Query 004101
Match_columns 773
No_of_seqs 471 out of 3116
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 14:18:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-119 1E-123 1046.7 50.7 623 126-773 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 6E-109 2E-113 964.7 54.0 605 126-772 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.8E-78 1.6E-82 731.4 46.4 539 139-772 6-605 (926)
4 3afg_A Subtilisin-like serine 100.0 1.4E-58 4.7E-63 529.7 39.7 360 41-626 34-413 (539)
5 2p4e_P Proprotein convertase s 100.0 6.8E-59 2.3E-63 534.2 7.3 335 43-600 76-423 (692)
6 2z2z_A TK-subtilisin precursor 100.0 4.6E-56 1.6E-60 493.0 23.6 325 42-603 2-374 (395)
7 1y9z_A Alkaline serine proteas 100.0 3E-53 1E-57 477.1 25.9 383 133-640 6-436 (441)
8 3t41_A Epidermin leader peptid 100.0 6.2E-53 2.1E-57 479.7 28.4 336 42-601 44-446 (471)
9 1r6v_A Subtilisin-like serine 100.0 4.1E-52 1.4E-56 481.4 26.0 346 41-605 30-423 (671)
10 1dbi_A AK.1 serine protease; h 100.0 1.7E-49 5.9E-54 419.5 22.5 250 132-602 12-263 (280)
11 1thm_A Thermitase; hydrolase(s 100.0 8E-49 2.7E-53 414.4 21.4 243 139-603 20-263 (279)
12 1r0r_E Subtilisin carlsberg; h 100.0 7.5E-49 2.6E-53 413.6 20.9 246 133-600 6-257 (274)
13 1gci_A Subtilisin; hydrolase, 100.0 1.2E-48 3.9E-53 410.6 22.0 239 139-600 13-252 (269)
14 1sh7_A Extracellular subtilisi 100.0 2E-48 6.8E-53 411.8 23.3 236 140-601 19-258 (284)
15 2x8j_A Intracellular subtilisi 100.0 6E-49 2.1E-53 424.4 19.2 253 132-600 22-292 (327)
16 2ixt_A 36KDA protease; serine 100.0 3.2E-48 1.1E-52 417.0 24.3 269 133-602 8-289 (310)
17 1to2_E Subtilisin BPN'; serine 100.0 2E-48 7E-53 411.6 21.4 247 133-600 6-258 (281)
18 4h6x_A Thiazoline oxidase/subt 100.0 4.5E-50 1.5E-54 438.7 7.8 285 140-601 21-316 (357)
19 2b6n_A Proteinase K; S binding 100.0 6.5E-48 2.2E-52 407.3 20.9 237 140-600 21-261 (278)
20 4dzt_A Aqualysin-1, aqualysin- 100.0 4.9E-48 1.7E-52 408.3 18.4 239 139-603 20-262 (276)
21 2z30_A TK-subtilisin; thermoco 100.0 1.3E-47 4.5E-52 413.4 19.6 254 132-603 9-299 (320)
22 3zxy_A Subtilisin-like protein 100.0 1.1E-47 3.7E-52 407.1 17.9 243 146-601 3-253 (282)
23 2iy9_A SUBA; toxin, shiga, pla 100.0 1.1E-47 3.7E-52 419.3 16.8 254 139-603 32-312 (347)
24 2pwa_A Proteinase K; structure 100.0 2.6E-47 8.8E-52 402.2 15.0 228 142-600 24-260 (279)
25 4h6w_A N-terminal cyanobactin 100.0 6.1E-47 2.1E-51 406.4 17.5 252 140-604 11-269 (306)
26 1wmd_A Protease; alpha-beta hy 100.0 1.8E-45 6.1E-50 413.5 22.2 269 140-600 11-297 (434)
27 3f7m_A Alkaline serine proteas 100.0 1.3E-45 4.4E-50 390.4 18.8 231 141-602 24-263 (279)
28 3lxu_X Tripeptidyl-peptidase 2 100.0 1.3E-44 4.3E-49 435.1 29.1 357 227-771 266-651 (1354)
29 3lpc_A APRB2; protease, subtil 100.0 6E-45 2E-49 396.7 24.0 279 139-600 21-317 (340)
30 2qtw_B Proprotein convertase s 100.0 1.6E-45 5.3E-50 413.1 16.9 246 142-600 18-271 (546)
31 1p8j_A Furin precursor; prohor 100.0 8.1E-44 2.8E-48 403.4 26.0 288 139-630 27-329 (471)
32 2oxa_A Extracellular serine pr 100.0 1.6E-42 5.5E-47 404.2 29.3 266 139-605 59-378 (600)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 8.9E-43 3E-47 397.5 26.5 252 139-602 43-311 (503)
34 3hjr_A Extracellular serine pr 100.0 6.4E-40 2.2E-44 383.7 30.5 289 139-606 59-379 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 5E-24 1.7E-28 243.4 9.3 96 259-358 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 4.6E-21 1.6E-25 208.8 9.9 100 260-359 90-207 (372)
37 2w2n_P Proprotein convertase s 99.0 5.2E-10 1.8E-14 100.3 6.8 77 42-124 37-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 1.1E-09 3.7E-14 124.3 11.0 98 260-358 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 98.9 3.2E-09 1.1E-13 89.1 8.4 73 41-128 7-79 (80)
40 2qtw_A Proprotein convertase s 98.8 8.4E-09 2.9E-13 93.5 6.9 77 42-124 47-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.6 5E-08 1.7E-12 80.7 6.7 70 43-124 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.6 2.6E-07 8.8E-12 89.9 11.6 94 403-496 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.6 0.00012 4E-09 58.2 6.5 62 43-123 2-63 (65)
44 2ys4_A Hydrocephalus-inducing 96.8 0.0088 3E-07 53.8 10.7 64 680-754 40-103 (122)
45 2ek8_A Aminopeptidase; metallo 95.9 0.036 1.2E-06 61.0 11.8 72 412-483 108-182 (421)
46 3iib_A Peptidase M28; YP_92679 95.0 0.09 3.1E-06 58.2 11.1 102 389-496 105-227 (444)
47 3kas_A Transferrin receptor pr 94.4 0.066 2.3E-06 61.8 7.9 69 415-483 128-230 (640)
48 2e6j_A Hydin protein; PAPD, st 93.7 0.19 6.6E-06 43.9 8.0 68 681-755 26-94 (112)
49 3fed_A Glutamate carboxypeptid 93.3 0.11 3.8E-06 60.6 7.2 71 414-484 150-268 (707)
50 3qbt_B Inositol polyphosphate 91.1 2.9 9.8E-05 38.1 12.6 88 681-773 43-138 (140)
51 2r39_A FIXG-related protein; s 89.5 1.5 5.2E-05 38.6 9.0 56 682-739 32-87 (118)
52 2qsv_A Uncharacterized protein 89.3 1.8 6.2E-05 42.7 10.4 82 681-770 19-103 (220)
53 3lxu_X Tripeptidyl-peptidase 2 86.3 0.36 1.2E-05 59.5 3.6 25 145-169 31-55 (1354)
54 3qis_A Inositol polyphosphate 84.7 8.8 0.0003 40.9 13.3 85 681-772 46-140 (366)
55 1y9z_A Alkaline serine proteas 84.4 0.66 2.2E-05 51.2 4.4 30 503-540 182-211 (441)
56 2qsv_A Uncharacterized protein 81.2 18 0.00062 35.3 13.1 92 666-769 121-217 (220)
57 3idu_A Uncharacterized protein 74.2 13 0.00044 33.1 8.6 52 680-735 32-84 (127)
58 3zyz_A Beta-D-glucoside glucoh 69.0 20 0.00069 41.7 11.0 56 682-738 614-676 (713)
59 2x41_A Beta-glucosidase; hydro 68.8 12 0.0004 43.8 9.1 75 663-738 594-679 (721)
60 3isy_A Bsupi, intracellular pr 64.8 46 0.0016 29.2 9.9 55 680-735 17-88 (120)
61 1z9l_A Vesicle-associated memb 61.0 29 0.00099 30.7 8.2 52 682-736 28-79 (128)
62 1wic_A Hypothetical protein ri 60.6 25 0.00086 32.2 7.9 53 682-737 36-88 (152)
63 1row_A SSP-19, MSP-domain prot 58.9 44 0.0015 28.7 8.6 51 684-737 18-68 (109)
64 2cri_A Vesicle-associated memb 56.2 28 0.00097 31.6 7.4 52 682-736 32-83 (147)
65 1msp_A MSP, major sperm protei 56.2 37 0.0013 29.9 8.0 52 682-736 26-77 (126)
66 1m1s_A WR4; structural genomic 54.5 33 0.0011 29.9 7.1 52 683-737 25-76 (116)
67 1w8o_A Bacterial sialidase; 3D 53.2 62 0.0021 36.5 11.4 77 669-754 364-441 (601)
68 3sd2_A Putative member of DUF3 52.5 64 0.0022 27.2 8.1 66 671-753 35-100 (101)
69 3abz_A Beta-glucosidase I; gly 45.5 61 0.0021 38.4 9.8 161 555-737 618-799 (845)
70 1wgl_A TOLL-interacting protei 43.2 20 0.00068 27.2 3.4 36 562-597 2-37 (59)
71 2kq1_A BH0266 protein; solutio 41.4 8 0.00027 33.9 1.0 56 683-738 55-112 (119)
72 2l0d_A Cell surface protein; s 38.9 1E+02 0.0034 26.7 7.7 25 680-704 18-43 (114)
73 4ep8_B Urease subunit beta; al 35.6 41 0.0014 28.2 4.3 16 682-697 19-34 (101)
74 2l04_A Major tail protein V; b 34.9 62 0.0021 26.8 5.5 28 710-738 8-35 (91)
75 1yew_A Particulate methane mon 34.0 95 0.0033 32.4 7.7 53 680-736 263-337 (382)
76 3d33_A Domain of unknown funct 32.4 2.3E+02 0.008 24.1 10.0 68 671-753 39-107 (108)
77 3rfr_A PMOB; membrane, oxidore 31.3 3.2E+02 0.011 28.9 11.1 51 680-736 297-369 (419)
78 3hrz_B Cobra venom factor; ser 31.2 1.9E+02 0.0065 28.6 9.5 66 666-736 85-155 (252)
79 3q48_A Chaperone CUPB2; IG fol 30.7 2.1E+02 0.007 28.5 9.6 54 682-736 43-104 (257)
80 3ndz_E Endoglucanase D; cellot 30.7 2.5E+02 0.0085 23.8 9.1 30 683-712 17-47 (107)
81 4ubp_B Protein (urease (chain 29.6 46 0.0016 29.1 3.8 16 682-697 25-40 (126)
82 4ac7_B Urease subunit beta; hy 29.6 46 0.0016 29.1 3.8 16 682-697 25-40 (126)
83 1ni7_A ER75, hypothetical prot 28.0 42 0.0014 30.9 3.6 30 561-591 81-110 (155)
84 2hr0_B Complement C3 alpha' ch 24.6 4E+02 0.014 31.7 12.4 66 666-736 84-155 (915)
85 3g0m_A Cysteine desulfuration 23.8 40 0.0014 30.4 2.6 33 557-590 70-102 (141)
86 2xg5_A PAPD, chaperone protein 21.3 4.9E+02 0.017 24.9 10.2 53 682-735 15-73 (218)
87 4acq_A Alpha-2-macroglobulin; 21.1 2.2E+02 0.0075 36.0 9.4 66 666-736 772-840 (1451)
88 4ay0_A Chaperone protein CAF1M 20.5 3.6E+02 0.012 26.0 8.9 55 682-737 27-86 (218)
89 4fxk_B Complement C4-A alpha c 20.4 90 0.0031 36.5 5.4 66 666-736 157-225 (767)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=3.9e-119 Score=1046.68 Aligned_cols=623 Identities=39% Similarity=0.650 Sum_probs=555.2
Q ss_pred cccCcccccCCCCCCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeec
Q 004101 126 TTYSYKFLGLSPTNGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFF 205 (773)
Q Consensus 126 ~~~s~~~~g~~~~~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 205 (773)
++++|+|+|+.+ ..++|..+.+|+||+|||||||||++||+|.+.|++++|.+|+|.|+.|.+|+...||+|++++++|
T Consensus 1 Tt~s~~flgl~~-~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f 79 (649)
T 3i6s_A 1 TTHTSDFLKLNP-SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYF 79 (649)
T ss_dssp CCSHHHHTTCCS-SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEEC
T ss_pred CCCChHHcCCCC-chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEec
Confidence 578999999986 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHH
Q 004101 206 TKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDIL 285 (773)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~ 285 (773)
.++++.... +...+..+++|.+||||||||||||+.+++.+++|++.|.+.||||+|+|++||+|+..|+..++++
T Consensus 80 ~~~~~~~~~----~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~ 155 (649)
T 3i6s_A 80 NKGILANDP----TVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLI 155 (649)
T ss_dssp CHHHHHHCT----TCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHH
T ss_pred cCccccccc----ccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHH
Confidence 877643221 2334456789999999999999999999988999999999999999999999999999889999999
Q ss_pred HHHHHhhhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeE
Q 004101 286 AAMDVAIRDGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAI 365 (773)
Q Consensus 286 ~ai~~A~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~ 365 (773)
+||+||+++|+||||||||+...++..+.+.+++++|.++|++||+||||+|+...++++.+||+|+|||++.||.|...
T Consensus 156 ~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~ 235 (649)
T 3i6s_A 156 AAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGT 235 (649)
T ss_dssp HHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeE
Confidence 99999999999999999999877778899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcc--cceEEEEecCCCchhhHHHHHHHcCc
Q 004101 366 VRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEV--RGKMVVCDRGVNGRAEKGQVVKEAGG 443 (773)
Q Consensus 366 ~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~~~~~~~~~~~~~~Ga 443 (773)
+.+++++.+.|.+++..... ...+|+++ +. ....|.+..++..++ +|||++|.|+.+.+.+|..+++.+|+
T Consensus 236 ~~lgng~~~~g~sl~~~~~~---~~~~plv~--~~--~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga 308 (649)
T 3i6s_A 236 LTLGNGLKIRGWSLFPARAF---VRDSPVIY--NK--TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLK 308 (649)
T ss_dssp EEETTSCEEEEECCCSSCBC---EEEEEEEC--CT--TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCS
T ss_pred EEeCCCcEEeeeecccCccc---CcceeeEe--cc--cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCc
Confidence 99999999999999987642 46799999 44 346799888888877 99999999999999999999999999
Q ss_pred eEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcc
Q 004101 444 AAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTIL 523 (773)
Q Consensus 444 ~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~ 523 (773)
.|+|++|+. .....+.+.+|.+.++.++|+.|++|++++.+++++|.+..+..+..+++.+++||||||+...+++|
T Consensus 309 ~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~il 385 (649)
T 3i6s_A 309 AAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGIS 385 (649)
T ss_dssp EEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSC
T ss_pred eEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCcc
Confidence 999999987 34456678999999999999999999999999999999999999988999999999999999888999
Q ss_pred cCceEeCCCceEeccCCCCCCCCCCCCC-cccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCC
Q 004101 524 KPDVIAPGVNIIAAWPQNLGPSSLPEDN-RRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHF 602 (773)
Q Consensus 524 KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~ 602 (773)
||||+|||++|+++|+..........+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++++.
T Consensus 386 KPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~ 465 (649)
T 3i6s_A 386 KPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNT 465 (649)
T ss_dssp SCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTT
T ss_pred CCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCC
Confidence 9999999999999998865433333232 346899999999999999999999999999999999999999999999999
Q ss_pred CCcccCCC--CCc-----------ccccCCCCccccCCccccccccccCCCCccceeEeeccccc--ccccccCCccccc
Q 004101 603 GKPIMDGN--KPP-----------AVKAINPGLIYDITPDEYVTHLCTLGYTESEIFTITHRNVS--CHENLRMNRGFSL 667 (773)
Q Consensus 603 g~~~~~~~--~~a-----------~~~a~~~Glv~~~~~~dy~~~~~~~g~~~~~i~~~~~~~~~--c~~~~~~~~~~~l 667 (773)
+.++.+.. .++ ..+|++||||||++.+||++|||++||+..+|+.+++.+.. |+. ... +|
T Consensus 466 g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~-~l 540 (649)
T 3i6s_A 466 RKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSA-DL 540 (649)
T ss_dssp SSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCC-CC
T ss_pred CCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chh-hc
Confidence 98887642 222 28999999999999999999999999999999999988777 975 345 99
Q ss_pred CCCceeEEe-ecCc-ce--EEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCC
Q 004101 668 NYPSISVVF-KHGK-KS--TMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDR 743 (773)
Q Consensus 668 n~ps~~~~~-~~~~-~~--~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~ 743 (773)
|||||++.+ .... .. ++|+|||||||+..++|+++++.|.|++|+|+|++|+|.+.+|+++|+|||+.......
T Consensus 541 NyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~-- 618 (649)
T 3i6s_A 541 NYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQ-- 618 (649)
T ss_dssp CCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC-----
T ss_pred CCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCC--
Confidence 999999986 3221 12 89999999999999999999999999999999999999989999999999998765444
Q ss_pred CceEeEEEEEEEcCCCCccEEEeeEEEEeC
Q 004101 744 MSFAQGQLAWVHSGNSSLYRVRSPISVTWK 773 (773)
Q Consensus 744 ~~~~~G~l~~~~~~~~~~~~v~~P~~~~~~ 773 (773)
.+.||+|+|++ ++|. |.||+||+|++.
T Consensus 619 -~~~fg~l~w~~-~~~~-h~vrsPi~v~~~ 645 (649)
T 3i6s_A 619 -SRNVGSITWVE-QNGN-HSVRSPIVTSPI 645 (649)
T ss_dssp -CCCEEEEEEEE-TTSC-CEEEEEEEEEEC
T ss_pred -ceEEEEEEEEc-CCCC-eEEEEeEEEEEc
Confidence 68999999993 1288 999999999873
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=5.6e-109 Score=964.72 Aligned_cols=605 Identities=39% Similarity=0.653 Sum_probs=504.2
Q ss_pred cccCcccccCCCCCCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeec
Q 004101 126 TTYSYKFLGLSPTNGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFF 205 (773)
Q Consensus 126 ~~~s~~~~g~~~~~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 205 (773)
+|++|+|+||++ .+|....+|+||+|||||||||++||+|.|+++++++.+|+|.|+.+.+|. ||+|++++++|
T Consensus 1 tt~s~~flGl~~---~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~ 74 (621)
T 3vta_A 1 TTRSWDFLGFPL---TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSY 74 (621)
T ss_dssp CCSHHHHTTCCT---TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEEC
T ss_pred CCCChhHcCCCc---cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeec
Confidence 578999999954 789999999999999999999999999999999999999999999999987 99999999999
Q ss_pred CCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHH
Q 004101 206 TKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDIL 285 (773)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~ 285 (773)
..+... ...+..+++|++||||||||||||+.+.+.+.+|.+.|.++||||+|+|++||+|++.||..++++
T Consensus 75 ~~~~~~--------~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~ 146 (621)
T 3vta_A 75 HIGRPI--------SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDIL 146 (621)
T ss_dssp CCSSSC--------CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHH
T ss_pred ccCCcc--------CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHH
Confidence 877532 233446789999999999999999998888888888889999999999999999999999999999
Q ss_pred HHHHHhhhCCCcEEEeccCCCC-CCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCcccee
Q 004101 286 AAMDVAIRDGVDVLSLSLGGFP-LPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPA 364 (773)
Q Consensus 286 ~ai~~A~~~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~ 364 (773)
+||++|+++|+||||||||+.. .....+++++++++|+++||++|+||||+|+...++++.+||+++|++++.++.|..
T Consensus 147 ~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~ 226 (621)
T 3vta_A 147 AAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVT 226 (621)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEE
T ss_pred HHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeecccccee
Confidence 9999999999999999999875 455678889999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCC--------CcccCCCCCCCcccceEEEEecCCCchhhHHH
Q 004101 365 IVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGS--------EFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQ 436 (773)
Q Consensus 365 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~--------~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 436 (773)
.+.++++..+.+.+++... ...+++++ +..... ..|.+..+++.+++|||++|.++. ..+..
T Consensus 227 ~~~~~~~~~~~~~s~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~---~~~~~ 296 (621)
T 3vta_A 227 QVQIGNGQSFQGVSINTFD-----NQYYPLVS--GRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF---GPHEF 296 (621)
T ss_dssp EEEETTSCEEEEBCCCCSC-----CEEECEEE--TTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC---CHHHH
T ss_pred eEEeccCceeeeeecccCC-----Cccccccc--ccccccccccccccccccccccccccccceEEEEecCC---ChhHH
Confidence 9999999999998887543 34566666 443221 679999999999999999998754 45667
Q ss_pred HHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCC
Q 004101 437 VVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPS 516 (773)
Q Consensus 437 ~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~ 516 (773)
+....|+.++|++++... ..+.+.+|...++..++..+..|+..+..+..++....+ .....++.++.||||||+
T Consensus 297 ~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~ 371 (621)
T 3vta_A 297 FKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPN 371 (621)
T ss_dssp HHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSC
T ss_pred hhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCC
Confidence 778899999999987543 345678999999999999999999999988887754443 445678899999999999
Q ss_pred CCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 004101 517 LYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTA 596 (773)
Q Consensus 517 ~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA 596 (773)
...++++||||+|||++|+|+|+....... ......|..+||||||||||||+||||||+||+|+|++||++||+||
T Consensus 372 ~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA 448 (621)
T 3vta_A 372 RATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTA 448 (621)
T ss_dssp TTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTC
T ss_pred CCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcC
Confidence 888999999999999999999986543322 23347899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccC---CC-CCcccccCCCCccccCCccccccccccCCCCccceeEeecccccccccccCCcccccCCCce
Q 004101 597 DGNDHFGKPIMD---GN-KPPAVKAINPGLIYDITPDEYVTHLCTLGYTESEIFTITHRNVSCHENLRMNRGFSLNYPSI 672 (773)
Q Consensus 597 ~~~~~~g~~~~~---~~-~~a~~~a~~~Glv~~~~~~dy~~~~~~~g~~~~~i~~~~~~~~~c~~~~~~~~~~~ln~ps~ 672 (773)
++++..+.|... +. .....+|++||||||++..||+.|||++||+..+++.+++....|......... +||||||
T Consensus 449 ~~~~~~~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lN~pS~ 527 (621)
T 3vta_A 449 SPMNARFNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVW-DLNYPSF 527 (621)
T ss_dssp BCCCTTTCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGG-GSCCSSE
T ss_pred CcccccCCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCccc-ccccccE
Confidence 999887765422 22 444589999999999999999999999999999999999988889765544455 9999999
Q ss_pred eEEeecC-cceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEEE
Q 004101 673 SVVFKHG-KKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQL 751 (773)
Q Consensus 673 ~~~~~~~-~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~l 751 (773)
++.+... ...++|+|||||+|....+|+++++.|.|++|+|+|++|+|.+.||+++|+|||+... .. .++||+|
T Consensus 528 ~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~--~~---~~~~g~l 602 (621)
T 3vta_A 528 GLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI--KG---FVVSASL 602 (621)
T ss_dssp EEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC--CS---SEEEEEE
T ss_pred EEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC--CC---ceEEEEE
Confidence 9985432 2378999999999999999999999999999999999999998899999999998653 34 7999999
Q ss_pred EEEEcCCCCccEEEeeEEEEe
Q 004101 752 AWVHSGNSSLYRVRSPISVTW 772 (773)
Q Consensus 752 ~~~~~~~~~~~~v~~P~~~~~ 772 (773)
+|+ ||. |+||+||+|+.
T Consensus 603 ~w~---d~~-h~Vr~Pi~v~~ 619 (621)
T 3vta_A 603 VWS---DGV-HYVRSPITITS 619 (621)
T ss_dssp EEE---CSS-CCCEEEEEEEC
T ss_pred EEE---cCC-EEEEeCEEEEE
Confidence 999 999 99999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.8e-78 Score=731.37 Aligned_cols=539 Identities=20% Similarity=0.256 Sum_probs=414.3
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCC----------CCCCCCCceeeeeecCCc
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSF----------NSSNCNRKLIGARFFTKG 208 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~~ 208 (773)
+..+|..+.+|+||+|||||||||++||+|.+ +..|++.|..+..| ....||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 34699999999999999999999999999984 34566666432221 123599999999999764
Q ss_pred ccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC--CCHHHHHH
Q 004101 209 HRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG--CYSSDILA 286 (773)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ 286 (773)
. ...|..||||||||||||+.+...+. .+.+.||||+|+|++||+|++.+ +..+++++
T Consensus 80 ~----------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~ 139 (926)
T 1xf1_A 80 G----------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQ 139 (926)
T ss_dssp S----------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHH
T ss_pred C----------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHH
Confidence 3 12288999999999999987544321 24568999999999999999876 55678999
Q ss_pred HHHHhhhCCCcEEEeccCCCC--CCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCC-------------C--ccccCCCc
Q 004101 287 AMDVAIRDGVDVLSLSLGGFP--LPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQ-------------S--SVANIAPW 349 (773)
Q Consensus 287 ai~~A~~~g~dVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------------~--~~~~~~p~ 349 (773)
||+||+++|+||||||||+.. ...+.+.+..+++.|.++|++||+||||+|... . ..++.+||
T Consensus 140 Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~ 219 (926)
T 1xf1_A 140 AIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADS 219 (926)
T ss_dssp HHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCC
T ss_pred HHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCc
Confidence 999999999999999999864 344567788888899999999999999999632 2 23334899
Q ss_pred eEEEcCcCCCccceeEEEe-CCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCC
Q 004101 350 IATVGASTLDRRFPAIVRM-ADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGV 428 (773)
Q Consensus 350 vitVgA~~~~~~~~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~ 428 (773)
+|+|||++.++.+...+.+ +++....+.+++....++. ...+++++ ... .|.+..+ .+++|||++|.|+.
T Consensus 220 vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lv~--~~~----g~~~~~~--~~v~Gkivl~~rg~ 290 (926)
T 1xf1_A 220 TLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEP-NKAYDYAY--ANR----GTKEDDF--KDVKGKIALIERGD 290 (926)
T ss_dssp SEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCT-TCCEEEEE--CTT----SCSTTTT--TTCTTSEEEEECCS
T ss_pred eEEEeccccccccccceEEEcCCCcceeeEEEecCCCCC-CceEEEEE--CCC----CCCccch--hhcCCeEEEEECCC
Confidence 9999999999999988888 6665555555554333321 56799999 432 4766655 68999999999999
Q ss_pred CchhhHHHHHHHcCceEEEEeccCCCCccc-ccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEeccee--ecccCCC
Q 004101 429 NGRAEKGQVVKEAGGAAMILANTEINLEED-SVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTV--IGRSRAP 505 (773)
Q Consensus 429 ~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~ 505 (773)
|.+.+|..+++.+|+.|+|++++....... .....++|...++.++|..|.+ . +..+|.+..+. ......+
T Consensus 291 ~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~--~~~ti~~~~~~~~~~~~~~~ 364 (926)
T 1xf1_A 291 IDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----N--PQKTITFNATPKVLPTASGT 364 (926)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----C--SSCEEEECSSCEEEECSSCS
T ss_pred CCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----C--CceEEEecccceecccCCcc
Confidence 999999999999999999999986543222 2345789999999999988874 3 34556665543 4556678
Q ss_pred ccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHH----HhCC
Q 004101 506 AVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIR----SAYP 581 (773)
Q Consensus 506 ~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~P 581 (773)
.+++||||||+. ++++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||
T Consensus 365 ~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P 429 (926)
T 1xf1_A 365 KLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYP 429 (926)
T ss_dssp BCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSS
T ss_pred eeccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCC
Confidence 999999999996 899999999999999999976 589999999999999999999996 5599
Q ss_pred CCCHHH----HHHHHHhccccCCCCCCcccCCCCCcccccCCCCccccCCccccccccccCCCCccceeEeecccccccc
Q 004101 582 KWSPAA----IKSAIMTTADGNDHFGKPIMDGNKPPAVKAINPGLIYDITPDEYVTHLCTLGYTESEIFTITHRNVSCHE 657 (773)
Q Consensus 582 ~~s~~~----ik~~L~~TA~~~~~~g~~~~~~~~~a~~~a~~~Glv~~~~~~dy~~~~~~~g~~~~~i~~~~~~~~~c~~ 657 (773)
+|+|+| ||++||+||++++..+.. ...+.+.++.|+|....+.+.--|+|..++...
T Consensus 430 ~~sp~~~~~~Iks~L~~TA~~~~~~~~~-----~~~~~~~~G~G~vn~~~A~~~~~~l~~~~~~~~-------------- 490 (926)
T 1xf1_A 430 DMTPSERLDLAKKVLMSSATALYDEDEK-----AYFSPRQQGAGAVDAKKASAATMYVTDKDNTSS-------------- 490 (926)
T ss_dssp SSHHHHHHHHHHHHHHHHSBCCEEGGGT-----EECCHHHHTTCBCCHHHHHHCSEEEEESSSSCS--------------
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccCCCC-----ccCChhccCCCccCHHHhcCCCeEEEcCCCCcc--------------
Confidence 999997 999999999988654211 112245667888766555443336776543211
Q ss_pred cccCCcccccCCCceeEEeecCcceEEEEEEEEecCCCC--eeEEEEEEC--CCCcEEEEecCeeEEec-------CCcE
Q 004101 658 NLRMNRGFSLNYPSISVVFKHGKKSTMIRRRLTNVGSPN--SIYSVKVTA--PEDVEVRIKPQRLIFKY-------VNQS 726 (773)
Q Consensus 658 ~~~~~~~~~ln~ps~~~~~~~~~~~~~~~rtvtn~g~~~--~~y~~~~~~--~~g~~v~v~p~~~~~~~-------~g~~ 726 (773)
+|.+... ....+++|||||+|+.+ .+|++++.. |.+..++|+|..|.|.. +||+
T Consensus 491 -------------~i~l~~~--~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~ 555 (926)
T 1xf1_A 491 -------------KVHLNNV--SDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSS 555 (926)
T ss_dssp -------------CEEEEEE--CSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEE
T ss_pred -------------eeecccc--CccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCE
Confidence 2222211 22588999999999854 567777765 67888888887665543 5999
Q ss_pred EEEEEEEEeecc--------cCCCCCceEeEEEEEEEcCCCCcc-EEEeeEEEEe
Q 004101 727 LIYRIWIISRKR--------MTKDRMSFAQGQLAWVHSGNSSLY-RVRSPISVTW 772 (773)
Q Consensus 727 ~~~~vt~~~~~~--------~~~~~~~~~~G~l~~~~~~~~~~~-~v~~P~~~~~ 772 (773)
++|+|||+++.. +.. .++||+|+|+. .++. | .||+||+++.
T Consensus 556 ~~~~vt~~~~~~~~~~~~~~~~~---~~~~G~i~~~~-~~~~-~~~v~~P~~~~~ 605 (926)
T 1xf1_A 556 KQVTVPIDASRFSKDLLAQMKNG---YFLEGFVRFKQ-DPTK-EELMSIPYIGFR 605 (926)
T ss_dssp EEEEEEEECHHHHHHHHHHSTTC---EEEEEEEEEES-STTS-CCCEEEEEEEEE
T ss_pred EEEEEEEEcCccchhhcccccCC---cEEEEEEEEEe-CCCC-CCEEEeeeEEEe
Confidence 999999998621 123 58999999993 3455 5 5999999874
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.4e-58 Score=529.74 Aligned_cols=360 Identities=32% Similarity=0.456 Sum_probs=281.3
Q ss_pred CCCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHH-----------hC
Q 004101 41 TLQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESL-----------QK 109 (773)
Q Consensus 41 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L-----------~~ 109 (773)
.+..|||+|++.... +.+.+.+++. +.++.+.|+ .|+||+++++++++++| ++
T Consensus 34 ~~~~~iV~~~~~~~~--------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~ 97 (539)
T 3afg_A 34 QEVSTIIMFDNQADK--------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQ 97 (539)
T ss_dssp CEEEEEEEESSHHHH--------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCC
T ss_pred CceEEEEEECCCCCH--------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccccccc
Confidence 345699999974321 1223334444 467899997 79999999999999999 89
Q ss_pred CCCeEEEEeCcccccccccC--cccccCCCCCCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccC
Q 004101 110 LPDVIAIRPDRRLQVQTTYS--YKFLGLSPTNGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEG 187 (773)
Q Consensus 110 ~p~V~~V~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g 187 (773)
+|+|++|++++.+++..... ...+.... ...+|..+.+|+||+|||||||||++||+|.
T Consensus 98 ~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~------------------ 158 (539)
T 3afg_A 98 LSGVQFIQEDYVVKVAVETEGLDESAAQVM-ATNMWNLGYDGSGITIGIIDTGIDASHPDLQ------------------ 158 (539)
T ss_dssp CTTEEEEEECCEEECC-----------CCB-CSCCBCCSCCCTTCEEEEEESBCCTTSGGGT------------------
T ss_pred CCCeeEEEecccccccCccccCCccccccC-cHhHHhcCCCCCCcEEEEEecCCCCCChHHh------------------
Confidence 99999999999987743221 00111111 5679999999999999999999999999996
Q ss_pred CCCCCCCCCCceeeeeecCCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCe
Q 004101 188 QSFNSSNCNRKLIGARFFTKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAH 267 (773)
Q Consensus 188 ~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~ 267 (773)
+++++.++|.++. ..+.|.+||||||||||||+... ..|.+.||||+|+
T Consensus 159 ---------~~i~~~~d~~~~~---------------~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~ 207 (539)
T 3afg_A 159 ---------GKVIGWVDFVNGK---------------TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAK 207 (539)
T ss_dssp ---------TTEEEEEETTTCC---------------SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCE
T ss_pred ---------CCEeeeEECCCCC---------------CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCE
Confidence 3466667775442 34678899999999999987422 1344689999999
Q ss_pred EeEEeeecCCC-CCHHHHHHHHHHhhhC----CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-
Q 004101 268 IAVYKVCWFNG-CYSSDILAAMDVAIRD----GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS- 341 (773)
Q Consensus 268 l~~~kv~~~~g-~~~~~i~~ai~~A~~~----g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~- 341 (773)
|+++|++++.| ++.+++++||+||+++ |++|||||||+.......+.+..++.++.++|++||+||||+|+...
T Consensus 208 l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~ 287 (539)
T 3afg_A 208 LVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYT 287 (539)
T ss_dssp EEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSC
T ss_pred EEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCc
Confidence 99999999877 7889999999999986 89999999998765455678888888999999999999999998643
Q ss_pred -ccccCCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccce
Q 004101 342 -SVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGK 420 (773)
Q Consensus 342 -~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gk 420 (773)
..+..++++|+|||++.+
T Consensus 288 ~~~Pa~~~~vitVgA~~~~------------------------------------------------------------- 306 (539)
T 3afg_A 288 VGSPAAASKVITVGAVDKY------------------------------------------------------------- 306 (539)
T ss_dssp CCTTTTCSSSEEEEEECTT-------------------------------------------------------------
T ss_pred ccCCccCCceEEEeeecCC-------------------------------------------------------------
Confidence 456678999999975311
Q ss_pred EEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeec
Q 004101 421 MVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIG 500 (773)
Q Consensus 421 ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 500 (773)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhC
Q 004101 501 RSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAY 580 (773)
Q Consensus 501 ~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 580 (773)
+.+++||||||+. ++++||||+|||++|+++++..... .+.....|..++|||||||||||++|||+|++
T Consensus 307 ----~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 376 (539)
T 3afg_A 307 ----DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVAGIAALLLQAH 376 (539)
T ss_dssp ----SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHC
T ss_pred ----cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHHHHHHHHHHHC
Confidence 1688999999998 8999999999999999998653210 01111369999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccCCCCCCcccCCCCCcccccCCCCccccC
Q 004101 581 PKWSPAAIKSAIMTTADGNDHFGKPIMDGNKPPAVKAINPGLIYDI 626 (773)
Q Consensus 581 P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~a~~~a~~~Glv~~~ 626 (773)
|+|++++||++|++||++++..+.+ ....+.|+|...
T Consensus 377 p~~s~~~vk~~L~~tA~~~~~~~~~---------~~~~G~G~vn~~ 413 (539)
T 3afg_A 377 PSWTPDKVKTALIETADIVKPDEIA---------DIAYGAGRVNAY 413 (539)
T ss_dssp TTCCHHHHHHHHHHHSBCSSGGGCS---------BTTTBTCBCCHH
T ss_pred CCCCHHHHHHHHHhhCccCCCCCCC---------ccCccCCccCHH
Confidence 9999999999999999987643322 234567777433
No 5
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=6.8e-59 Score=534.20 Aligned_cols=335 Identities=24% Similarity=0.262 Sum_probs=60.4
Q ss_pred CeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCccc
Q 004101 43 QTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDRRL 122 (773)
Q Consensus 43 ~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~ 122 (773)
++|||+||+...... ...+.+++...+.+. ....++.+.|++.|+||+++++++++++|+++|+|++|++++.+
T Consensus 76 g~YIV~lk~~~~~~~-~~~~~~~l~a~~~~~-----g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v 149 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV 149 (692)
T ss_dssp EEEEEEECTTCCHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred CcEEEEECCCCCHHH-HHHHHHHHHHHHhhc-----ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEecccc
Confidence 389999999876544 344445555544333 23468999999999999999999999999999999999999987
Q ss_pred ccccccCcccccCCCC-----CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCC
Q 004101 123 QVQTTYSYKFLGLSPT-----NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNR 197 (773)
Q Consensus 123 ~~~~~~s~~~~g~~~~-----~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~ 197 (773)
+.+ ...|++..+ ....|..+.+|+||+|+|||||||++||+|.++.. |. +|+
T Consensus 150 ~~~----~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~~------ 206 (692)
T 2p4e_P 150 FAQ----SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------DFE------ 206 (692)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred ccC----CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------ccc------
Confidence 642 123555442 12368888999999999999999999999985310 10 010
Q ss_pred ceeeeeecCCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCC
Q 004101 198 KLIGARFFTKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFN 277 (773)
Q Consensus 198 kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~ 277 (773)
+..+. ++ ......+.|.+||||||||||+|+. .||||+|+|+++||+++.
T Consensus 207 -------~~~d~---dg------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~ 256 (692)
T 2p4e_P 207 -------NVPEE---DG------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQ 256 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------cccCC---CC------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCC
Confidence 00000 00 0001246789999999999999874 699999999999999987
Q ss_pred C-CCHHHHHHHHHHhhhC------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCc
Q 004101 278 G-CYSSDILAAMDVAIRD------GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPW 349 (773)
Q Consensus 278 g-~~~~~i~~ai~~A~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~ 349 (773)
| ++.+++++||+|++++ |++|||||||+.... .+..++.++.++|++||+||||+|.+.. ..++..++
T Consensus 257 G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~s~----~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~ 332 (692)
T 2p4e_P 257 GKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYSR----VLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPE 332 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCCcH----HHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCC
Confidence 7 7888999999999986 899999999986433 4444555888999999999999998654 34777899
Q ss_pred eEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCC
Q 004101 350 IATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVN 429 (773)
Q Consensus 350 vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~ 429 (773)
+|+|||++.+...
T Consensus 333 vItVGA~d~~~~~------------------------------------------------------------------- 345 (692)
T 2p4e_P 333 VITVGATNAQDQP------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEcCCCCc-------------------------------------------------------------------
Confidence 9999986532210
Q ss_pred chhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCcccc
Q 004101 430 GRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQ 509 (773)
Q Consensus 430 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 509 (773)
...-+.
T Consensus 346 --------------------------------------------------------------------------a~~ss~ 351 (692)
T 2p4e_P 346 --------------------------------------------------------------------------VTLGTL 351 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 001123
Q ss_pred ccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHH
Q 004101 510 FSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIK 589 (773)
Q Consensus 510 fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik 589 (773)
||+||| ||||+|||++|+++++... ..|..++|||||||||||++|||++++|+|+|+|||
T Consensus 352 fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk 412 (692)
T 2p4e_P 352 GTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELR 412 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCC--------ceeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHH
Confidence 899998 4599999999999997632 578999999999999999999999999999999999
Q ss_pred HHHHhccccCC
Q 004101 590 SAIMTTADGND 600 (773)
Q Consensus 590 ~~L~~TA~~~~ 600 (773)
++|++||.+..
T Consensus 413 ~~L~~tA~~~~ 423 (692)
T 2p4e_P 413 QRLIHFSAKDV 423 (692)
T ss_dssp -----------
T ss_pred HHHHHhccccc
Confidence 99999998654
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=4.6e-56 Score=493.03 Aligned_cols=325 Identities=27% Similarity=0.386 Sum_probs=262.5
Q ss_pred CCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCcc
Q 004101 42 LQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDRR 121 (773)
Q Consensus 42 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~ 121 (773)
+.+|||+||+... . ++++++. +.++.++|. .+++|+++++++++++|+++|+|++|++++.
T Consensus 2 ~~~~iV~~~~~~~-------~----~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~ 62 (395)
T 2z2z_A 2 TIRVIVSVDKAKF-------N----PHEVLGI-------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQ 62 (395)
T ss_dssp EEEEEEEECTTTC-------C----HHHHHHT-------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCE
T ss_pred cEEEEEEECCCcc-------H----HHHHHHc-------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeee
Confidence 4689999998642 1 1233333 567899998 5999999999999999999999999999999
Q ss_pred cccccccC-----------cccccCCCC-CCCCcccCCCCCc--cEEEEEccCCCCCCCCCCCCCCCCCCCccccccccC
Q 004101 122 LQVQTTYS-----------YKFLGLSPT-NGGAWYESQFGHG--SIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEG 187 (773)
Q Consensus 122 ~~~~~~~s-----------~~~~g~~~~-~~~~~~~~~~G~g--v~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g 187 (773)
++++.... ...|++..+ ...+|..+ +|+| |+|||||||||++||+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~----------------- 124 (395)
T 2z2z_A 63 AVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA----------------- 124 (395)
T ss_dssp EEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGG-----------------
T ss_pred ecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhh-----------------
Confidence 87753321 123444322 56789988 9999 9999999999999999973
Q ss_pred CCCCCCCCCCceeeeeecCCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCe
Q 004101 188 QSFNSSNCNRKLIGARFFTKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAH 267 (773)
Q Consensus 188 ~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~ 267 (773)
++...++|..+... ....+..|.+||||||||||||.. ++ ..+.||||+|+
T Consensus 125 ----------~~~~~~~~~~~~~~----------~~~~~~~d~~gHGT~vAgiia~~~-n~--------~g~~GvAp~a~ 175 (395)
T 2z2z_A 125 ----------NIAWCVSTLRGKVS----------TKLRDCADQNGHGTHVIGTIAALN-ND--------IGVVGVAPGVQ 175 (395)
T ss_dssp ----------GEEEEEECGGGCCB----------CCHHHHBCSSSHHHHHHHHHHCCC-SS--------SSCCCSSTTCE
T ss_pred ----------ccccCccccCCccc----------CCCCCCCCCCCCHHHHHHHHHeec-CC--------CceEEECCCCE
Confidence 23444455433210 000124688999999999999973 11 12379999999
Q ss_pred EeEEeeecCCC-CCHHHHHHHHHHhhhC--------------------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCC
Q 004101 268 IAVYKVCWFNG-CYSSDILAAMDVAIRD--------------------GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHG 326 (773)
Q Consensus 268 l~~~kv~~~~g-~~~~~i~~ai~~A~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~G 326 (773)
|+.+|++++.| ++.+++++||+||+++ +++|||||||+... ...+..++.++.++|
T Consensus 176 l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~g 252 (395)
T 2z2z_A 176 IYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAG 252 (395)
T ss_dssp EEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTT
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCC
Confidence 99999999877 7889999999999988 99999999998642 345666667889999
Q ss_pred CEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCc
Q 004101 327 ISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEF 406 (773)
Q Consensus 327 i~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~ 406 (773)
++||+||||+|.....++...+++|+|||++.+
T Consensus 253 v~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------------------------------------- 285 (395)
T 2z2z_A 253 IVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN----------------------------------------------- 285 (395)
T ss_dssp CEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-----------------------------------------------
T ss_pred CEEEEECCCCCCCCCCCccCCCCEEEEEEecCC-----------------------------------------------
Confidence 999999999998877888889999999985411
Q ss_pred ccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCC
Q 004101 407 CLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTR 486 (773)
Q Consensus 407 c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 486 (773)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchh
Q 004101 487 RARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMAC 566 (773)
Q Consensus 487 ~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 566 (773)
+.+++||+||| +|+|||++|+++++. +.|..++||||||
T Consensus 286 ------------------~~~a~fS~~G~----------~v~APG~~i~s~~~~-------------~~y~~~sGTS~Aa 324 (395)
T 2z2z_A 286 ------------------DNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMAT 324 (395)
T ss_dssp ------------------SCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEEESHHHHH
T ss_pred ------------------CCCCcccCCCC----------CEEeCCCCeeeecCC-------------CceEecCCHHHHH
Confidence 26789999998 679999999999976 5899999999999
Q ss_pred hhhHHHHHHHHHhCC-------------CCCHHHHHHHHHhccccCCCCC
Q 004101 567 PHVSGITALIRSAYP-------------KWSPAAIKSAIMTTADGNDHFG 603 (773)
Q Consensus 567 P~VAG~aALl~~~~P-------------~~s~~~ik~~L~~TA~~~~~~g 603 (773)
|||||++|||+|++| +|++.+||++|++||++++..+
T Consensus 325 P~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g 374 (395)
T 2z2z_A 325 PHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG 374 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC
Confidence 999999999999999 9999999999999999886544
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3e-53 Score=477.10 Aligned_cols=383 Identities=22% Similarity=0.302 Sum_probs=276.2
Q ss_pred ccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccc
Q 004101 133 LGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRV 211 (773)
Q Consensus 133 ~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 211 (773)
|++..+ +..+|..+ |+||+|||||||||++||+|.++ ++..+++....
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~~~-- 54 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSGTG-- 54 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTTSC--
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCCCC--
Confidence 444333 56789865 77999999999999999999742 11111121110
Q ss_pred cCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCC--eEeEEeeecCCC-CCHHHHHHHH
Q 004101 212 ASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGA--HIAVYKVCWFNG-CYSSDILAAM 288 (773)
Q Consensus 212 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai 288 (773)
+...+.|..||||||||||+|.... . .+.||||+| +|+.+|++++.+ ++.+++++||
T Consensus 55 -----------~~~~~~d~~gHGT~vAgiia~~~~~--------~-g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai 114 (441)
T 1y9z_A 55 -----------NWYQPGNNNAHGTHVAGTIAAIANN--------E-GVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAI 114 (441)
T ss_dssp -----------CTTCCCSSCCHHHHHHHHHHCCCSS--------S-BCCCSSCSSCSEEEEEECEETTEECCSSCHHHHH
T ss_pred -----------CCCCCCCCCCcHHHHHHHHhcccCC--------C-CceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHH
Confidence 0124668899999999999997421 1 248999995 999999999877 7888999999
Q ss_pred HHhhhC-CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeE--
Q 004101 289 DVAIRD-GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAI-- 365 (773)
Q Consensus 289 ~~A~~~-g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~-- 365 (773)
+||+++ |+||||||||.... ...+..++.++.++|++||+||||+|.....++...+++|+|||++.+......
T Consensus 115 ~~a~~~~g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~ 191 (441)
T 1y9z_A 115 DTCVNSGGANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQ 191 (441)
T ss_dssp HHHHHTTCCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSC
T ss_pred HHHHHhcCCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcccc
Confidence 999999 99999999998742 234556667889999999999999999888889999999999999876542111
Q ss_pred -----------------EEeCCCe----EEeeeeccCCCCCCCCCceeE--EEEecCCCC-----CCCcccCC--CCCCC
Q 004101 366 -----------------VRMADGG----LLYGESMYPGNQFSKTEKELD--LIYVTGGDG-----GSEFCLKG--SLPIA 415 (773)
Q Consensus 366 -----------------~~~~~g~----~~~g~~~~~~~~~~~~~~~~~--lv~~~~~~~-----~~~~c~~~--~~~~~ 415 (773)
...+++. .+.|.+++....++. ...++ +.|...... ....|... .++..
T Consensus 192 ~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~-~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~ 270 (441)
T 1y9z_A 192 YTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPH-NRLTPSGTSYAPAPINASATGALAECTVNGTSFSCG 270 (441)
T ss_dssp CCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEEC-EEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECC
T ss_pred CCCceEEEeccCCeeccccCCCcccceeecccccccccccCcc-cccccCCccccccccccccccchhccccccccccCC
Confidence 1111221 222333322111010 00000 011000000 01457543 56778
Q ss_pred cccceEEEEecCCC-----chhhHHHHHHHcCceEEEEeccCCCCcc------cccccccccEEEEehhhHHHHHHHHhc
Q 004101 416 EVRGKMVVCDRGVN-----GRAEKGQVVKEAGGAAMILANTEINLEE------DSVDVHVLPATLVGFAESVRLKVYINS 484 (773)
Q Consensus 416 ~~~gkivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~ 484 (773)
+++|||++|+|+.+ .+.+|..+++++|+.|+|++++...... .......+|.+.++.++|+.|++|+..
T Consensus 271 ~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~ 350 (441)
T 1y9z_A 271 NMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQ 350 (441)
T ss_dssp CCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTS
T ss_pred CccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcC
Confidence 99999999999876 6789999999999999999988642111 122346799999999999999987632
Q ss_pred CCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccc
Q 004101 485 TRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSM 564 (773)
Q Consensus 485 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 564 (773)
. +++ ++.. ...|..+|||||
T Consensus 351 ~----~t~-------------------------------------------~~~~-------------~~~y~~~sGTSm 370 (441)
T 1y9z_A 351 S----TTV-------------------------------------------SNQG-------------NQDYEYYNGTSM 370 (441)
T ss_dssp E----EEE-------------------------------------------EEEE-------------EESEEEECSHHH
T ss_pred C----ccc-------------------------------------------cccc-------------CCCceeeccccc
Confidence 1 110 1111 158999999999
Q ss_pred hhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccCCCCCcccccCCCCccccCCccccccccccCCC
Q 004101 565 ACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFGKPIMDGNKPPAVKAINPGLIYDITPDEYVTHLCTLGY 640 (773)
Q Consensus 565 AaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~a~~~a~~~Glv~~~~~~dy~~~~~~~g~ 640 (773)
|||||||++|||+|+||+|+|++||++||+||++++..+.+ ..++.|||....+.||+.|||..++
T Consensus 371 AaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~~----------~~~G~G~vn~~~A~~~~~~lc~~~~ 436 (441)
T 1y9z_A 371 ATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGRD----------NQTGYGMINAVAAKAYLDESCTGPT 436 (441)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSSCB----------TTTBTCBCCHHHHHHHHHHCTTCC-
T ss_pred CCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCCCc----------ccccccccCHHHHHHHHHhhhcCCC
Confidence 99999999999999999999999999999999998876542 2468999999999999999999875
No 8
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.2e-53 Score=479.69 Aligned_cols=336 Identities=20% Similarity=0.281 Sum_probs=259.3
Q ss_pred CCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhC-CCCeEEEEeCc
Q 004101 42 LQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQK-LPDVIAIRPDR 120 (773)
Q Consensus 42 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~-~p~V~~V~~~~ 120 (773)
++.|||++++.. .+.+++++. +.++.+.|. .+++|+++++++++++|++ +|+|++|++++
T Consensus 44 ~~~yiv~~~~~~-----------~~~~~~~~~-------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~ 104 (471)
T 3t41_A 44 ELYYSVEYKNTA-----------TFNKLVKKK-------SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATC 104 (471)
T ss_dssp CEEEEEEESCHH-----------HHHHHHHHH-------TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECC
T ss_pred ceEEEEEcCCHH-----------HHHHHHHhC-------CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecc
Confidence 467999777522 234445444 567888886 5999999999999999999 99999999999
Q ss_pred ccccccccCc----------ccccCCCC--CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCC
Q 004101 121 RLQVQTTYSY----------KFLGLSPT--NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQ 188 (773)
Q Consensus 121 ~~~~~~~~s~----------~~~g~~~~--~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~ 188 (773)
.+++..+... ..|++..+ ...+|..+.+|+||+|||||||||++||+|.++- |.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~----- 172 (471)
T 3t41_A 105 STCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS----- 172 (471)
T ss_dssp SSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-----
T ss_pred eeccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-----
Confidence 8887543221 13444332 3368999999999999999999999999998531 1110
Q ss_pred CCCCCCCCCceeeeeecCCcccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeE
Q 004101 189 SFNSSNCNRKLIGARFFTKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHI 268 (773)
Q Consensus 189 ~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l 268 (773)
..++....|.... .....+...+.|..||||||||||||+. .+.||||+|+|
T Consensus 173 --------~~~~~~~~~~~~~--------~~~~~~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l 224 (471)
T 3t41_A 173 --------KNLVPLNGFRGTE--------PEETGDVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKF 224 (471)
T ss_dssp --------EECCCTTCGGGCC--------TTCCCCTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCE
T ss_pred --------cccccCCCccCCC--------cccCCCCCCCcCCCCccchhhheeecCC------------ceeEECCCCeE
Confidence 0011111111111 0111122357789999999999999863 14799999999
Q ss_pred eEEeeecCCCCCHHHHHHHHHHhhhCCCcEEEeccCCCCC-------------CCcccHHHHHHHHHHhCCCEEEEeCCC
Q 004101 269 AVYKVCWFNGCYSSDILAAMDVAIRDGVDVLSLSLGGFPL-------------PLFDDSIAIGSFRAMEHGISVVCAAGN 335 (773)
Q Consensus 269 ~~~kv~~~~g~~~~~i~~ai~~A~~~g~dVIn~SlG~~~~-------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN 335 (773)
+.+|++++.++..+++++||+||+++|++|||||||.... ....+.+..++..+.++|++||+||||
T Consensus 225 ~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN 304 (471)
T 3t41_A 225 TMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGN 304 (471)
T ss_dssp EEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 9999999866889999999999999999999999997410 022356777788889999999999999
Q ss_pred CCCCCC------------------ccccCCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEe
Q 004101 336 NGPLQS------------------SVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYV 397 (773)
Q Consensus 336 ~G~~~~------------------~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~ 397 (773)
+|.... ..++.++++|+|||++.+
T Consensus 305 ~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~-------------------------------------- 346 (471)
T 3t41_A 305 DGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK-------------------------------------- 346 (471)
T ss_dssp SCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT--------------------------------------
T ss_pred CCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC--------------------------------------
Confidence 997643 256678889999875411
Q ss_pred cCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHH
Q 004101 398 TGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVR 477 (773)
Q Consensus 398 ~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 477 (773)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCc----------------------eE
Q 004101 478 LKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVN----------------------II 535 (773)
Q Consensus 478 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~----------------------I~ 535 (773)
+.+++||++||+. |||+|||++ |+
T Consensus 347 ---------------------------~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~ 392 (471)
T 3t41_A 347 ---------------------------SNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENIL 392 (471)
T ss_dssp ---------------------------SSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEE
T ss_pred ---------------------------CCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeE
Confidence 2678999999963 599999987 88
Q ss_pred eccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCC-CCCHHHHHHHHHhccccCCC
Q 004101 536 AAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYP-KWSPAAIKSAIMTTADGNDH 601 (773)
Q Consensus 536 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~~s~~~ik~~L~~TA~~~~~ 601 (773)
++++. +.|..++|||||||||||++|||+|++| .++|++||++|++||++...
T Consensus 393 s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~ 446 (471)
T 3t41_A 393 TTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN 446 (471)
T ss_dssp EECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC
T ss_pred ecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC
Confidence 88875 5899999999999999999999999999 89999999999999997654
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=4.1e-52 Score=481.37 Aligned_cols=346 Identities=23% Similarity=0.284 Sum_probs=253.4
Q ss_pred CCCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCH----HHHHHHh--CCCCeE
Q 004101 41 TLQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTR----SELESLQ--KLPDVI 114 (773)
Q Consensus 41 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~----~~~~~L~--~~p~V~ 114 (773)
.+++|||+||+... .+++++.. +.++.+++. .+++++++++. +.+++|+ ++|+|+
T Consensus 30 ~~~~~IV~~k~~~~-----------~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 90 (671)
T 1r6v_A 30 TEGKILVGYNDRSE-----------VDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIR 90 (671)
T ss_dssp CTTEEEEEESSHHH-----------HHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEE
T ss_pred CCccEEEEECCCcC-----------HHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCce
Confidence 46899999997421 12233333 346777776 68999999875 3356676 489999
Q ss_pred EEEeCcccccccc---c------------------------CcccccCCCC-CCCC-cccCCCCCccEEEEEccCCCCCC
Q 004101 115 AIRPDRRLQVQTT---Y------------------------SYKFLGLSPT-NGGA-WYESQFGHGSIIGVLDTGIWPES 165 (773)
Q Consensus 115 ~V~~~~~~~~~~~---~------------------------s~~~~g~~~~-~~~~-~~~~~~G~gv~VaVIDTGid~~H 165 (773)
+|||+..+++... . ....|++..+ +..+ |+. .+|+||+|||||||||++|
T Consensus 91 ~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~H 169 (671)
T 1r6v_A 91 YVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTH 169 (671)
T ss_dssp EEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTS
T ss_pred EEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCC
Confidence 9999987654310 0 0123444332 4456 888 8999999999999999999
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCCcccccCCCCCCCCCccchhhhhcccc
Q 004101 166 PSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTS 245 (773)
Q Consensus 166 p~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~ 245 (773)
|+|.++ ++..+++..+.... ...+..|.+||||||||||||..
T Consensus 170 pdL~~~---------------------------~~~g~~~~~~~~~p----------~~~d~~d~~gHGThVAGiIAa~~ 212 (671)
T 1r6v_A 170 PDLEGQ---------------------------VIAGYRPAFDEELP----------AGTDSSYGGSAGTHVAGTIAAKK 212 (671)
T ss_dssp GGGTTT---------------------------BCCEEEGGGTEEEC----------TTCBCCTTCSHHHHHHHHHHCCC
T ss_pred cccccc---------------------------EEecccccCCCcCC----------CCCCCccCCCcchhhhhhhhccC
Confidence 999742 11111111110000 00224567899999999999973
Q ss_pred ccccccccCCCccccccccCCeEeEEeeecC------CC-CCHHHHHHHHHHhhhCCCcEEEeccCCCCCCCcccHHHHH
Q 004101 246 VSMASVLGNAGGVARGMAPGAHIAVYKVCWF------NG-CYSSDILAAMDVAIRDGVDVLSLSLGGFPLPLFDDSIAIG 318 (773)
Q Consensus 246 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~A~~~g~dVIn~SlG~~~~~~~~~~~~~a 318 (773)
. + ..+.||||+|+|+++|+++. .+ .....+++||+||+++|++|||||||+.. +...+..+
T Consensus 213 n-g--------~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~A 280 (671)
T 1r6v_A 213 D-G--------KGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEA 280 (671)
T ss_dssp S-S--------SSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHH
T ss_pred C-C--------CceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHH
Confidence 1 1 12479999999999999987 23 44667899999999999999999999864 23566777
Q ss_pred HHHHHhCCCEEEEeCCCCCCCC-CccccCCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEe
Q 004101 319 SFRAMEHGISVVCAAGNNGPLQ-SSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYV 397 (773)
Q Consensus 319 ~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~ 397 (773)
+.+|.++|+++|+||||+|... ..+|...|++|+|||++.+..
T Consensus 281 i~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------------------------------------ 324 (671)
T 1r6v_A 281 FDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------------------------------------ 324 (671)
T ss_dssp HHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT------------------------------------
T ss_pred HHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC------------------------------------
Confidence 7789999999999999999865 567788899999998542110
Q ss_pred cCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHH
Q 004101 398 TGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVR 477 (773)
Q Consensus 398 ~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~ 477 (773)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCC-----CCCCCc
Q 004101 478 LKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSS-----LPEDNR 552 (773)
Q Consensus 478 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~-----~~~~~~ 552 (773)
...+++||++||.. ||+|||++|+++++....... ......
T Consensus 325 --------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~ 370 (671)
T 1r6v_A 325 --------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATN 370 (671)
T ss_dssp --------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSS
T ss_pred --------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccC
Confidence 00478999999976 999999999999876421100 001122
Q ss_pred ccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCc
Q 004101 553 RVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFGKP 605 (773)
Q Consensus 553 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g~~ 605 (773)
.+.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..|.+
T Consensus 371 ~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~d 423 (671)
T 1r6v_A 371 GGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGWD 423 (671)
T ss_dssp SCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSCB
T ss_pred CCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCCC
Confidence 35899999999999999999999999999999999999999999998766543
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.7e-49 Score=419.54 Aligned_cols=250 Identities=34% Similarity=0.412 Sum_probs=201.8
Q ss_pred cccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCccc
Q 004101 132 FLGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHR 210 (773)
Q Consensus 132 ~~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 210 (773)
.|++..+ ...+|+.+..|+||+|||||||||++||+|.+ +++..++|.++.
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~~~- 63 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVDND- 63 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTTTB-
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccCCC-
Confidence 3555443 56799998888899999999999999999973 344555665432
Q ss_pred ccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHH
Q 004101 211 VASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMD 289 (773)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~ 289 (773)
.++.|..||||||||||+|...+. ..+.||||+|+|+.+|+++..+ +..+++++||+
T Consensus 64 --------------~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~ 121 (280)
T 1dbi_A 64 --------------YDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAII 121 (280)
T ss_dssp --------------SCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHH
T ss_pred --------------CCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHH
Confidence 235788999999999999975322 1247999999999999998877 78899999999
Q ss_pred HhhhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeC
Q 004101 290 VAIRDGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMA 369 (773)
Q Consensus 290 ~A~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~ 369 (773)
||+++|++|||||||... ..+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 122 ~a~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------- 188 (280)
T 1dbi_A 122 YAADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY---------- 188 (280)
T ss_dssp HHHHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT----------
T ss_pred HHHHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC----------
Confidence 999999999999999864 2356667777889999999999999998877788889999999985411
Q ss_pred CCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEe
Q 004101 370 DGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILA 449 (773)
Q Consensus 370 ~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 449 (773)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEe
Q 004101 450 NTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIA 529 (773)
Q Consensus 450 ~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~A 529 (773)
+.+++||++||.. ||+|
T Consensus 189 -------------------------------------------------------~~~~~~S~~G~~~--------dv~A 205 (280)
T 1dbi_A 189 -------------------------------------------------------DRLASFSNYGTWV--------DVVA 205 (280)
T ss_dssp -------------------------------------------------------SCBCTTBCCSTTC--------CEEE
T ss_pred -------------------------------------------------------CCcCCCCCCCCCc--------eEEE
Confidence 1678899999854 9999
Q ss_pred CCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCC
Q 004101 530 PGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHF 602 (773)
Q Consensus 530 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~ 602 (773)
||++|+++++. +.|..++|||||||||||++|||++ |++++.+||++|++||+++...
T Consensus 206 pG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~ 263 (280)
T 1dbi_A 206 PGVDIVSTITG-------------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT 263 (280)
T ss_dssp ECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB
T ss_pred ecCCeEeecCC-------------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC
Confidence 99999999875 5899999999999999999999987 8999999999999999988643
No 11
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=8e-49 Score=414.45 Aligned_cols=243 Identities=31% Similarity=0.455 Sum_probs=206.1
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
+..+|+.. +|+||+|||||||||++||+|.+ +++..++|.++.
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~~--------- 62 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDND--------- 62 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTTB---------
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccCCC---------
Confidence 55689887 79999999999999999999973 345555665432
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhCCCc
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRDGVD 297 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g~d 297 (773)
..+.|..||||||||||+|...+. ..+.||||+|+|+.+|+++..+ ++.+++++||+||+++|++
T Consensus 63 ------~~~~d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~ 128 (279)
T 1thm_A 63 ------STPQNGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAK 128 (279)
T ss_dssp ------SCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCS
T ss_pred ------CCCCCCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCC
Confidence 235788999999999999975322 1237999999999999998876 7788999999999999999
Q ss_pred EEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCeEEeee
Q 004101 298 VLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGE 377 (773)
Q Consensus 298 VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 377 (773)
|||||||.... .+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 129 Vin~S~G~~~~---~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------ 187 (279)
T 1thm_A 129 VISLSLGGTVG---NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------------ 187 (279)
T ss_dssp EEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT------------------
T ss_pred EEEEecCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC------------------
Confidence 99999998642 356667777889999999999999998877888889999999985411
Q ss_pred eccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcc
Q 004101 378 SMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEE 457 (773)
Q Consensus 378 ~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 457 (773)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEec
Q 004101 458 DSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAA 537 (773)
Q Consensus 458 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa 537 (773)
+.++.||++||.+ ||+|||++|+++
T Consensus 188 -----------------------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~ 212 (279)
T 1thm_A 188 -----------------------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYST 212 (279)
T ss_dssp -----------------------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEE
T ss_pred -----------------------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEE
Confidence 1678899999865 999999999999
Q ss_pred cCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCC
Q 004101 538 WPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFG 603 (773)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g 603 (773)
++. +.|..++|||||||||||++||| ++|.+++++||++|++||++++..+
T Consensus 213 ~~~-------------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~ 263 (279)
T 1thm_A 213 YPT-------------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG 263 (279)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT
T ss_pred eCC-------------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC
Confidence 876 58999999999999999999999 5899999999999999999987554
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=7.5e-49 Score=413.57 Aligned_cols=246 Identities=30% Similarity=0.445 Sum_probs=203.9
Q ss_pred ccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccc
Q 004101 133 LGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRV 211 (773)
Q Consensus 133 ~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 211 (773)
|+++.+ .+.+|..+++|+||+|+|||||||++||+|+ +...++|..+.
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~-- 54 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAGE-- 54 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTTC--
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCCC--
Confidence 444332 4568999999999999999999999999994 12233443321
Q ss_pred cCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHH
Q 004101 212 ASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDV 290 (773)
Q Consensus 212 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 290 (773)
....|..||||||||||+|... ...+.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 55 -------------~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~ 112 (274)
T 1r0r_E 55 -------------AYNTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEW 112 (274)
T ss_dssp -------------CTTCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred -------------CCCCCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHH
Confidence 2256789999999999998631 11237999999999999998877 778899999999
Q ss_pred hhhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCC----CccccCCCceEEEcCcCCCccceeEE
Q 004101 291 AIRDGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQ----SSVANIAPWIATVGASTLDRRFPAIV 366 (773)
Q Consensus 291 A~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 366 (773)
|++++++|||||||.... .+.+..++.++.++|+++|+||||+|... ..++...+++|+|||++.+
T Consensus 113 a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------- 182 (274)
T 1r0r_E 113 ATTNGMDVINMSLGGASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN------- 182 (274)
T ss_dssp HHHTTCSEEEECEEBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT-------
T ss_pred HHHcCCCEEEeCCCCCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC-------
Confidence 999999999999998642 35666777788999999999999999763 4466778899999975311
Q ss_pred EeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEE
Q 004101 367 RMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAM 446 (773)
Q Consensus 367 ~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 446 (773)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCc
Q 004101 447 ILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPD 526 (773)
Q Consensus 447 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPD 526 (773)
+.++.||++||. ||
T Consensus 183 ----------------------------------------------------------~~~~~~S~~G~~--------~d 196 (274)
T 1r0r_E 183 ----------------------------------------------------------SNRASFSSVGAE--------LE 196 (274)
T ss_dssp ----------------------------------------------------------SCBCTTCCCSTT--------EE
T ss_pred ----------------------------------------------------------CCcCccCCCCCC--------ce
Confidence 267889999985 49
Q ss_pred eEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 527 VIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 527 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
|+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 197 i~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g 257 (274)
T 1r0r_E 197 VMAPGAGVYSTYPT-------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG 257 (274)
T ss_dssp EEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS
T ss_pred EEeCCCCeEeecCC-------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC
Confidence 99999999999875 58999999999999999999999999999999999999999999874
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.2e-48 Score=410.59 Aligned_cols=239 Identities=33% Similarity=0.486 Sum_probs=203.4
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
.+.+|..+++|+||+|+|||||| .+||+|+ +...++|..+.
T Consensus 13 ~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~~--------- 53 (269)
T 1gci_A 13 APAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPGE--------- 53 (269)
T ss_dssp HHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTTC---------
T ss_pred cHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCCC---------
Confidence 45689999999999999999999 8999995 12233443321
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhCCCc
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRDGVD 297 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g~d 297 (773)
..+.|..||||||||||+|... ...+.||||+|+|+.+|+++..+ +..+++++||+||++++++
T Consensus 54 ------~~~~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~ 118 (269)
T 1gci_A 54 ------PSTQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMH 118 (269)
T ss_dssp ------CSCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCS
T ss_pred ------CCCCCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCe
Confidence 2356889999999999999731 11237999999999999998876 7788999999999999999
Q ss_pred EEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCeEEeee
Q 004101 298 VLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGE 377 (773)
Q Consensus 298 VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 377 (773)
|||||||.... ...+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 119 Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------ 177 (269)
T 1gci_A 119 VANLSLGSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------ 177 (269)
T ss_dssp EEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT------------------
T ss_pred EEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC------------------
Confidence 99999998642 345666777889999999999999998888888889999999985311
Q ss_pred eccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcc
Q 004101 378 SMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEE 457 (773)
Q Consensus 378 ~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 457 (773)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEec
Q 004101 458 DSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAA 537 (773)
Q Consensus 458 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa 537 (773)
+.+++||++||.+ ||+|||++|+++
T Consensus 178 -----------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~ 202 (269)
T 1gci_A 178 -----------------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQST 202 (269)
T ss_dssp -----------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEE
T ss_pred -----------------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEee
Confidence 1678899999965 999999999999
Q ss_pred cCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 538 WPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||++++
T Consensus 203 ~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g 252 (269)
T 1gci_A 203 YPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG 252 (269)
T ss_dssp ETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS
T ss_pred cCC-------------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 875 58999999999999999999999999999999999999999999875
No 14
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2e-48 Score=411.79 Aligned_cols=236 Identities=28% Similarity=0.434 Sum_probs=201.7
Q ss_pred CCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCC
Q 004101 140 GGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPN 219 (773)
Q Consensus 140 ~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 219 (773)
..+|..+.+|+||+|||||||||++||+|.+ +++..++|.++.
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~~---------- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGG---------------------------RSVSGYDFVDND---------- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTT---------------------------CEEEEEETTTTB----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcC---------------------------CccccccccCCC----------
Confidence 4689999999999999999999999999973 234445554432
Q ss_pred cccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhC--CC
Q 004101 220 IIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRD--GV 296 (773)
Q Consensus 220 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--g~ 296 (773)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|++++ ++
T Consensus 62 -----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~ 122 (284)
T 1sh7_A 62 -----ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGP 122 (284)
T ss_dssp -----SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSS
T ss_pred -----CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCC
Confidence 246788999999999999873 6999999999999998876 7888999999999974 79
Q ss_pred cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCceEEEcCcCCCccceeEEEeCCCeEEe
Q 004101 297 DVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPWIATVGASTLDRRFPAIVRMADGGLLY 375 (773)
Q Consensus 297 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~ 375 (773)
+|||||||... ...+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 123 ~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------- 182 (284)
T 1sh7_A 123 SVANMSLGGGQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS---------------- 182 (284)
T ss_dssp EEEEECCCBSC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT----------------
T ss_pred cEEEeCCCCCC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC----------------
Confidence 99999999873 355666777889999999999999997643 457778999999985411
Q ss_pred eeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCC
Q 004101 376 GESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINL 455 (773)
Q Consensus 376 g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 455 (773)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceE
Q 004101 456 EEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNII 535 (773)
Q Consensus 456 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~ 535 (773)
+.+++||++||.+ ||+|||++|+
T Consensus 183 -------------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~ 205 (284)
T 1sh7_A 183 -------------------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIK 205 (284)
T ss_dssp -------------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEE
T ss_pred -------------------------------------------------CCcCcccCCCCcc--------EEEeccCCeE
Confidence 2678899999965 9999999999
Q ss_pred eccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCC
Q 004101 536 AAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDH 601 (773)
Q Consensus 536 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~ 601 (773)
++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||++...
T Consensus 206 s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 206 SAWYD-------------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp EECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EecCC-------------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 99875 589999999999999999999999999999999999999999998654
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=6e-49 Score=424.40 Aligned_cols=253 Identities=29% Similarity=0.422 Sum_probs=203.8
Q ss_pred cccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCccc
Q 004101 132 FLGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHR 210 (773)
Q Consensus 132 ~~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~ 210 (773)
.|++..+ +..+|..+++|+||+|||||||||++||+|.+ +++..++|..++.
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~~~ 74 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTDYG 74 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSGGG
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCCCC
Confidence 4554432 56799999999999999999999999999972 3555566655431
Q ss_pred ccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHH
Q 004101 211 VASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMD 289 (773)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~ 289 (773)
. +.....|..||||||||||+|... + ..+.||||+|+|+.+|+++..+ +..+++++||+
T Consensus 75 ~-----------~~~~~~d~~gHGT~VAgiia~~~~-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~ 134 (327)
T 2x8j_A 75 G-----------DETNFSDNNGHGTHVAGTVAAAET-G--------SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIR 134 (327)
T ss_dssp G-----------CTTCCCCSSSHHHHHHHHHHCCCC-S--------SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHH
T ss_pred C-----------CCCCCCCCCCchHHHHHHHhccCC-C--------CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHH
Confidence 1 012356889999999999999731 1 1247999999999999998877 78889999999
Q ss_pred Hhhh------CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCC-----CccccCCCceEEEcCcCC
Q 004101 290 VAIR------DGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQ-----SSVANIAPWIATVGASTL 358 (773)
Q Consensus 290 ~A~~------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgA~~~ 358 (773)
||++ .+++|||||||.... ...+..++.++.++|++||+||||+|... ..+|...+++|+|||++.
T Consensus 135 ~a~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~ 211 (327)
T 2x8j_A 135 YAVDWRGPKGEQMRIITMSLGGPTD---SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF 211 (327)
T ss_dssp HHHHCCCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT
T ss_pred HHHhhcccccCCceEEEECCCcCCC---CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC
Confidence 9999 899999999998642 35566677788999999999999999752 456777899999998541
Q ss_pred CccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHH
Q 004101 359 DRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVV 438 (773)
Q Consensus 359 ~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 438 (773)
+
T Consensus 212 ~------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 212 D------------------------------------------------------------------------------- 212 (327)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCC
Q 004101 439 KEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLY 518 (773)
Q Consensus 439 ~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~ 518 (773)
+.++.||++||.
T Consensus 213 ------------------------------------------------------------------~~~~~fS~~G~~-- 224 (327)
T 2x8j_A 213 ------------------------------------------------------------------LRLSDFTNTNEE-- 224 (327)
T ss_dssp ------------------------------------------------------------------CCBSCC---CCC--
T ss_pred ------------------------------------------------------------------CCCCCccCCCCC--
Confidence 267889999984
Q ss_pred CCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHh-----CCCCCHHHHHHHHH
Q 004101 519 TPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSA-----YPKWSPAAIKSAIM 593 (773)
Q Consensus 519 ~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~s~~~ik~~L~ 593 (773)
|||+|||++|+++++. +.|..++|||||||||||++|||+|+ +|.+++.+||++|+
T Consensus 225 ------~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~ 285 (327)
T 2x8j_A 225 ------IDIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLV 285 (327)
T ss_dssp ------CSEEEECSSEEEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ------ceEecCcCceEeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHH
Confidence 5999999999999875 57999999999999999999999999 99999999999999
Q ss_pred hccccCC
Q 004101 594 TTADGND 600 (773)
Q Consensus 594 ~TA~~~~ 600 (773)
+||++++
T Consensus 286 ~tA~~~g 292 (327)
T 2x8j_A 286 RRATPIG 292 (327)
T ss_dssp TTEECCS
T ss_pred HhCccCC
Confidence 9999875
No 16
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3.2e-48 Score=416.98 Aligned_cols=269 Identities=30% Similarity=0.380 Sum_probs=213.1
Q ss_pred ccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccc
Q 004101 133 LGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRV 211 (773)
Q Consensus 133 ~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 211 (773)
|+++.+ +..+|..+.+|+||+|||||||||++||+|.+ ++...++|.....
T Consensus 8 W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~---------------------------~~~~~~~~~~~~~- 59 (310)
T 2ixt_A 8 WGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDFTGATT- 59 (310)
T ss_dssp HHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEESSSSSS-
T ss_pred CchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhh---------------------------cccccccccCCCC-
Confidence 444332 56799999999999999999999999999973 2344455543311
Q ss_pred cCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHH
Q 004101 212 ASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDV 290 (773)
Q Consensus 212 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 290 (773)
.......|..||||||||||+|.... +...+.||||+|+|+.+|++++.+ ++.+++++||+|
T Consensus 60 ----------~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~ 122 (310)
T 2ixt_A 60 ----------PINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRH 122 (310)
T ss_dssp ----------CEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred ----------CCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHH
Confidence 01123568899999999999997421 122347999999999999998876 688899999999
Q ss_pred hhhCCC-----cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCC--CCccccCCCceEEEcCcCCCccce
Q 004101 291 AIRDGV-----DVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPL--QSSVANIAPWIATVGASTLDRRFP 363 (773)
Q Consensus 291 A~~~g~-----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~~p~vitVgA~~~~~~~~ 363 (773)
|+++++ +|||||||.... ...+..++.++.++|++||+||||+|.. ...++...+++|+|||++....
T Consensus 123 a~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~-- 197 (310)
T 2ixt_A 123 AADQATATGTKTIISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ-- 197 (310)
T ss_dssp HHHHHHHHTCCEEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--
T ss_pred HHHhhhccCCCeEEEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--
Confidence 999988 999999998742 3456667778899999999999999976 3456777899999998531000
Q ss_pred eEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCc
Q 004101 364 AIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGG 443 (773)
Q Consensus 364 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga 443 (773)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCC----
Q 004101 444 AAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYT---- 519 (773)
Q Consensus 444 ~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~---- 519 (773)
.....++.||++||....
T Consensus 198 ----------------------------------------------------------~g~~~~~~~S~~G~~~~~g~~~ 219 (310)
T 2ixt_A 198 ----------------------------------------------------------NGTYRVADYSSRGYISTAGDYV 219 (310)
T ss_dssp ----------------------------------------------------------TTEEEECTTSCCCCTTTTTSSS
T ss_pred ----------------------------------------------------------CCCeeeccccCCCCccCCcccc
Confidence 000057889999995321
Q ss_pred CCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 004101 520 PTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGN 599 (773)
Q Consensus 520 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~ 599 (773)
..+.||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++
T Consensus 220 ~~~~~~di~ApG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 286 (310)
T 2ixt_A 220 IQEGDIEISAPGSSVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSV 286 (310)
T ss_dssp CCTTCCCEEEECSSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTS
T ss_pred ccCCCeeEECCCCCEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCccc
Confidence 123599999999999999875 5799999999999999999999999999999999999999999988
Q ss_pred CCC
Q 004101 600 DHF 602 (773)
Q Consensus 600 ~~~ 602 (773)
+..
T Consensus 287 ~~~ 289 (310)
T 2ixt_A 287 DIK 289 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 17
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2e-48 Score=411.57 Aligned_cols=247 Identities=31% Similarity=0.444 Sum_probs=203.4
Q ss_pred ccCCCC-CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccc
Q 004101 133 LGLSPT-NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRV 211 (773)
Q Consensus 133 ~g~~~~-~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 211 (773)
|++..+ ...+|..+++|+||+|||||||||++||+|+. ...++|..+.
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~~-- 54 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPSE-- 54 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTTC--
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCCC--
Confidence 444332 45689999999999999999999999999951 1223333221
Q ss_pred cCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHH
Q 004101 212 ASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDV 290 (773)
Q Consensus 212 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ 290 (773)
..+..|..||||||||||+|... ...+.||||+|+|+.+|+++..+ +..++++++|+|
T Consensus 55 ------------~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 113 (281)
T 1to2_E 55 ------------TNPFQDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEW 113 (281)
T ss_dssp ------------CCTTCCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHH
Confidence 01236789999999999999731 11247999999999999998877 778899999999
Q ss_pred hhhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCC----CccccCCCceEEEcCcCCCccceeEE
Q 004101 291 AIRDGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQ----SSVANIAPWIATVGASTLDRRFPAIV 366 (773)
Q Consensus 291 A~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 366 (773)
|++++++|||||||.... .+.+..++.++.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 114 a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------- 183 (281)
T 1to2_E 114 AIANNMDVINMSLGGPSG---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS------- 183 (281)
T ss_dssp HHHTTCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT-------
T ss_pred HHHCCCcEEEECCcCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC-------
Confidence 999999999999998642 35667777788999999999999999762 4567778899999975311
Q ss_pred EeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEE
Q 004101 367 RMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAM 446 (773)
Q Consensus 367 ~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 446 (773)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCc
Q 004101 447 ILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPD 526 (773)
Q Consensus 447 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPD 526 (773)
+.++.||++||.+ |
T Consensus 184 ----------------------------------------------------------~~~~~fS~~G~~~--------d 197 (281)
T 1to2_E 184 ----------------------------------------------------------NQRASFSSVGPEL--------D 197 (281)
T ss_dssp ----------------------------------------------------------SCBCTTCCCSTTC--------C
T ss_pred ----------------------------------------------------------CCcCCcCCCCCCc--------e
Confidence 2678899999954 9
Q ss_pred eEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 527 VIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 527 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
|+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||++++
T Consensus 198 i~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g 258 (281)
T 1to2_E 198 VMAPGVSIQSTLPG-------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG 258 (281)
T ss_dssp EEEECSSEEEEETT-------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS
T ss_pred EEecCCCeEeecCC-------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC
Confidence 99999999999875 58999999999999999999999999999999999999999999875
No 18
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=4.5e-50 Score=438.74 Aligned_cols=285 Identities=19% Similarity=0.221 Sum_probs=185.9
Q ss_pred CCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCC
Q 004101 140 GGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPN 219 (773)
Q Consensus 140 ~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 219 (773)
..+|+.+..|++|+|||||||||++||+|.+....++...|+..++........ .+..+.. ....+....... ..
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~--~~ 95 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRD--QGLKGKEKEEAL--EA 95 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHH--HTCCSHHHHHHH--HH
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccC--cccccccccccc--cc
Confidence 358999999999999999999999999999877777777787654432110000 0000000 000000000000 00
Q ss_pred cccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC------CCHHHHHHHHHHhhh
Q 004101 220 IIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG------CYSSDILAAMDVAIR 293 (773)
Q Consensus 220 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~A~~ 293 (773)
...+..++.|.+||||||||||||+.. +.+.||||+|+|+.+|++.... ....++++||+||++
T Consensus 96 ~~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~ 165 (357)
T 4h6x_A 96 VIPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALE 165 (357)
T ss_dssp HCTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHH
Confidence 001112356788999999999999741 2247999999999999975421 345578899999999
Q ss_pred CCCcEEEeccCCCC-CCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCe
Q 004101 294 DGVDVLSLSLGGFP-LPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGG 372 (773)
Q Consensus 294 ~g~dVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~ 372 (773)
.|++|||||||... .....+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 166 ~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------- 232 (357)
T 4h6x_A 166 LGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD------------- 232 (357)
T ss_dssp TTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-------------
T ss_pred cCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-------------
Confidence 99999999999864 3344567777788899999999999999998888888889999999985421
Q ss_pred EEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccC
Q 004101 373 LLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTE 452 (773)
Q Consensus 373 ~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~ 452 (773)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCC
Q 004101 453 INLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGV 532 (773)
Q Consensus 453 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~ 532 (773)
+.+++|||||+.. .||||+|||+
T Consensus 233 ----------------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~ 255 (357)
T 4h6x_A 233 ----------------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGE 255 (357)
T ss_dssp ----------------------------------------------------SSBCTTCC---CT-----TTTEEEEECS
T ss_pred ----------------------------------------------------CcccccccCCCCC-----CccceeecCC
Confidence 2678999999754 5899999999
Q ss_pred ceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCC
Q 004101 533 NIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSA----YPKWSPAAIKSAIMTTADGNDH 601 (773)
Q Consensus 533 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~s~~~ik~~L~~TA~~~~~ 601 (773)
+|+++++.. +.|..++|||||||||||++|||+++ +|.|+++|||++|++||++++.
T Consensus 256 ~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~ 316 (357)
T 4h6x_A 256 EILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDP 316 (357)
T ss_dssp SEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------
T ss_pred CeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCC
Confidence 999998764 46788999999999999999999965 5689999999999999998764
No 19
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.5e-48 Score=407.26 Aligned_cols=237 Identities=29% Similarity=0.426 Sum_probs=200.5
Q ss_pred CCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCC
Q 004101 140 GGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPN 219 (773)
Q Consensus 140 ~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 219 (773)
..+|..+++|+||+|+|||||||++||+|.+ ++...++|.++.
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~---------------------------~~~~~~d~~~~~---------- 63 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGG---------------------------RASSGYDFIDND---------- 63 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETTTTB----------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhc---------------------------ccccCeecCCCC----------
Confidence 4589999999999999999999999999973 233445554321
Q ss_pred cccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhh--CCC
Q 004101 220 IIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIR--DGV 296 (773)
Q Consensus 220 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~--~g~ 296 (773)
.++.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++ .++
T Consensus 64 -----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~ 124 (278)
T 2b6n_A 64 -----YDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGP 124 (278)
T ss_dssp -----SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSS
T ss_pred -----CCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCC
Confidence 235788999999999999863 6999999999999998876 788899999999997 599
Q ss_pred cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCceEEEcCcCCCccceeEEEeCCCeEEe
Q 004101 297 DVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPWIATVGASTLDRRFPAIVRMADGGLLY 375 (773)
Q Consensus 297 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~ 375 (773)
+|||||||... .+.+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 125 ~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------- 184 (278)
T 2b6n_A 125 AVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN---------------- 184 (278)
T ss_dssp EEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------------
T ss_pred eEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC----------------
Confidence 99999999864 345666667888999999999999997654 356778999999985311
Q ss_pred eeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCC
Q 004101 376 GESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINL 455 (773)
Q Consensus 376 g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 455 (773)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceE
Q 004101 456 EEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNII 535 (773)
Q Consensus 456 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~ 535 (773)
+.++.||++||.. ||+|||++|+
T Consensus 185 -------------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~ 207 (278)
T 2b6n_A 185 -------------------------------------------------DSRSSFSNYGTCL--------DIYAPGSSIT 207 (278)
T ss_dssp -------------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEE
T ss_pred -------------------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeE
Confidence 1678899999854 9999999999
Q ss_pred eccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 536 AAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 536 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
++++... +.|..++|||||||||||++|||+|++|+|++.|||++|++||++..
T Consensus 208 s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 208 SSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp EECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9986532 57999999999999999999999999999999999999999998754
No 20
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=4.9e-48 Score=408.34 Aligned_cols=239 Identities=30% Similarity=0.401 Sum_probs=203.1
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
...+|..+.+|+||+|||||||||++||+|.+ ++...++|..
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~----------- 61 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGG---------------------------RARVGYDALG----------- 61 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETTS-----------
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHcc---------------------------CeeccccCCC-----------
Confidence 45689999999999999999999999999973 2333344433
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhC--C
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRD--G 295 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--g 295 (773)
....|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..++++++|+|+++. +
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~ 121 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRR 121 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCS
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCC
Confidence 235678999999999999873 6999999999999998877 7888999999999987 8
Q ss_pred CcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCc-cccCCCceEEEcCcCCCccceeEEEeCCCeEE
Q 004101 296 VDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSS-VANIAPWIATVGASTLDRRFPAIVRMADGGLL 374 (773)
Q Consensus 296 ~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 374 (773)
++|||||||... ...+..++.++.++|+++|+||||+|..... .+...+++|+|||++.+
T Consensus 122 ~~vin~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------- 182 (276)
T 4dzt_A 122 PAVANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS--------------- 182 (276)
T ss_dssp SEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------
T ss_pred CeEEEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC---------------
Confidence 999999999764 3556667778899999999999999976544 37778999999975311
Q ss_pred eeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCC
Q 004101 375 YGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEIN 454 (773)
Q Consensus 375 ~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 454 (773)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCce
Q 004101 455 LEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNI 534 (773)
Q Consensus 455 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I 534 (773)
+.+++||++||.. ||+|||++|
T Consensus 183 --------------------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i 204 (276)
T 4dzt_A 183 --------------------------------------------------DARASFSNYGSCV--------DLFAPGASI 204 (276)
T ss_dssp --------------------------------------------------SBBCTTCCBSTTC--------CEEEECSSE
T ss_pred --------------------------------------------------CCcCCcCCCCCCc--------eEEeCCCCe
Confidence 2678899999976 999999999
Q ss_pred EeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCC
Q 004101 535 IAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFG 603 (773)
Q Consensus 535 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g 603 (773)
+++++... ..|..++|||||||+|||++|||+|++|++++++||++|++||++....+
T Consensus 205 ~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 262 (276)
T 4dzt_A 205 PSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLSG 262 (276)
T ss_dssp EEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCBS
T ss_pred EccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccCC
Confidence 99987642 57999999999999999999999999999999999999999999876443
No 21
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.3e-47 Score=413.40 Aligned_cols=254 Identities=32% Similarity=0.450 Sum_probs=207.5
Q ss_pred cccCCCC-CCCCcccCCCCC--ccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCc
Q 004101 132 FLGLSPT-NGGAWYESQFGH--GSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKG 208 (773)
Q Consensus 132 ~~g~~~~-~~~~~~~~~~G~--gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~ 208 (773)
.|++..+ +..+|+.+ +|+ ||+|||||||||++||+|.+ ++...++|..+
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~ 60 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCVSTLRG 60 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEEECGGG
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc---------------------------ccccCccccCC
Confidence 3444433 67799988 999 99999999999999999973 23444444433
Q ss_pred ccccCCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHH
Q 004101 209 HRVASTTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAA 287 (773)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~a 287 (773)
... ....+..|..||||||||||+|.. + ...+.||||+|+|+.+|+++..| +..+++++|
T Consensus 61 ~~~----------~~~~~~~d~~gHGT~vAgiia~~~-n--------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~a 121 (320)
T 2z30_A 61 KVS----------TKLRDCADQNGHGTHVIGTIAALN-N--------DIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIG 121 (320)
T ss_dssp CCB----------CCHHHHBCSSSHHHHHHHHHHCCS-S--------SBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHH
T ss_pred ccC----------CCCCCCCCCCCCHHHHHHHHHccc-C--------CCceEeeCCCCEEEEEEeeCCCCCccHHHHHHH
Confidence 210 000124678999999999999962 1 11237999999999999998877 778899999
Q ss_pred HHHhhhC--------------------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCC
Q 004101 288 MDVAIRD--------------------GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIA 347 (773)
Q Consensus 288 i~~A~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~ 347 (773)
|+||++. +++|||||||.... ...+..++.++.++|++||+||||+|.....++...
T Consensus 122 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~ 198 (320)
T 2z30_A 122 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAY 198 (320)
T ss_dssp HHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTS
T ss_pred HHHHHhCcccccccccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccC
Confidence 9999987 99999999998742 345566667889999999999999998877888889
Q ss_pred CceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecC
Q 004101 348 PWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRG 427 (773)
Q Consensus 348 p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g 427 (773)
|++|+|||++.+
T Consensus 199 ~~vi~Vga~~~~-------------------------------------------------------------------- 210 (320)
T 2z30_A 199 PEVIAVGAIDSN-------------------------------------------------------------------- 210 (320)
T ss_dssp TTEEEEEEECTT--------------------------------------------------------------------
T ss_pred CCeEEEEeeCCC--------------------------------------------------------------------
Confidence 999999985411
Q ss_pred CCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCcc
Q 004101 428 VNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAV 507 (773)
Q Consensus 428 ~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 507 (773)
+.+
T Consensus 211 -----------------------------------------------------------------------------~~~ 213 (320)
T 2z30_A 211 -----------------------------------------------------------------------------DNI 213 (320)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 167
Q ss_pred ccccCCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhC-------
Q 004101 508 AQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAY------- 580 (773)
Q Consensus 508 a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~------- 580 (773)
++||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 214 ~~~S~~g~----------~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~ 270 (320)
T 2z30_A 214 ASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKI 270 (320)
T ss_dssp CTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CcccCCCC----------CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccc
Confidence 88999997 789999999999875 589999999999999999999999999
Q ss_pred ------CCCCHHHHHHHHHhccccCCCCC
Q 004101 581 ------PKWSPAAIKSAIMTTADGNDHFG 603 (773)
Q Consensus 581 ------P~~s~~~ik~~L~~TA~~~~~~g 603 (773)
|+|++.+||++|++||+++...+
T Consensus 271 ~~~~~~p~lt~~~v~~~L~~ta~~~~~~g 299 (320)
T 2z30_A 271 LPVGTFDDISKNTVRGILHITADDLGPTG 299 (320)
T ss_dssp CCCCCTTCCSTTSHHHHHHHHSBCCSSSS
T ss_pred cccccCCCCCHHHHHHHHHhhCccCCCCC
Confidence 99999999999999999886544
No 22
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.1e-47 Score=407.07 Aligned_cols=243 Identities=24% Similarity=0.278 Sum_probs=195.6
Q ss_pred CCCC-CccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCCccccc
Q 004101 146 SQFG-HGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPNIIQEY 224 (773)
Q Consensus 146 ~~~G-~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 224 (773)
.++| +||+|||||||||++||+|.+. ++..+++.... ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~~-------------~~ 42 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAPT-------------AA 42 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSCC-------------CC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCCC-------------CC
Confidence 3578 6999999999999999999742 11111111111 00
Q ss_pred CCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC--CCHHHHHHHHHHhhhCCCcEEEec
Q 004101 225 VSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG--CYSSDILAAMDVAIRDGVDVLSLS 302 (773)
Q Consensus 225 ~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~g~dVIn~S 302 (773)
....|.+||||||||||+|+.. ..+.||||+|+|+.+|++.+.+ .+..++++||+||++.+++|||||
T Consensus 43 ~~d~~~~gHGT~VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S 112 (282)
T 3zxy_A 43 RSDGFMSAHGTHVASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINIS 112 (282)
T ss_dssp CTTCHHHHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCCcccceeehhhccCC----------ceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEecc
Confidence 2234567999999999998742 1247999999999999987643 677889999999999999999999
Q ss_pred cCCCC-CCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccC
Q 004101 303 LGGFP-LPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYP 381 (773)
Q Consensus 303 lG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~ 381 (773)
||... .......+..++..+.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 113 ~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------------- 170 (282)
T 3zxy_A 113 GGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH---------------------- 170 (282)
T ss_dssp CCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT----------------------
T ss_pred CccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC----------------------
Confidence 99753 2333456667777889999999999999999888888889999999985411
Q ss_pred CCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccccc
Q 004101 382 GNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVD 461 (773)
Q Consensus 382 ~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 461 (773)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEeccCCC
Q 004101 462 VHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQN 541 (773)
Q Consensus 462 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~ 541 (773)
+.++.||+||+. ..||||+|||.+|+++++.
T Consensus 171 -------------------------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~- 201 (282)
T 3zxy_A 171 -------------------------------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPG- 201 (282)
T ss_dssp -------------------------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT-
T ss_pred -------------------------------------------CccccccCCCCC-----ccccceeccCcceeeecCC-
Confidence 267789999875 3689999999999999876
Q ss_pred CCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhC----CCCCHHHHHHHHHhccccCCC
Q 004101 542 LGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAY----PKWSPAAIKSAIMTTADGNDH 601 (773)
Q Consensus 542 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----P~~s~~~ik~~L~~TA~~~~~ 601 (773)
+.|..++|||||||||||++|||++++ |.++|+|||++|++||++++.
T Consensus 202 ------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~ 253 (282)
T 3zxy_A 202 ------------GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD 253 (282)
T ss_dssp ------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--
T ss_pred ------------CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC
Confidence 579999999999999999999999875 789999999999999998754
No 23
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.1e-47 Score=419.26 Aligned_cols=254 Identities=21% Similarity=0.148 Sum_probs=205.4
Q ss_pred CCCCcccCCCCC--ccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCC
Q 004101 139 NGGAWYESQFGH--GSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTM 216 (773)
Q Consensus 139 ~~~~~~~~~~G~--gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~ 216 (773)
...+|+. .+|+ ||+||||||||| +||+|.+ +++..++|.++..
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~---------------------------~~~~~~~~~~~~~------ 76 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD---------------------------SEFAKFSFTQDGS------ 76 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT---------------------------CEEEEEECBTTCC------
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc---------------------------CcccCCcccCCCC------
Confidence 5678988 8999 999999999999 9999973 2444455543311
Q ss_pred CCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHHHHHHHhhhC--
Q 004101 217 SPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIRD-- 294 (773)
Q Consensus 217 ~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~-- 294 (773)
+.+...+.|..||||||||||+|.. | +.||||+|+|+.+|++++.+.. ++++||+||+++
T Consensus 77 ----~~~~~~~~d~~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~ 138 (347)
T 2iy9_A 77 ----PFPVKKSEALYIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVF 138 (347)
T ss_dssp ----SSCCSSSHHHHHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTT
T ss_pred ----CCCCCCCCCCCCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhh
Confidence 1111246788999999999999871 2 2799999999999999875543 899999999999
Q ss_pred ----CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCC-------CCccccCCC----------ceEEE
Q 004101 295 ----GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPL-------QSSVANIAP----------WIATV 353 (773)
Q Consensus 295 ----g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p----------~vitV 353 (773)
|++|||||||........+.+..++..+.++|++||+||||+|.. ...++...+ ++|+|
T Consensus 139 ~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~V 218 (347)
T 2iy9_A 139 LAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRV 218 (347)
T ss_dssp SCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEE
T ss_pred cccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEE
Confidence 999999999987544456777888888999999999999999975 456777778 99999
Q ss_pred cCcCC--CccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCch
Q 004101 354 GASTL--DRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGR 431 (773)
Q Consensus 354 gA~~~--~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~ 431 (773)
||++. +....
T Consensus 219 ga~~~~~~g~~~-------------------------------------------------------------------- 230 (347)
T 2iy9_A 219 AALAQYRKGETP-------------------------------------------------------------------- 230 (347)
T ss_dssp EEECCCCTTSCC--------------------------------------------------------------------
T ss_pred EEcccCCCCcee--------------------------------------------------------------------
Confidence 98653 11000
Q ss_pred hhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCcccccc
Q 004101 432 AEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFS 511 (773)
Q Consensus 432 ~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS 511 (773)
...+..+.||
T Consensus 231 ----------------------------------------------------------------------~~~~~~~~fS 240 (347)
T 2iy9_A 231 ----------------------------------------------------------------------VLHGGGITGS 240 (347)
T ss_dssp ----------------------------------------------------------------------CBCCCSSSCB
T ss_pred ----------------------------------------------------------------------cccCCCCCCC
Confidence 0011567999
Q ss_pred CCCCCCCCCCcccCceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHH
Q 004101 512 ARGPSLYTPTILKPDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSA 591 (773)
Q Consensus 512 s~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~ 591 (773)
++||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++
T Consensus 241 ~~G~~-------~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~ 300 (347)
T 2iy9_A 241 RFGNN-------WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRT 300 (347)
T ss_dssp CBCTT-------TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred CCCCC-------CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99995 67999999999999975 58999999999999999999999999999999999999
Q ss_pred HHhccccCCCCC
Q 004101 592 IMTTADGNDHFG 603 (773)
Q Consensus 592 L~~TA~~~~~~g 603 (773)
|++||++++..+
T Consensus 301 L~~tA~~~~~~~ 312 (347)
T 2iy9_A 301 LLESADKYPSLV 312 (347)
T ss_dssp HHHHSEECGGGT
T ss_pred HHHhCccCCCCC
Confidence 999999886543
No 24
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.6e-47 Score=402.23 Aligned_cols=228 Identities=35% Similarity=0.447 Sum_probs=194.5
Q ss_pred CcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCCcc
Q 004101 142 AWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPNII 221 (773)
Q Consensus 142 ~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 221 (773)
.|. ..+|+||+|+|||||||++||+|.+ ++...++|.+
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~---------------------------~~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEG---------------------------RAQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhC---------------------------ccccccCCCC--------------
Confidence 344 3789999999999999999999973 2333444431
Q ss_pred cccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhCCC----
Q 004101 222 QEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRDGV---- 296 (773)
Q Consensus 222 ~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g~---- 296 (773)
.+.|..||||||||||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|++++++
T Consensus 62 ----~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~ 123 (279)
T 2pwa_A 62 ----SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNC 123 (279)
T ss_dssp ----CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCC
T ss_pred ----CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccC
Confidence 25678999999999999863 6999999999999999877 888999999999999887
Q ss_pred ---cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCceEEEcCcCCCccceeEEEeCCCe
Q 004101 297 ---DVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPWIATVGASTLDRRFPAIVRMADGG 372 (773)
Q Consensus 297 ---dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~ 372 (773)
+|||||||... .+.+..++.++.++|++||+||||+|.... .+|...+++|+|||++.+
T Consensus 124 ~~~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------- 186 (279)
T 2pwa_A 124 PKGVVASLSLGGGY----SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY------------- 186 (279)
T ss_dssp TTEEEEEECCCEEC----CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------
T ss_pred CCccEEEecCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC-------------
Confidence 99999999763 356666777889999999999999998653 457778999999985411
Q ss_pred EEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccC
Q 004101 373 LLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTE 452 (773)
Q Consensus 373 ~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~ 452 (773)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCC
Q 004101 453 INLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGV 532 (773)
Q Consensus 453 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~ 532 (773)
+.++.||++||.+ ||+|||+
T Consensus 187 ----------------------------------------------------~~~~~~S~~G~~~--------di~APG~ 206 (279)
T 2pwa_A 187 ----------------------------------------------------DRRSSFSNYGSVL--------DIFGPGT 206 (279)
T ss_dssp ----------------------------------------------------SBBCTTCCBSTTC--------CEEEECS
T ss_pred ----------------------------------------------------CCcCCcCCCCCcc--------eEEEecC
Confidence 2678999999965 9999999
Q ss_pred ceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 533 NIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 533 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
+|+++++. +.|..++|||||||||||++|||+|+ |++++.|||++|++||++..
T Consensus 207 ~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 207 DILSTWIG-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD 260 (279)
T ss_dssp SEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC
T ss_pred CeEEeecC-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc
Confidence 99999876 57999999999999999999999999 99999999999999999864
No 25
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=6.1e-47 Score=406.44 Aligned_cols=252 Identities=25% Similarity=0.307 Sum_probs=202.7
Q ss_pred CCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCC
Q 004101 140 GGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPN 219 (773)
Q Consensus 140 ~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 219 (773)
+++|+.+..++||+|||||||||++||+|.+. .+.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~---------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE---------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC----------
Confidence 35999987779999999999999999999742 122222222221
Q ss_pred cccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC--CCHHHHHHHHHHhhhCCCc
Q 004101 220 IIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG--CYSSDILAAMDVAIRDGVD 297 (773)
Q Consensus 220 ~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~g~d 297 (773)
.....|.+||||||||||+|+.. +.+.||||+|+|+.+|++.+.+ ....++++||+||++++++
T Consensus 55 ----~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~ 120 (306)
T 4h6w_A 55 ----ANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGAN 120 (306)
T ss_dssp --------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCS
T ss_pred ----CCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccce
Confidence 02245678999999999998741 2347999999999999987643 6778899999999999999
Q ss_pred EEEeccCCCC-CCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEeCCCeEEee
Q 004101 298 VLSLSLGGFP-LPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRMADGGLLYG 376 (773)
Q Consensus 298 VIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g 376 (773)
|||+|||... .......+..++..+.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 121 vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------------- 183 (306)
T 4h6w_A 121 IINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------------- 183 (306)
T ss_dssp EEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------------
T ss_pred eeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------------
Confidence 9999999753 2334456677777899999999999999998888888888999999985411
Q ss_pred eeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCc
Q 004101 377 ESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLE 456 (773)
Q Consensus 377 ~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~ 456 (773)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCceEe
Q 004101 457 EDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIA 536 (773)
Q Consensus 457 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~s 536 (773)
+.+++||++|+. ..||||+|||++|++
T Consensus 184 ------------------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s 210 (306)
T 4h6w_A 184 ------------------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILG 210 (306)
T ss_dssp ------------------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEE
T ss_pred ------------------------------------------------CCccccccccCC-----cCcceeecCCcCccc
Confidence 156788999864 368999999999999
Q ss_pred ccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCCCCC
Q 004101 537 AWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSA----YPKWSPAAIKSAIMTTADGNDHFGK 604 (773)
Q Consensus 537 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~s~~~ik~~L~~TA~~~~~~g~ 604 (773)
+++. +.|..++|||||||||||++|||+++ +|.|+|+|||++|++||++++..+.
T Consensus 211 ~~~~-------------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~ 269 (306)
T 4h6w_A 211 AKPN-------------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDT 269 (306)
T ss_dssp ECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTC
T ss_pred ccCC-------------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCC
Confidence 9876 58999999999999999999999865 6999999999999999999876543
No 26
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.8e-45 Score=413.46 Aligned_cols=269 Identities=29% Similarity=0.372 Sum_probs=206.2
Q ss_pred CCCcc-cCCCCCccEEEEEccCCCC------CCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCccccc
Q 004101 140 GGAWY-ESQFGHGSIIGVLDTGIWP------ESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVA 212 (773)
Q Consensus 140 ~~~~~-~~~~G~gv~VaVIDTGid~------~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~ 212 (773)
+.+|. .+++|+||+|||||||||+ .||+|.+ ++...++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC----
Confidence 45887 7999999999999999999 7999962 34444455432
Q ss_pred CCCCCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCC---CHHHHHHHHH
Q 004101 213 STTMSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGC---YSSDILAAMD 289 (773)
Q Consensus 213 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~ 289 (773)
..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+. ..+++.++|+
T Consensus 60 ------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~ 116 (434)
T 1wmd_A 60 ------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFS 116 (434)
T ss_dssp ------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHH
T ss_pred ------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHH
Confidence 2367889999999999998631 1379999999999999987663 4567899999
Q ss_pred HhhhCCCcEEEeccCCCCCCCcccHHHHHHHHH-HhCCCEEEEeCCCCCCCC--CccccCCCceEEEcCcCCCccceeEE
Q 004101 290 VAIRDGVDVLSLSLGGFPLPLFDDSIAIGSFRA-MEHGISVVCAAGNNGPLQ--SSVANIAPWIATVGASTLDRRFPAIV 366 (773)
Q Consensus 290 ~A~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgA~~~~~~~~~~~ 366 (773)
+|+++|++|||||||......+ +....++.++ .++|++||+||||+|... ...+..++++|+|||++..+...
T Consensus 117 ~a~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~--- 192 (434)
T 1wmd_A 117 QAYSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF--- 192 (434)
T ss_dssp HHHHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG---
T ss_pred HHHhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc---
Confidence 9999999999999998752222 2333344344 589999999999999764 35677789999999975332100
Q ss_pred EeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEE
Q 004101 367 RMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAM 446 (773)
Q Consensus 367 ~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 446 (773)
. .
T Consensus 193 -------------------~--------------------------------------------------------~--- 194 (434)
T 1wmd_A 193 -------------------G--------------------------------------------------------S--- 194 (434)
T ss_dssp -------------------C--------------------------------------------------------G---
T ss_pred -------------------C--------------------------------------------------------c---
Confidence 0 0
Q ss_pred EEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCc
Q 004101 447 ILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPD 526 (773)
Q Consensus 447 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPD 526 (773)
.....+.+++||++||+. ++++|||
T Consensus 195 -----------------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpd 219 (434)
T 1wmd_A 195 -----------------------------------------------------YADNINHVAQFSSRGPTK--DGRIKPD 219 (434)
T ss_dssp -----------------------------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCC
T ss_pred -----------------------------------------------------ccCCCCccccccCCCCCC--CCCCCce
Confidence 001123789999999998 8999999
Q ss_pred eEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCC-----CHHHHHHHHHhccccCC
Q 004101 527 VIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKW-----SPAAIKSAIMTTADGND 600 (773)
Q Consensus 527 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----s~~~ik~~L~~TA~~~~ 600 (773)
|+|||++|+++++........ .....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 220 i~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~ 297 (434)
T 1wmd_A 220 VMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG 297 (434)
T ss_dssp EEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS
T ss_pred EEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC
Confidence 999999999998643210000 00013689999999999999999999999999876 89999999999999864
No 27
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.3e-45 Score=390.39 Aligned_cols=231 Identities=31% Similarity=0.427 Sum_probs=195.3
Q ss_pred CCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCCc
Q 004101 141 GAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPNI 220 (773)
Q Consensus 141 ~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~ 220 (773)
..|+.. +|+||+|||||||||++||+|.+ ++...++|..+
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~------------ 63 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEG---------------------------RAKQIKSYAST------------ 63 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEECSSS------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhcc---------------------------ccccccCCCCC------------
Confidence 356655 99999999999999999999973 23333444322
Q ss_pred ccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhCC----
Q 004101 221 IQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRDG---- 295 (773)
Q Consensus 221 ~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g---- 295 (773)
..|.+||||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|+++++
T Consensus 64 ------~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~ 123 (279)
T 3f7m_A 64 ------ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRN 123 (279)
T ss_dssp ------SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSC
T ss_pred ------CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhcccccc
Confidence 2378999999999999863 6999999999999998876 78899999999999876
Q ss_pred ---CcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCCc-cccCCCceEEEcCcCCCccceeEEEeCCC
Q 004101 296 ---VDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQSS-VANIAPWIATVGASTLDRRFPAIVRMADG 371 (773)
Q Consensus 296 ---~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~g 371 (773)
++|||||||.. ..+.+..++.++.++|++||+||||+|..... .+...+++|+|||++.+
T Consensus 124 ~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 187 (279)
T 3f7m_A 124 CPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------------ 187 (279)
T ss_dssp CTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------
T ss_pred CCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC------------
Confidence 89999999975 34566777778899999999999999976543 47778999999985311
Q ss_pred eEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEecc
Q 004101 372 GLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANT 451 (773)
Q Consensus 372 ~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 451 (773)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCC
Q 004101 452 EINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPG 531 (773)
Q Consensus 452 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG 531 (773)
+.+++||++||.. ||+|||
T Consensus 188 -----------------------------------------------------~~~~~~S~~g~~~--------di~ApG 206 (279)
T 3f7m_A 188 -----------------------------------------------------DVRSTFSNYGRVV--------DIFAPG 206 (279)
T ss_dssp -----------------------------------------------------SBBCTTCCBSTTC--------CEEEEC
T ss_pred -----------------------------------------------------CCCCCCCCCCCCC--------eEEECC
Confidence 2678899999965 999999
Q ss_pred CceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCC
Q 004101 532 VNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHF 602 (773)
Q Consensus 532 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~ 602 (773)
++|+++++. +.|..++|||||||+|||++|||+|++|+ ++++||++|++||++....
T Consensus 207 ~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~~ 263 (279)
T 3f7m_A 207 TSITSTWIG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVLT 263 (279)
T ss_dssp SSEEEECGG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCCB
T ss_pred CCeEeecCC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccccc
Confidence 999999876 57999999999999999999999999999 9999999999999876543
No 28
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-44 Score=435.06 Aligned_cols=357 Identities=20% Similarity=0.163 Sum_probs=237.4
Q ss_pred CCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC---CCHHHHHHHHHHhhh-----CCCcE
Q 004101 227 PRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG---CYSSDILAAMDVAIR-----DGVDV 298 (773)
Q Consensus 227 ~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~A~~-----~g~dV 298 (773)
..|++||||||||||||.. + ...+.||||+|+|+.+|+++..+ .+..+++.+|.+|++ .|++|
T Consensus 266 v~D~~GHGThVAGIIAa~~-N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 266 VGMSSPHGTHVSSIASGNH-S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp EECCCHHHHHHHHHHCCCC-S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCCcHHHHHHHHhcCC-C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceE
Confidence 3578999999999999985 2 12247999999999999998754 356778888888877 79999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHH-hCCCEEEEeCCCCCCCCCc--cccC--CCceEEEcCcCCCccceeEEEeCCCeE
Q 004101 299 LSLSLGGFPLPLFDDSIAIGSFRAM-EHGISVVCAAGNNGPLQSS--VANI--APWIATVGASTLDRRFPAIVRMADGGL 373 (773)
Q Consensus 299 In~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~~--~p~vitVgA~~~~~~~~~~~~~~~g~~ 373 (773)
||||||........+.+..++.++. ++|++||+||||+|....+ .++. ++++|+|||++.+.......
T Consensus 337 INmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~y------- 409 (1354)
T 3lxu_X 337 INMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY------- 409 (1354)
T ss_dssp EEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------
T ss_pred EEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccc-------
Confidence 9999999864334456666666775 8999999999999986443 4553 79999999976432110000
Q ss_pred EeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCC
Q 004101 374 LYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEI 453 (773)
Q Consensus 374 ~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~ 453 (773)
..
T Consensus 410 -------------------s~----------------------------------------------------------- 411 (1354)
T 3lxu_X 410 -------------------AM----------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------cc-----------------------------------------------------------
Confidence 00
Q ss_pred CCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCc
Q 004101 454 NLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVN 533 (773)
Q Consensus 454 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~ 533 (773)
.....+.+++|||+||+. ++++||||+|||++
T Consensus 412 ----------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~ 443 (1354)
T 3lxu_X 412 ----------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGA 443 (1354)
T ss_dssp ----------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--
T ss_pred ----------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCce
Confidence 000113789999999998 88999999999999
Q ss_pred eEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHH----hCCCCCHHHHHHHHHhccccCCCCCCcccCC
Q 004101 534 IIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRS----AYPKWSPAAIKSAIMTTADGNDHFGKPIMDG 609 (773)
Q Consensus 534 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P~~s~~~ik~~L~~TA~~~~~~g~~~~~~ 609 (773)
|+++..... +.|..++|||||||||||++|||++ .+|+|++.+||++|++||++++.......-.
T Consensus 444 I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~~~~~~G~ 512 (1354)
T 3lxu_X 444 IASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYVDPFAQGH 512 (1354)
T ss_dssp ------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTSCTTTSSS
T ss_pred EEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCCCcccccC
Confidence 999865422 5789999999999999999999987 7999999999999999999987532211111
Q ss_pred CCCcccccCCCCccccCCccccccccccCCCCccceeEeecccccccccccCCcccccCCCceeEEeecCcceEEEEEEE
Q 004101 610 NKPPAVKAINPGLIYDITPDEYVTHLCTLGYTESEIFTITHRNVSCHENLRMNRGFSLNYPSISVVFKHGKKSTMIRRRL 689 (773)
Q Consensus 610 ~~~a~~~a~~~Glv~~~~~~dy~~~~~~~g~~~~~i~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~rtv 689 (773)
+.....+|+...+.++..+.+|+.|.|..++.... .+..+.. .+ ....+++++|
T Consensus 513 GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r-gIylR~~-~~------------------------~~~~~~tv~V 566 (1354)
T 3lxu_X 513 GLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK-GIHLRQG-VQ------------------------RNSIDYNVYI 566 (1354)
T ss_dssp SBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS-SEEECSS-CC------------------------CSCEEEEEEE
T ss_pred CEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC-ceEEecc-cc------------------------CCceEEEEEE
Confidence 13344677777778888888999999988642111 1111110 00 0122233333
Q ss_pred EecC-------CCC-ee--EEEEEEC-CCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEEEEEEEcCC
Q 004101 690 TNVG-------SPN-SI--YSVKVTA-PEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQLAWVHSGN 758 (773)
Q Consensus 690 tn~g-------~~~-~~--y~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~l~~~~~~~ 758 (773)
+.+= ... .. -++.+.. .+.++ -|+.|.+ .++.++|.|++.+... .. +.+++.|...+..+
T Consensus 567 ~p~f~~~~~~~~~~~i~f~~~l~L~~t~~wv~---~p~~l~l--~~~~r~~~v~vDp~~L-~~---G~h~~~v~~~D~~~ 637 (1354)
T 3lxu_X 567 EPIFYNDKEADPKDKFNFNVRLNLIASQPWVQ---CGAFLDL--SYGTRSIAVRVDPTGL-QP---GVHSAVIRAYDTDC 637 (1354)
T ss_dssp EEEESSCSCSSSTTCSCCCCEEEEEESSTTEE---ECSCEEC--TTSCEEEEEEECGGGC-CS---EEEEEEEEEEESSC
T ss_pred eeeecCcccCChhhccceEEEEEEecCCCcee---cccceee--cCCCceEEEEECCCCC-CC---cceeEEEEEEEcCC
Confidence 2111 111 11 2233222 23333 2777777 4788999999999877 45 78999999775444
Q ss_pred -CCccEEEeeEEEE
Q 004101 759 -SSLYRVRSPISVT 771 (773)
Q Consensus 759 -~~~~~v~~P~~~~ 771 (773)
..+...|+||.|.
T Consensus 638 ~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 638 VQKGSLFEIPVTVV 651 (1354)
T ss_dssp TTSCCSEEEEEEEE
T ss_pred cccCceEEeeEEEE
Confidence 3347899999875
No 29
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6e-45 Score=396.72 Aligned_cols=279 Identities=25% Similarity=0.306 Sum_probs=205.1
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCce---eeeeecCCcccccCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKL---IGARFFTKGHRVASTT 215 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~ki---ig~~~~~~~~~~~~~~ 215 (773)
+..+|+.+++|+||+||||||||+ +||+|.++-. ..|+-......... .+.+. ....++.+.+..
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~---- 88 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLD---GDGRDADPFDEGDWFDNWAC---- 88 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCS---SSSSBSCCBCCCCCBCTTTT----
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCcccccc---CCCccCCccccccccccccc----
Confidence 567999999999999999999998 9999984311 11110000000000 00000 000000000000
Q ss_pred CCCCcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHHHHHHHhhh--
Q 004101 216 MSPNIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIR-- 293 (773)
Q Consensus 216 ~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-- 293 (773)
...+.+.....|..||||||||||+|...+.. .+.||||+|+|+.+|+++..++..++++++|+||++
T Consensus 89 --~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~ 158 (340)
T 3lpc_A 89 --GGRPDPRKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGR 158 (340)
T ss_dssp --SCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCC
T ss_pred --cCCCCcccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccc
Confidence 01122334567899999999999999753322 237999999999999999888889999999999998
Q ss_pred --------CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCceEEEcCcCCCcccee
Q 004101 294 --------DGVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPWIATVGASTLDRRFPA 364 (773)
Q Consensus 294 --------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~ 364 (773)
.+++|||||||.... ....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 159 ~~~~~~~~~~~~Vin~S~G~~~~--~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----- 231 (340)
T 3lpc_A 159 IAGIPENRNPAKVINMSLGSDGQ--CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR----- 231 (340)
T ss_dssp CTTSCCCSSCCSEEEECCCEESC--CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT-----
T ss_pred ccccccccCCCeEEEeCcCCCCC--cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC-----
Confidence 899999999997632 2345566667888999999999999997654 467778999999985411
Q ss_pred EEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCce
Q 004101 365 IVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGA 444 (773)
Q Consensus 365 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 444 (773)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCccc
Q 004101 445 AMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILK 524 (773)
Q Consensus 445 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~K 524 (773)
+.++.||++|| |
T Consensus 232 ------------------------------------------------------------~~~~~~S~~g~--------~ 243 (340)
T 3lpc_A 232 ------------------------------------------------------------GIRASFSNYGV--------D 243 (340)
T ss_dssp ------------------------------------------------------------SSBCTTCCBST--------T
T ss_pred ------------------------------------------------------------CCcCCCCCCCC--------C
Confidence 26788999997 5
Q ss_pred CceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHh-C---CCCCHHHHHHHHHhccccCC
Q 004101 525 PDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSA-Y---PKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 525 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~s~~~ik~~L~~TA~~~~ 600 (773)
|||+|||++|+++++.... ......|..++|||||||||||++|||+|+ + |.+++++||++|++||+++.
T Consensus 244 ~di~ApG~~i~s~~~~~~~------~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~ 317 (340)
T 3lpc_A 244 VDLAAPGQDILSTVDSGTR------RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN 317 (340)
T ss_dssp CCEEEECSSEEEEEESCSS------SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS
T ss_pred ceEEecCCCeecccCCCCc------CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC
Confidence 6999999999999876421 111256999999999999999999999998 5 99999999999999999875
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.6e-45 Score=413.13 Aligned_cols=246 Identities=24% Similarity=0.265 Sum_probs=188.9
Q ss_pred CcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCCCcc
Q 004101 142 AWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSPNII 221 (773)
Q Consensus 142 ~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 221 (773)
.|..+.+|+||+|+|||||||++||+|.++- ....+++.... ++ .
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~~---dg------~ 62 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPEE---DG------T 62 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCCC---C--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccCC---CC------c
Confidence 7888999999999999999999999997420 11111111100 00 0
Q ss_pred cccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHHHHhhhC------
Q 004101 222 QEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAMDVAIRD------ 294 (773)
Q Consensus 222 ~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~------ 294 (773)
.....+.|..||||||||||+|+. .||||+|+|+.+|++++.| ++.+++++||+|+++.
T Consensus 63 ~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~ 128 (546)
T 2qtw_B 63 RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPV 128 (546)
T ss_dssp -----CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCC
T ss_pred cccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccC
Confidence 000235688999999999999874 6999999999999999877 7888999999999974
Q ss_pred CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEeCCCCCCCCC-ccccCCCceEEEcCcCCCccceeEEEeCCCeE
Q 004101 295 GVDVLSLSLGGFPLPLFDDSIAIGSFRAMEHGISVVCAAGNNGPLQS-SVANIAPWIATVGASTLDRRFPAIVRMADGGL 373 (773)
Q Consensus 295 g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~ 373 (773)
+++|||||||+.. ...+..++.++.++|++||+||||+|.+.. .+|...+++|+|||++.+...
T Consensus 129 g~~VINmSlGg~~----s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~----------- 193 (546)
T 2qtw_B 129 GPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP----------- 193 (546)
T ss_dssp SCEEEEECEEEEC----CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-----------
T ss_pred CCeEEEecCCCCC----cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-----------
Confidence 8999999999753 356666777889999999999999997653 457778999999986532210
Q ss_pred EeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCC
Q 004101 374 LYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEI 453 (773)
Q Consensus 374 ~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~ 453 (773)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCceEeCCCc
Q 004101 454 NLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDVIAPGVN 533 (773)
Q Consensus 454 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~ 533 (773)
...-..||++|| ||||+|||++
T Consensus 194 --------------------------------------------------a~~s~~fSn~G~--------~vDI~APG~~ 215 (546)
T 2qtw_B 194 --------------------------------------------------VTLGTLGTNFGR--------CVDLFAPGED 215 (546)
T ss_dssp --------------------------------------------------CEETTEECCBST--------TCCEEEECSS
T ss_pred --------------------------------------------------ccccCCcCCCCC--------cceEEecCcc
Confidence 000123899998 4599999999
Q ss_pred eEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 004101 534 IIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGND 600 (773)
Q Consensus 534 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 600 (773)
|+++++... ..|..++|||||||||||++|||+|++|+|+++|||++|++||.+..
T Consensus 216 I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~ 271 (546)
T 2qtw_B 216 IIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 271 (546)
T ss_dssp EEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESC
T ss_pred EEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 999987632 57999999999999999999999999999999999999999998654
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=8.1e-44 Score=403.39 Aligned_cols=288 Identities=17% Similarity=0.124 Sum_probs=207.0
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
...+|..+++|+||+|||||||||++||+|.++-. ....++|.++.
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~--------- 72 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQD--------- 72 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTTB---------
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCCC---------
Confidence 56799999999999999999999999999984200 00123343321
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHHHHHHHhhh-CCCc
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIR-DGVD 297 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~g~d 297 (773)
.++.+...+.|.+||||||||||||...++. .+.||||+|+|+.+|+++ +..+++++|++++++ ++++
T Consensus 73 ~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~ 141 (471)
T 1p8j_A 73 PDPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIH 141 (471)
T ss_dssp SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCC
T ss_pred CCCCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCe
Confidence 1111112457889999999999999753221 237999999999999986 345689999999999 8999
Q ss_pred EEEeccCCCCCC----CcccHHHHHHHHHH-----hCCCEEEEeCCCCCCCCCc----cccCCCceEEEcCcCCCcccee
Q 004101 298 VLSLSLGGFPLP----LFDDSIAIGSFRAM-----EHGISVVCAAGNNGPLQSS----VANIAPWIATVGASTLDRRFPA 364 (773)
Q Consensus 298 VIn~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgA~~~~~~~~~ 364 (773)
|||||||..... .....+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 142 Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~----- 216 (471)
T 1p8j_A 142 IYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF----- 216 (471)
T ss_dssp EEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-----
T ss_pred EEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-----
Confidence 999999986311 11223333444443 4799999999999975321 12345789999985421
Q ss_pred EEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCce
Q 004101 365 IVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGA 444 (773)
Q Consensus 365 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~ 444 (773)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCccc
Q 004101 445 AMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILK 524 (773)
Q Consensus 445 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~K 524 (773)
+.++.||++||.. ....+
T Consensus 217 ------------------------------------------------------------g~~a~~S~~g~~~--~~~~~ 234 (471)
T 1p8j_A 217 ------------------------------------------------------------GNVPWYSEACSST--LATTY 234 (471)
T ss_dssp ------------------------------------------------------------SCCCTTCCBCTTC--CEEEE
T ss_pred ------------------------------------------------------------CCcccccCCCCcc--eEEeC
Confidence 2678899999987 44456
Q ss_pred CceEeCCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCC
Q 004101 525 PDVIAPGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFGK 604 (773)
Q Consensus 525 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g~ 604 (773)
|+..+||.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++++....
T Consensus 235 ~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~ 302 (471)
T 1p8j_A 235 SSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNAD 302 (471)
T ss_dssp CCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCS
T ss_pred CCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCC
Confidence 66666778999987642 579999999999999999999999999999999999999999999875432
Q ss_pred cccCCC-CCcccccCCCCccccCCccc
Q 004101 605 PIMDGN-KPPAVKAINPGLIYDITPDE 630 (773)
Q Consensus 605 ~~~~~~-~~a~~~a~~~Glv~~~~~~d 630 (773)
...... ........+.|+|....+.+
T Consensus 303 ~~~~n~~g~~~~~~~G~G~vda~~Av~ 329 (471)
T 1p8j_A 303 DWATNGVGRKVSHSYGYGLLDAGAMVA 329 (471)
T ss_dssp CCEECTTSCEEBTTTBTCBCCHHHHHH
T ss_pred CceecCCCcccCCCCCCEEEcHhHHHH
Confidence 111000 00113456778775544433
No 32
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.6e-42 Score=404.18 Aligned_cols=266 Identities=25% Similarity=0.259 Sum_probs=185.2
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
...+|..+++|+||+|||||||||++||+|.++- +.+.++|..+..
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~~-------- 104 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD-------- 104 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCSS--------
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCCC--------
Confidence 4568999999999999999999999999997421 112233433221
Q ss_pred CcccccCCCCC-CCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCC--HHHHHHHHHHhhhCC
Q 004101 219 NIIQEYVSPRD-STGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCY--SSDILAAMDVAIRDG 295 (773)
Q Consensus 219 ~~~~~~~~~~d-~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~--~~~i~~ai~~A~~~g 295 (773)
...+.| .+||||||||||||. .++. .+.||||+|+|+.+|+++..+.. ...+++....+..++
T Consensus 105 -----d~~p~d~~~gHGT~vAGiiaa~-~n~~--------g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~ 170 (600)
T 2oxa_A 105 -----DPTPTDPDTGHGTSVSGIIAAV-DNAI--------GTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRD 170 (600)
T ss_dssp -----CCCCCSTTCCHHHHHHHHHHCC-SSSS--------SCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHT
T ss_pred -----CCCCCCCCCCCccHHHHHhhcc-cCCC--------cceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccC
Confidence 022344 789999999999998 2221 23799999999999999987633 234445444577889
Q ss_pred CcEEEeccCCCCC-CC----cccHHHHHHHH---HHhCCCEEEEeCCCCCCCCCc----------------------ccc
Q 004101 296 VDVLSLSLGGFPL-PL----FDDSIAIGSFR---AMEHGISVVCAAGNNGPLQSS----------------------VAN 345 (773)
Q Consensus 296 ~dVIn~SlG~~~~-~~----~~~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~~----------------------~~~ 345 (773)
++|||||||.... .. +...+..++.. +.++|++||+||||+|..... .++
T Consensus 171 ~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~ 250 (600)
T 2oxa_A 171 NRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSN 250 (600)
T ss_dssp CSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGG
T ss_pred CeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcc
Confidence 9999999998742 11 11223222222 447899999999999864211 111
Q ss_pred CCCceEEEcCcCCCccceeEEEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEe
Q 004101 346 IAPWIATVGASTLDRRFPAIVRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCD 425 (773)
Q Consensus 346 ~~p~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~ 425 (773)
.++|+|+|||++
T Consensus 251 ~s~~vItVgA~~-------------------------------------------------------------------- 262 (600)
T 2oxa_A 251 SNFWNLVVSALN-------------------------------------------------------------------- 262 (600)
T ss_dssp GSSSEEEEEEEC--------------------------------------------------------------------
T ss_pred cCceeEEEeccc--------------------------------------------------------------------
Confidence 233344444421
Q ss_pred cCCCchhhHHHHHHHcCceEEEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCC
Q 004101 426 RGVNGRAEKGQVVKEAGGAAMILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAP 505 (773)
Q Consensus 426 ~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 505 (773)
..+
T Consensus 263 -----------------------------------------------------------------------------~~g 265 (600)
T 2oxa_A 263 -----------------------------------------------------------------------------ADG 265 (600)
T ss_dssp -----------------------------------------------------------------------------TTS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 123
Q ss_pred ccccccCCCCCCCCCCcccCceEeCCCceEeccCCCCC--C-------------------CCCCCCCcccceEEeccccc
Q 004101 506 AVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQNLG--P-------------------SSLPEDNRRVNFTVMSGTSM 564 (773)
Q Consensus 506 ~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~~~~--~-------------------~~~~~~~~~~~y~~~sGTSm 564 (773)
.++.||++||+. ||+|||++|.+..+.... . .....+...+.|..++||||
T Consensus 266 ~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~ 337 (600)
T 2oxa_A 266 VRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSS 337 (600)
T ss_dssp SBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHH
T ss_pred CcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchH
Confidence 788999999987 999999997554432000 0 00001112245899999999
Q ss_pred hhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCc
Q 004101 565 ACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDHFGKP 605 (773)
Q Consensus 565 AaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~g~~ 605 (773)
|||||||++|||+|++|+|++++||++|++||++++..+.+
T Consensus 338 AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~ 378 (600)
T 2oxa_A 338 ATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQP 378 (600)
T ss_dssp HHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCC
T ss_pred HhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCccccc
Confidence 99999999999999999999999999999999998866543
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.9e-43 Score=397.48 Aligned_cols=252 Identities=19% Similarity=0.180 Sum_probs=195.0
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
...+|..+++|+||+|||||||||++||+|.++- + ..+.++|.++..
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~~-------- 89 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNTN-------- 89 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTBS--------
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCCC--------
Confidence 4568999999999999999999999999998431 0 012234443221
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCCCCHHHHHHHHHHhhhCCCcE
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIRDGVDV 298 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~g~dV 298 (773)
...+..|.+||||||||||||...++ ..+.||||+|+|+.+|+++.. ++..++++||+||++++ +|
T Consensus 90 ----~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~I 155 (503)
T 2id4_A 90 ----LPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DI 155 (503)
T ss_dssp ----CCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SE
T ss_pred ----CCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CE
Confidence 00223578899999999999975322 113799999999999999743 67888999999999998 99
Q ss_pred EEeccCCCCC----CCcccHHHHHHHHHH-----hCCCEEEEeCCCCCCCCC--cccc--CCCceEEEcCcCCCccceeE
Q 004101 299 LSLSLGGFPL----PLFDDSIAIGSFRAM-----EHGISVVCAAGNNGPLQS--SVAN--IAPWIATVGASTLDRRFPAI 365 (773)
Q Consensus 299 In~SlG~~~~----~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~~--~~p~vitVgA~~~~~~~~~~ 365 (773)
||||||.... ......+..++.++. .+|++||+||||+|.... .++. .++++|+|||++.+
T Consensus 156 in~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------ 229 (503)
T 2id4_A 156 YSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------ 229 (503)
T ss_dssp EEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT------
T ss_pred EEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC------
Confidence 9999998631 112234455555555 489999999999996532 2222 46789999975411
Q ss_pred EEeCCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCchhhHHHHHHHcCceE
Q 004101 366 VRMADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAA 445 (773)
Q Consensus 366 ~~~~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g 445 (773)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccC
Q 004101 446 MILANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKP 525 (773)
Q Consensus 446 ~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KP 525 (773)
+.+++||++||..
T Consensus 230 -----------------------------------------------------------~~~a~~S~~g~~~-------- 242 (503)
T 2id4_A 230 -----------------------------------------------------------DLHPPYSEGCSAV-------- 242 (503)
T ss_dssp -----------------------------------------------------------SCCCTTCCCCTTE--------
T ss_pred -----------------------------------------------------------CCcCCcCCCCCcc--------
Confidence 2678899999987
Q ss_pred ceEe----CCCceEeccCCCCCCCCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccccCCC
Q 004101 526 DVIA----PGVNIIAAWPQNLGPSSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTADGNDH 601 (773)
Q Consensus 526 DI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~ 601 (773)
|++| ||..|+++.... ..|..++|||||||||||++|||+|++|+|++.+||++|++||++++.
T Consensus 243 ~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~ 310 (503)
T 2id4_A 243 MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEK 310 (503)
T ss_dssp EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTT
T ss_pred eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCC
Confidence 8887 899999995432 589999999999999999999999999999999999999999998875
Q ss_pred C
Q 004101 602 F 602 (773)
Q Consensus 602 ~ 602 (773)
.
T Consensus 311 ~ 311 (503)
T 2id4_A 311 N 311 (503)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=6.4e-40 Score=383.66 Aligned_cols=289 Identities=23% Similarity=0.214 Sum_probs=183.8
Q ss_pred CCCCcccCCCCCccEEEEEccCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCceeeeeecCCcccccCCCCCC
Q 004101 139 NGGAWYESQFGHGSIIGVLDTGIWPESPSFDDHGMPPVPKKWRGVCQEGQSFNSSNCNRKLIGARFFTKGHRVASTTMSP 218 (773)
Q Consensus 139 ~~~~~~~~~~G~gv~VaVIDTGid~~Hp~f~d~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 218 (773)
...+|..+++|+||+|||||||||++||||.++ ...+.++|.++..
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n--------------------------~~~~~~~~~~~~~-------- 104 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN--------------------------VRPGSKNVVTGSD-------- 104 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG--------------------------BCSCCBCTTTSSS--------
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc--------------------------cccCcceeecCCC--------
Confidence 445899999999999999999999999999742 0112233333221
Q ss_pred CcccccCCCCCCCCCccchhhhhccccccccccccCCCccccccccCCeEeEEeeecCCC-CCHHHHHHHH-HHhhhCCC
Q 004101 219 NIIQEYVSPRDSTGHGTHTSSTAAGTSVSMASVLGNAGGVARGMAPGAHIAVYKVCWFNG-CYSSDILAAM-DVAIRDGV 296 (773)
Q Consensus 219 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~A~~~g~ 296 (773)
+..+..|.+||||||||||||.. + ..| +.||||+|+|+.+|++++.+ +..++++.|+ +++..+++
T Consensus 105 ----dp~p~~~~~gHGThVAGiIAa~~-n-------~~g-~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~ 171 (600)
T 3hjr_A 105 ----DPTPTDPDTAHGTSVSGIIAAVD-N-------AIG-TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDN 171 (600)
T ss_dssp ----CCCCCSTTCCHHHHHHHHHHCCS-S-------SSS-CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTC
T ss_pred ----CCCCCCCCCChHHHHHHHHhEeC-C-------CCC-cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCC
Confidence 11224467899999999999863 1 112 37999999999999998876 6777877666 66788899
Q ss_pred cEEEeccCCCC-CCCc-----ccHHHHHHHHH--HhCCCEEEEeCCCCCCCCCccccCCCceEEEcCcCCCccceeEEEe
Q 004101 297 DVLSLSLGGFP-LPLF-----DDSIAIGSFRA--MEHGISVVCAAGNNGPLQSSVANIAPWIATVGASTLDRRFPAIVRM 368 (773)
Q Consensus 297 dVIn~SlG~~~-~~~~-----~~~~~~a~~~a--~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~ 368 (773)
+|||+|||... .... ...+..+...+ ..+|+++|+||||.+....... +.+.+ .
T Consensus 172 ~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~------------~ 233 (600)
T 3hjr_A 172 RVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNR------------T 233 (600)
T ss_dssp SEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEE------------E
T ss_pred CEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------ccccc------------C
Confidence 99999999753 1111 11222222222 2689999999999764321100 00000 0
Q ss_pred CCCeEEeeeeccCCCCCCCCCceeEEEEecCCCCCCCcccCCCCCC-CcccceEEEEecCCCchhhHHHHHHHcCceEEE
Q 004101 369 ADGGLLYGESMYPGNQFSKTEKELDLIYVTGGDGGSEFCLKGSLPI-AEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMI 447 (773)
Q Consensus 369 ~~g~~~~g~~~~~~~~~~~~~~~~~lv~~~~~~~~~~~c~~~~~~~-~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i 447 (773)
+++.. + ....|. +++ ......|.+
T Consensus 234 g~~~~------------------~----------~~~~~~---~d~~~~~~~~IsV------------------------ 258 (600)
T 3hjr_A 234 GNGPK------------------L----------PFENSN---LDPSNSNFWNLVV------------------------ 258 (600)
T ss_dssp SSCCC------------------C----------CSSBTT---SSGGGGSSSEEEE------------------------
T ss_pred CCCCC------------------C----------Cccccc---ccCccccCcceEE------------------------
Confidence 00000 0 000000 000 000000000
Q ss_pred EeccCCCCcccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecceeecccCCCccccccCCCCCCCCCCcccCce
Q 004101 448 LANTEINLEEDSVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGGTVIGRSRAPAVAQFSARGPSLYTPTILKPDV 527 (773)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~GP~~~~~~~~KPDI 527 (773)
......+.++.||++|+.. ++
T Consensus 259 ---------------------------------------------------gA~~~~g~~a~yS~~G~~v--------~~ 279 (600)
T 3hjr_A 259 ---------------------------------------------------SALNADGVRSSYSSVGSNI--------FL 279 (600)
T ss_dssp ---------------------------------------------------EEECTTSSBCTTCCBCTTC--------CE
T ss_pred ---------------------------------------------------eeecCCCCEeecccCCcce--------ee
Confidence 0012234788999999987 89
Q ss_pred EeCCCceE--------eccCCCCCC-------------CCCCCCCcccceEEeccccchhhhhHHHHHHHHHhCCCCCHH
Q 004101 528 IAPGVNII--------AAWPQNLGP-------------SSLPEDNRRVNFTVMSGTSMACPHVSGITALIRSAYPKWSPA 586 (773)
Q Consensus 528 ~APG~~I~--------sa~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~ 586 (773)
+|||+++. ...++.... ...........|..++|||||||||||++|||+|+||+|+++
T Consensus 280 ~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~ 359 (600)
T 3hjr_A 280 SATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVR 359 (600)
T ss_dssp EEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHH
T ss_pred ccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHH
Confidence 99997632 222211000 000112233678999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCcc
Q 004101 587 AIKSAIMTTADGNDHFGKPI 606 (773)
Q Consensus 587 ~ik~~L~~TA~~~~~~g~~~ 606 (773)
|||++|++||++++..+.|+
T Consensus 360 ~v~~~L~~TA~~~d~~~~p~ 379 (600)
T 3hjr_A 360 DLRDLLARSATRVDAKHQPV 379 (600)
T ss_dssp HHHHHHHHHCBCCSTTCCCE
T ss_pred HHHHHHHhhCccCCCCCCcc
Confidence 99999999999999887764
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.89 E-value=5e-24 Score=243.43 Aligned_cols=96 Identities=27% Similarity=0.421 Sum_probs=77.9
Q ss_pred ccccccCCeEeEEeeecCCCCCHHHHHHHHHHhhh---CCCcEEEeccCCCCCCC---cccHHHHHHHHHHhCCCEEEEe
Q 004101 259 ARGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIR---DGVDVLSLSLGGFPLPL---FDDSIAIGSFRAMEHGISVVCA 332 (773)
Q Consensus 259 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~---~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 332 (773)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||...... +.+.+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999973 246789999999998 78999999999874221 2345666677888999999999
Q ss_pred CCCCCCCC--------CccccCCCceEEEcCcCC
Q 004101 333 AGNNGPLQ--------SSVANIAPWIATVGASTL 358 (773)
Q Consensus 333 AGN~G~~~--------~~~~~~~p~vitVgA~~~ 358 (773)
|||+|... ..++..+|+|++|||++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999643 356678999999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.83 E-value=4.6e-21 Score=208.76 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=81.4
Q ss_pred cccccCCeEeEEeeecCCCCCHHHHHHHHHHhhh-CCCcEEEeccCCCCC----CCcccHHHHHHHHHHhCCCEEEEeCC
Q 004101 260 RGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAIR-DGVDVLSLSLGGFPL----PLFDDSIAIGSFRAMEHGISVVCAAG 334 (773)
Q Consensus 260 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~g~dVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 334 (773)
..+||+++++.|++.+..++..++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|+|
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4589999999999987655778899999999998 899999999998631 12345667777788899999999999
Q ss_pred CCCCCC-------------CccccCCCceEEEcCcCCC
Q 004101 335 NNGPLQ-------------SSVANIAPWIATVGASTLD 359 (773)
Q Consensus 335 N~G~~~-------------~~~~~~~p~vitVgA~~~~ 359 (773)
|+|... ..++..+|++++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999753 2456778999999997643
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.98 E-value=5.2e-10 Score=100.31 Aligned_cols=77 Identities=23% Similarity=0.251 Sum_probs=66.8
Q ss_pred CCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCcc
Q 004101 42 LQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDRR 121 (773)
Q Consensus 42 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~ 121 (773)
+++|||+|++...... ...|.+|+.+++.+. ....++.+.|++.|+||+++++++++++|+++|+|.+||||+.
T Consensus 37 p~~YIV~lk~~~~~~~-~~~h~~~l~s~~~~~-----~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~ 110 (114)
T 2w2n_P 37 PGTYVVVLKEETHLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 110 (114)
T ss_dssp EEEEEEEECTTCCHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEECCCCCHHH-HHHHHHHHHHHhhhc-----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCce
Confidence 5899999999876554 567889999988763 3467899999999999999999999999999999999999998
Q ss_pred ccc
Q 004101 122 LQV 124 (773)
Q Consensus 122 ~~~ 124 (773)
++.
T Consensus 111 v~~ 113 (114)
T 2w2n_P 111 VFA 113 (114)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.98 E-value=1.1e-09 Score=124.30 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=63.3
Q ss_pred cccccCCeEeEEeeecCCCCCHHHHHHHHHHhh--hCCCcEEEeccCCCCCC---CcccHHHHHHHHHHhCCCEEEEeCC
Q 004101 260 RGMAPGAHIAVYKVCWFNGCYSSDILAAMDVAI--RDGVDVLSLSLGGFPLP---LFDDSIAIGSFRAMEHGISVVCAAG 334 (773)
Q Consensus 260 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~--~~g~dVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAG 334 (773)
.+++++..++.|-..+. ....+.++..+++.. .+-++|||+|||..... .+.+.+......+..+||.|++|+|
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 34555555555543211 111223444444433 34689999999987422 2334455566678899999999999
Q ss_pred CCCCCC----------CccccCCCceEEEcCcCC
Q 004101 335 NNGPLQ----------SSVANIAPWIATVGASTL 358 (773)
Q Consensus 335 N~G~~~----------~~~~~~~p~vitVgA~~~ 358 (773)
|+|... ..+++.+|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999743 246778999999999764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.91 E-value=3.2e-09 Score=89.05 Aligned_cols=73 Identities=16% Similarity=0.268 Sum_probs=58.0
Q ss_pred CCCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCc
Q 004101 41 TLQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDR 120 (773)
Q Consensus 41 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~ 120 (773)
.+++|||+||++...+. ....+++.. +.++.+.|++ |+||+++++++++++|+++|+|.+||||+
T Consensus 7 i~~~YIV~~k~~~~~~~-------~~~~~~~~~-------g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~ 71 (80)
T 3cnq_P 7 GEKKYIVGFKQGFKSCA-------KKEDVISEK-------GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDK 71 (80)
T ss_dssp -CCEEEEEECTTCCSHH-------HHHHHHHTT-------TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECC
T ss_pred CCCCEEEEECCCCChHH-------HHHHHHHHc-------CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCc
Confidence 46899999998765322 112233322 5689999998 99999999999999999999999999999
Q ss_pred cccccccc
Q 004101 121 RLQVQTTY 128 (773)
Q Consensus 121 ~~~~~~~~ 128 (773)
.++++++.
T Consensus 72 ~v~~~tt~ 79 (80)
T 3cnq_P 72 LYRALSAT 79 (80)
T ss_dssp EEEECCC-
T ss_pred EEEEeeec
Confidence 99987654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.77 E-value=8.4e-09 Score=93.53 Aligned_cols=77 Identities=23% Similarity=0.251 Sum_probs=62.3
Q ss_pred CCeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCcc
Q 004101 42 LQTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDRR 121 (773)
Q Consensus 42 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~ 121 (773)
+++|||+||+...... ...+.+++.+.+++. ..+.++.+.|++.|+||+++++++++++|+++|+|.+|++++.
T Consensus 47 p~~YIV~~K~~~~~~~-~~~~~~~l~~~~~~r-----~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~ 120 (124)
T 2qtw_A 47 PGTYVVVLKEETHLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 120 (124)
T ss_dssp EEEEEEEECTTCCHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred CCCEEEEECCCCCHHH-HHHHHHHHHHHHhhc-----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCce
Confidence 4899999999876544 445555666554443 2356899999999999999999999999999999999999998
Q ss_pred ccc
Q 004101 122 LQV 124 (773)
Q Consensus 122 ~~~ 124 (773)
++.
T Consensus 121 v~a 123 (124)
T 2qtw_A 121 VFA 123 (124)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.62 E-value=5e-08 Score=80.66 Aligned_cols=70 Identities=19% Similarity=0.251 Sum_probs=55.4
Q ss_pred CeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEec-ceeeEEEEEcCHHHHHHHhCC--CCeEEEEeC
Q 004101 43 QTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYH-FAMEGFAAQLTRSELESLQKL--PDVIAIRPD 119 (773)
Q Consensus 43 ~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~-~~~ngfs~~l~~~~~~~L~~~--p~V~~V~~~ 119 (773)
+.|||.||++..... ...+.+++.. . +.++.+.|+ ..|+||+++++++.+++|+++ |.|.+||+|
T Consensus 3 ~sYIV~lk~~~~~~~-~~~~~~~~~~----~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDK-IRETKDEVIA----E-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp EEEEEEECTTCCHHH-HHHHHHHHHH----H-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred ceEEEEECCCCCHHH-HHHHHHHHHh----h-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 689999998765444 3344444433 2 346889994 799999999999999999999 899999999
Q ss_pred ccccc
Q 004101 120 RRLQV 124 (773)
Q Consensus 120 ~~~~~ 124 (773)
+.+++
T Consensus 71 ~~v~~ 75 (76)
T 1v5i_B 71 HVAHA 75 (76)
T ss_dssp CEEEC
T ss_pred cEEeC
Confidence 98754
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.59 E-value=2.6e-07 Score=89.86 Aligned_cols=94 Identities=15% Similarity=0.092 Sum_probs=75.1
Q ss_pred CCCcccCCCCCCCc-------ccceEEEEecCC-CchhhHHHHHHHcCceEEEEeccCCCCccc----ccccccccEEEE
Q 004101 403 GSEFCLKGSLPIAE-------VRGKMVVCDRGV-NGRAEKGQVVKEAGGAAMILANTEINLEED----SVDVHVLPATLV 470 (773)
Q Consensus 403 ~~~~c~~~~~~~~~-------~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~----~~~~~~~p~~~i 470 (773)
....|.+..+.... .+++|+|++||. |.|.+|..+++++||.++|+||+...+... ......+|+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 44789887653222 478999999999 999999999999999999999985322211 122356999999
Q ss_pred ehhhHHHHHHHHhcCCCcEEEEEecc
Q 004101 471 GFAESVRLKVYINSTRRARARIIFGG 496 (773)
Q Consensus 471 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 496 (773)
+..+|+.|++++..+...+++|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888887754
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.59 E-value=0.00012 Score=58.23 Aligned_cols=62 Identities=11% Similarity=0.246 Sum_probs=50.1
Q ss_pred CeEEEEeCCCCCCCccccchHHHHHHHhhhcccCCCCCCcceEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeCccc
Q 004101 43 QTYVVQLHPHGVISSLFTSKLHWHLSFIEQTLSSEEDPASRLLYSYHFAMEGFAAQLTRSELESLQKLPDVIAIRPDRRL 122 (773)
Q Consensus 43 ~~yIV~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~ngfs~~l~~~~~~~L~~~p~V~~V~~~~~~ 122 (773)
-+|||.|++... . .+.++.. +.++.++|. .+++++++++++.++.|+++|+|++|++|...
T Consensus 2 ~~~IV~f~~~~~--~---------~~~i~~~-------gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v 62 (65)
T 2z30_B 2 IRVIVSVDKAKF--N---------PHEVLGI-------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQA 62 (65)
T ss_dssp EEEEEEECGGGC--C---------GGGGGGG-------TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEE
T ss_pred eeEEEEEcCcch--h---------HHHHHHC-------CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEE
Confidence 479999987521 1 1134334 788999998 79999999999999999999999999999876
Q ss_pred c
Q 004101 123 Q 123 (773)
Q Consensus 123 ~ 123 (773)
+
T Consensus 63 ~ 63 (65)
T 2z30_B 63 V 63 (65)
T ss_dssp E
T ss_pred E
Confidence 4
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.75 E-value=0.0088 Score=53.76 Aligned_cols=64 Identities=22% Similarity=0.288 Sum_probs=52.5
Q ss_pred cceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEEEEEE
Q 004101 680 KKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQLAWV 754 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~l~~~ 754 (773)
+...+.+++|+|+|+.+..|++....| .+++|+..++. +|++..++|+|.+... ..+.+.|...
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L~-pg~~~~i~V~F~P~~~------g~~~~~l~v~ 103 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTLN-VGESMQLEVEFEPQSV------GDHSGRLIVC 103 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEEC-TTCEEEEEEEECCSSS------BCCCCBCEEE
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEEC-CCCEEEEEEEEEcCCC------ccEEEEEEEE
Confidence 346888999999999999998776433 55689999998 8999999999999976 5677777765
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=95.92 E-value=0.036 Score=60.99 Aligned_cols=72 Identities=19% Similarity=0.217 Sum_probs=58.6
Q ss_pred CCCCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcccc---cccccccEEEEehhhHHHHHHHHh
Q 004101 412 LPIAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEEDS---VDVHVLPATLVGFAESVRLKVYIN 483 (773)
Q Consensus 412 ~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~---~~~~~~p~~~i~~~~g~~l~~~~~ 483 (773)
+...+++|||+|+.++.|.+.+|..+++.+||.|+|++++........ .....+|...++.++++.|.+++.
T Consensus 108 ~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 434589999999999999999999999999999999999863221111 134568999999999999999984
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.04 E-value=0.09 Score=58.22 Aligned_cols=102 Identities=10% Similarity=0.173 Sum_probs=69.8
Q ss_pred CceeEEEEecCCCCCCCcccCCCCCCCcccceEEEEecCCCc---------hhhH----HHHHHHcCceEEEEeccCCCC
Q 004101 389 EKELDLIYVTGGDGGSEFCLKGSLPIAEVRGKMVVCDRGVNG---------RAEK----GQVVKEAGGAAMILANTEINL 455 (773)
Q Consensus 389 ~~~~~lv~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~~~~~~~ 455 (773)
...-++|++ .+ ...|.. ....+++|||||+.++.|. +..| ..++.++||+|+|++++....
T Consensus 105 ~vta~lV~v--~~--~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~ 178 (444)
T 3iib_A 105 GLSATIVRF--DT--LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDH 178 (444)
T ss_dssp CEEEEEEEE--SS--HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCC
T ss_pred CeEEEEEec--CC--HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcc
Confidence 456788883 21 112322 2356899999999998874 3444 356899999999999864322
Q ss_pred cc-------c-ccccccccEEEEehhhHHHHHHHHhcCCCcEEEEEecc
Q 004101 456 EE-------D-SVDVHVLPATLVGFAESVRLKVYINSTRRARARIIFGG 496 (773)
Q Consensus 456 ~~-------~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 496 (773)
.. . ......+|++.|+.++++.|.+.+..+...++++....
T Consensus 179 ~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 179 DRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp SSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 11 1 11235689999999999999999988776666665543
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.35 E-value=0.066 Score=61.79 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=54.9
Q ss_pred CcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCCCcc------------------cc----------------c
Q 004101 415 AEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEINLEE------------------DS----------------V 460 (773)
Q Consensus 415 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~------------------~~----------------~ 460 (773)
.+++|||+|+.+|.|.+.+|..+++.+||.|+|++++...... .. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 4799999999999999999999999999999999997532100 00 0
Q ss_pred ccccccEEEEehhhHHHHHHHHh
Q 004101 461 DVHVLPATLVGFAESVRLKVYIN 483 (773)
Q Consensus 461 ~~~~~p~~~i~~~~g~~l~~~~~ 483 (773)
....+|+..|+.++++.|.+.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02358999999999999987653
No 48
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.71 E-value=0.19 Score=43.86 Aligned_cols=68 Identities=12% Similarity=0.039 Sum_probs=51.5
Q ss_pred ceEEEEEEEEecCCCCeeEEEEEEC-CCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEEEEEEE
Q 004101 681 KSTMIRRRLTNVGSPNSIYSVKVTA-PEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQLAWVH 755 (773)
Q Consensus 681 ~~~~~~rtvtn~g~~~~~y~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~l~~~~ 755 (773)
...+.+++++|.|+.+..|++.... +.+...+++|..-.+. +|++++++|+|.+... +.+.-.|++.-
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~-pg~~~~i~V~f~~~~~------g~f~~~i~v~~ 94 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIE-PSGVQAIQISFSSIIL------GNFEEEFLVNV 94 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEEC-TTBCCEEEEEECCCCC------EEEEEEECEEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEEC-CCCEEEEEEEEECCCc------ceEEEEEEEEE
Confidence 3577899999999999999984311 1123466789999887 8999999999999764 45556677763
No 49
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=93.29 E-value=0.11 Score=60.61 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=56.1
Q ss_pred CCcccceEEEEecCCCchhhHHHHHHHcCceEEEEeccCCC----C--------------c----c----cccc------
Q 004101 414 IAEVRGKMVVCDRGVNGRAEKGQVVKEAGGAAMILANTEIN----L--------------E----E----DSVD------ 461 (773)
Q Consensus 414 ~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~----~--------------~----~----~~~~------ 461 (773)
..+++|||+|+.+|.|.+.+|..+++.+||.|+|+|++... + . . ...+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 45799999999999999999999999999999999986320 0 0 0 0000
Q ss_pred ----------------cccccEEEEehhhHHHHHHHHhc
Q 004101 462 ----------------VHVLPATLVGFAESVRLKVYINS 484 (773)
Q Consensus 462 ----------------~~~~p~~~i~~~~g~~l~~~~~~ 484 (773)
...||++.|+..+++.|...+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24689999999999999987653
No 50
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=91.10 E-value=2.9 Score=38.10 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=60.4
Q ss_pred ceEEEEEEEEecCCCCeeEEEEEECC----CCcEEEEecCeeEEecCCcEEEEEEEEEeecc----cCCCCCceEeEEEE
Q 004101 681 KSTMIRRRLTNVGSPNSIYSVKVTAP----EDVEVRIKPQRLIFKYVNQSLIYRIWIISRKR----MTKDRMSFAQGQLA 752 (773)
Q Consensus 681 ~~~~~~rtvtn~g~~~~~y~~~~~~~----~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~----~~~~~~~~~~G~l~ 752 (773)
...+.+++|+|+|..+.+|++..... ..--++++|..-++. +|++.++.|++...+. .+.+ -.-++--|+
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~-Pge~~~I~v~~~v~~~~~~~ln~g-~~~l~diLv 120 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSKDSVTILNSG-EDKIEDILV 120 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCHHHHHHHHHS-SSCSCEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccC-CCCeeEEEEEEEEccCcccccccc-hhhhheeEE
Confidence 35788999999999999999985321 111245579999997 8999999999997542 0100 023455677
Q ss_pred EEEcCCCCccEEEeeEEEEeC
Q 004101 753 WVHSGNSSLYRVRSPISVTWK 773 (773)
Q Consensus 753 ~~~~~~~~~~~v~~P~~~~~~ 773 (773)
+.= .+|. ...+|+...|.
T Consensus 121 L~V-e~G~--d~fI~v~g~~~ 138 (140)
T 3qbt_B 121 LHL-DRGK--DYFLTISGNYL 138 (140)
T ss_dssp EEE-TTSC--EEEEEEEEEEC
T ss_pred EEe-ecCC--cEEEEEecccc
Confidence 652 2444 78899988774
No 51
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=89.52 E-value=1.5 Score=38.65 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=47.0
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeeccc
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRM 739 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~ 739 (773)
.-..++.|.|....+.+|+++++..+++++. .+..+++. +|+..++.|.+..+...
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~-~g~~~~~~v~v~~~~~~ 87 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVE-PGEVLNLPMSLGADPDK 87 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEEC-TTCEEEEEEEEEECGGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEEC-CCCEEEEEEEEEEChHH
Confidence 4567899999999999999999988787764 35568887 89999999999998753
No 52
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=89.29 E-value=1.8 Score=42.68 Aligned_cols=82 Identities=10% Similarity=0.076 Sum_probs=56.7
Q ss_pred ceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEEEEEEEc---C
Q 004101 681 KSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQLAWVHS---G 757 (773)
Q Consensus 681 ~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~l~~~~~---~ 757 (773)
+..+.+++++|.|+.+.+++... .|..+++..+|. ++. +|++.+++|++........ +...+.|+...- +
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~--~I~-PG~~g~I~vt~~~~~~~~~---G~~~~~i~v~~~~~~~ 91 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAF--RLQ-AREPRELNLSLAVPRNMPP---GMKDEPLVLEVTSPET 91 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEE--EEC-SSSCEEEEEEECCCTTCCS---EEEEEEEEEEEECTTT
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcc--eeC-CCCceEEEEEEcchhcccC---CceeeEEEEEEEcCCC
Confidence 35677999999999999988754 477766654444 454 8999999999988876333 677888888631 1
Q ss_pred CCCccEEEeeEEE
Q 004101 758 NSSLYRVRSPISV 770 (773)
Q Consensus 758 ~~~~~~v~~P~~~ 770 (773)
+.. ...++|+..
T Consensus 92 ~~~-~~~~i~v~g 103 (220)
T 2qsv_A 92 GKK-AVDSVMVSL 103 (220)
T ss_dssp CCE-EEEEEEEEE
T ss_pred Ccc-cccEEEEEE
Confidence 222 344566554
No 53
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.27 E-value=0.36 Score=59.46 Aligned_cols=25 Identities=20% Similarity=0.452 Sum_probs=23.2
Q ss_pred cCCCCCccEEEEEccCCCCCCCCCC
Q 004101 145 ESQFGHGSIIGVLDTGIWPESPSFD 169 (773)
Q Consensus 145 ~~~~G~gv~VaVIDTGid~~Hp~f~ 169 (773)
..+.|+||+|||+|||||+.+|.|.
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3678999999999999999999997
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=84.68 E-value=8.8 Score=40.89 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=58.9
Q ss_pred ceEEEEEEEEecCCCCeeEEEEEECCCCcE----EEEecCeeEEecCCcEEEEEEEEEeeccc----C--CCCCceEeEE
Q 004101 681 KSTMIRRRLTNVGSPNSIYSVKVTAPEDVE----VRIKPQRLIFKYVNQSLIYRIWIISRKRM----T--KDRMSFAQGQ 750 (773)
Q Consensus 681 ~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~----v~v~p~~~~~~~~g~~~~~~vt~~~~~~~----~--~~~~~~~~G~ 750 (773)
..++.++||+|+|..+.+|++......... ++++|..-++. +|++.+++|++...... + . .-.+--
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~-Pge~~~i~l~~~v~~~~~~~ln~g~---~~l~di 121 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSKDSVTILNSGE---DKIEDI 121 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCTTTHHHHHHTS---SCSCEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEEC-CCCEEEEEEEEEECHHHHHHHhcCc---cccceE
Confidence 368889999999999999999654322111 56689999887 89999999999887621 1 1 234455
Q ss_pred EEEEEcCCCCccEEEeeEEEEe
Q 004101 751 LAWVHSGNSSLYRVRSPISVTW 772 (773)
Q Consensus 751 l~~~~~~~~~~~~v~~P~~~~~ 772 (773)
|++.= .+|. ...+|+-..|
T Consensus 122 LvL~v-e~G~--d~FI~v~~~~ 140 (366)
T 3qis_A 122 LVLHL-DRGK--DYFLTISGNY 140 (366)
T ss_dssp EEEEE-TTSC--EEEEEEEEEE
T ss_pred EEEEE-eCCC--cEEEEecccc
Confidence 66652 2444 6677776665
No 55
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=84.44 E-value=0.66 Score=51.17 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=25.9
Q ss_pred CCCccccccCCCCCCCCCCcccCceEeCCCceEeccCC
Q 004101 503 RAPAVAQFSARGPSLYTPTILKPDVIAPGVNIIAAWPQ 540 (773)
Q Consensus 503 ~~~~~a~fSs~GP~~~~~~~~KPDI~APG~~I~sa~~~ 540 (773)
..+.++.||++||.. ||+|||++|+++++.
T Consensus 182 ~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp TTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 345899999999865 999999999999874
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=81.22 E-value=18 Score=35.34 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=56.3
Q ss_pred ccCCCceeEE-eecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCC
Q 004101 666 SLNYPSISVV-FKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRM 744 (773)
Q Consensus 666 ~ln~ps~~~~-~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~ 744 (773)
.+. ..+.+. +. +...+.+++++|+|+.+...+--...-....+..... .+. +||+.+++|++.+... .
T Consensus 121 ~~~-~~~dfG~i~--g~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~~~--~i~-PGe~~~i~v~~~~~~~-~---- 189 (220)
T 2qsv_A 121 ELS-TYLDMGQLD--GETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDRT--EIK-PGGSTLLRIAVDPQVM-K---- 189 (220)
T ss_dssp ECC-CEEEEEECT--TSCEEEEEEEEECSSSCEEEEEEEECSTTEEEEESCS--EEC-TTCEEEEEEEECHHHH-H----
T ss_pred EEE-eEEeeeccC--CCeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecCCc--cCC-CCCEEEEEEEEecCCC-C----
Confidence 455 555555 33 3468889999999999877643333334555555443 454 8999999999987644 1
Q ss_pred ce----EeEEEEEEEcCCCCccEEEeeEE
Q 004101 745 SF----AQGQLAWVHSGNSSLYRVRSPIS 769 (773)
Q Consensus 745 ~~----~~G~l~~~~~~~~~~~~v~~P~~ 769 (773)
+. ....|+... .+.....+++.|-
T Consensus 190 g~~~~~~~~~i~v~~-N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 190 AEGWQSIAADISIIC-NDPQAPLRRIKVK 217 (220)
T ss_dssp HTTCSEEEEEEEEEE-SCTTCSEEEEEEE
T ss_pred CcccceeccEEEEEE-CCCCCcEEEEEEE
Confidence 23 566777653 2333134455543
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=74.17 E-value=13 Score=33.09 Aligned_cols=52 Identities=10% Similarity=0.041 Sum_probs=37.0
Q ss_pred cceEEEEEEEEecCCCC-eeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEe
Q 004101 680 KKSTMIRRRLTNVGSPN-SIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIIS 735 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~-~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 735 (773)
++..+++.+|+|.|..+ ..|++.+-. .|-.+.-. ...+. +|+++++++++.+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La-~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLG-PKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEEC-TTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccC-CCCeEEEEEEEEc
Confidence 44799999999999866 568887655 44444332 34565 8899988888764
No 58
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=68.99 E-value=20 Score=41.70 Aligned_cols=56 Identities=16% Similarity=0.056 Sum_probs=37.1
Q ss_pred eEEEEEEEEecCCCCeeEEE--EEECCCC-----cEEEEecCeeEEecCCcEEEEEEEEEeecc
Q 004101 682 STMIRRRLTNVGSPNSIYSV--KVTAPED-----VEVRIKPQRLIFKYVNQSLIYRIWIISRKR 738 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~--~~~~~~g-----~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~ 738 (773)
..+++++|||+|+.+..-.+ -+..|.+ ++--.--+++.+. +||+++++++++..+.
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~-pGes~~V~~~l~~~~l 676 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLT-PGQSGTATFNIRRRDL 676 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEEC-TTCEEEEEEEEEGGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeC-CCCeEEEEEEEcHHHe
Confidence 57899999999987765544 3454432 1112223344555 9999999999987654
No 59
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=68.82 E-value=12 Score=43.81 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=46.2
Q ss_pred cccccCCCceeEEe---ecCcceEEEEEEEEecCCCCeeEE--EEEECCCC-----cEEEEecCee-EEecCCcEEEEEE
Q 004101 663 RGFSLNYPSISVVF---KHGKKSTMIRRRLTNVGSPNSIYS--VKVTAPED-----VEVRIKPQRL-IFKYVNQSLIYRI 731 (773)
Q Consensus 663 ~~~~ln~ps~~~~~---~~~~~~~~~~rtvtn~g~~~~~y~--~~~~~~~g-----~~v~v~p~~~-~~~~~g~~~~~~v 731 (773)
-++-|.|-+|..+. ...+...+++++|||+|+.+..-. +-+..|.+ ++--.--+++ .+ ++||++++++
T Consensus 594 FG~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~ 672 (721)
T 2x41_A 594 FGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVL 672 (721)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEE
T ss_pred cCCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEE
Confidence 34468888877652 112336899999999998664433 34454432 1111122234 34 4899999999
Q ss_pred EEEeecc
Q 004101 732 WIISRKR 738 (773)
Q Consensus 732 t~~~~~~ 738 (773)
++...+.
T Consensus 673 ~l~~~~l 679 (721)
T 2x41_A 673 EIPVRDL 679 (721)
T ss_dssp EEEGGGG
T ss_pred EECHHHh
Confidence 9988654
No 60
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.81 E-value=46 Score=29.18 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=37.2
Q ss_pred cceEEEEEEEEecCCCCee--------EEEEEECCCCcEEE---------EecCeeEEecCCcEEEEEEEEEe
Q 004101 680 KKSTMIRRRLTNVGSPNSI--------YSVKVTAPEDVEVR---------IKPQRLIFKYVNQSLIYRIWIIS 735 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~~~--------y~~~~~~~~g~~v~---------v~p~~~~~~~~g~~~~~~vt~~~ 735 (773)
++...++++|+|.++.+.+ |.+.+....|-.|- -.....++. +||+++|++++..
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~-pGE~~~f~~~w~~ 88 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLE-SGETYDFSDVWKE 88 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEEC-TTCEEEEEEEESS
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEEC-CCCEEEEEEEeCC
Confidence 3468899999999987655 44445544554443 112245665 8999999999984
No 61
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=61.04 E-value=29 Score=30.67 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=43.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
.++-+++|+|.++....|++.-+.|.-. .|.|..=.+. +|++.++.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i~-P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVID-PGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEEC-TTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEEC-CCCeEEEEEEECcC
Confidence 5778899999999999999998888654 4578876665 89999999999875
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=60.60 E-value=25 Score=32.21 Aligned_cols=53 Identities=23% Similarity=0.160 Sum_probs=44.0
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeec
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRK 737 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 737 (773)
.++-+++|+|..+....|++.-+.|.-.. |.|..=.+. +|++.++.|++.+..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~-P~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSCD-PGASIDIIVSPHGGL 88 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEEC-TTCEEEEEEEECSSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEEC-CCCeEEEEEEecCcc
Confidence 45668999999999999999998887654 578877776 899999999998753
No 63
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=58.90 E-value=44 Score=28.69 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=41.6
Q ss_pred EEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeec
Q 004101 684 MIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRK 737 (773)
Q Consensus 684 ~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 737 (773)
+.+++|+|..+....|++.-..|.-.. |.|..=.+. +|++.++.|+..+..
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I~-P~~~~~i~I~~q~~~ 68 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFVD-PSGSKDVVITRTAGA 68 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEEC-TTEEEEEEEEECSCC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEEC-CCCeEEEEEEeCCCC
Confidence 468899999999999999988887655 468765554 899999999988743
No 64
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=56.24 E-value=28 Score=31.63 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=43.5
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
.++-.++|+|..+....|++.-+.|.-.. |.|..=.+. +|++.++.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI~-P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGIID-PGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEECC-TTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEEC-CCCeEEEEEEECCC
Confidence 46678999999999999999999887655 578876665 89999999999874
No 65
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=56.17 E-value=37 Score=29.95 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=43.5
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
..+-.++|+|.++....|.+.-+.|.-. .|.|..-.+. +|++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii~-P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVLD-PKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEEC-TTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEEC-CCCEEEEEEEecCC
Confidence 4566889999999999999999888765 4578877776 89999999998884
No 66
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=54.52 E-value=33 Score=29.89 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=41.8
Q ss_pred EEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeec
Q 004101 683 TMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRK 737 (773)
Q Consensus 683 ~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 737 (773)
.+.+++|+|..+....|+++-..|.-..| .|..-.+ ++|++.++.|+..+..
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~YrV--rP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEHYRV--RPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTTEEE--ECSEEEE-CTTCEEEEEEEECSCC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCceEE--cCCceEE-CCCCeEEEEEEeCCCC
Confidence 35688999999999999999888877654 6875555 4899999999998753
No 67
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=53.20 E-value=62 Score=36.47 Aligned_cols=77 Identities=12% Similarity=-0.007 Sum_probs=50.2
Q ss_pred CCceeEEeecCcceEEEEEEEEecCCCCeeE-EEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceE
Q 004101 669 YPSISVVFKHGKKSTMIRRRLTNVGSPNSIY-SVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFA 747 (773)
Q Consensus 669 ~ps~~~~~~~~~~~~~~~rtvtn~g~~~~~y-~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~ 747 (773)
.|.+++.- +++.+++.+|+|-+..+... ++++..|.+.+++. ....+. +|++.+++|+|+.+..... +.+
T Consensus 364 ~~~~~~~~---g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~g~~~t~~~~vt~~~~~~~---g~y 434 (601)
T 1w8o_A 364 IPDVALEP---GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLM-PGRQAKGQVTITVPAGTTP---GRY 434 (601)
T ss_dssp CCCEEECT---TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBC-TTCEEEEEEEEECCTTCCC---EEE
T ss_pred CccceecC---CceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccC-CCCceEEEEEEecCCCCCC---CcE
Confidence 35555442 23788999999987654332 44566788888876 334454 7999999999999875433 344
Q ss_pred eEEEEEE
Q 004101 748 QGQLAWV 754 (773)
Q Consensus 748 ~G~l~~~ 754 (773)
.=.+.+.
T Consensus 435 ~l~~~~~ 441 (601)
T 1w8o_A 435 RVGATLR 441 (601)
T ss_dssp EEEEEEE
T ss_pred EeeEEEE
Confidence 4445555
No 68
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=52.46 E-value=64 Score=27.23 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=45.1
Q ss_pred ceeEEeecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCCcEEEEEEEEEeecccCCCCCceEeEE
Q 004101 671 SISVVFKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVNQSLIYRIWIISRKRMTKDRMSFAQGQ 750 (773)
Q Consensus 671 s~~~~~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~ 750 (773)
.+++.|.+. ...+++||+|-..+...|.=.+..|.-+.+.+ . ..++-+|+|.+.... .++.|.
T Consensus 35 vlsV~F~~~--~~~vTItItNe~TG~~VYs~~~s~p~~i~IdL-------n-ge~sG~Y~IeI~~~~-------~~LtG~ 97 (101)
T 3sd2_A 35 ILNVSFGRA--KDYAIITVTNKATGEIVHSKTYHNTSIVMIDM-------S-SCEKGEYTIHIILND-------CLLEGT 97 (101)
T ss_dssp EEEEEESSC--CSCEEEEEEETTTCCEEEEEEESSCSEEEEEC-------T-TSCSEEEEEEEEETT-------EEEEEE
T ss_pred EEEEEeccC--CCcEEEEEEECCCCcEEEEEeccCCcEEEEEc-------C-CCcCceEEEEEEeCC-------cEEEEE
Confidence 567777733 46689999999888889988777654333322 2 335778888887764 477777
Q ss_pred EEE
Q 004101 751 LAW 753 (773)
Q Consensus 751 l~~ 753 (773)
.+.
T Consensus 98 F~i 100 (101)
T 3sd2_A 98 FTV 100 (101)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 69
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=45.50 E-value=61 Score=38.41 Aligned_cols=161 Identities=17% Similarity=0.128 Sum_probs=84.1
Q ss_pred ceEEeccccchhhhhHHHHHHHHHhCCCCC-HHHHHHHHHhccccCCCCCC-cccCCC----CCcc-cccCCCCc-cccC
Q 004101 555 NFTVMSGTSMACPHVSGITALIRSAYPKWS-PAAIKSAIMTTADGNDHFGK-PIMDGN----KPPA-VKAINPGL-IYDI 626 (773)
Q Consensus 555 ~y~~~sGTSmAaP~VAG~aALl~~~~P~~s-~~~ik~~L~~TA~~~~~~g~-~~~~~~----~~a~-~~a~~~Gl-v~~~ 626 (773)
-...++|..++-|.+.-+.|+|...+|..- ...|-++|.--..|- |+ |+.-+. .|+. +.....|- .|.+
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPS---GkLP~T~p~~~~d~P~~~~~~~~~g~~~y~e 694 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPN---GKLSLSWPFKLQDNPAFLNFKTEFGRVIYGE 694 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCC---CCCSSCBCSSGGGSTTTTSCSCBTTEEECTT
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCC---CCCceeeeCchhhCCccccCCCCCCceeccC
Confidence 456778888888888888888998998775 577777776554432 32 221110 1110 00000010 0111
Q ss_pred Cc-cccccccccCCCCccceeEeecccccccccccCCcccccCCCceeEE--eec-CcceEEEEEEEEecC-CCCeeEEE
Q 004101 627 TP-DEYVTHLCTLGYTESEIFTITHRNVSCHENLRMNRGFSLNYPSISVV--FKH-GKKSTMIRRRLTNVG-SPNSIYSV 701 (773)
Q Consensus 627 ~~-~dy~~~~~~~g~~~~~i~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~--~~~-~~~~~~~~rtvtn~g-~~~~~y~~ 701 (773)
.. .+|--|. . ......++-++-|.|-+|..+ ... .....+++++|||+| +.+..-.+
T Consensus 695 g~~vgYR~y~--------------~----~~~~plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVv 756 (845)
T 3abz_A 695 DIFVGYRYYE--------------K----LQRKVAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVV 756 (845)
T ss_dssp TTCCTHHHHH--------------H----HTCCCSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEE
T ss_pred CccCCCcchh--------------c----CCCceeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceee
Confidence 10 0010000 0 000112233446888888766 211 023689999999999 76655433
Q ss_pred --EEECCCC-----cEEEEecCeeEEecCCcEEEEEEEEE-eec
Q 004101 702 --KVTAPED-----VEVRIKPQRLIFKYVNQSLIYRIWII-SRK 737 (773)
Q Consensus 702 --~~~~~~g-----~~v~v~p~~~~~~~~g~~~~~~vt~~-~~~ 737 (773)
-+..|.+ ++--.--+++.+. +||++++++++. ..+
T Consensus 757 QlYv~~~~~~~~~P~k~L~gF~kv~L~-pGes~~V~~~l~~~~~ 799 (845)
T 3abz_A 757 QVYFSALNSKVSRPVKELKGFEKVHLE-PGEKKTVNIDLELKDA 799 (845)
T ss_dssp EEEEEESSCSSCCCSCEEEEEEEEEEC-TTCEEEEEEEEEHHHH
T ss_pred eeeEeCCCCCcchhhheeccceeEEEC-CCCEEEEEEEeCChHH
Confidence 3343321 1111222344554 999999999999 543
No 70
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=43.21 E-value=20 Score=27.22 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=28.0
Q ss_pred ccchhhhhHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 004101 562 TSMACPHVSGITALIRSAYPKWSPAAIKSAIMTTAD 597 (773)
Q Consensus 562 TSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~ 597 (773)
.|-..|..--....|++.||+++...|+..|...-.
T Consensus 2 ~~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 2 SSGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp CSCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 344445555677889999999999999999987643
No 71
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=41.38 E-value=8 Score=33.95 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=36.4
Q ss_pred EEEEEEEEecCCCCeeEEEEEE-CCCCcEEEEecCeeEEe-cCCcEEEEEEEEEeecc
Q 004101 683 TMIRRRLTNVGSPNSIYSVKVT-APEDVEVRIKPQRLIFK-YVNQSLIYRIWIISRKR 738 (773)
Q Consensus 683 ~~~~rtvtn~g~~~~~y~~~~~-~~~g~~v~v~p~~~~~~-~~g~~~~~~vt~~~~~~ 738 (773)
..+..-++|.+.+..+..+.++ .|.|++++++|+++++. ..-++++|.|+++....
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g~ 112 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMINL 112 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECCC
Confidence 4445555666654444444566 78999999999988775 23356677776665544
No 72
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=38.95 E-value=1e+02 Score=26.70 Aligned_cols=25 Identities=12% Similarity=0.336 Sum_probs=18.0
Q ss_pred cceEEEEEEEEecCCCC-eeEEEEEE
Q 004101 680 KKSTMIRRRLTNVGSPN-SIYSVKVT 704 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~-~~y~~~~~ 704 (773)
++..+++.+|+|.|... ..+++.+-
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEE
Confidence 34789999999999754 44665543
No 73
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=35.63 E-value=41 Score=28.18 Aligned_cols=16 Identities=19% Similarity=0.136 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004101 682 STMIRRRLTNVGSPNS 697 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~ 697 (773)
..+++++|+|.|+.+.
T Consensus 19 r~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 19 RATCRVVVENHGDRPI 34 (101)
T ss_dssp CCEEEEEEEECSSSCE
T ss_pred CCEEEEEEEeCCCcce
Confidence 4678899999999874
No 74
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=34.88 E-value=62 Score=26.77 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=22.4
Q ss_pred EEEEecCeeEEecCCcEEEEEEEEEeecc
Q 004101 710 EVRIKPQRLIFKYVNQSLIYRIWIISRKR 738 (773)
Q Consensus 710 ~v~v~p~~~~~~~~g~~~~~~vt~~~~~~ 738 (773)
.|+++|..+++. .|++.+++.++.+...
T Consensus 8 ~i~l~~~~~~l~-vG~t~~L~atv~P~~A 35 (91)
T 2l04_A 8 GMTVTPASTSVV-KGQSTTLTVAFQPEGV 35 (91)
T ss_dssp CEEEECCCEEEE-TTCEEEEEEEECCSSC
T ss_pred EEEEeCCceEEE-cCCEEEEEEEEecccc
Confidence 366788888887 8999888888887665
No 75
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=34.05 E-value=95 Score=32.38 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=34.1
Q ss_pred cceEEEEEEEEecCCCCee---EE-EEEE------------CC------CCcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 680 KKSTMIRRRLTNVGSPNSI---YS-VKVT------------AP------EDVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~~~---y~-~~~~------------~~------~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
+.+.+++++|||.|+.+.. |+ +.+. .| .|+ +|+|++= + .+||+++++|+++-.
T Consensus 263 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL--~vsd~~p-I-~PGETr~~~v~a~da 337 (382)
T 1yew_A 263 GRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGL--SVSDNSP-L-APGETRTVDVTASDA 337 (382)
T ss_dssp CSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCE--EESCCSC-B-CTTCEEEEEEEEECH
T ss_pred CcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCc--eeCCCCC-c-CCCceeEEEEEeehH
Confidence 4478899999999998754 21 1211 12 143 5556541 2 489999999888763
No 76
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=32.43 E-value=2.3e+02 Score=24.09 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=46.9
Q ss_pred ceeEEeecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEecCeeEEecCC-cEEEEEEEEEeecccCCCCCceEeE
Q 004101 671 SISVVFKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKPQRLIFKYVN-QSLIYRIWIISRKRMTKDRMSFAQG 749 (773)
Q Consensus 671 s~~~~~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g-~~~~~~vt~~~~~~~~~~~~~~~~G 749 (773)
.+++.|. .....++++|+|-..+...|+=.+..+.+-.++++= .+ .+-+|++.++.... .++.|
T Consensus 39 ~L~I~F~--~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L-------~~~~~G~Y~L~i~~~~~------~~l~G 103 (108)
T 3d33_A 39 LLTLKNA--SPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISI-------ANFPAEEYKLEITGTPS------GHLTG 103 (108)
T ss_dssp EEEEEES--SCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEEC-------TTSCSEEEEEEEEEESS------CEEEE
T ss_pred EEEEEEC--CcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEc-------CCccCceEEEEEEeCCC------CEEEE
Confidence 3456665 224678999998877788999888766554444322 23 47788899888755 68888
Q ss_pred EEEE
Q 004101 750 QLAW 753 (773)
Q Consensus 750 ~l~~ 753 (773)
...+
T Consensus 104 ~F~i 107 (108)
T 3d33_A 104 YFTK 107 (108)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 77
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=31.25 E-value=3.2e+02 Score=28.86 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=33.5
Q ss_pred cceEEEEEEEEecCCCCee---EE-EEEE------------CC------CCcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 680 KKSTMIRRRLTNVGSPNSI---YS-VKVT------------AP------EDVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 680 ~~~~~~~rtvtn~g~~~~~---y~-~~~~------------~~------~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
+...+++++|||.|+.+.. |+ +.+. .| .| ++ +|+ -+. +||+++++|+++-.
T Consensus 297 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI~-PGETrt~~V~a~da 369 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VIA-PGESKEIVVKIQDA 369 (419)
T ss_dssp SSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CBC-TTCEEEEEEEEECH
T ss_pred CcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--CcC-CCcceEEEEEeehH
Confidence 4478899999999998854 22 1111 11 24 34 565 444 89999988887763
No 78
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=31.18 E-value=1.9e+02 Score=28.58 Aligned_cols=66 Identities=18% Similarity=0.083 Sum_probs=44.4
Q ss_pred ccCCCceeEEeecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEe-----cCeeEEecCCcEEEEEEEEEee
Q 004101 666 SLNYPSISVVFKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIK-----PQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 666 ~ln~ps~~~~~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~-----p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
++|.|.... - ++...+..+|.|..+.....++.+...+++..... ..++.+. +++++++.+.+.+.
T Consensus 85 ~~~LP~sv~-r---GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v~-a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 85 DLQMPYSVV-K---NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIK-ALSSRAVPFVIVPL 155 (252)
T ss_dssp EECCCSCEE-T---TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEEC-TTEEEEEEEEEEEC
T ss_pred EcCCCcEEe-e---CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEEC-CCCeEEEEEEEEec
Confidence 688888443 1 34688999999999888888888776665544321 2235565 67777777777653
No 79
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=30.75 E-value=2.1e+02 Score=28.53 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=38.3
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECCC--------CcEEEEecCeeEEecCCcEEEEEEEEEee
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAPE--------DVEVRIKPQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~~--------g~~v~v~p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
....+++|+|.++.+.--.+-++... ..-+.++|..+.+. +|+++.+.|.....
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~-pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVE-PNGGAVLRIAYLKA 104 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEEC-TTEEEEEEEEECCC
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEEC-CCCceEEEEEECCC
Confidence 35678999999886544344344321 23488999999997 89999999876654
No 80
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=30.72 E-value=2.5e+02 Score=23.82 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=23.5
Q ss_pred EEEEEEEEecCCCCe-eEEEEEECCCCcEEE
Q 004101 683 TMIRRRLTNVGSPNS-IYSVKVTAPEDVEVR 712 (773)
Q Consensus 683 ~~~~rtvtn~g~~~~-~y~~~~~~~~g~~v~ 712 (773)
.+.+++|+|.|..+. .|+++...|.|.+|+
T Consensus 17 f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 17 ASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp EEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred EEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 667889999997664 499999988776554
No 81
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=29.55 E-value=46 Score=29.09 Aligned_cols=16 Identities=19% Similarity=0.218 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004101 682 STMIRRRLTNVGSPNS 697 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~ 697 (773)
..+++++|+|+|+.+.
T Consensus 25 r~~~~l~V~NtGDRPI 40 (126)
T 4ubp_B 25 REKTTIRVSNTGDRPI 40 (126)
T ss_dssp SCEEEEEEEECSSSCE
T ss_pred CcEEEEEEEeCCCCCE
Confidence 4667999999999874
No 82
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=29.55 E-value=46 Score=29.09 Aligned_cols=16 Identities=19% Similarity=0.218 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004101 682 STMIRRRLTNVGSPNS 697 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~ 697 (773)
..+++++|+|+|+.+.
T Consensus 25 r~~~~l~V~NtGDRPI 40 (126)
T 4ac7_B 25 REKTTIRVSNTGDRPI 40 (126)
T ss_dssp SCEEEEEEEECSSSCE
T ss_pred CcEEEEEEEeCCCCCE
Confidence 4667999999999874
No 83
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.98 E-value=42 Score=30.85 Aligned_cols=30 Identities=23% Similarity=0.301 Sum_probs=26.0
Q ss_pred cccchhhhhHHHHHHHHHhCCCCCHHHHHHH
Q 004101 561 GTSMACPHVSGITALIRSAYPKWSPAAIKSA 591 (773)
Q Consensus 561 GTSmAaP~VAG~aALl~~~~P~~s~~~ik~~ 591 (773)
|-| =|+.|-|++|||.+.+-+.+|+||.+.
T Consensus 81 adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 81 GDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp EEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred eCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 444 389999999999999999999999763
No 84
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=24.62 E-value=4e+02 Score=31.67 Aligned_cols=66 Identities=18% Similarity=0.087 Sum_probs=49.0
Q ss_pred ccCCCceeEEeecCcceEEEEEEEEecCC-CCeeEEEEEECCCCcEEEEe-----cCeeEEecCCcEEEEEEEEEee
Q 004101 666 SLNYPSISVVFKHGKKSTMIRRRLTNVGS-PNSIYSVKVTAPEDVEVRIK-----PQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 666 ~ln~ps~~~~~~~~~~~~~~~rtvtn~g~-~~~~y~~~~~~~~g~~v~v~-----p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
++|.|.+.. - ++..++..+|.|..+ .....++++...+++.+.-. +.+++++ +++++++.+.+.+.
T Consensus 84 ~~~LP~~v~-~---GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l~-~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 84 DLRLPYSVV-R---NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIP-PKSSLSVPYVIVPL 155 (915)
T ss_dssp EEECCSEEE-T---TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEEC-TTEEEEEEEEEEEC
T ss_pred EccCCCEEe-c---CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEEC-CCCeEEEEEEEEEC
Confidence 678887433 1 346889999999999 99999999987777654321 3467776 78888888888863
No 85
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.84 E-value=40 Score=30.43 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=27.9
Q ss_pred EEeccccchhhhhHHHHHHHHHhCCCCCHHHHHH
Q 004101 557 TVMSGTSMACPHVSGITALIRSAYPKWSPAAIKS 590 (773)
Q Consensus 557 ~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~ 590 (773)
..+.|-| =|+.|-|++|||.+.+-+.+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4445666 38999999999999999999999975
No 86
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=21.30 E-value=4.9e+02 Score=24.92 Aligned_cols=53 Identities=8% Similarity=0.029 Sum_probs=37.5
Q ss_pred eEEEEEEEEecCCC-CeeEEEEEECCC-----CcEEEEecCeeEEecCCcEEEEEEEEEe
Q 004101 682 STMIRRRLTNVGSP-NSIYSVKVTAPE-----DVEVRIKPQRLIFKYVNQSLIYRIWIIS 735 (773)
Q Consensus 682 ~~~~~rtvtn~g~~-~~~y~~~~~~~~-----g~~v~v~p~~~~~~~~g~~~~~~vt~~~ 735 (773)
....+++|+|.++. +.--.+-++... ..-+.++|..+.+. +|+++.+.|....
T Consensus 15 ~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~-p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 15 EKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLE-PGAKSMVRLSTTP 73 (218)
T ss_dssp SSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEEC-TTCEEEEEEEECG
T ss_pred CCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEEC-CCCceEEEEEecC
Confidence 45678899999875 544444444332 12367899999997 8999999887765
No 87
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=21.10 E-value=2.2e+02 Score=35.99 Aligned_cols=66 Identities=11% Similarity=-0.006 Sum_probs=50.8
Q ss_pred ccCCCceeEEeecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEe---cCeeEEecCCcEEEEEEEEEee
Q 004101 666 SLNYPSISVVFKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIK---PQRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 666 ~ln~ps~~~~~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~---p~~~~~~~~g~~~~~~vt~~~~ 736 (773)
+++.|.+... ++..++..+|.|..+....+++++...+++.+.-. ..++.+. +++++++.+.+.+.
T Consensus 772 ~~~LP~sv~r----GE~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l~-~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 772 ELTMPYSVIR----GEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCIC-ANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEECCSEEES----SSCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEEC-TTEEEEEEEEEEEC
T ss_pred EccCCceEec----CCEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEEC-CCCeEEEEEEEEEC
Confidence 6788875431 34688999999999999999999988878776532 4567887 78888888888764
No 88
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=20.45 E-value=3.6e+02 Score=25.97 Aligned_cols=55 Identities=9% Similarity=0.058 Sum_probs=37.6
Q ss_pred eEEEEEEEEecCCCCeeEEEEEECC-----CCcEEEEecCeeEEecCCcEEEEEEEEEeec
Q 004101 682 STMIRRRLTNVGSPNSIYSVKVTAP-----EDVEVRIKPQRLIFKYVNQSLIYRIWIISRK 737 (773)
Q Consensus 682 ~~~~~rtvtn~g~~~~~y~~~~~~~-----~g~~v~v~p~~~~~~~~g~~~~~~vt~~~~~ 737 (773)
...++++|+|.++.+.--..-++.. ...-+.++|..+.+. +|+++.+.|..+...
T Consensus 27 ~k~~sl~l~N~~~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~-p~~~q~lRI~~~~~~ 86 (218)
T 4ay0_A 27 AAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLD-AKQQNSLRIAQAGGV 86 (218)
T ss_dssp CSCEEEEEECCSSSCEEEEEEEECTTSCCCSSCSEEEESSEEEEC-TTCEEEEEEEECSCC
T ss_pred CcEEEEEEEcCCCCCEEEEEEEecCCCCccccCCEEECCCeEEeC-CCCceEEEEEecCCC
Confidence 3557889999887654444444322 112367899999997 899999998776544
No 89
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=20.37 E-value=90 Score=36.52 Aligned_cols=66 Identities=17% Similarity=0.082 Sum_probs=44.8
Q ss_pred ccCCCceeEEeecCcceEEEEEEEEecCCCCeeEEEEEECCCCcEEEEec---CeeEEecCCcEEEEEEEEEee
Q 004101 666 SLNYPSISVVFKHGKKSTMIRRRLTNVGSPNSIYSVKVTAPEDVEVRIKP---QRLIFKYVNQSLIYRIWIISR 736 (773)
Q Consensus 666 ~ln~ps~~~~~~~~~~~~~~~rtvtn~g~~~~~y~~~~~~~~g~~v~v~p---~~~~~~~~g~~~~~~vt~~~~ 736 (773)
++|.|.+.. - ++..++..+|.|..+...+.++.+...+++.+...+ .+++++ +++++++.+.+.+.
T Consensus 157 ~~~lP~~v~-~---GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~-a~~~~~v~f~i~~~ 225 (767)
T 4fxk_B 157 HLRLPMSVR-R---FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLVP-AGSARPVAFSVVPT 225 (767)
T ss_dssp ECCCCSCEE-T---TCEEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCCCEEEEEC-SSCEEECCEEEEEC
T ss_pred ecCCCCeec-c---CCEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCceeEEEEEc-CCCeEEEEEEEEEC
Confidence 788888543 1 346888999999999999999988877666543222 345555 56666666555543
Done!