BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004103
(773 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/632 (52%), Positives = 434/632 (68%), Gaps = 39/632 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 716 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 775
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP++I+ P + L NW EF WAPS+ + Y G P R+++ + S G+FNVL+T
Sbjct: 776 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS--GKFNVLLT 833
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RR+LLTGTP+QN L
Sbjct: 834 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 893
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 894 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLR 953
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG------TGKSKSLQNL 334
R K EVE LP K + ++KCDMSA QK+ Y+ + G + D G +K+L N
Sbjct: 954 RLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNT 1013
Query: 335 SMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFELLDRLLPKLRKSGHR 383
MQLRK CNHPY+F +G N + E+ RASGKFELLDR+LPKLR + HR
Sbjct: 1014 IMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHR 1073
Query: 384 VLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRA 443
VLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN P S YF+FLLSTRA
Sbjct: 1074 VLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRA 1133
Query: 444 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERA 503
GGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL A
Sbjct: 1134 GGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA 1193
Query: 504 KQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDE 562
K K+ +D KVIQAG+F+ S++ +RR L+ I+ + D + E +N++ AR +E
Sbjct: 1194 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREE 1253
Query: 563 EFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGH 613
EF LF +MD +RR+++ + RLME+ E+P W D+ E ++ EK FG
Sbjct: 1254 EFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKIFGR 1311
Query: 614 ESSSITGKRKRKEVVYADTLSDLQWMKAVENG 645
G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1312 ------GSRQRRDVDYSDALTEKQWLRAIEDG 1337
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/632 (52%), Positives = 434/632 (68%), Gaps = 39/632 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q LL G L+ YQL+GL+WM+SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 770
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP++I+ P + L NW EF WAPS+ + Y G P R+++ + S G+FNVL+T
Sbjct: 771 RLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRS--GKFNVLLT 828
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RR+LLTGTP+QN L
Sbjct: 829 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKL 888
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 889 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLR 948
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTG------TGKSKSLQNL 334
R K EVE LP K + ++KCDMSA QK+ Y+ + G + D G +K+L N
Sbjct: 949 RLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNT 1008
Query: 335 SMQLRKCCNHPYLF----------VGEYN-MWRKEEIIRASGKFELLDRLLPKLRKSGHR 383
MQLRK CNHPY+F +G N + E+ RASGKFELLDR+LPKLR + HR
Sbjct: 1009 IMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHR 1068
Query: 384 VLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRA 443
VLLF QMT LM I+E Y +F +LRLDG+TK+E+R LLK+FN P S YF+FLLSTRA
Sbjct: 1069 VLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRA 1128
Query: 444 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERA 503
GGLGLNLQ ADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL A
Sbjct: 1129 GGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA 1188
Query: 504 KQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSDE 562
K K+ +D KVIQAG+F+ S++ +RR L+ I+ + D + E +N++ AR +E
Sbjct: 1189 KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREE 1248
Query: 563 EFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFGH 613
EF LF +MD +RR+++ + RLME+ E+P W D+ E ++ EK FG
Sbjct: 1249 EFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKIFGR 1306
Query: 614 ESSSITGKRKRKEVVYADTLSDLQWMKAVENG 645
G R+R++V Y+D L++ QW++A+E+G
Sbjct: 1307 ------GSRQRRDVDYSDALTEKQWLRAIEDG 1332
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 629 bits (1621), Expect = e-179, Method: Compositional matrix adjust.
Identities = 344/680 (50%), Positives = 451/680 (66%), Gaps = 50/680 (7%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q L+ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 733 RVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 792
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP +I+ P + L NW EF WAPS+ V Y G P R+A + S G+FNVL+T
Sbjct: 793 RINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLT 850
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L
Sbjct: 851 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 910
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 911 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 970
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQN 333
R K EVE LP K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N
Sbjct: 971 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1029
Query: 334 LSMQLRKCCNHPYLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGH 382
MQLRK CNHPY+F E+ + + ++ RASGKFELLDR+LPKLR + H
Sbjct: 1030 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1089
Query: 383 RVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTR 442
+VLLF QMT LM I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTR
Sbjct: 1090 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1149
Query: 443 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILER 502
AGGLGLNLQ+ADTVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL
Sbjct: 1150 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1209
Query: 503 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSD 561
AK K+ +D KVIQAG+F+ S++ +RR L+ I+ D + E +N++ AR +
Sbjct: 1210 AKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHE 1269
Query: 562 EEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFG 612
EEF LF +MD +RR++E + RLME+ E+P W D+ E ++ EK FG
Sbjct: 1270 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFG 1327
Query: 613 HESSSITGKRKRKEVVYADTLSDLQWMKAVENGQDI-------SKLSTRGKRREYLPSEG 665
G R RKEV Y+D+L++ QW+KA+E G K S+R ++R+ G
Sbjct: 1328 R------GSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDS--DAG 1379
Query: 666 NESASNSTGAEKKNLDMKNE 685
+ + ST + K+ + K +
Sbjct: 1380 PSTPTTSTRSRDKDDESKKQ 1399
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 333/630 (52%), Positives = 430/630 (68%), Gaps = 41/630 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q L+ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 741 RVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 800
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP +I+ P + L NW EF WAPS+ V Y G P R+A + S G+FNVL+T
Sbjct: 801 RINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLT 858
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L
Sbjct: 859 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQN 333
R K EVE LP K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N
Sbjct: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1037
Query: 334 LSMQLRKCCNHPYLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGH 382
MQLRK CNHPY+F E+ + + ++ RASGKFELLDR+LPKLR + H
Sbjct: 1038 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 383 RVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTR 442
+VLLF QMT LM I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTR
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 443 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILER 502
AGGLGLNLQ+ADTVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1217
Query: 503 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSD 561
AK K+ +D KVIQAG+F+ S++ +RR L+ I+ D + E +N++ AR +
Sbjct: 1218 AKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHE 1277
Query: 562 EEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFG 612
EEF LF +MD +RR++E + RLME+ E+P W D+ E ++ EK FG
Sbjct: 1278 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFG 1335
Query: 613 HESSSITGKRKRKEVVYADTLSDLQWMKAV 642
G R RKEV Y+D+L++ QW+KA+
Sbjct: 1336 R------GSRHRKEVDYSDSLTEKQWLKAI 1359
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 333/630 (52%), Positives = 430/630 (68%), Gaps = 41/630 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q L+ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 741 RVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 800
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP +I+ P + L NW EF WAPS+ V Y G P R+A + S G+FNVL+T
Sbjct: 801 RINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLT 858
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L
Sbjct: 859 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQN 333
R K EVE LP K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N
Sbjct: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1037
Query: 334 LSMQLRKCCNHPYLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGH 382
MQLRK CNHPY+F E+ + + ++ RASGKFELLDR+LPKLR + H
Sbjct: 1038 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 383 RVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTR 442
+VLLF QMT LM I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTR
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 443 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILER 502
AGGLGLNLQ+ADTVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1217
Query: 503 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE-INRLAARSD 561
AK K+ +D KVIQAG+F+ S++ +RR L+ I+ D + E +N++ AR +
Sbjct: 1218 AKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHE 1277
Query: 562 EEFWLFEKMDEERRQKE----NYRSRLMEDHEVPEWAYSAPDNKEEQK-----GFEKGFG 612
EEF LF +MD +RR++E + RLME+ E+P W D+ E ++ EK FG
Sbjct: 1278 EEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIK--DDAEVERLTCEEEEEKMFG 1335
Query: 613 HESSSITGKRKRKEVVYADTLSDLQWMKAV 642
G R RKEV Y+D+L++ QW+KA+
Sbjct: 1336 R------GSRHRKEVDYSDSLTEKQWLKAI 1359
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 627 bits (1617), Expect = e-179, Method: Compositional matrix adjust.
Identities = 335/663 (50%), Positives = 435/663 (65%), Gaps = 74/663 (11%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V +Q L+ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTIALI YL+E+K
Sbjct: 741 RVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHK 800
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP +I+ P + L NW EF WAPS+ V Y G P R+A + S G+FNVL+T
Sbjct: 801 RINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRS--GKFNVLLT 858
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSL 221
Y+ I++D+ L K++W YMIVDEGHR+KNH C L + + + Y RRLLLTGTP+QN L
Sbjct: 859 TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLPTIF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR 978
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQN 333
R K EVE LP K + ++KCDMSA Q+V Y+ + G V L G+ G +K+L N
Sbjct: 979 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKG-VLLTDGSEKDKKGKGGTKTLMN 1037
Query: 334 LSMQLRKCCNHPYLF------VGEY-----NMWRKEEIIRASGKFELLDRLLPKLRKSGH 382
MQLRK CNHPY+F E+ + + ++ RASGKFELLDR+LPKLR + H
Sbjct: 1038 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 383 RVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTR 442
+VLLF QMT LM I+E Y FK+LRLDG+TK E+RG LLK FN P S YF+FLLSTR
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 443 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILER 502
AGGLGLNLQ+ADTVIIFDSDWNP D QA+DRAHRIGQ+ EVRV L +V S+EE IL
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1217
Query: 503 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRR-------------GTSSLG----- 544
AK K+ +D KVIQAG+F+ S++ +RR L+ I+ G++S
Sbjct: 1218 AKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPP 1277
Query: 545 ----------------TDVPSEREINRLAARSDEEFWLFEKMDEERRQKE----NYRSRL 584
+VP + +N++ AR +EEF LF +MD +RR++E + RL
Sbjct: 1278 PAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRL 1337
Query: 585 MEDHEVPEWAYSAPDNKEEQK-----GFEKGFGHESSSITGKRKRKEVVYADTLSDLQWM 639
ME+ E+P W D+ E ++ EK FG G R RKEV Y+D+L++ QW+
Sbjct: 1338 MEEDELPSWIIK--DDAEVERLTCEEEEEKMFGR------GSRHRKEVDYSDSLTEKQWL 1389
Query: 640 KAV 642
KA+
Sbjct: 1390 KAI 1392
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 332/731 (45%), Positives = 484/731 (66%), Gaps = 48/731 (6%)
Query: 44 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
+ +QP++L GG L+ YQ++GLQWM+SLFNN+LNGILADEMGLGKTIQTI+L+ YL E K
Sbjct: 755 IKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKN 814
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITH 163
+ GP++++ P + L NW +EF+ WAP++ + + G P+ERKA + + + G F+V++T
Sbjct: 815 IRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRA--GEFDVVLTT 872
Query: 164 YDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTI-SGYQIQRRLLLTGTPIQNSLQ 222
++ I+++R L KV+W++MI+DEGHR+KN + L+ T+ + Y RL+LTGTP+QN+L
Sbjct: 873 FEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLP 932
Query: 223 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFIL 279
ELW+LLNF+LP IFNSV++F+EWFN PF + G ++ L++EE LL+IRRLH V+RPF+L
Sbjct: 933 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLL 992
Query: 280 RRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS----KSLQNLS 335
RR K +VEK LP K + ++KC MSA Q++ YQQ+ R+ + K + N
Sbjct: 993 RRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQI 1052
Query: 336 MQLRKCCNHPYLFV---GEYNMWRK--EEIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 390
MQL+K CNHP++F + N R+ ++I R +GKFELLDR+LPKL+ +GHRVL+F QM
Sbjct: 1053 MQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQM 1112
Query: 391 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 450
T++MDI+E +L+ + K+LRLDG TK++ER LL+ FNAPDS Y F+LSTRAGGLGLNL
Sbjct: 1113 TQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNL 1172
Query: 451 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 510
QTADTVIIFD+DWNP D QA+DRAHRIGQK EVR+ L++ S+EEVILERA +K+ ID
Sbjct: 1173 QTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDID 1232
Query: 511 AKVIQAGLFNTTSTAQDRREMLKEIM-----RRGTSSLGTDVP---SEREINRLAARSDE 562
KVIQAG F+ ST++++ +L+ ++ RR G + + EIN + AR+DE
Sbjct: 1233 GKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILARNDE 1292
Query: 563 EFWLFEKMDEERRQKEN---YRSRLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSSI- 618
E + +MDE+R +KE +SRL+E E+P+ YS D E K E ES+++
Sbjct: 1293 EMAVLTRMDEDRSKKEEELGVKSRLLEKSELPDI-YSR-DIGAELKREES----ESAAVY 1346
Query: 619 --TGKRKRKEVVYADTLSDLQWMKAVENGQDISKLSTRGKRREYLPSEGNESASNSTGAE 676
G R+RK Y D +S+ QW++ E D + + + R++ E A + G
Sbjct: 1347 NGRGARERKTATYNDNMSEEQWLRQFEVSDD--EKNDKQARKQRTKKEDKSEAIDGNGEI 1404
Query: 677 K-KNLDMKNE---IFPLASE-------GTSEDTFGSAPKRLRFERRNSESSDIQSVEKSE 725
K +N+D N+ I +++E ++D F S ++ R + ++ E SE
Sbjct: 1405 KGENIDADNDGPRINNISAEDRADTDLAMNDDDFLSKKRKAGRPRGRPKKVKLEGSENSE 1464
Query: 726 HKGVQGSGLNG 736
++ S + G
Sbjct: 1465 PPALESSPVTG 1475
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 311/625 (49%), Positives = 431/625 (68%), Gaps = 31/625 (4%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
+V EQ +++ G L+ YQ++GL+W++SL+NNNLNGILADEMGLGKTIQTI+L+ YL++ K
Sbjct: 760 KVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRK 819
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
V GP++I+ P + LPNW+ EF WAP++ V Y G P R+ ++ + + +FNVL+T
Sbjct: 820 KVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRA--TKFNVLLT 877
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQR-RLLLTGTPIQNSL 221
Y+ +++D+ L K+QW YMI+DEGHR+KNH C L + ++ + I RLLLTGTP+QN L
Sbjct: 878 TYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKL 937
Query: 222 QELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQ-VALTDEEQLLIIRRLHHVIRPFILR 280
ELW+LLNFLLP+IF S FE+WFNAPF G+ V L +EE +LIIRRLH V+RPF+LR
Sbjct: 938 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 997
Query: 281 RKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-------GKSKSLQN 333
R K EVE LP K + I+KCDMSA Q+V Y+ + G V L G+ G +K+L N
Sbjct: 998 RLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKG-VLLTDGSEKGKHGKGGAKALMN 1056
Query: 334 LSMQLRKCCNHPYLF----------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHR 383
+QLRK CNHP++F G + + ++ R SGKFELLDR+LPKL+ + HR
Sbjct: 1057 TIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHR 1116
Query: 384 VLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRA 443
VLLF QMT+ M I+E YL F +LRLDG+TK E+RG LL++FNA S F+FLLSTRA
Sbjct: 1117 VLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRA 1176
Query: 444 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERA 503
GGLGLNLQTADTV+IFDSDWNP D QA+DRAHRIGQ+ EVRV L++V S+EE IL A
Sbjct: 1177 GGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAA 1236
Query: 504 KQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSERE--INRLAARSD 561
+ K+ +D KVIQAG+F+ ST +R++ L+ I+ + + + + IN + ARS+
Sbjct: 1237 RYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSE 1296
Query: 562 EEFWLFEKMDEERRQKENY----RSRLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSS 617
EE +F++MD ER++++ R RL+++ E+P+W D E F + ++
Sbjct: 1297 EEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVER---FHYQYDEDTIL 1353
Query: 618 ITGKRKRKEVVYADTLSDLQWMKAV 642
G R+RKEV Y D+L++ +W+KA+
Sbjct: 1354 GRGSRQRKEVDYTDSLTEKEWLKAI 1378
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/695 (46%), Positives = 438/695 (63%), Gaps = 61/695 (8%)
Query: 44 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
VTEQP++L GG+L+ YQL GLQWM+SL+NN+LNGILADEMGLGKTIQTI+LI +L+E K
Sbjct: 405 VTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKR 464
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITH 163
GP +++ P + L NW EF WAPSI +VY G P RKA+ + F VL+T
Sbjct: 465 QNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQV--RHSNFQVLLTT 522
Query: 164 YDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQR-RLLLTGTPIQNSLQ 222
Y+ I++DR L +++WIYMI+DEGHR+KN + L T++ Y R RL+LTGTP+QN+L
Sbjct: 523 YEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLP 582
Query: 223 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFIL 279
ELW+LLNF+LP IFNS+++F+EWFN PF + G ++ LT+EE LL+IRRLH V+RPF+L
Sbjct: 583 ELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLL 642
Query: 280 RRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGL-DTGTGKS--KSLQNLSM 336
RR K +VE LP K + +++C MS Q+ Y Q+ G + + D GK+ K LQN M
Sbjct: 643 RRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVM 702
Query: 337 QLRKCCNHPYLFVG----------EYNM-WRKEEIIRASGKFELLDRLLPKLRKSGHRVL 385
QL+K CNHP++F Y+M WR SGKFELLDR+LPKL +SGHR+L
Sbjct: 703 QLKKICNHPFVFEDVERSIDPTGFNYDMLWR------VSGKFELLDRILPKLFRSGHRIL 756
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+F QMT++M+I+E YL +++LRLDGSTK ++R LL FN P + +FLLSTRAGG
Sbjct: 757 MFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGG 816
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LGLNLQTADTVIIFDSDWNP D QA+DRAHRIGQ KEVR++ L++ S+EE IL RA+
Sbjct: 817 LGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQY 876
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE---REINRLAARSDE 562
K+ ID KVIQAG F+ ST ++R L+ ++ D E E+N + AR D+
Sbjct: 877 KLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDELNEILARGDD 936
Query: 563 EFWLFEKMDEERRQKENY-----RSRLMEDHEVPEWAYSAPDNKEEQKGFEKGFGHESSS 617
E LF++M E+ ++ Y + RL++ E+PE+ K E+ G
Sbjct: 937 ELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPLGR---- 992
Query: 618 ITGKRKRKEVVYADTLSDLQWMKAVENGQDISKLSTRGKRREYLPSEGNESASNSTGAEK 677
G R+R VVY + + D QWM ++ + SE A + G K
Sbjct: 993 --GARRRTPVVYDEAVRDAQWMAEMD-----------------MESE----ARPTRGRPK 1029
Query: 678 KNLDMKNEIFPLASEGTSEDTFGSAPKRLRFERRN 712
+N+ +E L G + G AP L E R+
Sbjct: 1030 RNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRS 1064
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 589 bits (1518), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/567 (51%), Positives = 397/567 (70%), Gaps = 21/567 (3%)
Query: 46 EQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVT 105
EQP + GG L+ YQL+GL+WMLSL+NNNLNGILADEMGLGKTIQTIA I YL+E K
Sbjct: 859 EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQ 918
Query: 106 GPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYD 165
GP +I+ P + L NWI EF WAPS+ + Y G P RK ++ + S FNVL+T ++
Sbjct: 919 GPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS--SNFNVLLTTFE 976
Query: 166 LIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGY-QIQRRLLLTGTPIQNSLQEL 224
I++DR L +++W++MI+DEGHR+KN + L T+S Y Q RL+LTGTP+QN+L EL
Sbjct: 977 YIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPEL 1036
Query: 225 WSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIRPFILRR 281
W+LLNF+LP IFNS+++F+EWFN PF + G ++ L +EE LLII+RLH V+RPF+ RR
Sbjct: 1037 WALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRR 1096
Query: 282 KKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLR 339
K +VEK LP K + ++KC +S Q YQQ+ G + +D GK+ K LQN MQL+
Sbjct: 1097 LKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKGLQNTVMQLK 1156
Query: 340 KCCNHPYLF-----VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLM 394
K CNHP++F + + + + RA+GKFELLDR+LPKL +GH+ L+F QMT++M
Sbjct: 1157 KICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIM 1216
Query: 395 DILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTAD 454
I+E YL+ ++K+LRLDGSTK+++R +LL QFN P S ++F+LSTRAGGLGLNLQTAD
Sbjct: 1217 TIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTAD 1276
Query: 455 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 514
TVIIFD+DWNP D QA+DRAHRIGQ KEVR+ L++ SIEE IL RA+ K+ +D KVI
Sbjct: 1277 TVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVI 1336
Query: 515 QAGLFNTTSTAQDRREMLKEIMRR---GTSSLGTDVPSEREINRLAARSDEEFWLFEKMD 571
QAG F+ ST ++R L+ ++ L + E+N L +R+DEE LF+K+D
Sbjct: 1337 QAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLD 1396
Query: 572 EERRQKENY-----RSRLMEDHEVPEW 593
+ER + Y RL+ +E+P++
Sbjct: 1397 KERAATDIYGKGKPLERLLTVNELPDF 1423
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/632 (50%), Positives = 431/632 (68%), Gaps = 38/632 (6%)
Query: 40 ILPQVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLL 99
I ++ +QP++L GG L+ YQL GL+WM+SL+NN+LNGILADEMGLGKTIQ+I+LI YL
Sbjct: 454 IKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLY 513
Query: 100 ENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNV 159
E K GP +++ P + + NW EF WAPS+ ++Y G P++R +++ + G F+V
Sbjct: 514 EVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQI--RVGNFDV 571
Query: 160 LITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGY-QIQRRLLLTGTPIQ 218
L+T Y+ I++D+ L K W +MI+DEGHR+KN + L+ TIS Y + + RL+LTGTP+Q
Sbjct: 572 LLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQ 631
Query: 219 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRG---QVALTDEEQLLIIRRLHHVIR 275
N+L ELW+LLNF+LP IFNS + FE+WFN PF + G ++ LT+EE LLIIRRLH V+R
Sbjct: 632 NNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLR 691
Query: 276 PFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-----GKSKS 330
PF+LRR K EVEK LP K + ++KC +S Q+ YQQ+ + + GT G K
Sbjct: 692 PFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKG 751
Query: 331 LQNLSMQLRKCCNHPYLF---VGEYNMWR--KEEIIRASGKFELLDRLLPKLRKSGHRVL 385
L N MQLRK CNHP++F G N R + + R +GKFELLDR+LPK + SGHRVL
Sbjct: 752 LNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVL 811
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+F QMT++MDI+E +L++ D K++RLDGSTKTEER +L FNAPDS YF FLLSTRAGG
Sbjct: 812 MFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGG 871
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LGLNLQTADTVIIFD+DWNP D QA+DRAHRIGQK EVR+ L++ S+EEVILERA Q
Sbjct: 872 LGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQ 931
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTS--SLGTDVPSEREINRLAARSDEE 563
K+ ID KVIQAG F+ STA+++ L+ ++ T+ + E+N ARS +E
Sbjct: 932 KLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADE 991
Query: 564 FWLFEKMDEERRQKENYRS----------RLMEDHEVPEWAYSAPDNKEEQKGFEKGFGH 613
LF+K+D+ER +E + RL++ E+P K ++ E+ F
Sbjct: 992 KILFDKIDKERMNQERADAKAQGLRVPPPRLIQLDELP---------KVFREDIEEHFKK 1042
Query: 614 ESSSITGK-RKRKEVVYADTLSDLQWMKAVEN 644
E S G+ R++K V Y D L++ Q+++AVE+
Sbjct: 1043 EDSEPLGRIRQKKRVYYDDGLTEEQFLEAVED 1074
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/608 (45%), Positives = 376/608 (61%), Gaps = 67/608 (11%)
Query: 44 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
V QP++LQ G LR YQL GLQWMLSL+NN LNGILADEMGLGKT+Q +ALIAYL+E KG
Sbjct: 969 VVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKG 1028
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSER---GRFNVL 160
GPH+I+ P AVL NW +E TW PS++ + Y G D+R + FS+ +FNVL
Sbjct: 1029 NYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRS----KLFSQEVCAMKFNVL 1084
Query: 161 ITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNS 220
+T Y+ IM DR L KV W Y+I+DE R+K+ E LA+ + Y+ QRRLLLTGTP+QN
Sbjct: 1085 VTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQND 1144
Query: 221 LQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVA------LTDEEQLLIIRRLHHVI 274
L+ELWSLLN LLP +F++ + F +WF PF+ G L E+++++I RLH ++
Sbjct: 1145 LKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQIL 1204
Query: 275 RPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGK------- 327
PF+LRR+ ++VE LP K V+L+C MSA Q Y + G + +D K
Sbjct: 1205 EPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNP 1264
Query: 328 ------SKSLQNLSMQLRKCCNHPYLFVGEYNMWRKEEIIRASGKFELLDRLLPKLRKSG 381
++L N M+LRK CNHP L +N + K+ ++R+ GK +LDR+L KL+++G
Sbjct: 1265 IYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTG 1324
Query: 382 HRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLST 441
HRVLLFS MT+L+DILE YL+ + R+DG+T E+R + + FN PD+ F+FLLS
Sbjct: 1325 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSI 1384
Query: 442 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV--------- 492
RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +EV+V + +V
Sbjct: 1385 RAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQK 1444
Query: 493 -----------------------GSIEEVILERAKQ-KMGIDAKVIQAGLFNTTSTAQDR 528
GSIE +I +Q K+ + +VI AG F+ +T ++R
Sbjct: 1445 EDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEER 1504
Query: 529 REMLKEIMRRGTSSLGT--DVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLME 586
R L+ ++ T DVPS E+NR+ ARS+EE LF++MDEE E M
Sbjct: 1505 RMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTEE-----MT 1559
Query: 587 DHE-VPEW 593
+HE VP+W
Sbjct: 1560 NHEQVPKW 1567
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/515 (47%), Positives = 339/515 (65%), Gaps = 26/515 (5%)
Query: 48 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 107
P ++ GE+R YQ+ GL WM+SL+ N +NGILADEMGLGKT+QTI+L+ YL K GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 108 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLI 167
H+++ PK+ L NW+NEF W PS+ AV G D R + G ++V +T Y++
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMP-GEWDVCVTSYEMC 238
Query: 168 MRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSL 227
+R++ KK W Y+++DE HR+KN + L++ + ++ RLL+TGTP+QN+L ELW+L
Sbjct: 239 IREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWAL 298
Query: 228 LNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVE 287
LNFLLP +FNS E+F+EWFN L D+ +I RLH V++PF+LRR K EVE
Sbjct: 299 LNFLLPDVFNSSEDFDEWFNT------NTCLGDD---ALITRLHAVLKPFLLRRLKAEVE 349
Query: 288 KYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNHP 345
K L K ++ + +S Q+ +Y +V + + + G GK + LQN+ MQLRKC NHP
Sbjct: 350 KRLKPKKEMKIFVGLSKMQRDWYTKVL-LKDIDVVNGAGKVEKMRLQNILMQLRKCTNHP 408
Query: 346 YLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIY 400
YLF G Y ++ SGK +LD+LLPKL++ G RVL+FSQMTR++DILE Y
Sbjct: 409 YLFDGAEPGPPYTT--DTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDY 466
Query: 401 LKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFD 460
++ + RLDG T E+R +++FN +S F+F+LSTRAGGLG+NL TAD VII+D
Sbjct: 467 CHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYD 526
Query: 461 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-LF 519
SDWNPQMD QA DRAHRIGQKK+VRVF L++ ++EE I+ERA+ K+ +D VIQ G L
Sbjct: 527 SDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLV 586
Query: 520 NTTSTAQDRREMLKEIMRRGT----SSLGTDVPSE 550
+ S ++ EML I+R G SS TD+ E
Sbjct: 587 DNRSNQLNKDEMLN-IIRFGANQVFSSKETDITDE 620
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/525 (47%), Positives = 361/525 (68%), Gaps = 26/525 (4%)
Query: 47 QPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTG 106
QP+ +QG ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+AYL E +G+ G
Sbjct: 181 QPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 239
Query: 107 PHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDL 166
PH++VAPK+ L NW+NE + P + AV + G P+ER+ +RE+ G+F++ +T +++
Sbjct: 240 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVA-GKFDICVTSFEM 298
Query: 167 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
++++ L++ W Y+I+DE HR+KN L+KT+ + RLL+TGTP+QN+L ELW+
Sbjct: 299 AIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWA 358
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 286
LLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR K +V
Sbjct: 359 LLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRLKSDV 409
Query: 287 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPY 346
EK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCCNHPY
Sbjct: 410 EKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG-GERKRLLNIAMQLRKCCNHPY 468
Query: 347 LFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYL 401
LF G Y + +I +GK LLD+LLPKL++ RVL+FSQMTRL+DILE YL
Sbjct: 469 LFQGAEPGPPYTTG--DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYL 526
Query: 402 KLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDS 461
+ + R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI++DS
Sbjct: 527 MYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDS 586
Query: 462 DWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNT 521
DWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 587 DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAE 646
Query: 522 TSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 562
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 647 QKTVN--KDELLQMVRYGAEMVFSSKDSTITDE-DIDRIIAKGEE 688
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/525 (48%), Positives = 358/525 (68%), Gaps = 26/525 (4%)
Query: 47 QPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTG 106
QP+ ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+ YL E +G+TG
Sbjct: 223 QPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITG 281
Query: 107 PHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDL 166
PH++VAPK+ L NWI E + P + AV + G P+ER +RE + G+F+V +T +++
Sbjct: 282 PHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLL-QPGKFDVCVTSFEM 340
Query: 167 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
++++ LK+ W Y+I+DE HR+KN L+KT+ Y RLL+TGTP+QN+L ELWS
Sbjct: 341 AIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWS 400
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 286
LLNFLLP IF+S E F+EWF Q++ +++Q ++++LH V+RPF+LRR K +V
Sbjct: 401 LLNFLLPEIFSSAETFDEWF--------QISGENDQQE-VVQQLHKVLRPFLLRRLKSDV 451
Query: 287 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPY 346
EK LP K + ILK MS QK YY+ + ++ G G+ K L N++MQLRKCCNHPY
Sbjct: 452 EKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG-GERKRLLNIAMQLRKCCNHPY 510
Query: 347 LFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYL 401
LF G Y E ++ +GK LLD+LLPKL+ RVL+FSQMTRL+DILE YL
Sbjct: 511 LFQGAEPGPPYTTG--EHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYL 568
Query: 402 KLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDS 461
+++ R+DG+T E+R ++ FN P S F+FLLSTRAGGLG+NL TAD V+++DS
Sbjct: 569 MYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDS 628
Query: 462 DWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNT 521
DWNPQ D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 629 DWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAE 688
Query: 522 TSTAQDRREMLKEIMRRGT----SSLGTDVPSEREINRLAARSDE 562
T ++ L +++R G SS + + E +I+R+ A+ +E
Sbjct: 689 QKTVN--KDDLLQMVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 730
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/505 (46%), Positives = 343/505 (67%), Gaps = 24/505 (4%)
Query: 48 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 107
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 108 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 166
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMP--GEWDVCVTSYEM 296
Query: 167 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 297 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 356
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 286
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 357 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 407
Query: 287 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 344
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 408 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 466
Query: 345 PYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 399
PYLF G Y E I+ SGK LD+LL ++++ G RVL+FSQMTRL+DILE
Sbjct: 467 PYLFDGAEPGPPYTT--DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILED 524
Query: 400 YLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 459
Y +++ RLDG T EER + FNAP+S F+F+LSTRAGGLG+NL +AD VI++
Sbjct: 525 YCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILY 584
Query: 460 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG-L 518
DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+ +D+ VIQ G L
Sbjct: 585 DSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRL 644
Query: 519 FNTTSTAQDRREMLKEIMRRGTSSL 543
+ S + EML +++R G + +
Sbjct: 645 IDQQSNKLAKEEML-QMIRHGATHV 668
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/524 (45%), Positives = 347/524 (66%), Gaps = 36/524 (6%)
Query: 48 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 107
P+ ++GG LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTIAL+ YL + + GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 108 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKA-MREEFFSERGRFNVLITHYDL 166
H+++ PK+ L NW+NEF W PS+ + + G D R A +R+E G ++V +T Y++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP--GEWDVCVTSYEM 292
Query: 167 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
+++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN+L ELW+
Sbjct: 293 VIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 352
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 286
LLNFLLP +FNS ++F+ WF+ + L D++ ++ RLH V++PF+LRR K +V
Sbjct: 353 LLNFLLPDVFNSADDFDSWFDT------KNCLGDQK---LVERLHAVLKPFLLRRIKTDV 403
Query: 287 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQLRKCCNH 344
EK LP K ++ + +S Q+ +Y ++ + + + +GK ++ N+ MQLRKCCNH
Sbjct: 404 EKSLPPKKEIKIYLGLSKMQREWYTKIL-MKDIDVLNSSGKMDKMRLLNILMQLRKCCNH 462
Query: 345 PYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEI 399
PYLF G Y E I+ SGK +LD+LL KL++ G RVL+FSQMTRL+DILE
Sbjct: 463 PYLFDGAEPGPPYTT--DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILED 520
Query: 400 YLKLNDFKFLRLDGSTKTEERGT------------LLKQFNAPDSPYFMFLLSTRAGGLG 447
Y +++ RLDG T EER ++ FNAP+S F+F+LSTRAGGLG
Sbjct: 521 YCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLG 580
Query: 448 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 507
+NL +AD VI++DSDWNPQ+D QA DRAHRIGQKK VRVF L++ ++EE I+ERA+ K+
Sbjct: 581 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 640
Query: 508 GIDAKVIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 550
+D+ VIQ G L + S + EML +++R G + + SE
Sbjct: 641 RLDSIVIQQGRLIDQQSNKLAKEEML-QMIRHGATHVFASKESE 683
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/508 (46%), Positives = 340/508 (66%), Gaps = 19/508 (3%)
Query: 44 VTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
V+E P+ ++ G+LR YQ++GL W++SL N L+GILADEMGLGKT+QTI+ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITH 163
+ GP +I+ PK+ L NW EF W P++ +V G D R + E RF+VLIT
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILE-ARFDVLITS 290
Query: 164 YDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQE 223
Y++++R++ LK++ W Y+++DE HR+KN + AL++ I + + RLL+TGTP+QN+L E
Sbjct: 291 YEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHE 350
Query: 224 LWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKK 283
LW+LLNFLLP IF E F+EWF + ++++Q ++I++LH V+ PF+LRR K
Sbjct: 351 LWALLNFLLPDIFGDSELFDEWF--------EQNNSEQDQEIVIQQLHSVLNPFLLRRVK 402
Query: 284 DEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLSMQLRK 340
+VEK L K + + M+ Q +Y+ + D+ V G + K+ L N+ MQLRK
Sbjct: 403 ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 462
Query: 341 CCNHPYLFVGE-----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 395
CCNHPYLF G Y E +I SGK +LD+LL +L++ G RVL+FSQM+RL+D
Sbjct: 463 CCNHPYLFEGAEPGPPYTT--DEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLD 520
Query: 396 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 455
ILE Y DF++ R+DGST EER + ++N P+S F+FLL+TRAGGLG+NL TADT
Sbjct: 521 ILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADT 580
Query: 456 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 515
VI+FDSDWNPQ D QA DRAHRIGQKK+V V+ V+ +IEE ++ERA QK+ +D VIQ
Sbjct: 581 VILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640
Query: 516 AGLFNTTSTAQDRREMLKEIMRRGTSSL 543
G T++ + ++ L ++++ G ++
Sbjct: 641 QGTGKKTASLGNSKDDLLDMIQFGAKNM 668
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/519 (43%), Positives = 342/519 (65%), Gaps = 22/519 (4%)
Query: 40 ILPQVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLL 99
+ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+
Sbjct: 164 VCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMK 223
Query: 100 ENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNV 159
+ + GPH+++ PK+ L NW++EF W P++ +V G ++R A + G ++V
Sbjct: 224 HYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLP-GEWDV 282
Query: 160 LITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQN 219
+T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN
Sbjct: 283 CVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQN 342
Query: 220 SLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFIL 279
+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V+RPF+L
Sbjct: 343 NLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMVLRPFLL 393
Query: 280 RRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQ 337
RR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++ N+ MQ
Sbjct: 394 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRLLNILMQ 452
Query: 338 LRKCCNHPYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTR 392
LRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+FSQMTR
Sbjct: 453 LRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTR 510
Query: 393 LMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQT 452
++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGLG+NL T
Sbjct: 511 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 570
Query: 453 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAK 512
AD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K+ +D+
Sbjct: 571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 630
Query: 513 VIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 550
VIQ G L + + EML +++R G + + SE
Sbjct: 631 VIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 668
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/519 (43%), Positives = 342/519 (65%), Gaps = 22/519 (4%)
Query: 40 ILPQVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLL 99
+ + + P+ ++ G+LR YQ+ GL W++SL+ N +NGILADEMGLGKT+QTI+L+ Y+
Sbjct: 163 VCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMK 222
Query: 100 ENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNV 159
+ + GPH+++ PK+ L NW++EF W P++ +V G ++R A + G ++V
Sbjct: 223 HYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLP-GEWDV 281
Query: 160 LITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQN 219
+T Y+++++++ KK W Y+++DE HR+KN + L++ + ++ RLLLTGTP+QN
Sbjct: 282 CVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQN 341
Query: 220 SLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFIL 279
+L ELWSLLNFLLP +FNS ++F+ WF+ L D++ ++ RLH V+RPF+L
Sbjct: 342 NLHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGDQK---LVERLHMVLRPFLL 392
Query: 280 RRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQ--NLSMQ 337
RR K +VEK LP K +V + +S Q+ +Y ++ + + + GK ++ N+ MQ
Sbjct: 393 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-MKDIDILNSAGKMDKMRLLNILMQ 451
Query: 338 LRKCCNHPYLFVG-----EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTR 392
LRKCCNHPYLF G Y ++ SGK +LD+LLPKL++ G RVL+FSQMTR
Sbjct: 452 LRKCCNHPYLFDGAEPGPPYTT--DMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTR 509
Query: 393 LMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQT 452
++DILE Y ++++ RLDG T +ER + +N P+S F+F+LSTRAGGLG+NL T
Sbjct: 510 VLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 569
Query: 453 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAK 512
AD VI++DSDWNPQ+D QA DRAHRIGQ K VRVF ++ ++EE I+ERA+ K+ +D+
Sbjct: 570 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSI 629
Query: 513 VIQAG-LFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSE 550
VIQ G L + + EML +++R G + + SE
Sbjct: 630 VIQQGRLVDQNLNKIGKDEML-QMIRHGATHVFASKESE 667
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/502 (44%), Positives = 328/502 (65%), Gaps = 19/502 (3%)
Query: 48 PTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGP 107
P ++ GE+R YQ+ GL W+ SL +N +NGILADEMGLGKT+QTI++I Y+ K P
Sbjct: 124 PFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASP 183
Query: 108 HVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDER-KAMREEFFSERGRFNVLITHYDL 166
H+++ PK+ L NW NEF W PSI AVV G R + +R+ ++ F+V T Y++
Sbjct: 184 HLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQK--FDVCCTTYEM 241
Query: 167 IMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
+++ + LKK+ W Y+I+DE HR+KN + L++T+ + RLL+TGTP+QN+L ELW+
Sbjct: 242 MLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWA 301
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEV 286
LLNFLLP IF S ++F+ WF+ + TD +++RLH V++PF+LRR K +V
Sbjct: 302 LLNFLLPDIFTSSDDFDSWFS----NDAMSGNTD-----LVQRLHKVLQPFLLRRIKSDV 352
Query: 287 EKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKS--LQNLSMQLRKCCNH 344
EK L K +V + +S Q+ +Y +V + + + G GK + L N+ M LRKC NH
Sbjct: 353 EKSLLPKKEVKVYVGLSKMQREWYTKVL-MKDIDIINGAGKVEKARLMNILMHLRKCVNH 411
Query: 345 PYLFVGEYN---MWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYL 401
PYLF G + ++ SGK +LD+LL K ++ G RVL+FSQ +R++D+LE +
Sbjct: 412 PYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFC 471
Query: 402 KLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDS 461
+++ RLDGST E+R ++ +NAPDS F+F+L+TRAGGLG+NL TAD VII+DS
Sbjct: 472 WWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDS 531
Query: 462 DWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNT 521
DWNPQ D QA DRAHRIGQKK+VRVF L++ +++E I+E+A+ K+ +D VIQ G +
Sbjct: 532 DWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSE 591
Query: 522 TSTAQDRREMLKEIMRRGTSSL 543
+ +M+ ++R G +
Sbjct: 592 AQKTLGKGDMI-SMIRHGAEQV 612
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/575 (41%), Positives = 349/575 (60%), Gaps = 51/575 (8%)
Query: 21 LLSFSSAIVLEWQNLTRSFILPQVTE--------------QPTLLQGGELRAYQLEGLQW 66
++ + V +QN S ILPQ + QP ++GGELR +QL G+ W
Sbjct: 327 IVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELRDFQLTGINW 386
Query: 67 MLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKAVLPNWINEFST 126
M L++ NGILADEMGLGKT+QT+A I++L+ + GPH+IV P + +P W++ F
Sbjct: 387 MAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEK 446
Query: 127 WAPSIAAVVYDGRPDERKAMRE-EFFSE---RGR----FNVLITHYDLIMRDRQYLKKVQ 178
WAP + + Y G R +RE EF++ +G+ FNVL+T Y+ I++DR L ++
Sbjct: 447 WAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIK 506
Query: 179 WIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNS 238
W +M VDE HRLKN E +L ++++ +++ R+L+TGTP+QN+++EL +L+NFL+P F
Sbjct: 507 WQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTI 566
Query: 239 VENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVIL 298
+ + F+++ DEEQ I LH I+PFILRR K +VEK LP K++ IL
Sbjct: 567 DQEID------FENQ------DEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERIL 614
Query: 299 KCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLSMQLRKCCNHPYLF--------- 348
+ ++S Q YY+ + L G G SL N+ +L+K NHPYLF
Sbjct: 615 RVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQ 674
Query: 349 -VGEYNMWRKE---EIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLN 404
G+ M R+ +I +SGK LLD+LL +L+K GHRVL+FSQM R++DIL YL +
Sbjct: 675 KFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK 734
Query: 405 DFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWN 464
F RLDG+ + +R + FN+PDS F+FLLSTRAGGLG+NL TADTV+IFDSDWN
Sbjct: 735 GINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWN 794
Query: 465 PQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFN---T 521
PQ D QA RAHRIGQK V V+ LVS ++EE +LERA++KM ++ +I G+ +
Sbjct: 795 PQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKY 854
Query: 522 TSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRL 556
T + L I++ G ++ T +++++ L
Sbjct: 855 TKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDL 889
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/512 (44%), Positives = 343/512 (66%), Gaps = 24/512 (4%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
Q E P + G+LR YQ++G+ W++SL N + GILADEMGLGKT+QTI+ + YL +
Sbjct: 184 QFRESPAYV-NGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIE 242
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLIT 162
+ GP +++APK+ L NW+ E + W P + A + G +ER + ++ F+V+I
Sbjct: 243 KIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLL-GCDFDVVIA 301
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 222
Y++I+R++ LKK+ W Y+I+DE HR+KN E L++ + + + RLL+TGTP+QN+L
Sbjct: 302 SYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLH 361
Query: 223 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 282
ELW+LLNFLLP IF+ ++F++WF++ T+E+Q I+++LH V++PF+LRR
Sbjct: 362 ELWALLNFLLPDIFSDAQDFDDWFSS--------ESTEEDQDKIVKQLHTVLQPFLLRRI 413
Query: 283 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDTGTGKSKS-LQNLSMQLR 339
K +VE L K ++ L MS+ QK +Y+++ D+ V G+ +SK+ L N+ MQLR
Sbjct: 414 KSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLR 473
Query: 340 KCCNHPYLFVGEYN---MWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDI 396
KCCNHPYLF G E ++ + K ++LD+LL KL++ G RVL+FSQM+RL+DI
Sbjct: 474 KCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDI 533
Query: 397 LEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTV 456
LE Y ++++ R+DGST E+R + +NAPDS F+FLL+TRAGGLG+NL +AD V
Sbjct: 534 LEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVV 593
Query: 457 IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 516
+++DSDWNPQ D QA DRAHRIGQKK+V+VF LV+ S+EE ILERA QK+ +D VIQ
Sbjct: 594 VLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQ 653
Query: 517 GLFNTTSTAQ-----DRREMLKEIMRRGTSSL 543
N TS + D ++ L +++ G + +
Sbjct: 654 ---NRTSLKKKENKADSKDALLSMIQHGAADV 682
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/485 (48%), Positives = 310/485 (63%), Gaps = 26/485 (5%)
Query: 44 VTEQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 101
+ +QP L G ELR YQLEGL W+ + N + ILADEMGLGKTIQTI+ ++YL
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 102 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGRF 157
+ GP +IV P + L +W EF WAP I VVY G R +RE + ++R +F
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKF 589
Query: 158 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 217
N LIT Y+++++D+ L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP+
Sbjct: 590 NALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 649
Query: 218 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 277
QNSL+ELWSLL+F++P F E+FEE D G+ + LH V+ PF
Sbjct: 650 QNSLKELWSLLHFIMPEKFEFWEDFEE-------DHGKGRENG------YQSLHKVLEPF 696
Query: 278 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLSM 336
+LRR K +VEK LP K + IL+ +MSA QK YY+ + L GT G + N+ M
Sbjct: 697 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVM 756
Query: 337 QLRKCCNHPYLFVGEYNMWRKE------EIIRASGKFELLDRLLPKLRKSGHRVLLFSQM 390
+L+KCCNH YL R+ +IR+SGK LLD+LL +LR+ G+RVL+FSQM
Sbjct: 757 ELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQM 816
Query: 391 TRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNL 450
R++DIL YL + + F RLDGS K E R L FNA S F FLLSTRAGGLG+NL
Sbjct: 817 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 876
Query: 451 QTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGID 510
+ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ G++EE I+ERAK+KM +D
Sbjct: 877 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 936
Query: 511 AKVIQ 515
VIQ
Sbjct: 937 HLVIQ 941
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/521 (43%), Positives = 331/521 (63%), Gaps = 32/521 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
++ +QP+ ++GGE+R +QL G+ WM L++ N NGILADEMGLGKT+QT+ ++YL+ +
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF----SERGRF 157
GP +IV P + +P W + W P + ++ Y G + R +RE EF+ S + +F
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 158 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 217
N+L+T Y+ I++D+Q L ++W Y+ +DE HRLKN E +L +T+S ++ RLL+TGTP+
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPL 556
Query: 218 QNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPF 277
QN+L+EL SL+NFL+P F + F+ P + EQ IR L ++PF
Sbjct: 557 QNNLKELASLVNFLMPGKFYIRDELN--FDQP----------NAEQERDIRDLQERLQPF 604
Query: 278 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSK-SLQNLS 335
ILRR K +VEK LP KS+ IL+ ++S Q +Y+ + L T G+ + SL N+
Sbjct: 605 ILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIV 664
Query: 336 MQLRKCCNHPYLFVGEYNMW------RKEEIIRA----SGKFELLDRLLPKLRKSGHRVL 385
++L+K NHPYLF G W +E+ +R SGK LLD+LL +L+ GHRVL
Sbjct: 665 VELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVL 724
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+FSQM R+++IL Y+ L + + RLDG+ R + FNAPDSP F+FLLSTRAGG
Sbjct: 725 IFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGG 784
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ +S ++EE ILERA++
Sbjct: 785 LGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARR 844
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 543
KM ++ +I G+ + +++ + + L I++ G S++
Sbjct: 845 KMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNM 885
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/522 (43%), Positives = 332/522 (63%), Gaps = 33/522 (6%)
Query: 43 QVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENK 102
++ +QP+ + GGELR +QL G+ WM L++ N NGILADEMGLGKT+QT+A ++YL +
Sbjct: 362 KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL 421
Query: 103 GVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFF---SERGRFN 158
GP ++V P + +P W + WA + + Y G R+ +R+ EF+ +++ +FN
Sbjct: 422 RQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFN 481
Query: 159 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 218
+L+T Y+ +++DR L ++W YM +DE HRLKN E +L + +S ++ RLL+TGTP+Q
Sbjct: 482 LLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQ 541
Query: 219 NSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFI 278
N+++EL +L++FL+P F E AP DEEQ IR L ++P+I
Sbjct: 542 NNIRELAALVDFLMPGKFEIREEIN--LEAP----------DEEQEAYIRSLQEHLQPYI 589
Query: 279 LRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQV-TDVGRV-GLDTGTGKSKSLQNLSM 336
LRR K +VEK LP KS+ IL+ ++S Q +Y+ + T RV +G SL N+ +
Sbjct: 590 LRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVV 649
Query: 337 QLRKCCNHPYLFVGEYNMW--------RKEEIIRA----SGKFELLDRLLPKLRKSGHRV 384
+L+K NHPYLF G W R++E+++ SGK LLD+LL +LR+ GHRV
Sbjct: 650 ELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRV 709
Query: 385 LLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAG 444
L+FSQM R++DIL YL L + RLDG+ R T + FNAP+SP F+FLLSTRAG
Sbjct: 710 LIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAG 769
Query: 445 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAK 504
GLG+NL TADTVIIFDSDWNPQ D QA RAHRIGQK V V+ L+S +IEE +LERA+
Sbjct: 770 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERAR 829
Query: 505 QKMGIDAKVIQAGLFNTTSTAQDRR---EMLKEIMRRGTSSL 543
+KM ++ +I G+ + +++ + E L I++ G S++
Sbjct: 830 RKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNM 871
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/533 (43%), Positives = 341/533 (63%), Gaps = 23/533 (4%)
Query: 50 LLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHV 109
LL GG+L++YQL+G++W++SL+ N LNGILAD+MGLGKTIQTI +++L N G+ GP++
Sbjct: 196 LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGN-GLDGPYL 254
Query: 110 IVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSER--GRFNVLITHYDLI 167
++AP + L NW NE + + PSI A++Y G ++R +R + + +F ++IT Y++
Sbjct: 255 VIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVA 314
Query: 168 MRD-RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWS 226
M D ++ L+ W Y+++DEGHRLKNH+C L + + ++ +LLLTGTP+QN+L ELWS
Sbjct: 315 MNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWS 374
Query: 227 LLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQ--LLIIRRLHHVIRPFILRRKKD 284
LLNF+LP IF S + FE WF+ K++ + +EE+ ++ +LH ++RPFILRR K
Sbjct: 375 LLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKC 434
Query: 285 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTD---VGRVGLDT--GTGKSKSLQNLSMQLR 339
+VE LP K ++I+ M+ QK + + + + +G + G G L NL +QLR
Sbjct: 435 DVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLR 494
Query: 340 KCCNHPYLFVGE----YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMD 395
K CNHP L G+ Y EEI+ GKF LL+RLL +L + H+VL+FSQ T+L+D
Sbjct: 495 KNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLD 554
Query: 396 ILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADT 455
I++ Y F+ R+DGS K +ER +K F+ S +FLLSTRAGGLG+NL ADT
Sbjct: 555 IMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADT 614
Query: 456 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 515
I++DSDWNPQMD QA DR HRIGQ K V V+ L + SIE +L+RA K+ ++ VI
Sbjct: 615 CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIG 674
Query: 516 AGLFN-------TTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRLAARSD 561
G F+ T +D +LKE + TD+ S+ +++RL RSD
Sbjct: 675 QGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI-SDADLDRLLDRSD 726
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/603 (38%), Positives = 340/603 (56%), Gaps = 89/603 (14%)
Query: 42 PQVTEQPTLLQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 101
P +QP GG +R YQ+EG++W+ L+ N +NGILADEMGLGKT+Q IA IA +++
Sbjct: 209 PVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ- 267
Query: 102 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFN--- 158
+GV GP ++ P + LPNW+ EF + P I ++Y G +ER+ + + +G
Sbjct: 268 RGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHP 327
Query: 159 VLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQ 218
V+IT +++ MRDR L+ W Y+IVDEGHR+KN +C L + + + +LLLTGTP+Q
Sbjct: 328 VVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 387
Query: 219 NSLQELWSLLNFLLPTIFNSVENFEEWFN-APFKDRGQVALTDEEQLLIIRRLHHVIRPF 277
N+L ELWSLLNFLLP +F+ +++FE WF+ + + + E + ++ LH ++ PF
Sbjct: 388 NNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPF 447
Query: 278 ILRRKKDEVEKYLPGKSQVILKCDMSAWQKVY---------------------------- 309
+LRR K +V +P K +V++ +S Q+++
Sbjct: 448 LLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGR 507
Query: 310 ----------YQQVTD---------------------VGRVGLDTGTGKSKSLQNLSMQL 338
Y ++ D V V + + + LQN+ M L
Sbjct: 508 PKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLL 567
Query: 339 RKCCNHPYLF-------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMT 391
RKCCNHPYL E+ + EE++ SGKF +LDR+LP+L+K GH+VLLFSQMT
Sbjct: 568 RKCCNHPYLIEYPIDPVTQEFKI--DEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMT 625
Query: 392 RLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQ 451
++DIL Y L DF F RLDGS ER + FN D F+FL+STRAGGLG+NL
Sbjct: 626 SMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLT 684
Query: 452 TADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDA 511
ADTVII+DSDWNPQ D QA+DR HRIGQ K V V+ LV+ +I++ I+ERA K ++
Sbjct: 685 AADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEK 744
Query: 512 KVI--------QAGLFNTTSTAQDRREMLKEIMR-----RGTSSLGTDVPSEREINRLAA 558
+I Q+GL N + D +E++ E+++ R V S++++ L
Sbjct: 745 LIIHKNHFKGGQSGL-NLSKNFLDPKELM-ELLKSRDYEREIKGSREKVISDKDLELLLD 802
Query: 559 RSD 561
RSD
Sbjct: 803 RSD 805
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/524 (45%), Positives = 328/524 (62%), Gaps = 37/524 (7%)
Query: 44 VTEQPTLLQGGE---LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 100
+ +QP+ + G E LR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 462 LKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 521
Query: 101 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 156
+ GP ++V P + L +W E TWAP + AVVY G R +R + ++R +
Sbjct: 522 EHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLK 581
Query: 157 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 216
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 582 FNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 641
Query: 217 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 276
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 642 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 688
Query: 277 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 335
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 689 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 748
Query: 336 MQLRKCCNHPYLF--VGEYNMWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 389
M+L+KCCNH YL + + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 749 MELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 808
Query: 390 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 449
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 809 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 868
Query: 450 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 509
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 869 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 928
Query: 510 DAKVIQ------AGLFNTTSTAQD----RREMLKEIMRRGTSSL 543
D VIQ + +T ST +E L I++ G L
Sbjct: 929 DHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEEL 972
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/487 (45%), Positives = 312/487 (64%), Gaps = 28/487 (5%)
Query: 43 QVTEQPTLLQGG-ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEN 101
++ QP L G LR YQ++GL W+L + + ILADEMGLGKTIQTI + L +
Sbjct: 514 RIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 102 KGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE---EF-FSERGRF 157
+ GP + V P + + W EF WAP + V Y G R+ +++ +F S+R +F
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKF 633
Query: 158 NVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPI 217
N ++T Y+++++D+Q+L +QW ++VDE HRLKN + L K++ + RLL+TGTP+
Sbjct: 634 NCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPL 693
Query: 218 QNSLQELWSLLNFLLPTIFNSVENFE-EWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 276
QNSL+ELW+LL+F++P F++ ENFE + NA +D+G RLH + P
Sbjct: 694 QNSLKELWALLHFIMPDKFDTWENFEVQHGNA--EDKGYT------------RLHQQLEP 739
Query: 277 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 335
+ILRR K +VEK LP K + IL+ +M++ QK YY+ + L G G + + N+
Sbjct: 740 YILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIV 799
Query: 336 MQLRKCCNHPYLF-VGEYNMWRKEE------IIRASGKFELLDRLLPKLRKSGHRVLLFS 388
++L+KCCNH L E+ + ++ +++ SGK LLD+LL +L+++GHRVL+FS
Sbjct: 800 IELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFS 859
Query: 389 QMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGL 448
QM R++D+L YL+ F F RLDGS K E R L FNA S F FLLSTRAGGLG+
Sbjct: 860 QMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGI 919
Query: 449 NLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMG 508
NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE I+ERAKQKM
Sbjct: 920 NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMV 979
Query: 509 IDAKVIQ 515
+D VIQ
Sbjct: 980 LDHLVIQ 986
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 44 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 100
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 466 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 525
Query: 101 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----ERGR 156
+ GP ++V P + L +W E TWA + AVVY G + R +R ++ +R +
Sbjct: 526 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLK 585
Query: 157 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 216
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 586 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 645
Query: 217 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 276
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 646 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 692
Query: 277 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 335
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 693 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 752
Query: 336 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 389
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 753 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 812
Query: 390 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 449
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 813 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 872
Query: 450 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 509
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 873 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 932
Query: 510 DAKVIQ 515
D VIQ
Sbjct: 933 DHLVIQ 938
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/486 (47%), Positives = 316/486 (65%), Gaps = 27/486 (5%)
Query: 44 VTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLE 100
+ +QP+ + +G ELR YQL GL W+ + + ILADEMGLGKTIQTI+ + YL
Sbjct: 464 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 523
Query: 101 NKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF----SERGR 156
+ GP ++V P + L +W E TWA + AVVY G + R +R + ++R +
Sbjct: 524 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLK 583
Query: 157 FNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTP 216
FN+L+T Y+++++D+ +L + W ++ VDE HRLKN + L KT+ ++ RLL+TGTP
Sbjct: 584 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 643
Query: 217 IQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRP 276
+QNSL+ELWSLL+F++P F+S E+FEE + ++ G +L H + P
Sbjct: 644 LQNSLKELWSLLHFIMPEKFSSWEDFEE-EHGKGREYGYASL------------HKELEP 690
Query: 277 FILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-GKSKSLQNLS 335
F+LRR K +VEK LP K + IL+ +MSA QK YY+ + L G+ G + N+
Sbjct: 691 FLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIM 750
Query: 336 MQLRKCCNHPYLFVGEYN--MWRKEE----IIRASGKFELLDRLLPKLRKSGHRVLLFSQ 389
M+L+KCCNH YL N + K+E +IR+SGK LLD+LL +LR+ G+RVL+FSQ
Sbjct: 751 MELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 810
Query: 390 MTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLN 449
M R++DIL YLK F F RLDGS K E R L FNA S F FLLSTRAGGLG+N
Sbjct: 811 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 870
Query: 450 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGI 509
L +ADTV+IFDSDWNPQ D QA+ RAHRIGQKK+V ++ LV+ GS+EE ILERAK+KM +
Sbjct: 871 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 930
Query: 510 DAKVIQ 515
D VIQ
Sbjct: 931 DHLVIQ 936
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 319/533 (59%), Gaps = 42/533 (7%)
Query: 40 ILPQVTEQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAY 97
IL + QP + GG L YQLEG+ W+ ++N + ILADEMGLGKT+Q++ +
Sbjct: 598 ILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYT 657
Query: 98 LLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----- 152
L++ GP +I AP + + NW E W P V Y G + R +RE FS
Sbjct: 658 LMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGA 717
Query: 153 -------------ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAK 199
E +F+VL+T Y+ I D+ L + W ++VDE HRLKN++ K
Sbjct: 718 VRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFK 777
Query: 200 TISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALT 259
+ Y IQ R+LLTGTP+QN+L+EL+ LLNFL P FN +E+F F+ ++
Sbjct: 778 NLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---------IS 828
Query: 260 DEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRV 319
E+Q I +LH+++ P +LRR K +V +P K ++I++ ++SA QK YY+ +
Sbjct: 829 KEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFD 885
Query: 320 GLDTGTGKSK-SLQNLSMQLRKCCNHPYLFVG--------EYNMWRKEEIIRASGKFELL 370
L+ G ++ SL N+ M+L+KCCNHPYLF+ + M+ +I+ +GKF LL
Sbjct: 886 ALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLL 945
Query: 371 DRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAP 430
++L KL+ GHRVL+FSQMT ++DILE + + +K+ R+DGS ++R + ++NAP
Sbjct: 946 QKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAP 1005
Query: 431 DSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 490
+ F+FLLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V
Sbjct: 1006 GAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1065
Query: 491 SVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 543
+ GS+EE I AK+KM + V++AGL + + E L +++R GT L
Sbjct: 1066 TKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEEL 1117
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/497 (45%), Positives = 309/497 (62%), Gaps = 29/497 (5%)
Query: 35 LTRSFILPQVTEQPTLL---QGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQT 91
L R Q+ EQP + LR YQ++GL W++ + + + ILADEMGLGKTIQT
Sbjct: 181 LKRRPKFHQIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQT 240
Query: 92 IALIAYLLENKGVTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFF 151
I + YL +++ + GP + V P + + W EF WAP I V Y G R +R+ +
Sbjct: 241 ICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEW 300
Query: 152 S----ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQ 207
S +R +FN ++T Y+++++DRQ+L+ W ++VDE HRLKN + L K + +
Sbjct: 301 SFSSSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTN 360
Query: 208 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLII 267
RLL+TGTP+QNSL+ELW+LL+F++P F S E+FE KD A E
Sbjct: 361 HRLLVTGTPLQNSLKELWALLHFIMPYKFESWEDFE-------KDHEDAATKGYE----- 408
Query: 268 RRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGT-G 326
+LH + PFILRR+K +VEK LP K + IL+ +M++ QK YY+ + L G G
Sbjct: 409 -KLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKG 467
Query: 327 KSKSLQNLSMQLRKCCNHPYLFVGEYNMWRK--------EEIIRASGKFELLDRLLPKLR 378
+ N+ ++L+KCCNH L E R E+++R SGK LLD+LL +L+
Sbjct: 468 SINTFINIVIELKKCCNHALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLK 527
Query: 379 KSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFL 438
++GHRVL+FSQM R++DIL YL+ F F RLDGS K E R L FNA S F FL
Sbjct: 528 ETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFL 587
Query: 439 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEV 498
LSTRAGGLG+NL TADTVIIFDSDWNPQ D QA+ RAHRIGQK +V ++ LV+ S+EE
Sbjct: 588 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEED 647
Query: 499 ILERAKQKMGIDAKVIQ 515
I+ERAK+KM +D VIQ
Sbjct: 648 IVERAKRKMVLDHLVIQ 664
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/521 (41%), Positives = 311/521 (59%), Gaps = 41/521 (7%)
Query: 53 GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVA 112
GG L YQLEGL W+ + + ILADEMGLGKTIQTI + L + GP ++ A
Sbjct: 733 GGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSA 792
Query: 113 PKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS------------------ER 154
P + + NW EF WAP V Y G D R +RE FS +
Sbjct: 793 PLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQ 852
Query: 155 GRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTG 214
+F+VL+T Y+LI D+ L ++W ++VDE HRLKN++ + ++GY+I +LLLTG
Sbjct: 853 VKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTG 912
Query: 215 TPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVI 274
TP+QN+L+EL+ LLNFL P FN++E F E F ++ E+Q I++LH ++
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKEDQ---IKKLHDLL 960
Query: 275 RPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDT-GTGKSKSLQN 333
P +LRR K +V K +P K+++I++ ++S QK YY+ + L++ G G SL N
Sbjct: 961 GPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLN 1020
Query: 334 LSMQLRKCCNHPYLFVG--------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVL 385
+ M L+KCCNHPYLF + +I++SGK LL ++L KL++ GHRVL
Sbjct: 1021 IMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVL 1080
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+FSQMT+++D+LE +L +K+ R+DG R + +FNAP + F FLLSTRAGG
Sbjct: 1081 IFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGG 1140
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LG+NL TADTVIIFDSDWNP D QA RAHRIGQ +V ++ V+ S+EE I + AK+
Sbjct: 1141 LGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKR 1200
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 546
KM + V++ GL + + ++ L +I++ GT L D
Sbjct: 1201 KMMLTHLVVRPGLGSKAGSMS--KQELDDILKFGTEELFKD 1239
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/518 (41%), Positives = 313/518 (60%), Gaps = 40/518 (7%)
Query: 53 GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVA 112
GG+L YQLEGL W+ ++N + ILADEMGLGKT+Q++ + L++ GP +I A
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 113 PKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS------------------ER 154
P + + NW E W P V Y G D R +RE FS E
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN 718
Query: 155 GRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTG 214
+F+VL+T Y+ I D+ L ++W ++VDE HRLKN++ K ++ Y I R+LLTG
Sbjct: 719 MKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTG 778
Query: 215 TPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVI 274
TP+QN+L+EL+ LLNFL FN +E F FN ++ E+Q I +LH+++
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE---------ISKEDQ---IEKLHNLL 826
Query: 275 RPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK-SLQN 333
P +LRR K +V +P KS++I++ ++SA QK +Y+ + L+ G ++ SL N
Sbjct: 827 GPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMN 886
Query: 334 LSMQLRKCCNHPYLFVG-------EYN-MWRKEEIIRASGKFELLDRLLPKLRKSGHRVL 385
+ M+L+KCCNHPYLFV E N M+ +I+ SGKF LL ++L KL+ GHRVL
Sbjct: 887 VLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVL 946
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+FSQMTR++DI+E + +++ R+DGS + R + ++NAP + F+FLLSTRAGG
Sbjct: 947 IFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGG 1006
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LG+NL TADTVII+DSDWNP D QA RAHR+GQK +V ++ V+ S+EE I AK+
Sbjct: 1007 LGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKK 1066
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 543
KM ++ V++AGL + E L +++R GT L
Sbjct: 1067 KMLLNHLVVRAGLGGKEGKTMSKTE-LDDVLRWGTEEL 1103
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/573 (40%), Positives = 333/573 (58%), Gaps = 33/573 (5%)
Query: 51 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 110
L G LR YQL+G+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 102
Query: 111 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 170
+ P +VL NW E +AP ++ V Y G D+R ++++ E RF+VL+T Y++ ++D
Sbjct: 103 LCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQE-SRFHVLLTTYEICLKD 161
Query: 171 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 230
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 162 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 221
Query: 231 LLPTIFN--SVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 288
+ P +F+ VE+F + + K+ + L+ +++PF+LRR K EV
Sbjct: 222 VEPDLFSKEQVEDFVQRYQDIEKESESAS-----------ELYKLLQPFLLRRVKAEVAT 270
Query: 289 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 348
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 271 ELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLF 330
Query: 349 VG-EYNMWR-KEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 406
G E + + +I ASGK LLD+LL L GHRVLLFSQMT+++DIL+ YL +
Sbjct: 331 DGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGY 390
Query: 407 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 466
+ R+DGS + EER +K F P F FLLSTRAGG+G+NL ADTVI FDSD+NPQ
Sbjct: 391 SYERVDGSVRGEERHLAIKNFG--QQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQ 448
Query: 467 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 524
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F +
Sbjct: 449 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEGGHFTLGAQKP 508
Query: 525 AQDRREMLKEIMRRGTSSLGTDVPS---EREINRLAARSDEEFWLFEKM---DEERRQKE 578
A D L EI++ G L + S E ++ + +++ W+ + + +E R+ E
Sbjct: 509 AADADLQLSEILKFGLDKLLSSEGSTMHEIDLKSILGETEDGHWVSDALPTAEEGSREPE 568
Query: 579 NYRSR--LMEDHEVPEWAYSAPDNKEEQKGFEK 609
++ L E + YS +KE+++ FE+
Sbjct: 569 EGKNHMYLFEGKD-----YSKEPSKEDRESFEQ 596
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/521 (41%), Positives = 313/521 (60%), Gaps = 41/521 (7%)
Query: 53 GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVA 112
GG L YQLEGL W+ + + ILADEMGLGKT+QTI + L + GP+++ A
Sbjct: 697 GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSA 756
Query: 113 PKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERG----------------- 155
P + + NW EF WAP V Y G + R +RE FS
Sbjct: 757 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 156 -RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTG 214
+F+VL+T Y+LI D+ L ++W ++VDE HRLKN++ + ++ Y+I +LLLTG
Sbjct: 817 IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 215 TPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVI 274
TP+QN+L+EL+ LLNFL P FN++E F E F ++ E+Q I++LH ++
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKEDQ---IKKLHDLL 924
Query: 275 RPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDT-GTGKSKSLQN 333
P +LRR K +V K +P K+++I++ ++S QK YY+ + L++ G G SL N
Sbjct: 925 GPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLN 984
Query: 334 LSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVL 385
+ M L+KCCNHPYLF V + ++++SGK LL ++L KLR GHRVL
Sbjct: 985 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1044
Query: 386 LFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGG 445
+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP + F FLLSTRAGG
Sbjct: 1045 IFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGG 1104
Query: 446 LGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQ 505
LG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+ S+EE I + AK+
Sbjct: 1105 LGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKR 1164
Query: 506 KMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 546
KM + V++ GL + + + ++ L +I++ GT L D
Sbjct: 1165 KMMLTHLVVRPGLGSKSGSMT--KQELDDILKFGTEELFKD 1203
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/586 (37%), Positives = 344/586 (58%), Gaps = 44/586 (7%)
Query: 46 EQPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
+QP L+ G +L +Q+EG+ W+ + + ILADEMGLGKTIQT+ + L +
Sbjct: 255 DQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGH 314
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS----------- 152
GP +I P + L NW E WAP + V Y G R +R+ S
Sbjct: 315 CRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRE 374
Query: 153 --ERGRFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRL 210
+ +FNV++T Y+ I D +L + W ++VDE HRL++++ + +S Y+I +L
Sbjct: 375 NQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKL 434
Query: 211 LLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRL 270
LLTGTP+QN+L+EL+ LLNFL FN ++ F+ A F D ++ EEQ ++RL
Sbjct: 435 LLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQ----AEFTD-----VSKEEQ---VKRL 482
Query: 271 HHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLD-TGTGKSK 329
H ++ P +LRR K +V K +P KS+ I++ ++S+ QK +Y+ + L+ G G+
Sbjct: 483 HEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVC 542
Query: 330 SLQNLSMQLRKCCNHPYLF--------VGEYNMWRKEEIIRASGKFELLDRLLPKLRKSG 381
SL N+ M LRKCCNHPYLF + ++ + +ASGK +LL ++L +L+
Sbjct: 543 SLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADN 602
Query: 382 HRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLST 441
HRVLLFSQMT+++++LE +L+ +++ R+DGS K + R + +FN P S +F+FLLST
Sbjct: 603 HRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLST 662
Query: 442 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILE 501
RAGGLG+NL TADTVIIFDSDWNP D QA RAHR+GQKK+V ++ V+ S+EE I++
Sbjct: 663 RAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQ 722
Query: 502 RAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTDVPSEREINRLAARSD 561
AK KM + V++ G+ T+ ++ L++I+R GT L D SE A +D
Sbjct: 723 VAKHKMMLTHLVVRPGMGGMTTNFS--KDELEDILRFGTEDLFKDGKSEAIHYDDKAVAD 780
Query: 562 EEFWLFEKMDEERRQKENYRSRLMEDHEVPEWAYSAPDNKEEQKGF 607
L ++ + +KE++ + + +V +Y+ ++ EE +
Sbjct: 781 ----LLDRTNRGIEEKESWANEYLSSFKVA--SYATKEDHEEHDDY 820
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/494 (43%), Positives = 304/494 (61%), Gaps = 20/494 (4%)
Query: 56 LRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPKA 115
LR YQL+G++W+ N IL DEMGLGKT QTI+L+AY + + GP +++ P A
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 116 VLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRDRQYLK 175
VL NW E + PS++ + Y G ++R +++ S+ RF+VL+T Y++ ++D +YLK
Sbjct: 95 VLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSD-PRFHVLLTTYEMCLKDARYLK 153
Query: 176 KVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNFLLPTI 235
+W ++VDE HRLKN E L +T+ + + R+LLTGTPIQN+LQE++SLL F+ P++
Sbjct: 154 SWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSV 213
Query: 236 FNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYLPGKSQ 295
F E E++ NA + + AL DE LH V++PF+LRR K EV LP K++
Sbjct: 214 FLP-EAVEDFVNAYADIQTEPALVDE--------LHQVLQPFLLRRVKAEVAAELPKKTE 264
Query: 296 VILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG----E 351
+++ +SA QK YY+ + T L N+ MQLRKC +HPYLF G
Sbjct: 265 LVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEP 324
Query: 352 YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRL 411
+ M E ++ ASGK LLD +L L++ GH VLLFSQMTR++DIL+ YL+ + + RL
Sbjct: 325 FEM--GEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERL 382
Query: 412 DGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQA 471
DGS + EER +K F+ D F+FLLST+AGG+G+NL ADTVI D D+NPQ D QA
Sbjct: 383 DGSVRGEERNLAIKNFSTKD--VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQA 440
Query: 472 EDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRRE- 530
RAHRIGQ + V+V L+ +IEE+I RA K+ + VI+ G F+ AQ
Sbjct: 441 AARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASG 500
Query: 531 -MLKEIMRRGTSSL 543
L EI++ G L
Sbjct: 501 LQLSEILKFGVDKL 514
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 323/574 (56%), Gaps = 35/574 (6%)
Query: 51 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 110
L G LR+YQLEG+ W+ F+ IL DEMGLGKT QTIAL YL GP +I
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 100
Query: 111 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 170
+ P +VL NW E +AP ++ V Y G +ER ++++ E RF+VL+T Y++ ++D
Sbjct: 101 LCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQE-SRFHVLLTTYEICLKD 159
Query: 171 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 230
+LK W ++VDE HRLKN L KT+S + + LLLTGTPIQNSLQEL+SLL+F
Sbjct: 160 ASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 231 LLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEKYL 290
+ P +F+ E F R Q + E LH +++PF+LRR K EV L
Sbjct: 220 VEPDLFSKEE------VGDFIQRYQDIEKESES---ASELHKLLQPFLLRRVKAEVATEL 270
Query: 291 PGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLFVG 350
P K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF G
Sbjct: 271 PKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDG 330
Query: 351 --EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDFKF 408
+ + ASGK LLD+LL L GHRVLLFSQMT+++DIL+ Y+ + +
Sbjct: 331 VEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSY 390
Query: 409 LRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 468
R+DGS + EER +K F P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ D
Sbjct: 391 ERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQND 448
Query: 469 QQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFN--TTSTAQ 526
QA RAHRIGQ K V+V L+ ++EE++ +A K+ + +I+ G F A
Sbjct: 449 LQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAA 508
Query: 527 DRREMLKEIMRRGTSSLGTDVPS---EREINRLAARSDEEFWLFEKM--------DEERR 575
D L EI++ G L S E ++ + + + W+ + + D+E
Sbjct: 509 DADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEG 568
Query: 576 QKENYRSRLMEDHEVPEWAYSAPDNKEEQKGFEK 609
+ Y L E + YS +KE++K FE+
Sbjct: 569 KNHMY---LFEGKD-----YSKEPSKEDRKSFEQ 594
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/499 (42%), Positives = 297/499 (59%), Gaps = 20/499 (4%)
Query: 51 LQGGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVI 110
L G LR+YQLEG+ W++ F+ IL DEMGLGKT QTIAL+ YL+ GP ++
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLV 94
Query: 111 VAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFSERGRFNVLITHYDLIMRD 170
+ P +VL NW E +AP ++ V Y G +ER ++++ E G F+VL+T Y++ ++D
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESG-FHVLLTTYEICLKD 153
Query: 171 RQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQELWSLLNF 230
+LK W + VDE HRLKN L +T+S + RLLLTGTPIQNSL+EL+SLL
Sbjct: 154 ASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCV 213
Query: 231 LLPTIF--NSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKDEVEK 288
+ P +F VE+F + + K+ + LH +++PF+LRR K +V
Sbjct: 214 VEPDLFCREQVEDFVQRYQDIEKESKSAS-----------ELHRLLQPFLLRRVKAQVAT 262
Query: 289 YLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNLSMQLRKCCNHPYLF 348
LP K++V++ MSA QK YY+ + + T K LQN+ QLRKC +HPYLF
Sbjct: 263 ELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLF 322
Query: 349 VG--EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLFSQMTRLMDILEIYLKLNDF 406
G E +I ASGK LLDRLL L GHRVLLFSQMT ++DIL+ Y+ +
Sbjct: 323 DGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGY 382
Query: 407 KFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQ 466
+ R+DGS + EER +K F + P F+FLLSTRAGG+G+NL ADTVI DSD+NPQ
Sbjct: 383 SYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQ 440
Query: 467 MDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS--T 524
D QA RAHRIGQ K V+V L+ ++EE++ +A K+ + VI+ G F +
Sbjct: 441 NDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKP 500
Query: 525 AQDRREMLKEIMRRGTSSL 543
+ + L EI++ G L
Sbjct: 501 SAEADFQLSEILKFGLDKL 519
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/529 (41%), Positives = 314/529 (59%), Gaps = 43/529 (8%)
Query: 47 QPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGV 104
QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 708 QPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 767
Query: 105 TGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS-----ERG---- 155
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 768 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKA 827
Query: 156 ---------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQI 206
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++GY +
Sbjct: 828 SRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSL 887
Query: 207 QRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLI 266
Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 888 QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----- 935
Query: 267 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDT-GT 325
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+ G
Sbjct: 936 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGG 995
Query: 326 GKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRLLPKL 377
G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++L L
Sbjct: 996 GNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNL 1055
Query: 378 RKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMF 437
++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP + F F
Sbjct: 1056 KEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCF 1115
Query: 438 LLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEE 497
LLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+ S+EE
Sbjct: 1116 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1175
Query: 498 VILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 546
I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1176 RITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1222
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/529 (41%), Positives = 314/529 (59%), Gaps = 43/529 (8%)
Query: 47 QPTLLQ--GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGV 104
QP L GG L YQ+EGL W+ + + ILADEMGLGKT+QT + L +
Sbjct: 715 QPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHS 774
Query: 105 TGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS-----ERG---- 155
GP ++ AP + + NW EF WAP + V Y G D R +RE FS RG
Sbjct: 775 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKA 834
Query: 156 ---------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQI 206
+F+VL+T Y+LI D L + W +IVDE HRLKN++ + ++GY +
Sbjct: 835 SRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSL 894
Query: 207 QRRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLI 266
Q +LLLTGTP+QN+L+EL+ LLNFL P F+++E F E F +A D+
Sbjct: 895 QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKEDQ----- 942
Query: 267 IRRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDT-GT 325
I++LH ++ P +LRR K +V K +P K+++I++ ++S QK YY+ + L+ G
Sbjct: 943 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGG 1002
Query: 326 GKSKSLQNLSMQLRKCCNHPYLFVGEY--------NMWRKEEIIRASGKFELLDRLLPKL 377
G SL N+ M L+KCCNHPYLF M+ +IRASGK LL ++L L
Sbjct: 1003 GNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNL 1062
Query: 378 RKSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMF 437
++ GHRVL+FSQMT+++D+LE +L+ +K+ R+DG R + +FNAP + F F
Sbjct: 1063 KEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCF 1122
Query: 438 LLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEE 497
LLSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ K+V ++ V+ S+EE
Sbjct: 1123 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE 1182
Query: 498 VILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSLGTD 546
I + AK+KM + V++ GL + T + ++ L +I++ GT L D
Sbjct: 1183 RITQVAKKKMMLTHLVVRPGLGSKTGSMS--KQELDDILKFGTEELFKD 1229
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 55 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 114
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1015
Query: 115 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 164
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1016 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1074
Query: 165 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 224
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1075 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1134
Query: 225 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 284
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1135 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1182
Query: 285 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 342
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1183 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1242
Query: 343 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 387
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1243 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1302
Query: 388 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 447
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1303 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1362
Query: 448 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 507
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1363 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1422
Query: 508 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 540
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1423 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1458
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 55 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 114
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1025
Query: 115 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 164
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1026 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1084
Query: 165 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 224
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1085 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1144
Query: 225 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 284
+SLL+FL P+ F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1145 FSLLHFLEPSRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1192
Query: 285 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 342
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1193 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCC 1252
Query: 343 NHPYLFVG---------------EYNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 387
NHPYL G E ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1253 NHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1312
Query: 388 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 447
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1313 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1372
Query: 448 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 507
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1373 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1432
Query: 508 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 540
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1433 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1468
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/525 (40%), Positives = 309/525 (58%), Gaps = 41/525 (7%)
Query: 46 EQPTLLQGG--ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKG 103
+QP L+G +L YQ+EG+ W+ + ++ ILADEMGLGKTIQT+ + L +
Sbjct: 718 DQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGH 777
Query: 104 VTGPHVIVAPKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMREEFFS-ERG------- 155
GP ++ P + L NW EF WAP + Y G D R +RE S E G
Sbjct: 778 CRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKV 837
Query: 156 --------RFNVLITHYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQ 207
+FNVL+T Y+LI D L + W ++VDE HRLK+++ + ++ Y I
Sbjct: 838 SRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIA 897
Query: 208 RRLLLTGTPIQNSLQELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLII 267
+LLLTGTP+QN+L+EL+ LLNFL FN ++ F+ F ++ EEQ +
Sbjct: 898 YKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEF---------ADVSKEEQ---V 945
Query: 268 RRLHHVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGK 327
+RLH ++ P +LRR K +V K +P KS+ I++ ++SA QK +Y+ + L++ +G
Sbjct: 946 KRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGG 1005
Query: 328 -SKSLQNLSMQLRKCCNHPYLFVGEYN--------MWRKEEIIRASGKFELLDRLLPKLR 378
S SL N+ M L+KCCNHPYLF ++ + +A+GK LL ++L +L+
Sbjct: 1006 GSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLK 1065
Query: 379 KSGHRVLLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFL 438
HRVL+FSQMT+++DILE +L+ +K+ R+DG R + +FNAP + F+FL
Sbjct: 1066 AQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFL 1125
Query: 439 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEV 498
LSTRAGGLG+NL TADTVII+DSDWNP D QA RAHRIGQ +V ++ V+ S+EE
Sbjct: 1126 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEER 1185
Query: 499 ILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLKEIMRRGTSSL 543
+ + AK+KM + V++ G+ A ++ L +I+R GT L
Sbjct: 1186 VTQVAKRKMMLTHLVVRPGM--GGKGANFTKQELDDILRFGTEDL 1228
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 318/516 (61%), Gaps = 44/516 (8%)
Query: 55 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 114
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+I + Y + KG+ GP +++AP
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1026
Query: 115 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMR--EEFFSE-RGR-------FNVLITHY 164
+ +PNW EF TW + VVY G R+ ++ E +F + +GR F+ +IT +
Sbjct: 1027 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1085
Query: 165 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 224
++I+ D L+ + W +++DE HRLKN C L + + ++ ++LLTGTP+QN+++EL
Sbjct: 1086 EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1145
Query: 225 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 284
+SLL+FL P F S F + F L EEQ +++L +++P +LRR K+
Sbjct: 1146 FSLLHFLEPGRFPSETTFMQEFGD---------LKTEEQ---VQKLQAILKPMMLRRLKE 1193
Query: 285 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSK--SLQNLSMQLRKCC 342
+VEK L K + I++ +++ QK YY+ + + L G G++ +L N M+LRKCC
Sbjct: 1194 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCC 1253
Query: 343 NHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 387
NHPYL G +N ++ + +I+A+GK L+D+LLPKL+ GHRVL+F
Sbjct: 1254 NHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIF 1313
Query: 388 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 447
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1314 SQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLG 1373
Query: 448 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 507
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+++ L++ S E + ++A K+
Sbjct: 1374 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKL 1433
Query: 508 GIDAKVIQ--AGLFNTTSTAQD-RREMLKEIMRRGT 540
G+D V+Q +G N T+ Q ++ +++++R+G
Sbjct: 1434 GLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGA 1469
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 320/517 (61%), Gaps = 43/517 (8%)
Query: 53 GGELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVA 112
G +LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IAL++ + + GV P +I+A
Sbjct: 844 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMF-SAGVQSPFMIIA 902
Query: 113 PKAVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFS--ERG-------RFNVLIT 162
P + + NW EFS W + A+VY G R+ +++ E + ++G +F+ LIT
Sbjct: 903 PLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALIT 961
Query: 163 HYDLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQ 222
+++I+ D L+++ W +++DE HRLKN C L ++ +I+ ++LLTGTP+QN+++
Sbjct: 962 TFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVE 1021
Query: 223 ELWSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRK 282
EL+SLL+FL P F S F F L EEQ +++L +++P +LRR
Sbjct: 1022 ELFSLLHFLEPAQFPSEIEFLREFGD---------LKTEEQ---VQKLQSILKPMMLRRL 1069
Query: 283 KDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKSKSLQNL---SMQLR 339
K++VEK L K + I++ +++ QK YY+ + + L G ++ ++ NL M+LR
Sbjct: 1070 KEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELR 1129
Query: 340 KCCNHPYLFVGE-----------YNM----WRKEEIIRASGKFELLDRLLPKLRKSGHRV 384
KCCNHPYL G Y+ + + ++R++GK LLD+LLP+L+ GH+V
Sbjct: 1130 KCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKV 1189
Query: 385 LLFSQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAG 444
L+FSQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAG
Sbjct: 1190 LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG 1249
Query: 445 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAK 504
GLG+NL ADT +IFDSDWNPQ D QA+ R HRIGQ K V+V+ L++ S E +L++A
Sbjct: 1250 GLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKAS 1309
Query: 505 QKMGIDAKVIQAGLFNTTSTAQD-RREMLKEIMRRGT 540
K+G+D V+Q+ N S+ Q ++ +++++R+G
Sbjct: 1310 LKLGLDRAVLQSMSGNKESSIQQFSKKEIEDLLRKGA 1346
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/516 (40%), Positives = 317/516 (61%), Gaps = 44/516 (8%)
Query: 55 ELRAYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVTGPHVIVAPK 114
+LR YQLEG+ W+L + N N ILADEMGLGKTIQ+IA + + N G+ GP +++AP
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVY-NVGIHGPFLVIAPL 868
Query: 115 AVLPNWINEFSTWAPSIAAVVYDGRPDERKAMRE-EFFSE--RGR-------FNVLITHY 164
+ + NW EF+TW + +VY G R+ +++ E + + RGR F+ LIT +
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 165 DLIMRDRQYLKKVQWIYMIVDEGHRLKNHECALAKTISGYQIQRRLLLTGTPIQNSLQEL 224
++I+ D L++++W +I+DE HRLKN C L ++ ++ ++LLTGTP+QN+++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 225 WSLLNFLLPTIFNSVENFEEWFNAPFKDRGQVALTDEEQLLIIRRLHHVIRPFILRRKKD 284
+SLL+FL P+ F S F KD G L EEQ +++L +++P +LRR K+
Sbjct: 988 FSLLHFLEPSQFPSESEF-------LKDFGD--LKTEEQ---VQKLQAILKPMMLRRLKE 1035
Query: 285 EVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDTGTGKS--KSLQNLSMQLRKCC 342
+VEK L K + I++ +++ QK YY+ + + L G G + +L N M+LRKCC
Sbjct: 1036 DVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCC 1095
Query: 343 NHPYLFVGE---------------YNMWRKEEIIRASGKFELLDRLLPKLRKSGHRVLLF 387
NHPYL G + + + ++R++GK L+D+LLPKL+ GH+VL+F
Sbjct: 1096 NHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIF 1155
Query: 388 SQMTRLMDILEIYLKLNDFKFLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLG 447
SQM R +DILE YL + + R+DG + R + +F+ PDS F+FLL TRAGGLG
Sbjct: 1156 SQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG 1215
Query: 448 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 507
+NL ADT IIFDSDWNPQ D QA+ R HRIGQ K V+V+ L++ S E + ++A K+
Sbjct: 1216 INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKL 1275
Query: 508 GIDAKVIQAGL---FNTTSTAQDRREMLKEIMRRGT 540
G+D V+Q+ N T Q ++ +++++R+G
Sbjct: 1276 GLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGA 1311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,698,122
Number of Sequences: 539616
Number of extensions: 12447698
Number of successful extensions: 35874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 375
Number of HSP's that attempted gapping in prelim test: 33694
Number of HSP's gapped (non-prelim): 1332
length of query: 773
length of database: 191,569,459
effective HSP length: 125
effective length of query: 648
effective length of database: 124,117,459
effective search space: 80428113432
effective search space used: 80428113432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)