTLKNFVLCGDIYKSIFFLRWKDSA 1280

Query: 585  GAIEERARDYNANWMSAVEILDD--DIYLGAENNFNLFTVRKNSEGATDEERGRLEVV-G 641
              +   A+D     + A E + D  ++ L   +      V   +    +   G+L V  G
Sbjct: 1281 SQLALLAKDVGRVSVFATEYVVDKQNLALLMSDERQNLQVTAYAPHTAESRGGQLLVPRG 1340

Query: 642  EYHLGEFVNRFRHGSLVMRLPDSDVG-QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQT 700
            ++++G+ +N+F    L M LP      Q   + FGT++G +G +A +    +  L  LQ+
Sbjct: 1341 DFNVGQSINKFVR--LPMTLPSGTTSLQRHALWFGTLSGGVGYLAPMDESVFRRLGMLQS 1398

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTMNVS 759
             L   I    GL+ + +R+   E+   + K+  LDG L+  +L L      +I+  +  S
Sbjct: 1399 ALLSAIPHTAGLHPQAYRALQRERLLRNRKHTILDGLLLSRYLALDSATQQQIALKLGTS 1458

Query: 760  VEEL 763
             E +
Sbjct: 1459 RERI 1462



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 18/121 (14%)

Query: 26  EVLERYVNLGPIVDFCVVD---------LERQGQG--QVVTCSGAYKDGSLRIVRNGIGI 74
           +V +  VN+GPI DF + +          E++GQ   ++VTCSG  K+GSL ++++G+  
Sbjct: 530 KVCDSLVNVGPITDFAIGESFDPASVSMAEQEGQRSVEIVTCSGQGKNGSLCVLQHGVRP 589

Query: 75  N-EQASVELQGIKGMWSL------RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEI 127
               AS +L G K  W+L      R   +  +  +L++S   +TR++A +  DEL   E 
Sbjct: 590 ELVHASADLAGCKAFWTLYHRSEERQGEEAEYHAYLLLSEEEQTRVIAGDGLDELSNEET 649

Query: 128 E 128
           +
Sbjct: 650 D 650


>gi|255948500|ref|XP_002565017.1| Pc22g10080 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592034|emb|CAP98296.1| Pc22g10080 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1392

 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 158/375 (42%), Gaps = 45/375 (12%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTK 486
            ++++  +T+  I +YPLD  E   ++ + +     N +       VGTA ++  E+ P +
Sbjct: 1019 IKVVSPKTWTIIDSYPLDPDEQVTAVKNVNIEVSENTHERRDLIVVGTA-IVKGEDMPAR 1077

Query: 487  GRILVFIV----------EDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            G I VF V          E G KL+LI ++  KGAV +L+   G+    + Q  +     
Sbjct: 1078 GTIYVFDVIKVAPDPEKPETGHKLKLIGKESVKGAVTALSGIGGQGFVIVAQGQKCMVRG 1137

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L++DG+    +      ++           +++GD +K +    Y  E   +    +D  
Sbjct: 1138 LKEDGSLLPVAFMDMQCYVTVAKELKGTGLVILGDAVKGLWFAGYSEEPYRMTLFGKDPE 1197

Query: 596  ANWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
               + A + L D   +Y L A+++ NL  ++ + E        RL    +++ G F    
Sbjct: 1198 YLEVVAADFLPDGNKLYMLVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFYTGNF---- 1253

Query: 653  RHGSLVMRLPDSDVGQIPT-----------------VIFGTVNGVIGVIASLPHEQYLFL 695
               S V  LP + V    T                 V+  + NG + ++ S+  E Y  L
Sbjct: 1254 --ASSVTLLPRTAVSSERTESSEEGMDLDETFARHQVLIASQNGSLALVTSVAEESYRRL 1311

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
              LQ+ L   +    GLN   +R+   E      +  +DG+L+  +L++ + R  EI+  
Sbjct: 1312 SALQSQLINTVDHPAGLNPRAFRAI--ESDGAAGRGMVDGNLLRLWLNMGKQRQTEIAGR 1369

Query: 756  MNVSVEELCKRVEEL 770
            +  +  E+   +E +
Sbjct: 1370 VGATEWEIKADLETI 1384


>gi|384946686|gb|AFI36948.1| cleavage and polyadenylation specificity factor subunit 1 [Macaca
            mulatta]
          Length = 1428

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 142/346 (41%), Gaps = 55/346 (15%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDI----QKLHIRSIPLGEHPRRICHQEQS 410
            V    PF++   P   L   ++GEL I  +           +R IPL      + +  +S
Sbjct: 971  VDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVES 1030

Query: 411  RTFAICSLKNQSCAE-----------------------ESEMHFVRLLDDQTFEFI--ST 445
            + +A+ +  N  CA                        + E   ++L+   ++E I  + 
Sbjct: 1031 KVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNAR 1090

Query: 446  YPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVE 495
              L  +E+   + + S   +  V     Y   GT  +  EE    +GRIL+      + E
Sbjct: 1091 IELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVT-CRGRILIMDVIEVVPE 1149

Query: 496  DG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
             G      K +++ EKE KG V +L   NG L++AI QKI L  W LR     EL     
Sbjct: 1150 PGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFL--WSLR---ASELTGMAF 1204

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                +    + +  +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 1205 IDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 1264

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
             LG   ++ + NL       E        RL    ++H+G  VN F
Sbjct: 1265 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTF 1310



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  + +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 464 EVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQV 523

Query: 77  QASVELQGIKGMWSL-----RSSTDDP-------------------FDTFLVVSFISETR 112
             + EL G   MW++     +   D+P                      FL++S    T 
Sbjct: 524 VTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLILSREDSTM 583

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 584 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 628


>gi|242798830|ref|XP_002483249.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218716594|gb|EED16015.1| cleavage and polyadenylation specificity factor subunit A, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1382

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/435 (21%), Positives = 177/435 (40%), Gaps = 64/435 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 432
            IR IPL E    + +   S T+ + +   Q     +  E+H                  +
Sbjct: 950  IRKIPLNEEVDYLAYSTVSGTYVVGTTHEQDFKLPDNDELHPEWANEDISLRPKVAQGSI 1009

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTKG 487
            +LL+ +T++ I +Y  +  E   +I + +      + +      VGT +    E+   +G
Sbjct: 1010 KLLNPKTWKVIDSYTFNAAERITAIENINLEISEKTSERKDMIVVGTTFA-KGEDIAARG 1068

Query: 488  RILVFIV--------EDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             + VF V        E G   KL+LI E+  +GA+ +++   G+    + Q  +     L
Sbjct: 1069 NVYVFDVINVVPDPDEPGTNLKLKLIGEESVRGALTAVSGIGGQGFLIVAQGQKCMVRGL 1128

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            +DDG+    +      ++  +         ++GD +K +    Y  E   +    +D + 
Sbjct: 1129 KDDGSLLPVAFIDVQCYVSVIKELKGTGMCLIGDALKGLWFTGYSEEPYKMTLFGKDLDE 1188

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              +   + L D   +Y L A+++ NL  ++ + E        RL    ++H+G F     
Sbjct: 1189 LEVVTADFLPDGKKLYILVADSDCNLHVLQYDPEDPKSSNGDRLLNRCKFHMGHF----- 1243

Query: 654  HGSLVMRLPDSDVGQ---------------IP--TVIFGTVNGVIGVIASLPHEQYLFLE 696
              S +  LP + V                 IP    +  T +G++ ++ SL  E Y  L 
Sbjct: 1244 -ASTITLLPRTAVSSELAVMNSDSMDIDSYIPLHQALITTQSGLMALVTSLSEESYRRLS 1302

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQ+ L   ++   GLN   +R+   E   V  +  +DG L+  +LDLSR R  EI+  +
Sbjct: 1303 ALQSQLSNTLEHPCGLNPRAYRAV--ESDGVVGRGMIDGKLLMRWLDLSRPRKLEIAGRV 1360

Query: 757  NVSVEELCKRVEELT 771
                 E+   +E ++
Sbjct: 1361 GADEWEIRADLEAVS 1375


>gi|145348791|ref|XP_001418827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579057|gb|ABO97120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1386

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 182/430 (42%), Gaps = 45/430 (10%)

Query: 365  AAFPDSLAIAKEGELTIGTIDDIQKLH--IRSIPLGEHPRRICHQEQSRTFAICSLKNQS 422
            AA+P      K    TI  + D  KL+  + S P+    R I  Q+     A+  ++ + 
Sbjct: 947  AAWPVRKVALKCTPHTITYLPDF-KLYALVTSAPVPWVEREI-EQDNVHGIALAKVRRER 1004

Query: 423  CAEESEMHF---VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN----VYYCVGTA 475
                 +M     VRLL   + +    + L+  E+   + +    D +         VGTA
Sbjct: 1005 AKANDDMELQYSVRLLVPGSLDSAWQHALEPGEHVQCVRNVQLRDINTGALLSLLAVGTA 1064

Query: 476  YVLPE-ENEPTKGRILVFIV--------EDG---KLQLIAEKETKGAVYSLNAFNGKLLA 523
              +P  E+ P +GR+++F +         DG   K Q+   +E K A  +L+A +G L+ 
Sbjct: 1065 --MPGGEDTPCRGRVILFQMVWERDAESMDGYRWKGQVCCVREAKMACTALSALDGHLIV 1122

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
            A+  K+ ++ W    DG  EL S       I  + +    +FI+VGDL K +    +K  
Sbjct: 1123 AVGTKLTVHTW----DGV-ELNSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFRWKAN 1177

Query: 584  --EGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLE 638
              E +I + ++D++   + + E L D      LG++ + N      + +     +  +L 
Sbjct: 1178 GFEKSIIQLSKDFDRMDVVSTEFLIDGATLSLLGSDMSGNARIFGYDPKSLESWKGQKLL 1237

Query: 639  VVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP------TVIFGTVNGVIGVIASLPHEQY 692
            V   YH+G  ++R    ++      +  G+ P       V FGT++G +G+        Y
Sbjct: 1238 VRSAYHVGSPISRMVRFNVEGTTAKAAPGERPKGTNRHAVFFGTLDGALGIFMPTDEPTY 1297

Query: 693  LFLEKLQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDAK-NFLDGDLIESFLDLSRTR 748
              L  LQ  L   ++   G N   +R+   F  +   + A  + LDG L+  F  L+ T 
Sbjct: 1298 AKLHALQRELNTTVRSPIGCNPRTFRTPKVFEGKHVQLLAPLDVLDGGLLSKFETLTFTE 1357

Query: 749  MDEISKTMNV 758
               +++   V
Sbjct: 1358 QRAVAERSGV 1367


>gi|425765419|gb|EKV04111.1| Cleavage and polyadenylation specificity factor subunit A, putative
            [Penicillium digitatum Pd1]
 gi|425767100|gb|EKV05682.1| Cleavage and polyadenylation specificity factor subunit A, putative
            [Penicillium digitatum PHI26]
          Length = 1271

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 92/434 (21%), Positives = 176/434 (40%), Gaps = 64/434 (14%)

Query: 392  IRSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMH-----------------FV 432
            +R +P+ E    + +   S T+ + + +       E  E+H                  +
Sbjct: 839  LRKVPIEEQVNFLAYSTSSETYVLGTSRQGDFKLPEGDELHPEWRNEELSFCPKIPESSI 898

Query: 433  RLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVY-----YCVGTAYVLPEENEPTKG 487
            +++  +T+  I +YPLD  E   ++ + +     N +       VGTA +   E+ P +G
Sbjct: 899  KVVSPKTWTIIDSYPLDPDEQVTAVKNVNIEVSENTHERMDLIVVGTA-IAKGEDMPARG 957

Query: 488  RILVFIV----------EDG-KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
             I VF V          E G KL+LI ++  KGAV +L+   G+    + Q  +     L
Sbjct: 958  TIYVFDVIKVAPDPERPETGRKLKLIGKETVKGAVTALSGIGGQGFIIVAQGQKCMVRGL 1017

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  +        +++GD +K +    Y  E   +    +D   
Sbjct: 1018 KEDGSLLPVAFMDMQCYVNVVKELKGTGMVILGDAVKGLWFAGYSEEPYRMTLFGKDPEY 1077

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
              + A + L D   +Y L A+++ NL  ++ + E        RL    +++ G F     
Sbjct: 1078 LEVVAADFLPDGNKLYMLVADSDCNLHVLQYDPEDPKSSNGDRLLSRSKFYTGNF----- 1132

Query: 654  HGSLVMRLPDSDVGQIPT-----------------VIFGTVNGVIGVIASLPHEQYLFLE 696
              S V  LP + V    T                 V+  + NG + ++ S+  E Y  L 
Sbjct: 1133 -ASSVTLLPRTAVSSELTESSEEAMDVDETFAKYQVLIASQNGSLALVTSVAEESYRRLS 1191

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQ+ L   +    GLN   +R+   E      +  +DG+L+  +L++ + R  EI+  +
Sbjct: 1192 GLQSQLINTVDHPAGLNARAFRA--TESDGAAGRGMVDGNLLRLWLNMGKQRQAEIAGRV 1249

Query: 757  NVSVEELCKRVEEL 770
              +  E+   +E +
Sbjct: 1250 GATEWEIKADLETI 1263


>gi|84999522|ref|XP_954482.1| damage-specific DNA binding protein 1 [Theileria annulata]
 gi|65305480|emb|CAI73805.1| damage-specific DNA binding protein 1, putative [Theileria annulata]
          Length = 1501

 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 39/273 (14%)

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
            D+ T  L     +  +   + + T+ D I VGDLM S+ +L  K  + ++ E  RD+N  
Sbjct: 1218 DENTPFLDVVASYDSNTFVVSLDTKDDVIFVGDLMTSVKML--KFRDNSLHETCRDFNTL 1275

Query: 598  WMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF--RHG 655
            W +++  +D+   L ++++ N   ++K     TD++  + + +G +H GE VN+   R  
Sbjct: 1276 WTTSLVAVDNSSCLVSDDSGNFMLLKKVKHPVTDQQSIKFDKIGLFHHGEVVNKILKRTE 1335

Query: 656  SLVMRLPDSDVGQIPTVIFGTVNGVI--------GVIASLPHEQYLF------------- 694
              +    D+ + +     F   + VI           +SL     LF             
Sbjct: 1336 MPIHHEADTTITRNNPREFMVSSRVICESETNSPSETSSLNEHNNLFKGFFTCATTSGSL 1395

Query: 695  --------------LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
                          L  L+  ++ V K +G +     R+F +    +  + F+DGDL+ES
Sbjct: 1396 FQVCFFEDLKMFLKLSLLEHTMQLVQKDLGNIPSRNQRNFEDLHSNIPTRGFVDGDLVES 1455

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            FL L  +    +  TM ++ ++L  ++  L  L
Sbjct: 1456 FLKLPDSLKKWVFDTMLINSKQLGIKLNSLESL 1488


>gi|170576536|ref|XP_001893668.1| CPSF A subunit region family protein [Brugia malayi]
 gi|158600196|gb|EDP37499.1| CPSF A subunit region family protein [Brugia malayi]
          Length = 1323

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 200/468 (42%), Gaps = 62/468 (13%)

Query: 329  VFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIAKE-------GELT 380
            VF  S  P + +  +       VNL   +     FN+A  P+      E        +L 
Sbjct: 891  VFICSSYPCIFFLESGVPRLHPVNLDGPILSFTTFNNAVCPNGFIYLTERDRFMRVAKLP 950

Query: 381  IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTF 440
               I D     ++ I +G     + +   S T+A+ + + +   +      V + DD+TF
Sbjct: 951  SDMILD-ASYPVKRINVGATVHSVVYLLHSNTYAVLTSEKRKVTKMC----VLINDDKTF 1005

Query: 441  EFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQ 500
            E       DTF Y           + + Y       V+PE  +PT            +++
Sbjct: 1006 E--EHEKPDTFVY----------PEMDQY----KLQVVPEPGQPTSKH---------RIK 1040

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
             + +KE KG V SL + NG LL  + QK+  + W+ +D+  + + S    H +I  L + 
Sbjct: 1041 TLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKDNNLQGI-SFLDMHFYIHQL-IG 1096

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMS--AVEILDDDIYLG-----A 613
             R +  +  D+ +S++LL Y+ E  A+   +RD  ++     A + L D+  +G      
Sbjct: 1097 VR-NLALACDMYRSLALLRYQEEYKALSLASRDMRSDVQPPMAAQFLIDNKQMGFIMSDE 1155

Query: 614  ENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFVNRF--RHGSLVMRLPDSDVGQI 669
              N  +F    N    T E  G  +L +  E ++G  VN F    G +     ++++  +
Sbjct: 1156 AANIAIF----NYLPETLESLGGEKLTLRAEINIGTVVNSFIRVKGHISSGFVENELFSL 1211

Query: 670  --PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT- 726
               +V+F +++G  G +  L  + +  L  LQ  +  ++    GLN +  R+   ++   
Sbjct: 1212 ERQSVLFASLDGSFGYLRPLTEKVFRRLHMLQQLMSSMVLQPAGLNAKGARAARPQRPNH 1271

Query: 727  -VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             ++ +N +DGD+   +L LS    +++++ +  S   +   + E+ R+
Sbjct: 1272 YLNTRNLVDGDVAMQYLHLSLPEKNDLARKLGTSRYHIIDDLIEICRV 1319


>gi|164655043|ref|XP_001728653.1| hypothetical protein MGL_4214 [Malassezia globosa CBS 7966]
 gi|159102535|gb|EDP41439.1| hypothetical protein MGL_4214 [Malassezia globosa CBS 7966]
          Length = 1212

 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 153/378 (40%), Gaps = 36/378 (9%)

Query: 399  EHPRRICHQEQSRTFAIC-SLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSI 457
            E P R   Q+ +RT+A C +L+      E  +H       +T   +   P+D  + G   
Sbjct: 830  EQPVRDPKQDPTRTYAACGALELLVRVGEPPVHGYEFSACETVSALHMAPMDCLDRGSGR 889

Query: 458  LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVEDG------------KLQLIAEK 505
             +      +  Y           E+  +KG + VF V +             +LQL+  +
Sbjct: 890  RTFVVVGTTVTY----------GEDRSSKGHMYVFDVVECVPSEGMAASDALRLQLLCTE 939

Query: 506  ETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDF 565
            E +  V +L+  NG L+AA+ QK+ +  W    +    L +       +    +Q   +F
Sbjct: 940  EMRAPVTALHDLNGFLVAAVGQKLLIRSW----EYCEWLVTVAFLDMGMYTTSIQRVKNF 995

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTV 622
            +++ D  +S   + ++ +   +    RDY    ++    L D   L     + N  L  +
Sbjct: 996  LLLTDYYQSAYFVAFQEDPARLVLLGRDYIPTSVTCGAFLIDRARLSIVTCDMNGCLRLM 1055

Query: 623  RKNSEGATDEERGRLEVVGEYHL-GEFVN-RFRHGSLVMRLPDSDVGQIPTVIFGTVNGV 680
              +    T     RL    EYH  GE V  R  HG  +    +    +I   +    NG 
Sbjct: 1056 DYHPSNPTSLGGQRLLARCEYHAPGEVVRARMLHGPYLATSGECLTSEI---VLAKRNGA 1112

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS-FNNEKKTVDAKNFLDGDLIE 739
            + V+  +  + +  L+  Q+ L ++++   GLN   +R+ FN       AK  LDG L+ 
Sbjct: 1113 VDVLVPVTEKIFPTLQLFQSQLVRMVRHTAGLNPRGFRAVFNQHISRPLAKGILDGTLLH 1172

Query: 740  SFLDLSRTRMDEISKTMN 757
            +   +SR ++  + + ++
Sbjct: 1173 TAESMSRPKLTSLVRDLS 1190


>gi|403224220|dbj|BAM42350.1| splicing factor 3b subunit [Theileria orientalis strain Shintoku]
          Length = 1272

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 31/282 (10%)

Query: 499  LQLIAEKETKGAVYSLNAFNGKLL-AAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            ++L+    TKG +   N +  KLL  AI  ++++Y       G ++L  +  H    L  
Sbjct: 1007 IKLLHVTNTKGWIRCFNNYENKLLLCAIGTRLRMYAL-----GKKQLLLKGEHRS--LTN 1059

Query: 558  Y----VQTRGDFIVVGDLMKSISLL---IYKHEEGAIEERARDYNANWMSAVEILDDDIY 610
            Y    ++  G  I  GD+ +S+ LL    Y  E G  E  A      W+S +E+LD    
Sbjct: 1060 YGFMDIKVIGSRIYCGDIRESVQLLRIKFYGEETGEFEMTATSTGPRWLSTMELLDYSTV 1119

Query: 611  LGAENNFNLFTVR-KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQI 669
            + A+   ++F  R  N+E          E   ++HL + V       L     +S  G++
Sbjct: 1120 MAADKFDSVFVARVPNNEDVV--RNNYFEYQNQFHLSDLVTSLSKVKL-----NSVYGEL 1172

Query: 670  PTVIFGTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD 728
              V++ T+ G +G   +   +  + FL+ L+  L   +  + G   +  RS+        
Sbjct: 1173 --VVYSTILGSLGAFVTFTSKDEVDFLQHLEMLLANELDTLSGREAQMHRSY-----YFP 1225

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
             +N +DGDL E + +LS     +I+  +NV V E+ K+++ +
Sbjct: 1226 VQNVIDGDLCELYFNLSSDLKAKIANQLNVKVAEVVKKLKNI 1267



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 47/330 (14%)

Query: 29  ERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-IKG 87
           ++  +L  IVD  VVD+   G  + +   G + +  L+ +R G+   E A  EL G  + 
Sbjct: 397 DKLPSLSSIVDMKVVDVMGTGDYEFIMGCGRWYNSRLKSLRYGLSTEELAFNELPGRPRA 456

Query: 88  MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLF-CHDAIYNQ 146
           +++++S  +  +D F++VSF   T +L++   + +EE     F +   TL  C+ + Y+ 
Sbjct: 457 VFTIKS-LESNYDEFIIVSFQGNTLVLSIG--EAVEEVTDSFFLTSITTLHSCYMSNYHA 513

Query: 147 ----------------LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLA 190
                            VQV     R    +  ++  EWK P    V +A  N +Q+LL 
Sbjct: 514 TESLEGRFEGGVSDGIFVQVHDSGFRY---SHGQVVKEWKVPSTKRVKLADNNLNQLLLV 570

Query: 191 TGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI-----NPIGENPSYSQIAAVGMWTDIS 245
             GG +VY E+ D  L EV    L  EI+C+ +     +  GE     +   VG   +I 
Sbjct: 571 LSGGEVVYFELVDNDLEEVAKRNLSTEITCVALQHTPASKAGERVRKGEFCCVGSIDNI- 629

Query: 246 VRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFE---------------GISYLLCALGDG 289
           +R+  L   L + + + L    +P S+ L   E                 SYL   L +G
Sbjct: 630 IRVLKLDKTLKMCSSQLLSNNALPESLALVTAETGSGSGGGSSGGLGESESYLYVGLNNG 689

Query: 290 HLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            L+   ++   G L+D++   +GT+ + L+
Sbjct: 690 ILIRNNVD-SLGNLSDQESRFMGTKAVKLK 718


>gi|70954357|ref|XP_746229.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56526771|emb|CAH77136.1| hypothetical protein PC000016.02.0 [Plasmodium chabaudi chabaudi]
          Length = 372

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 75/361 (20%), Positives = 153/361 (42%), Gaps = 41/361 (11%)

Query: 432 VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKG-RIL 490
           +++++    + I    L+  E   S+ +C       +     T   L   N P+   R+ 
Sbjct: 26  IKIINPINLQVIDKVSLELEEAALSVCACELEALHCLIVGTTTNMTLKNRNVPSASLRVY 85

Query: 491 VFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH 550
            + + + KL L+     +   Y    FNG+++ ++  K+++Y       G ++L  +C +
Sbjct: 86  TYDI-NYKLNLLHITPIEDQPYCFCPFNGRVIVSVGNKLRIYAL-----GKKKLLKKCEY 139

Query: 551 HGHILALY-VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
                A+  ++  GD I   D+ +S+ +  Y   +  I   + D    W++  EILD   
Sbjct: 140 KDIPEAIVSIKVSGDRIFASDIRESVLIFFYDSNQNVIRLISDDIIPRWITCSEILDHHT 199

Query: 610 YLGAENNFNLFTVRKNSEGATDEERG-------------------RLEVVGEYHLGEFVN 650
            + A+   ++F +R   E A  EE G                   ++E +  +H+GE V 
Sbjct: 200 IMAADKFDSVFILRVPEE-AKQEEYGIANKCWYGGEVISSSTKNRKMEHIMSFHIGEIVT 258

Query: 651 RFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFL-EKLQTNLRKVIKGV 709
             +   L    P S       +I+ T+ G IG      +++ L L + L+  LR     +
Sbjct: 259 SLQKVKLS---PASS----ECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKHAL 311

Query: 710 GGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEE 769
            G  H  +RS+ +       ++ +DGDL E F  L      +++  +  + +E+ +++E+
Sbjct: 312 CGREHIFFRSYYHP-----VQHVIDGDLCEQFSSLPFDVQRKVASDLEKTPDEILRKLED 366

Query: 770 L 770
           +
Sbjct: 367 I 367


>gi|428186188|gb|EKX55039.1| hypothetical protein GUITHDRAFT_160593 [Guillardia theta CCMP2712]
          Length = 2290

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 43/327 (13%)

Query: 469  YYCVGTAYVLPE-ENEPTKGRILVFIVE--------DGKLQLIAEK--------ETKGAV 511
            +  VGT +   E E     GRI VF V         +G+     +K        + K  V
Sbjct: 1257 FVAVGTGFQNGESETSRATGRIYVFEVTTVVGEEGYEGRTSFKIKKIFTSADIQDIKAPV 1316

Query: 512  YSLNAFNGKLLAAIN--------QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRG 563
             +L    G LL A           K+ +Y+W+       +L        H+    ++T  
Sbjct: 1317 SALCQLEGYLLVAQGPNPGMIGGSKLYVYEWV-----DEKLVGRAFFDAHLYITTLKTVK 1371

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE--ILDDDIYLGA---ENNFN 618
             FIV GD+  S+ LL ++ +   ++  A+D     + A E  ++  +  L A   + N  
Sbjct: 1372 FFIVFGDIRHSVHLLRWREDIRMLQLLAKDALPLSVYAAEFVVMGSNFGLLASDEQKNVQ 1431

Query: 619  LFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVN 678
            +F    NS    +  R +L    + H+G  +N+F    L  R     +G      + T++
Sbjct: 1432 VFVFNPNS---PEYRRQQLICRADLHVGSHINKFIRWPLPFR---PTLGVRTAAHYTTLD 1485

Query: 679  GVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE--KKTVDAKNFLDGD 736
            G IG I  +P + Y  L  LQ  L   +    GLN   WR +      K   AKNFLDG+
Sbjct: 1486 GGIGAIIPIPEQSYRRLLALQNLLVTAMPHYAGLNPRSWRLYKPAMCMKRRYAKNFLDGN 1545

Query: 737  LIESFLDLSRTRMDEISKTMNVSVEEL 763
            L+  +L L      ++S  +N + E +
Sbjct: 1546 LLGRYLHLDLALQMQLSSALNQTREAI 1572


>gi|440294229|gb|ELP87246.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
          Length = 1168

 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 159/778 (20%), Positives = 313/778 (40%), Gaps = 91/778 (11%)

Query: 46   ERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLV 104
            +++   + +  +G      ++++++ +   E A + L  I  G++ L+ S D     +LV
Sbjct: 431  DKKTANKYILYTGRGPSSCVQVLKHQMKTLEVAEITLPAIAMGVYPLQRSKD--VSEYLV 488

Query: 105  VSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRE 164
            V F + T IL ++ EDE++ET+       + ++          VQV    + + +S  +E
Sbjct: 489  VPFANATSILKIS-EDEVKETDETPVILSSYSVRIGMMPDGTFVQVLKEKIVVYTSKIKE 547

Query: 165  LRNEWKSPPGYSVNVATANASQVLLATGGGH--LVYLEIGDGILTEVKHAQLEYEISCLD 222
            +     S  G  V  A   +  V+  + G    ++  +  DG L E++      +I  + 
Sbjct: 548  V-----SVVGDIVCAAIVESFVVVGVSKGDDNVIMLFKYEDGGLHEIESKGSFGKIRSVT 602

Query: 223  INPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGG------EIIPRSVLLCAF 276
            I    EN    +  AV    D  +RI +L   N  T + L        E     V     
Sbjct: 603  I----ENKEVPKFCAVA-CEDGGIRILTL--FNTETTKALTRVSVISLESAINDVKFGVL 655

Query: 277  EGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITL-RTFSSKNTTH--VFAAS 333
                 ++  L DG L     +  +GE+ +     +G Q + L R +++  +    +   +
Sbjct: 656  NSKQIIVAGLDDGKLAWCFFDSNSGEIEETNFEFVGVQNVNLGRVYTTSESGEEWMVGYN 715

Query: 334  DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHI 392
                ++ +SN ++  + ++   +  +  F ++   + +A+     L I   ++    L  
Sbjct: 716  GNGILLSTSNGQIKSTPLDQPNIYGVEGFKASFVDNPIALVSGNILKILVFENTTSSLSG 775

Query: 393  RSIPLGEHPRRICHQEQSR-TFAICSLKNQSCAEESEMH---------FVRLLDDQT-FE 441
              +PL   PR+I   E    TF +C+      A +  +            R+  + T  E
Sbjct: 776  VKVPLCMTPRKIVESETVEDTFVLCADNFSKYANDEIIRGDDGEWVSSIYRMDKEATKIE 835

Query: 442  FISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEEN-EPTKGRILVFIVEDGKLQ 500
             ++ +P + +    ++L+ S S    +Y  VG A        + T   I V+ V    +Q
Sbjct: 836  LVTKFPQNVYALCGTLLTVSDS----IYLVVGLAEKYTSRPIKFTNSSIAVYKVNVDNIQ 891

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLY----KWMLRDDGTRELQSECGHHGHILA 556
             +   +T+  V S+  + G++L  IN+++++Y    K +LR    R+L SE     H++ 
Sbjct: 892  YLYTTQTEYPVRSMAVYGGRVLCGINRQLRMYEIGKKQLLRKAELRQLASEISDI-HVIN 950

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA--- 613
              +Q  G       +   IS + +   +   +  A D    W      L    Y+G+   
Sbjct: 951  NKIQLVG-------ISDGISFVRFNQTKQEFDIYA-DTLPRWTVKSVALTPTSYIGSDKF 1002

Query: 614  -------------ENNFNLFT-VRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVM 659
                         EN  N+F+ +    +   +  + +   + E++LG+    F +  + +
Sbjct: 1003 GQIFVEGLDKETEENASNIFSSILSGEKTIYNGAKYKAVSLNEFYLGDIATGFVNCCVRI 1062

Query: 660  RLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQY---LFLEKLQTNLRKVIKGVGGLNHEQ 716
              P          IF   + + G+ A +P   +    F E+L+ ++R   + V G +H  
Sbjct: 1063 GAPQ---------IFIVSHLLGGISALIPLNGFGEIEFFEQLEMHMRVRHQNVNGRDHIA 1113

Query: 717  WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
            +RS       V  K   DGDL E F  L+     EI+  M   V E+ K++ +L  + 
Sbjct: 1114 YRS-----SVVPVKGIFDGDLCELFEKLTEEEKKEIAGEMEREVGEIVKKLHDLRNMR 1166


>gi|312069702|ref|XP_003137805.1| hypothetical protein LOAG_02219 [Loa loa]
          Length = 1065

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 479  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 770  PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 818

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
            +  + + S    H ++  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 819  NNLQGI-SFLDMHFYVHQL-IGVR-NLALACDMYRSVALLRYQEEYKALSLASRDMRSDV 875

Query: 599  ---MSAVEILDDD----IYLGAENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFV 649
               M+A  I+D+     +      N  +F    N    T E  G  +L +  E ++G  V
Sbjct: 876  QPPMAAQFIIDNKQMGFVMSDEAANIAIF----NYLPETLESLGGEKLTLRAEINIGTVV 931

Query: 650  NRF--RHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
            N F    G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  +
Sbjct: 932  NSFIRVKGHISSGFVENELFSLERQSVLFASLDGSFGFLRPLTEKVFRRLHMLQQLMSSM 991

Query: 706  IKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
            +    GLN +  R+    +    ++ +N +DGD++  +L LS    +++++ +  S   +
Sbjct: 992  VPQPAGLNAKGARAARPPRPNHYLNTRNLVDGDMVMQYLHLSLPEKNDLARKLGTSRYHI 1051

Query: 764  CKRVEELTRL 773
               + E+ R+
Sbjct: 1052 IDDLIEICRV 1061


>gi|146094112|ref|XP_001467167.1| putative CPSF-domain protein [Leishmania infantum JPCM5]
 gi|134071531|emb|CAM70220.1| putative CPSF-domain protein [Leishmania infantum JPCM5]
          Length = 1347

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 188/474 (39%), Gaps = 101/474 (21%)

Query: 375  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE-----ESEM 429
            ++G L IG+++ ++K     +PLGE   ++ H+  +    + S++     E      S +
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETITQL-HEAAAWGGYVASVRKVEGDEVLFLPSSAI 856

Query: 430  HF-------------VRLLDDQTFEFISTYPLDTFEYGCS------ILSCSFSDDSNV-- 468
             F             V LL+++   F+ T  LD  E G        ++    SD + V  
Sbjct: 857  QFPWAADLSLWRSAAVPLLENERCVFLETVRLDGAEGGGVGERGGDLIDVPASDGAAVSE 916

Query: 469  -----YYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA--- 516
                    +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   
Sbjct: 917  EEWQHLLLIGSSFTFPDEQRARSGRITWCTLREERQRQRLHLIASKDIGGALQCCAAVPH 976

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLM 572
            + G++   +N  + LY+W   +D T   +  C        ++ LY  +    ++V  D+ 
Sbjct: 977  YKGRIALGVNGCVCLYQWN-TEDQTFVAEERCRVGLTVTKLIPLYHTSLAASVLVALDVR 1035

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV-- 622
             S   +     +G ++   RD +        I+D  +   AEN        NF    V  
Sbjct: 1036 HSAFFIEVDTLQGNLKVLCRDADLRG-----IMDGHVGSDAENLCLFDDSLNFTALKVVP 1090

Query: 623  -------RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLP---DSDVGQ 668
                      +  A    + R EV  + HLG+ V   R GS     +M  P    S   Q
Sbjct: 1091 LPVEARDGDAAAAARATAQYRFEVRAQCHLGDLVTCVRQGSFAATSLMEAPAHCSSAQNQ 1150

Query: 669  I-------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 718
            +       P ++F T +G  GV+  +    YL L  L+ +L + +  VGGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPVHAATYLVLRALEASLVRTVPPVGGLSHQAFREVL 1210

Query: 719  -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
                             +   E+ +  +  N +DGD++E F+ LS +    + +
Sbjct: 1211 RAGQERGVSYLASKTGCALTRERLRRYEPLNTVDGDVVEQFVLLSPSDKKHVCR 1264


>gi|209881602|ref|XP_002142239.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
 gi|209557845|gb|EEA07890.1| CPSF A subunit domain-containing protein [Cryptosporidium muris RN66]
          Length = 1509

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/536 (20%), Positives = 204/536 (38%), Gaps = 145/536 (27%)

Query: 379  LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICS------LKNQSCAEE------ 426
            L   +ID +Q+ H RS+ L   P RIC+      + +        +KN     +      
Sbjct: 971  LRASSIDILQQYHCRSLQLNFTPERICYISNLNVYVVVGIWEKGLMKNSKSENKFLIQNN 1030

Query: 427  ----SEMHFVR------------LLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYY 470
                S + FV+            +L  +T E  S YP    EY    ++ +  + S  + 
Sbjct: 1031 STLKSSLSFVQALMCVISANNLEILHFKTLES-SVYP-TCLEYIELNINQTPENISESFI 1088

Query: 471  CVGTAYV---------LPEENEPTKGRILVFIVEDGKLQLIAEKET----KGAVYSLNAF 517
             +GT  V          P  + P  G++ +F +     + I ++ET    +G  Y++  F
Sbjct: 1089 VLGTNKVGHINDYSNKSPNIDLPI-GKLTLFSIRKLHSKFIVDEETSINAEGCPYAITRF 1147

Query: 518  N-GKLLAAINQKIQLYKWMLRDDGTRELQSEC---------------------------- 548
              G +L A+   +  Y+ +     +  L+                               
Sbjct: 1148 QLGTILVAVENSVVTYEIIQYSTSSNYLKDTSILPSSSSSSSSCLLLDTLPENEKTPKFK 1207

Query: 549  -----GHHGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAV 602
                  +  H + ++++   D +++VGDLM+S+ L  Y       EE  RD +  W+   
Sbjct: 1208 FNKINSYSTHTMIVFLKLWKDEYLLVGDLMRSVGLWKYDKVAKQFEEICRDPSLAWVMDG 1267

Query: 603  EILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP 662
              ++ ++Y+ ++ N N+  + K      DE    L+ +  +H GE V+ F+ G L+M  P
Sbjct: 1268 IFINKNLYMVSDENKNVRILTKPENPINDEMDTVLQSIAHFHSGEIVSTFQKGKLMMPYP 1327

Query: 663  D--SDVGQI----------PTVIFGTVNGVIGVIASLPHEQYLFLE----------KLQT 700
                ++  I            ++FGT  G + VI SL  +  +FL+           ++ 
Sbjct: 1328 RCLQEINNIGLDFCHSLYSEQIVFGTAQGSMSVIFSLNADYKMFLQLIMFEEAIIAAIKK 1387

Query: 701  NLRKVIKG--------------------------VGGLNHE-----QW------RSFNNE 723
            +LR + K                           +G +  E     QW      + +N E
Sbjct: 1388 SLRTIYKDCKVCNLSIKQIKQLYIKESSSSFSGVIGTIGGEDVTPFQWNLSKNYQDYNYE 1447

Query: 724  KKTVDA-KNFLDGDLIESFLDLSRTRMDEISKTM------NVSVEELCKRVEELTR 772
             +   A + F+ GD+IE FL  S    + + + +      N+++ E  K++E + +
Sbjct: 1448 YECSGASRGFISGDIIELFLKFSNELQEMVIQELKAIQIDNITIPETSKQLEHIIQ 1503


>gi|395324102|gb|EJF56549.1| hypothetical protein DICSQDRAFT_93527 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1433

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 112/511 (21%), Positives = 215/511 (42%), Gaps = 57/511 (11%)

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK---KLLYSNVNLKEVSHM 359
            L ++K++S    P        +  + VF   DRP+ I S++K   ++  S  N+      
Sbjct: 923  LAEQKRISRLLLPFVTSPAPGQTYSGVFFTGDRPSWIVSTDKGGVRVFPSGHNVVHAFTT 982

Query: 360  CPFNSAAFPDSLAIAKEGELTIGTIDDI---QKLHIRSIPLGE-HPRRICHQEQSRTFAI 415
            C    +   D L  ++EG   +  + DI     L  RS+P    +   +     S   A 
Sbjct: 983  CSLWESRG-DFLLYSEEGPSLVEWMPDIILDAHLPARSVPRSRPYSHVVFDASSSLIVAA 1041

Query: 416  CSLKNQSCAEESEMHFVRLLDD----------QTFEFIST---YPLDTFEYGCS-ILSC- 460
             S  N+  + + + + V   D            T E IS      +D +E+  +  +SC 
Sbjct: 1042 SSFMNRFASYDEDGNIVWEPDSPNISFPHCETSTLELISPDGWITMDGYEFAANEFVSCV 1101

Query: 461  ------SFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG--------KLQ 500
                  + S +S +  +  VGT  +   E+   KG + +F    +V D         +L+
Sbjct: 1102 VSVPLETVSTESGMKDFIAVGTT-INRGEDLAVKGAVYIFEIVEVVPDASLNIKRWWRLK 1160

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
            L+   + KG V  L   NG L++++ QKI +  + L +        + G    +    ++
Sbjct: 1161 LLCRDDAKGPVSFLCGMNGYLVSSMGQKIFVRAFDLDERLVGVAFLDVG----VYVTSLR 1216

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
               + +V+GD +KS+  + ++ +   +    +D +   ++  ++   D +L         
Sbjct: 1217 AVKNLLVIGDAVKSVWFVAFQEDPYKLVILGKDPHHCCVTRADLFFADGHLSIVTCDEEG 1276

Query: 621  TVRKNSEGATD-EERGRLEVV--GEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--VIFG 675
             VR  +    D E +G   ++   E+H G+    +R   LV R P +   +IP   +I G
Sbjct: 1277 VVRLYAYDPHDPESKGGQHLLRRTEFH-GQ--TEYRSSLLVARRPKAGDPEIPQARLICG 1333

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AKNFLD 734
            +V+G +  +  +    +  L  LQ  L + ++ V  LN + +R   NE  +   +K  LD
Sbjct: 1334 SVDGSLTTLTYVDENAFKRLHLLQGQLIRTVQHVAALNPKAFRMVRNEYVSRPLSKGVLD 1393

Query: 735  GDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
            G+L+ +F DL   R +E+++ +      + K
Sbjct: 1394 GNLLATFEDLPIGRQNEVTRQIGTDRATVLK 1424


>gi|384253955|gb|EIE27429.1| hypothetical protein COCSUDRAFT_64224 [Coccomyxa subellipsoidea
            C-169]
          Length = 1137

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 208/532 (39%), Gaps = 114/532 (21%)

Query: 329  VFAASDRPTVIYSSNKKLLYSNVNLK-EVSHMCPFNSAAFPDSLAIA----KEGEL---- 379
            +F + +RP  + +S   L+   ++++  VS M PF++   P     A     +GE     
Sbjct: 623  MFVSGERPLWLVASRGTLVAHAMDVEGRVSGMTPFHNINCPLGFITACMAENDGETLKIC 682

Query: 380  ------TIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLK------NQSCAEES 427
                   + T   +QK+ +R+ P      R+ +  ++R + +   +      +Q  A + 
Sbjct: 683  QLPMRTRLDTPWPLQKIAVRATP-----HRLAYYAEARLYVLLVSRPVPYREHQEEASDG 737

Query: 428  EMHF---------------------VRLLDDQTFEFISTYPLDTFEYGCSI----LSCSF 462
            + H                      VRLL+   ++ ++ + LD  E  CS+    L  + 
Sbjct: 738  DPHASYSYICADAAAKASGTELGGEVRLLEPGRYQTVARHALDPGEEPCSVAADWLRNAQ 797

Query: 463  SDDSNVYYCVGTAYVLPEENEPTKGRILVFIVE--------------DGKLQLIAEKETK 508
            +     Y  VGTA     E+ P  GRIL+F                   +L L+      
Sbjct: 798  TGALEPYITVGTALNY-GEDYPCSGRILLFKATRTSTSGAEQADPTISWQLTLVHASGFS 856

Query: 509  GAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGH-----HGHILALYVQTRG 563
              V  L   +G+L+AA+   +Q+           EL+    H     H  +    V T  
Sbjct: 857  RPVQGLAVMDGRLVAAVGNNMQVM----------ELRGSSLHMISFFHAQLFITSVATIK 906

Query: 564  DFIVVGDLMKSISLLIYKHEEG---AIEERARDYNANWMSAVEILDDDIYL-----GAEN 615
             FI++GD+ K ++  +Y  ++    A+ + ++DYN   + A E L +   L      A  
Sbjct: 907  TFILLGDVHKGLT-FVYADKKANYTALTQLSKDYNDVDVEAAEFLVNGKKLFLLACDAAQ 965

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL-PDSDVG-QIPTVI 673
            N  LF      E     +  +L  +G  H+G+ +      SL  R+ P S  G Q+   +
Sbjct: 966  NLRLFAYDGGKEQQATWQGKKLLPLGAIHVGQNIC----SSLSHRITPASATGVQLRAAV 1021

Query: 674  FGTVNGVIGVIAS----LPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF--NNEKKTV 727
            FG+  G I  +A     LP E+ L    LQ  +   +  V GLN   +R    +  K   
Sbjct: 1022 FGSAAGSIASLAPTWDGLPAEELL---ALQREMVLAVPQVAGLNPVSFRRRYKHGVKALA 1078

Query: 728  DAKNF---------LDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              ++F         LD D +  F  L  T    ++   N+S +++   + E+
Sbjct: 1079 GGQSFEAPVSDDRVLDLDQLNRFQWLPLTEQVALAAKCNLSRQQVLHALREM 1130


>gi|68071595|ref|XP_677711.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56497932|emb|CAI04454.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 493

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 132/318 (41%), Gaps = 49/318 (15%)

Query: 379 LTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQ 438
           L I  +++I + +I+ IP      +I   ++S       L   SC  E E H       Q
Sbjct: 53  LYISHLNEINETYIQKIPFYRTVEKIAFHKES------GLLITSCPPE-EKHKTNKNLKQ 105

Query: 439 TFEFISTYPLDTFEYGCSILS-------CSFSDDSNVY---------YCVGTAYVLPEEN 482
              F + Y  ++F+Y   I S       C +  + ++Y          CVGTA +    +
Sbjct: 106 IICFFNPYQ-NSFKYSYIIPSKYNVSSICIYQINKDIYPNKSNINTLICVGTANINDRVS 164

Query: 483 EPTKGRILVFIVE--DGKLQL---IAEKETKGAVYSLNAFNGKLLAAINQK--------- 528
           EP+ G I +F  +  D   ++          G +  L  F  KL++ IN           
Sbjct: 165 EPSSGNIYIFFAKKKDNLFEIKHIYTHNVNVGGITHLKQFYDKLISTINNTVVILDISDF 224

Query: 529 -IQLYKWM--------LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLI 579
            I L K++        L +DGT    +       I++L V    ++IVVGD+M S+++L 
Sbjct: 225 LINLDKYVDNTNKPIKLENDGTIVDVASFTPSSWIMSLDVIE--NYIVVGDIMTSVTILS 282

Query: 580 YKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEV 639
           Y      + E  RDY+  W + V  L    +L ++   N    +K+S    DE+  +L  
Sbjct: 283 YDFNNSTLTEVCRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIRYNDEDSFKLSR 342

Query: 640 VGEYHLGEFVNRFRHGSL 657
           V  ++ G  VN+    SL
Sbjct: 343 VAFFNHGHVVNKMLPVSL 360


>gi|125526594|gb|EAY74708.1| hypothetical protein OsI_02601 [Oryza sativa Indica Group]
          Length = 314

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 7/65 (10%)

Query: 584 EGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEY 643
           +G  +E +RDYN  WM+AVE+LDD +Y+GA+N +NLFTV K          GRL V+G+Y
Sbjct: 153 KGQTDELSRDYNITWMTAVEMLDDYVYIGADNCYNLFTVLK-------RRVGRLLVIGQY 205

Query: 644 HLGEF 648
           HLG+ 
Sbjct: 206 HLGDL 210


>gi|402590016|gb|EJW83947.1| hypothetical protein WUBG_05142 [Wuchereria bancrofti]
          Length = 374

 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 479 PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
           PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 79  PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 127

Query: 539 DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
           +  + + S    H +I  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 128 NNLQGI-SFLDMHFYIHQL-IGVR-NLALACDMYRSLALLRYQEEYKALSLASRDMRSDV 184

Query: 599 MS--AVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFV 649
               A + L D+  +G        N  +F    N    T E  G  +L +  E ++G  V
Sbjct: 185 QPPMAAQFLIDNKQMGFIMSDEAANIAIF----NYLPETLESLGGEKLTLRAEINIGTVV 240

Query: 650 NRFRH--GSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
           N F    G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  +
Sbjct: 241 NSFIRVKGHISSGFVENELFSLERQSVLFASLDGSFGYLRPLTEKVFRRLHMLQQLMSSM 300

Query: 706 IKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
           +    GLN +  R+   ++    ++ +N +DGD++  +L LS    +++++ +  S   +
Sbjct: 301 VLQPAGLNAKGARAARPQRPNHYLNTRNLVDGDVVMQYLHLSLPEKNDLARKLGTSRYHI 360

Query: 764 CKRVEELTRL 773
              + E+ R+
Sbjct: 361 IDDLNEICRV 370


>gi|121797760|sp|Q2TZ19.1|CFT1_ASPOR RecName: Full=Protein cft1; AltName: Full=Cleavage factor two protein
            1
 gi|83775384|dbj|BAE65504.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1393

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 40/331 (12%)

Query: 472  VGTAYVLPEENEPTKGRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK 520
            VGTA+   E+   ++G + VF V            D KL+L+ ++  KGAV +L+   G+
Sbjct: 1065 VGTAFARGEDIA-SRGCVYVFEVIKVVPDPKRPEMDRKLRLVGKEPVKGAVTALSEIGGQ 1123

Query: 521  LLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIY 580
                + Q  +     L++DG+    +      H+  +         ++ D +K +    Y
Sbjct: 1124 GFLIVAQGQKCIVRGLKEDGSLLPVAFMDVQCHVSVVKELKGTGMCIIADAVKGLWFAGY 1183

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRL 637
              E   +   A+D +   + A + L D      L A+++ NL  ++ + E        RL
Sbjct: 1184 SEEPYKMSLFAKDLDYLEVLAADFLPDGNKLFILVADSDCNLHVLQYDPEDPKSSNGDRL 1243

Query: 638  EVVGEYHLGEFVNRFRHGSLVMRLPDSDVG---------------QIP--TVIFGTVNGV 680
                ++H G F+      S +  LP + V                +IP   ++  + NG 
Sbjct: 1244 LSRSKFHTGNFI------STLTLLPRTSVSSEQMISDVDAMDVDIKIPRHQMLITSQNGS 1297

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            +G++  +  E Y  L  LQ+ L   I+   GLN   +R+   E      +  LDG L+  
Sbjct: 1298 VGLVTCVSEESYRRLSALQSQLTNTIEHPCGLNPRAFRAV--ESDGTAGRGMLDGKLLFQ 1355

Query: 741  FLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
            +LD+S+ R  EI+  +  +  E+    E ++
Sbjct: 1356 WLDMSKQRKVEIASRVGANEWEIKADFEAIS 1386


>gi|315045910|ref|XP_003172330.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
 gi|311342716|gb|EFR01919.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893]
          Length = 1397

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 177/428 (41%), Gaps = 52/428 (12%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLKNQ--SCAEESEMHF-----------------VR 433
            R IPLGE    I +   S ++ I +   +     E+ E H                  V+
Sbjct: 965  RKIPLGEQVDCIVYSSASESYVIGTSTKEDFKLPEDDESHTEWRNEFITFLPQLDRGTVK 1024

Query: 434  LLDDQTFEFISTYPLDTFE-YGC-SILSCSFSDDSNV---YYCVGTAYVLPEENEPTKGR 488
            LL+ + +  I  Y ++  E   C  I+    S+ ++       VG+A    E+  P KG 
Sbjct: 1025 LLEPKNWSAIDIYEVEPAERITCIKIIRLEISETTHERKDMVVVGSAVAKGEDIVP-KGC 1083

Query: 489  ILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
            I VF + D            KL+L A +E KGAV +++   G+    + Q  +     L+
Sbjct: 1084 IRVFEIIDVVPDPDHPEKNKKLKLFAREEVKGAVTAVSGIGGQGFLIVAQGQKCMVRGLK 1143

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNAN 597
            +DG+    +      ++  L         ++GD  K +    Y  E   ++   ++    
Sbjct: 1144 EDGSLLPIAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFTGYSEEPYKLDLFGKENENL 1203

Query: 598  WMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR--- 651
             +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +    
Sbjct: 1204 AVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMTL 1263

Query: 652  FRHGSLVMRLP------DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
              HGS  +  P      D+D+   P+   V+     G IGVI+ L  + Y  L  LQ+ L
Sbjct: 1264 LPHGSHTLSSPVDEDAMDTDLPPPPSKYQVLITFQTGSIGVISPLNEDSYRRLLALQSQL 1323

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++   GLN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1324 VNALEHPCGLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1382

Query: 763  LCKRVEEL 770
            +   +E+L
Sbjct: 1383 IRIDLEKL 1390


>gi|441648592|ref|XP_004093268.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
            specificity factor subunit 1 [Nomascus leucogenys]
          Length = 1177

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 552  GHILALYVQTR--GDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI 609
             H +A +V+++   +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+ 
Sbjct: 940  AHYVAYHVESKVCPNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNA 999

Query: 610  YLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR----HGSLVMRLP 662
             LG   ++ + NL       E        RL    ++H+G  VN F      G+      
Sbjct: 1000 QLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSK 1059

Query: 663  DSDVGQIPTVI-FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
             S V +   +  F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  +
Sbjct: 1060 KSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLH 1119

Query: 722  NEKKTVD--AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +++T+    +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1120 VDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1173


>gi|398019848|ref|XP_003863088.1| CPSF-domain protein, putative [Leishmania donovani]
 gi|322501319|emb|CBZ36398.1| CPSF-domain protein, putative [Leishmania donovani]
          Length = 1347

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 105/474 (22%), Positives = 187/474 (39%), Gaps = 101/474 (21%)

Query: 375  KEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE-----ESEM 429
            ++G L IG+++ ++K     +PLGE   ++ H+  +    + S++     E      S +
Sbjct: 798  QDGRLHIGSLEALEKTSRTFLPLGETITQL-HEAAAWGGYVASVRKVEGDEVLFLPSSAI 856

Query: 430  HF-------------VRLLDDQTFEFISTYPLDTFEYGCSI------LSCSFSDDSNV-- 468
             F             V LL+++   F+ T  LD  E G         +    SD + V  
Sbjct: 857  QFPWAADLSLWRSAAVPLLENERCVFLETVRLDGAEGGGVGERGGDPIDVPASDGAGVSE 916

Query: 469  -----YYCVGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA--- 516
                    +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   
Sbjct: 917  EEWQHLLLIGSSFTFPDEQRARSGRITWCTLREERQRQRLHLIASKDIGGALQCCAAVPH 976

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLM 572
            + G++   +N  + LY+W   +D T   +  C        ++ LY  +    ++V  D+ 
Sbjct: 977  YKGRIALGVNGCVCLYQWN-TEDQTFVAEERCRVGLTVTKLIPLYHTSLAASVLVALDVR 1035

Query: 573  KSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV-- 622
             S   +     +G ++   RD +        I+D  +   AEN        NF    V  
Sbjct: 1036 HSAFFIEVDTLQGNLKVLCRDADLRG-----IMDGHVGSDAENLCLFDDSLNFTALKVVP 1090

Query: 623  -------RKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLP---DSDVGQ 668
                      +  A    + R EV  + HLG+ V   R GS     +M  P    S   Q
Sbjct: 1091 LPVEARDGDAAAAARATAQYRFEVRAQCHLGDLVTCVRQGSFAATSLMEAPAHCSSAQNQ 1150

Query: 669  I-------PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--- 718
            +       P ++F T +G  GV+  +    YL L  L+ +L + +  VGGL+H+ +R   
Sbjct: 1151 LLLPGIAGPQLVFATAHGGFGVVTPVHAATYLVLRALEASLVRTVPPVGGLSHQAFREVL 1210

Query: 719  -----------------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
                             +   E+ +  +  N +DGD++E F+ LS +    + +
Sbjct: 1211 RAGQERGVSYLASKTGCALTRERLRRYEPLNTVDGDVVEQFVLLSPSDKKHVCR 1264


>gi|156339124|ref|XP_001620088.1| hypothetical protein NEMVEDRAFT_v1g149219 [Nematostella vectensis]
 gi|156204443|gb|EDO27988.1| predicted protein [Nematostella vectensis]
          Length = 69

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 9/67 (13%)

Query: 717 WRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV---------SVEELCKRV 767
           WRSF+NE+K   A  F+DGDLIESFLDL R RM+E+   + +         +V++L K V
Sbjct: 3   WRSFSNERKMEPAHGFIDGDLIESFLDLPRARMEEVVTGLQIDDGGMKKECTVDDLVKTV 62

Query: 768 EELTRLH 774
           EELTR+H
Sbjct: 63  EELTRIH 69


>gi|303321596|ref|XP_003070792.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
 gi|240110489|gb|EER28647.1| CPSF A subunit region family protein [Coccidioides posadasii C735
            delta SOWgp]
          Length = 1394

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 161/372 (43%), Gaps = 37/372 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 486
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1022 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1080

Query: 487  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF I+E          + KL++ A+ + KGAV +++   G+  L+ A  QK  +  
Sbjct: 1081 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1140

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D
Sbjct: 1141 --LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKD 1198

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H+G F +
Sbjct: 1199 NEYLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHMGHFTS 1258

Query: 651  RF-----RHGSLVMRLP---DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                      S     P   D DV  +P    V+  +  G IGV+  L  + Y  L  LQ
Sbjct: 1259 TMTLLPQHSSSPSADDPGEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQ 1318

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   
Sbjct: 1319 SQLVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGAD 1376

Query: 760  VEELCKRVEELT 771
            +E +   +E+++
Sbjct: 1377 IESIRVDLEKIS 1388


>gi|5817204|emb|CAB53699.1| hypothetical protein [Homo sapiens]
          Length = 215

 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 31/220 (14%)

Query: 570 DLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR--KNSE 627
           D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+  VR   N+ 
Sbjct: 2   DVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTN 61

Query: 628 GATDEE---------RGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT 671
              DE+         RG L       EV+  YH+GE V   +  +L+        G   +
Sbjct: 62  DEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP-------GGSES 114

Query: 672 VIFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAK 730
           +++ T++G IG++     HE + F + ++ +LR     + G +H  +RS+         K
Sbjct: 115 LVYTTLSGGIGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSY-----YFPVK 169

Query: 731 NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
           N +DGDL E F  +   +   +S+ ++ +  E+ K++E++
Sbjct: 170 NVIDGDLCEQFNSMEPNKQKNVSEELDRTPPEVSKKLEDI 209


>gi|320040273|gb|EFW22206.1| hypothetical protein CPSG_00105 [Coccidioides posadasii str.
            Silveira]
          Length = 1387

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 161/372 (43%), Gaps = 37/372 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 486
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1015 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1073

Query: 487  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF I+E          + KL++ A+ + KGAV +++   G+  L+ A  QK  +  
Sbjct: 1074 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1133

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D
Sbjct: 1134 --LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKD 1191

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H+G F +
Sbjct: 1192 NEYLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHMGHFTS 1251

Query: 651  RF-----RHGSLVMRLP---DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                      S     P   D DV  +P    V+  +  G IGV+  L  + Y  L  LQ
Sbjct: 1252 TMTLLPQHSSSPSADDPGEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQ 1311

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   
Sbjct: 1312 SQLVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGAD 1369

Query: 760  VEELCKRVEELT 771
            +E +   +E+++
Sbjct: 1370 IESIRVDLEKIS 1381


>gi|412986884|emb|CCO15310.1| predicted protein [Bathycoccus prasinos]
          Length = 1595

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 53/346 (15%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSN----VYYCVGTAYVLPE-ENEPTK 486
            +RLL   T E      ++  E+   + +    D S         +GTA  +P  E+ P +
Sbjct: 1230 IRLLVPGTLETAWQKAVEPGEHILCVKNVQIRDQSTGALLSMLAIGTA--MPGGEDTPCR 1287

Query: 487  GRILVFIV-----EDGKL----QLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLR 537
            GRIL+F +      DG +    +L  EK +K A  ++ + +G  + AI  K+  + W   
Sbjct: 1288 GRILLFAIMWERARDGGVRWRGELKCEKPSKMACSAIESVDGTFMVAIGTKLTAHSW--- 1344

Query: 538  DDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG--AIEERARDYN 595
             DG + L     +   +    +    +F++ GDL KSI  + +K  +G   + +  +DY 
Sbjct: 1345 -DG-KHLNPIAFYDTPLYTTTLCCVKNFLLCGDLHKSIRFVRWKDSQGEKTLSQLGKDYE 1402

Query: 596  ANWMSAVEILDDD---IYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN-- 650
                 A E + D      L A+ N N    +   + A   +  +L     YH G  +   
Sbjct: 1403 VLDCIASEFMIDGGTLSLLAADANGNAHVFQYAPKLAESWKGDKLLPKSAYHAGSLIRKM 1462

Query: 651  -RFRHGSLVMRLPDSDVGQIP----TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
             RF+ G          VG+       V FG+ +G +G+ + +    +L LEKLQ  +R  
Sbjct: 1463 VRFQIG----------VGEQKQNRHAVFFGSSDGGLGIFSPVDEHTFLNLEKLQDAMRSN 1512

Query: 706  IKGVG------GLNHEQWRSFNNEKKTV----DAKNFLDGDLIESF 741
            I          GLN + +R+  + + +V      +  +DG L+  F
Sbjct: 1513 IVASSNSINPLGLNSKTYRALKSSEGSVARQTPPRTIVDGGLLSKF 1558



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 23/147 (15%)

Query: 34  LGPIVDFCV-----VDLERQGQGQVVTCSGAYKDGSLRIVRNGIG---INEQASVELQGI 85
           + P+VD  V     V  +   + ++V   G  K+G+L I+  GI    + E  S  L G+
Sbjct: 679 ISPVVDLTVGASAPVGTDLDPRTELVAACGHGKNGALAILTRGITPELVTEVESGALPGL 738

Query: 86  KGMWSLRSSTDDP-----------FDTFLVVSFISETRILAMNLEDELEETEIE-GFCSQ 133
           +  W+ R+  D+            FD  L++S  S    + +   +EL E   E  F   
Sbjct: 739 RACWATRTEDDNDGTVRPKRKDELFDEHLILSLSSTKTTMVLETGEELREVSKEVDFIVD 798

Query: 134 TQTLFCHDAIYN--QLVQVTSGSVRLV 158
            +TL C + I+N   + QVT   +R  
Sbjct: 799 EETLAC-ERIFNGRAIAQVTKTKIRFT 824


>gi|393907594|gb|EJD74706.1| hypothetical protein LOAG_18016 [Loa loa]
          Length = 398

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 479 PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
           PE  +PT            +++ + +KE KG V SL + NG LL  + QK+  + W+ +D
Sbjct: 103 PEPGQPTSKH---------RIKTLYDKEQKGPVTSLCSCNGYLLTGMGQKV--FIWLFKD 151

Query: 539 DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANW 598
           +  + + S    H ++  L +  R +  +  D+ +S++LL Y+ E  A+   +RD  ++ 
Sbjct: 152 NNLQGI-SFLDMHFYVHQL-IGVR-NLALACDMYRSVALLRYQEEYKALSLASRDMRSDV 208

Query: 599 ---MSAVEILDDD----IYLGAENNFNLFTVRKNSEGATDEERG--RLEVVGEYHLGEFV 649
              M+A  I+D+     +      N  +F    N    T E  G  +L +  E ++G  V
Sbjct: 209 QPPMAAQFIIDNKQMGFVMSDEAANIAIF----NYLPETLESLGGEKLTLRAEINIGTVV 264

Query: 650 NRF--RHGSLVMRLPDSDVGQI--PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
           N F    G +     ++++  +   +V+F +++G  G +  L  + +  L  LQ  +  +
Sbjct: 265 NSFIRVKGHISSGFVENELFSLERQSVLFASLDGSFGFLRPLTEKVFRRLHMLQQLMSSM 324

Query: 706 IKGVGGLNHEQWRSFNNEKKT--VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEEL 763
           +    GLN +  R+    +    ++ +N +DGD++  +L LS    +++++ +  S   +
Sbjct: 325 VPQPAGLNAKGARAARPPRPNHYLNTRNLVDGDMVMQYLHLSLPEKNDLARKLGTSRYHI 384

Query: 764 CKRVEELTRL 773
              + E+ R+
Sbjct: 385 IDDLIEICRV 394


>gi|71032257|ref|XP_765770.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352727|gb|EAN33487.1| hypothetical protein TP01_0243 [Theileria parva]
          Length = 1504

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 39/274 (14%)

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            +D+ T  +     +  +   + + T+ D I VGDLM S+ +L  K  +  + E  RD+N 
Sbjct: 1220 QDETTLFIDVVANYDSNTFVVSLDTKDDVIFVGDLMTSVKML--KFRDNRLLETCRDFNT 1277

Query: 597  NWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF--RH 654
             W +++  +D+   L +++  N    +K     TD++  R +  G +H GE VN+   R 
Sbjct: 1278 LWTTSLAAVDNSSCLVSDDLGNFLLFKKVQHPTTDQQSIRFDKQGLFHHGEVVNKILKRT 1337

Query: 655  GSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPHE----------------------- 690
               V  + +S + +     F   N V+    S  P E                       
Sbjct: 1338 QMSVQHVANSRMSRSNPREFMVSNRVVSESESNNPSETLNVNEYTNLFKSFFTCATTSGS 1397

Query: 691  -----------QYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIE 739
                        +L L  L+  +  V K +G +     R+F +    +  K F+DGDL+E
Sbjct: 1398 LLQVCFFDDLNMFLKLSLLEHTMHLVQKDLGNIPSRNQRNFEDLHSNIPTKGFVDGDLVE 1457

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            +FL L  +    + +TM ++   L  ++  L  L
Sbjct: 1458 AFLKLPDSLKKWVFETMLINSRHLGVKLSSLESL 1491


>gi|70945139|ref|XP_742421.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56521397|emb|CAH76894.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 435

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 128/307 (41%), Gaps = 38/307 (12%)

Query: 384 IDDIQKLHIRSIPLGEHPRRIC-HQEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEF 442
           +++I + +I+ IP      +I  H+E       C  + +    ++    +   +     F
Sbjct: 1   LNEINETYIQKIPFYRTVEKIAYHKESGLLITSCPPEEKHKTNKNLKQIICFFNPHQNSF 60

Query: 443 ISTYPLDTFEYGCSILSCSFSDDSNVY---------YCVGTAYVLPEENEPTKGRILVFI 493
             +Y + + +Y  S + C +  + ++Y          CVGTA +    +EP+ G I +F 
Sbjct: 61  KYSYIIPS-KYNVSSI-CVYQINKDIYPNKSSINTLICVGTANINDRVSEPSSGHIYIFF 118

Query: 494 VEDGKLQLIAEKETK------GAVYSLNAFNGKLLAAINQK----------IQLYKWM-- 535
            +  K  L   K         G +  L  F  KL+  IN            I L K++  
Sbjct: 119 AK-KKANLFEIKHIYTHNVNVGGITHLKQFYDKLITTINNTVVILDISEFLINLDKYVDN 177

Query: 536 -----LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
                L +DGT    +       I++L V    ++IVVGD+M S+++L Y      + E 
Sbjct: 178 TNKPKLENDGTIVDVASFTPSSWIMSLDV--IENYIVVGDIMTSVTILSYDFNNSILTEV 235

Query: 591 ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            RDY+  W + V  L    +L ++   N    +K+S    DE+  +L  V  ++ G  VN
Sbjct: 236 CRDYSNVWCTFVCALSKSHFLVSDMESNFLVFQKSSIKYNDEDSFKLSRVALFNHGHVVN 295

Query: 651 RFRHGSL 657
           +    SL
Sbjct: 296 KMLPVSL 302


>gi|148697643|gb|EDL29590.1| cleavage and polyadenylation specific factor 1, isoform CRA_b [Mus
            musculus]
          Length = 1311

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1088 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1147

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1148 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1201

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1202 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1261

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1262 AVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1307



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 384 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 443

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 444 VTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTM 503

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 504 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 548


>gi|354491124|ref|XP_003507706.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 2 [Cricetulus griseus]
          Length = 1388

 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1165 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1224

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1225 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 1278

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1279 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1338

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1339 AVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1384



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 34/165 (20%)

Query: 26  EVLERYVNLGPIVD-------FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
           EV +  +N+GP  +       F   +   +   ++V CSG  K+G+L +++  I      
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 522

Query: 79  SVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETRIL 114
           + EL G   MW++                        ++  D     FL++S    T IL
Sbjct: 523 TFELPGCYDMWTVIAPVRKEEEEAPRAESTEQESTTPKAEEDGRRHGFLILSREDSTMIL 582

Query: 115 AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
                 E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 583 QTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 625


>gi|148697644|gb|EDL29591.1| cleavage and polyadenylation specific factor 1, isoform CRA_c [Mus
            musculus]
          Length = 1388

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1165 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1224

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1225 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1278

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1279 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1338

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1339 AVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1384



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 34/165 (20%)

Query: 26  EVLERYVNLGPIVD-------FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
           EV +  +N+GP  +       F   +   +   ++V CSG  K+G+L +++  I      
Sbjct: 463 EVCDSMLNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 522

Query: 79  SVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETRIL 114
           + EL G   MW++                        ++  D     FL++S    T IL
Sbjct: 523 TFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMIL 582

Query: 115 AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
                 E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 583 QTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 625


>gi|148697642|gb|EDL29589.1| cleavage and polyadenylation specific factor 1, isoform CRA_a [Mus
            musculus]
          Length = 1417

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1194 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1253

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1254 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVVWENK 1307

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1308 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1367

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
              +N LDG+L+  +L LS     E++K +  +
Sbjct: 1368 AVRNVLDGELLNRYLYLSTMERSELAKKIGTT 1399



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 36/167 (21%)

Query: 26  EVLERYVNLGPIVDFCVVD---LERQGQG------QVVTCSGAYKDGSLRIVRNGIGINE 76
           EV +  +N+GP  +  V +   L  + Q       ++V CSG  K+G+L +++  I    
Sbjct: 490 EVCDSMLNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGYGKNGALSVLQKSIRPQV 549

Query: 77  QASVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETR 112
             + EL G   MW++                        ++  D     FL++S    T 
Sbjct: 550 VTTFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTM 609

Query: 113 ILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
           IL      E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 610 ILQTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 654


>gi|194474008|ref|NP_001124043.1| cleavage and polyadenylation specificity factor subunit 1 [Rattus
            norvegicus]
 gi|149066087|gb|EDM15960.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
            isoform CRA_a [Rattus norvegicus]
          Length = 1386

 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1163 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1222

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1223 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 1276

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1277 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1336

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1337 AVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 1382



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 34/165 (20%)

Query: 26  EVLERYVNLGPIVD-------FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
           EV +  +N+GP  +       F   +   +   ++V CSG  K+G+L +++  I      
Sbjct: 461 EVCDSMLNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 520

Query: 79  SVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETRIL 114
           + EL G   MW++                        ++  D     FL++S    T IL
Sbjct: 521 TFELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMIL 580

Query: 115 AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
                 E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 581 QTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 623


>gi|302694047|ref|XP_003036702.1| hypothetical protein SCHCODRAFT_63425 [Schizophyllum commune H4-8]
 gi|300110399|gb|EFJ01800.1| hypothetical protein SCHCODRAFT_63425 [Schizophyllum commune H4-8]
          Length = 1396

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 206/508 (40%), Gaps = 82/508 (16%)

Query: 311  LGTQPITLRTF----SSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAA 366
            L  Q   LRTF     +     VF   DRP  I +++K      V +    H   +  +A
Sbjct: 891  LAEQKKALRTFVPFACAGAPAGVFFTGDRPHWIVATDK----GGVQMYPSGHAAVYAFSA 946

Query: 367  FP------DSLAIAKEGELTIGTIDDIQ---KLHIRSIPLGEHPRRICHQEQSRTF-AIC 416
                    + L  ++EG+     I + +    L +R IP G     I ++  S    A  
Sbjct: 947  CTLWERSTEFLIYSEEGQTLCEWITEYEIGRPLPMRHIPRGRAYSNIVYEPASSMIVAAA 1006

Query: 417  SLK----------NQSCAEES--------EMHFVRLLDDQTFEFISTYPLDTFEYGCSIL 458
            SL+          NQ  A +         E   + L+  + +  +  Y   T E+  + +
Sbjct: 1007 SLRARFASFDEDGNQIWAPDGPGITEPTVECSTLELISPEVWATVDGYEFATNEF-VNTM 1065

Query: 459  SC----SFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG--------KLQ 500
             C    + S ++ V  +  VGT+ V   E+   KG   +F    +V D         +L+
Sbjct: 1066 ECVPLETVSTEAGVKHFIAVGTSIVR-GEDLAVKGATYIFEVVEVVPDQSNGPKRWYRLK 1124

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
            L    + KG V +L   N  L++++ QKI +  + L +        + G    +    ++
Sbjct: 1125 LRCRDDAKGPVTALCGINNYLVSSMGQKIFVRAFDLDERLVGVAFMDVG----VYVTSLR 1180

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
               + +++GD+++ I  + ++ +   +    RD +    + V+      +  AE    + 
Sbjct: 1181 ALKNLLLIGDVVRGIQFVAFQEDPYKLVTLGRDVSRMCATTVD------FFFAEEALAIV 1234

Query: 621  TVRKNS--------EGATDEERGRLEVV-GEYHLGEFVNRFRHGSLVMRLPDSDVGQIP- 670
            T  +N           A D   GRL +   E++L      FR  +L+ R    D   IP 
Sbjct: 1235 TTDENGVMSMYNYDPEAPDSHDGRLLLKQTEFNLH---TDFRTSTLIARRTKDD-PIIPQ 1290

Query: 671  -TVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
              +IFG  +G +  +  +P +    L+ LQ  L + ++ V GLN +  R   NE  +   
Sbjct: 1291 GILIFGGTDGTLSCLTPVPDDAAKRLQPLQLQLTRNMQHVAGLNPKALRIVRNEHVSRPL 1350

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTM 756
            +K  LDG+LI  F  L  TR DE+++ +
Sbjct: 1351 SKGILDGNLIAYFEHLPITRQDEMTRQI 1378


>gi|114318675|gb|ABI63336.1| putative splicing factor 3b [Hordeum vulgare subsp. vulgare]
          Length = 379

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 17/274 (6%)

Query: 171 SPPGYSVNVATANASQVLLATGGGHLVYLEIG-DGILTEVKHAQLEYEISCLDINPIGEN 229
           +P   ++    +N  QV++A  GG L+Y E+   G L EV+   +  +++CL I P+ E 
Sbjct: 1   TPGKKTITKVGSNRLQVVIALSGGELIYFEMDMTGQLMEVEKQDMSGDVACLAIAPVPEG 60

Query: 230 PSYSQIAAVGMWTDISVRIFSL-PDLNLITKEHLGGEIIPRSVLLCAFE-------GISY 281
              S+  AVG + D ++RI SL PD  L           P S+L    +       G  Y
Sbjct: 61  RQRSRFLAVGSY-DNTIRILSLDPDDCLQPLSVQSVSSAPESLLFLEVQASVGGEDGADY 119

Query: 282 -----LLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRP 336
                L   L +G L    ++M TG+L+D +   LG +P  L      +   +   S RP
Sbjct: 120 PANLFLNAGLQNGVLFRTNVDMVTGQLSDTRSRFLGLRPPKLFPCIVSHRQAMLCLSSRP 179

Query: 337 TVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDI-QKLHIRSI 395
            + Y      L + ++   +     F+S    + +       L I TI+ + +  +  SI
Sbjct: 180 WLGYIHQGHFLLTPLSCDTLESAASFSSDQCSEGVVAVAGDALRIFTIERLGETFNETSI 239

Query: 396 PLGEHPRRICHQEQSRTFAIC-SLKNQSCAEESE 428
           PL   PR+     + +  A+  S K    AE+ E
Sbjct: 240 PLRYTPRKFVILPKKKYLAVIESDKGAFSAEQRE 273


>gi|238880502|gb|EEQ44140.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 1168

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 146/709 (20%), Positives = 285/709 (40%), Gaps = 97/709 (13%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +++ + S +   D +LV+S    ++ L +++ + +E+ E   F     T+         +
Sbjct: 481  IFTTKLSLESANDEYLVISSSLSSKTLVLSIGEVVEDVEDSEFVLDQPTIAVQQVGIASV 540

Query: 148  VQVTSGS---VRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDG 204
            VQ+ S     VR+V+   +    +W  P G ++  AT N  QVL+A     +VY EI D 
Sbjct: 541  VQIYSNGIKHVRMVNGNKK--TTDWFPPAGITITHATTNNQQVLIALSNLSVVYFEI-DA 597

Query: 205  ILTEVKHAQLEYEI-SCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHL- 262
               ++   Q   EI + +    I EN S     A+   +D ++++ SL + N +  + L 
Sbjct: 598  TDDQLIEYQDRLEIATTITAMAIQENISEKSPFAIIGCSDETIQVVSLQEHNCLEIKSLQ 657

Query: 263  ---GGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
                     + +     E  +++   + +G      ++   G L++ +   +G++P++L 
Sbjct: 658  ALSANSSSLKMLKSSGKE--THVHIGMENGVYARIKIDTINGNLSNSRVKYIGSKPVSLS 715

Query: 320  TFS-SKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAF-PDSLAIAKEG 377
                S     + A S  P + Y        + +   ++++   F S     + +   K+ 
Sbjct: 716  VIKFSSEIEGILAISSAPWISYLYRDSFKITPLLEIDITNGSSFISEDIGGEGIVGIKDN 775

Query: 378  ELTIGTI-------DDIQKLHIRSIPLGEHPRRICHQEQSRTFAI-----------CSLK 419
             L I ++       D  Q L I +  L   PR++     +R F             C++ 
Sbjct: 776  NLIIFSVGKEDSVFDPSQDLTIVTTKLRYTPRKMI-TYGNRLFISESEYNVQGPFKCNIN 834

Query: 420  NQSCAEESEMHF---------------VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD 464
                    E ++               ++++D ++ + I +  LD  E   S+ + SF+ 
Sbjct: 835  GDVKENVDEDYYGAFGYEWKQNSWASCIQVVDSKSNQVIQSLQLDGNESIVSMSAVSFNK 894

Query: 465  DSN-----VYYCVGTA---YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNA 516
             S       +  VG      +LP  N   K  +  F +    LQL+ + E       L  
Sbjct: 895  TSTPSVPASHLVVGVCTNQTILP--NSYDKSYLYTFKIGKKHLQLVHKTELDHIPQVLEN 952

Query: 517  FNGKLLAAINQKIQLYKWMLRDDGTRELQSEC----GHHGHILALYVQTRGDFIVVGDLM 572
            F  KLL A    I+LY     D G ++L  +         +I  +  QT  + I++ D  
Sbjct: 953  FQDKLLVASGNHIRLY-----DIGQKQLLKKSTTIIDFSTNINKIIPQT--NRIIICDSH 1005

Query: 573  KSISLLIYKHEEGAIE--ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR------- 623
            KS S++  K +E   +    A D     ++++  LD D  +G +   N+F  R       
Sbjct: 1006 KS-SIVFAKFDESQNQFVPFADDVMKRQITSIMNLDIDTLIGGDKFGNIFVTRIDEDISK 1064

Query: 624  ---------KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
                     K  +G  +    +L+ + E+H+G+ +  F  G L       ++    +VI+
Sbjct: 1065 QADDDWTILKTQDGILNSCPYKLQNLIEFHIGDIITSFNLGCL-------NLAGTESVIY 1117

Query: 675  GTVNGVIGVIASLPHEQYL-FLEKLQTNLRKVIKGVGGLNHEQWRSFNN 722
              + G IG++  L  +  +  L  LQ  +++    + G +H + RS+ N
Sbjct: 1118 TGLQGTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYN 1166


>gi|348555856|ref|XP_003463739.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform 2 [Cavia porcellus]
          Length = 1387

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564  DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
            +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 1164 NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 1223

Query: 621  TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                  E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 1224 VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGATEGPSKKSVVWENK 1277

Query: 672  --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
                F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 1278 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 1337

Query: 729  -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
              +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 1338 AVRNVLDGELLNRYLYLSTMERGELAKKIGTTPDIILDDLLETDRV 1383



 Score = 39.7 bits (91), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 34/165 (20%)

Query: 26  EVLERYVNLGPIVD-------FCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQA 78
           EV +  +N+GP  +       F   +   +   ++V CSG  K+G+L +++  I      
Sbjct: 462 EVCDSMLNIGPCANAAVGEPAFLSEENSPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVT 521

Query: 79  SVELQGIKGMWSL------------------------RSSTDDPFDTFLVVSFISETRIL 114
           + EL G   MW++                         +  D     FL++S    T IL
Sbjct: 522 TFELPGCYDMWTVIAPVRKEEEETPKAEGSEQEPSAPEAEDDGRRHGFLILSREDSTMIL 581

Query: 115 AMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ-LVQVTSGSVRLV 158
                 E+ E +  GF +Q  T+F  +   N+ +VQV+   +RL+
Sbjct: 582 QTG--QEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLL 624


>gi|119195757|ref|XP_001248482.1| hypothetical protein CIMG_02253 [Coccidioides immitis RS]
 gi|121769680|sp|Q1E5B0.1|CFT1_COCIM RecName: Full=Protein CFT1; AltName: Full=Cleavage factor two protein
            1
 gi|392862316|gb|EAS37050.2| protein CFT1 [Coccidioides immitis RS]
          Length = 1387

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 37/372 (9%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 486
            ++LL  +T+  + +Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1015 IKLLSPRTWSVVDSYELGDAERVMCMKTINMEISEITHEMKDMLVVGTATVRGEDITP-R 1073

Query: 487  GRILVF-IVE----------DGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF I+E          + KL++ A+ + KGAV +++   G+  L+ A  QK  +  
Sbjct: 1074 GSIYVFEIIEVAPDPDRPETNRKLKIFAKDDVKGAVTAVSGIGGQGFLIMAQGQKCMVRG 1133

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K I    Y  E   +    +D
Sbjct: 1134 --LKEDGSLLPVAFMDMQCYVKVLKELQGTGLCIMGDALKGIWFAGYSEEPYRLTLFGKD 1191

Query: 594  YNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
                 + A + L D   +Y L A+++  +  +  + E  T  +  RL     +H G F +
Sbjct: 1192 NEYLQVIAADFLPDGKRLYILVADDDCTIHVLEYDPEDPTSSKGDRLLHRSSFHTGHFTS 1251

Query: 651  RF-----RHGSLVMRLP---DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLEKLQ 699
                      S     P   D DV  +P    V+  +  G IGV+  L  + Y  L  LQ
Sbjct: 1252 TMTLLPEHSSSPSADDPEEDDMDVDYVPKSYQVLVTSQEGSIGVVTPLTEDSYRRLSALQ 1311

Query: 700  TNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVS 759
            + L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R  EI+  +   
Sbjct: 1312 SQLVTSMEHPCGLNPKAYRAV--ESDGFGGRGIVDGNLLLRWLDMGVQRKAEIAGRVGAD 1369

Query: 760  VEELCKRVEELT 771
            +E +   +E ++
Sbjct: 1370 IESIRVDLETIS 1381


>gi|50292811|ref|XP_448838.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74608786|sp|Q6FLQ6.1|RSE1_CANGA RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49528151|emb|CAG61808.1| unnamed protein product [Candida glabrata]
          Length = 1296

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 46/306 (15%)

Query: 19  DAKGSYVEVLERYVNLGPI-VDFCVVD------LERQGQGQVVTCSGAYKDGSLRIVRNG 71
           D +   + V+ ++ N+ PI ++ C+++      +  QG  +            + I+RN 
Sbjct: 382 DNENENISVISKHTNINPIALNLCLMENMPLTFMHFQGGNRTTDSE------KVNIIRNA 435

Query: 72  IGINEQASVEL-QGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGF 130
           I + E  S  L QG+  ++++++     + +F+ ++ I+ T ++      ++ +  IE +
Sbjct: 436 IPLKEYVSSPLPQGVSNIFTIKTQYQ-SYHSFIFLTMINFTTVIL-----KIADDSIEQY 489

Query: 131 CSQTQTLFCHDAIY--------NQLVQVTSGSVRLVSSTSRELRN-----EWKSPPGYSV 177
              + T    D +         N ++QV     R +   S++  N     +W  P G S+
Sbjct: 490 IPASDTFKLKDDMTIHVATMGDNSIIQVCKDEFRQILLDSKDEENFKMNLKWYPPAGVSI 549

Query: 178 NVATANASQVLLATGGGHLVYLEIGDGILTEVKH-AQLEYEISCLDINPIGENPSYSQIA 236
             A +N SQ++LA     +VYL++ +  L E K+  +L   I+ L +  + +N   S+I 
Sbjct: 550 LSAVSNFSQLILALSNNEIVYLQLENNTLIEYKNRPELPDVITSLAL--LNDNTKKSEIL 607

Query: 237 AVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGH-LLNFL 295
           AVG  +D  V + SL     I  E +  E    +V+  A + I   L  L  GH L+N  
Sbjct: 608 AVGT-SDNMVNVLSLE----IVDEAISFE----TVVFQALDAIPSSLLILNQGHKLVNLH 658

Query: 296 LNMKTG 301
           + ++ G
Sbjct: 659 IGVEDG 664


>gi|167386195|ref|XP_001737658.1| spliceosomal protein sap [Entamoeba dispar SAW760]
 gi|165899468|gb|EDR26056.1| spliceosomal protein sap, putative [Entamoeba dispar SAW760]
          Length = 1079

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 140/632 (22%), Positives = 257/632 (40%), Gaps = 72/632 (11%)

Query: 36  PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 95
           P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 321 PLTSVDVVDSHEVFQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 378

Query: 96  DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 155
           +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 379 EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 436

Query: 156 RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 211
             + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 437 ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 489

Query: 212 -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISVRIFSLPDLNLITKEHLG 263
            A++E  I   +I  +     EN    ++A +   GM   +++   S     L T   + 
Sbjct: 490 LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILETNITVE 549

Query: 264 GEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
           GE    S++L  F  IS  +L   +G  DG+   + +N K  EL   K +  G  P+   
Sbjct: 550 GE--AESIILTQFNEISEPFLFLGIGMKDGYCYGYKINGKNSELMWCKLI--GNDPVVFG 605

Query: 320 TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
            +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A     EL
Sbjct: 606 QYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDEL 665

Query: 380 T---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLD 436
           T   IG++DD  +      PL   PR+I       T  +CS       +     +  ++D
Sbjct: 666 TVIAIGSLDD--RFTYDEQPLLYTPRKIIKSNYFPTTVLCS-------DNKSNLYNPIID 716

Query: 437 DQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YCVGTA 475
           ++T EF      +D  E G           SI    F  D  +            C  ++
Sbjct: 717 NETNEFNERKIGVDLQEDGKWASEVGIINNSIFKSYFKTDEAIICGAHVSFKKKQCFISS 776

Query: 476 YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
            V  +  +  KG   + +      +LI +   +    +L +   +LLA I   ++LY   
Sbjct: 777 QV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICRALTSCGERLLAGIGTTLRLY--- 831

Query: 536 LRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 594
             D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +    +D 
Sbjct: 832 --DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKDR 889

Query: 595 NANWMSAVEILDDDIYLGAENNFNLFTVRKNS 626
             + ++A  ILD+   +G +   ++F    N+
Sbjct: 890 IWHSLTASTILDETSTIGFDKLGSVFITETNT 921


>gi|149066088|gb|EDM15961.1| cleavage and polyadenylation specific factor 1, 160kDa (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 241

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)

Query: 564 DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLF 620
           +FI+  D+MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL 
Sbjct: 18  NFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLM 77

Query: 621 TVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT--------- 671
                 E        RL    ++H+G  VN F       R P     + P+         
Sbjct: 78  VYMYLPEAKESFGGMRLLRRADFHVGAHVNTF------WRTPCRGAAEGPSKKSVMWENK 131

Query: 672 --VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
               F T++G IG++  +  + Y  L  LQ  L  ++    GLN   +R  + +++ +  
Sbjct: 132 HITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRILQN 191

Query: 729 -AKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +N LDG+L+  +L LS     E++K +  + + +   + E  R+
Sbjct: 192 AVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRV 237


>gi|327287424|ref|XP_003228429.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Anolis carolinensis]
          Length = 1294

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)

Query: 448  LDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----IVEDG 497
            L+ +E+   + + S   +  V     Y  VGT  +  EE    +GRIL+      + E G
Sbjct: 1048 LEEWEHVTCMKTVSLKSEETVSGLKGYIAVGTCLMQGEEVT-CRGRILIMDIIEVVPEPG 1106

Query: 498  ------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDD---GTRELQSEC 548
                  K +++ EKE KG V +L   NG L++AI QKI L  W L+D+   G   + ++ 
Sbjct: 1107 QPLTKNKFKVLYEKEQKGPVTALCHCNGYLVSAIGQKIFL--WSLKDNDLTGMAFIDTQL 1164

Query: 549  GHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD 608
              H  I      +  +FI+  D+MKSISLL Y+ E   +   +RD     +  V+ + D 
Sbjct: 1165 YIHQMI------SVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYCVDFMVDS 1218

Query: 609  IYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
              LG   ++ + NL       E        RL    ++H+G  VN F
Sbjct: 1219 CQLGFLVSDRDRNLLVYMYLPEAKESFGGMRLLRRADFHVGAHVNAF 1265


>gi|85682925|gb|ABC73438.1| CG13900 [Drosophila miranda]
          Length = 341

 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 37/288 (12%)

Query: 456 SILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIVED---GKLQLIAEKETKGAVY 512
           +++  S + D   Y  VG A  L      ++G  L     D     L+ +   E      
Sbjct: 67  AMVKFSVAADGRYYLAVGIARDLQLNPRISQGGYLDIYKIDPTCSSLEFMHRTEIDEIPG 126

Query: 513 SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSEC-GHHGHILALYVQTRGDFIVVGDL 571
           +L  F G+LLA   + +++Y     D G +++  +C   H     + +Q  G  + V D+
Sbjct: 127 ALCGFQGRLLAGCGRMLRIY-----DLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDV 181

Query: 572 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATD 631
            +S+  L Y+  E  +   A D +  W++A  +LD D  +   + F   ++++     TD
Sbjct: 182 QESVFFLRYRRAENQLIIFADDTHPRWVTATTLLDYDT-IAIADKFGNLSIQRLPHSVTD 240

Query: 632 E------------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTV 672
           +            +RG L       E +  +H+GE +   +  +L+        G    +
Sbjct: 241 DVDEDPTGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLI-------PGGSEAL 293

Query: 673 IFGTVNGVIGVIASL-PHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS 719
           I+ T+NG +G        E Y F + L+ ++R     + G +H  +RS
Sbjct: 294 IYSTLNGTVGAFVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRS 341


>gi|326501484|dbj|BAK02531.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 101

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 44/67 (65%)

Query: 370 SLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
           SLAIA+EGEL+IG+IDD+QKLHIR+I L E  R I HQEQS T         + A ES  
Sbjct: 4   SLAIAEEGELSIGSIDDVQKLHIRTILLIEQARSIFHQEQSMTRCFAFSSTPTIAGESFA 63

Query: 430 HFVRLLD 436
              RL++
Sbjct: 64  KIHRLME 70


>gi|196476797|gb|ACG76262.1| damaged-DNA binding protein DDB p127 subunit [Amblyomma americanum]
          Length = 74

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 10/73 (13%)

Query: 712 LNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM----------NVSVE 761
           ++H  WRSF+ E+KT     F+DGDLIESFLDLSR +M E+ + +          + +V+
Sbjct: 2   IDHAFWRSFSTERKTEQPVGFIDGDLIESFLDLSRDKMQEVVQGIQMDDGSGMKKDATVD 61

Query: 762 ELCKRVEELTRLH 774
           +L K +EEL+R+H
Sbjct: 62  DLIKIIEELSRIH 74


>gi|407851810|gb|EKG05523.1| damage-specific DNA binding protein, putative [Trypanosoma cruzi]
          Length = 313

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 36/154 (23%)

Query: 635 GRLEVVGEYHLGEFVNRFRHGS--------LVMRLPDSDVGQI--PTVIFGTVNGVIGVI 684
           G+LE   +YHLG+ V   + GS        + + +P + +  I  P V+FGT +G  G I
Sbjct: 81  GKLETSAQYHLGDMVTAMQLGSFAPCSVTNIAVPIPTTLIPGICGPQVVFGTSHGAFGTI 140

Query: 685 ASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRS------------------------- 719
             + +E YL L+ L+  +  V+  +GG  H  +R                          
Sbjct: 141 TPVSNETYLLLKALEVAVSSVVPALGGFEHVTYREVLRAGQERGYSRNASFENANVVSSG 200

Query: 720 -FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEI 752
            F+  +K   ++    GDLIESFL  S+T    I
Sbjct: 201 VFDKRRKRYLSRCVCSGDLIESFLTFSQTIQQRI 234


>gi|308805673|ref|XP_003080148.1| cleavage and polyadenylation specificity factor (ISS) [Ostreococcus
            tauri]
 gi|116058608|emb|CAL54315.1| cleavage and polyadenylation specificity factor (ISS), partial
            [Ostreococcus tauri]
          Length = 1473

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 89/381 (23%), Positives = 166/381 (43%), Gaps = 42/381 (11%)

Query: 425  EESEMHF-VRLLDDQTFEFISTYPLDTFEYGCSILSCSFSD----DSNVYYCVGTAYVLP 479
            ++ E+ + VRLL   + + +  + L+  E+   + +    D     S  Y  VGTA  +P
Sbjct: 837  DDMELQYSVRLLVPGSLDCVWQHTLEPGEHVQCVRNVQLKDINTGHSLSYLAVGTA--MP 894

Query: 480  E-ENEPTKGRILVFIV--------EDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
              E+ P +GR+ +F +         DG   K Q+   +E K A  +L    G L+ A+  
Sbjct: 895  GGEDTPCRGRVYLFNMVWERDSESADGYRWKGQVCCVREAKMACTALEGLGGHLIVAVGT 954

Query: 528  KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE--EG 585
            K+ ++ W    DG REL S       I  + +    +FI+VGDL K +    +K    E 
Sbjct: 955  KLTVHTW----DG-RELNSVAFFDTPIHTVSINVVKNFILVGDLEKGLHFFRWKDTGFEK 1009

Query: 586  AIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGE 642
            ++ + ++D+    + + E L D      LG++ + N  T   + +     +  +L     
Sbjct: 1010 SLIQLSKDFERMDVVSSEFLIDGTTLSLLGSDMSGNARTFGYDPKSIESWKGQKLLPRAA 1069

Query: 643  YHLGEFVNR---FRHGSLVMRLPDSDVGQIP-----TVIFGTVNGVIGVIASLPHEQYLF 694
            YH+G  ++R   F       ++  +D G+        V FGT++G +G+        Y  
Sbjct: 1070 YHVGSPISRMVRFNVEGSKSKMASTD-GKPKGANRFAVFFGTLDGALGIFMPTDPVTYEK 1128

Query: 695  LEKLQTNLRKVIKGVGGLNHEQWRS---FNNEKKTVDAK-NFLDGDLIESFLDLSRTRMD 750
            L  +Q  L   ++   G N   +R+   F  +   + A  + LDG L+  F  L+ +   
Sbjct: 1129 LLAIQRELTTAVRSPIGCNPRTFRTPKVFEGKHVQLRAPLDVLDGGLLSKFETLTFSEQV 1188

Query: 751  EISKTMNVSVEELCKRVEELT 771
            +I+ +  V  +     +++L+
Sbjct: 1189 KIASSAQVDRDLTLGLIQQLS 1209


>gi|218194461|gb|EEC76888.1| hypothetical protein OsI_15095 [Oryza sativa Indica Group]
          Length = 1503

 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 90/411 (21%), Positives = 167/411 (40%), Gaps = 87/411 (21%)

Query: 440  FEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF--I 493
            +E  ST P+  FE   ++    L  + + ++     +GTAYVL  E+   +GR+L+F  +
Sbjct: 1095 WETKSTIPMQLFENALTVRIVTLHNTTTKENETLLAIGTAYVL-GEDVAARGRVLLFSFM 1153

Query: 494  VEDGKLQLIAE---KETKGAVYSLNAFNGKLLAA-------------------------- 524
              +    L+ E   KE+KGAV ++ +  G LL A                          
Sbjct: 1154 KSENSQNLVTEVYSKESKGAVSAVASLQGHLLIASGPKITLNKWTGAELTAVAFYDAPLH 1213

Query: 525  ---------------INQKIQLYKW---------MLRDDGTRE-LQSECGHHGHILALY- 558
                           I++ I    W         + +D G+ +   +E    G  L+L  
Sbjct: 1214 VVSLNIVKNFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLSLVA 1273

Query: 559  ------VQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG 612
                  VQ + +F++ GD+ KSI  L +K +   +   A+D+ +    A E L D   L 
Sbjct: 1274 SDSDKNVQVK-NFVLFGDIHKSIYFLSWKEQGSQLSLLAKDFGSLDCFATEFLIDGSTLS 1332

Query: 613  -----AENNFNLFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDV 666
                 ++ N  +F     +    +  +G +L    E+H+G  + +F     +  LP   +
Sbjct: 1333 LVASDSDKNVQIFYY---APKMVESWKGQKLLSRAEFHVGAHITKFLR---LQMLPTQGL 1386

Query: 667  GQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSF-- 720
                T    ++FG ++G IG IA +    +  L+ LQ  L   +  V GLN   +R F  
Sbjct: 1387 SSEKTNRFALLFGNLDGGIGCIAPIDELTFRRLQSLQRKLVDAVPHVCGLNPRSFRQFHS 1446

Query: 721  NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELT 771
            N +       N +D +L+  +  LS     ++++ +  +  ++     +++
Sbjct: 1447 NGKGHRPGPDNIIDFELLAHYEMLSLDEQLDVAQQIGTTRSQILSNFSDIS 1497



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 21/141 (14%)

Query: 15  NLQPDAKGSYVEVLERYVNLGPIVDFC----------VVDLERQGQGQVVTCSGAYKDGS 64
           +L+   K SY+ V +  +N+GP+ DF            +   +Q   ++V CSG  K+GS
Sbjct: 499 SLESAQKISYI-VRDALINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGS 557

Query: 65  LRIVRNGIGINEQASVELQGIKGMWSL-------RSSTDDPFDTFLVVSFISETRILAMN 117
           L +++  I  +    VEL   +G+W++       + + D+ +  +L++S   E R + + 
Sbjct: 558 LSVLQQSIRPDLITEVELPSCRGIWTVYYKSYRGQMAEDNEYHAYLIISL--ENRTMVLE 615

Query: 118 LEDELEE-TEIEGFCSQTQTL 137
             D+L E TE   +  Q  T+
Sbjct: 616 TGDDLGEVTETVDYFVQASTI 636


>gi|401426063|ref|XP_003877516.1| putative CPSF-domain protein [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322493761|emb|CBZ29051.1| putative CPSF-domain protein [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 1347

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 137/348 (39%), Gaps = 73/348 (20%)

Query: 472  VGTAYVLPEENEPTKGRILVFIVED----GKLQLIAEKETKGAVYSLNA---FNGKLLAA 524
            +G+++  P+E     GRI    + +     +L LIA K+  GA+    A   + G++   
Sbjct: 925  IGSSFTFPDEQRARSGRITWCALREEHQRQRLHLIASKDIGGALQCCAAVPHYKGRIALG 984

Query: 525  INQKIQLYKWMLRDDGTRELQSECG---HHGHILALYVQTRGDFIVVG-DLMKSISLLIY 580
            +N  + LY W   +D T   +  C        ++ LY  +    ++V  D+  S   +  
Sbjct: 985  VNGCVCLYNWNT-EDQTFVAEERCRIGLTVTKLIPLYDTSLAASVLVALDVRHSAFFIEV 1043

Query: 581  KHEEGAIEERARDYNANWMSAVEILDDDIYLGAEN--------NFNLFTV---------R 623
               +G+++   RD +        ++D  I   AEN        NF    V          
Sbjct: 1044 DTLQGSLKVLCRDADLRG-----VMDGHIGSDAENLCLFDDSLNFTAMKVVPLPVEAGDG 1098

Query: 624  KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSL----VMRLPDSD------------VG 667
              +   +   + R EV  + HLG+ V   R G      +M  P +              G
Sbjct: 1099 DAAAAGSVTAQYRFEVRAQCHLGDLVTCVRPGCFAATSLMEAPAACSLSRNRLLLPGIAG 1158

Query: 668  QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR--------- 718
              P ++F T +G  GV+  +    YL L  L+ +L + ++ VGGL+H+ +R         
Sbjct: 1159 --PQLVFATAHGGFGVVTPVQAATYLVLRALEASLVRTLQPVGGLSHQAFREVLRAGQER 1216

Query: 719  -----------SFNNEK-KTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
                       +   E+ +  +  N +DGD++E F+ L  +    I +
Sbjct: 1217 GVSYLASKTGCALTRERLRRYEPLNTVDGDMVELFVQLPPSDKKHICR 1264


>gi|313215162|emb|CBY42850.1| unnamed protein product [Oikopleura dioica]
          Length = 228

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 564 DFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG-----AENNFN 618
           ++ +VGD+ + I+LL ++ E   I + +R   A  ++AV IL D   +G      + N  
Sbjct: 5   NYALVGDIQQGITLLRHQGERNCISQISRARRAGEVTAVGILLDGNQVGLVSTDMQRNLQ 64

Query: 619 LFTVR---KNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFG 675
           ++  +   K S G     R     +G+  +  + +  R      ++  ++        + 
Sbjct: 65  VYMYKPDQKESNGGKQLVRQADINLGKRVISIWNSLGRQNDTFTKVALTENDARHVTFYA 124

Query: 676 TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFL 733
            ++G IG I  +  + +  LE LQT ++  +   GGLN  ++R   NE + ++  AKN +
Sbjct: 125 GLDGSIGDIVPVSEKVFRRLEMLQTLVQSHLPHYGGLNPREYRYCTNEYRDLENAAKNII 184

Query: 734 DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
           DGDL+E F  LS T   ++S+ + V+ E L   + ++ R
Sbjct: 185 DGDLLERFNGLSFTEQTDLSRKIGVTREALLDDMMDVQR 223


>gi|392558419|gb|EIW51607.1| hypothetical protein TRAVEDRAFT_176174 [Trametes versicolor FP-101664
            SS1]
          Length = 1431

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 111/515 (21%), Positives = 215/515 (41%), Gaps = 65/515 (12%)

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK---KLLYSNVNLKEVSHM 359
            L ++K++S    P        +  + VF   DRP+ I S++K   K+  S  ++ +    
Sbjct: 921  LAEQKRISRLLVPFVTSPAPGQTFSGVFFTGDRPSWILSTDKGGVKVFPSGHSVVQA--- 977

Query: 360  CPFNSAAFPDS----LAIAKEGELTIGTIDDIQ---KLHIRSIPLGE-HPRRICHQEQSR 411
              F +++  +S    L  ++EG   +  + D+Q    L  RS+P    +   +     S 
Sbjct: 978  --FTTSSLWESRGDFLLYSEEGPSLVEWMPDVQLDGHLPARSVPRSRPYSNVVFDASTSL 1035

Query: 412  TFAICSLKNQSCAEESEMHFV----------RLLDDQTFEFIST---YPLDTFEYG---- 454
              A  S +N+  + + + + V           L +  T E IS      +D +E+     
Sbjct: 1036 IVAASSFQNRFASYDEDGNVVWEPDSPNISSPLCECSTLELISPDGWITMDGYEFAPNEF 1095

Query: 455  ----CSILSCSFSDDSNV--YYCVGTAYVLPEENEPTKGRILVF----IVEDG------- 497
                 SI   + S +S +  +  VGT  +   E+   KG + +F    +V D        
Sbjct: 1096 VNCIVSIPLETMSTESGMKDFIAVGTT-INRGEDLAVKGAVYIFEIVEVVPDPSTHVKRW 1154

Query: 498  -KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILA 556
             +L+L+   + KG V  L   NG L++++ QKI +  + L +        + G    +  
Sbjct: 1155 WRLKLLCRDDAKGPVSFLCGINGYLVSSMGQKIFVRAFDLDERLVGVAFLDVG----VYV 1210

Query: 557  LYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENN 616
              ++   + +V+GD +KS+  + ++ +   +    +D     ++  ++   D  L     
Sbjct: 1211 TSLRAVKNLLVIGDAVKSVWFVAFQEDPYKLVVLGKDPQLCCITRADLFFADGQLSIVTC 1270

Query: 617  FNLFTVRKNSEGATDEERG---RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPT-- 671
                 VR  +    D E      L    E+H G+  + +R   LV R P +   +IP   
Sbjct: 1271 DEEGIVRLYAYDPHDPESKSGQHLLRRTEFH-GQ--SEYRSSMLVARRPKNGDPEIPQAR 1327

Query: 672  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AK 730
            ++ G+V+G +  +  +       L  LQ  L + ++ V  LN + +R   NE  +   +K
Sbjct: 1328 LVCGSVDGSLSTLTYVDEAASKRLHLLQGQLIRTVQHVAALNPKAFRMVRNEYVSRPLSK 1387

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCK 765
              LDG+L+ +F DL   R +E+++ +      + K
Sbjct: 1388 GILDGNLLATFEDLPIARQNEVTRQIGTDRATVLK 1422


>gi|296806499|ref|XP_002844059.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238845361|gb|EEQ35023.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 1348

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 174/434 (40%), Gaps = 60/434 (13%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAI-CSLKNQ-SCAEESEMHF-----------------VR 433
            R IPLGE    I +   S ++ I  S+K      E+ E H                  V+
Sbjct: 912  RKIPLGEQVDCIVYSSASESYVIGTSVKEDFKLPEDDESHTEWQNEFITFLPQLERGTVK 971

Query: 434  LLDDQTFEFISTYPLDTFEYGCSILSC---------SFSDDSNVYYCVGTAYVLPEENEP 484
            LLD + +      P          ++C           + +      VG+A V  E+  P
Sbjct: 972  LLDPKNWSIADIAPSSHELEPAERITCIEVIRLEISEITHERKDMVVVGSAIVKGEDIVP 1031

Query: 485  TKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAF--NGKLLAAINQKIQL 531
             KG I VF + D            +L+L A +E KGAV +L+     G L+ A  QK  +
Sbjct: 1032 -KGCIRVFEIIDVVPDPDHSEMNKRLKLFAREEVKGAVTALSGIGSQGFLIVAQGQKCMV 1090

Query: 532  YKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERA 591
                L++DG+    +      ++  L         +VGD +K +    Y  E   ++   
Sbjct: 1091 RG--LKEDGSLLPVAFKDAQCYVSVLKELKGTGMCIVGDAIKGLWFTGYSEEPYKLDLFG 1148

Query: 592  RDYNANWMSAVEILDDD--IY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
            ++     + A + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H+G F
Sbjct: 1149 KENENIAVIAADFLPDGNRLYVLVADDDCNLHVLQYDPEDPSSSKGDRLLHRNVFHVGHF 1208

Query: 649  VNRFR---HGSLVMRLP------DSDVGQIPT---VIFGTVNGVIGVIASLPHEQYLFLE 696
             +       GS     P      D+D    P+   ++     G +G+I  L  + Y  L 
Sbjct: 1209 ASTMTLLPQGSHTPHSPADRDAMDTDAPLPPSKYQILMTFQTGSVGIITPLNEDSYRRLL 1268

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
             LQ+ L   ++   GLN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +
Sbjct: 1269 ALQSQLVNALEHPCGLNPRGYRAVESD-GIGGQRGMIDGNLLLRWLDMGAQRKAEIAGRV 1327

Query: 757  NVSVEELCKRVEEL 770
               V  +   +E+L
Sbjct: 1328 GADVGAIRMDLEKL 1341


>gi|407039323|gb|EKE39583.1| CPSF A subunit region protein, putative [Entamoeba nuttalli P19]
          Length = 1108

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 167/790 (21%), Positives = 316/790 (40%), Gaps = 92/790 (11%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 95
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 350  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 407

Query: 96   DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 155
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 408  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 465

Query: 156  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 211
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 466  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 518

Query: 212  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISVRIFSLPDLNLITKEHLG 263
             A++E  I   +I  +     EN    ++A +   GM   +++   S     L T   + 
Sbjct: 519  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILETNITVE 578

Query: 264  GEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
            GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P+   
Sbjct: 579  GE--AESIVLTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDPVVFG 634

Query: 320  TFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGEL 379
             +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A     EL
Sbjct: 635  QYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGITNDEL 694

Query: 380  T---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFVRLLD 436
            T   IG++DD  +      PL   PR++       T  +CS       +     +   +D
Sbjct: 695  TVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYNPTID 745

Query: 437  DQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YCVGTA 475
            ++T EF      +D  E G           SI    F  D  +            C  ++
Sbjct: 746  NETNEFNERKIGIDLQEDGKWASEVGIIDNSIFKSYFKTDEAIICGAHVSFKKKQCFISS 805

Query: 476  YVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWM 535
             V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++LY   
Sbjct: 806  QV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRLY--- 860

Query: 536  LRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDY 594
              D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +    +D 
Sbjct: 861  --DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSITEKDR 918

Query: 595  NANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG----ATDEERGRLEVVGEYHLGEFVN 650
              + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G+ V 
Sbjct: 919  IWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVGDVVT 977

Query: 651  RFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLEKLQT 700
                  +   + D+        QI      +I+  + G IGV+      E   F  KL+ 
Sbjct: 978  SVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLEM 1037

Query: 701  NLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSV 760
             ++     +   + + +R  N     V     +DGDL + F  +      +I+  + ++ 
Sbjct: 1038 EIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNLEMTP 1092

Query: 761  EELCKRVEEL 770
             ++  + E+ 
Sbjct: 1093 VQIQLKCEQF 1102


>gi|345566738|gb|EGX49680.1| hypothetical protein AOL_s00078g169 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1407

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 106/488 (21%), Positives = 187/488 (38%), Gaps = 60/488 (12%)

Query: 329  VFAASDRPTVIYSSNKKL--LYSNVNLKEVSHMCPFNSAAFPDS-LAIAKEGELTIGTID 385
             F A D PT I  S+K L  LY  +    V  + PFN+       L I  +G   +    
Sbjct: 913  AFMAGDTPTFITKSSKTLPKLY-KLQGGMVRSLSPFNTKETERGFLYIDSKGTARVCHFP 971

Query: 386  DIQKLHI---RSIPLGEHPRRICHQEQSRTFAICSLK------------------NQSCA 424
            ++   H    + IPL   P  + + +    + +  L                   +++  
Sbjct: 972  EVSMEHTWLSQRIPLERTPTSLTYYDPKNVYVVSVLSTSKPEVDDEDFQMEEGLVDETLL 1031

Query: 425  EESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLP 479
             E E   + ++   T+     Y     E    + +        + +  V   VGT  +L 
Sbjct: 1032 PELETGHLVMISPVTWTTTDRYEFPVHEVPFVVKAVELEISEVTKERKVLIAVGTG-LLR 1090

Query: 480  EENEPTKGRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGKLLAAINQK 528
             EN P +G + VF V D            K +LI+ +E KG V +L   +G LL    QK
Sbjct: 1091 GENSPARGAVYVFDVIDVVPEIGKPETGKKFKLISREEVKGVVSTLAGMDGYLLITHGQK 1150

Query: 529  IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
              +    L++DG+    +    + H      +T    ++ GD++K +S + +  E   + 
Sbjct: 1151 CMIRG--LKEDGSLLPVAFMDMNTHTTV--AKTLEKMVMFGDVLKGVSFVGFSEEPYKMI 1206

Query: 589  ERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL 645
               +D     ++A + L       ++ A+   N+  ++ + E        RL   GE + 
Sbjct: 1207 LFGKDPRQLSITAGDFLPAGTACYFVVADAQSNIHVLQYDPENPKSIHGNRLLPKGEIYC 1266

Query: 646  GEFVNRF----RHGSLVMRLPDSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEK 697
            G  V       +  SL     + D+ +        +F T+ GV G ++S+    Y  L  
Sbjct: 1267 GHEVKSICILPKKKSLFTEPDEDDMDEDEDEEFLCMFSTMTGVFGTVSSITESMYRRLNV 1326

Query: 698  LQTNLRKVIKGVGGLNHEQWRS--FNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
            +Q  +    + + GLN   +R+  F N   +   +  LDG L+  +L L   R  E++  
Sbjct: 1327 IQGQITNTGEHIAGLNPRAYRAAKFRN-TSSEPMRAILDGKLLVRWLMLGAGRRKELAGR 1385

Query: 756  MNVSVEEL 763
               S E L
Sbjct: 1386 AGTSEEML 1393


>gi|67473926|ref|XP_652712.1| splicing factor 3b subunit 3 [Entamoeba histolytica HM-1:IMSS]
 gi|56469590|gb|EAL47325.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica
            HM-1:IMSS]
          Length = 1108

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 164/794 (20%), Positives = 319/794 (40%), Gaps = 100/794 (12%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 95
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 350  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 407

Query: 96   DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 155
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 408  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 465

Query: 156  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 211
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 466  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 518

Query: 212  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISV----RIFSLPDLNLITK 259
             A++E  I   +I  +     EN    ++A +   GM   +++    +   + ++N+  +
Sbjct: 519  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILEINITVE 578

Query: 260  EHLGGEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQP 315
                GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P
Sbjct: 579  ----GE--AESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDP 630

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            +    +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A   
Sbjct: 631  VVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGIT 690

Query: 376  EGELT---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 432
              ELT   IG++DD  +      PL   PR++       T  +CS       +     + 
Sbjct: 691  NDELTVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYN 741

Query: 433  RLLDDQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YC 471
              +D++T EF      +D  E G           S+    F  D  +            C
Sbjct: 742  PTIDNETNEFNERKIGIDLQEDGKWASEVGIIDNSLFKSYFKTDEAIICGAHVSFKKKQC 801

Query: 472  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 531
              ++ V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++L
Sbjct: 802  FISSQV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRL 859

Query: 532  YKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
            Y     D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +   
Sbjct: 860  Y-----DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSIT 914

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG----ATDEERGRLEVVGEYHLG 646
             +D   + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G
Sbjct: 915  EKDRIWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVG 973

Query: 647  EFVNRFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLE 696
            + V       +   + D+        QI      +I+  + G IGV+      E   F  
Sbjct: 974  DVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFS 1033

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            KL+  ++     +   + + +R  N     V     +DGDL + F  +      +I+  +
Sbjct: 1034 KLEMEIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNL 1088

Query: 757  NVSVEELCKRVEEL 770
             ++  ++  + E+ 
Sbjct: 1089 EMTPVQIQLKCEQF 1102


>gi|449706784|gb|EMD46555.1| splicing factor 3b subunit 3, putative [Entamoeba histolytica KU27]
          Length = 1079

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 164/794 (20%), Positives = 319/794 (40%), Gaps = 100/794 (12%)

Query: 36   PIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSST 95
            P+    VVD     Q +     G+    SL+I+ +G+  +E  S+ LQ  + +W+L+   
Sbjct: 321  PLTSIDVVDSHEVLQIRAFVGKGS--RSSLKILTHGLNPDECMSLSLQHPRNIWTLKPYN 378

Query: 96   DDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSV 155
            +     ++V+   ++T +L   L D L++    G     QTL     I   LVQ+ +  +
Sbjct: 379  EQTHQ-YVVIGLENQTYVLK-TLPDALKQCPECGIRPNVQTLHAGMFIDGTLVQIHAHGI 436

Query: 156  RLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGH----LVYLEIGDGILTEVKH 211
              + +   E  +E       ++ V T+++ QV++A         +VY E      TE K 
Sbjct: 437  ITILN---EKLSEQDPGAQRTILVGTSSSCQVVIALKNAQSKCEIVYFEYN----TETKK 489

Query: 212  -AQLEYEISCLDINPIG----ENPSYSQIAAV---GMWTDISV----RIFSLPDLNLITK 259
             A++E  I   +I  +     EN    ++A +   GM   +++    +   + ++N+  +
Sbjct: 490  LAEVERRIIRSNIIAMALGDFENGKAKKVAYICDNGMANILTLEKESKFLQILEINITVE 549

Query: 260  EHLGGEIIPRSVLLCAFEGIS--YLLCALG--DGHLLNFLLNMKTGELTDRKKVSLGTQP 315
                GE    S++L  F  IS  +L   +G  DG    + +  K  EL   K +  GT P
Sbjct: 550  ----GE--AESIILTQFNEISEPFLFLGIGMKDGCCYGYKVIGKNSELMWCKLI--GTDP 601

Query: 316  ITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK 375
            +    +       V  +S     +YS   ++ ++ ++ + +  + PF +    +S+A   
Sbjct: 602  VVFGQYEFGGNIGVIMSSSTMIFMYSYFSRIEFTPISYQPLKALAPFITDFSGESIAGIT 661

Query: 376  EGELT---IGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEMHFV 432
              ELT   IG++DD  +      PL   PR++       T  +CS       +     + 
Sbjct: 662  NDELTVIAIGSLDD--RFTYDEQPLLYTPRKVIKSNYFPTTVLCS-------DNKSNLYN 712

Query: 433  RLLDDQTFEFIS-TYPLDTFEYG----------CSILSCSFSDDSNVY----------YC 471
              +D++T EF      +D  E G           S+    F  D  +            C
Sbjct: 713  PTIDNETNEFNERKIGIDLQEDGKWASEVGIIDNSLFKSYFKTDEAIICGAHVSFKKKQC 772

Query: 472  VGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQL 531
              ++ V  +  +  KG   + +      +LI +   +   ++L +   +LLA I   ++L
Sbjct: 773  FISSQV--KHYKKMKGECWINVYNLKTFKLIHKTPVEDICHALTSCGERLLAGIGTTLRL 830

Query: 532  YKWMLRDDGTRELQSECGHHGHILAL-YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEER 590
            Y     D G + L  +C   G    +  ++  GD IVVG +      + Y  +   +   
Sbjct: 831  Y-----DLGKQILIRKCELDGFPSIINSLEVIGDKIVVGTVATGFIYVNYDSDANILSIT 885

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEG----ATDEERGRLEVVGEYHLG 646
             +D   + ++A  ILD+   +G +   ++F    N+       TD      E+V ++++G
Sbjct: 886  EKDRIWHSLTASTILDETSTIGFDKLGSVFITETNTNSNQLNLTDIIPLSNEIV-QWYVG 944

Query: 647  EFVNRFRHGSLVMRLPDSD-----VGQIP----TVIFGTVNGVIGVIASLP-HEQYLFLE 696
            + V       +   + D+        QI      +I+  + G IGV+      E   F  
Sbjct: 945  DVVTSVSVNEIWKGITDNTNEYTFEEQIKENKNVIIYSCLMGRIGVLIPFNFREDVEFFS 1004

Query: 697  KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            KL+  ++     +   + + +R  N     V     +DGDL + F  +      +I+  +
Sbjct: 1005 KLEMEIKNNYSPLLSNSFDSYRGTNYPGIGV-----IDGDLCDYFNQMDPKLQLQIANNL 1059

Query: 757  NVSVEELCKRVEEL 770
             ++  ++  + E+ 
Sbjct: 1060 EMTPVQIQLKCEQF 1073


>gi|50549733|ref|XP_502337.1| YALI0D02717p [Yarrowia lipolytica]
 gi|74634908|sp|Q6CAH5.1|RSE1_YARLI RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|49648205|emb|CAG80525.1| YALI0D02717p [Yarrowia lipolytica CLIB122]
          Length = 1143

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 159/732 (21%), Positives = 284/732 (38%), Gaps = 106/732 (14%)

Query: 88   MWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQL 147
            +W++R       D ++V+S+ + T  L + + D + ET   G      TL C  ++ +  
Sbjct: 459  LWTMRDGAGS--DKYIVLSYANAT--LVLEIGDSVVETTSSGLTLDKPTLHC-GSVGSSY 513

Query: 148  VQVTSGSVRLVSSTSRELRNE------WKSPPGYSVNVATANASQVLLATGGGHLVYLEI 201
            VQV +  + ++   SRE  +E      W +P G  V  A++++ QV+L      L Y E 
Sbjct: 514  VQVMTDGMNVIP-MSREGSSESLPATKWTAPSG-QVICASSSSHQVVLGLTSS-LFYFED 570

Query: 202  GDGILTEVKHAQLEYEIS----CLDINPIGENPSYSQIAAVGMWTDISVRIFSL-PDLNL 256
              G  +E+      YE+S     + + P+      S   AV    D +VRI S+ P+   
Sbjct: 571  TPG--SELSAYDGAYELSSPPTAVAVAPVPAGRVRSPFVAVAT-DDETVRIVSVDPESMF 627

Query: 257  ITKEHLGGEIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR--KKVSLG-- 312
             T    G      S+ L +   + YL   L +G  +   L+  TGE+     K V LG  
Sbjct: 628  ETVAVQGLMATASSLALLSVGQVLYLHMGLANGVYVRVELDPLTGEIVGSWSKFVGLGRL 687

Query: 313  -TQPITLRT-----FSSKNTT----HVFAASDR--PTVIYSSNKKLLYS--NVNLKEVSH 358
               P+T         SS+       HV A SD   PT     N    ++   ++ + +  
Sbjct: 688  SVVPVTCGGEESILVSSRGVKTCLGHVNATSDTWVPT---GGNSAPFFALDAISGEPLDL 744

Query: 359  MCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSL 418
               F++   P  +       L I T++  QK     + L    +R+  Q  + T  I   
Sbjct: 745  AHSFHTQDCPHGVIGVAGSTLKIFTVNTAQKWTENEVKLEGTAKRLI-QHDATTLTITQN 803

Query: 419  KNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVL 478
             ++  +          +D+           D      SI    F D    Y+ VG +   
Sbjct: 804  PDRLVS----------VDNGAVGITK----DLGGPPTSICEVMFGDGKR-YFAVGGSRDG 848

Query: 479  PEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
                  T G I +F      L  +   E +    +L A+NG L+A I  +++LY   L+ 
Sbjct: 849  SPGTSGTSGYISIF--SSSSLGHVHTTEVEAPPLALCAYNGLLVAGIGSQVRLYALGLKQ 906

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA--IEERARDYNA 596
               R+ Q E       LA +  +  + + VGD+ +S+++ +   E+    I     D  +
Sbjct: 907  V-LRKAQIELSKRVTCLAHFAGS--NRVAVGDIRQSVTVCVVLEEDSGHVIYPLVCDKIS 963

Query: 597  NWMSAVEILD-DDIYLGAE-NNFNLFTVRKNSEGATDEERGRLEVV-------GEYHLGE 647
              ++ +  +D + + LG     F +  +   +    DE+   + +        G  H   
Sbjct: 964  RQVTCLFFVDYETVALGDRFGGFTMLRIPSEASKLADEDHNAVHLRQLEPTLNGPAHF-- 1021

Query: 648  FVNRFRHGSLVMRLPDSDVGQIPTVI------------FGTVNGVIGVIASLPHEQYLFL 695
               RF H      +    +  +P  I             GTV+  + V++    +Q   L
Sbjct: 1022 ---RFDH------VASFHIEDVPVAIHMYNDYLVVCGLLGTVSAFVPVVSP---KQSRDL 1069

Query: 696  EKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKT 755
            + ++  +     G+ G +H ++R +      V  K  +DGD++   L +   R +E+ + 
Sbjct: 1070 KTIEKFVCASDPGLMGRDHGRFRGYY-----VPVKEVVDGDMLREVLVMDEKRREEVGEK 1124

Query: 756  MNVSVEELCKRV 767
              + VE    RV
Sbjct: 1125 TGLGVEGAVGRV 1136


>gi|237839083|ref|XP_002368839.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
 gi|211966503|gb|EEB01699.1| hypothetical protein TGME49_067710 [Toxoplasma gondii ME49]
          Length = 2136

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 62/224 (27%)

Query: 471  CVGTAYVLPEENEPTKGRILVFIVE---DGKL--QLIAE-KETKGAVYSLNAFNGKLLAA 524
            CVGTA V+  ++EP +G I++  V    DG+L  QL A   E +  V  L  F G LLAA
Sbjct: 1674 CVGTAEVMASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLLLAA 1733

Query: 525  INQKIQLYKWMLRDDGTRELQSE------------------------------------- 547
             N +++L+      +G   L++E                                     
Sbjct: 1734 CNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTEEKG 1793

Query: 548  --------------CGHHGHILALYVQTRGDFIV-VGDLMKSISLLIYKHEEGAIEERAR 592
                          C H  +     + T  D IV +GD++ S  LL +  ++ A +E AR
Sbjct: 1794 RELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKEIAR 1853

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRK----NSEGATDE 632
            D NA W  AV  L  +++  A+ + N++ + +     SEG  +E
Sbjct: 1854 DTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRREE 1897



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 673  IFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
            ++ +  G IG +  +P EQ +  L  LQ  + KV K +G L+   + S      TV +K 
Sbjct: 2050 LWASSEGAIGHLLQIPDEQTFARLAVLQDAVTKVTKSIGKLSAVAFHSVKVGTATVPSKG 2109

Query: 732  FLDGDLIESFLDL 744
            F+DGD++E FL+ 
Sbjct: 2110 FIDGDILERFLEF 2122



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 32/137 (23%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ-ASVELQ 83
           +++L+ + NLGPIVD C+ ++E   Q  ++   G  +  SLR +R+G+ ++   ASV L 
Sbjct: 751 LQLLQVFPNLGPIVDCCLAEVEGLDQRLLIVACGHGRSTSLRFIRSGLALHASCASVALH 810

Query: 84  G-IKGMWSL-------------------RSSTDDPF-----DTFL------VVSFISETR 112
             +  +W+L                   RS T   F     D  L      V++F  ETR
Sbjct: 811 APVHRLWTLDLSPYAIAASATGMRISGRRSHTRGEFSKTRADALLARGPIAVLAFPHETR 870

Query: 113 ILAMNLEDELEETEIEG 129
           +LA  L+   + +  +G
Sbjct: 871 VLAWTLKPRGDRSNPKG 887


>gi|328773280|gb|EGF83317.1| hypothetical protein BATDEDRAFT_21894 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1673

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 40/314 (12%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+P+ N P   R         K + +  ++ +    ++   N  LLAAI  KI +Y+   
Sbjct: 1373 VVPDPNNPQTNR---------KFKHVDSEDDRSPFSAICTVNDYLLAAIGPKIIMYQL-- 1421

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
             +DG  E+        ++    + +  + I + D+ KS+  + ++ E   +    RD + 
Sbjct: 1422 -EDG--EITGVAFLDVNVFVTSLSSVKNLIQICDIQKSVWFVAFQEEPAKLAVLGRDVHP 1478

Query: 597  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
                A  +L DD  L    A+ + NL T+    +        RL   GE HLG+ V++F 
Sbjct: 1479 LQGYAANMLIDDNQLALLVADGDKNLHTMIYAPDNVQSLGGERLIRKGEIHLGQHVSKF- 1537

Query: 654  HGSLVMRLPDSDVGQIPTVIF--------GTVNGVIGVIASLPHEQYLFLEKLQTNLRKV 705
                 +R+    + +   ++F         T++G + +I  +    +  L  L + +   
Sbjct: 1538 -----IRMRRKPLLRNDAIVFSKQYLNVAATLDGALEIITPVSERIFKRLYGLYSRMVTS 1592

Query: 706  IKGVGGLNHEQWRSFNNEKKTVDAKNF---------LDGDLIESFLDLSRTRMDEISKTM 756
            I+ + GLN   +R   +  + +    F         LDGDL+  ++ LSRT+   ++K +
Sbjct: 1593 IEHIAGLNPRGFRQAQHRVRPITLSGFIGPPGPRGILDGDLLYEYVRLSRTQQRGLAKAI 1652

Query: 757  NVSVEELCKRVEEL 770
                + L   + E+
Sbjct: 1653 GSKDDRLMDDLLEV 1666


>gi|221502136|gb|EEE27880.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 2131

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 62/224 (27%)

Query: 471  CVGTAYVLPEENEPTKGRILVFIVE---DGKL--QLIAE-KETKGAVYSLNAFNGKLLAA 524
            CVGTA V+  ++EP +G I++  V    DG+L  QL A   E +  V  L  F G LLAA
Sbjct: 1669 CVGTAEVIASDSEPKEGLIILLDVRRGTDGRLVVQLAAHIHELRSGVQQLRPFQGLLLAA 1728

Query: 525  INQKIQLYKWMLRDDGTRELQSE------------------------------------- 547
             N +++L+      +G   L++E                                     
Sbjct: 1729 CNHRVRLFGLRRELEGAAGLEAEMEGDSPQASEVHAGDRGRSSAGRRQGARARDRTEEKG 1788

Query: 548  --------------CGHHGHILALYVQTRGDFIV-VGDLMKSISLLIYKHEEGAIEERAR 592
                          C H  +     + T  D IV +GD++ S  LL +  ++ A +E AR
Sbjct: 1789 RELCEMLKARLELVCSHSSNAFVSSMDTWHDEIVCLGDMVASAVLLRFSPKDNAFKEIAR 1848

Query: 593  DYNANWMSAVEILDDDIYLGAENNFNLFTVRK----NSEGATDE 632
            D NA W  AV  L  +++  A+ + N++ + +     SEG  +E
Sbjct: 1849 DTNACWTLAVSCLSPNLHYLADADRNIWLLERASLLGSEGRREE 1892



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 673  IFGTVNGVIGVIASLPHEQ-YLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKN 731
            ++ +  G IG +  +P EQ +  L  LQ  + KV K +G L+   + S      TV +K 
Sbjct: 2045 LWASSEGAIGHLLQIPDEQTFARLAVLQDAVTKVTKSIGKLSAVAFHSVKVGTATVPSKG 2104

Query: 732  FLDGDLIESFLDL 744
            F+DGD++E FL+ 
Sbjct: 2105 FIDGDILERFLEF 2117



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 25  VEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQ-ASVELQ 83
           +++L+ + NLGPIVD C+ ++E   Q  ++   G  +  SLR +R+G+ ++   ASV L 
Sbjct: 751 LQLLQVFPNLGPIVDCCLAEVEGLDQRLLIVACGHGRSTSLRFIRSGLALHASCASVALH 810

Query: 84  G-IKGMWSL 91
             +  +W+L
Sbjct: 811 APVHRLWTL 819


>gi|403373826|gb|EJY86839.1| hypothetical protein OXYTRI_09860 [Oxytricha trifallax]
          Length = 1380

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/360 (19%), Positives = 151/360 (41%), Gaps = 29/360 (8%)

Query: 328  HVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAK---------EGE 378
            H   + D P +   S+K+ +YS        H    N      ++ I           + +
Sbjct: 817  HKLKSDDGPIIYVQSSKQAIYSLTRQTLQMHFINENDIKQARTMMIEDKCIFVYENTQNQ 876

Query: 379  LTIGTIDDIQKLHIRSIPLGEHPRRICH-QEQSRTFAICSLKNQSCAE--ESEMHFVRLL 435
            +  G +D+     ++ I   +   +I     ++   A+  + N    +     ++ + LL
Sbjct: 877  IIFGQLDNFNSTQLKQIKFDKEVCKISLVPNENLMIALMEVPNYEYLDLNSPAVNQIALL 936

Query: 436  DDQTFEFISTYPLDT---------FEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTK 486
            D  T E +  + L           FE   S  + S  + S  Y  +GTA +  +E  P+K
Sbjct: 937  DSSTMEMLELFSLQKEEIASCLYLFEKKPSSATLSIRNQSR-YVAIGTAIIKTDEYLPSK 995

Query: 487  GRILVFIVEDGKLQLIAEK--ETKGAVYSLNAF--NGKLLAAINQKIQLYKWMLRDDGTR 542
            GR+++F ++  + +LI +   +T G+V S+     +  L+  +N  +QL+   ++    +
Sbjct: 996  GRLMIFEIDTRQRKLIIKHSFQTNGSVQSIAMLRDDKYLVLGVNNDLQLFSMQIKPQEIK 1055

Query: 543  ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEE--GAIEERARDYNANWMS 600
                +    G  +   +    + +VVGD+M+++    +K ++    + E A   ++ W++
Sbjct: 1056 LQLLQTLQVGTAIQ-QIFAVNNTVVVGDIMRALYTFDFKEQKQNKLLNESAHTNHSIWVN 1114

Query: 601  AVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMR 660
             +  L +   +  +   N+F   KN     D E+ +L +V    +GE   +   GSL ++
Sbjct: 1115 TMLPLSESNTMVFDKECNMFVFNKNLLPTNDHEKFKLNMVACMKIGEEATKAIFGSLAIQ 1174



 Score = 38.9 bits (89), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 672  VIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKV-IKGVGGLNHEQWRSFNNEKKTVDAK 730
            VI+GT  G +GV+  +P + +  L  +  ++ K+ +   G L    ++    E    +  
Sbjct: 1272 VIYGTNLGSLGVVCEIPTKTFKILNLILKSMEKLEVNFYGKLPRINYKIAKTESLKQEPT 1331

Query: 731  NFLDGDLIESFLDLSRTRMDEISKTMNVS-----VEELCKRVEELTRLH 774
            N +DGD +ESFL + + +   + + +N       ++E+ + +E L  LH
Sbjct: 1332 NVIDGDYVESFLIMDQKQQSLVLQGINKDFGAEFIKEIRQVIEVLKDLH 1380


>gi|326471884|gb|EGD95893.1| protein kinase subdomain-containing protein [Trichophyton tonsurans
            CBS 112818]
          Length = 1398

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 1094 VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1144

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 1145 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 1204

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-- 651
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 1205 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 1264

Query: 652  -FRHGSLVMRLP----DSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
               HG+     P      D   +P     ++     G I VI  L  + Y  L  LQ+ L
Sbjct: 1265 LLPHGAYTPSAPVDEDAMDTDSLPPSKYQILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1324

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1325 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1383

Query: 763  LCKRVEEL 770
            +   +E+L
Sbjct: 1384 IRTDLEKL 1391


>gi|326477251|gb|EGE01261.1| protein kinase subdomain-containing protein [Trichophyton equinum CBS
            127.97]
          Length = 1267

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 130/308 (42%), Gaps = 24/308 (7%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 963  VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1013

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 1014 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 1073

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-- 651
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 1074 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 1133

Query: 652  -FRHGSLVMRLP----DSDVGQIPT----VIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
               HG+     P      D   +P     ++     G I VI  L  + Y  L  LQ+ L
Sbjct: 1134 LLPHGAYTPSAPVDEDAMDTDSLPPSKYQILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1193

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1194 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1252

Query: 763  LCKRVEEL 770
            +   +E+L
Sbjct: 1253 IRTDLEKL 1260


>gi|399216612|emb|CCF73299.1| unnamed protein product [Babesia microti strain RI]
          Length = 1195

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 138/664 (20%), Positives = 260/664 (39%), Gaps = 81/664 (12%)

Query: 33   NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLR 92
            +L PI+D  V+        Q++  SG  K  ++ I+  G+  +   ++ L  +  ++ + 
Sbjct: 447  SLSPIIDATVIG--GNCTDQLIAVSGIGKSANISILTIGLFFHNICNISLAKVSKLFIIS 504

Query: 93   SSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTS 152
            S    P   FLV   I+ T+     + D+  E       S+   + C     NQL Q+T 
Sbjct: 505  SQ---PEMIFLVA--ITSTQSYYFKMVDQSIE-----LISRGDKIICAFQYNNQLYQLTP 554

Query: 153  GSVRLVS-STSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKH 211
             S+R+ +    R  +  W S       V       +L+ +GG +L  L I      ++ +
Sbjct: 555  NSIRISTIDNPRITKVLWTSDEPI---VHYLKCENMLIISGGYNLSALVIDKSDPIKITY 611

Query: 212  AQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLIT---KEHLGG--EI 266
              ++   S     PI      S IA V     + + + +  ++ LI     + +G   EI
Sbjct: 612  NHIQSFTS-----PI------SAIALVENMNKLHILVATFTNVLLIVDCETKSIGTICEI 660

Query: 267  IPRS-------VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLR 319
              R+       ++      I Y+   L DG+LL +          +R+ V    +     
Sbjct: 661  PTRTSCVGVSDLVYVVKNSIYYIFIGLTDGNLLVYT--------NEREDVRHFLECKGWE 712

Query: 320  TFSSKN----TTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC----PFNSAAF-PDS 370
             F SKN      +    S R T+I      + +S +  + V  +     P     F  D 
Sbjct: 713  FFMSKNFGVYPLYFKHNSQRLTLIGQHVHFVTFSPITGRIVDFLSLEVPPVRDLEFISDD 772

Query: 371  LAIAK-EGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAEESEM 429
            L IA     L +G + D   L +R IP+      I + + S    +   +  S +     
Sbjct: 773  LLIASLTDHLELGKLSDCNSLDVRRIPVSGALDLIEYHQPSNCVIVAFPQLTSESIFPSN 832

Query: 430  HFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRI 489
             ++ +    T   ++TY L+    G SI   +F+  S+    +G +     +  P++GRI
Sbjct: 833  AYIAVYSFVTGLLVTTYYLEQSFEGSSI--STFTRGSDKTLLIGISST-DSDYLPSQGRI 889

Query: 490  LVFIVEDG--------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGT 541
            +  I  +         K      +   G V  +      + A +N  + +   +L     
Sbjct: 890  VACIYNNSTFTFKDSYKFDKDLPEVPSGGVLQICTSKNFVFAGVNHSLVVLTPILHGRSW 949

Query: 542  R------ELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLL-IYKHEEG-AIEERARD 593
                    + SEC      + + +    D +++ D++  + LL I+    G ++EE A+D
Sbjct: 950  EGELSPIYIYSECN-----MIIGIDVCNDLVLLTDIITGVKLLKIFSDTNGDSVEEIAKD 1004

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFR 653
             + +W S  +++D +  L ++   N+  ++   E   DE+   L  + ++HLGE VN+  
Sbjct: 1005 TDTSWCSCAKLIDQNHILVSDTKGNITLLKLIDEPINDEQCYILTKIAKFHLGECVNKIV 1064

Query: 654  HGSL 657
             G  
Sbjct: 1065 IGKF 1068


>gi|196012166|ref|XP_002115946.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
 gi|190581722|gb|EDV21798.1| hypothetical protein TRIADDRAFT_59883 [Trichoplax adhaerens]
          Length = 1187

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 185/470 (39%), Gaps = 111/470 (23%)

Query: 356  VSHMCPFNSAAFPDS-LAIAKEGELTIGTIDDIQKL------HIRSIPLGEHPRRICHQE 408
            V    PFN A  P+  L    E +L I  +D  Q+        +  +PL      I H  
Sbjct: 772  VKCFAPFNIANCPNGFLYFNSEEDLRICVLD--QRFTYDCPWPVHKVPLRNTLHFITHHF 829

Query: 409  QSRTFAICSLKNQSC-------AEESEM-------HFV---------RLLDDQTFEFI-- 443
             ++T+ I S     C        E+ E         F+         +L+  +T+E I  
Sbjct: 830  VTKTYVIISSTMTVCEKMPHITTEDKEFIPVEKGDRFIHAPVEKFCLQLITSETWEIIPD 889

Query: 444  STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVLPEENEPTKGRILVF-----I 493
            +   +  +E+   + S     +  V     +  VGT  V  EE    +GRI++F     +
Sbjct: 890  AEIQMAEWEHVTCLKSVKLKSEETVSGLKEFIAVGTTNVCGEE-VACRGRIVIFDVIEVV 948

Query: 494  VEDGK------LQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE 547
             E GK      ++   +KE KG V ++    G L+ +I QKI  Y W  RD+        
Sbjct: 949  PEPGKPLTKNKIKTYYDKEQKGPVTAITCVEGFLVTSIGQKI--YIWEFRDNKD------ 1000

Query: 548  CGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDD 607
                               ++G  M  I  LIY H       +   +N N+      L  
Sbjct: 1001 -------------------LIG--MAFIDTLIYIHSLD--RHQLEIFNTNFYVNKNQLG- 1036

Query: 608  DIYLGAENNFNLFTVRKN--SEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
              ++  E++   F VR+     G+      R +V     L +  N  +H +         
Sbjct: 1037 --FVAPESHGGQFLVRRAEIQTGSNAHAFFRTKVRA---LNQRQNENKHITW-------- 1083

Query: 666  VGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKK 725
                    FGT++G IG++  +  ++Y  L  LQ  L   ++   GLN + +R+F + +K
Sbjct: 1084 --------FGTLDGSIGLLLPVDEKEYRRLFSLQAKLSIYLEQNAGLNQKAFRTFRSHQK 1135

Query: 726  TV--DAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
             +    +N LDGDL++ +  L      +++K +  + E++   + +LT+L
Sbjct: 1136 KLQNSMRNILDGDLLKRYFHLGFVERRDLAKQIMSTPEQI---INDLTKL 1182



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 45/254 (17%)

Query: 20  AKGSYV-----EVLERYVNLGPIVDFCVVDL----ERQGQGQVVTCSGAYKDGSLRIVRN 70
           AK SY+     EV +R +++GP     +  +    + +   +VV CSG  K+G+L ++  
Sbjct: 368 AKESYLRSYTFEVCDRILHVGPCASIAIGQISTFVQEESDVEVVICSGHDKNGALSVLNK 427

Query: 71  GIGINEQASVELQGIKGMWS-----LRSSTDDPFDT-----FLVVSFISETRILAMNLED 120
           GI     AS +L G   MW+     L    D  F+T     FL++S  + T IL      
Sbjct: 428 GIKPQVVASYDLPGCVDMWTVKDIRLNDENDGDFETENTHKFLIISRDNLTMILRTG--K 485

Query: 121 ELEETEIEGFCSQTQTLFCHDAIY-NQLVQVTSGSVRLVSSTSR----ELRNEWKSPPGY 175
           E+ E E  GF +QT+T+F  +    N ++QVT   V LVS   +    EL NE  SP   
Sbjct: 486 EITEVEQLGFLTQTKTVFAGNLDNGNCIIQVTPYEVILVSKGEKIQQLELENE--SP--- 540

Query: 176 SVNVATANASQVLLATGGG-HLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQ 234
            V  +  +    LL  GG   ++  E+ D           E ++  ++  P+    ++S+
Sbjct: 541 IVFCSLQDPYISLLLEGGSIMMLAFELSDN---------GEKQVKLVNTTPL----NHSR 587

Query: 235 IAAVGMWTDISVRI 248
           IAA  ++ D + R+
Sbjct: 588 IAACCLFQDNNGRM 601


>gi|255075065|ref|XP_002501207.1| predicted protein [Micromonas sp. RCC299]
 gi|226516471|gb|ACO62465.1| predicted protein [Micromonas sp. RCC299]
          Length = 1423

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 145/353 (41%), Gaps = 59/353 (16%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSI----LSCSFSDDSNVYYCVGTAYVLPE-ENEPTK 486
            +RLL   T E    Y +D  E+  SI    L  + +        VGTA  LP  E+ P +
Sbjct: 1051 LRLLVPGTLECAWQYTVDPGEHVQSIRNVQLRNTMTGALQSMLVVGTA--LPGGEDAPCR 1108

Query: 487  GRILVF-----IVEDG---KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRD 538
            GR+L+F     + + G   + QL+  ++ K A  +L    G L  AI  K+ ++ W    
Sbjct: 1109 GRVLIFEVVWQMTDRGTKWQGQLVCVRDAKMACTALEGVGGHLAVAIGTKLIVHSW---- 1164

Query: 539  DGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKH--EEGAIEERARDYNA 596
            DG   L         +  + +    +FI++GD+ K      +K   +E  + + A+D+  
Sbjct: 1165 DG-HSLMPVAFFDTPLHTVTMNVVKNFILLGDIQKGAFFFRWKDTPDEKLLVQMAKDFEG 1223

Query: 597  NWMSAVEILDDDIYLG---AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN--- 650
              + A E L D   L     +   N F    + +     +  +L   G +H+G  V+   
Sbjct: 1224 MDILATEFLVDGSTLSMLTTDMTGNAFIFSYDPKSLESWKGQKLLTKGAFHVGSPVHRMV 1283

Query: 651  RFRHGSLVMRLPDSDVGQIPT------------VIFGTVNGVIGVIASLPHEQYLFLEKL 698
            RFR     ++ P +  GQ  +            V FGT++G +G++  +    +  L+ L
Sbjct: 1284 RFR-----LKAPTAAPGQTISPAEQKAQANRHAVFFGTLDGSLGILVPIEEAAHASLQSL 1338

Query: 699  QTNLRKVIK--GVGGLNHEQWRSFNNEKKTVDAK--------NFLDGDLIESF 741
            Q  L        + GLN    R      KTV+ +        + LDG L+  +
Sbjct: 1339 QRYLTYATPHAALAGLNARTHR----HPKTVEGRPMRQPAPHSLLDGGLLAVY 1387


>gi|66362282|ref|XP_628105.1| contains a UVDDB domain that is present in CPSF_A and damage specific
            DNA binding protein 1 [Cryptosporidium parvum Iowa II]
 gi|46227624|gb|EAK88559.1| contains a UVDDB domain that is present in CPSF_A and damage specific
            DNA binding protein 1 [Cryptosporidium parvum Iowa II]
          Length = 1495

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 543  ELQSECGHHGHILALYVQT-RGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            EL+ +  +  H + ++++   G++I+VGDLM+S+ L  +    G   E  RD +  W+  
Sbjct: 1188 ELKRKETYCTHTMIVFIKILNGEYILVGDLMRSVGLWEFDRYTGKFHEVCRDNSIAWVVE 1247

Query: 602  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL 661
               L  D+YL ++ N NL  + +      DE    L  +   H+GE +  F+ G      
Sbjct: 1248 GIFLSKDMYLISDENRNLRVLMRTLNPENDETYTSLSCIAHLHVGESITTFQQGKFTQAY 1307

Query: 662  PDS 664
            P++
Sbjct: 1308 PET 1310


>gi|344300987|gb|EGW31299.1| hypothetical protein SPAPADRAFT_140061 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 1107

 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 166/381 (43%), Gaps = 36/381 (9%)

Query: 33  NLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIK-GMWSL 91
           +L PI+D       +Q    ++  S  Y    L+ V  GI   E  S  L      +++ 
Sbjct: 374 SLSPILD------AKQTPSNMLVLSSHY----LKQVTRGIPTTEIVSTPLPFTPTSVYTT 423

Query: 92  RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVT 151
           + +     D++LVV+    ++ L +++ + +EE       +   TL       + LVQV 
Sbjct: 424 KLTQASVHDSYLVVTSSLASQTLVLSIGEVVEEVPDSKLVTDQHTLSIQQMGKSSLVQVY 483

Query: 152 SGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEI--GDGILTEV 209
           +  +R +         +W SP G +V  A+ NA+QV++A     +VY EI   D ++   
Sbjct: 484 TNGIRQIGHKV----TDWFSPAGITVTHASTNANQVIIAMSNCEVVYFEIDVDDQLIEYQ 539

Query: 210 KHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPR 269
           +  +L   I+ L I     + + S +A +G   D ++++ SL + + +  + L   +   
Sbjct: 540 QRLELTSSITSLAI-----SDTRSDVAVIGC-ADETIQVVSLAESDCLDVKSLQA-LSAN 592

Query: 270 SVLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHV 329
           +  L   E   ++   + +G      L++K  +L D +   LG++P+++   S  +T  V
Sbjct: 593 ASSLVMIENTVHI--GMENGVYARTKLDIK--QLKDTRVQYLGSRPVSMSRISVGDTAGV 648

Query: 330 FAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTI---GTIDD 386
            A S    + Y+ +   +   +++ ++S    FNS      + I    EL I   GT D 
Sbjct: 649 LAISSSAWIGYTHDTWRIMPLLDI-DISSAASFNSEDIEGIVGI-HGNELVIFSLGTEDG 706

Query: 387 IQKLH---IRSIPLGEHPRRI 404
               H   I+   L   PRR+
Sbjct: 707 FDPSHEWTIKKSRLRYTPRRM 727


>gi|350584885|ref|XP_003126937.3| PREDICTED: splicing factor 3B subunit 3-like [Sus scrofa]
          Length = 425

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 39/272 (14%)

Query: 448 LDTFEYGCSILSCSFSDDSNVYYC-VGTAYVLPEENEPTKGRILVF--IVEDG-KLQLIA 503
           L+  E   S+  C FS+  + +Y  VG A  L        G  +    +V +G KL+ + 
Sbjct: 166 LEQNEAAFSVAVCRFSNTGDDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLH 225

Query: 504 EKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYV---Q 560
           +   +    ++  F G++L  + + +++Y     D G ++L  +C  + HI A Y+   Q
Sbjct: 226 KTPVEEVPAAIAPFQGRVLIGVGKLLRVY-----DLGKKKLLRKC-ENKHI-ANYISGIQ 278

Query: 561 TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGAENNFNLF 620
           T G  ++V D+ +S   + YK  E  +   A D    W++   +LD D   GA+   N+ 
Sbjct: 279 TIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNIC 338

Query: 621 TVR--KNSEGATDE---------ERGRL-------EVVGEYHLGEFVNRFRHGSLVMRLP 662
            VR   N+    DE         +RG L       EV+  YH+GE V   +  +L+    
Sbjct: 339 VVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIP--- 395

Query: 663 DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLF 694
               G   ++++ T++G IG++      + ++
Sbjct: 396 ----GGSESLVYTTLSGGIGILVPFTSHEVIY 423


>gi|198415711|ref|XP_002123169.1| PREDICTED: similar to cleavage and polyadenylation specificity factor
            1, partial [Ciona intestinalis]
          Length = 1370

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 191/459 (41%), Gaps = 63/459 (13%)

Query: 318  LRTFSS-KNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMC--PFNSAAFPDS-LAI 373
            LRTFS+    + VF     P  I+ + +  L  +    + S  C  PF++   P+  L  
Sbjct: 917  LRTFSNIGGYSGVFLCGPYPYWIFVTIRGALCCHPMSVDGSVSCFVPFHNVNCPNGFLYF 976

Query: 374  AKEGELTIGTIDDIQKLH----IRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE---- 425
              +GEL I  +    K      +R I L      + +  + + +A+ +  ++ C      
Sbjct: 977  NSQGELRICMLPPHMKYDTAWPMRKITLRCSVHFLAYSIEHKVYALVTSVSEPCTRLPYL 1036

Query: 426  --ESEMHF------------------VRLLDDQTFEFISTYPLDT--FEYGCSI----LS 459
              E+E  F                  V+L+   +++ +    LD   FE+   +    LS
Sbjct: 1037 TFENEREFEDLEKGDRFIYPHIDKFSVQLISPASWDLVPNARLDMGEFEHITCMKNVWLS 1096

Query: 460  CSFSDDSNVYYCV-GTAYVLPEENEPTKGRILVF-----IVEDG------KLQLIAEKET 507
            C     +   + V GT  V  EE   ++G+I++      + E G      KL+ I  +E 
Sbjct: 1097 CGQDSSARQNFLVLGTVNVFGEEMS-SRGKIIILEVIEVVPEPGQPLTKNKLKQIYSEEQ 1155

Query: 508  KGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIV 567
            KG V ++    G LL AI QKI ++++    D  + L+       ++   +  +   F +
Sbjct: 1156 KGPVTAVCGLEGNLLTAIGQKIFIWRF----DENQSLRGLAFVDTNVYIHHALSFRSFAL 1211

Query: 568  VGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRK 624
            VGD+ +SI+LL Y+ +   +   +RD     +   +++ D     +L +++  NL     
Sbjct: 1212 VGDIQRSITLLRYQTDFKTLSVTSRDVRPLEVYTADLVVDGTGINFLVSDHEKNLVLFAY 1271

Query: 625  NSEGATDEERGRLEVVGEYHLGEFVN-RFRHGSL-VMR---LPDSDVGQIPTVIFGTVNG 679
            + E        RL    + H+G   N  +R  +  V R   LP+     +   + GT++G
Sbjct: 1272 DPEDHESHGGSRLTKRADMHIGSRANCMWRVAACGVDRSTGLPNQPYAGVHITMMGTLDG 1331

Query: 680  VIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWR 718
             I  +  +  + Y  L  LQ  +   ++ + GLN + +R
Sbjct: 1332 SICHVLPVAEKVYRRLLMLQNIMITGLQHIAGLNPKAFR 1370


>gi|388581811|gb|EIM22118.1| hypothetical protein WALSEDRAFT_28358 [Wallemia sebi CBS 633.66]
          Length = 1259

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 14/280 (5%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            KL+++  +ETKGAV ++ + +G  + A+ QK+ +    + +     L S   +      +
Sbjct: 989  KLKMLMREETKGAVSAITSCSGYFVVAVGQKVLIRALEINE----RLISVAFYDAGTYIV 1044

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL--DDDI-YLGAE 614
             ++   +FI+VGD +KSI+ L ++     + + +RD           L  +D I ++  +
Sbjct: 1045 SLEVLKNFILVGDQVKSITFLAFQESPYKLVQLSRDARQIETCVSNFLAHEDQISFVSND 1104

Query: 615  NNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIF 674
               +L  +  N    T E   +L    E+H G         +  + LP   V     ++ 
Sbjct: 1105 IQGDLRLIDYNPFDPTAEGGEKLIRTTEFHKGS------EATCSLLLPKPSVRPSSELLL 1158

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AKNFL 733
            G V+G +  ++ +    +  L  LQ  L + I  +  LN    R   N+  +   +K  L
Sbjct: 1159 GCVDGSLSCLSPVDEITFKALWLLQGALVRQIPHIAALNPRAHRHVRNDYVSRSLSKGIL 1218

Query: 734  DGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
            DG L+ ++  +      EI+K +  S  EL   +   + L
Sbjct: 1219 DGLLLSAYQTIDHATQVEIAKRIGYSKAELLGYLRNFSWL 1258


>gi|327304811|ref|XP_003237097.1| hypothetical protein TERG_01819 [Trichophyton rubrum CBS 118892]
 gi|326460095|gb|EGD85548.1| hypothetical protein TERG_01819 [Trichophyton rubrum CBS 118892]
          Length = 1398

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 24/308 (7%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 1094 VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1144

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  L         ++GD  K +    Y  E   ++   ++   
Sbjct: 1145 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFTGYSEEPYKLDLFGKENEN 1204

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF---VN 650
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F   V 
Sbjct: 1205 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLRRSVFHTGHFASTVT 1264

Query: 651  RFRHGSLVMRLP--------DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
               HG+     P        DS       ++     G I VI  L  + Y  L  LQ+ L
Sbjct: 1265 LLPHGAHTTSSPVDEDAMDTDSPPPSKYQILMTFQTGSIAVITPLSEDSYRRLLALQSQL 1324

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1325 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1383

Query: 763  LCKRVEEL 770
            +   +E+L
Sbjct: 1384 IRIDLEKL 1391


>gi|255725990|ref|XP_002547921.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
 gi|240133845|gb|EER33400.1| hypothetical protein CTRG_02218 [Candida tropicalis MYA-3404]
          Length = 1053

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 147/343 (42%), Gaps = 21/343 (6%)

Query: 6   VLPKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSL 65
           + P ++I  +L+     + ++ LE    L PI+D   +D       ++VT S       L
Sbjct: 384 IKPTKVITFDLKSLTNLALIDTLE---TLSPILDAKSID------SKLVTLSSH---SYL 431

Query: 66  RIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 124
           + V +GI  +      L  I   +++ + S +   D +LV+S    ++ L +++ + +E+
Sbjct: 432 KTVTHGIPTSTMVESPLPVIPTDIFTTKLSFESENDEYLVISSSLSSKTLVLSIGEVVED 491

Query: 125 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN--EWKSPPGYSVNVATA 182
            E   F     T+       N +VQ+ +  ++ V   + E +   +W  P G ++  A  
Sbjct: 492 VEDSEFVLDQPTIAVQQVGKNSVVQIYTNGIKHVRQINGEKKKITDWLPPAGITITHAAT 551

Query: 183 NASQVLLATGGGHLVYLEI---GDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVG 239
           N  QVL+A     +VY EI    D ++   +  +L    + L I     N   S  A +G
Sbjct: 552 NNQQVLIALSNLEVVYFEIDHLDDQLIEYQERLELSSSTTALAIEEHTNNHHQSPFAIIG 611

Query: 240 MWTDISVRIFSLPDLNLITKEHLGG-EIIPRSVLLCAFEGISYLLCALGDGHLLNFLLNM 298
             +D ++++ SL   N +  + +        SV +        +   + +G      ++ 
Sbjct: 612 -CSDETIQVVSLKQQNCLEIQSIQALSSNCSSVKMIKLGKDLMVHIGMNNGVYARIKIDP 670

Query: 299 KTGELTDRKKVSLGTQPITLRTFS-SKNTTHVFAASDRPTVIY 340
             G+L+D +   LG++P+ L     +K  T V A S +  + Y
Sbjct: 671 INGKLSDSRIKYLGSKPVKLNIVKINKEITGVLAVSSKSWIGY 713


>gi|68060004|ref|XP_671977.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56488645|emb|CAI04030.1| hypothetical protein PB301494.00.0 [Plasmodium berghei]
          Length = 346

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 6/156 (3%)

Query: 27  VLERYVNLGPIVDFCVVDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQG-I 85
           ++++  +L PIVD  ++D +     Q+    G     SLRI+++G+ I E A+ EL G  
Sbjct: 185 LVDQIYSLSPIVDMKILDAKNSNIPQIYALCGRGPRSSLRILQHGLSIEELANNELPGKP 244

Query: 86  KGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYN 145
           + +W+++      +D +++VSF  E   L + + + +EE       +   T+  +    N
Sbjct: 245 RYIWTIKKDNSSEYDGYIIVSF--EGNTLILEIGETVEEVYDSLLLTNVTTIHINLLYDN 302

Query: 146 QLVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVAT 181
             +QV    +R ++    ++  EW  P    ++ AT
Sbjct: 303 SFIQVYDTGIRHING---KIVQEWVPPKNKQIDAAT 335


>gi|303285993|ref|XP_003062286.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455803|gb|EEH53105.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1469

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 44/335 (13%)

Query: 471  CVGTAYVLPE-ENEPTKGRILVFIVE----DGKLQLIAEKETKGAVYSL--NAFNGKLLA 523
             VGTA  +P  E+ P +GR+++F +     DG+ + +              +   G L+ 
Sbjct: 1139 AVGTA--MPGGEDTPCRGRVILFEISWQMVDGETRRVPLLLLFFDDALAALSGLEGHLVV 1196

Query: 524  AINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHE 583
            AI  K+ ++ W    DG  EL         +  + +    +F+ +GD+ K      +K +
Sbjct: 1197 AIGTKLIVHAW----DGA-ELIPVAFFDTPVHTVTINVVKNFVCIGDVQKGAYFFRWKDD 1251

Query: 584  EGAIEER----ARDYNANWMSAVEILDDDI---YLGAENNFNLFTVRKNSEGATDEERGR 636
                E+     A+D+ +  + + E L D      L A+   N +    + + +   +  +
Sbjct: 1252 PRTGEKNLIQLAKDFESMDVLSTEFLVDGSTLSLLAADTAGNAYVFAYDPKSSESWKGQK 1311

Query: 637  LEVVGEYHLGEFVNR---FRHGSLVMRLPDSDVGQIPT----------VIFGTVNGVIGV 683
            L     +H+G  V+R   F+  +      D      P           V FGT++G +G+
Sbjct: 1312 LLTKASFHVGSPVHRMVRFKLKTPTGAGNDGRAAPTPAEIKANANRHAVFFGTLDGSLGI 1371

Query: 684  IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEK----KTVDAKNFLDGDLIE 739
            +  +    +  LE LQ  L        GLN   +R+    +    ++    N LDG++++
Sbjct: 1372 LVPMESSTHAKLEVLQRWLNYNTAQNAGLNGRSYRAPKTTEGRAMRSPAPHNLLDGEMLQ 1431

Query: 740  SFLDLSRTRMDEISKTMNVSVEELCKRVEELTRLH 774
             F  L+ T+  E +    ++      R E LT LH
Sbjct: 1432 GFESLAWTKQAEAADAAGMT------REEALTYLH 1460



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 46/260 (17%)

Query: 18  PDAKGSYVEVLERYVNLGPIVDFCV-----VDLERQGQGQVVTCSGAYKDGSLRIVRNGI 72
           PD  G    V +  + + P++D  V     V  +   + +++   G  K+G+L +++ GI
Sbjct: 510 PDHPGYTFTVRDSVLGISPVIDLTVGASASVSGDTIERTELIAACGHGKNGALAVLQRGI 569

Query: 73  G---INEQASVELQGIKGMWS----------LRSSTD-------DPFDTFLVVSFISETR 112
               + E  S  L G+KG W+          LR S         DP+  +LV+S  S T 
Sbjct: 570 QPELVTEVESGTLPGLKGTWTVHHDSADNERLRGSAAAAAAQAVDPYHAYLVISLASSTM 629

Query: 113 ILAMNLEDELEE-TEIEGFCSQTQTLFCHDA--------IYNQLVQVTSGSVRLVSSTSR 163
           IL     +EL+E +E     +   TL   +A        +Y++ V+V +G V++    S 
Sbjct: 630 ILETG--EELKEVSEHVELVTDAATLCAGNAFGRERIVQVYDKGVRVAAGPVKVQDIAST 687

Query: 164 ELRNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI 223
           EL  +     G  +  A  +   VL            + DG L  +K  +    +  LD+
Sbjct: 688 ELVADAGDGEGIEIVAAEISFPYVL----------CRLSDGSLAVLKGDEESKTLVKLDV 737

Query: 224 NPIGENPSYSQIAAVGMWTD 243
           + +   P    IA   +  D
Sbjct: 738 DALARLPPGGGIACATLVDD 757


>gi|302308830|ref|NP_985929.2| AFR382Wp [Ashbya gossypii ATCC 10895]
 gi|442570014|sp|Q753D4.2|RSE1_ASHGO RecName: Full=Pre-mRNA-splicing factor RSE1
 gi|299790815|gb|AAS53753.2| AFR382Wp [Ashbya gossypii ATCC 10895]
          Length = 1288

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)

Query: 63  GSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRIL--AMNLE 119
           G +R+   G+   +  S  L      +W++ ++    F   L ++    T IL  A    
Sbjct: 450 GDVRLFTAGVNFMDIISSPLPAAPLDIWTV-ATNGSRFHKLLFIALQESTMILKIAAGTV 508

Query: 120 DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS-VRLVSST--SRELRNEWKSPPGYS 176
           +ELE        +Q +T+         ++QVT    V ++ +   S E + EW  P G  
Sbjct: 509 EELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLEWFPPAGIC 568

Query: 177 VNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK-HAQLEYEISCLDINPIGENPSYSQ 234
           +  A++N++Q++LA     +VY EIG    L E++   ++E  I+ L I   G    Y  
Sbjct: 569 ILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN-GNRSDYMI 627

Query: 235 IAAVGMWTDISVRIFSLP---DLNLITKEHLGGEIIPRSVLLCAFEGISYLL-CALGDGH 290
           IA+V    D +V+++SL      N +    +   + P S L  A  G S  L   L  G 
Sbjct: 628 IASV----DSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSGGSLCLHIGLDSGV 683

Query: 291 LLNFLLNMKTGELTDRKKVSLGTQPITL 318
            +   L+  TGEL D +   LGT+P+ +
Sbjct: 684 YVRSKLDRNTGELFDVRTKYLGTKPVEI 711


>gi|374109159|gb|AEY98065.1| FAFR382Wp [Ashbya gossypii FDAG1]
          Length = 1288

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)

Query: 63  GSLRIVRNGIGINEQASVELQGIK-GMWSLRSSTDDPFDTFLVVSFISETRIL--AMNLE 119
           G +R+   G+   +  S  L      +W++ ++    F   L ++    T IL  A    
Sbjct: 450 GDVRLFTAGVNFMDIISSPLPAAPLDIWTV-ATNGSRFHKLLFIALQESTMILKIAAGTV 508

Query: 120 DELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGS-VRLVSST--SRELRNEWKSPPGYS 176
           +ELE        +Q +T+         ++QVT    V ++ +   S E + EW  P G  
Sbjct: 509 EELELPHNPFVIAQDKTVLIAHMGGQSIIQVTENKMVHIIENRDESYESKLEWFPPAGIC 568

Query: 177 VNVATANASQVLLATGGGHLVYLEIGDG-ILTEVK-HAQLEYEISCLDINPIGENPSYSQ 234
           +  A++N++Q++LA     +VY EIG    L E++   ++E  I+ L I   G    Y  
Sbjct: 569 ILKASSNSTQLILALSNNEVVYFEIGSNESLNELQDRIEVEERITALAIGN-GNRSDYMI 627

Query: 235 IAAVGMWTDISVRIFSLP---DLNLITKEHLGGEIIPRSVLLCAFEGISYLL-CALGDGH 290
           IA+V    D +V+++SL      N +    +   + P S L  A  G S  L   L  G 
Sbjct: 628 IASV----DSTVKVYSLKVQDQANFLEVVSMQVLVSPASSLQLASSGGSLCLHIGLDSGV 683

Query: 291 LLNFLLNMKTGELTDRKKVSLGTQPITL 318
            +   L+  TGEL D +   LGT+P+ +
Sbjct: 684 YVRSKLDRNTGELFDVRTKYLGTKPVEI 711


>gi|325094074|gb|EGC47384.1| cleavage factor two protein 1 [Ajellomyces capsulatus H88]
          Length = 1377

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 171/434 (39%), Gaps = 92/434 (21%)

Query: 393  RSIPLGEHPRRICHQEQSRTFAICSLKNQ----SCAEESEMH-----------------F 431
            R I LGE    + +   S T+ I +  NQ    +  E+ E+H                  
Sbjct: 976  RKIGLGEQVDAVEYSSSSETYVIGT--NQKVDFNLPEDDEIHPEWRNEVISFLPQIDKGS 1033

Query: 432  VRLLDDQTFEFISTYPLDTFE----YGCSILSCS-FSDDSNVYYCVGTAYVLPEENEPTK 486
            V+LL  +T+  I +Y L   E      C  L  S  + +      VGTA +   E+   +
Sbjct: 1034 VKLLTPRTWSIIDSYNLRNAERIMCVKCLNLEVSEITHERKDTIVVGTA-LTKGEDIAAR 1092

Query: 487  GRILVFIV-----------EDGKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I +F V            + KL+LIA++E KGAV SL+   G+  L+AA  QK  +  
Sbjct: 1093 GCIYIFEVIKVVPEVDRPETNRKLKLIAKEEVKGAVTSLSGIGGQGFLIAAQGQKCIVRG 1152

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEE---R 590
              L++DG+            +L +       ++ V   +K           GAI      
Sbjct: 1153 --LKEDGS------------LLPVAFMDMQCYVNVLKELKG----------GAITNCLFS 1188

Query: 591  ARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVN 650
            AR         V   DD  +L  EN   +     +  G++  +R  L     +  G F +
Sbjct: 1189 AR-------MTVPSSDDADFLPDENRLYILVADDDYPGSSKGDR--LLHRSTFQTGHFAS 1239

Query: 651  RF----RHGSLVMRLPDSDV--------GQIPTVIFGTVNGVIGVIASLPHEQYLFLEKL 698
                  R  +   + PD+D         G +  V+  +  G I +I  +    Y  L  L
Sbjct: 1240 TMTLLPRTATSSSQGPDADPDMMDLDSSGPLHHVLVTSETGSIALITPVSETSYRRLSAL 1299

Query: 699  QTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
            Q+ L   ++   GLN   +R+   E   +  +  +DGDL++ +LDL   R  EI+  +  
Sbjct: 1300 QSQLANTLEHPCGLNPRAFRAV--ESDGIGGRGMVDGDLVKRWLDLGTQRKAEIANRVGA 1357

Query: 759  SVEELCKRVEELTR 772
             V E+   +E + +
Sbjct: 1358 DVWEIRADLEAIGK 1371


>gi|308504990|ref|XP_003114678.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
 gi|308258860|gb|EFP02813.1| hypothetical protein CRE_28194 [Caenorhabditis remanei]
          Length = 270

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 46/274 (16%)

Query: 529 IQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIE 588
            +++ W     G        G +  +  + +Q+ G  I+V D  +S+  L Y+  +  + 
Sbjct: 5   FEIFPW-----GNHLFDDRMGKNFPVSIVNIQSTGQRIIVSDSQESVHFLRYRKGDNQLV 59

Query: 589 ERARDYNANWMSAVEILDDDIYLGAENNFNLFTVR---KNSEGATDE--------ERG-- 635
             A D    ++S V +LD      A+   NL  VR   + +E   D+        +RG  
Sbjct: 60  VFADDTTPRYVSCVCVLDYHTVAVADKFGNLAVVRLPERVNEDVQDDPTVSKSVWDRGWL 119

Query: 636 -----RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIAS-LPH 689
                ++E+V  + +G+ +   +  SL   +P    G    +++ T+ G IG + S +  
Sbjct: 120 NGASQKVELVANFFIGDTITSLQKTSL---MP----GANEALVYTTIGGAIGCLVSFMSK 172

Query: 690 EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFL-------------DGD 736
           ++  F   L+ ++R     + G +H  +RS+    K     NFL             DGD
Sbjct: 173 DEVDFFTNLEMHVRSEYPPLCGRDHLAYRSYYAPCKV--CFNFLLFRSIVSLFQSVIDGD 230

Query: 737 LIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
           + E F  +  ++  E+++ +  +V E+ K++E++
Sbjct: 231 ICEQFSLMDLSKQKEVAEELGKTVSEISKKLEDI 264


>gi|302652143|ref|XP_003017931.1| hypothetical protein TRV_08063 [Trichophyton verrucosum HKI 0517]
 gi|291181517|gb|EFE37286.1| hypothetical protein TRV_08063 [Trichophyton verrucosum HKI 0517]
          Length = 429

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 132/312 (42%), Gaps = 27/312 (8%)

Query: 477 VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
           V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 125 VVPEPDQPEKSK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 175

Query: 537 RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
           ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 176 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 235

Query: 597 NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-- 651
             +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 236 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 295

Query: 652 -FRHGSLVMRLP--------DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
              HG+     P        DS       ++     G + VI  L  + Y  L  LQ+ L
Sbjct: 296 LLPHGARTPSSPVDEDAMDTDSPPPSKYQILMTFQTGSVAVITPLGEDSYRRLLALQSQL 355

Query: 703 RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
              ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 356 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 414

Query: 763 LCKRVEELTRLH 774
           +  RV +L +LH
Sbjct: 415 I--RV-DLEKLH 423


>gi|213408090|ref|XP_002174816.1| predicted protein [Schizosaccharomyces japonicus yFS275]
 gi|212002863|gb|EEB08523.1| predicted protein [Schizosaccharomyces japonicus yFS275]
          Length = 1053

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 181/451 (40%), Gaps = 46/451 (10%)

Query: 49  GQGQ-VVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFL--VV 105
           G G  ++ C+G+   GSL  + N +     +  +L G+  +W +       F + L   V
Sbjct: 355 GSGNTLLLCAGSLNSGSLIYLCNSLSAEPISLFDLSGVLHVWPVH------FQSVLKLFV 408

Query: 106 SFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSREL 165
              +ET++  M     L E E +   S  ++     A  N  VQ+T+ S+R  + TS++ 
Sbjct: 409 GMANETKVFTMV---SLYEAEFDPELSLDESTLALSACENGYVQITNKSLRYCTETSKD- 464

Query: 166 RNEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDI-N 224
                 P     +V++  A   ++      ++Y      +  E+       E+S +D  +
Sbjct: 465 ----AIPLEGITSVSSLGAYAAIVIDNTSLVIY-----NMTKEIARTTFSKEVSAVDFAS 515

Query: 225 PIGENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLC 284
           P+           VG W   ++ + ++ D + I         IPR VLL  F     L  
Sbjct: 516 PLR--------IVVGFWNK-TMEMLAIRDNSFICVLRKSLNFIPRDVLL-QFSNDDRLHL 565

Query: 285 ALG--DGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSS 342
            +G  +G+L   +  ++   +T+     LG+ PI           +V   +D+P ++Y  
Sbjct: 566 FMGSDEGNLC--VATVEKSLITNMDYRVLGSTPIHFTRLLISTGAYVICTNDKPHMVYGL 623

Query: 343 NKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPR 402
           + KL +  +N+     +  F        L  A    ++I  +D+  KL +  +     P+
Sbjct: 624 HGKLAFMPLNVPSSIDLNAFLDEKLRFCLVSAHSEGVSILHLDNQPKLSVTRLKTKLLPQ 683

Query: 403 RICHQEQSRTFAICSLKNQSCAEESEMH--FVRLLDDQTFEFISTYPLDTFEYGCSILSC 460
           +    +Q+  F+    +     E S  +      + DQ FE  S + LD FE   S+++ 
Sbjct: 684 KAAIIDQTVLFSGLKQQPNGLGELSAQYSLVCSKVYDQ-FELCS-FKLDEFEECTSVIAS 741

Query: 461 SFSDDSNVYYCVGTAYVLPEENEPTKGRILV 491
           S S      + V TA   P       GR+LV
Sbjct: 742 SSS-----LFVVTTAKKYPYNYFSVSGRLLV 767


>gi|169864473|ref|XP_001838845.1| cleavage factor protein [Coprinopsis cinerea okayama7#130]
 gi|116500065|gb|EAU82960.1| cleavage factor protein [Coprinopsis cinerea okayama7#130]
          Length = 1458

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 111/517 (21%), Positives = 207/517 (40%), Gaps = 74/517 (14%)

Query: 300  TGELTDRKKVSLGTQPITLRTFSSKNT-----THVFAASDRPTVIYSSNK---KLLYSNV 351
            +G L + KK+     P T++  +S  T     + VF   D+P  I  ++K   ++  S  
Sbjct: 940  SGILAEHKKIQRLFVPFTVKPKTSDGTPSPTYSGVFFTGDKPNWIIGTDKGGVQIYPSGH 999

Query: 352  NLKEVSHMCPF--NSAAFPDSLAIAKEGELTIGTIDDI---QKLHIRSIPLGEHPRRICH 406
            N+      C        F   L   ++G   I  + D      L  RSIP G     +  
Sbjct: 1000 NVVHSFSACSLWEERGEF---LVYTEDGPCLIEWLPDFTYSHPLPARSIPRGRGYSNVVF 1056

Query: 407  QEQSRTFAICSLKNQSCAEESEMHFVR------------LLDDQTFEFIST---YPLDTF 451
             + S    + +   Q+     +   VR            + D    E IS      +D F
Sbjct: 1057 -DPSTCLIVAASSMQARFASYDEDGVRVWEKDGPGVDDPITDTSALELISPNSWITMDGF 1115

Query: 452  EYG----------CSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF----IVEDG 497
            E+            ++ + +    S  +  VGT  +   E+   KG   +F    +V D 
Sbjct: 1116 EFATNEYINDISIVTLETAATETGSKDFIAVGTT-IDRGEDLAAKGAAYIFEIVEVVPDP 1174

Query: 498  --------KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECG 549
                    KL+L    + KG V ++  F G L++++ QKI +  +    D    L     
Sbjct: 1175 AISPTRWYKLRLRCRDDAKGPVTAVCGFQGYLVSSMGQKIFVRAF----DSDERLVGVAF 1230

Query: 550  HHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL---D 606
                I    ++   + +++GD +KS+  + ++ +   +   A+D + + ++  +     D
Sbjct: 1231 MDVGIYVTSLRVLKNLLLIGDAVKSVMFVAFQEDPYKLVLLAKDVHLHSVTRADFFFNAD 1290

Query: 607  DDIYLGAENNFNLFTVRKNSEGATDEERGR-LEVVGEYHLGEFVNRFRHGSLVMRLPDSD 665
             D+ L   +   +  + + +    D   GR L +  EYH G+      H S  +   D +
Sbjct: 1291 GDLALIVGDEEGIMRIYEYNPNDPDSRDGRYLLLRTEYH-GQVP---YHTSTTIARRDKE 1346

Query: 666  VGQIPT--VIFGTVNGVIGVIASLPHEQYLF--LEKLQTNLRKVIKGVGGLNHEQWRSFN 721
               IP   ++ G+ +G +  +  +P ++Y F  L+ LQ  L + I+ V GLN + +R   
Sbjct: 1347 DPSIPQSHLLIGSADGSLSSL--VPVDEYAFKRLQLLQGQLTRNIQHVAGLNPKAFRIVK 1404

Query: 722  NEKKTVD-AKNFLDGDLIESFLDLSRTRMDEISKTMN 757
            N+  +   +K  LDG L+  +  L   R +E++K + 
Sbjct: 1405 NDYVSKPLSKGILDGQLLAQYESLPIPRQNEMTKQIG 1441


>gi|302506529|ref|XP_003015221.1| hypothetical protein ARB_06344 [Arthroderma benhamiae CBS 112371]
 gi|291178793|gb|EFE34581.1| hypothetical protein ARB_06344 [Arthroderma benhamiae CBS 112371]
          Length = 1370

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 27/312 (8%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE ++P K +         KL+L A++E KGAV +L+   G+    + Q  +     L
Sbjct: 1036 VVPEPDQPEKNK---------KLKLFAKEEVKGAVTALSGIGGQGFLIVAQGQKCMVRGL 1086

Query: 537  RDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNA 596
            ++DG+    +      ++  L         ++GD  K +  + Y  E   ++   ++   
Sbjct: 1087 KEDGSLLPVAFKDTQCYVNVLKELKGTGMCIIGDAFKGLWFIGYSEEPYKLDLFGKENEN 1146

Query: 597  NWMSAVEILDD--DIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNR-- 651
              +   + L D   +Y L A+++ NL  ++ + E  +  +  RL     +H G F +   
Sbjct: 1147 LAVVDADFLPDGNKLYILVADDDCNLHVLQYDPEDPSSSKGDRLLHRSVFHTGHFASTMT 1206

Query: 652  -FRHGSLVMRLP--------DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNL 702
               HG      P        DS       ++     G I +I  L  + Y  L  LQ+ L
Sbjct: 1207 LLPHGGHTPSSPVDEDAMDTDSPPPSKYQILMTFQTGSIAIITPLGEDSYRRLLALQSQL 1266

Query: 703  RKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEE 762
               ++    LN   +R+  ++      +  +DG+L+  +LD+   R  EI+  +   V  
Sbjct: 1267 VNALEHPCSLNPRGYRAVESDGMG-GQRGMIDGNLLLRWLDMGAQRKAEIAGRVGADVGA 1325

Query: 763  LCKRVEELTRLH 774
            +  RV +L +LH
Sbjct: 1326 I--RV-DLEKLH 1334


>gi|343962533|dbj|BAK62854.1| cleavage and polyadenylation specificity factor 160 kDa subunit
           [Pan troglodytes]
          Length = 269

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 27/224 (12%)

Query: 426 ESEMHFVRLLDDQTFEFI--STYPLDTFEYGCSILSCSFSDDSNV-----YYCVGTAYVL 478
           + E   ++L+   ++E I  +   L  +E+   + + S   +  V     Y   GT  + 
Sbjct: 21  QQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQ 80

Query: 479 PEENEPTKGRILVF-----IVEDG------KLQLIAEKETKGAVYSLNAFNGKLLAAINQ 527
            EE    +GRIL+      + E G      K +++ EKE KG V +L   NG L++AI Q
Sbjct: 81  GEEVT-CRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQ 139

Query: 528 KIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAI 587
           KI  + W LR     EL         +    + +  +FI+  D+MKSISLL Y+ E   +
Sbjct: 140 KI--FLWSLR---ASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTL 194

Query: 588 EERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEG 628
              +RD     + +V+ + D+  LG   ++ + NL       EG
Sbjct: 195 SLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEG 238


>gi|321475208|gb|EFX86171.1| hypothetical protein DAPPUDRAFT_313209 [Daphnia pulex]
          Length = 1260

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 27/182 (14%)

Query: 477  VLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWML 536
            V+PE  +P         +   K++ +  K+ KG V ++++  G L+AAI QKI  Y W L
Sbjct: 1092 VVPEPGQP---------LTKNKIKTLYAKDQKGPVAAISSVCGYLVAAIGQKI--YLWQL 1140

Query: 537  RDD---GTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
            ++D   G   + +E   H  +L +       FI+  D+ KS+S+L ++ E   +   ARD
Sbjct: 1141 KNDDLVGIAFIDTEIYIH-QLLNI-----KSFILAADVYKSVSILRFQEEYRTLCIVARD 1194

Query: 594  YNANWMSAVEILDDDIYLG-----AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEF 648
            Y    + AV+   D+  LG     AE N  L+  +   E    +   RL    ++H+G+ 
Sbjct: 1195 YQPLEVMAVDYYIDNTQLGFLVSDAEKNLILYMYQ--PEARESQGGHRLIRKADFHVGQV 1252

Query: 649  VN 650
            V+
Sbjct: 1253 VS 1254



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 32/234 (13%)

Query: 26  EVLERYVNLGPIVDFCV-------VDLERQGQG---QVVTCSGAYKDGSLRIVRNGIGIN 75
           EV +  +N+GP     V        D +++      ++VT SG  K+G++ +++  +   
Sbjct: 446 EVCDSLLNIGPCGQMAVGEPASTCTDFDKKSPDPDVEIVTTSGYGKNGAICVLQRTMKPQ 505

Query: 76  EQASVELQGIKGMWSL---RSSTDDPFDTFLVVSFISETRILAMNLEDELEETEIEGFCS 132
              + EL  +  M+++   R++ D    T+L++S    T +L      E+ E +  GF  
Sbjct: 506 VVTTFELPEVSDMFTVFASRNNEDAIMHTYLLLSRADSTMVLQTG--QEINEMDQSGFSV 563

Query: 133 QTQTLFCHDAIYNQ-LVQVTSGSVRLVSSTSRELRNEWKSPPGYSVNVATANASQVLLAT 191
            + T+   +   N+ +VQV   SVRL+ +T+  ++ E      + +  A+A+   V + T
Sbjct: 564 TSPTILAANLGNNRFIVQVCPTSVRLLDATATVIQ-ELVMDSDFLITSASASDPYVAVLT 622

Query: 192 GGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPIGENPSYSQIAAVGMWTDIS 245
             G +       G+LT V+ +QLE     L  N        S +  V ++ DIS
Sbjct: 623 ENGRI-------GLLTFVEGSQLEMIFPVLSKN--------SPVVCVCLYRDIS 661


>gi|67624183|ref|XP_668374.1| ENSANGP00000003051 [Cryptosporidium hominis TU502]
 gi|54659590|gb|EAL38160.1| ENSANGP00000003051 [Cryptosporidium hominis]
          Length = 1493

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 543  ELQSECGHHGHILALYVQTRGD-FIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSA 601
            EL+ +  +  H + ++++   + +I+VGDLM+S+ L  +    G   E  RD +  W+  
Sbjct: 1186 ELKRKETYCTHTMIVFIKILNEEYILVGDLMRSVGLWEFDRYTGKFHEVCRDNSIAWVVE 1245

Query: 602  VEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL 661
               L  D+YL ++ N NL  + +      DE    L  +   H+GE +  F+ G      
Sbjct: 1246 GIFLSKDMYLISDENRNLRVLMRTLNPENDETYTSLSCIAHLHVGESITTFQQGKFSQAY 1305

Query: 662  PDS 664
            P++
Sbjct: 1306 PET 1308


>gi|183236777|ref|XP_001914516.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169799642|gb|EDS88708.1| hypothetical protein EHI_101530 [Entamoeba histolytica HM-1:IMSS]
          Length = 125

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 1/107 (0%)

Query: 668 QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG-VGGLNHEQWRSFNNEKKT 726
           Q   ++FG V G IG I  +P+E Y  L K+Q  +   +KG V     + W+   ++ K 
Sbjct: 17  QKKCILFGGVTGYIGGICEIPNEIYDVLIKVQNQILLQMKGIVECTTPDNWKKVIDDWKR 76

Query: 727 VDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTRL 773
           + + N +DG ++ES+L++S+ +  EI+    V+ E++   +E +  L
Sbjct: 77  MPSSNIIDGSIVESYLEMSKEKQCEIAHLSGVNEEQISDIIENMISL 123


>gi|296424589|ref|XP_002841830.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638079|emb|CAZ86021.1| unnamed protein product [Tuber melanosporum]
          Length = 595

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/442 (18%), Positives = 177/442 (40%), Gaps = 53/442 (11%)

Query: 14  LNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLERQGQG-------QVVTCSGAYKDGSLR 66
           L + P    +  ++ E   N  P+ DF +V+L  QG         +++ C+G    G++ 
Sbjct: 110 LKIGPHPAETEPKLEESVANWSPVFDFELVNLPAQGHASGKVERDRILACTGRGDHGAIT 169

Query: 67  IVRNGIGINEQASV--ELQGIKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLEDELEE 124
            +R GI    Q S   +++G++ +W L   +D  +  FL  S   ++ +  +  + E E+
Sbjct: 170 ELRYGIQARIQGSADHQMRGVRRLWVLPDCSDVGY--FLFSSLPDQSNLCFLKPDGEWED 227

Query: 125 TEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELRN--------EWKSPPGYS 176
                     +T     A+    VQVT  ++ +       L N        E    P  S
Sbjct: 228 ASDLELLDMNETTLAAGAVGKHSVQVTPSTINIAQLKHASLANHREVSRDVEMADEPQLS 287

Query: 177 VNVATANASQVLLATG-GGHLVYLEIGDGILTEVKHAQLEYEISCLD-INPIG------E 228
           +         V++A    G+ + +   +G L ++  A +  + +  D +NPIG      E
Sbjct: 288 ILRCRCGGGDVIVAAALKGNYIVVATRNGFLVKLTLATIVVDENIEDFLNPIGIPTSLAE 347

Query: 229 NPSYSQI--------AAVG--------MWTDISVRIFSLPDLNLITKEHLGGE--IIPRS 270
            P++  +        AAVG           D S  +  L + ++++    G +   I   
Sbjct: 348 EPTFISVLEINGRILAAVGTRQATIQLFLFDFSNGLVPLLEKSMMSDSCQGEQDLFICEC 407

Query: 271 VLLCAFEGISYLLCALGDGHLLNFLLNMKTGELTDR-KKVSLGTQPITLRTFSSKNTTHV 329
            ++    G + LLC L  G ++   +  + G   +R   +  G  P+ +     ++ +  
Sbjct: 408 AVIIRANGTARLLCGLRGGTVVVMDIQWQRGLSLERIDGIKFGPTPVQIYPDVGRSDSAF 467

Query: 330 FAAS------DRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIA-KEGELTIG 382
             A       D P+  + +++ +   +     +      +++  P+++ +   + ++   
Sbjct: 468 ILAGPELFRFDLPSGNFRASQVVFEESEVEPSLVAFVQIDTSPDPENIVVGVTKDQIFFA 527

Query: 383 TIDDIQKLHIRSIPLGEHPRRI 404
            + + +K+ +R + L E PRR+
Sbjct: 528 DVGESEKVCVRRLRLYETPRRL 549


>gi|385305455|gb|EIF49426.1| nuclear mrna splicing [Dekkera bruxellensis AWRI1499]
          Length = 570

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 8   PKQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFC------VVDLERQGQGQVVTCSGAYK 61
           P+Q + LNL        V ++E   NL P++D        V DL       +++  G+  
Sbjct: 47  PRQFVNLNL--------VYIVE---NLNPVIDCTIHSSDNVTDLPV-----IISLCGSQS 90

Query: 62  DGSLRIVRNGIGINEQASVELQG-IKGMWSLRSSTDDPFDTFLVVSFISETRILAMNLED 120
             SL+I+ + I   E  S EL   ++ +++  +  DD  D  + +SF  ET +L +   +
Sbjct: 91  RSSLKILNHEIPYTEIVSQELPSKVEAVFAFATHADDXNDKLIALSFYDETLLLKIG--E 148

Query: 121 ELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLV--SSTSRELRN-EWKSPPGYSV 177
           E+EE E  GF +   TL         +VQV +   R +      + +   +WK+P G  V
Sbjct: 149 EVEEAENTGFKTDVATLAXAQLGNGSVVQVYADGXRQIFYDDDDKPVDTVDWKAPVGIEV 208

Query: 178 NVATANASQVLLATGGGHLVYLEIGD 203
                + +QV+LA     + Y E+ +
Sbjct: 209 LHGAVSETQVVLALSSREIAYFEVDE 234


>gi|449299306|gb|EMC95320.1| hypothetical protein BAUCODRAFT_25380 [Baudoinia compniacensis UAMH
            10762]
          Length = 1437

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 92/432 (21%), Positives = 168/432 (38%), Gaps = 83/432 (19%)

Query: 392  IRSIPLGEHP---RRICHQEQSRTFAICSLKN----------------QSCAEESEMHFV 432
            +R++ LGE P   R++ + EQ   + + + ++                 +   +   + +
Sbjct: 934  VRTLTLGEPPQEVRQVAYHEQRGIYVVATCRDVDFTLHDLDERQRDDEPNLKPQVPQYTL 993

Query: 433  RLLDDQTFEFISTYPLDTFEYGCS--ILSCSFSD---DSNVYYCVGTAYVLPEENEPTKG 487
             LL   + + I +  +   E   S  I+    S+   +  +   VG A     E+ P KG
Sbjct: 994  HLLSATSHKVIQSLEMPYAEIVTSLKIMPLEVSEHTHEQKLMLVVGAA-AQRGEDAPAKG 1052

Query: 488  RILVFIV----------EDG-KLQLIAEKETKGAVYSLNAFNGKLLA-AINQKIQLYKWM 535
             + VF +          E G +L + A +ETKGA+ +L +F+G L+  A  QKI +    
Sbjct: 1053 LLTVFDIIDVVPEPDDPESGIRLHIAAREETKGAITALESFSGGLVGTAQGQKIMVRG-- 1110

Query: 536  LRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYN 595
            L++DGT    +      ++++L    R    + GD  K +    +  E   +    +   
Sbjct: 1111 LKEDGTCLPVAFLDAQTYMVSLKTMGRSGLSLAGDAWKGLWFGGWTEEPYRLTLLGKSRT 1170

Query: 596  ANWMSAVEIL--DDDIY-LGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRF 652
               + + E L  D  +Y L  +   +L  ++ + E        RL     +HLG      
Sbjct: 1171 KMEVVSAEFLPFDGQLYLLVVDGKMDLHVLQYDPENPKTVSGQRLLHKSTFHLG------ 1224

Query: 653  RHGSLVMRLPDSDVG----QIPT----------------------------VIFGTVNGV 680
             H  + M L  SD+     Q P                             V+    +G 
Sbjct: 1225 -HWPVDMLLLPSDLAPFAQQAPLTNGDSNGHTNGTESSAANAPAPAPSLFHVLTTFQSGA 1283

Query: 681  IGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIES 740
            +G+I  +    Y  L  LQT L  V++   GLN   +R+  +E  ++  +  +DG L++ 
Sbjct: 1284 VGLITPVDEATYRRLGALQTQLTSVLEHAAGLNPRAYRAVESE--SLGGRGVVDGMLVQR 1341

Query: 741  FLDLSRTRMDEI 752
              +L   R  E+
Sbjct: 1342 IGELGAARRAEV 1353


>gi|12697776|dbj|BAB21613.1| polyadenylation specificity factor [Homo sapiens]
          Length = 216

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)

Query: 572 MKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLG---AENNFNLFTVRKNSEG 628
           MKSISLL Y+ E   +   +RD     + +V+ + D+  LG   ++ + NL       E 
Sbjct: 1   MKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEA 60

Query: 629 ATDEERGRLEVVGEYHLGEFVNRFRH----GSLVMRLPDSDVGQIPTVI-FGTVNGVIGV 683
                  RL    ++H+G  VN F      G+       S V +   +  F T++G IG+
Sbjct: 61  KESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGGIGL 120

Query: 684 IASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD--AKNFLDGDLIESF 741
           +  +  + Y  L  LQ  L  ++    GLN   +R  + +++T+    +N LDG+L+  +
Sbjct: 121 LLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRY 180

Query: 742 LDLSRTRMDEISKTMNVS 759
           L LS     E++K +  +
Sbjct: 181 LYLSTMERSELAKKIGTT 198


>gi|213407244|ref|XP_002174393.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
 gi|212002440|gb|EEB08100.1| cleavage factor one Cft1 [Schizosaccharomyces japonicus yFS275]
          Length = 1431

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 38/294 (12%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            KL+L+  +E KG V  ++  NG LL+   QK+ +          R L+ E     H++ +
Sbjct: 1148 KLKLVTREEIKGTVAVVSEINGYLLSGQGQKVIV----------RALEDE----DHLVGV 1193

Query: 558  YVQTRGDFIVV----------GDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL-- 605
                 G + VV          GD+ +SIS + +  E   +   A+  +   +S+ + L  
Sbjct: 1194 AFIDLGSYTVVAKSLRNLLIFGDIRQSISFVGFAEEPYRMTLFAKGQDPLSVSSADFLVQ 1253

Query: 606  DDDIYLG-AENNFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLP-- 662
               +Y   A+   NL  +  + E        RL   G+ H+G  +       LV ++   
Sbjct: 1254 GQSLYFAVADMRGNLRILAYDPENPESHSGERLVTRGDIHVGHIITAIH---LVPKMKKD 1310

Query: 663  -----DSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQW 717
                 D D G     I    +G +  +  +    Y  L  +Q  L   I+ VGGLN   +
Sbjct: 1311 RPGEVDYDEGDEFACITTNSDGSLQALCPISERVYRRLNIIQNYLANRIETVGGLNPRSY 1370

Query: 718  RSFNNEKKTVDAKN-FLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
            R  N      +A +  LDG LIE F  +S     E++    V +  +   + EL
Sbjct: 1371 RLINTVSSLNNATHRILDGGLIEHFSYMSVAHRQEMAYKCGVPISTIMNDLVEL 1424



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 25/156 (16%)

Query: 25  VEVLERYVNLGPIVDFCV--------VDLERQGQGQVVTCSGAYKDGSLRIVRNGIGINE 76
           +EV +   N+GPI++FC            +  G  +V   +G  K GSL + R  I    
Sbjct: 491 LEVHDVLSNVGPIIEFCTGKAGSLAYFPQDNHGPLEVTCVTGTGKSGSLVVFRRSISPVV 550

Query: 77  QASVELQGIKGMWSLRSS--------------TDDPFDTFLVVSFISETRILAMNLEDEL 122
           +     +G + +W++  +               DD +DT+LVVS   E+ +      +  
Sbjct: 551 EGKFNFEGCQSLWTIHVTGRLKNPRSHGSERYLDDEYDTYLVVSKEKESFVFTAG--ETF 608

Query: 123 EETEIEGFCSQTQTLFCHDAIYN-QLVQVTSGSVRL 157
           +E E   F ++  T+     +   ++VQ+ + S+R+
Sbjct: 609 DEVEDSDFNTKGSTINVGGLLGGMRIVQICTTSLRV 644


>gi|356467155|gb|AET09709.1| splicing factor 3B subunit 3 [Trichinella pseudospiralis]
          Length = 129

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)

Query: 638 EVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLP-HEQYLFLE 696
           E +  Y++GE V   +   L+        G   ++++ T++G+IG +      E Y F +
Sbjct: 2   ETIATYYVGECVTCLQKAMLI-------PGSSESLVYSTMSGMIGALVPFSSKEDYEFFQ 54

Query: 697 KLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            L+ +LR     + G +H  +RSF    K V     +DGDL E +  L   +  EIS  +
Sbjct: 55  HLEMHLRTEYPPLCGRDHLAYRSFYAPVKGV-----IDGDLCEQYCLLEYAKQKEISNEL 109

Query: 757 NVSVEELCKRVEEL 770
           +    E+ K++E++
Sbjct: 110 DRVPSEIMKKLEDI 123


>gi|452825139|gb|EME32137.1| cleavage and polyadenylation specificity factor subunit-like protein
            [Galdieria sulphuraria]
          Length = 1454

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 42/276 (15%)

Query: 472  VGTAYVLPEENEPTKGRILVFIV--------EDG-----KLQLIAEKETKGAVYSLNAFN 518
            +GT ++   E+  T+GR+++F V        E G     +L LIAEKE K  V S+    
Sbjct: 1125 IGTGFI-KGEDAGTRGRLMLFEVARQEAYTEESGAFSAIQLMLIAEKELKSVVSSIARLE 1183

Query: 519  GKLLAAINQKIQLYKWMLRDDGTRELQSECGHHG-HILALYVQTRGDFIVVGDLMKSISL 577
            G +  A+  K+++YK +       EL     + G  + +  + T   ++ VGD+ K    
Sbjct: 1184 GYICCAVGPKVEIYKLV----NESELVCCSFYSGFQLFSTSINTVKQYVFVGDMYKGGYF 1239

Query: 578  LIYKHEEGAIEERARDYNANWMSAVE--ILDDDIYLGAENNFNLFTVRKNSEGATDEERG 635
            L ++    ++    +D++     + E  IL++ I     +NF    + + +     E RG
Sbjct: 1240 LFWRDRNKSLNFLGKDFDPVQTLSTEFLILNEFILFVVSDNFGNLHLLEYAGPHEIESRG 1299

Query: 636  --RLEVVGEYHLGEFVNRFRHGSLVMRLPD------SDVGQIPTVIFGTVNGVIGVIASL 687
              +L   G  HLG      R  S++    D       D      V+ GT +G +  +  L
Sbjct: 1300 GEKLLRRGVLHLGT-----RSSSMIRLRTDWKENNSEDRAGSHIVVLGTWDGGLACLLPL 1354

Query: 688  PHEQYLFLEKLQTNLRKVIKG-----VGGLNHEQWR 718
              E+Y   E+    L+KV        V GLN +++R
Sbjct: 1355 QQEEY---EQKNELLKKVYLHSYSLYVAGLNPQEFR 1387


>gi|402219312|gb|EJT99386.1| hypothetical protein DACRYDRAFT_17537 [Dacryopinax sp. DJM-731 SS1]
          Length = 1620

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 36/288 (12%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            +L+L+   E K  V ++   NG L+++  Q  +++      D    L         +   
Sbjct: 1350 RLKLLCRDEAKAPVNAICGLNGYLVSS--QGFKVFVRAFEQD--ERLVGVAFMDAGVCVT 1405

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD-----IYLG 612
             +    + +++GD  +S+S +       A +E        +++    L D+     +   
Sbjct: 1406 SLTRLKNLLLIGDAKRSVSFV-------AFQEDPFKLRPTYVTDAAFLFDEGDFSILAAD 1458

Query: 613  AENNFNLFTVRKNSEGAT--------DEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDS 664
             E    LF    N  GAT         E  G+ E     H+     R R     M++P++
Sbjct: 1459 DEGTLRLFEFDPNLTGATHGNPLICETEFNGQSE---HTHILAIAGRGREDPEEMQIPEA 1515

Query: 665  DVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNE- 723
             +      IFGT++G +G I+ +P E +  L+ L   L + ++   GLN   +R+  N+ 
Sbjct: 1516 QL------IFGTIDGTLGTISPVPDECFKRLQLLSGQLMRSVQHFAGLNPRAFRTVRNDL 1569

Query: 724  -KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEEL 770
              + ++ K  LD DL+ +F +L   R   I+K +      + + +  L
Sbjct: 1570 LSRPLN-KGMLDYDLLHAFRELDIRRQATITKQIGTDTITILRDIRSL 1616


>gi|219109892|ref|XP_002176699.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411234|gb|EEC51162.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1678

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 125/312 (40%), Gaps = 48/312 (15%)

Query: 498  KLQLIAEKET-KGAVYSLNAFNG----KLLAAINQKIQLYKWMLRDDGTRELQSECGHHG 552
            +L    EKE   GAV SL   +     +LL      I + +W     G  +L        
Sbjct: 1369 ELSFCYEKEIFHGAVTSLVCLSSEGKNRLLIGAGADINVEQW-----GNAKLTQVGFFRA 1423

Query: 553  HILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDD---I 609
             +  L+      F+++ D   S+  LI++  + ++   A+DY+   + A  ++       
Sbjct: 1424 TMQVLHTIPFKSFLLLSDAYDSLYFLIWRESDKSLTLLAKDYDPIPVYAAGVMSRGPAMT 1483

Query: 610  YLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG----EFVNRFRHGSLV------- 658
            +L  ++  NL   +     A      RL    +YHLG     F + F   SL+       
Sbjct: 1484 FLCHDDRQNLQFFQYAPGEAAARGGNRLVCRADYHLGTQTTSFASHFCRSSLMIHSATPT 1543

Query: 659  -----MRLPDSDVG-----QIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKG 708
                 ++  DS  G     Q     FGT +G +G +  L    Y  L  LQ+ +   ++ 
Sbjct: 1544 STLAALKQQDSYFGRSEEDQRLGAYFGTADGGMGAVVPLSEPVYWRLTALQSIVANALES 1603

Query: 709  VGGLNHEQWRSF----------NNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISKTMNV 758
               L    WR +          +N++K    K  +DGDL+  + DLS ++ ++I+  +  
Sbjct: 1604 DCALAPRAWRLYRRSTRRGGCRSNDRK----KGVIDGDLVLQYADLSISKQEDIASAIGS 1659

Query: 759  SVEELCKRVEEL 770
            +V+ +   + EL
Sbjct: 1660 TVDLILDNLLEL 1671


>gi|260819268|ref|XP_002604959.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
 gi|229290288|gb|EEN60969.1| hypothetical protein BRAFLDRAFT_92599 [Branchiostoma floridae]
          Length = 163

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 71/136 (52%), Gaps = 13/136 (9%)

Query: 636 RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASL-PHEQYLF 694
           + +V+  YH+GE V   +  +L+        G   ++++ T++G +G++     HE + F
Sbjct: 34  KADVICNYHVGEVVTSVQKATLIP-------GGSESLVYTTISGGVGILVPFTSHEDHDF 86

Query: 695 LEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRMDEISK 754
            + L+ ++R     + G +H  +RS+         KN +DGDL E F  +  ++   +++
Sbjct: 87  FQHLEMHIRSEHPPLCGRDHLSFRSY-----YYPVKNVIDGDLCEQFNSMEPSKQKSVAE 141

Query: 755 TMNVSVEELCKRVEEL 770
            ++ +  E+ K++E++
Sbjct: 142 ELDRTPAEVSKKLEDI 157


>gi|336388105|gb|EGO29249.1| hypothetical protein SERLADRAFT_445076 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1424

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            KL+L+A  + KG V +L   NG L++++ QKI +  +    D    L         +   
Sbjct: 1150 KLKLLARDDAKGPVTALCGINGYLVSSMGQKIFIRAF----DMDERLVGVAFLDVGVYVT 1205

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL--DDDIYLGAEN 615
             ++   +F+++GD +KSI  + ++ +   +   A+D +   ++  +    DD + +  E+
Sbjct: 1206 SLRVVKNFLLIGDAVKSIWFVAFQEDPYKLVVLAKDVHRTHVTNADFFFTDDTLSIVTED 1265

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHL---GEFVNRFR-HGSLVM--RLPDSDVGQI 669
               +  +        + + G+       HL    EF N      SLV+  R  +  V   
Sbjct: 1266 GDGILRMYAYDPDDPESKNGQ-------HLLCRTEFHNHSECRSSLVIARRTKEESVLPQ 1318

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
              ++    +G +  +  +    +  L+ LQ  L + I+ V GLN   +R   N+  +   
Sbjct: 1319 AKILSAFSDGSLSSLTPVDDASFKRLQLLQGQLTRNIQHVAGLNPRAYRIVRNDFVSKPL 1378

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTM 756
            +K+ LDG L+ +F  L  +R +E++K +
Sbjct: 1379 SKDILDGQLLSAFESLPISRQNEMTKQI 1406


>gi|336375160|gb|EGO03496.1| hypothetical protein SERLA73DRAFT_165174 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1428

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            KL+L+A  + KG V +L   NG L++++ QKI +  +    D    L         +   
Sbjct: 1154 KLKLLARDDAKGPVTALCGINGYLVSSMGQKIFIRAF----DMDERLVGVAFLDVGVYVT 1209

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL--DDDIYLGAEN 615
             ++   +F+++GD +KSI  + ++ +   +   A+D +   ++  +    DD + +  E+
Sbjct: 1210 SLRVVKNFLLIGDAVKSIWFVAFQEDPYKLVVLAKDVHRTHVTNADFFFTDDTLSIVTED 1269

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHL---GEFVNRFR-HGSLVM--RLPDSDVGQI 669
               +  +        + + G+       HL    EF N      SLV+  R  +  V   
Sbjct: 1270 GDGILRMYAYDPDDPESKNGQ-------HLLCRTEFHNHSECRSSLVIARRTKEESVLPQ 1322

Query: 670  PTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD- 728
              ++    +G +  +  +    +  L+ LQ  L + I+ V GLN   +R   N+  +   
Sbjct: 1323 AKILSAFSDGSLSSLTPVDDASFKRLQLLQGQLTRNIQHVAGLNPRAYRIVRNDFVSKPL 1382

Query: 729  AKNFLDGDLIESFLDLSRTRMDEISKTM 756
            +K+ LDG L+ +F  L  +R +E++K +
Sbjct: 1383 SKDILDGQLLSAFESLPISRQNEMTKQI 1410


>gi|258575565|ref|XP_002541964.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237902230|gb|EEP76631.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1376

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 153/381 (40%), Gaps = 70/381 (18%)

Query: 432  VRLLDDQTFEFISTYPLDTFEYGCSILSCSF-----SDDSNVYYCVGTAYVLPEENEPTK 486
            V+LL  +T+  I  Y L   E    + + +      + +      VGTA V  E+  P +
Sbjct: 1017 VKLLSPRTWSIIDCYDLGATERILCLKTINMEVSEITHERQDMVVVGTAIVRGEDITP-R 1075

Query: 487  GRILVFIVED-----------GKLQLIAEKETKGAVYSLNAFNGK--LLAAINQKIQLYK 533
            G I VF + D            K +L A+++ KGAV +++   G+  L+AA  QK  +  
Sbjct: 1076 GSIYVFEIIDVAPDPDRPETNQKFKLFAKEDVKGAVTAISGIGGQGFLIAAQGQKCLVRG 1135

Query: 534  WMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARD 593
              L++DG+    +      ++  L         ++GD +K +                  
Sbjct: 1136 --LKEDGSLLPVAFMDMQCYVSVLKELQGTGLCIMGDALKGLWFT--------------G 1179

Query: 594  YNANWMSAVEILDDDIYLGAENNFNLFTVRKNSE------------GATDEERGRLEVVG 641
            Y+    SAV++         E  + L    K+SE              +  +  RL    
Sbjct: 1180 YSVQLSSAVDVET------CEEPYKLTLFGKDSEYLQVVAADFLPDDPSSSKGDRLLHRS 1233

Query: 642  EYHLGEFVNRFRHGSLVMRLPDS---------DVGQIPT---VIFGTVNGVIGVIASLPH 689
             +H G F++     +L+ +   S         DV  +P    V+  + +G +GVI  L  
Sbjct: 1234 SFHTGHFISTL---TLIPQYTSSGTGASEDNMDVDYMPAGYQVVVTSQSGSVGVITPLTE 1290

Query: 690  EQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRTRM 749
            E Y  L  LQ+ L   ++   GLN + +R+   E      +  +DG+L+  +LD+   R 
Sbjct: 1291 ETYRRLSALQSQLVMSMEHPCGLNPKAYRAV--ESDGFSGRGLVDGNLLLRWLDMGVQRK 1348

Query: 750  DEISKTMNVSVEELCKRVEEL 770
             EI+  +   ++ +   +E +
Sbjct: 1349 AEIAGRVGADLQSIRADLERI 1369


>gi|409046890|gb|EKM56369.1| hypothetical protein PHACADRAFT_93103 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1417

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 108/502 (21%), Positives = 195/502 (38%), Gaps = 68/502 (13%)

Query: 306  RKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNK---KLLYSNVNLKEVSHMCPF 362
            R+ +   T P   R FS      VF   DRP  I S++K   K++ S   +      C  
Sbjct: 915  RQLIPFVTSPTPGRAFSG-----VFLTGDRPCWILSTDKGGVKIMPSGHQVVHAFTACSL 969

Query: 363  NSAAFPDSLAIAKEGELTIGTIDDIQ---KLHIRSIPLGEHPRRICHQ--EQSRTFAICS 417
              +   D L  + EG   I  + +IQ    L  RSIP    PR   H   E + T  + +
Sbjct: 970  WESKG-DFLLYSDEGPSLIEWVPEIQFEGHLPSRSIP---RPRPYSHVVFEPTTTLLVAA 1025

Query: 418  LKNQSC-------------AEESEMHFVRLLDDQTFEFIST---YPLDTFEYG------- 454
               QS               +E  M    + +    E IS      +D +E+        
Sbjct: 1026 SSLQSTFTSYDEDRNVVWEPDEPNMSL-PVCETSALELISPDTWTTMDGYEFAQNEFVTC 1084

Query: 455  --CSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF----IVEDG--------KLQ 500
              C  L    ++     +   +  +   E+   KG + +F    +V D         +L+
Sbjct: 1085 MECITLETLSTETGTKDFVAVSTTINRGEDLAVKGAVYIFEVVEVVPDPAMGQKRWYRLK 1144

Query: 501  LIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQ 560
            L    E KG V +L   +  L++++ QKI    ++   D    L         +    ++
Sbjct: 1145 LHCRDEAKGPVTALCGMDNYLVSSMGQKI----FVRALDLDERLVGVAFLDVSVYVTSLR 1200

Query: 561  TRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL--DDDIYLGAENNFN 618
               + +V+GD +K + L+ ++ +   +   A+DY    ++  ++   D    L + +   
Sbjct: 1201 AVKNLLVIGDALKGVWLVAFQEDPYKLVVLAKDYYPIPVACADLFFADGKASLISCDEEG 1260

Query: 619  LFTVRKNSEGATDEERG-RLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP--TVIFG 675
            +  + +      +   G RL    E+H G+    +R   L+ R       +IP   +I G
Sbjct: 1261 VLRLSEYDPHDPESRHGQRLLCRTEFH-GQ--TEYRTSHLIARRGKGLDAEIPQAKLICG 1317

Query: 676  TVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AKNFLD 734
              +G +  +  +       L  LQ  L + ++ V GLN + +R   N++      K  LD
Sbjct: 1318 HTDGSLTSLTYVDDAVSKRLHLLQGQLARNVQHVAGLNPKAFRVVRNDRVARPLTKGILD 1377

Query: 735  GDLIESFLDLSRTRMDEISKTM 756
            G+L+ +F DL   R  E+++ +
Sbjct: 1378 GNLLAAFEDLPVPRQVEVTRQI 1399


>gi|390599704|gb|EIN09100.1| hypothetical protein PUNSTDRAFT_67240 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1439

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/264 (20%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 498  KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHILAL 557
            KL+L    + KG V +L A +G L++++ QKI +  +    D    L         +   
Sbjct: 1163 KLRLRCRDDAKGPVTALCAMDGYLVSSMGQKIFVRAF----DMDERLVGVAFLDVGVYVT 1218

Query: 558  YVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEIL--DDDIYLGAEN 615
             ++   + +V+GD  KS+  + ++ +   +   A+D+    ++  + +  +D + +   +
Sbjct: 1219 TLRAVKNLLVIGDAAKSVWFVGFQEDPYKLVILAKDFQTVCVTTADFIFTEDSMSILTND 1278

Query: 616  NFNLFTVRKNSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRLPDSDVGQIP--TVI 673
               +  + +      D   G+ +++                   R+ + +   +P   V+
Sbjct: 1279 ENGVMRLYQYDPQDPDSRNGQ-QLMCRTEFDTHTTCQTSIVFARRVGEGEEAALPQAKVV 1337

Query: 674  FGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKTVD-AKNF 732
             G+++G +  +  +    +  L+ LQ  L + I+ V GLN + +R   N+  +   +K  
Sbjct: 1338 AGSIDGSLAALTCMDEPAFKRLQLLQGQLTRNIQHVAGLNPKAFRIVRNDYVSKPLSKGI 1397

Query: 733  LDGDLIESFLDLSRTRMDEISKTM 756
            LDG+L+ S+L+L   R +EI+K +
Sbjct: 1398 LDGNLLSSYLELPIPRQEEITKQI 1421


>gi|325187036|emb|CCA21579.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 1912

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 56/349 (16%)

Query: 469  YYCVGTAYVLPE-ENEPTKGRILVFIVE-------DG-------KLQLIAEKET-KGAVY 512
            Y  +GT YV P  E+   KGR+L++ V+       DG       KL+L   KE  +GA+ 
Sbjct: 1569 YIVIGTGYVGPNGEDASGKGRLLLYEVDYAQYVDKDGTTSSKLPKLRLTFIKEHHQGAIT 1628

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE----CGHHG---HILALYVQTRGDF 565
            S+      +LA++  K+ +Y          E +S+    C  +     I +L V  R ++
Sbjct: 1629 SVIQLGMYVLASVGSKMIVY----------EFKSDQLIGCAFYDAQMFITSLSV-LRKEY 1677

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE--ILDDDIYL-GAENNFNLFTV 622
            ++  D+ KS+S L ++ ++  +   A+DY    ++  E  ILD  + L  A+   NL  +
Sbjct: 1678 VMYSDVYKSVSFLRWRQKDRQLILLAKDYEPLAVTTAEFNILDTRLALIAADVEENLHVL 1737

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRF------RHGSLVMRLPDSD--VGQIPTVIF 674
            +            RL    ++H+G  ++         + S    +P     +G +   + 
Sbjct: 1738 QYAPHDIESRGGQRLLRTSDFHVGVQISSILRKLVISNASHQQYIPAKGRCIGNMYLNVL 1797

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT----VDA- 729
            G+  G I  +  +P   +  L  LQ  +   +     LN  ++R      +      DA 
Sbjct: 1798 GSSEGGIAALIPVPERVFRRLFTLQNVMISALPQNCALNPREFRVMKANGRVRSGRADAW 1857

Query: 730  ------KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
                  K FLDG ++  FL L      E+++ +  + E + + + EL R
Sbjct: 1858 CKQKWKKGFLDGQVLCRFLHLDYVAQKELARCIGTNPEVIIQNLSELQR 1906



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 12/121 (9%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS-STDDP-------FDTFL 103
           ++V   G+ KDGS+ ++ +G+      + EL G + MW++   S+D P       +D++L
Sbjct: 753 ELVVSGGSSKDGSISVIHHGLRPIVSTAAELSGCRAMWTVVGMSSDVPESQVTRRYDSYL 812

Query: 104 VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ--LVQVTSGSVRLVSST 161
           ++S    T IL    E E  E +  GF +   TL C   +++Q  +VQV    VR++   
Sbjct: 813 ILSVAQRTMILRTGEEMEPLEDD-SGFYTCGPTL-CATNLFSQRRIVQVFKQGVRVMQQA 870

Query: 162 S 162
           S
Sbjct: 871 S 871


>gi|389740693|gb|EIM81883.1| hypothetical protein STEHIDRAFT_65512 [Stereum hirsutum FP-91666 SS1]
          Length = 1438

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 107/517 (20%), Positives = 196/517 (37%), Gaps = 87/517 (16%)

Query: 303  LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPF 362
            L + KK+     P        K  T VF   DRP  I  ++K  +  + +   V H   F
Sbjct: 928  LAELKKIQRLFIPFVTSPAPEKTFTGVFFTGDRPCWILGTDKGGIRVHSSGHAVVHS--F 985

Query: 363  NSAAFPDS----LAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAI--- 415
               +  DS    L    EG   +  + D+Q LH       E P R   + ++ T  +   
Sbjct: 986  TPCSLWDSKGDFLLYTDEGPCLLEWMPDVQ-LHT------ELPSRFMPRSRAYTNVVFDP 1038

Query: 416  --------CSLK----------NQSCAEESEMHFVRLLDDQTFEFIST---YPLDTFEYG 454
                     SLK          NQ+   ++        D  T E I+      +D +E+ 
Sbjct: 1039 FTCLIVGAASLKAQFTSFDEDGNQTWEPDAPNISYPTTDCSTLELITPDAWLTMDGYEFA 1098

Query: 455  ---------CSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVF----IVEDG---- 497
                     C +L    +D     +      +   E+   KG   +F    +V D     
Sbjct: 1099 SNEIVNAVECVMLETQSTDSGQKSFIAVGTTINRGEDLAVKGATYIFEIVEVVPDPSFGV 1158

Query: 498  ----KLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGH 553
                KL++    + KG V +L   +G L++++ QKI +    L +        + G    
Sbjct: 1159 KRWFKLRMRCRDDAKGPVTALCGMDGYLVSSMGQKIFVRALDLDERLVGVAFLDVG---- 1214

Query: 554  ILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDIYLGA 613
            +    ++   + +++ D +KS+  + ++ +   +   A+D      ++ +      +  A
Sbjct: 1215 VYVTSLRALKNLLIISDAVKSVWFVAFQEDPYKLTVLAKDAQQVCFTSAD------FFFA 1268

Query: 614  ENNFNLFTVRK---------NSEGATDEERGRLEVVGEYHLGEFVNRFRHGSLVMRL--- 661
                ++ T  +         N      +   RL    E+H G+    +R    + R    
Sbjct: 1269 NQQLSIVTCDEEGILRMYHYNPHDPESKNGQRLLCHAEFH-GQI--EYRSSLTIARRTKG 1325

Query: 662  PDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFN 721
            PD+++ Q   +I G+ +G +  +  +    +  L  LQ  L + ++    LN   +R+  
Sbjct: 1326 PDTEIPQA-KLICGSPDGSLSALVPVEEAAFKRLHLLQGQLTRNVQHTAALNPRAFRAVR 1384

Query: 722  NE--KKTVDAKNFLDGDLIESFLDLSRTRMDEISKTM 756
            NE   KT+  K FLDG L+ SF DL  +R  EI++ +
Sbjct: 1385 NEYVSKTLH-KGFLDGLLLRSFEDLPVSRQIEITRQI 1420


>gi|325189779|emb|CCA24259.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 1911

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 56/349 (16%)

Query: 469  YYCVGTAYVLPE-ENEPTKGRILVFIVE-------DG-------KLQLIAEKET-KGAVY 512
            Y  +GT YV P  E+   KGR+L++ V+       DG       KL+L   KE  +GA+ 
Sbjct: 1568 YIVIGTGYVGPNGEDASGKGRLLLYEVDYAQYVDKDGTTSSKLPKLRLTFIKEHHQGAIT 1627

Query: 513  SLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSE----CGHHG---HILALYVQTRGDF 565
            S+      +LA++  K+ +Y          E +S+    C  +     I +L V  R ++
Sbjct: 1628 SVIQLGMYVLASVGSKMIVY----------EFKSDQLIGCAFYDAQMFITSLSV-LRKEY 1676

Query: 566  IVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVE--ILDDDIYL-GAENNFNLFTV 622
            ++  D+ KS+S L ++ ++  +   A+DY    ++  E  ILD  + L  A+   NL  +
Sbjct: 1677 VMYSDVYKSVSFLRWRQKDRQLILLAKDYEPLAVTTAEFNILDTRLALIAADVEENLHVL 1736

Query: 623  RKNSEGATDEERGRLEVVGEYHLGEFVNRF------RHGSLVMRLPDSD--VGQIPTVIF 674
            +            RL    ++H+G  ++         + S    +P     +G +   + 
Sbjct: 1737 QYAPHDIESRGGQRLLRTSDFHVGVQISSILRKLVISNASHQQYIPAKGRCIGNMYLNVL 1796

Query: 675  GTVNGVIGVIASLPHEQYLFLEKLQTNLRKVIKGVGGLNHEQWRSFNNEKKT----VDA- 729
            G+  G I  +  +P   +  L  LQ  +   +     LN  ++R      +      DA 
Sbjct: 1797 GSSEGGIAALIPVPERVFRRLFTLQNVMISALPQNCALNPREFRVMKANGRVRSGRADAW 1856

Query: 730  ------KNFLDGDLIESFLDLSRTRMDEISKTMNVSVEELCKRVEELTR 772
                  K FLDG ++  FL L      E+++ +  + E + + + EL R
Sbjct: 1857 CKQKWKKGFLDGQVLCRFLHLDYVAQKELARCIGTNPEVIIQNLSELQR 1905



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 12/121 (9%)

Query: 52  QVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRS-STDDP-------FDTFL 103
           ++V   G+ KDGS+ ++ +G+      + EL G + MW++   S+D P       +D++L
Sbjct: 752 ELVVSGGSSKDGSISVIHHGLRPIVSTAAELSGCRAMWTVVGMSSDVPESQVTRRYDSYL 811

Query: 104 VVSFISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQ--LVQVTSGSVRLVSST 161
           ++S    T IL    E E  E +  GF +   TL C   +++Q  +VQV    VR++   
Sbjct: 812 ILSVAQRTMILRTGEEMEPLEDD-SGFYTCGPTL-CATNLFSQRRIVQVFKQGVRVMQQA 869

Query: 162 S 162
           S
Sbjct: 870 S 870


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,010,339,883
Number of Sequences: 23463169
Number of extensions: 517859552
Number of successful extensions: 1180459
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 545
Number of HSP's that attempted gapping in prelim test: 1174168
Number of HSP's gapped (non-prelim): 2366
length of query: 774
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 623
effective length of database: 8,816,256,848
effective search space: 5492528016304
effective search space used: 5492528016304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)