Query 004100
Match_columns 773
No_of_seqs 448 out of 3256
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 14:16:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 7E-33 2.4E-37 290.7 29.0 245 23-309 6-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 6.2E-32 2.1E-36 283.5 28.9 229 200-475 19-272 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 3.5E-32 1.2E-36 286.5 20.7 247 22-309 6-276 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 9.2E-32 3.2E-36 283.3 18.4 229 200-475 20-275 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 2.5E-20 8.7E-25 171.2 11.9 124 358-495 9-132 (133)
6 2dmh_A Myoferlin; beta-sandwic 99.8 2.1E-19 7.3E-24 166.7 16.7 126 360-497 5-135 (140)
7 2dmh_A Myoferlin; beta-sandwic 99.8 3E-19 1E-23 165.7 17.6 124 35-164 4-134 (140)
8 2ep6_A MCTP2 protein; beta san 99.8 8.5E-20 2.9E-24 167.7 13.1 125 30-162 5-131 (133)
9 1wfj_A Putative elicitor-respo 99.8 1.6E-19 5.3E-24 166.7 13.4 124 359-497 7-132 (136)
10 2fk9_A Protein kinase C, ETA t 99.8 1.7E-19 5.7E-24 168.6 13.3 119 359-494 26-156 (157)
11 1wfj_A Putative elicitor-respo 99.8 1.8E-19 6E-24 166.4 12.2 124 35-165 7-132 (136)
12 3kwu_A MUNC13-1; calcium bindi 99.8 8.9E-19 3E-23 164.1 16.8 128 361-494 16-146 (148)
13 3b7y_A E3 ubiquitin-protein li 99.8 1.3E-18 4.4E-23 164.0 17.0 129 34-163 16-153 (153)
14 3b7y_A E3 ubiquitin-protein li 99.8 6.1E-19 2.1E-23 166.2 14.0 126 358-495 16-153 (153)
15 3m7f_B E3 ubiquitin-protein li 99.8 2.5E-18 8.5E-23 166.0 17.2 129 35-164 5-142 (176)
16 3kwu_A MUNC13-1; calcium bindi 99.8 3.1E-18 1.1E-22 160.4 17.3 119 36-162 15-146 (148)
17 3m7f_B E3 ubiquitin-protein li 99.8 1.9E-18 6.5E-23 166.8 14.6 127 358-496 4-142 (176)
18 1rlw_A Phospholipase A2, CALB 99.8 1E-18 3.4E-23 158.9 10.9 117 362-493 3-123 (126)
19 2fk9_A Protein kinase C, ETA t 99.8 2.5E-18 8.6E-23 160.6 13.5 120 197-333 26-156 (157)
20 1gmi_A Protein kinase C, epsil 99.8 1.6E-18 5.6E-23 159.7 12.0 119 361-496 5-134 (136)
21 1rlw_A Phospholipase A2, CALB 99.8 3.9E-18 1.3E-22 155.0 13.1 115 37-160 2-122 (126)
22 1gmi_A Protein kinase C, epsil 99.8 3E-18 1E-22 157.9 11.8 116 37-163 5-133 (136)
23 2b3r_A Phosphatidylinositol-4- 99.8 8.1E-18 2.8E-22 154.4 14.5 115 24-146 8-131 (134)
24 2nq3_A Itchy homolog E3 ubiqui 99.8 6.5E-18 2.2E-22 161.7 14.4 127 35-163 33-161 (173)
25 2z0u_A WW domain-containing pr 99.8 1.9E-18 6.3E-23 162.4 9.8 116 23-144 30-154 (155)
26 2bwq_A Regulating synaptic mem 99.7 8.8E-18 3E-22 153.4 12.6 113 24-144 6-129 (129)
27 1rsy_A Synaptotagmin I; calciu 99.7 1.4E-17 4.9E-22 156.5 13.9 118 22-146 28-151 (152)
28 2d8k_A Synaptotagmin VII; exoc 99.7 1.3E-17 4.4E-22 154.7 13.1 118 23-147 13-137 (141)
29 1rsy_A Synaptotagmin I; calciu 99.7 1.4E-17 4.8E-22 156.6 13.4 106 359-475 39-150 (152)
30 2d8k_A Synaptotagmin VII; exoc 99.7 3.3E-17 1.1E-21 152.0 15.7 106 360-476 24-136 (141)
31 3pyc_A E3 ubiquitin-protein li 99.7 2.2E-17 7.6E-22 151.3 13.8 119 37-161 4-131 (132)
32 1rh8_A Piccolo protein; beta-s 99.7 5.4E-18 1.9E-22 157.6 9.8 116 23-147 7-140 (142)
33 3f04_A Synaptotagmin-1; C2A, c 99.7 1.4E-17 4.7E-22 155.0 12.5 116 23-145 21-142 (143)
34 3pyc_A E3 ubiquitin-protein li 99.7 1.9E-17 6.6E-22 151.7 13.1 123 362-493 5-131 (132)
35 1v27_A Regulating synaptic mem 99.7 6.8E-18 2.3E-22 156.7 10.0 118 23-148 8-136 (141)
36 2z0u_A WW domain-containing pr 99.7 8.5E-18 2.9E-22 157.9 10.6 105 359-474 40-154 (155)
37 3fdw_A Synaptotagmin-like prot 99.7 7.1E-18 2.4E-22 157.9 9.3 122 321-477 7-136 (148)
38 1wfm_A Synaptotagmin XIII; C2 99.7 6.2E-17 2.1E-21 149.4 14.9 116 22-147 12-134 (138)
39 2bwq_A Regulating synaptic mem 99.7 2.6E-17 8.9E-22 150.2 12.2 102 360-473 16-128 (129)
40 3f04_A Synaptotagmin-1; C2A, c 99.7 2.3E-17 7.8E-22 153.5 11.9 105 359-474 31-141 (143)
41 3rdl_A Protein kinase C alpha 99.7 2.9E-17 9.9E-22 151.6 12.0 115 23-147 5-126 (137)
42 2nq3_A Itchy homolog E3 ubiqui 99.7 4.4E-17 1.5E-21 155.9 13.6 124 359-495 33-161 (173)
43 3fbk_A RGS3, RGP3, regulator o 99.7 4.6E-17 1.6E-21 153.2 13.4 117 23-147 14-139 (153)
44 1v27_A Regulating synaptic mem 99.7 4.6E-17 1.6E-21 151.0 13.1 119 321-476 5-134 (141)
45 2b3r_A Phosphatidylinositol-4- 99.7 4.4E-17 1.5E-21 149.5 12.6 103 361-475 19-130 (134)
46 3fdw_A Synaptotagmin-like prot 99.7 1.6E-17 5.5E-22 155.5 9.5 119 23-148 10-137 (148)
47 2dmg_A KIAA1228 protein; beta- 99.7 3.8E-17 1.3E-21 151.8 12.0 121 321-476 8-136 (142)
48 1wfm_A Synaptotagmin XIII; C2 99.7 1.1E-16 3.7E-21 147.7 14.7 117 321-476 10-133 (138)
49 3fbk_A RGS3, RGP3, regulator o 99.7 4.1E-17 1.4E-21 153.6 11.5 105 359-475 24-137 (153)
50 1ugk_A Synaptotagmin IV, KIAA1 99.7 9E-17 3.1E-21 148.5 13.7 119 23-147 9-135 (138)
51 2q3x_A Regulating synaptic mem 99.7 4.3E-17 1.5E-21 156.3 11.7 105 362-476 30-140 (171)
52 3rdl_A Protein kinase C alpha 99.7 7E-17 2.4E-21 149.0 12.7 103 362-476 16-125 (137)
53 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.3E-16 4.3E-21 147.4 14.3 119 321-475 6-133 (138)
54 1a25_A CALB, protein kinase C 99.7 8.1E-17 2.8E-21 150.8 12.8 115 23-147 20-141 (149)
55 2q3x_A Regulating synaptic mem 99.7 6.3E-17 2.2E-21 155.1 11.9 116 22-147 18-141 (171)
56 1tjx_A Similar to synaptotagmi 99.7 1.9E-16 6.4E-21 150.1 14.7 119 321-475 9-147 (159)
57 2enp_A B/K protein; C2 type 1, 99.7 1.1E-16 3.6E-21 149.7 12.8 122 321-475 10-141 (147)
58 1rh8_A Piccolo protein; beta-s 99.7 2.9E-17 1E-21 152.6 8.8 103 362-475 18-138 (142)
59 2chd_A Rabphilin-3A, exophilin 99.7 7.9E-17 2.7E-21 149.6 11.7 118 22-146 15-141 (142)
60 2dmg_A KIAA1228 protein; beta- 99.7 6.5E-17 2.2E-21 150.2 10.9 118 23-148 11-138 (142)
61 2chd_A Rabphilin-3A, exophilin 99.7 9.9E-17 3.4E-21 149.0 11.8 104 360-474 27-139 (142)
62 1tjx_A Similar to synaptotagmi 99.7 1.8E-16 6.3E-21 150.2 13.6 120 23-147 12-149 (159)
63 3n5a_A Synaptotagmin-7; calciu 99.7 2E-16 6.9E-21 146.1 13.2 93 359-462 13-113 (138)
64 1a25_A CALB, protein kinase C 99.7 1.6E-16 5.5E-21 148.8 12.5 102 362-475 31-139 (149)
65 2cm5_A Rabphilin-3A; protein t 99.7 3.4E-16 1.2E-20 149.4 14.5 119 321-475 21-159 (166)
66 2cm5_A Rabphilin-3A; protein t 99.7 2.2E-16 7.7E-21 150.7 13.2 101 25-127 26-134 (166)
67 3n5a_A Synaptotagmin-7; calciu 99.7 1.7E-16 5.7E-21 146.7 11.6 114 25-147 5-126 (138)
68 1w15_A Synaptotagmin IV; metal 99.7 3.7E-16 1.3E-20 147.1 13.4 117 22-147 16-140 (153)
69 2enp_A B/K protein; C2 type 1, 99.7 1.4E-16 4.8E-21 148.9 10.1 119 22-147 12-143 (147)
70 1w15_A Synaptotagmin IV; metal 99.7 8.5E-16 2.9E-20 144.6 14.2 116 321-474 14-137 (153)
71 3l9b_A Otoferlin; C2-domain, b 99.7 6.9E-16 2.3E-20 137.6 12.6 116 39-164 22-141 (144)
72 2cjt_A UNC-13 homolog A, MUNC1 99.6 2.4E-15 8.1E-20 137.0 13.0 87 36-129 3-91 (131)
73 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.5E-15 5.2E-20 138.2 11.5 86 361-463 4-90 (131)
74 3l9b_A Otoferlin; C2-domain, b 99.6 3.5E-15 1.2E-19 133.0 11.6 119 362-498 21-143 (144)
75 2cjs_A UNC-13 homolog A, MUNC1 99.6 5.9E-15 2E-19 139.9 13.1 119 36-162 12-140 (167)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 1E-14 3.4E-19 138.3 12.8 118 360-494 12-140 (167)
77 3jzy_A Intersectin 2; C2 domai 99.5 1.3E-14 4.3E-19 164.8 12.4 119 359-494 384-507 (510)
78 3nsj_A Perforin-1; pore formin 99.5 4.2E-14 1.4E-18 157.9 15.6 114 359-497 391-506 (540)
79 3jzy_A Intersectin 2; C2 domai 99.5 1.8E-14 6.1E-19 163.6 12.9 123 35-162 384-507 (510)
80 3nsj_A Perforin-1; pore formin 99.5 5.2E-14 1.8E-18 157.2 14.5 112 35-163 391-504 (540)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.8E-13 6.2E-18 156.4 17.2 119 36-162 495-623 (624)
82 3bxj_A RAS GTPase-activating p 99.4 8.5E-15 2.9E-19 163.3 0.2 121 360-496 9-158 (483)
83 1djx_A PLC-D1, phosphoinositid 99.4 5.1E-13 1.7E-17 152.7 13.9 120 360-493 495-622 (624)
84 1cjy_A CPLA2, protein (cytosol 99.4 2.3E-13 7.9E-18 156.4 10.4 107 35-146 15-127 (749)
85 1cjy_A CPLA2, protein (cytosol 99.4 4.4E-13 1.5E-17 154.1 8.2 104 359-474 15-125 (749)
86 3bxj_A RAS GTPase-activating p 99.3 3.5E-13 1.2E-17 150.3 -0.3 100 37-147 10-118 (483)
87 3qr0_A Phospholipase C-beta (P 99.2 1.7E-10 5.8E-15 134.2 15.4 112 37-163 649-771 (816)
88 3ohm_B 1-phosphatidylinositol- 99.2 1.4E-10 4.9E-15 135.4 14.6 111 38-163 725-845 (885)
89 3pfq_A PKC-B, PKC-beta, protei 99.2 6E-11 2.1E-15 138.5 10.9 113 27-147 163-282 (674)
90 2zkm_X 1-phosphatidylinositol- 99.1 3.3E-10 1.1E-14 132.7 15.0 112 36-162 676-798 (799)
91 3pfq_A PKC-B, PKC-beta, protei 99.1 8.6E-11 2.9E-15 137.2 9.4 102 362-475 172-280 (674)
92 3qr0_A Phospholipase C-beta (P 99.0 1.1E-09 3.6E-14 127.5 13.6 110 361-494 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.0 7.9E-10 2.7E-14 129.2 12.4 109 362-494 725-844 (885)
94 2zkm_X 1-phosphatidylinositol- 98.9 4.8E-09 1.6E-13 122.9 14.5 113 198-332 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 98.7 5E-08 1.7E-12 84.3 10.4 114 38-162 6-124 (126)
96 1yrk_A NPKC-delta, protein kin 98.7 1.5E-07 5.1E-12 81.3 12.7 108 362-493 6-123 (126)
97 2enj_A NPKC-theta, protein kin 98.7 1.5E-07 5.3E-12 82.3 11.7 110 361-493 9-128 (138)
98 2enj_A NPKC-theta, protein kin 98.7 5.3E-08 1.8E-12 85.2 8.1 114 38-162 10-129 (138)
99 2yrb_A Protein fantom; beta sa 93.3 0.19 6.6E-06 45.4 7.3 126 33-164 13-151 (156)
100 3l4c_A Dedicator of cytokinesi 88.5 5.1 0.00017 38.4 12.3 40 71-110 78-119 (220)
101 2wxf_A Phosphatidylinositol-4, 88.4 3 0.0001 49.3 12.9 106 31-162 213-340 (940)
102 3hhm_A Phosphatidylinositol-4, 85.3 5.4 0.00019 47.6 12.8 106 31-161 351-470 (1091)
103 2yrb_A Protein fantom; beta sa 84.7 4.1 0.00014 36.7 8.8 125 359-496 15-151 (156)
104 2wxf_A Phosphatidylinositol-4, 81.6 4.2 0.00014 48.1 9.8 94 362-461 217-324 (940)
105 3hhm_A Phosphatidylinositol-4, 81.6 5.5 0.00019 47.5 10.7 91 362-461 355-455 (1091)
106 2y3a_A Phosphatidylinositol-4, 77.1 2.7 9.4E-05 50.3 6.4 94 362-461 353-470 (1092)
107 3l4c_A Dedicator of cytokinesi 74.2 28 0.00096 33.2 11.3 40 232-272 77-118 (220)
108 1e7u_A Phosphatidylinositol 3- 73.3 19 0.00064 42.7 12.0 75 31-109 214-296 (961)
109 1e7u_A Phosphatidylinositol 3- 69.3 11 0.00039 44.6 9.0 96 362-461 218-330 (961)
110 2y3a_A Phosphatidylinositol-4, 67.4 5.8 0.0002 47.6 6.0 73 31-109 349-430 (1092)
111 3hd7_A Vesicle-associated memb 25.7 1.4E+02 0.0049 23.9 6.0 38 677-714 34-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=7e-33 Score=290.74 Aligned_cols=245 Identities=24% Similarity=0.391 Sum_probs=203.2
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeeeeccCCCCCCeeecEEEEEec--CCC
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKD--RIQ 97 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~---~~~~T~~~~~~~nP~WnE~f~f~v~--~~~ 97 (773)
|...+++.|+ ...+.|.|+|++|+||+..|..+.+||||++++++ ++++|++++++.||.|||+|.|.+. +..
T Consensus 6 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~ 83 (284)
T 2r83_A 6 GKLQYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELA 83 (284)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCT
T ss_pred eEEEEEEEEE--CCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhC
Confidence 4456777776 45689999999999999999889999999999964 4788999999999999999999985 345
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC--CceeeEEEEEEEEeccCCCCCCcccc
Q 004100 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG--DKVRGELMLAVWMGTQADEAFPEAWH 174 (773)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~--~~~~G~i~l~~~~~~~~d~~~~~~~~ 174 (773)
...|.|+|||.+.. +|++||++.++|.++..+. ....|++|....+ ....|+|.+++.+.+
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p----------- 147 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYVP----------- 147 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEET-----------
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEecC-----------
Confidence 68999999999988 8999999999999997642 3578999988653 235699998887653
Q ss_pred cccccccccccccccccceeccCceEEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---EEEEeecccCCCCCcccc
Q 004100 175 SDAATVTGIEGLANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLG--N---QALRTRVSASRTINPMWN 249 (773)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~wn 249 (773)
..+.|.|+|++|++|+.++.++.+||||++.+. + ++++|+++++ +.||.||
T Consensus 148 -----------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wn 203 (284)
T 2r83_A 148 -----------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYN 203 (284)
T ss_dssp -----------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEE
T ss_pred -----------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEc
Confidence 224699999999999999999999999999994 2 4678999876 9999999
Q ss_pred ceEEEEeeCCC--CCeEEEEEEEccCCCCCceeEEEEEeccccccc--------cCCCCCCceEEEcccC
Q 004100 250 EDLMFVAAEPF--EEHLILTVEDRVAPNKDEVLGKCMIPLQYVDKR--------LDHKPVNTRWYNLEKH 309 (773)
Q Consensus 250 e~f~f~~~~~~--~~~l~i~V~d~~~~~~d~~iG~~~i~L~~l~~~--------~~~~~~~~~w~~L~~~ 309 (773)
|.|.|.+.... ...|.|+|||++..+++++||++.+++..+... ...+....+|+.|.+.
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999986543 447999999999999999999999999864321 1233456789999875
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=6.2e-32 Score=283.52 Aligned_cols=229 Identities=25% Similarity=0.352 Sum_probs=190.4
Q ss_pred EEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---EEEEeecccCCCCCccccceEEEEeeCC--CCCeEEEEEEEccCC
Q 004100 200 WYLRVNVIEAQDLQPTDKGRFPEVYVKAQLGN---QALRTRVSASRTINPMWNEDLMFVAAEP--FEEHLILTVEDRVAP 274 (773)
Q Consensus 200 ~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~---~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~l~i~V~d~~~~ 274 (773)
+.|+|+|++|++|+.++.++.+||||++.++. +.++|+++++ +.||.|||+|.|.+... ....|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 47999999999999999999999999999963 5789999887 99999999999998643 356899999999998
Q ss_pred CCCceeEEEEEeccccccccCCCCCCceEEEcccCcccccccccCCceeeEEEEEEEEccCcccCCCCCccCCCCCcccc
Q 004100 275 NKDEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLEGGYHVLDESTHYSSDLRPTAK 354 (773)
Q Consensus 275 ~~d~~iG~~~i~L~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~ 354 (773)
+++++||++.++|.++.. ......|++|...... .....|.+.+.+.+
T Consensus 98 ~~~~~lG~~~i~l~~l~~----~~~~~~w~~L~~~~~~------~~~~~G~i~l~l~~---------------------- 145 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDF----GHVTEEWRDLQSAEKE------EQEKLGDICFSLRY---------------------- 145 (284)
T ss_dssp SCCCEEEEEEEEGGGCCC----SSCEEEEEECBCCSSC------CCCCCCEEEEEEEE----------------------
T ss_pred CCCceeEEEEEcchhccc----CCcceeEEEeeccccc------cccccccEEEEEEe----------------------
Confidence 899999999999999864 2346789999875211 12346888777653
Q ss_pred ccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC--C---eeeeeeeccCCCCCccccEEEEEEeCC---Cce
Q 004100 355 QLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTV 426 (773)
Q Consensus 355 ~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~ 426 (773)
.+..+.|.|.|++|+||+.+ +..|.+||||++.+. + ...+|+++++++||.|||.|.|.+... ...
T Consensus 146 ---~p~~~~l~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 219 (284)
T 2r83_A 146 ---VPTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQ 219 (284)
T ss_dssp ---ETTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEE
T ss_pred ---cCcCCceEEEEEEeECCCCc---CCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceE
Confidence 23347999999999999987 455889999999983 3 357999999999999999999998754 357
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCcc------------ccCCeEEeeEEeEe
Q 004100 427 ITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTL------------ETDRVYTHSYPLLV 475 (773)
Q Consensus 427 l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~~~~L~~ 475 (773)
|.|+|||+|.++ +|++||++.|++..+ ..++...+||+|..
T Consensus 220 l~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 220 VVVTVLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp EEEEEEECCSSS--------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred EEEEEEeCCCCC--------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 999999999876 899999999999874 24567889999965
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=3.5e-32 Score=286.54 Aligned_cols=247 Identities=29% Similarity=0.426 Sum_probs=199.6
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeccCCCCCCeeecEEEEEec--CC
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM---GNYKGTTRHFEKKTNPEWNQVFAFSKD--RI 96 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~---~~~~~~T~~~~~~~nP~WnE~f~f~v~--~~ 96 (773)
.|...+++.|+ ...+.|.|+|++|++|+..|..|.+||||++++ +.++++|++++++.||+|||+|.|.+. ++
T Consensus 6 ~G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 83 (296)
T 1dqv_A 6 CGRISFALRYL--YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAEL 83 (296)
T ss_dssp SCEEEEEEECC--SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred eeEEEEEEEEe--CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHh
Confidence 34456666666 556899999999999999998999999999999 447889999999999999999999984 33
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEE-cCccCCCCCCCCCCcCeEEEeeeCCC-CceeeEEEEEEEEeccCCCCCCccc
Q 004100 97 QSSVLEVTVKDKDFV-KDDFMGRVLFD-LNEIPKRVPPDSPLAPQWYRLEDRKG-DKVRGELMLAVWMGTQADEAFPEAW 173 (773)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~~~d~~~~~~~ 173 (773)
....|.|+|||.|.+ +|++||++.++ +.++.... .....|++|....+ ....|+|.+++.+.+
T Consensus 84 ~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~---------- 149 (296)
T 1dqv_A 84 AQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP---------- 149 (296)
T ss_dssp SSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET----------
T ss_pred cCCEEEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc----------
Confidence 456899999999998 89999999995 55554321 23467999987543 235699999887753
Q ss_pred ccccccccccccccccccceeccCceEEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---EEEEeecccCCCCCccc
Q 004100 174 HSDAATVTGIEGLANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLG--N---QALRTRVSASRTINPMW 248 (773)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~kT~~~~~~t~nP~w 248 (773)
..+.|+|+|++|++|..++..|.+||||++++. + ++++|+++++ +.||.|
T Consensus 150 ------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~w 204 (296)
T 1dqv_A 150 ------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTY 204 (296)
T ss_dssp ------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEE
T ss_pred ------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeE
Confidence 124799999999999999999999999999996 2 5789999876 999999
Q ss_pred cceEEEEeeCCC--CCeEEEEEEEccCCCCCceeEEEEEecccccc-cc--------CCCCCCceEEEcccC
Q 004100 249 NEDLMFVAAEPF--EEHLILTVEDRVAPNKDEVLGKCMIPLQYVDK-RL--------DHKPVNTRWYNLEKH 309 (773)
Q Consensus 249 ne~f~f~~~~~~--~~~l~i~V~d~~~~~~d~~iG~~~i~L~~l~~-~~--------~~~~~~~~w~~L~~~ 309 (773)
||.|.|.+.... ...|.|+|||++..+++++||++.+++.++.. .. ..+....+|+.|...
T Consensus 205 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 205 NEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp EECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 999999886543 44799999999999999999999999997643 00 123456678888765
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=9.2e-32 Score=283.33 Aligned_cols=229 Identities=23% Similarity=0.357 Sum_probs=187.3
Q ss_pred EEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCEEEEeecccCCCCCccccceEEEEeeCC--CCCeEEEEEEEccCC
Q 004100 200 WYLRVNVIEAQDLQPTDKGRFPEVYVKAQL---GNQALRTRVSASRTINPMWNEDLMFVAAEP--FEEHLILTVEDRVAP 274 (773)
Q Consensus 200 ~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l---~~~~~kT~~~~~~t~nP~wne~f~f~~~~~--~~~~l~i~V~d~~~~ 274 (773)
+.|+|+|++|++|+.++.+|.+||||++.+ ++++++|+++++ +.||.|||+|.|.+... ....|.|+|||++..
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~ 98 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRF 98 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCC
Confidence 479999999999999999999999999999 567899999877 99999999999998543 245899999999999
Q ss_pred CCCceeEEEEEe-ccccccccCCCCCCceEEEcccCcccccccccCCceeeEEEEEEEEccCcccCCCCCccCCCCCccc
Q 004100 275 NKDEVLGKCMIP-LQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLEGGYHVLDESTHYSSDLRPTA 353 (773)
Q Consensus 275 ~~d~~iG~~~i~-L~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~ 353 (773)
+++++||++.++ +.++.. .......|+.|..... .....|.+.+.++.
T Consensus 99 ~~~~~iG~~~i~~l~~~~~---~~~~~~~w~~L~~~~~-------~~~~~G~i~vsl~y--------------------- 147 (296)
T 1dqv_A 99 SRHDLIGQVVLDNLLELAE---QPPDRPLWRDILEGGS-------EKADLGELNFSLCY--------------------- 147 (296)
T ss_dssp SCCCEEEEEECCCTTGGGS---SCSSCCCCEECBCCSS-------CCSCCCEEEEEEEE---------------------
T ss_pred CCCceEEEEEecccccccc---CCccceeeeccccccc-------cccccceEEEEEEe---------------------
Confidence 999999999996 444432 1233567999976521 12346888887763
Q ss_pred cccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC--C---eeeeeeeccCCCCCccccEEEEEEeCC---Cc
Q 004100 354 KQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG--Q---KWVRTRTIIDSPTPKWNEQYTWEVFDP---CT 425 (773)
Q Consensus 354 ~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~--~---~~~~T~~~~~t~~P~wne~~~f~v~~~---~~ 425 (773)
.+..|.|.|.|++|+||+.+ +..|.+||||++.++ + .+.||+++++++||.|||.|.|.+... ..
T Consensus 148 ----~~~~~~l~v~v~~a~~L~~~---d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 220 (296)
T 1dqv_A 148 ----LPTAGLLTVTIIKASNLKAM---DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENV 220 (296)
T ss_dssp ----ETTTTEEEEEEEEEESCCCC---SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSC
T ss_pred ----ccccceeEEEEEEeecCCcc---CCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCc
Confidence 23348999999999999987 455889999999995 3 457999999999999999999998754 45
Q ss_pred eEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccc-------------cCCeEEeeEEeEe
Q 004100 426 VITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-------------TDRVYTHSYPLLV 475 (773)
Q Consensus 426 ~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~-------------~~~~~~~~~~L~~ 475 (773)
.|.|+|||+|.++ +|++||.+.|++..+. .++...+|++|..
T Consensus 221 ~L~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 221 GLSIAVVDYDCIG--------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp CCCCEEEECCSSS--------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred EEEEEEEeCCCCC--------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 8999999999876 8999999999998763 3556677888854
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=2.5e-20 Score=171.24 Aligned_cols=124 Identities=25% Similarity=0.448 Sum_probs=109.6
Q ss_pred cCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeCCCceEEEEEEeCCCC
Q 004100 358 KSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHL 437 (773)
Q Consensus 358 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~ 437 (773)
....|.|.|.|++|+||+.+ +..|.+||||++.++++.+||+++++++||.|||.|.|.+.++...|.|+|||+|.+
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAA---DFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCS---SSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCC---CCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 46679999999999999987 455889999999999999999999999999999999999998889999999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcccccEEEEEEEEee
Q 004100 438 HGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTC 495 (773)
Q Consensus 438 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~ 495 (773)
+ +|++||++.|++.++..+. .+||+|.....++ +..|+|+|+++|.+
T Consensus 86 ~--------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K--------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E--------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C--------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 5 7899999999999998776 5899998654433 45699999999854
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.1e-19 Score=166.69 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=108.0
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeC----CCceEEEEEEeCC
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNC 435 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~d~~ 435 (773)
..|.|.|.|++|+||+.+ +. |.+||||+++++++.+||+++++++||+|||.|.|.+.. ....|+|+|||+|
T Consensus 5 ~~g~L~v~v~~a~~L~~~---~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKT---KF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCC---SS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCC---CC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 448999999999999987 45 789999999999999999999999999999999999975 3689999999999
Q ss_pred CCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEee-cCCCcccccEEEEEEEEeecc
Q 004100 436 HLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL-YPNGVKKMGEIHLAVRFTCSS 497 (773)
Q Consensus 436 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~v~l~~~~~~~~ 497 (773)
.++ +|++||++.|++.++..+.....||++... ...+....|+|+|+++|.|..
T Consensus 81 ~~~--------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 81 TIG--------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp CSS--------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCC--------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 876 789999999999999988888899983322 223434569999999997643
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=3e-19 Score=165.67 Aligned_cols=124 Identities=25% Similarity=0.401 Sum_probs=109.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEecCC---CCceEEEEEEeCCCC
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRI---QSSVLEVTVKDKDFV 111 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~~~---~~~~l~i~V~d~~~~ 111 (773)
...|.|.|+|++|+||+..+. +.+||||++++++++++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 345799999999999999998 9999999999999999999999999999999999998643 468899999999998
Q ss_pred -CCeeeEEEEEEcCccCCCCCCCCCCcCeEEE---eeeCCCCceeeEEEEEEEEecc
Q 004100 112 -KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYR---LEDRKGDKVRGELMLAVWMGTQ 164 (773)
Q Consensus 112 -~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~G~i~l~~~~~~~ 164 (773)
+|++||++.++|.++..+. ....|++ |.+..+....|+|++++.|.+.
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 8999999999999997543 3468988 7777666678999999999864
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=8.5e-20 Score=167.71 Aligned_cols=125 Identities=35% Similarity=0.540 Sum_probs=110.8
Q ss_pred eecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCC
Q 004100 30 TYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKD 109 (773)
Q Consensus 30 ~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~ 109 (773)
+..+.+..+.|.|+|++|++|+..+..|.+||||++++++++++|++++++.||.|||+|.|.+.+. ...|.|+|||.+
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d 83 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDED 83 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECC
Confidence 4556788999999999999999999889999999999999999999999999999999999999864 578999999999
Q ss_pred CC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCC-ceeeEEEEEEEEe
Q 004100 110 FV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMG 162 (773)
Q Consensus 110 ~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~ 162 (773)
.. +|++||++.++|.++..+ ..+||+|....+. ...|+|++++.+.
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 98 899999999999999643 2489999987633 4679999998764
No 9
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=1.6e-19 Score=166.70 Aligned_cols=124 Identities=23% Similarity=0.360 Sum_probs=109.0
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeecc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCC
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHL 437 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~ 437 (773)
.+.|.|.|+|++|+||+.. +..|.+||||+++++++.+||++++ +++||.|||.|.|.+.+....|+|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDA---DFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSC---CSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCc---ccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 4569999999999999987 4458899999999999999999998 89999999999999998888999999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecCcc-ccCCeEEeeEEeEeecCCCcccccEEEEEEEEeecc
Q 004100 438 HGGDKAGGARDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCSS 497 (773)
Q Consensus 438 ~~~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~~~ 497 (773)
+ +|++||++.|+|.++ ..+.....||+|.. . .+..|+|+|+++|.|..
T Consensus 84 ~--------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~---~-~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 84 T--------EDDAVGEATIPLEPVFVEGSIPPTAYNVVK---D-EEYKGEIWVALSFKPSG 132 (136)
T ss_dssp T--------TTCCSEEEEEESHHHHHHSEEEEEEEEEEE---T-TEEEEEEEEEEEEEECC
T ss_pred C--------CCceEEEEEEEHHHhccCCCCCcEEEEeec---C-CccCEEEEEEEEEEeCC
Confidence 6 799999999999999 55666788999972 2 24569999999997753
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=1.7e-19 Score=168.61 Aligned_cols=119 Identities=22% Similarity=0.289 Sum_probs=101.9
Q ss_pred CccceEEEEEEEccCCCCCccCC-------CCCCCCcEEEEEECCee-eeeeeccCCCCCccccEEEEEEeCCCceEEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKD-------GRGTTDAYCVAKYGQKW-VRTRTIIDSPTPKWNEQYTWEVFDPCTVITIG 430 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~-------~~~~~dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~ 430 (773)
...|.|+|+|++|+||+++|... ..|.+||||++.++++. .||+++++|+||.|||+|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 45699999999999999875210 13679999999999876 699999999999999999999876 4689999
Q ss_pred EEeCCCCCCCCCCCCCCCCccEEEEEecCccccC----CeEEeeEEeEeecCCCcccccEEEEEEEEe
Q 004100 431 VFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETD----RVYTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (773)
Q Consensus 431 v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~ 494 (773)
|||+|.++ +|++||++.|++.++..+ .....||+|. ..|+|+|+++|.
T Consensus 105 V~D~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG--------YDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS--------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEECCCCC--------CCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEEE
Confidence 99999876 799999999999999754 7789999993 259999999873
No 11
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=1.8e-19 Score=166.36 Aligned_cols=124 Identities=27% Similarity=0.417 Sum_probs=109.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-C
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-K 112 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~-~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~ 112 (773)
.+.+.|.|+|++|++|+..+..+.+||||++++++++++|++++ ++.||.|||+|.|.+.+ ....|.|+|||++.+ +
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCTT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCCC
Confidence 56789999999999999999889999999999999999999998 89999999999999986 568899999999988 8
Q ss_pred CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEeccC
Q 004100 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGTQA 165 (773)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~~~ 165 (773)
|++||++.++|.++.... .....||+|. .+.+..|+|++++.|.+..
T Consensus 86 d~~lG~~~i~l~~l~~~~----~~~~~w~~L~--~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEG----SIPPTAYNVV--KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHS----EEEEEEEEEE--ETTEEEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhccCC----CCCcEEEEee--cCCccCEEEEEEEEEEeCC
Confidence 999999999999995331 2356899998 3446789999999998643
No 12
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=8.9e-19 Score=164.14 Aligned_cols=128 Identities=23% Similarity=0.355 Sum_probs=104.8
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC-
Q 004100 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG- 439 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~- 439 (773)
.|.|.|.|++|+||+.+ +..|.+||||++.++++.++|+++++++||.|||.|.|.+..+...|.|+|||+|....
T Consensus 16 ~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAK---DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCC---CCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 48999999999999987 44588999999999999999999999999999999999999888999999999987400
Q ss_pred --CCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcccccEEEEEEEEe
Q 004100 440 --GDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (773)
Q Consensus 440 --~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~ 494 (773)
.++...++|++||++.|++.++. ....+||+|......+ ...|+|+|++.|.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 00000027999999999999993 4568999997543322 3469999999884
No 13
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=1.3e-18 Score=164.01 Aligned_cols=129 Identities=29% Similarity=0.448 Sum_probs=103.1
Q ss_pred cCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEe
Q 004100 34 VEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKD 107 (773)
Q Consensus 34 ~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~------~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d 107 (773)
.+..+.|.|+|++|++|+..+..+.+||||++++.+ .+++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 466789999999999999999889999999999974 578999999999999999999999763 5789999999
Q ss_pred CCCC-CCeeeEEEEEEcCccCCCCCCC-CCCcCeEEEeeeCC-CCceeeEEEEEEEEec
Q 004100 108 KDFV-KDDFMGRVLFDLNEIPKRVPPD-SPLAPQWYRLEDRK-GDKVRGELMLAVWMGT 163 (773)
Q Consensus 108 ~~~~-~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~-~~~~~G~i~l~~~~~~ 163 (773)
++.. +|++||++.++|.++..+.... .....+||+|.... .....|+|++++.|.+
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 9998 8999999999999998664321 23446999998764 2356799999998853
No 14
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=6.1e-19 Score=166.24 Aligned_cols=126 Identities=25% Similarity=0.372 Sum_probs=101.7
Q ss_pred cCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------eeeeeeeccCCCCCccccEEEEEEeCCCceEEEEE
Q 004100 358 KSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGV 431 (773)
Q Consensus 358 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v 431 (773)
.+..+.|.|.|++|+||+.+ +..|.+||||++.+++ ..+||+++++++||.|||.|.|.+......|+|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKK---DILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCC---CCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 35568999999999999987 4457899999999964 56899999999999999999999998888999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccCCe------EEeeEEeEeecCCCcccccEEEEEEEEee
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRV------YTHSYPLLVLYPNGVKKMGEIHLAVRFTC 495 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~v~l~~~~~~ 495 (773)
||+|.++ +|++||++.|++.++..+.. ...||+|.....++ +..|+|+|+++|.|
T Consensus 93 ~d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 93 FDENRLT--------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp EECCSSS--------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred EECCCCc--------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 9999876 79999999999999976543 25899997654332 44699999999853
No 15
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=2.5e-18 Score=165.99 Aligned_cols=129 Identities=27% Similarity=0.452 Sum_probs=102.8
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeC
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDK 108 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~------~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~ 108 (773)
...|.|+|+|++|++|+..+..+.+||||++++++ .+++|++++++.||.|||+|.|.+... ...|.|+|||.
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 55789999999999999999889999999999986 578999999999999999999999753 57899999999
Q ss_pred CCC-CCeeeEEEEEEcCccCCCCCC-CCCCcCeEEEeeeCCC-CceeeEEEEEEEEecc
Q 004100 109 DFV-KDDFMGRVLFDLNEIPKRVPP-DSPLAPQWYRLEDRKG-DKVRGELMLAVWMGTQ 164 (773)
Q Consensus 109 ~~~-~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~~ 164 (773)
+.+ +|++||++.++|.++..+... +.....+||+|....+ .+..|+|++++.|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 998 899999999999999865432 1223448999998653 3467999999999875
No 16
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.78 E-value=3.1e-18 Score=160.44 Aligned_cols=119 Identities=32% Similarity=0.552 Sum_probs=104.6
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCC----
Q 004100 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV---- 111 (773)
Q Consensus 36 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~---- 111 (773)
..+.|.|+|++|++|+..|..|.+||||++.+++++++|++++++.||.|||+|.|.+... ...|.|+|||.+..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 3589999999999999999899999999999999999999999999999999999999764 47899999999973
Q ss_pred --------CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCC-ceeeEEEEEEEEe
Q 004100 112 --------KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMG 162 (773)
Q Consensus 112 --------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~ 162 (773)
+|++||++.++|.++... ..+||+|....+. ...|+|++++.|.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 899999999999999422 4689999976532 3579999998874
No 17
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=1.9e-18 Score=166.79 Aligned_cols=127 Identities=26% Similarity=0.386 Sum_probs=100.9
Q ss_pred cCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------eeeeeeeccCCCCCccccEEEEEEeCCCceEEEEE
Q 004100 358 KSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGV 431 (773)
Q Consensus 358 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v 431 (773)
....|.|.|.|++|+||+.+ +..|.+||||++.+++ ..++|+++++++||.|||.|.|.+......|.|+|
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V 80 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKK---DILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEV 80 (176)
T ss_dssp CTTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCc---CCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEE
Confidence 34569999999999999987 4558899999999975 56899999999999999999999997778999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeE-E-----eeEEeEeecCCCcccccEEEEEEEEeec
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVY-T-----HSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~v~l~~~~~~~ 496 (773)
||++.++ +|++||++.|+|.++..+... . .||+|.....++ +..|+|+|+++|.|.
T Consensus 81 ~d~d~~~--------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 81 FDENRLT--------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp EECC------------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred EECCCCC--------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 9999876 799999999999999776433 2 799997654433 346999999999664
No 18
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1e-18 Score=158.94 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=98.8
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC---eeeeeeeccCCCCCccccEEEEEEeC-CCceEEEEEEeCCCC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---KWVRTRTIIDSPTPKWNEQYTWEVFD-PCTVITIGVFDNCHL 437 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---~~~~T~~~~~t~~P~wne~~~f~v~~-~~~~l~v~v~d~~~~ 437 (773)
|.|.|.|++|+||+.++..+..|.+||||++.+++ ..+||+++++++||.|||.|.|.+.. ....|+|+|||+|..
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 79999999999999753223457899999999985 67899999999999999999999965 477999999999875
Q ss_pred CCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcccccEEEEEEEE
Q 004100 438 HGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRF 493 (773)
Q Consensus 438 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~ 493 (773)
+|++||++.|+|.++..+.....|++|.. ...|.|+++++.
T Consensus 83 ---------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~ 123 (126)
T 1rlw_A 83 ---------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEV 123 (126)
T ss_dssp ---------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEEC
T ss_pred ---------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEe
Confidence 48899999999999999999999999943 223666666653
No 19
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=2.5e-18 Score=160.63 Aligned_cols=120 Identities=23% Similarity=0.328 Sum_probs=101.5
Q ss_pred CceEEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCEE-EEeecccCCCCCccccceEEEEeeCCCCCeEE
Q 004100 197 PKLWYLRVNVIEAQDLQPTDK----------GRFPEVYVKAQLGNQA-LRTRVSASRTINPMWNEDLMFVAAEPFEEHLI 265 (773)
Q Consensus 197 p~~~~L~V~v~~a~~L~~~~~----------~~~~dpyv~v~l~~~~-~kT~~~~~~t~nP~wne~f~f~~~~~~~~~l~ 265 (773)
...|.|+|+|++|++|+++|. .+.+||||++.+++++ .+|+++++ |+||.|||+|.|.+.+ ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC--CCEEE
Confidence 456899999999999998873 3679999999999865 69999876 9999999999999875 35899
Q ss_pred EEEEEccCCCCCceeEEEEEeccccccccCCCCCCceEEEcccCcccccccccCCceeeEEEEEEEEc
Q 004100 266 LTVEDRVAPNKDEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICLE 333 (773)
Q Consensus 266 i~V~d~~~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~i~~~ 333 (773)
|+|||++..++|++||++.|+|.++....+.......||+|++ .|+|++++++.
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------------~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------------EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------------SCEEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------------CcEEEEEEEEE
Confidence 9999999999999999999999998754222345789999975 58999998864
No 20
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.77 E-value=1.6e-18 Score=159.69 Aligned_cols=119 Identities=19% Similarity=0.305 Sum_probs=100.5
Q ss_pred cceEEEEEEEccCCCCCccCCC--------CCCCCcEEEEEECCee-eeeeeccCCCCCccccEEEEEEeCCCceEEEEE
Q 004100 361 IGVLELGILNAQGLMPMKTKDG--------RGTTDAYCVAKYGQKW-VRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGV 431 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~--------~~~~dpyv~v~~~~~~-~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v 431 (773)
.|.|+|+|++|+||+++|.... .+.+||||++.+++.. .+|+++++++||.|||+|.|.+.++ ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 4899999999999998753200 1349999999998866 6999999999999999999999876 8999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccC--CeEEeeEEeEeecCCCcccccEEEEEEEEeec
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETD--RVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCS 496 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~~ 496 (773)
||+|.++ +|++||++.|++.++..+ .....|++|. ..|+|+|+++|...
T Consensus 84 ~d~d~~~--------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 84 FHDAPIG--------YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EECCSSS--------SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred EeCCCCC--------CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 9999876 799999999999999764 4568899883 25999999999654
No 21
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=3.9e-18 Score=155.05 Aligned_cols=115 Identities=27% Similarity=0.443 Sum_probs=98.5
Q ss_pred eeEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCC
Q 004100 37 MQYLYVRVVKAKDLPPK---DVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDF 110 (773)
Q Consensus 37 ~~~L~V~v~~a~~L~~~---d~~~~~dpyv~v~~~~---~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~ 110 (773)
.+.|.|+|++|+||+.. +..|.+||||++++++ ++++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 5568999999999986 68899999999999999999999965567899999999998
Q ss_pred CCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEE
Q 004100 111 VKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVW 160 (773)
Q Consensus 111 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~ 160 (773)
.+|++||++.++|.++..+. ....|++|... ..|+|++++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~----~~g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV----TEMVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT----EEEEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC----ceEEEEEEEE
Confidence 88999999999999997542 35689999752 3577777663
No 22
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=3e-18 Score=157.93 Aligned_cols=116 Identities=20% Similarity=0.369 Sum_probs=98.8
Q ss_pred eeEEEEEEEEeecCCCCCCCC-----------CCCcEEEEEECCee-eeeeccCCCCCCeeecEEEEEecCCCCceEEEE
Q 004100 37 MQYLYVRVVKAKDLPPKDVTG-----------SCDPYVEVKMGNYK-GTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVT 104 (773)
Q Consensus 37 ~~~L~V~v~~a~~L~~~d~~~-----------~~dpyv~v~~~~~~-~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~ 104 (773)
.|.|+|+|++|+||++.|..+ .+||||++.++++. .+|+++.++.||+|||+|.|.+.+. ..|.|+
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~~ 82 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEEE
Confidence 579999999999999887443 39999999998864 6899999999999999999999763 789999
Q ss_pred EEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEec
Q 004100 105 VKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGT 163 (773)
Q Consensus 105 V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~ 163 (773)
|||.+.. +|++||++.+++.++..+.. .....|++|.. .|+|++++.|.+
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEP------EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBS------SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCC------CeEEEEEEEEEe
Confidence 9999988 89999999999999986531 22478999864 589999998764
No 23
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.75 E-value=8.1e-18 Score=154.44 Aligned_cols=115 Identities=20% Similarity=0.382 Sum_probs=97.0
Q ss_pred CcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeecEEEEE-ec--C
Q 004100 24 GDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFS-KD--R 95 (773)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~-----~~~~~~T~~~~~~~nP~WnE~f~f~-v~--~ 95 (773)
...+..+|+.. .+.|.|+|++|+||+. +..+.+||||++++ +..+++|++++++.||+|||+|.|. +. +
T Consensus 8 ~~~~~~~~~~~--~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~ 84 (134)
T 2b3r_A 8 SGAVKLSVSYR--NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKET 84 (134)
T ss_dssp CCEEEEEEEEE--TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred cEEEEEEEeec--CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHH
Confidence 34566677764 4799999999999997 66889999999999 3467899999999999999999999 74 3
Q ss_pred CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeC
Q 004100 96 IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (773)
+....|.|+|||.+.. ++++||++.++|.++..+. ...+||+|.+.
T Consensus 85 l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 131 (134)
T 2b3r_A 85 LRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAA 131 (134)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC-
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCc
Confidence 3567999999999998 8999999999999997642 35799999875
No 24
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=6.5e-18 Score=161.70 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=104.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (773)
...+.|.|+|++|++|+..+..+.+||||++++++++++|+++++++||+|||+|.|.+.. ...|.|+|||++.+ +|
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~d 110 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSD 110 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCC
Confidence 3457899999999999944434559999999999999999999999999999999999864 78899999999998 89
Q ss_pred eeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC-CceeeEEEEEEEEec
Q 004100 114 DFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG-DKVRGELMLAVWMGT 163 (773)
Q Consensus 114 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~~~~~~ 163 (773)
++||++.++|.++..+..........|++|....+ ....|+|.+++.+.+
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQ 161 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEE
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeee
Confidence 99999999999987543211112367999998742 346899999987764
No 25
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.9e-18 Score=162.42 Aligned_cols=116 Identities=19% Similarity=0.261 Sum_probs=98.3
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---e---eeeeeccCCCCCCeeecEEEEEecC-
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN---Y---KGTTRHFEKKTNPEWNQVFAFSKDR- 95 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~---~---~~~T~~~~~~~nP~WnE~f~f~v~~- 95 (773)
|...+++.|+ ...+.|.|+|++|+||++.|..|.+||||++++.+ . ++||+++++++||+|||+|.|.+..
T Consensus 30 G~l~~sl~y~--~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~ 107 (155)
T 2z0u_A 30 TRIQIALKYD--EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYP 107 (155)
T ss_dssp EEEEEEEEEE--TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHH
T ss_pred EEEEEEEEEc--CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHH
Confidence 4456666665 56689999999999999999999999999999965 2 7899999999999999999999853
Q ss_pred -CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEee
Q 004100 96 -IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLE 144 (773)
Q Consensus 96 -~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 144 (773)
+....|.|+|||+|.. ++++||++.++|.++... .....+||+|.
T Consensus 108 ~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~----~~~~~~W~~L~ 154 (155)
T 2z0u_A 108 ALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS----GERSTRWYNLL 154 (155)
T ss_dssp HHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT----CCCEEEEEEEB
T ss_pred HhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC----CCccccceEcc
Confidence 3357899999999998 999999999999999632 23467999986
No 26
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=8.8e-18 Score=153.37 Aligned_cols=113 Identities=29% Similarity=0.582 Sum_probs=93.3
Q ss_pred CcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeecEEEEEe-c--C
Q 004100 24 GDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSK-D--R 95 (773)
Q Consensus 24 ~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~-----~~~~~~T~~~~~~~nP~WnE~f~f~v-~--~ 95 (773)
...+++.|+ +..+.|.|+|++|+||+..+..+.+||||++++ +..+++|++++++.||+|||+|.|.+ . +
T Consensus 6 ~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 83 (129)
T 2bwq_A 6 QLSIKLWFD--KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRRE 83 (129)
T ss_dssp EEEEEEEEE--TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGG
T ss_pred EEEEEEEEc--cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHH
Confidence 345666666 556899999999999999998899999999999 34688999999999999999999995 2 3
Q ss_pred CCCceEEEEEEeCCCC-C--CeeeEEEEEEcCccCCCCCCCCCCcCeEEEee
Q 004100 96 IQSSVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLE 144 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 144 (773)
+....|.|+|||.+.. + +++||++.++|.++..+. ..+||+|+
T Consensus 84 ~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 84 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred hcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 3467999999999988 5 999999999999987542 57999984
No 27
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.4e-17 Score=156.53 Aligned_cols=118 Identities=28% Similarity=0.429 Sum_probs=100.2
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeecEEEEEecC--C
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG---NYKGTTRHFEKKTNPEWNQVFAFSKDR--I 96 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~---~~~~~T~~~~~~~nP~WnE~f~f~v~~--~ 96 (773)
.|...+++.|+ ...+.|.|+|++|+||+..+..+.+||||++++. .++++|++++++.||+|||+|.|.+.. +
T Consensus 28 ~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 105 (152)
T 1rsy_A 28 LGKLQYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 105 (152)
T ss_dssp CCEEEEEEEEE--TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHH
T ss_pred ceEEEEEEEEe--CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHc
Confidence 34456666665 5668999999999999999988999999999994 367899999999999999999998853 3
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeC
Q 004100 97 QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (773)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (773)
....|.|+|||++.+ ++++||++.++|.++..+. ...+||+|.+.
T Consensus 106 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 106 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 468899999999998 8999999999999997542 35799999864
No 28
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=154.75 Aligned_cols=118 Identities=29% Similarity=0.483 Sum_probs=100.3
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeeeeccCCCCCCeeecEEEEEec---CC
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG---NYKGTTRHFEKKTNPEWNQVFAFSKD---RI 96 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~---~~~~~T~~~~~~~nP~WnE~f~f~v~---~~ 96 (773)
|...+++.|. .+.+.|.|+|++|++|+..+..+.+||||++++. .++++|++++++.||+|||+|.|.+. +.
T Consensus 13 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~ 90 (141)
T 2d8k_A 13 GRIQFSVGYN--FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKV 90 (141)
T ss_dssp CEEEEEEEEC--SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHH
T ss_pred eEEEEEEEEe--CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHc
Confidence 4445666665 6678999999999999999988999999999995 36789999999999999999999852 23
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 97 QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
....|.|+|||++.+ ++++||++.++|.++..+. ....||+|....
T Consensus 91 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 137 (141)
T 2d8k_A 91 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSG 137 (141)
T ss_dssp TTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECC
T ss_pred ccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCC
Confidence 467899999999998 8999999999999997653 367899999865
No 29
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.4e-17 Score=156.62 Aligned_cols=106 Identities=24% Similarity=0.322 Sum_probs=93.8
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE---CCeeeeeeeccCCCCCccccEEEEEEeC---CCceEEEEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY---GQKWVRTRTIIDSPTPKWNEQYTWEVFD---PCTVITIGVF 432 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~---~~~~~~T~~~~~t~~P~wne~~~f~v~~---~~~~l~v~v~ 432 (773)
+..+.|.|+|++|+||+.+ +..+.+||||++.+ +.+.+||+++++++||.|||.|.|.+.. ....|.|+||
T Consensus 39 ~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 115 (152)
T 1rsy_A 39 FQNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 115 (152)
T ss_dssp TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCc---cCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEE
Confidence 3348999999999999987 44588999999999 4567899999999999999999998874 3679999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEe
Q 004100 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (773)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 475 (773)
|+|.++ +|++||++.|++.++..+....+||+|..
T Consensus 116 d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 116 DFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ECCCCC--------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 999876 79999999999999998888999999964
No 30
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=3.3e-17 Score=152.01 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=93.1
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC---CeeeeeeeccCCCCCccccEEEEEEeC----CCceEEEEEE
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG---QKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVF 432 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~ 432 (773)
..+.|.|.|++|+||+.+ +..|.+||||++.+. ...+||+++++++||.|||.|.|.+.. ....|.|+||
T Consensus 24 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAK---DFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp SSCCEEEEEEEEESCCCC---SSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCC---CCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 348999999999999987 445889999999993 467899999999999999999998642 2578999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEee
Q 004100 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL 476 (773)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 476 (773)
|++.++ +|++||++.|++.++..+.....||+|...
T Consensus 101 d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 101 DYDRFS--------RNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp ECCSSS--------SCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred ECCCCC--------CCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999876 799999999999999988888999999764
No 31
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=2.2e-17 Score=151.29 Aligned_cols=119 Identities=22% Similarity=0.342 Sum_probs=99.8
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-C-
Q 004100 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN--YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-K- 112 (773)
Q Consensus 37 ~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~--~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~- 112 (773)
...|+|+|++|++|+..|..|.+||||++++++ ++++|++++++.||+|||+|.|.+... +.|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 457999999999999999999999999999975 789999999999999999999999764 3599999999987 4
Q ss_pred --CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC---CceeeEEEEEEEE
Q 004100 113 --DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG---DKVRGELMLAVWM 161 (773)
Q Consensus 113 --d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~---~~~~G~i~l~~~~ 161 (773)
|++||++.+++.++..... ...+|++|....+ ....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999998843321 2358999987642 2357999998754
No 32
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=5.4e-18 Score=157.57 Aligned_cols=116 Identities=34% Similarity=0.611 Sum_probs=99.2
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeeeeccCCCCCCeeecE
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNY--------------KGTTRHFEKKTNPEWNQV 88 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~--------------~~~T~~~~~~~nP~WnE~ 88 (773)
|...+++.|+ .+.|.|+|++|+||+..+..|.+||||++++.+. +++|++++++.||+|||+
T Consensus 7 G~i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~ 82 (142)
T 1rh8_A 7 GEIQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQT 82 (142)
T ss_dssp CEEEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEE
T ss_pred eEEEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCE
Confidence 4456777777 5799999999999999998899999999999873 478999999999999999
Q ss_pred EEEE-ec--CCCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 89 FAFS-KD--RIQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 89 f~f~-v~--~~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
|.|. +. ++....|.|+|||++.. ++++||++.++|.++.... ...+||+|....
T Consensus 83 f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 83 VIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp EEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred EEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 9997 53 33467899999999998 8999999999999987542 356999998764
No 33
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.73 E-value=1.4e-17 Score=155.02 Aligned_cols=116 Identities=28% Similarity=0.446 Sum_probs=98.8
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeeeeccCCCCCCeeecEEEEEec--CCC
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM---GNYKGTTRHFEKKTNPEWNQVFAFSKD--RIQ 97 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~---~~~~~~T~~~~~~~nP~WnE~f~f~v~--~~~ 97 (773)
|...+++.|. ...+.|.|+|++|++|+..+..+.+||||++++ +.++++|++++++.||+|||+|.|.+. ++.
T Consensus 21 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 98 (143)
T 3f04_A 21 GKLQYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELG 98 (143)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHT
T ss_pred EEEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcC
Confidence 4445555555 667899999999999999988889999999999 346889999999999999999999985 334
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeee
Q 004100 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLED 145 (773)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 145 (773)
...|.|+|||++.. +|++||++.++|.++..+. ...+||+|..
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 57899999999998 9999999999999997643 3568999975
No 34
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=1.9e-17 Score=151.69 Aligned_cols=123 Identities=22% Similarity=0.266 Sum_probs=98.2
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC--eeeeeeeccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ--KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~--~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~ 439 (773)
..|+|+|++|+||+++ +..|.+||||++.+++ +.++|+++++++||.|||.|.|.+.++. .|.|+|||+|.++.
T Consensus 5 ~~L~V~v~~a~~L~~~---d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKK---DFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEESCCCC---STTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTS
T ss_pred EEEEEEEEEeECCCCC---CCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCC
Confidence 6899999999999987 4558899999999975 7899999999999999999999998764 49999999998740
Q ss_pred CCCCCCCCCCccEEEEEecCcc-ccCCeEEeeEEeEeecCCC-cccccEEEEEEEE
Q 004100 440 GDKAGGARDSRIGKVRIRLSTL-ETDRVYTHSYPLLVLYPNG-VKKMGEIHLAVRF 493 (773)
Q Consensus 440 ~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g-~~~~G~v~l~~~~ 493 (773)
...|++||.+.|++..+ ........|++|......+ .+..|+|++++..
T Consensus 81 -----~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 -----KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -----STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred -----CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 01279999999999988 3333335789997643322 2347999988864
No 35
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=6.8e-18 Score=156.72 Aligned_cols=118 Identities=28% Similarity=0.558 Sum_probs=100.1
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeecEEEEEe-c--
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSK-D-- 94 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~-----~~~~~~T~~~~~~~nP~WnE~f~f~v-~-- 94 (773)
|...+++.|. +..+.|.|+|++|+||+..+..+.+||||++++ +.++++|++++++.||+|||+|.|.+ .
T Consensus 8 G~i~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~ 85 (141)
T 1v27_A 8 GQLSIKLWFD--KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 85 (141)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTT
T ss_pred cEEEEEEEEe--CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHH
Confidence 4456666666 556899999999999999998899999999999 34688999999999999999999994 2
Q ss_pred CCCCceEEEEEEeCCCC-C--CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC
Q 004100 95 RIQSSVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (773)
Q Consensus 95 ~~~~~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (773)
++....|.|+|||++.. + +++||++.++|.++..+. ..+||+|.....
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~ 136 (141)
T 1v27_A 86 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDS 136 (141)
T ss_dssp GGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSS
T ss_pred HhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECccccc
Confidence 33458999999999988 5 999999999999987531 579999998764
No 36
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=8.5e-18 Score=157.88 Aligned_cols=105 Identities=18% Similarity=0.169 Sum_probs=91.5
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC---e---eeeeeeccCCCCCccccEEEEEEeCC---CceEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---K---WVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITI 429 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---~---~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v 429 (773)
+..+.|.|.|++|+||+++ +..|.+||||++.+.+ . .+||+++++|+||+|||.|.|.+... ...|.|
T Consensus 40 ~~~~~L~V~Vi~a~~L~~~---d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~ 116 (155)
T 2z0u_A 40 EKNKQFAILIIQLSNLSAL---LQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRV 116 (155)
T ss_dssp TTTTEEEEEEEEEECGGGT---CCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEE
T ss_pred CCCCEEEEEEEEccCcCCc---ccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEE
Confidence 3448999999999999987 5568899999999965 2 68999999999999999999998742 568999
Q ss_pred EEEeCCCCCCCCCCCCCCCCccEEEEEecCccc-cCCeEEeeEEeE
Q 004100 430 GVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-TDRVYTHSYPLL 474 (773)
Q Consensus 430 ~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~ 474 (773)
+|||+|.++ ++++||++.|+|.++. .+....+||+|.
T Consensus 117 ~V~d~d~~~--------~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 117 DVCTTDRSH--------LEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEECTTS--------CEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEEECCCCC--------CCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999876 8999999999999995 467778999984
No 37
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.72 E-value=7.1e-18 Score=157.88 Aligned_cols=122 Identities=16% Similarity=0.259 Sum_probs=102.6
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC-----
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG----- 395 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~----- 395 (773)
...|+|.+++.. .+..+.|.|.|++|+||+.++. ..+.+||||++.++
T Consensus 7 ~~~G~l~~sl~y-------------------------~~~~~~L~V~v~~a~~L~~~d~--~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKY-------------------------EQQTQSLVVHVKECHQLAYADE--AKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEE-------------------------ETTTTEEEEEEEEEESCCCSBT--TTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEE-------------------------eCCCCEEEEEEEEecCCCCccc--CCCCCCeEEEEEEEcCCcc
Confidence 457899888874 2334899999999999998741 35789999999995
Q ss_pred CeeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEE
Q 004100 396 QKWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (773)
Q Consensus 396 ~~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 472 (773)
....+|+++++++||.|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..+.....||+
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~ 131 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG--------RNTFLGEAEIQMDSWKLDKKLDHCLP 131 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG--------CEEEEEEEEEEHHHHHHHCCSEEEEE
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc--------CCcEEEEEEEEcccccccCCccceEE
Confidence 2468999999999999999999998753 457999999999876 79999999999999987777889999
Q ss_pred eEeec
Q 004100 473 LLVLY 477 (773)
Q Consensus 473 L~~~~ 477 (773)
|....
T Consensus 132 L~~~~ 136 (148)
T 3fdw_A 132 LHGKI 136 (148)
T ss_dssp CBCC-
T ss_pred CcCcc
Confidence 97643
No 38
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=6.2e-17 Score=149.39 Aligned_cols=116 Identities=20% Similarity=0.338 Sum_probs=96.5
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC----eeeeeeccCCCCCCeeecEEEEEecC--
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN----YKGTTRHFEKKTNPEWNQVFAFSKDR-- 95 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~----~~~~T~~~~~~~nP~WnE~f~f~v~~-- 95 (773)
.|...+++.|+ ...+.|.|+|++|++ .|..|.+||||++.+.+ .+++|++++++.||+|||+|.|.+..
T Consensus 12 ~G~l~~sl~y~--~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 12 APKLHYCLDYD--CQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CCEEEEEEEEE--TTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred ceEEEEEEEEe--CCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 45566777776 556799999999994 56788999999999942 36899999999999999999999853
Q ss_pred CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 96 IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
+....|.|+|||+|.+ +|++||++.++|.++..+. ...+|++|....
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 134 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTSG 134 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCCS
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcc-----cccceeeCcCCC
Confidence 3467899999999998 9999999999999996432 367999998864
No 39
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.6e-17 Score=150.22 Aligned_cols=102 Identities=23% Similarity=0.374 Sum_probs=85.1
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCeeeeeeeccCCCCCccccEEEEEEeC----CCceEEEE
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIG 430 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~ 430 (773)
..+.|.|.|++|+||+.+ +..|.+||||++.+ +....+|+++++++||.|||.|.|.+.. ....|.|+
T Consensus 16 ~~~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp TTTEEEEEEEEEESCCCC---TTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred CCCEEEEEEEEeeCCCCC---CCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 348999999999999987 45588999999999 4567999999999999999999999643 25799999
Q ss_pred EEeCCCCCCCCCCCCCC--CCccEEEEEecCccccCCeEEeeEEe
Q 004100 431 VFDNCHLHGGDKAGGAR--DSRIGKVRIRLSTLETDRVYTHSYPL 473 (773)
Q Consensus 431 v~d~~~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~L 473 (773)
|||+|.++ + |++||++.|++.++.... ..+||+|
T Consensus 93 V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVR--------EEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC---------------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCc--------CcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 99999875 4 899999999999987655 7899998
No 40
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.72 E-value=2.3e-17 Score=153.50 Aligned_cols=105 Identities=23% Similarity=0.321 Sum_probs=93.3
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE---CCeeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY---GQKWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVF 432 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~---~~~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~ 432 (773)
+..+.|.|.|++|+||+.++ ..+.+||||++.+ +.+..+|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d---~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~ 107 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALD---MGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVY 107 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBG---GGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCCC---CCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEE
Confidence 34489999999999999874 4478999999999 55679999999999999999999998743 579999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeE
Q 004100 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (773)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 474 (773)
|+|.++ +|++||++.|+|.++..+....+||+|.
T Consensus 108 d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 108 DFDRFS--------KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred eCCCCC--------CCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999876 7999999999999999998899999995
No 41
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=2.9e-17 Score=151.62 Aligned_cols=115 Identities=33% Similarity=0.543 Sum_probs=98.7
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeecEEEEEecCC-
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSKDRI- 96 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~-----~~~~~~T~~~~~~~nP~WnE~f~f~v~~~- 96 (773)
|...+++.| ..+.|.|+|++|++|+..+..+.+||||++++ +..+++|++++++.||.|||+|.|.+...
T Consensus 5 G~l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~ 80 (137)
T 3rdl_A 5 GRIYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSD 80 (137)
T ss_dssp CEEEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred eEEEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchh
Confidence 445677666 34799999999999999998899999999999 45688999999999999999999998542
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 97 QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
....|.|+|||++.. +|++||++.++|.++..+. ..+||+|.+..
T Consensus 81 ~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 81 KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 245899999999988 8999999999999997542 57999998764
No 42
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=4.4e-17 Score=155.88 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=101.0
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeCCCceEEEEEEeCCCCC
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLH 438 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~ 438 (773)
...+.|+|+|++|++|+..+ ..+.+||||++.++++.+||+++++++||+|||.|.|.+. +...|.|+|||+|.++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~---~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKK---NWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK 108 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC-----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS
T ss_pred CCceEEEEEEEEeECCCCcc---cCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC
Confidence 34589999999999998432 2244999999999999999999999999999999999985 5889999999999876
Q ss_pred CCCCCCCCCCCccEEEEEecCccccC-----CeEEeeEEeEeecCCCcccccEEEEEEEEee
Q 004100 439 GGDKAGGARDSRIGKVRIRLSTLETD-----RVYTHSYPLLVLYPNGVKKMGEIHLAVRFTC 495 (773)
Q Consensus 439 ~~~~~~~~~d~~lG~~~i~l~~l~~~-----~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~ 495 (773)
+|++||++.|++.++..+ .....|++|..... +.+..|+|.+.+.+.+
T Consensus 109 --------~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 --------SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGLQ 161 (173)
T ss_dssp --------CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESEE
T ss_pred --------CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeeee
Confidence 799999999999998532 12367999987532 3345699998887643
No 43
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=4.6e-17 Score=153.16 Aligned_cols=117 Identities=23% Similarity=0.418 Sum_probs=97.7
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEe--cC
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSK--DR 95 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v--~~ 95 (773)
|...+++.|. ...+.|.|+|++|+||+..+ .+.+||||++.+.+ .+++|++++++.||+|||+|.|.+ .+
T Consensus 14 G~~~lsL~y~--~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 90 (153)
T 3fbk_A 14 GAGQLRLSID--AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED 90 (153)
T ss_dssp CCCEEEEEEE--ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG
T ss_pred CEEEEEEEEE--CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH
Confidence 4456777776 55679999999999999998 68999999999943 578999999999999999999998 44
Q ss_pred CCCceEEEEEEeCCCC-C-CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 96 IQSSVLEVTVKDKDFV-K-DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~-d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
.. ..|.|+|||.+.. + |++||++.++|.++... .....+||+|.+..
T Consensus 91 ~~-~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~----~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 91 DQ-KRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTP----DKEISGWYYLLGEH 139 (153)
T ss_dssp TT-SEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC------CCEEEEEECBCTT
T ss_pred hC-CEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCC----CCccccEEECCChh
Confidence 43 4599999999997 5 99999999999999742 12357899999875
No 44
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=4.6e-17 Score=151.04 Aligned_cols=119 Identities=19% Similarity=0.350 Sum_probs=99.8
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----C
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----G 395 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~ 395 (773)
...|+|.+++.+. +..+.|.|.|++|+||+.+ +..+.+||||++.+ +
T Consensus 5 ~~~G~i~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---SSSCCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEe-------------------------CCCCEEEEEEEEccCCCCc---CCCCCCCCEEEEEEecCCCC
Confidence 3478898888742 3348999999999999987 45588999999998 4
Q ss_pred CeeeeeeeccCCCCCccccEEEEEEeC----CCceEEEEEEeCCCCCCCCCCCCCC--CCccEEEEEecCccccCCeEEe
Q 004100 396 QKWVRTRTIIDSPTPKWNEQYTWEVFD----PCTVITIGVFDNCHLHGGDKAGGAR--DSRIGKVRIRLSTLETDRVYTH 469 (773)
Q Consensus 396 ~~~~~T~~~~~t~~P~wne~~~f~v~~----~~~~l~v~v~d~~~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~ 469 (773)
...+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ + |++||++.|+|.++.... ..+
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~--------~~~~~~lG~~~i~l~~l~~~~-~~~ 127 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR--------EEESEFLGEILIELETALLDD-EPH 127 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS--------SCCBCCCEEEEEEGGGCCCSS-EEE
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc--------CCCCceEEEEEEEccccCCCC-CCc
Confidence 567899999999999999999999542 2579999999999875 4 899999999999987655 789
Q ss_pred eEEeEee
Q 004100 470 SYPLLVL 476 (773)
Q Consensus 470 ~~~L~~~ 476 (773)
||+|...
T Consensus 128 W~~L~~~ 134 (141)
T 1v27_A 128 WYKLQTH 134 (141)
T ss_dssp EEECBCC
T ss_pred eEECccc
Confidence 9999764
No 45
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=4.4e-17 Score=149.53 Aligned_cols=103 Identities=14% Similarity=0.239 Sum_probs=91.3
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCeeeeeeeccCCCCCccccEEEEE-EeC---CCceEEEEE
Q 004100 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWE-VFD---PCTVITIGV 431 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~-v~~---~~~~l~v~v 431 (773)
.+.|.|.|++|+||+. +..|.+||||++.+ +....||+++++++||.|||+|.|. +.. ....|.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3899999999999985 34578999999998 4467899999999999999999999 653 357999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEe
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 475 (773)
||+|.++ +|++||++.|+|.++..+.....||+|..
T Consensus 95 ~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLR--------ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSS--------CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCC--------CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999876 78999999999999998888899999965
No 46
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=155.49 Aligned_cols=119 Identities=17% Similarity=0.239 Sum_probs=98.8
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCC-CCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecCC
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKD-VTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRI 96 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d-~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~~ 96 (773)
|...+++.|. +..+.|.|+|++|+||+..+ ..+.+||||++.+.+ .+++|++++++.||+|||+|.|.+...
T Consensus 10 G~l~~sl~y~--~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 87 (148)
T 3fdw_A 10 GRIAFSLKYE--QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPES 87 (148)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCST
T ss_pred eEEEEEEEEe--CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChh
Confidence 3345555555 66789999999999999888 578999999999973 478999999999999999999998542
Q ss_pred --CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC
Q 004100 97 --QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (773)
Q Consensus 97 --~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (773)
....|.|+|||.+.. ++++||++.++|.++..+. ...+||+|..+.+
T Consensus 88 ~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 88 LLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK-----KLDHCLPLHGKIS 137 (148)
T ss_dssp TGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC-----CSEEEEECBCC--
T ss_pred HhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccC-----CccceEECcCccc
Confidence 356799999999998 8999999999999997653 2569999998753
No 47
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=3.8e-17 Score=151.82 Aligned_cols=121 Identities=17% Similarity=0.228 Sum_probs=99.2
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---- 396 (773)
...|+|++++... +..+.|.|.|++|+||+.+ +..| +||||++.+.+
T Consensus 8 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g-~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 8 SPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAF---SEDG-SDPYVRMYLLPDKRR 58 (142)
T ss_dssp CSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCS---STTC-CCEEEEEEEESCCCS
T ss_pred CCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCC-CCeeEEEEEEcCCCC
Confidence 4578998888742 3348999999999999987 4457 99999999932
Q ss_pred -eeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEE
Q 004100 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (773)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 472 (773)
..++|+++++++||+|||.|.|.+... ...|.|+|||++.++ ...|++||++.|+|.++..+....+||+
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~~~iG~~~i~l~~~~~~~~~~~W~~ 132 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL------SKDKGLLGKVLVALASEELAKGWTQWYD 132 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS------CCSCCCCEEEEEECCCSTTTTCBCCBCC
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc------ccCCcEEEEEEEecccccccccccceee
Confidence 568999999999999999999998642 459999999999764 0024799999999999988777889999
Q ss_pred eEee
Q 004100 473 LLVL 476 (773)
Q Consensus 473 L~~~ 476 (773)
|...
T Consensus 133 L~~~ 136 (142)
T 2dmg_A 133 LTED 136 (142)
T ss_dssp CBCS
T ss_pred ccCC
Confidence 9753
No 48
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=1.1e-16 Score=147.72 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=98.1
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC---C-
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG---Q- 396 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~---~- 396 (773)
...|+|++++... ...+.|.|.|++|++ + +..|.+||||++.+. +
T Consensus 10 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~~ 58 (138)
T 1wfm_A 10 NQAPKLHYCLDYD-------------------------CQKAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTGS 58 (138)
T ss_dssp SSCCEEEEEEEEE-------------------------TTTTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEe-------------------------CCCCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCCc
Confidence 3468888888742 334899999999994 3 566889999999993 2
Q ss_pred eeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEe
Q 004100 397 KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPL 473 (773)
Q Consensus 397 ~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L 473 (773)
...+|+++++++||+|||.|.|.+... ...|.|+|||+|.++ +|++||++.|+|.++..+.....||+|
T Consensus 59 ~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~--------~dd~lG~~~i~l~~l~~~~~~~~W~~L 130 (138)
T 1wfm_A 59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS--------RHSVAGELRLGLDGTSVPLGAAQWGEL 130 (138)
T ss_dssp EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC--------TTSCSEEEEEESSSSSSCTTCCEEEEC
T ss_pred ccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC--------CCcEEEEEEEEcccccCcccccceeeC
Confidence 358999999999999999999998753 568999999999876 899999999999999877777899999
Q ss_pred Eee
Q 004100 474 LVL 476 (773)
Q Consensus 474 ~~~ 476 (773)
...
T Consensus 131 ~~~ 133 (138)
T 1wfm_A 131 KTS 133 (138)
T ss_dssp CCC
T ss_pred cCC
Confidence 753
No 49
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=4.1e-17 Score=153.56 Aligned_cols=105 Identities=26% Similarity=0.389 Sum_probs=90.5
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCeeeeeeeccCCCCCccccEEEEEEe--CCCceEEEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVF--DPCTVITIGV 431 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~--~~~~~l~v~v 431 (773)
+..+.|.|.|++|+||+.++ .|.+||||++.+ +....+|+++++++||.|||.|.|.+. +....|.|+|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d----~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ----PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS----SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCC----CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 34489999999999999873 378999999998 235689999999999999999999984 4556799999
Q ss_pred EeCCCCCCCCCCCCCC-CCccEEEEEecCcccc-CCeEEeeEEeEe
Q 004100 432 FDNCHLHGGDKAGGAR-DSRIGKVRIRLSTLET-DRVYTHSYPLLV 475 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~ 475 (773)
||+|.++ + |++||++.|++.++.. +.....||+|..
T Consensus 100 ~d~d~~~--------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 100 WNRASQS--------RQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EECCSSG--------GGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EeCCCCC--------CCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 9999865 5 8999999999999985 788899999976
No 50
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=9e-17 Score=148.45 Aligned_cols=119 Identities=24% Similarity=0.315 Sum_probs=97.7
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeeeeccCCCCCCeeecEEEEE-ec--C
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVT-GSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFS-KD--R 95 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~-~~~dpyv~v~~~~---~~~~T~~~~~~~nP~WnE~f~f~-v~--~ 95 (773)
|...+++.|+ ...+.|.|+|++|+||+..+.. +.+||||++++.+ ++++|++++++.||+|||+|.|. +. +
T Consensus 9 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~ 86 (138)
T 1ugk_A 9 GTLFFSLEYN--FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQ 86 (138)
T ss_dssp CEEEEEEEEE--GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTT
T ss_pred EEEEEEEEEE--CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHH
Confidence 3345555555 6678999999999999999974 8999999999964 68999999999999999999995 53 2
Q ss_pred CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 96 IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
+....|.|+|||++.+ +|++||++.++|.++..... ....|++|....
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~~~ 135 (138)
T 1ugk_A 87 IQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG----KMLMNREIISGP 135 (138)
T ss_dssp GGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBSSS
T ss_pred hccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC----cchhhhhhhcCC
Confidence 3457899999999988 89999999999999976531 234578887654
No 51
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=4.3e-17 Score=156.32 Aligned_cols=105 Identities=18% Similarity=0.264 Sum_probs=92.1
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----eeeeeeeccCCCCCccccEEEEEEeCCCceEEEEEE-eCC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDSPTPKWNEQYTWEVFDPCTVITIGVF-DNC 435 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~-d~~ 435 (773)
+.|.|.|++|+||+.+|. ..|.+||||++.+++ ..+||+++++++||+|||+|.|.+......|.|+|| |+|
T Consensus 30 ~~L~V~v~~a~~L~~~d~--~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPG--SKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC-----CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCc--CCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 799999999999998732 257899999999853 378999999999999999999998766789999999 999
Q ss_pred CCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEee
Q 004100 436 HLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL 476 (773)
Q Consensus 436 ~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 476 (773)
.++ +|++||.+.|+|.++..+....+||+|...
T Consensus 108 ~~~--------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMD--------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTC--------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCC--------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 876 789999999999999988889999999754
No 52
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.70 E-value=7e-17 Score=149.02 Aligned_cols=103 Identities=25% Similarity=0.423 Sum_probs=91.4
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCeeeeeeeccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVFDP--CTVITIGVFDN 434 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~~--~~~l~v~v~d~ 434 (773)
|.|.|.|++|+||+.+ +..|.+||||++.+ +....+|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPM---DPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCC---STTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 7999999999999987 45588999999999 56679999999999999999999998753 45899999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEee
Q 004100 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVL 476 (773)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 476 (773)
+.++ +|++||.+.|+|+++..+. ..+||+|...
T Consensus 93 d~~~--------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT--------RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS--------CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC--------CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9876 7999999999999997765 7899999753
No 53
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.3e-16 Score=147.43 Aligned_cols=119 Identities=20% Similarity=0.253 Sum_probs=97.8
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCC-CCCCCcEEEEEEC---C
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDG-RGTTDAYCVAKYG---Q 396 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~-~~~~dpyv~v~~~---~ 396 (773)
...|+|.+++.. .+..+.|.|.|++|+||+.+ +. .+.+||||++.++ .
T Consensus 6 ~~~G~l~~~l~y-------------------------~~~~~~L~v~v~~a~~L~~~---d~~~~~~dpyv~v~~~~~~~ 57 (138)
T 1ugk_A 6 SGLGTLFFSLEY-------------------------NFERKAFVVNIKEARGLPAM---DEQSMTSDPYIKMTILPEKK 57 (138)
T ss_dssp CCCCEEEEEEEE-------------------------EGGGTEEEEEEEEEESCCCC---BTTTTBCEEEEEEEEETTTC
T ss_pred CccEEEEEEEEE-------------------------ECCCCEEEEEEEEeeCCCCC---CCCCCCCCCEEEEEEecCCC
Confidence 347888888864 23348999999999999987 44 3789999999995 3
Q ss_pred eeeeeeeccCCCCCccccEEEEE-EeC---CCceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCC-eEEeeE
Q 004100 397 KWVRTRTIIDSPTPKWNEQYTWE-VFD---PCTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDR-VYTHSY 471 (773)
Q Consensus 397 ~~~~T~~~~~t~~P~wne~~~f~-v~~---~~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~ 471 (773)
+.+||+++++++||.|||.|.|. +.. ....|.|+|||+|.++ +|++||++.|+|.++..+. ....|+
T Consensus 58 ~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~~~~ 129 (138)
T 1ugk_A 58 HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFS--------RDDIIGEVLIPLSGIELSEGKMLMNR 129 (138)
T ss_dssp SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSC--------CCCCCEEEEEECTTCCCTTCCEEEEE
T ss_pred ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCC--------CCcEEEEEEEehhHccCCCCcchhhh
Confidence 67999999999999999999996 553 2469999999999876 7899999999999997654 445678
Q ss_pred EeEe
Q 004100 472 PLLV 475 (773)
Q Consensus 472 ~L~~ 475 (773)
+|..
T Consensus 130 ~l~~ 133 (138)
T 1ugk_A 130 EIIS 133 (138)
T ss_dssp ECBS
T ss_pred hhhc
Confidence 8854
No 54
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=8.1e-17 Score=150.84 Aligned_cols=115 Identities=32% Similarity=0.543 Sum_probs=97.4
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecCC-
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDRI- 96 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~~- 96 (773)
|...+++.|. .+.|.|+|++|+||+..+..+.+||||++++.+ .+++|++++++.||+|||+|.|.+...
T Consensus 20 G~l~~~l~~~----~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (149)
T 1a25_A 20 GRIYIQAHID----REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESD 95 (149)
T ss_dssp CEEEEEEEES----SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGG
T ss_pred eEEEEEEEec----CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecccc
Confidence 3445555553 468999999999999999889999999999973 578999999999999999999998643
Q ss_pred CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 97 QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 97 ~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
....|.|+|||++.. +|++||++.++|.++..+ ...+||+|....
T Consensus 96 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~------~~~~W~~L~~~~ 141 (149)
T 1a25_A 96 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA------GVDGWFKLLSQE 141 (149)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC------CEEEEEECBCHH
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC------ccCCeEEccCCC
Confidence 246899999999998 899999999999999754 257899998753
No 55
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=6.3e-17 Score=155.12 Aligned_cols=116 Identities=27% Similarity=0.348 Sum_probs=98.1
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecC
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDV-TGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR 95 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~-~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~ 95 (773)
.|...++..| ..+.|.|+|++|+||+..|. .+.+||||++++.+ .+++|++++++.||+|||+|.|.+..
T Consensus 18 ~G~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (171)
T 2q3x_A 18 MGDIQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP 93 (171)
T ss_dssp CCEEEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC
T ss_pred ccEEEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC
Confidence 3445666666 46799999999999999985 68999999999864 37899999999999999999999854
Q ss_pred CCCceEEEEEE-eCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 96 IQSSVLEVTVK-DKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 96 ~~~~~l~i~V~-d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
....|.|+|| |++.+ +|++||++.++|.++..+. ...+||+|....
T Consensus 94 -~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 94 -QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp -TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred -CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 4689999999 99988 8999999999999997543 367999998865
No 56
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=1.9e-16 Score=150.13 Aligned_cols=119 Identities=24% Similarity=0.299 Sum_probs=99.7
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---- 396 (773)
...|+|++++.+ .+..|.|.|.|++|+||+.+ +..|.+||||++.+++
T Consensus 9 ~~~G~l~~~l~y-------------------------~~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRY-------------------------VPTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEE-------------------------ETTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEE-------------------------cCCCCEEEEEEEEeeCCCCc---cCCCCCCeEEEEEEEeCCce
Confidence 457999888874 23448999999999999987 4558899999999952
Q ss_pred -eeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCcc-----------
Q 004100 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTL----------- 461 (773)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l----------- 461 (773)
...+|+++++++||.|||.|.|.+... ...|.|+|||+|.++ +|++||.+.|++..+
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~w~~l~ 132 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG--------KNDAIGKVFVGYNSTGAELRHWSDML 132 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS--------CCEEEEEEEEETTCCHHHHHHHHHHH
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC--------CCceEEEEEECCCCCCcHHHHHHHHH
Confidence 468999999999999999999998754 468999999999876 799999999999954
Q ss_pred -ccCCeEEeeEEeEe
Q 004100 462 -ETDRVYTHSYPLLV 475 (773)
Q Consensus 462 -~~~~~~~~~~~L~~ 475 (773)
..++...+||+|..
T Consensus 133 ~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 133 ANPRRPIAQWHTLQV 147 (159)
T ss_dssp HSTTCCEEEEEECBC
T ss_pred HCCCCeeeeEEECcC
Confidence 34567889999965
No 57
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=149.71 Aligned_cols=122 Identities=17% Similarity=0.182 Sum_probs=100.5
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCC-ccC---CCCCCCCcEEEEEEC-
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPM-KTK---DGRGTTDAYCVAKYG- 395 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~~~~dpyv~v~~~- 395 (773)
...|+|.+++.+ .+..+.|.|.|++|+||+.. +.. +..+.+||||++.+.
T Consensus 10 ~~~G~l~~~l~y-------------------------~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQY-------------------------DLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEE-------------------------ETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEE-------------------------cCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 457899888874 23448999999999999973 331 123589999999995
Q ss_pred --CeeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEee
Q 004100 396 --QKWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHS 470 (773)
Q Consensus 396 --~~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~ 470 (773)
.+.+||+++++++||+|||.|.|.+... ...|+|+|||+|.++ +|++||++.|+|.++..+.....|
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~--------~~~~iG~~~i~l~~l~~~~~~~~w 136 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS--------RHCVIGKVSVPLCEVDLVKGGHWW 136 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC--------CSCCCEEEEEETTTSCTTTCCCEE
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc--------CCcEEEEEEEechhcCCCCCccEE
Confidence 3578999999999999999999998642 468999999999876 789999999999999877666789
Q ss_pred EEeEe
Q 004100 471 YPLLV 475 (773)
Q Consensus 471 ~~L~~ 475 (773)
++|..
T Consensus 137 ~~L~~ 141 (147)
T 2enp_A 137 KALIP 141 (147)
T ss_dssp ECCBC
T ss_pred EEeec
Confidence 99864
No 58
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=2.9e-17 Score=152.57 Aligned_cols=103 Identities=25% Similarity=0.365 Sum_probs=90.5
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCe--------------eeeeeeccCCCCCccccEEEEE-EeC---C
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQK--------------WVRTRTIIDSPTPKWNEQYTWE-VFD---P 423 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~--------------~~~T~~~~~t~~P~wne~~~f~-v~~---~ 423 (773)
|.|.|.|++|+||+.+ +..|.+||||++.+++. ..||+++++++||.|||.|.|. +.. .
T Consensus 18 ~~L~V~v~~a~~L~~~---d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~ 94 (142)
T 1rh8_A 18 GNLIIHILQARNLVPR---DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLM 94 (142)
T ss_dssp TEEEEEEEEEESCCCC---SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHT
T ss_pred CEEEEEEEEecCCCCC---CCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHcc
Confidence 7999999999999987 45588999999999763 4799999999999999999997 442 3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEe
Q 004100 424 CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (773)
Q Consensus 424 ~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 475 (773)
...|.|+|||+|.++ +|++||.+.|+|.++..+.....||+|..
T Consensus 95 ~~~l~i~V~d~d~~~--------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 95 KKTLEVTVWDYDRFS--------SNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp TCEEEEEEEEECSSS--------CEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred CCEEEEEEEECCCCC--------CCceEEEEEEeccccccCCCCCeEEECCc
Confidence 679999999999876 78999999999999987777789999965
No 59
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.69 E-value=7.9e-17 Score=149.63 Aligned_cols=118 Identities=25% Similarity=0.451 Sum_probs=98.6
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEE-ecC
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFS-KDR 95 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~-v~~ 95 (773)
.|...+++.|+ +..+.|.|+|++|++|+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|. +..
T Consensus 15 ~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 92 (142)
T 2chd_A 15 LGALEFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE 92 (142)
T ss_dssp CCEEEEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred cceEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH
Confidence 34456666666 67789999999999999999889999999999975 68899999999999999999998 532
Q ss_pred --CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeC
Q 004100 96 --IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (773)
Q Consensus 96 --~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (773)
+....|.|+|||++.. +|++||++.++|.++..+. ....|++|..+
T Consensus 93 ~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~p 141 (142)
T 2chd_A 93 EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ-----RKNFNICLERV 141 (142)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBCC
T ss_pred HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC-----ccEEEEecccC
Confidence 2246899999999998 8999999999999998653 24567777653
No 60
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=6.5e-17 Score=150.21 Aligned_cols=118 Identities=29% Similarity=0.370 Sum_probs=97.8
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecC--
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR-- 95 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~-- 95 (773)
|...+++.|. +..+.|.|+|++|+||+..+..+ +||||++++.+ .+++|++++++.||+|||+|.|.+..
T Consensus 11 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 87 (142)
T 2dmg_A 11 GQIQLTIRHS--SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPE 87 (142)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHH
T ss_pred ceEEEEEEEe--CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHH
Confidence 4456666665 66789999999999999999888 99999999943 57899999999999999999999842
Q ss_pred CCCceEEEEEEeCCCC-C--CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCC
Q 004100 96 IQSSVLEVTVKDKDFV-K--DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKG 148 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 148 (773)
+....|.|+|||++.+ + +++||++.++|.++.... ...+||+|....+
T Consensus 88 l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 88 VQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSG 138 (142)
T ss_dssp HHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCS
T ss_pred hCcCEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCC
Confidence 2346899999999986 3 479999999999987643 3678999998653
No 61
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.69 E-value=9.9e-17 Score=148.98 Aligned_cols=104 Identities=26% Similarity=0.434 Sum_probs=90.7
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----eeeeeeeccCCCCCccccEEEEE-EeCC---CceEEEE
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDSPTPKWNEQYTWE-VFDP---CTVITIG 430 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~f~-v~~~---~~~l~v~ 430 (773)
..+.|.|.|++|+||+.+ +..|.+||||++.+++ ..+||+++++++||.|||.|.|. +... ...|.|+
T Consensus 27 ~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPM---DSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp GGTEEEEEEEEEESCCCC---CTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEecCCCCC---CCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 348999999999999987 4568899999999965 67899999999999999999998 5432 3689999
Q ss_pred EEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeE
Q 004100 431 VFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (773)
Q Consensus 431 v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 474 (773)
|||++.++ +|++||++.|++.++..++....|++|.
T Consensus 104 V~d~d~~~--------~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 104 VCDEDKFG--------HNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEECTTS--------CEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEECCCCC--------CCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 99999876 7899999999999999888778888874
No 62
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=1.8e-16 Score=150.19 Aligned_cols=120 Identities=29% Similarity=0.378 Sum_probs=97.2
Q ss_pred cCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecC--
Q 004100 23 TGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR-- 95 (773)
Q Consensus 23 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~-- 95 (773)
|...+++.|. +..+.|.|+|++|+||+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|.+..
T Consensus 12 G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 89 (159)
T 1tjx_A 12 GDICFSLRYV--PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQ 89 (159)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred CeEEEEEEEc--CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHH
Confidence 3345555554 66789999999999999999889999999999963 47899999999999999999999853
Q ss_pred CCCceEEEEEEeCCCC-CCeeeEEEEEEcCcc----------CCCCCCCCCCcCeEEEeeeCC
Q 004100 96 IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEI----------PKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 96 ~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 147 (773)
+....|.|+|||++.. +|++||.+.+++..+ .... .....+||+|....
T Consensus 90 l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 90 IQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred hCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 3356899999999998 899999999999864 2111 23456899988653
No 63
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.68 E-value=2e-16 Score=146.13 Aligned_cols=93 Identities=27% Similarity=0.344 Sum_probs=81.1
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----eeeeeeeccCCCCCccccEEEEEEeCCC---ceEEEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDSPTPKWNEQYTWEVFDPC---TVITIG 430 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~wne~~~f~v~~~~---~~l~v~ 430 (773)
+..+.|.|.|++|+||+.+ +..|.+||||++.+++ ...+|+++++++||.|||.|.|.+.... ..|.|+
T Consensus 13 ~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~ 89 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAM---DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIIT 89 (138)
T ss_dssp TTTTEEEEEEEEEESCCCC---BTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCc---CCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEE
Confidence 3448999999999999987 4458899999999964 4689999999999999999999987543 689999
Q ss_pred EEeCCCCCCCCCCCCCCCCccEEEEEecCccc
Q 004100 431 VFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE 462 (773)
Q Consensus 431 v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~ 462 (773)
|||+|.++ +|++||++.|++.++.
T Consensus 90 V~d~~~~~--------~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 90 VMDKDKLS--------RNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEECCSSS--------CCEEEEEEEESSSSCH
T ss_pred EEECCCCC--------CCcEEEEEEEccccCC
Confidence 99999876 7999999999999763
No 64
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=1.6e-16 Score=148.80 Aligned_cols=102 Identities=25% Similarity=0.409 Sum_probs=90.5
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEEC-----CeeeeeeeccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYG-----QKWVRTRTIIDSPTPKWNEQYTWEVFDP--CTVITIGVFDN 434 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~wne~~~f~v~~~--~~~l~v~v~d~ 434 (773)
+.|.|.|++|+||+.+ +..+.+||||++.++ ...+||+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCC---STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 6899999999999987 455889999999996 3578999999999999999999999764 46899999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEe
Q 004100 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (773)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 475 (773)
|.++ +|++||.+.|++.++..+ ...+||+|..
T Consensus 108 d~~~--------~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 108 DLTS--------RNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp CSSS--------CCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCC--------CCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 9876 799999999999999876 4789999965
No 65
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=3.4e-16 Score=149.41 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=98.3
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC----
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ---- 396 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~---- 396 (773)
...|+|.+++.+ .+..+.|.|.|++|+||+.+ +..|.+||||++.+++
T Consensus 21 ~~~G~l~~~l~y-------------------------~~~~~~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 21 EERGKILVSLMY-------------------------STQQGGLIVGIIRCVHLAAM---DANGYSDPFVKLWLKPDMGK 72 (166)
T ss_dssp CCCCEEEEEEEE-------------------------ETTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETC---
T ss_pred CccceEEEEEEE-------------------------ECCCCEEEEEEEEeECCCCc---cCCCCCCcEEEEEEECCCCc
Confidence 457888888874 23348999999999999987 4458899999999965
Q ss_pred -eeeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccc----------
Q 004100 397 -KWVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE---------- 462 (773)
Q Consensus 397 -~~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~---------- 462 (773)
..+||+++++++||.|||.|.|.+... ...|.|+|||+|.++ +|++||.+.|++.++.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~--------~~~~iG~~~i~l~~~~~~~~~W~~l~ 144 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK--------SNDYIGGCQLGISAKGERLKHWYECL 144 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS--------CCEEEEEEEEETTCCHHHHHHHHHHH
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC--------CCcEEEeEEEecccCCchhHHHHHHH
Confidence 578999999999999999999999753 569999999999876 7899999999999863
Q ss_pred --cCCeEEeeEEeEe
Q 004100 463 --TDRVYTHSYPLLV 475 (773)
Q Consensus 463 --~~~~~~~~~~L~~ 475 (773)
.++....|++|..
T Consensus 145 ~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 145 KNKDKKIERWHQLQN 159 (166)
T ss_dssp HCTTCCEEEEEECBC
T ss_pred hCCCCcceEeeECCC
Confidence 3455666666644
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=2.2e-16 Score=150.69 Aligned_cols=101 Identities=24% Similarity=0.395 Sum_probs=88.3
Q ss_pred cceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecC--CC
Q 004100 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQ 97 (773)
Q Consensus 25 ~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~--~~ 97 (773)
..+++.|. +..+.|.|+|++|+||+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|.+.. +.
T Consensus 26 l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 103 (166)
T 2cm5_A 26 ILVSLMYS--TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLA 103 (166)
T ss_dssp EEEEEEEE--TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred EEEEEEEE--CCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcC
Confidence 44555554 67789999999999999999889999999999976 57899999999999999999999853 33
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEcCccC
Q 004100 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIP 127 (773)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~ 127 (773)
...|.|+|||++.. ++++||++.+++.++.
T Consensus 104 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 104 KKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred CCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 57899999999998 8999999999999863
No 67
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=1.7e-16 Score=146.66 Aligned_cols=114 Identities=27% Similarity=0.493 Sum_probs=93.3
Q ss_pred cceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeeeeccCCCCCCeeecEEEEEecC--CC
Q 004100 25 DKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-----YKGTTRHFEKKTNPEWNQVFAFSKDR--IQ 97 (773)
Q Consensus 25 ~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-----~~~~T~~~~~~~nP~WnE~f~f~v~~--~~ 97 (773)
..+++.|. +..+.|.|+|++|+||+..+..|.+||||++++.+ .+++|++++++.||+|||+|.|.+.. +.
T Consensus 5 l~~sl~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~ 82 (138)
T 3n5a_A 5 LLLSLCYN--PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLR 82 (138)
T ss_dssp EEEEEEEE--TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGG
T ss_pred EEEEEEEc--CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcC
Confidence 45555555 66789999999999999999889999999999974 47899999999999999999999853 23
Q ss_pred CceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 98 SSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 98 ~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
...|.|+|||.+.. +|++||++.+++.++..+ ..+|++|....
T Consensus 83 ~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~-------~~~W~~l~~~~ 126 (138)
T 3n5a_A 83 ETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGE-------VKHWKDMIARP 126 (138)
T ss_dssp GEEEEEEEEECCSSSCCEEEEEEEESSSSCHHH-------HHHHHHHHHST
T ss_pred ceEEEEEEEECCCCCCCcEEEEEEEccccCChH-------HHHHHHHHhCC
Confidence 47899999999998 899999999999875422 33555555443
No 68
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=3.7e-16 Score=147.07 Aligned_cols=117 Identities=25% Similarity=0.350 Sum_probs=88.5
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--Ce---eeeeeccCCCCCCeeecEEEEEecCC
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMG--NY---KGTTRHFEKKTNPEWNQVFAFSKDRI 96 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~--~~---~~~T~~~~~~~nP~WnE~f~f~v~~~ 96 (773)
.|...+++.|. +..+.|.|+|++|+||+..+..+.+||||++++. +. +++|++++++.||+|||+|.|.+...
T Consensus 16 ~G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 16 RGELLVSLCYQ--STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp CCEEEEEEEEE--TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred ccEEEEEEEEc--CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 34445555555 6678999999999999999988999999999994 32 67999999999999999999998543
Q ss_pred --CCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 97 --QSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 97 --~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
....|.|+|||++.+ ++++||++.+++.+.. ....+|++|....
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~-------~~~~~W~~l~~~p 140 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATAEG-------SGGGHWKEICDFP 140 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCS-------HHHHHHHHHHHST
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCc-------hHHHHHHHHHhCC
Confidence 357899999999988 8999999999998721 1234566665543
No 69
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.4e-16 Score=148.89 Aligned_cols=119 Identities=25% Similarity=0.322 Sum_probs=97.2
Q ss_pred ccCcceeeeecccCceeEEEEEEEEeecCCCC-CC------CCCCCcEEEEEECC---eeeeeeccCCCCCCeeecEEEE
Q 004100 22 ITGDKLTSTYDLVEQMQYLYVRVVKAKDLPPK-DV------TGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAF 91 (773)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~-d~------~~~~dpyv~v~~~~---~~~~T~~~~~~~nP~WnE~f~f 91 (773)
.|...+++.|+ +..+.|.|+|++|+||+.. +. .+.+||||++++.+ ++++|++++++.||+|||+|.|
T Consensus 12 ~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f 89 (147)
T 2enp_A 12 LGMLHFSTQYD--LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTF 89 (147)
T ss_dssp CCEEEEEEEEE--TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEE
T ss_pred ceEEEEEEEEc--CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEE
Confidence 44456666665 5668999999999999984 43 35899999999973 5789999999999999999999
Q ss_pred EecC--CCCceEEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 92 SKDR--IQSSVLEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 92 ~v~~--~~~~~l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
.+.. +....|.|+|||++.+ ++++||++.++|.++.... ....|+.|....
T Consensus 90 ~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~~ 143 (147)
T 2enp_A 90 EIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-----GGHWWKALIPSG 143 (147)
T ss_dssp CCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-----CCCEEECCBCCC
T ss_pred EeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-----CccEEEEeecCC
Confidence 9853 2346899999999988 8999999999999997542 246899998653
No 70
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.66 E-value=8.5e-16 Score=144.58 Aligned_cols=116 Identities=18% Similarity=0.238 Sum_probs=88.6
Q ss_pred ceeeEEEEEEEEccCcccCCCCCccCCCCCccccccccCccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCe-
Q 004100 321 KFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQK- 397 (773)
Q Consensus 321 ~~~G~l~l~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~- 397 (773)
...|+|.+++.. .+..+.|.|.|++|+||+.+ +..|.+||||++.+ ++.
T Consensus 14 ~~~G~l~~~l~y-------------------------~~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~ 65 (153)
T 1w15_A 14 SGRGELLVSLCY-------------------------QSTTNTLTVVVLKARHLPKS---DVSGLSDPYVKVNLYHAKKR 65 (153)
T ss_dssp --CCEEEEEEEE-------------------------ETTTTEEEEEEEEEESCC---------CCCEEEEEEEEETTEE
T ss_pred ccccEEEEEEEE-------------------------cCCCCEEEEEEEEeECCCCc---CCCCCCCeEEEEEEEeCCeE
Confidence 457888888764 23348999999999999987 44578999999999 443
Q ss_pred --eeeeeeccCCCCCccccEEEEEEeCC---CceEEEEEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEE
Q 004100 398 --WVRTRTIIDSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYP 472 (773)
Q Consensus 398 --~~~T~~~~~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~ 472 (773)
.+||+++++++||.|||+|.|.+... ...|.|+|||+|.++ +|++||++.|++++. +....+||+
T Consensus 66 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~--------~~~~lG~~~i~l~~~--~~~~~~W~~ 135 (153)
T 1w15_A 66 ISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGS--------RNEVIGRLVLGATAE--GSGGGHWKE 135 (153)
T ss_dssp EEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTS--------CCEEEEEEEESTTCC--SHHHHHHHH
T ss_pred eceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCC--------CCcEEEEEEECCCCC--chHHHHHHH
Confidence 57999999999999999999998764 368999999999876 789999999999983 222344555
Q ss_pred eE
Q 004100 473 LL 474 (773)
Q Consensus 473 L~ 474 (773)
|.
T Consensus 136 l~ 137 (153)
T 1w15_A 136 IC 137 (153)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 71
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=6.9e-16 Score=137.58 Aligned_cols=116 Identities=16% Similarity=0.232 Sum_probs=101.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeecEEEEEecC--CCCceEEEEEEeCCCC-CCe
Q 004100 39 YLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDR--IQSSVLEVTVKDKDFV-KDD 114 (773)
Q Consensus 39 ~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~-~~~nP~WnE~f~f~v~~--~~~~~l~i~V~d~~~~-~d~ 114 (773)
-|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||+|||.|.|++.. ..++.|.|.|+|++++ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 4999999999998 4789999999999999999997 79999999999999843 3478999999999999 999
Q ss_pred eeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEecc
Q 004100 115 FMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGTQ 164 (773)
Q Consensus 115 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~~ 164 (773)
+||++.++|+++..... ...+-+|.+.+++...++|.+.+.|.+.
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCccccEEEEEEEecCC
Confidence 99999999999997642 2346788888887778999999999864
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=2.4e-15 Score=136.96 Aligned_cols=87 Identities=29% Similarity=0.391 Sum_probs=73.7
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004100 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (773)
Q Consensus 36 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~-~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (773)
.++.|.|+|++|+++.. .|.+||||+++ .+..+|+++. ++.||+|||+|.|.+.+. ...|.|+|||+| . +|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCC
Confidence 36799999999998853 57899999999 3444566664 699999999999999764 567999999999 7 99
Q ss_pred eeeEEEEEEcCccCCC
Q 004100 114 DFMGRVLFDLNEIPKR 129 (773)
Q Consensus 114 ~~lG~~~i~l~~l~~~ 129 (773)
++||++.|+|.++...
T Consensus 76 d~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEGGGSCBC
T ss_pred CeEEEEEEEHHHhhhc
Confidence 9999999999998754
No 73
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=1.5e-15 Score=138.22 Aligned_cols=86 Identities=23% Similarity=0.388 Sum_probs=74.3
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeecc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCCC
Q 004100 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLHG 439 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~~ 439 (773)
.+.|.|+|++|++|+. .|.+||||+++ ++..+|++++ +++||.|||.|.|.+.++...|.|+|||+| ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4899999999998842 36799999999 4455676665 699999999999999988889999999999 65
Q ss_pred CCCCCCCCCCccEEEEEecCcccc
Q 004100 440 GDKAGGARDSRIGKVRIRLSTLET 463 (773)
Q Consensus 440 ~~~~~~~~d~~lG~~~i~l~~l~~ 463 (773)
+|++||++.|+|+++..
T Consensus 74 -------~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 74 -------WDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp -------CEEEEEEEEEEGGGSCB
T ss_pred -------CCCeEEEEEEEHHHhhh
Confidence 79999999999999854
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=3.5e-15 Score=133.00 Aligned_cols=119 Identities=16% Similarity=0.250 Sum_probs=103.5
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeecc-CCCCCccccEEEEEEeCC---CceEEEEEEeCCCC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDP---CTVITIGVFDNCHL 437 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~---~~~l~v~v~d~~~~ 437 (773)
-.|+|.|.+|.||+ |++|||+++.+.+.+++|+++. .+.||+|||.|.|++..+ ...|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 47899999999997 5799999999999999999998 599999999999999854 78999999999998
Q ss_pred CCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcccccEEEEEEEEeecch
Q 004100 438 HGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCSSL 498 (773)
Q Consensus 438 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~~~~ 498 (773)
+ ++.+||++.|+|.++..+.....+-+|.+.+.+ .-.++|.+.++|.|+.+
T Consensus 93 ~--------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 93 F--------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAADG 143 (144)
T ss_dssp S--------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEETTC
T ss_pred c--------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCCCC
Confidence 7 899999999999999888777778888775432 23488999999987653
No 75
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=5.9e-15 Score=139.89 Aligned_cols=119 Identities=21% Similarity=0.257 Sum_probs=89.3
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccC-CCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004100 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFE-KKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (773)
Q Consensus 36 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~-~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (773)
.++.|.|+|++|++++ ..+.+||||+++ .+..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+| . +|
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCC
Confidence 4679999999999884 257899999999 4455677775 699999999999999864 467999999999 6 99
Q ss_pred eeeEEEEEEcCccCCCCCCCC--CCcCeEEEeeeCCCC------ceeeEEEEEEEEe
Q 004100 114 DFMGRVLFDLNEIPKRVPPDS--PLAPQWYRLEDRKGD------KVRGELMLAVWMG 162 (773)
Q Consensus 114 ~~lG~~~i~l~~l~~~~~~~~--~~~~~w~~L~~~~~~------~~~G~i~l~~~~~ 162 (773)
++||++.|+|.++..... +. ...+.|+++....|+ ...|.+++.+++.
T Consensus 85 d~iG~~~i~L~~l~~~~~-~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSNE-EGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEEGGGSCBCSS-CCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhcccCc-CCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 999999999999875431 11 123345555544332 2345677777664
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=1e-14 Score=138.32 Aligned_cols=118 Identities=21% Similarity=0.323 Sum_probs=89.2
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeecc-CCCCCccccEEEEEEeCCCceEEEEEEeCCCCC
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTII-DSPTPKWNEQYTWEVFDPCTVITIGVFDNCHLH 438 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~~~ 438 (773)
..+.|.|+|++|++|+. .|.+||||+++ ++..||++++ +++||.|||.|.|.+.+....|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 35899999999998842 36799999999 4456787776 699999999999999988889999999999 65
Q ss_pred CCCCCCCCCCCccEEEEEecCccccCC------eEEeeEEeEeecCC--Cc--ccccEEEEEEEEe
Q 004100 439 GGDKAGGARDSRIGKVRIRLSTLETDR------VYTHSYPLLVLYPN--GV--KKMGEIHLAVRFT 494 (773)
Q Consensus 439 ~~~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~~--g~--~~~G~v~l~~~~~ 494 (773)
+|++||++.|+|.++.... +...||.+...+.+ |. ...|.+.+.++|.
T Consensus 83 --------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 83 --------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp --------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred --------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 7999999999999985432 34455665432211 11 1135566777763
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=1.3e-14 Score=164.82 Aligned_cols=119 Identities=26% Similarity=0.440 Sum_probs=102.7
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeCC-CceEEEEEEeCCCC
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDP-CTVITIGVFDNCHL 437 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~-~~~l~v~v~d~~~~ 437 (773)
...|.|.|.|++|+||++. |..|.+||||++.+++..++|+++++++||.|||.|.|.+..+ ...|+|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCC---CCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4568999999999999887 5568899999999999999999999999999999999999876 47899999999987
Q ss_pred CCCCCCCCCCCCccEEEEEecCccccCCe----EEeeEEeEeecCCCcccccEEEEEEEEe
Q 004100 438 HGGDKAGGARDSRIGKVRIRLSTLETDRV----YTHSYPLLVLYPNGVKKMGEIHLAVRFT 494 (773)
Q Consensus 438 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~v~l~~~~~ 494 (773)
+ +|++||++.+++.++..+.. ...|++|.. +..|+|++++.+.
T Consensus 461 ~--------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S--------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------VPTGEVWVRFDLQ 507 (510)
T ss_dssp S--------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------SSSCEEEEEEEEE
T ss_pred C--------CCCceEEEEEEHHHhccccCCCCceeeeecCCC------CCCceEEEEEEEE
Confidence 6 89999999999999976543 678999853 2459999888773
No 78
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.54 E-value=4.2e-14 Score=157.87 Aligned_cols=114 Identities=18% Similarity=0.290 Sum_probs=97.1
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCeeeeeeeccCCCCCccccEEEEEEeC--CCceEEEEEEeCCC
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFD--PCTVITIGVFDNCH 436 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~--~~~~l~v~v~d~~~ 436 (773)
...|.|+|.|++|+||+. |..|.+||||+|+++++.+||+++++++||+|||.|.|.+.+ ....|+|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 446899999999999986 345789999999999999999999999999999999998753 57899999999998
Q ss_pred CCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcccccEEEEEEEEeecc
Q 004100 437 LHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVKKMGEIHLAVRFTCSS 497 (773)
Q Consensus 437 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~~~~~ 497 (773)
.+ +||+||.+.++|.. | ....|++| +.|.|++.+.+++..
T Consensus 467 ~~--------~dD~LG~~~~~L~~---g-~~~~~~~l---------~~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 467 GW--------DDDLLGSCDRSPHS---G-FHEVTCEL---------NHGRVKFSYHAKCLP 506 (540)
T ss_dssp SS--------CCEEEEEEEECCCS---E-EEEEEEEC---------SSSEEEEEEEEEECT
T ss_pred CC--------CCCEEEEEEEEeeC---C-cEEEEEEc---------CCeEEEEEEEEEECC
Confidence 76 78999999999983 3 35678876 238999888876643
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=1.8e-14 Score=163.56 Aligned_cols=123 Identities=27% Similarity=0.416 Sum_probs=105.0
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCC-CC
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV-KD 113 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~-~d 113 (773)
...+.|.|+|++|+||++.|..|.+||||++.+++++++|++++++.||+|||+|.|.+.......|.|+|||.|.+ +|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 46689999999999999999999999999999999999999999999999999999999877778899999999998 89
Q ss_pred eeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEe
Q 004100 114 DFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (773)
Q Consensus 114 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (773)
++||++.++|.++..+.... .....|++|.... .|+|.+++.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~-~~~~~~~~l~~~~----~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESK-GPMTRRLLLHEVP----TGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHH-CSCCEEEECBSSS----SCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCC-CceeeeecCCCCC----CceEEEEEEEE
Confidence 99999999999998643211 1256899987653 58888887653
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.52 E-value=5.2e-14 Score=157.16 Aligned_cols=112 Identities=22% Similarity=0.284 Sum_probs=95.4
Q ss_pred CceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeeeeccCCCCCCeeecEEEEEec-CCCCceEEEEEEeCCCC-C
Q 004100 35 EQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNYKGTTRHFEKKTNPEWNQVFAFSKD-RIQSSVLEVTVKDKDFV-K 112 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~T~~~~~~~nP~WnE~f~f~v~-~~~~~~l~i~V~d~~~~-~ 112 (773)
..++.|+|+|++|+||+. |..|.+||||+|++++++++|+++++++||+|||+|.|.+. ......|.|+|||.|.. +
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 458899999999999998 88899999999999999999999999999999999999863 23578899999999998 8
Q ss_pred CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEec
Q 004100 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMGT 163 (773)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~~ 163 (773)
||+||++.++|.. + ....|++|. .|+|++++.+..
T Consensus 470 dD~LG~~~~~L~~---g------~~~~~~~l~-------~G~l~~~~~~~c 504 (540)
T 3nsj_A 470 DDLLGSCDRSPHS---G------FHEVTCELN-------HGRVKFSYHAKC 504 (540)
T ss_dssp CEEEEEEEECCCS---E------EEEEEEECS-------SSEEEEEEEEEE
T ss_pred CCEEEEEEEEeeC---C------cEEEEEEcC-------CeEEEEEEEEEE
Confidence 8999999999872 2 134687754 278888876543
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.8e-13 Score=156.42 Aligned_cols=119 Identities=23% Similarity=0.387 Sum_probs=103.0
Q ss_pred ceeEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeeeeccCCC-CCCeeecEEEEEecCCCCceEEEEEEe
Q 004100 36 QMQYLYVRVVKAKDLPPKDV--TGSCDPYVEVKMGN-----YKGTTRHFEKK-TNPEWNQVFAFSKDRIQSSVLEVTVKD 107 (773)
Q Consensus 36 ~~~~L~V~v~~a~~L~~~d~--~~~~dpyv~v~~~~-----~~~~T~~~~~~-~nP~WnE~f~f~v~~~~~~~l~i~V~d 107 (773)
..+.|.|+|++|++|+..+. .+.+||||+|.+.+ .+++|++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 55789999999999998873 68899999999954 57899999887 999999999999976555789999999
Q ss_pred CCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCc-eeeEEEEEEEEe
Q 004100 108 KDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDK-VRGELMLAVWMG 162 (773)
Q Consensus 108 ~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~~ 162 (773)
.|.+ +|++||++.++|..|..+ .+|++|.+..|+. ..|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9988 999999999999999754 3799999988876 357888888663
No 82
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.44 E-value=8.5e-15 Score=163.33 Aligned_cols=121 Identities=20% Similarity=0.343 Sum_probs=21.2
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCe-eeeeeeccCC---CCCccccEEEEEEeCCCceEEEEEEeC-
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQK-WVRTRTIIDS---PTPKWNEQYTWEVFDPCTVITIGVFDN- 434 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~-~~~T~~~~~t---~~P~wne~~~f~v~~~~~~l~v~v~d~- 434 (773)
..+.|+|+|++|+||+++ + ||||++.++++ +.||+++++| +||.|||.|.|.+......|.|+|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~---d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPK---K-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDS 80 (483)
T ss_dssp EEECC-----------------------------------------------------CCEECC----------------
T ss_pred eccEEEEEEEEcCCcCCC---C-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecC
Confidence 347899999999999875 2 99999999886 6799999999 999999999999766678999999994
Q ss_pred CC---CCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecC---------------------CCcccccEEEEE
Q 004100 435 CH---LHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYP---------------------NGVKKMGEIHLA 490 (773)
Q Consensus 435 ~~---~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~v~l~ 490 (773)
|. .+ +|++||++.|++.++..+....+||+|..... +|.+..|.|+|+
T Consensus 81 d~~~~~~--------~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~ 152 (483)
T 3bxj_A 81 DKKRKKD--------KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLK 152 (483)
T ss_dssp ----------------------------------CCEECC--------------------------------------CE
T ss_pred CccccCC--------CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEE
Confidence 42 33 78999999999999998888899999965443 122346899999
Q ss_pred EEEeec
Q 004100 491 VRFTCS 496 (773)
Q Consensus 491 ~~~~~~ 496 (773)
++|.+.
T Consensus 153 v~~~~~ 158 (483)
T 3bxj_A 153 ARYQTM 158 (483)
T ss_dssp EEEEEC
T ss_pred EEeeee
Confidence 998654
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.43 E-value=5.1e-13 Score=152.73 Aligned_cols=120 Identities=18% Similarity=0.283 Sum_probs=98.9
Q ss_pred ccceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-----eeeeeeeccCC-CCCccccEEEEEEeCC-CceEEEEEE
Q 004100 360 SIGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-----KWVRTRTIIDS-PTPKWNEQYTWEVFDP-CTVITIGVF 432 (773)
Q Consensus 360 ~~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-----~~~~T~~~~~t-~~P~wne~~~f~v~~~-~~~l~v~v~ 432 (773)
..+.|+|+|++|++|+..+. ...+.+||||+|.+.+ ...||++++++ +||+|||+|.|.+..+ ...|+|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 45899999999999998742 1257899999999944 57899999997 9999999999999876 478999999
Q ss_pred eCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcc-cccEEEEEEEE
Q 004100 433 DNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRF 493 (773)
Q Consensus 433 d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~v~l~~~~ 493 (773)
|+|.++ +|++||++.|+|..+..|. +|+||.+. .|.. ..|.|.+.++|
T Consensus 574 D~D~~~--------~dd~iG~~~ipl~~L~~G~---r~v~L~d~--~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 574 DYDSSS--------KNDFIGQSTIPWNSLKQGY---RHVHLLSK--NGDQHPSATLFVKISI 622 (624)
T ss_dssp ECCSSS--------CCEEEEEEEEEGGGBCCEE---EEEEEECT--TSCEEEEEEEEEEEEE
T ss_pred EcCCCC--------CCceeEEEEEEHHHcCCCc---EEEeCCCC--CcCCCCceEEEEEEEE
Confidence 999876 7999999999999998763 59999764 3332 34677777766
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.42 E-value=2.3e-13 Score=156.41 Aligned_cols=107 Identities=28% Similarity=0.481 Sum_probs=94.8
Q ss_pred CceeEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeeeeccCCCCCCeeecEEEEEecCCCCceEEEEEEeC
Q 004100 35 EQMQYLYVRVVKAKDLPP---KDVTGSCDPYVEVKMGN---YKGTTRHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDK 108 (773)
Q Consensus 35 ~~~~~L~V~v~~a~~L~~---~d~~~~~dpyv~v~~~~---~~~~T~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~ 108 (773)
.+.+.|.|+|++|++|+. .|..|.+||||++++++ .+++|++++++.||+|||+|.|.+.......|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 457899999999999998 77778999999999985 678999999999999999999999876678999999999
Q ss_pred CCCCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeC
Q 004100 109 DFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDR 146 (773)
Q Consensus 109 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 146 (773)
|.++|++||++.++|.++..+. ....|++|...
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~-----~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV 127 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTC-----CCCEEEEETTT
T ss_pred CCCCCceeEEEEEEHHHcCCCC-----ceEEEEecCCC
Confidence 9877999999999999997543 35689999754
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.37 E-value=4.4e-13 Score=154.12 Aligned_cols=104 Identities=18% Similarity=0.244 Sum_probs=92.8
Q ss_pred CccceEEEEEEEccCCCC---CccCCCCCCCCcEEEEEECC---eeeeeeeccCCCCCccccEEEEEEeC-CCceEEEEE
Q 004100 359 SSIGVLELGILNAQGLMP---MKTKDGRGTTDAYCVAKYGQ---KWVRTRTIIDSPTPKWNEQYTWEVFD-PCTVITIGV 431 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~---~~~~~~~~~~dpyv~v~~~~---~~~~T~~~~~t~~P~wne~~~f~v~~-~~~~l~v~v 431 (773)
.+.|.|+|.|++|+||+. + |..|.+||||++.+++ ..+||+++++++||+|||.|.|.+.. ....|+|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~---D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFG---DMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHH---HHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCcccc---CCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 456999999999999997 5 3457899999999984 67899999999999999999999987 467999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeE
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLL 474 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 474 (773)
||+|.+ .|++||++.|+|.++..+.....|++|.
T Consensus 92 ~D~D~~---------~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 92 MDANYV---------MDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp EECCSS---------SCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred EECCCC---------CCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 999886 2889999999999999888888999994
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.27 E-value=3.5e-13 Score=150.30 Aligned_cols=100 Identities=21% Similarity=0.388 Sum_probs=13.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeeeeccCCC---CCCeeecEEEEEecCCCCceEEEEEEeC-C--
Q 004100 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNY-KGTTRHFEKK---TNPEWNQVFAFSKDRIQSSVLEVTVKDK-D-- 109 (773)
Q Consensus 37 ~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~T~~~~~~---~nP~WnE~f~f~v~~~~~~~l~i~V~d~-~-- 109 (773)
.+.|+|+|++|++|+++| ||||++.++++ ..||++++++ .||+|||+|.|.+... ...|.|+|||. |
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 467999999999999876 99999999985 6799999998 9999999999986433 57899999994 4
Q ss_pred -CC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 110 -FV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 110 -~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
.. +|++||++.|++.++..+. ...+||+|.+..
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~ 118 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCC
Confidence 24 8999999999999998643 357899996543
No 87
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.17 E-value=1.7e-10 Score=134.17 Aligned_cols=112 Identities=19% Similarity=0.307 Sum_probs=94.1
Q ss_pred eeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeeeeccCC-CCCCeeecE-EEEE-ecCCCCceEEEEEE
Q 004100 37 MQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN-------YKGTTRHFEK-KTNPEWNQV-FAFS-KDRIQSSVLEVTVK 106 (773)
Q Consensus 37 ~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~-------~~~~T~~~~~-~~nP~WnE~-f~f~-v~~~~~~~l~i~V~ 106 (773)
.+.|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+|||+ |.|. +..+.-..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 36899999999999853 589999999975 5679999975 699999998 9998 75544578999999
Q ss_pred eCCCCCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCcee-eEEEEEEEEec
Q 004100 107 DKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVR-GELMLAVWMGT 163 (773)
Q Consensus 107 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~-G~i~l~~~~~~ 163 (773)
|.+ +++||++.++|..|..+ .++++|.+..|+... +.|.+.+.+..
T Consensus 725 D~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 78999999999999754 368999999887654 89999887763
No 88
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=135.42 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=93.2
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeeeccCC-CCCCeeec-EEEEE-ecCCCCceEEEEEEeC
Q 004100 38 QYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTRHFEK-KTNPEWNQ-VFAFS-KDRIQSSVLEVTVKDK 108 (773)
Q Consensus 38 ~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~------~~~~T~~~~~-~~nP~WnE-~f~f~-v~~~~~~~l~i~V~d~ 108 (773)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++.+ +.||+||| +|.|. +..+....|+|+|||.
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4799999999999853 589999999975 2579999965 69999999 69998 6544456899999998
Q ss_pred CCCCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCc-eeeEEEEEEEEec
Q 004100 109 DFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDK-VRGELMLAVWMGT 163 (773)
Q Consensus 109 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~~~~~~ 163 (773)
| +++||++.++|..|..+ .++++|.+..|+. ..|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999999754 3689999998876 5689999988764
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.16 E-value=6e-11 Score=138.54 Aligned_cols=113 Identities=32% Similarity=0.577 Sum_probs=95.2
Q ss_pred eeeeecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeeeeccCCCCCCeeecEEEEEecCC-CCce
Q 004100 27 LTSTYDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM-----GNYKGTTRHFEKKTNPEWNQVFAFSKDRI-QSSV 100 (773)
Q Consensus 27 ~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~-----~~~~~~T~~~~~~~nP~WnE~f~f~v~~~-~~~~ 100 (773)
+...+.+. .+.|.|+|++|++|.+.|..|.+||||++++ ...+++|+++++++||.|||+|.|.+... ....
T Consensus 163 i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~ 240 (674)
T 3pfq_A 163 IYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRR 240 (674)
T ss_dssp EEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCE
T ss_pred ccccceec--cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccce
Confidence 34444433 4689999999999999999999999999999 33678999999999999999999998532 3456
Q ss_pred EEEEEEeCCCC-CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCC
Q 004100 101 LEVTVKDKDFV-KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRK 147 (773)
Q Consensus 101 l~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 147 (773)
|.|+|||.|.. +|++||++.+++.++.... ...|+.|....
T Consensus 241 L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 241 LSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp EEEEEEECCSSSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred eeeEEeecccccccccccccccchhhhccCC------cccceeecccc
Confidence 99999999998 9999999999999997542 47899998765
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.12 E-value=3.3e-10 Score=132.65 Aligned_cols=112 Identities=21% Similarity=0.296 Sum_probs=91.3
Q ss_pred ceeEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeeee-ccC-CCCCCeeec-EEEE-EecCCCCceEEEEE
Q 004100 36 QMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGN------YKGTTR-HFE-KKTNPEWNQ-VFAF-SKDRIQSSVLEVTV 105 (773)
Q Consensus 36 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~------~~~~T~-~~~-~~~nP~WnE-~f~f-~v~~~~~~~l~i~V 105 (773)
..+.|.|+|++|++|+. +.+||||+|.+.+ .+++|+ +++ ++.||+||| +|.| .+..+.-..|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 35789999999999984 4689999999943 357899 885 569999999 6999 77554456899999
Q ss_pred EeCCCCCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCce-eeEEEEEEEEe
Q 004100 106 KDKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKV-RGELMLAVWMG 162 (773)
Q Consensus 106 ~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~-~G~i~l~~~~~ 162 (773)
||.+ +++||++.++|..|..+ .+|++|.+..|... .+.|.+.+.+.
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 9986 79999999999999753 47899999887753 47888877653
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.11 E-value=8.6e-11 Score=137.25 Aligned_cols=102 Identities=25% Similarity=0.444 Sum_probs=90.3
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE-----CCeeeeeeeccCCCCCccccEEEEEEeCC--CceEEEEEEeC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY-----GQKWVRTRTIIDSPTPKWNEQYTWEVFDP--CTVITIGVFDN 434 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~wne~~~f~v~~~--~~~l~v~v~d~ 434 (773)
+.|.|.|++|++|+++ |..|.+||||++.+ +..+.+|+++++++||.|||.|.|.+... ...|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~---d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCC---STTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCC---CcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 7899999999999988 55689999999998 44568999999999999999999998753 56799999999
Q ss_pred CCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEe
Q 004100 435 CHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLV 475 (773)
Q Consensus 435 ~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 475 (773)
|..+ +|++||.+.++++++..+. ...|++|.+
T Consensus 249 d~~~--------~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 249 DLTS--------RNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp CSSS--------CCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccc--------ccccccccccchhhhccCC-cccceeecc
Confidence 9876 8999999999999998765 488999975
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=1.1e-09 Score=127.49 Aligned_cols=110 Identities=20% Similarity=0.279 Sum_probs=88.2
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC-------eeeeeeeccC-CCCCccccE-EEEE-EeCC-CceEEE
Q 004100 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ-------KWVRTRTIID-SPTPKWNEQ-YTWE-VFDP-CTVITI 429 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~-------~~~~T~~~~~-t~~P~wne~-~~f~-v~~~-~~~l~v 429 (773)
.+.|+|+|++|++|+. ..+||||+|.+.+ +++||+++++ ++||+|||+ |.|. |..+ ...|+|
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 4789999999999974 2589999999965 5679999987 599999998 9998 7655 468999
Q ss_pred EEEeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcc-cccEEEEEEEEe
Q 004100 430 GVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRFT 494 (773)
Q Consensus 430 ~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~v~l~~~~~ 494 (773)
.|||++ +++||++.|+|+.|..|- +++||.+. .|.. ..+.|.+.+.+.
T Consensus 722 ~V~D~d------------ddfiG~~~ipL~~L~~Gy---R~vpL~~~--~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEEN------------GKFIGHRVMPLDGIKPGY---RHVPLRNE--SNRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEEETT------------SCEEEEEEEESTTCCCEE---EEEEEECT--TSCEEEEEEEEEEEEEE
T ss_pred EEEecC------------CCeeeEEEEEHHHcCCcc---eEEEEeCC--CCCCCCceEEEEEEEEE
Confidence 999973 689999999999998873 57899764 3332 236777777664
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.03 E-value=7.9e-10 Score=129.23 Aligned_cols=109 Identities=18% Similarity=0.247 Sum_probs=87.7
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECC------eeeeeeeccC-CCCCcccc-EEEEE-EeCC-CceEEEEE
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQ------KWVRTRTIID-SPTPKWNE-QYTWE-VFDP-CTVITIGV 431 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~------~~~~T~~~~~-t~~P~wne-~~~f~-v~~~-~~~l~v~v 431 (773)
..|.|+|++|++|+. ..+||||+|.+.+ .++||+++++ ++||+||| .|.|. |..+ ...|+|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 489999999999974 2589999999954 2479999987 59999999 69998 6655 46899999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCccccCCeEEeeEEeEeecCCCcc-cccEEEEEEEEe
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTLETDRVYTHSYPLLVLYPNGVK-KMGEIHLAVRFT 494 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~v~l~~~~~ 494 (773)
||+| +++||++.|+|+.|..|- +++||.+. .|.. ..|.|.+.+.+.
T Consensus 798 ~D~d------------ddfiG~~~lpL~~L~~Gy---R~vpL~~~--~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 798 FEEG------------GKFVGHRILPVSAIRSGY---HYVCLRNE--ANQPLCLPALLIYTEAS 844 (885)
T ss_dssp EETT------------TEEEEEEEEETTTCCCEE---EEEEEECT--TSCEEEEEEEEEEEEEE
T ss_pred EcCC------------ccEEeeEEEEHHHcCCCc---eEEEecCC--CCCccCceEEEEEEEEE
Confidence 9974 589999999999998763 46888764 3332 357888888775
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.94 E-value=4.8e-09 Score=122.87 Aligned_cols=113 Identities=22% Similarity=0.331 Sum_probs=87.9
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------EEEEee-cccCCCCCccccc-eEEE-EeeCCCCCeEEEEE
Q 004100 198 KLWYLRVNVIEAQDLQPTDKGRFPEVYVKAQLGN------QALRTR-VSASRTINPMWNE-DLMF-VAAEPFEEHLILTV 268 (773)
Q Consensus 198 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~------~~~kT~-~~~~~t~nP~wne-~f~f-~~~~~~~~~l~i~V 268 (773)
..+.|+|+|++|++|+. +.+||||+|.+.+ +++||+ ++++++.||.||| .|.| .+..+.-..|.|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 35789999999999985 3589999999942 368999 8876579999999 6999 88766666899999
Q ss_pred EEccCCCCCceeEEEEEeccccccccCCCCCCceEEEcccCcccccccccCCceeeEEEEEEEE
Q 004100 269 EDRVAPNKDEVLGKCMIPLQYVDKRLDHKPVNTRWYNLEKHIVVEGEKKKDTKFASRIHMRICL 332 (773)
Q Consensus 269 ~d~~~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~w~~L~~~~~~~~~~~~~~~~~G~l~l~i~~ 332 (773)
+|++ +++||++.++|+.|.. ..+|++|.+.. + .....+.|.+.+.+
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~-------G~r~v~L~~~~---g----~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNS-------GYHHLCLHSES---N----MPLTMPALFIFLEM 797 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCC-------EEEEEEEECTT---C----CEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCC-------CcEEEeccCCC---C----CCCCceEEEEEEEE
Confidence 9985 7999999999999863 35688887652 1 11224666666654
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.74 E-value=5e-08 Score=84.25 Aligned_cols=114 Identities=16% Similarity=0.271 Sum_probs=85.4
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----eeee-eccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCCC
Q 004100 38 QYLYVRVVKAKDLPPKDVTGSCDPYVEVKMGNY----KGTT-RHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFVK 112 (773)
Q Consensus 38 ~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~~~~----~~~T-~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~~ 112 (773)
..|+|.+.++.--.........||||.|.+... ..+| .+.++|..|.|||+|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 478898877764332223346899999999763 2355 677889999999999999886 6889999997654
Q ss_pred CeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEe
Q 004100 113 DDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (773)
Q Consensus 113 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (773)
++++.+++.+.+|..+-........-|++|+. .|.|++.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP------QAKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS------SCEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEEEe
Confidence 89999999999998541001234678999986 48888887654
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.72 E-value=1.5e-07 Score=81.29 Aligned_cols=108 Identities=13% Similarity=0.245 Sum_probs=83.0
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCee----eee-eeccCCCCCccccEEEEEEeCCCceEEEEEEeCCC
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNCH 436 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~----~~T-~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~~ 436 (773)
+.|+|.+.++.--..+ ......||||.|.+.... .+| .++++|..|.|||+|.-.|.+ ...|.|.||+.
T Consensus 6 ~flRi~~~~~~~~~~~---~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~-- 79 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQ---AEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRA-- 79 (126)
T ss_dssp CEEEEEEEEEECSSCC---CSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEE--
T ss_pred ccEEeeeccccccccC---CccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcC--
Confidence 5777877666532211 112358999999886543 365 778889999999999999876 68899999975
Q ss_pred CCCCCCCCCCCCCccEEEEEecCccc-----cCCeEEeeEEeEeecCCCcccccEEEEEEEE
Q 004100 437 LHGGDKAGGARDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLYPNGVKKMGEIHLAVRF 493 (773)
Q Consensus 437 ~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~ 493 (773)
.-++++.+.|++.+|. .+...+.|..|. ..|+|++.+++
T Consensus 80 ----------a~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~ 123 (126)
T 1yrk_A 80 ----------AEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQY 123 (126)
T ss_dssp ----------TTEEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEE
T ss_pred ----------CCCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEE
Confidence 2389999999999996 466788899983 36999999886
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.68 E-value=1.5e-07 Score=82.29 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=85.2
Q ss_pred cceEEEEEEEccCCCCCccCCCCCCCCcEEEEEECCee----eee-eeccCCCCCccccEEEEEEeCCCceEEEEEEeCC
Q 004100 361 IGVLELGILNAQGLMPMKTKDGRGTTDAYCVAKYGQKW----VRT-RTIIDSPTPKWNEQYTWEVFDPCTVITIGVFDNC 435 (773)
Q Consensus 361 ~g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~~~~~----~~T-~~~~~t~~P~wne~~~f~v~~~~~~l~v~v~d~~ 435 (773)
.+.|+|.+.++.-.+.+. -.....||||.|.+.... .+| .++++|..|.|||+|.-.|.+ ...|.|.||+.
T Consensus 9 ~~flRi~l~~~~~~~~~~--~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~- 84 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQS--CQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGK- 84 (138)
T ss_dssp CCCEEEEEEEEECCCCCC--SCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECS-
T ss_pred CcceEEEeeccccCCCCC--cccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcC-
Confidence 367888887776433210 012469999999886542 677 777889999999999998876 68899999964
Q ss_pred CCCCCCCCCCCCCCccEEEEEecCccc-----cCCeEEeeEEeEeecCCCcccccEEEEEEEE
Q 004100 436 HLHGGDKAGGARDSRIGKVRIRLSTLE-----TDRVYTHSYPLLVLYPNGVKKMGEIHLAVRF 493 (773)
Q Consensus 436 ~~~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~~~~L~~~~~~g~~~~G~v~l~~~~ 493 (773)
.-++++.+.|++.+|. .+...+.|..|. ..|+|++.+++
T Consensus 85 -----------a~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~ 128 (138)
T 2enj_A 85 -----------NVDLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARY 128 (138)
T ss_dssp -----------SCSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEE
T ss_pred -----------CCCeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEE
Confidence 2389999999999996 456778899983 36999999988
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.66 E-value=5.3e-08 Score=85.17 Aligned_cols=114 Identities=17% Similarity=0.379 Sum_probs=86.4
Q ss_pred eEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----eeee-eccCCCCCCeeecEEEEEecCCCCceEEEEEEeCCCC
Q 004100 38 QYLYVRVVKAKDLPPKD-VTGSCDPYVEVKMGNY----KGTT-RHFEKKTNPEWNQVFAFSKDRIQSSVLEVTVKDKDFV 111 (773)
Q Consensus 38 ~~L~V~v~~a~~L~~~d-~~~~~dpyv~v~~~~~----~~~T-~~~~~~~nP~WnE~f~f~v~~~~~~~l~i~V~d~~~~ 111 (773)
+.|+|.+.+..-.+... .....||||.|.+... ..+| .+.++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 46889888876544332 2346899999999763 2566 666779999999999999886 6889999997654
Q ss_pred CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEe
Q 004100 112 KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (773)
Q Consensus 112 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (773)
++++.++|.+.+|..+-........-|++|+. .|.|++.+.+.
T Consensus 87 --~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP------~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 --DLISETTVELYSLAERCRKNNGKTEIWLELKP------QGRMLMNARYF 129 (138)
T ss_dssp --SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS------SCEEEEEEEEC
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEEEE
Confidence 89999999999999541000234678999986 48899998775
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=93.31 E-value=0.19 Score=45.43 Aligned_cols=126 Identities=15% Similarity=0.128 Sum_probs=85.6
Q ss_pred ccCceeEEEEEEEEeecCCCCC--CCCCCCcEEEEEE--CC-eeeeeeccCCCCCCeeecEEEEEecC-------CCCce
Q 004100 33 LVEQMQYLYVRVVKAKDLPPKD--VTGSCDPYVEVKM--GN-YKGTTRHFEKKTNPEWNQVFAFSKDR-------IQSSV 100 (773)
Q Consensus 33 ~~~~~~~L~V~v~~a~~L~~~d--~~~~~dpyv~v~~--~~-~~~~T~~~~~~~nP~WnE~f~f~v~~-------~~~~~ 100 (773)
+.+.-+.+.|+|.++. +.+.. ..+..+|..-+.+ -+ +.+.|.+.. +.+|.+|-+-.+.|.. +.+..
T Consensus 13 l~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 13 LERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp CCSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred ccCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 4456678999999986 32110 0134577555554 45 455565555 8899999998888742 12567
Q ss_pred EEEEEEeCCCCCCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCC-ceeeEEEEEEEEecc
Q 004100 101 LEVTVKDKDFVKDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGD-KVRGELMLAVWMGTQ 164 (773)
Q Consensus 101 l~i~V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~~~~~~~ 164 (773)
+.++++.......+.+|.+.|+|.++..+.. ....-.+|....|. ..-|.|.+.+.+..+
T Consensus 91 l~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 91 ITLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEecc
Confidence 9999988754477899999999999996532 23345578777663 357999888877654
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=88.55 E-value=5.1 Score=38.36 Aligned_cols=40 Identities=13% Similarity=0.257 Sum_probs=32.5
Q ss_pred eeeeeccCCCCCCeeecEEEEEec--CCCCceEEEEEEeCCC
Q 004100 71 KGTTRHFEKKTNPEWNQVFAFSKD--RIQSSVLEVTVKDKDF 110 (773)
Q Consensus 71 ~~~T~~~~~~~nP~WnE~f~f~v~--~~~~~~l~i~V~d~~~ 110 (773)
.++|.+...+.+|.|+|++.+.+. ......|.|++++...
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 467888888999999999999884 3456889999998654
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.41 E-value=3 Score=49.32 Aligned_cols=106 Identities=14% Similarity=0.186 Sum_probs=68.5
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeccCCCCCCeeecEEEEEe--cC-CCCceE
Q 004100 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY----KGTTRHFEKKTNPEWNQVFAFSK--DR-IQSSVL 101 (773)
Q Consensus 31 ~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~--~~~----~~~T~~~~~~~nP~WnE~f~f~v--~~-~~~~~l 101 (773)
.++.+ .++|+|.++.++... ...+-||.+.+ |++ ..+|+.+....+|.|||.+.|++ .+ +....|
T Consensus 213 ~~~~~---~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L 286 (940)
T 2wxf_A 213 WSLEQ---PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL 286 (940)
T ss_dssp TTCCS---EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred hhcCC---ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence 45544 699999999999754 24577777655 553 33455555577899999999987 33 457899
Q ss_pred EEEEEeCCCC-------------CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEEe
Q 004100 102 EVTVKDKDFV-------------KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWMG 162 (773)
Q Consensus 102 ~i~V~d~~~~-------------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~~ 162 (773)
.|.||+.... .+..+|-+.++|-+.. |.-.+|...+.+|-.
T Consensus 287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~--------------------~~l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK--------------------DQLKTGERCLYMWPS 340 (940)
T ss_dssp EEEEEEEC----------------CEEEEEEEEESBCTT--------------------SBBCCEEEEEECEEC
T ss_pred EEEEEEecCCccCccccccccccccceEEEEeeeEECCc--------------------CccccCCEEEEEeeC
Confidence 9999995321 1235566555555433 322358888888863
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=85.35 E-value=5.4 Score=47.56 Aligned_cols=106 Identities=15% Similarity=0.217 Sum_probs=69.9
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeeeeccCCCCCCeeecEEEEEe--c-CCCCceE
Q 004100 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY----KGTTRHFEKKTNPEWNQVFAFSK--D-RIQSSVL 101 (773)
Q Consensus 31 ~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~--~~~----~~~T~~~~~~~nP~WnE~f~f~v--~-~~~~~~l 101 (773)
.++.+ .++|+|.++.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++ . -+....|
T Consensus 351 w~~~~---~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL 425 (1091)
T 3hhm_A 351 WVINS---ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARL 425 (1091)
T ss_dssp GGCCS---EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred hhCCC---CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEE
Confidence 45544 6899999999886543 334577877776 442 33454443 56888999999987 2 3457899
Q ss_pred EEEEEeCCCC-----CCeeeEEEEEEcCccCCCCCCCCCCcCeEEEeeeCCCCceeeEEEEEEEE
Q 004100 102 EVTVKDKDFV-----KDDFMGRVLFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKVRGELMLAVWM 161 (773)
Q Consensus 102 ~i~V~d~~~~-----~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~~~~ 161 (773)
.|.||+.... ....+|-+.+.|-+.. |.=.+|...+.+|-
T Consensus 426 ~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~--------------------~~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 426 CLSICSVKGRKGAKEEHCPLAWGNINLFDYT--------------------DTLVSGKMALNLWP 470 (1091)
T ss_dssp EEEECCCCCCC-------CCEEEEEESBCTT--------------------CBBCCEEEEEECEE
T ss_pred EEEEEEecCccCcccccceeEEeeeeeEccC--------------------CeEEcCCeEEEeec
Confidence 9999986542 2346677776666543 22225888888884
No 103
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=84.73 E-value=4.1 Score=36.73 Aligned_cols=125 Identities=14% Similarity=0.223 Sum_probs=80.3
Q ss_pred CccceEEEEEEEccCCCCCccCCCCCCCCc--EEEEEECCeeeeeeeccCCCCCccccEEEEEEeCC--------CceEE
Q 004100 359 SSIGVLELGILNAQGLMPMKTKDGRGTTDA--YCVAKYGQKWVRTRTIIDSPTPKWNEQYTWEVFDP--------CTVIT 428 (773)
Q Consensus 359 ~~~g~l~v~v~~a~~L~~~~~~~~~~~~dp--yv~v~~~~~~~~T~~~~~t~~P~wne~~~f~v~~~--------~~~l~ 428 (773)
+.-+.+.|.|.++. +.+. ....-+..+| ||.+.+-.....+..+....+|.+|-+-.|.|.-. ...+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~-~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSE-VLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHH-HHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHH-HHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 44478889988887 3221 0000122344 55555555554444455599999999888888522 33788
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccEEEEEecCccc-cCCeEEeeEEeEeecCCCc-ccccEEEEEEEEeec
Q 004100 429 IGVFDNCHLHGGDKAGGARDSRIGKVRIRLSTLE-TDRVYTHSYPLLVLYPNGV-KKMGEIHLAVRFTCS 496 (773)
Q Consensus 429 v~v~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~g~-~~~G~v~l~~~~~~~ 496 (773)
|+++.... +.-+.||.+.|+|.++. ....+....+|.+. .|. ...|.|+..+++..+
T Consensus 93 lELhqa~g---------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~--~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAYS---------TEYETIAACQLKFHEILEKSGRIFCTASLIGT--KGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEECS---------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBS--SSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEeeC---------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcC--CCCcceEEEEEEEEEEecc
Confidence 88887532 14579999999999985 44446667788664 332 356999988887543
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=81.61 E-value=4.2 Score=48.11 Aligned_cols=94 Identities=12% Similarity=0.247 Sum_probs=62.8
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCee----eeeeeccCCCCCccccEEEEEEe--C-C-CceEEEEE
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGV 431 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v 431 (773)
..++|.|..+.++... ..++-||.+.+ |++. ..|..+.-..+|.|||.++|++. + | ...|.|.|
T Consensus 217 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp SEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEEEecccCCC------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 6899999999998642 34778888765 7654 35555555778999999999887 3 3 78999999
Q ss_pred EeCCCC--CC-CCC-CCCCCCCccEEEEEecCcc
Q 004100 432 FDNCHL--HG-GDK-AGGARDSRIGKVRIRLSTL 461 (773)
Q Consensus 432 ~d~~~~--~~-~~~-~~~~~d~~lG~~~i~l~~l 461 (773)
|+.... +. +.+ .....+..||.+.+++-+-
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 996321 10 000 0011356999999998764
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=81.59 E-value=5.5 Score=47.54 Aligned_cols=91 Identities=20% Similarity=0.334 Sum_probs=61.9
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCee----eeeeeccCCCCCccccEEEEEEe--C-C-CceEEEEE
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW----VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGV 431 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~----~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v 431 (773)
..++|.|+.+.++.. +.....+-||.+.+ |++. .+|+.+. ..+|.|||.++|++. + | .+.|.|.|
T Consensus 355 ~~f~v~i~~~~~~n~----~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 355 SALRIKILCATYVNV----NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp SEEEEEEEEESCCCC----CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CCEEEEEEEecCCCC----CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 689999999998864 22234678888876 6654 3444333 457889999999887 3 3 78999999
Q ss_pred EeCCCCCCCCCCCCCCCCccEEEEEecCcc
Q 004100 432 FDNCHLHGGDKAGGARDSRIGKVRIRLSTL 461 (773)
Q Consensus 432 ~d~~~~~~~~~~~~~~d~~lG~~~i~l~~l 461 (773)
|+..... + +.+.+..||.+.++|-+-
T Consensus 430 ~~~~~~~-~---~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 430 CSVKGRK-G---AKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCCC-----------CCEEEEEESBCT
T ss_pred EEecCcc-C---cccccceeEEeeeeeEcc
Confidence 9865421 0 112457899999999764
No 106
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=77.08 E-value=2.7 Score=50.32 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=60.3
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEE--ECCee----eeeeeccCCCCCccccEEEEEEeC---C-CceEEEEE
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAK--YGQKW----VRTRTIIDSPTPKWNEQYTWEVFD---P-CTVITIGV 431 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~--~~~~~----~~T~~~~~t~~P~wne~~~f~v~~---~-~~~l~v~v 431 (773)
..++|.|..+.++... ..++-||.+. .|++. .+|..+.-..+|.|||.++|++.- | ...|.|.|
T Consensus 353 ~~f~i~i~~~~~~~~~------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCCC------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCCC------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 6899999999998642 3467777764 47755 355555557789999999998873 3 78999999
Q ss_pred EeCCCCCCCCC--------------CCCCCCCccEEEEEecCcc
Q 004100 432 FDNCHLHGGDK--------------AGGARDSRIGKVRIRLSTL 461 (773)
Q Consensus 432 ~d~~~~~~~~~--------------~~~~~d~~lG~~~i~l~~l 461 (773)
|+......+.+ ...+.+..||.+.++|-+-
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 99642211111 0112345999999998764
No 107
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=74.18 E-value=28 Score=33.24 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=31.6
Q ss_pred EEEEeecccCCCCCccccceEEEEeeCCC--CCeEEEEEEEcc
Q 004100 232 QALRTRVSASRTINPMWNEDLMFVAAEPF--EEHLILTVEDRV 272 (773)
Q Consensus 232 ~~~kT~~~~~~t~nP~wne~f~f~~~~~~--~~~l~i~V~d~~ 272 (773)
..++|.+.++ +.+|.|+|++.+.+.... ...|.|++++..
T Consensus 77 se~~S~V~YH-nk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 77 SEYKSVIYYQ-VKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp SCEECCCCTT-CSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eeEEEEEEEc-CCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 4578888887 899999999998886443 457999988764
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=73.26 E-value=19 Score=42.71 Aligned_cols=75 Identities=16% Similarity=0.171 Sum_probs=47.9
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---eeeeeccCCCCCCeeecEEEEEe--cC-CCCceEE
Q 004100 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVEVKM--GNY---KGTTRHFEKKTNPEWNQVFAFSK--DR-IQSSVLE 102 (773)
Q Consensus 31 ~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~~--~~~---~~~T~~~~~~~nP~WnE~f~f~v--~~-~~~~~l~ 102 (773)
+++.+ .++|+|+++....... ...++-||++.+ |+. ..+|..+.-+.+|.|||.+.|++ .+ +....|.
T Consensus 214 w~~~~---~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~ 289 (961)
T 1e7u_A 214 WDCDR---KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLN 289 (961)
T ss_dssp SCCCS---EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEE
T ss_pred eeccC---ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEE
Confidence 45544 5888888887522111 224566776643 553 23454444567899999999986 33 4578999
Q ss_pred EEEEeCC
Q 004100 103 VTVKDKD 109 (773)
Q Consensus 103 i~V~d~~ 109 (773)
|.||+..
T Consensus 290 ~ti~~~~ 296 (961)
T 1e7u_A 290 LQIYCGA 296 (961)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 9999853
No 109
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=69.34 E-value=11 Score=44.56 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=59.4
Q ss_pred ceEEEEEEEccCCCCCccCCCCCCCCcEEEEEE--CCee---eeeeeccCCCCCccccEEEEEEe--C-C-CceEEEEEE
Q 004100 362 GVLELGILNAQGLMPMKTKDGRGTTDAYCVAKY--GQKW---VRTRTIIDSPTPKWNEQYTWEVF--D-P-CTVITIGVF 432 (773)
Q Consensus 362 g~l~v~v~~a~~L~~~~~~~~~~~~dpyv~v~~--~~~~---~~T~~~~~t~~P~wne~~~f~v~--~-~-~~~l~v~v~ 432 (773)
..++|.|..+...... ....++-||.+.+ |++. .+|..+.-+.+|.|||.++|++. + | ...|.+.||
T Consensus 218 ~~f~i~i~~~~~~~~~----~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP----RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SEEEEEEEEEECSSCC----TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEeeccccccc----CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 5788889888652110 1134678888754 7654 24544444668999999999887 3 3 789999999
Q ss_pred eCCCCCCCCC--------CCCCCCCccEEEEEecCcc
Q 004100 433 DNCHLHGGDK--------AGGARDSRIGKVRIRLSTL 461 (773)
Q Consensus 433 d~~~~~~~~~--------~~~~~d~~lG~~~i~l~~l 461 (773)
+....+...+ ...++...||.+.++|-+-
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 8543210000 0122456899999999764
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=67.43 E-value=5.8 Score=47.57 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=51.4
Q ss_pred ecccCceeEEEEEEEEeecCCCCCCCCCCCcEEE--EEECCe----eeeeeccCCCCCCeeecEEEEEe--cC-CCCceE
Q 004100 31 YDLVEQMQYLYVRVVKAKDLPPKDVTGSCDPYVE--VKMGNY----KGTTRHFEKKTNPEWNQVFAFSK--DR-IQSSVL 101 (773)
Q Consensus 31 ~~~~~~~~~L~V~v~~a~~L~~~d~~~~~dpyv~--v~~~~~----~~~T~~~~~~~nP~WnE~f~f~v--~~-~~~~~l 101 (773)
.++.+ .++|+|..+.++...+ ..+-||. +.-|+. ..+|+.+..+.+|.|||.+.|++ .+ +....|
T Consensus 349 ~~~~~---~f~i~i~~~~~~~~~~---~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L 422 (1092)
T 2y3a_A 349 WDNNN---PFQITLVKGNKLNTEE---TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARL 422 (1092)
T ss_dssp CCCCS---EEEEEECCCCCCCCCS---SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEE
T ss_pred hhcCC---CEEEEEEEeccCCCCC---CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEE
Confidence 45544 6999999999987542 4566765 444663 23455555577899999999987 33 347899
Q ss_pred EEEEEeCC
Q 004100 102 EVTVKDKD 109 (773)
Q Consensus 102 ~i~V~d~~ 109 (773)
.|.||+..
T Consensus 423 ~~ti~~~~ 430 (1092)
T 2y3a_A 423 CFAVYAVL 430 (1092)
T ss_dssp EEECCCC-
T ss_pred EEEEEEec
Confidence 99999864
No 111
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=25.68 E-value=1.4e+02 Score=23.91 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHhhccCCChhhH
Q 004100 677 RYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRAT 714 (773)
Q Consensus 677 ~~~~l~~~~~~vQ~~l~~~a~~~e~~~nl~~w~~p~~t 714 (773)
+++.|.+-...++..-..+-..-.+++.-+-|++=+..
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555556666666667777788876544
Done!