Query 004108
Match_columns 773
No_of_seqs 335 out of 2364
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 14:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 3E-149 1E-153 1334.8 78.9 749 5-772 64-857 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 1E-144 3E-149 1298.9 78.4 745 5-772 4-789 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 1E-145 3E-150 1311.0 67.7 750 4-772 5-797 (909)
4 1z5h_A Tricorn protease intera 100.0 1E-132 3E-137 1178.7 60.8 685 14-771 1-686 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 1.8E-99 6E-104 898.0 52.4 707 6-763 9-770 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 2.3E-91 8E-96 819.3 59.6 704 11-758 11-789 (889)
7 3b34_A Aminopeptidase N; prote 100.0 1.4E-90 4.9E-95 818.7 60.0 708 5-763 31-793 (891)
8 3cia_A Cold-active aminopeptid 100.0 2.1E-84 7.3E-89 747.5 23.8 527 7-619 19-561 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 1.3E-82 4.5E-87 733.0 30.2 445 7-476 6-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 1.2E-81 4.2E-86 726.4 22.5 529 7-619 21-589 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 5.3E-57 1.8E-61 498.9 34.2 299 456-772 1-306 (419)
12 4fgm_A Aminopeptidase N family 100.0 1.5E-28 5E-33 279.3 20.8 298 154-459 119-451 (597)
13 1bqb_A Protein (aureolysin); h 85.0 2.7 9.2E-05 42.6 8.7 106 234-340 68-178 (301)
14 1u4g_A Elastase, pseudolysin; 83.0 42 0.0014 33.8 19.8 98 233-341 73-175 (301)
15 3dnz_A Thermolysin; hydrolase, 80.5 2.7 9.2E-05 42.8 6.7 105 232-341 69-177 (316)
16 4ger_A Gentlyase metalloprotea 78.7 3.2 0.00011 41.9 6.5 109 232-351 62-177 (304)
17 3cqb_A Probable protease HTPX 78.2 1.6 5.6E-05 36.9 3.7 67 239-316 27-98 (107)
18 2vqx_A Metalloproteinase; ther 76.9 4.3 0.00015 41.8 7.0 104 233-341 90-197 (341)
19 2y3u_A Collagenase, collagenas 73.4 1.3 4.4E-05 51.0 2.2 39 301-339 422-469 (785)
20 1lsh_A Lipovitellin (LV-1N, LV 69.6 14 0.00046 44.9 10.1 194 550-762 356-557 (1056)
21 2qk1_A Protein STU2; STU2P, XM 49.9 1.4E+02 0.0049 28.8 12.0 132 565-715 29-176 (249)
22 2ejq_A Hypothetical protein TT 42.1 9.3 0.00032 33.4 1.6 44 278-324 68-111 (130)
23 3isy_A Bsupi, intracellular pr 40.7 1.7E+02 0.0058 24.9 9.4 26 87-112 81-106 (120)
24 3nqx_A MCP-02, secreted metall 38.7 3.1E+02 0.011 27.4 20.1 99 233-341 74-176 (306)
25 3c37_A Peptidase, M48 family; 35.8 45 0.0015 32.7 5.7 19 298-316 97-115 (253)
26 1r55_A ADAM 33; metalloproteas 35.4 29 0.00098 33.2 4.0 14 300-313 135-148 (214)
27 2w15_A Zinc metalloproteinase 31.1 57 0.0019 30.6 5.3 14 300-313 135-148 (202)
28 1bud_A Protein (acutolysin A); 30.7 53 0.0018 30.7 5.0 13 301-313 133-145 (197)
29 1yp1_A FII; FII hydrolase; 1.9 30.3 50 0.0017 31.1 4.8 13 301-313 135-147 (202)
30 3lmc_A Peptidase, zinc-depende 28.9 1.5E+02 0.0052 27.9 7.6 20 294-313 136-155 (210)
31 1oyz_A Hypothetical protein YI 28.3 3.7E+02 0.013 25.8 11.3 97 659-766 142-238 (280)
32 3s51_A Protein FACI, fanconi a 28.3 1.1E+02 0.0039 37.1 8.1 139 548-687 39-183 (1308)
33 2ero_A VAP-1, vascular apoptos 28.2 64 0.0022 34.4 5.7 14 300-313 145-158 (427)
34 3iuk_A Uncharacterized protein 23.8 1.1E+02 0.0039 33.7 6.8 54 406-459 495-554 (562)
35 1atl_A Atrolysin C; metalloend 23.8 51 0.0017 31.0 3.5 13 301-313 136-148 (202)
36 1qua_A Acutolysin-C, hemorrhag 22.9 55 0.0019 30.6 3.5 13 301-313 135-147 (197)
37 3e11_A Predicted zincin-like m 22.4 52 0.0018 27.9 2.8 35 277-313 68-102 (114)
38 4fca_A Conserved domain protei 22.3 63 0.0022 35.4 4.3 56 396-451 318-378 (525)
39 2c9r_A COPC, copper resistance 22.2 2.6E+02 0.0089 22.8 7.1 21 85-106 64-84 (102)
40 1kuf_A Atrolysin E, metallopro 21.6 53 0.0018 30.9 3.1 14 300-313 137-150 (203)
41 3k7n_A K-like; SVMP, hydrolase 21.3 1E+02 0.0034 32.5 5.5 14 300-313 138-151 (397)
42 2e3x_A Coagulation factor X-ac 21.0 47 0.0016 35.5 2.8 14 300-313 138-151 (427)
43 3o0y_A Lipoprotein; structural 20.9 2.9E+02 0.01 30.8 9.3 45 300-344 431-485 (609)
44 1lyq_A PCOC copper resistance 20.0 2.8E+02 0.0097 22.7 6.9 21 85-106 66-86 (104)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=3.4e-149 Score=1334.76 Aligned_cols=749 Identities=35% Similarity=0.612 Sum_probs=679.7
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCC--ccccCeeEEEe
Q 004108 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (773)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~--~~~~~~~~~~~ 82 (773)
-.++|||.+++|.||+|+|++|+++.+|+|+|+|++++.++++.|+||+++|+|++|.+.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 3568999999999999999999999999999999999999999999999999999999875321100 01111222333
Q ss_pred cCCeEEEEEeCCCCCcc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeeccCCcCCCCceeeccCCCCCceEEEE
Q 004108 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (773)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (773)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 89999999999999999999999976 79899999999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCcccee-eecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHH
Q 004108 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (773)
Q Consensus 161 ~i~~p~~~~~isn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (773)
+|++|++|+|+|||++.++ ...+++++++|+.|+||||||+||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345778999999999999999999999999988766779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcC
Q 004108 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (773)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 319 (773)
+++++++||++||+|||++|+|+|++|+|..||||||||++|++..+|+++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCchhhHHHHHHHHHhhhhccccCCCCceeeecCCchhhccccccccccchhHHH
Q 004108 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (773)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (773)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557888999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 004108 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 452 (773)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------sg~~l~~~~~~W~ 452 (773)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.||++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCceeEEEEEeCCEEEEEEEeeecCCCC---------CCCeeEEEEEEEeCcccceeeEEeecceeEEEecccccccc
Q 004108 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 523 (773)
Q Consensus 453 ~~~G~P~~~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (773)
.|+|||+++|++++++++|+|+||+.++.. .+..|+|||+|.+.+++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999999999999999875432 23589999999887655445577776666666542
Q ss_pred cCCCCCCceEEeccCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCC
Q 004108 524 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 601 (773)
Q Consensus 524 ~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 601 (773)
.+ +||++|.++.||||||||+++|.+|+++|..+ .|++.||||||+|+|+||++|.++++.+|++++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 89999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 004108 602 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 680 (773)
Q Consensus 602 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~g~~~c~~~ 680 (773)
+|+||.+++..|.++.+++... .++.++.|++|+++++.++++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 25678899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 004108 681 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 760 (773)
Q Consensus 681 a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d~~ll~~~L~~~ 760 (773)
|+++|++|++++....||||+|.+|||++++ ++++|+++|++|+++++++||..+|.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999987643 48899999999999999999999999999999999999999999
Q ss_pred cCCC-CCCCcccc
Q 004108 761 LSSE-PRCCVWTC 772 (773)
Q Consensus 761 l~~~-vr~qD~~~ 772 (773)
+++. ||+||+..
T Consensus 845 l~~~~i~~qd~~~ 857 (967)
T 3se6_A 845 MEGKVIKTQNLAA 857 (967)
T ss_dssp HHCSSSCGGGHHH
T ss_pred hCcCcCcHhHHHH
Confidence 9874 99999753
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=9.9e-145 Score=1298.88 Aligned_cols=745 Identities=33% Similarity=0.593 Sum_probs=679.5
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCCccc--cCeeEEEe
Q 004108 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELV 82 (773)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~--~~~~~~~~ 82 (773)
-+++|||.+++|.||+|+|++|+++.+|+|+++|++++.++++.|+||+.+|+|+++++.+..+ ..+ ....+..+
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~ 80 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEH 80 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEc
Confidence 4578999999999999999999999999999999999998899999999999999999875211 112 22345567
Q ss_pred cCCeEEEEEeCCCCCcc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeeeccCCcCCCCceeeccCCCCCceEEEE
Q 004108 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (773)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (773)
..++.++|.++++|++| .++|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||||++||+|+|
T Consensus 81 ~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~i 160 (897)
T 2xdt_A 81 PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSI 160 (897)
T ss_dssp TTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEE
T ss_pred CCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEE
Confidence 77889999999999999 79999999999999999999999965 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCccceee-ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHH
Q 004108 161 TLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (773)
Q Consensus 161 ~i~~p~~~~~isn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (773)
+|++|++|+|+|||++.++. ..+++++++|+.++|||||++||+||+|..++..+.+|+++++|++|+..++++++++.
T Consensus 161 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~ 240 (897)
T 2xdt_A 161 KIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDA 240 (897)
T ss_dssp EEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHH
T ss_pred EEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHH
Confidence 99999999999999988763 45678999999999999999999999999988656778999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcC
Q 004108 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (773)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 319 (773)
+++++++|+++||+|||++|+|+|++|+|..||||||||++|++..+|+++..++...++.++.+||||+|||||||+||
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT 320 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVT 320 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEE
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCchhhHHHHHHHHHhhhhccccCCCCceeeecCCchhhccccccccccchhHHH
Q 004108 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (773)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (773)
|+||+|+|||||||+|++++++++.+|+|.++.+|......++..|+...+||+..++.++.++...|+.++|.||++||
T Consensus 321 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl 400 (897)
T 2xdt_A 321 MEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACIL 400 (897)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHH
Confidence 99999999999999999999999999999988888554557788899999999998898999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc-------------------c--------CCCHHHHHHHhh
Q 004108 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWT 452 (773)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------s--------g~~l~~~~~~W~ 452 (773)
|||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.||++||++|+
T Consensus 401 ~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~ 480 (897)
T 2xdt_A 401 NMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWT 480 (897)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999996 6 899999999999
Q ss_pred cCCCceeEEEEEeCCEEEEEEEeeecCCCC---CCCeeEEEEEEEeCcccceeeEEeecceeEEEecccccccccCCCCC
Q 004108 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 529 (773)
Q Consensus 453 ~~~G~P~~~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (773)
+|+|||+++|++++++++|+|+||+.++.. ....|+|||+|.+.++......|+..++..+.++. .+
T Consensus 481 ~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~- 550 (897)
T 2xdt_A 481 LQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV- 550 (897)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC-
T ss_pred cCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC-
Confidence 999999999999989999999999876532 24589999999876554445678877666665532 34
Q ss_pred CceEEeccCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCCchhHHH
Q 004108 530 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLS 607 (773)
Q Consensus 530 ~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~ 607 (773)
+||++|.++.|||||+||+++|..|+++|..+ .|++.+|||||+|+|+||++|.++++.+|+|++||++|++|+||.
T Consensus 551 -~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~ 629 (897)
T 2xdt_A 551 -EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVF 629 (897)
T ss_dssp -SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHH
T ss_pred -ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 79999999999999999999999999999753 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccChHHH---HHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 004108 608 NLITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKR 684 (773)
Q Consensus 608 ~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~g~~~c~~~a~~~ 684 (773)
+++..|.+|.+++...+ .+ +.|++|+++++.+++++|||+. ++++.++++|..++.+||.+|+++|+++|+++
T Consensus 630 ~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~ 705 (897)
T 2xdt_A 630 QGLNELIPMYKLMEKRD--MNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGY 705 (897)
T ss_dssp HHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCh--hhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999987643 45 7899999999999999999987 67899999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCC-
Q 004108 685 FHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS- 763 (773)
Q Consensus 685 f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d~~ll~~~L~~~l~~- 763 (773)
|++|++++..+.||||+|.+|||+++ |++++|+++|++|+++++++||..+|.||||++|+++|+++|++++++
T Consensus 706 f~~~~~~~~~~~i~~~lr~~vy~~~~-----g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~ 780 (897)
T 2xdt_A 706 FRKWKESNGNLSLPVDVTLAVFAVGA-----QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGD 780 (897)
T ss_dssp HHHHHHTTTCSCCCHHHHHHHHHHHT-----TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCcCCCCcchhhhEEEEec-----CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCC
Confidence 99999875445799999999988753 799999999999999999999999999999999999999999999975
Q ss_pred CCCCCcccc
Q 004108 764 EPRCCVWTC 772 (773)
Q Consensus 764 ~vr~qD~~~ 772 (773)
.||+||...
T Consensus 781 ~i~~qd~~~ 789 (897)
T 2xdt_A 781 KIKTQEFPQ 789 (897)
T ss_dssp SSCGGGHHH
T ss_pred CCcHHHHHH
Confidence 599999753
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=9.9e-146 Score=1310.97 Aligned_cols=750 Identities=34% Similarity=0.560 Sum_probs=670.5
Q ss_pred cCCCCCCCCCceeeEEEEEEEecCCC-----CeEEEEEEEEEEEEcCCCEEEEEecCcEEeEE----EeeeccCCCCccc
Q 004108 4 FKGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKAL 74 (773)
Q Consensus 4 ~~~~~rLp~~v~p~~Y~l~l~~d~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~~~~~~~~~~~~~ 74 (773)
+-+++|||.+|+|+||+|+|++|++. .+|+|+|+|++++.++++.|+||+++|+|+.+ .+.+. +.....
T Consensus 5 P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~--~~~~~~ 82 (909)
T 4fke_A 5 PWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV--GDSQVP 82 (909)
T ss_dssp GGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES--TTCCCC
T ss_pred CcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC--CCccee
Confidence 44689999999999999999988643 58999999999999999999999999999763 23221 112233
Q ss_pred cCeeEEEecCCeEEEEEeCCCCCcc-eEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeeeccCCcCCCCceeeccCCCC
Q 004108 75 EPTKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPA 153 (773)
Q Consensus 75 ~~~~~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~ 153 (773)
......++...+.++|.++++|++| .|+|+|.|+|++++++.|||++.|.++|..+++++|||||++||+||||||||+
T Consensus 83 ~~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~ 162 (909)
T 4fke_A 83 EIDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPA 162 (909)
T ss_dssp CEEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTT
T ss_pred cccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccc
Confidence 4456778889999999999999999 899999999999999999999999988999999999999999999999999999
Q ss_pred CceEEEEEEEeCCCCeEeecCccceee----ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCc
Q 004108 154 CKATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGK 229 (773)
Q Consensus 154 ~ka~f~i~i~~p~~~~~isn~~~~~~~----~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~ 229 (773)
+||+|+|+|++|++|+|+|||++.++. .++++++++|+.||||||||+||+||+|..++..+.+|+++++|++|+.
T Consensus 163 ~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~ 242 (909)
T 4fke_A 163 MKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNA 242 (909)
T ss_dssp SCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHH
T ss_pred cceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecch
Confidence 999999999999999999999987652 2467999999999999999999999999998877788999999999986
Q ss_pred hh--hHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHH
Q 004108 230 AN--QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAH 307 (773)
Q Consensus 230 ~~--~~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaH 307 (773)
.+ +++++++.+++++++||++||+|||++|+|+|++|+|..||||||||++|++..+|++++.++...+++++.+|||
T Consensus 243 ~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaH 322 (909)
T 4fke_A 243 IAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAH 322 (909)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHH
Confidence 54 4579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcCccccchhHHhhhHHHHHHHHHhhhhCCchhhHHHHHHHHH-hhhhccccCCCCceeee---cCCchhh
Q 004108 308 ELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEI 383 (773)
Q Consensus 308 ElaHqWfGnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~---~~~~~~~ 383 (773)
|+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.++
T Consensus 323 ElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i 402 (909)
T 4fke_A 323 ELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQI 402 (909)
T ss_dssp HHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHH
T ss_pred HHHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhH
Confidence 9999999999999999999999999999999999999999999988877655 67888999999999875 6678889
Q ss_pred ccccccccccchhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC--------CHHHHHHHhhcCC
Q 004108 384 DEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQK 455 (773)
Q Consensus 384 ~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~--------~l~~~~~~W~~~~ 455 (773)
+..|+.++|.||++|||||+..||++.|++||+.|+++|+|++++++|||++|++++|. +|++||++|+.|+
T Consensus 403 ~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~ 482 (909)
T 4fke_A 403 SEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQM 482 (909)
T ss_dssp HTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSC
T ss_pred HhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999875 5999999999999
Q ss_pred CceeEEEEEeCCEEEEEEEeeecCCCC-------CCCeeEEEEEEEeCcccceeeEEeec-ceeEEEecccccccccCCC
Q 004108 456 GYPVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKEG 527 (773)
Q Consensus 456 G~P~~~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 527 (773)
|||+|+|+++.+. ++|+||+..... .+..|+|||++.+.+.... ..++.. ......+.. ...
T Consensus 483 G~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~ 552 (909)
T 4fke_A 483 GFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQD-HYWLRDVSQAQNDLFK-------TAS 552 (909)
T ss_dssp SCEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECC-CEEECSCSEEECGGGC-------CCT
T ss_pred CCcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccc-eEEeeccccceeeecc-------CCC
Confidence 9999999887765 678888765421 1237999999987643322 233332 222222211 223
Q ss_pred CCCceEEeccCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCCchhH
Q 004108 528 DNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTV 605 (773)
Q Consensus 528 ~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~ 605 (773)
+ +||++|.++.||||||||+++|.+|+++|..+ .|++.+|||||+|+|+||++|.++++.+|+++.||++|++|+|
T Consensus 553 ~--~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~ 630 (909)
T 4fke_A 553 D--DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMP 630 (909)
T ss_dssp T--CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHH
T ss_pred C--CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHH
Confidence 4 89999999999999999999999999999864 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 004108 606 LSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNEA 681 (773)
Q Consensus 606 w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lR~~v~~~ac~~g~~~c~~~a 681 (773)
|.+++..|.++..++.+ ++.+..|++|+++++.++++++||... .++++.++.+|..++.+||.+|+++|+++|
T Consensus 631 w~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~a 708 (909)
T 4fke_A 631 WQAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLA 708 (909)
T ss_dssp HHHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999876 347889999999999999999965432 357888999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhc
Q 004108 682 SKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLL 761 (773)
Q Consensus 682 ~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d~~ll~~~L~~~l 761 (773)
+++|++|+++++++.||||+|.+|||++ +++|+.++|++++++|+++++++||..+|.||||++|+++|+++|++++
T Consensus 709 ~~~f~~~~~~~~~~~i~~dlr~~vy~~~---~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l 785 (909)
T 4fke_A 709 KTLFDQWMSDPENNPIHPNLRSTIYCNA---IAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTL 785 (909)
T ss_dssp HHHHHHHHTCTTSCCSCTTTHHHHHHHH---HHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCCCcCCHHHHHHHHHHH---HHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Confidence 9999999988767789999999888764 5589999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCcccc
Q 004108 762 SS-EPRCCVWTC 772 (773)
Q Consensus 762 ~~-~vr~qD~~~ 772 (773)
++ .||+||+..
T Consensus 786 ~~~~ir~qd~~~ 797 (909)
T 4fke_A 786 NPDLIRKQDATS 797 (909)
T ss_dssp CTTTSCGGGHHH
T ss_pred CCCCCchhhHHH
Confidence 97 599999753
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=9.9e-133 Score=1178.68 Aligned_cols=685 Identities=33% Similarity=0.588 Sum_probs=620.1
Q ss_pred ceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEecCCeEEEEEeC
Q 004108 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (773)
Q Consensus 14 v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (773)
|+|.||+|+|++++++.+|+|+|+| + ++++.|+||+++|+|++|++++. +..+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g~---------~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNGR---------DTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETTE---------ECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEece---------eccEEEEC--CEEEEEeC
Confidence 6799999999999999999999999 3 67899999999999999998641 23334433 47777765
Q ss_pred CCCCcceEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeeeccCCcCCCCceeeccCCCCCceEEEEEEEeCCCCeEeec
Q 004108 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (773)
Q Consensus 94 ~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~~p~~~~~isn 173 (773)
+|.++|+|.|+|.+++++.|||++.|. +++++|||||++||+||||||||++||+|+|+|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 378999999999999999999999875 67889999999999999999999999999999999999999999
Q ss_pred CccceeeecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHHHHHHHHHHHHHhCC
Q 004108 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 253 (773)
Q Consensus 174 ~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~ 253 (773)
|++.++ ..+++++++|+.++|||+|++||++|+|+.++..+. |+++++|++|+ ++++++++.+++++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 456788999999999999999999999999886554 89999999998 67799999999999999999999
Q ss_pred CCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcCccccchhHHhhhHH
Q 004108 254 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 333 (773)
Q Consensus 254 ~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfA 333 (773)
|||++|+|+|++|+|..|||||||+++|++..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999989998 6677788888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCchhhHHHHHHHHH-hhhhccccCCCCceeeecCCchhhccccccccccchhHHHHHHHHhhCHHHHH
Q 004108 334 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 412 (773)
Q Consensus 334 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~ 412 (773)
+|++++++++.+|+|.++.+|..... .++..|+...+||+..++.++.++...|+.++|.||++|||||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888876654 56888999999999988888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCceeEEEEEeCCEEEEEEEeeecCCCCCCCeeEEEEE
Q 004108 413 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 492 (773)
Q Consensus 413 ~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~~~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl~ 492 (773)
++|+.|+++|+|++++++|||+++++++|.|+++||++|++|+|+|+++|++++++++|+|+||..++ ..+..|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEeCcccceeeEEeecceeEEEecccccccccCCCCCCceEEeccCceeEEEEEcCHHHHHHHHHHHHhcCCChhhhhHH
Q 004108 493 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI 572 (773)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~l 572 (773)
+ +.++. .... +..+ ++.++. + +||++|.++.||||||||+++|..|+++| ..|++.+|+||
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~l 511 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIGL 511 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHHH
Confidence 9 44332 2334 5543 345542 2 69999999999999999999999999988 36899999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhcCCccCC
Q 004108 573 LDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKP 652 (773)
Q Consensus 573 i~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~ 652 (773)
|+|+|+|+++|.++++.+++|+.||++|++|+||.+++..|.++.++ . +.|++|+++++.+++++|| ..
T Consensus 512 i~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~- 580 (780)
T 1z5h_A 512 VDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK- 580 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC-
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC-
Confidence 99999999999999999999999999999999999999999988765 2 2488999999999999999 32
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCC
Q 004108 653 GESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETD 732 (773)
Q Consensus 653 ~~~~~~~~lR~~v~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~ 732 (773)
+++.+..+|..++++||.+|+++|++ |+++|++| ..||||+|.+|||.+++ +|++ |++++++|++++
T Consensus 581 -~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~~~---~g~~--~~~l~~~~~~~~ 647 (780)
T 1z5h_A 581 -QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAYAL---VTGD--LKGLLEKFRSVD 647 (780)
T ss_dssp -CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHHHH---HTCC--HHHHHHHHHSCC
T ss_pred -CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHHHH---cCcH--HHHHHHHHhcCC
Confidence 78899999999999999999999999 99999998 24999999988887554 6775 999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCccc
Q 004108 733 LSQEKTRILSSLASCPDVNIVLEVLNFLLSSEPRCCVWT 771 (773)
Q Consensus 733 ~~~er~~ll~aL~~~~d~~ll~~~L~~~l~~~vr~qD~~ 771 (773)
+++||..++.||||++|+++++++|++++++.||+||..
T Consensus 648 ~~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~ 686 (780)
T 1z5h_A 648 RDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMI 686 (780)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHH
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHH
Confidence 999999999999999999999999999998679999975
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=1.8e-99 Score=897.98 Aligned_cols=707 Identities=18% Similarity=0.241 Sum_probs=569.7
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEecCC
Q 004108 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (773)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (773)
.++|+|...+| ||+|+++++++..+++|+++|++. .+++.|+||+.+ +|++|++++. . ..+..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~--~~~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------A--ADYVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------E--CCCEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------e--cceEeeC
Confidence 66888887666 899999999988888888777643 447889999999 9999998642 1 2333445
Q ss_pred eEEEEEeCCCCCcceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeeccCCcCCCCceeeccCCCCCceEEEEEEE
Q 004108 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (773)
Q Consensus 86 ~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~ 163 (773)
+.++|. +|++|.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 677775 46568999999999864 35678999863 277899999999999999999999999999999
Q ss_pred eCCC-C-eEeecCccceee-ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeec--ccC--CeEEEEEEcCCchhhHHHH
Q 004108 164 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TSD--GIKVRVYCQVGKANQGKFA 236 (773)
Q Consensus 164 ~p~~-~-~~isn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~~~ 236 (773)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|..++.. +.+ ++++++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 899999988764 3577889999999999999999999999988752 222 4899999999999899999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcC
Q 004108 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 316 (773)
Q Consensus 237 l~~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 316 (773)
++.+++++++|+++||+|||++|+++|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887777778889999999999999999
Q ss_pred CcCccccchhHHhhhHHHHHHHHHhhhhCCch-hhHHHHHHHHHhhhhccccCCCCceeeecCCchhhccccccccccch
Q 004108 317 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 395 (773)
Q Consensus 317 lVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 395 (773)
+|||+||+++|||||||+|++..+.....+.. ..+.........++..|+...+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988887776532 111111001112356688888999864 235567788999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCceeEEEEEe--CCE--EEE
Q 004108 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EEK--LEL 471 (773)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~~~v~~~--~~~--~~l 471 (773)
++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|+++ .+. ++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999995 79999999999999985 444 889
Q ss_pred EEEeeecCCCCCCCeeEEEEEEEeCc--ccc-----------eeeEEeecceeEEEecccccccccCCCCCCceEEeccC
Q 004108 472 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 538 (773)
Q Consensus 472 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~ 538 (773)
+|+|+...+..+...|+|||++...+ +.. ...++++.+++++.++.+ ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99998654444455899999997643 221 123567778888888742 123 69999999
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHhcCCChhhhhHH---HHHHHHH-----HHhccC-C-HHHHHHHHHhcc-CCC-chhHH
Q 004108 539 QTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTVL 606 (773)
Q Consensus 539 ~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~E~-~~~~w 606 (773)
..+++||+|+-..+. +...+..+. ++.+|.+. |.|...+ +.+|.. + +..+++++.++. +|+ ++.+|
T Consensus 531 fs~~~~l~~~~~~~~-l~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDD-LLLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFK 608 (867)
T ss_dssp CCSSCEEECCCCHHH-HHHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHH
T ss_pred CCccEEEECCCCHHH-HHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHH
Confidence 999999997654443 223333222 47888777 8888888 667766 7 788999998865 777 99999
Q ss_pred HHHHH--HHHHHHHHHhccChHH----HHHHHH-HHHHH---HHHHHHhc-----C-CccCCCCCHHHHHHHHHHHHHHH
Q 004108 607 SNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTALA 670 (773)
Q Consensus 607 ~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lR~~v~~~ac 670 (773)
..++. .+..|...+..-+|+. .+.+++ +...+ +.++|+++ | |+..+ ++...+.||..+++++|
T Consensus 609 a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l~ 687 (867)
T 2gtq_A 609 ALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFVL 687 (867)
T ss_dssp HHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHHH
Confidence 99998 6777776433223443 233443 44445 78888877 7 88755 77888999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 004108 671 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 750 (773)
Q Consensus 671 ~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d~ 750 (773)
..| ++|++.|.++|.+...+ .+..++.|| +++. ....++++.++.++++|+++....+|..++. ||+++|
T Consensus 688 ~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~---~~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~ 757 (867)
T 2gtq_A 688 RAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNG---NESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRS 757 (867)
T ss_dssp HHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTT---CCSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCST
T ss_pred hcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHh---cCcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCCh
Confidence 999 99999999999976432 333555666 3332 2233567789999999999888889988888 688999
Q ss_pred HHHHHHHHHhcCC
Q 004108 751 NIVLEVLNFLLSS 763 (773)
Q Consensus 751 ~ll~~~L~~~l~~ 763 (773)
+++++++.++.++
T Consensus 758 ~~~~~v~~l~~~~ 770 (867)
T 2gtq_A 758 DTLQQVRTALQHP 770 (867)
T ss_dssp THHHHHHHHTTST
T ss_pred HHHHHHHHHhhCc
Confidence 9999999999997
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=2.3e-91 Score=819.26 Aligned_cols=704 Identities=20% Similarity=0.254 Sum_probs=508.8
Q ss_pred CCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEecCCeEEEE
Q 004108 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (773)
Q Consensus 11 p~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (773)
|..+...||+|++++++++..++|+++|++...++++.|+||+.+|+|.+|++++. .+. ....+..+++.++|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~-~~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLV-EGEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECC-BTTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcC-cccceEecCCEEEE
Confidence 55688899999999999999999999999887666789999999999999999652 111 00024556788999
Q ss_pred EeCCCCCcceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeeccCCcCCCCceeeccCCCCCceEEEEEEEeCCC-
Q 004108 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (773)
Q Consensus 91 ~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i~~p~~- 167 (773)
.++. ++++.++|+|.|+|.. ++.+.|+|++.+ +++|||||++||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~~--------~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSKN--------IIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEETT--------EEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEECC--------eEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8764 6546899999999975 346789998642 678999999999999999999999999999999997
Q ss_pred C-eEeecCccceee-ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeec--cc-C--CeEEEEEEcCCchhhHHHHHHHH
Q 004108 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS-D--GIKVRVYCQVGKANQGKFALNVA 240 (773)
Q Consensus 168 ~-~~isn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~-~--g~~v~v~~~~~~~~~~~~~l~~~ 240 (773)
| +++|||+++++. ..+++++++|+.++|||+||+||+||+|..++.. +. + ++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988764 4677889999999999999999999999988743 22 3 48899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcCc
Q 004108 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (773)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (773)
++++++||++||+|||++|+++|++|+|..||||||||++|++..+|+++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999998877777788899999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhhCCchh-hHHHHHHHHHhhhhccccCCCCceeeecCCchhhccccccccccchhHHH
Q 004108 321 EWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (773)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (773)
+||+|+|||||||+|++.++.....+... ...........++..|+...+||+.. .++.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 99999999999999999888776654321 11111111112356688888899853 2345677889999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcc-------CCCHHHHHHHhhcCCCceeEEEEEeC----C-
Q 004108 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (773)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s-------g~~l~~~~~~W~~~~G~P~~~v~~~~----~- 467 (773)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|++. |++|++|+|+|+++|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999995 6899999999999999763 2
Q ss_pred -EEEEEEEeeecCCCCCCCeeEEEEEEEeCc---ccc---eeeEEeecceeEEEecccccccccCCCCCCceEEeccCce
Q 004108 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS---YDV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (773)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~ 540 (773)
+++|+|+++...+......|.|||++...+ +.. ...+.++.+++++.++.+. .. .+..+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 688889887655555556899999997633 221 2346788889999997531 22 4778999999
Q ss_pred eEEEEEcC--HHHHHHHHHHHHhcCCChhhhhHHHHH--------HHHHHHhcc---------CCH-HHHHHHHHhc-cC
Q 004108 541 GFYRVKYD--KDLAARLGYAIEMKQLSETDRFGILDD--------HFALCMARQ---------QTL-TSLLTLMASY-SE 599 (773)
Q Consensus 541 gyyrv~Yd--~~~w~~l~~~L~~~~~~~~~r~~li~D--------~~~la~~g~---------l~~-~~~l~l~~~l-~~ 599 (773)
+++|++|+ .+.+..|.+. + -++.+|..-..- ...-...|. +.. ..+++.+..+ ..
T Consensus 543 a~v~l~~~~~~~~l~~l~~~---d-~d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 618 (889)
T 3ebh_A 543 APVYIEDQLTDEERILLLKY---D-SDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLED 618 (889)
T ss_dssp SSSEEECCCCHHHHHHHHHH---C-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTC
T ss_pred ceEEEeCCCCHHHHHHHHhh---C-CChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcC
Confidence 99999976 5554444332 1 122333221111 111011121 111 1233333332 21
Q ss_pred C-CchhHHHHHH--HHHHHHHHHHhccChHHHHHHHHHHH--------HHHHHHHHhc------------CCccCCCCCH
Q 004108 600 E-TEYTVLSNLI--TISYKIGRIAADARPELLDYLKQFFI--------SLFQNSAEKL------------GWDSKPGESH 656 (773)
Q Consensus 600 E-~~~~~w~~~~--~~l~~l~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~l------------g~~~~~~~~~ 656 (773)
+ -|...-..++ .....|...+..-+|+.....+++++ ..+..+|+++ .+.. ..+..
T Consensus 619 ~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 697 (889)
T 3ebh_A 619 PHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQM 697 (889)
T ss_dssp TTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHHH
T ss_pred CCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHHH
Confidence 1 1111111110 00111111111111222112222221 2222233332 1221 11233
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHH
Q 004108 657 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 736 (773)
Q Consensus 657 ~~~~lR~~v~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~e 736 (773)
-.+.||..++.++|..+.++..+.|.+.|+. . .---|-+.+.+++.. ...++..+...++++.....-+
T Consensus 698 ~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~--------a-nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~d 766 (889)
T 3ebh_A 698 NMRTLRNTLLSLLSKAQYPNILNEIIEHSKS--------P-YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQ 766 (889)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHTTC--------S-CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHhh--------c-ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhh
Confidence 4589999999999999988777777766642 1 233344444444432 2233456667777766666668
Q ss_pred HHHHHHHhCCCCC-HHHHHHHHH
Q 004108 737 KTRILSSLASCPD-VNIVLEVLN 758 (773)
Q Consensus 737 r~~ll~aL~~~~d-~~ll~~~L~ 758 (773)
|.-.+.|.+...| -+.++++++
T Consensus 767 kwf~~qa~~~~~~~~~~v~~l~~ 789 (889)
T 3ebh_A 767 EWLKTVSRSDRKDIYEILKKLEN 789 (889)
T ss_dssp HHHHHHHTCCCTTHHHHHHHHHH
T ss_pred HhHHHhhCCCCcCHHHHHHHHhc
Confidence 8888888655443 234444443
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=1.4e-90 Score=818.68 Aligned_cols=708 Identities=20% Similarity=0.250 Sum_probs=532.5
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEecC
Q 004108 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEA 84 (773)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (773)
...+|+|...+| ||+|+++++++..+++|+++|++... +++.|+||+.+|+|.+|++++. +.. .++.+
T Consensus 31 ~~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~ 98 (891)
T 3b34_A 31 RHDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEE 98 (891)
T ss_dssp GGGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEE
T ss_pred hhhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEee
Confidence 355777776666 89999999999899999988887654 5678999999999999998652 111 34455
Q ss_pred CeEEEEEeCCCCCcceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeeeccCCcCCCCceeeccCCCCCceEEEEEE
Q 004108 85 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 162 (773)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i~i 162 (773)
++.++|. +++ +.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+|+|
T Consensus 99 ~~~L~I~---~lp-~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI 166 (891)
T 3b34_A 99 EGALVIS---NLP-ERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKI 166 (891)
T ss_dssp TTEEEEC---SCC-SEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEE
T ss_pred CCEEEEE---eCC-CeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEE
Confidence 6788876 343 6899999999864 34568999863 26789999999999999999999999999999
Q ss_pred EeCCC-C-eEeecCccceee-ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeec--ccC--CeEEEEEEcCCchhhHHH
Q 004108 163 DVPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TSD--GIKVRVYCQVGKANQGKF 235 (773)
Q Consensus 163 ~~p~~-~-~~isn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~~--g~~v~v~~~~~~~~~~~~ 235 (773)
++|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|+.++.. +.+ ++++++|++|+..+.+++
T Consensus 167 ~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 246 (891)
T 3b34_A 167 IADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPW 246 (891)
T ss_dssp EEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHH
T ss_pred EeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHH
Confidence 99997 6 899999988764 3577889999999999999999999999988742 223 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhc
Q 004108 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (773)
Q Consensus 236 ~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (773)
+++.+++++++||++||+|||++|+++|++|+|..|||||||+++|++..+++++..++...++.+..+||||+||||||
T Consensus 247 al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFG 326 (891)
T 3b34_A 247 AMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTG 326 (891)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999988777777888999999999999999
Q ss_pred CCcCccccchhHHhhhHHHHHHHHHhhhhCCchhhHHHHHH--HHH-hhhhccccCCCCceeeecCCchhhccccccccc
Q 004108 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD--ECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISY 392 (773)
Q Consensus 316 nlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y 392 (773)
|+|||+||+++|||||||+|++..+.....+... ..+.. ... ..+..|+...+||+.. .++.+++..|+.++|
T Consensus 327 NlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y 402 (891)
T 3b34_A 327 NRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVY 402 (891)
T ss_dssp TTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHH
T ss_pred CCCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccchh
Confidence 9999999999999999999999888877765321 11111 111 2355688888899864 234567788999999
Q ss_pred cchhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCceeEEEEEeC----C-
Q 004108 393 RKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (773)
Q Consensus 393 ~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~~~v~~~~----~- 467 (773)
.||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++++|+|+++|+++. +
T Consensus 403 ~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~ 481 (891)
T 3b34_A 403 EKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQ 481 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTE
T ss_pred hHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCE
Confidence 9999999999999999999999999999999999999999999999999999985 799999999999999752 3
Q ss_pred -EEEEEEEeeecCCCCCCCeeEEEEEEEeCc--ccc----------eeeEEeecceeEEEecccccccccCCCCCCceEE
Q 004108 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIK 534 (773)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 534 (773)
+++|+|+|+...+......|+|||++...+ +.. ...++++.+++++.++.+ ... .|+.
T Consensus 482 ~~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~ 552 (891)
T 3b34_A 482 YTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPA 552 (891)
T ss_dssp EEEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEE
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEE
Confidence 589999997654444456899999997643 221 124678888888888742 123 6999
Q ss_pred eccCceeEEEEEcCHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHh--------cc-CC-HHHHHHHHHh-ccCCC-c
Q 004108 535 LNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMA--------RQ-QT-LTSLLTLMAS-YSEET-E 602 (773)
Q Consensus 535 ~N~~~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~--------g~-l~-~~~~l~l~~~-l~~E~-~ 602 (773)
+|.+..|||||+||..+|+.+.. |.. .-++.+|.+.+.++...... |. +. ...+++.+.. |..+. |
T Consensus 553 l~~~~s~~~~v~~~~~~~~l~~~-l~~-d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 630 (891)
T 3b34_A 553 LLCEFSAPVKLEYKWSDQQLTFL-MRH-ARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKID 630 (891)
T ss_dssp ESTTCCSSCEEECCCCHHHHHHH-HHH-CSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSC
T ss_pred EcCCCcceEEEeCCCCHHHHHHH-Hhh-CCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcC
Confidence 99999999999999988877653 332 34578888888887765442 21 12 2345665554 33322 2
Q ss_pred hhHHHHH--HHHHHHHHHHHhccChHHHHHHHHHHHH--------HHHHHHHhcCCccCC---CCCHHHHHHHHHHHHHH
Q 004108 603 YTVLSNL--ITISYKIGRIAADARPELLDYLKQFFIS--------LFQNSAEKLGWDSKP---GESHLDALLRGEIFTAL 669 (773)
Q Consensus 603 ~~~w~~~--~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~lg~~~~~---~~~~~~~~lR~~v~~~a 669 (773)
...-..+ +.....|...+..-+|+.....++.++. .+..+|+++- ...- .+..-.+.||..++.++
T Consensus 631 ~~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l 709 (891)
T 3b34_A 631 PALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFL 709 (891)
T ss_dssp HHHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2211111 1223344443333334443334444333 3455666653 2111 12234579999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCC
Q 004108 670 ALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPD 749 (773)
Q Consensus 670 c~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d 749 (773)
|..+.++..+.|.+.|++- + + ---|-+.+.+++..-....++..+...++++.....-+|.-.+.|.+ ..
T Consensus 710 ~~~~~~~~~~~~~~~~~~a--~-n-----mtd~~~al~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa~~--~~ 779 (891)
T 3b34_A 710 AFGETHLADVLVSKQFHEA--N-N-----MTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATS--PA 779 (891)
T ss_dssp HTSCHHHHHHHHHHHHHHC--S-S-----HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHHTC--CC
T ss_pred HhCCCchHHHHHHHHHhhC--C-C-----hHHHHHHHHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHhCC--CC
Confidence 9988666777788788752 1 1 11222223333321111345567777888876655567777777754 45
Q ss_pred HHHHHHHHHHhcCC
Q 004108 750 VNIVLEVLNFLLSS 763 (773)
Q Consensus 750 ~~ll~~~L~~~l~~ 763 (773)
++.+.++-.+.-++
T Consensus 780 ~~~~~~v~~l~~h~ 793 (891)
T 3b34_A 780 ANVLETVRGLLQHR 793 (891)
T ss_dssp TTHHHHHHHHTTCT
T ss_pred ccHHHHHHHHhcCC
Confidence 56777766665555
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.1e-84 Score=747.51 Aligned_cols=527 Identities=18% Similarity=0.283 Sum_probs=418.2
Q ss_pred CCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEec--
Q 004108 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE-- 83 (773)
Q Consensus 7 ~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~-- 83 (773)
.+|||..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+.+..+. .++..+..+.
T Consensus 19 ~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~~ 94 (605)
T 3cia_A 19 TYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKRD 94 (605)
T ss_dssp CCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEEC
T ss_pred cccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCcc
Confidence 479999999999999999999999999999999999876 789999999999999998320000 0122333332
Q ss_pred --CCeEEEEEeCCCCCcceEEEEEEEEeeeCCCCcceEEeeec-cCCeeeeeeeccCCcCCCCceeeccCCCCCceEEEE
Q 004108 84 --ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (773)
Q Consensus 84 --~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f~i 160 (773)
.++.+.|.++ ++.++|+|.|+|.++. .|++...+. .+|..+++++|||||++||+||||||+|++||+|++
T Consensus 95 ~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~i 168 (605)
T 3cia_A 95 DVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYTA 168 (605)
T ss_dssp SSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEEE
T ss_pred ccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEEE
Confidence 3567888765 2789999999998654 456543332 357778888999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCccceeeecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHHH
Q 004108 161 TLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (773)
Q Consensus 161 ~i~~p~~~~~isn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~ 240 (773)
+|++|++|+|+|||....+...++ +++|+.++|||+|++||++|+|...+ .|+++++|++|+..+.++++++.+
T Consensus 169 ~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~~ 242 (605)
T 3cia_A 169 RITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDDT 242 (605)
T ss_dssp EEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTTH
T ss_pred EEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHHH
Confidence 999999999999875433322333 68999999999999999999999876 367899999999988899999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccEEEec-CCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcC
Q 004108 241 VKTLELYKEYFAVPYSLPKLDMIAIP-DFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (773)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~k~d~v~~p-~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 319 (773)
.+++++|+++|| |||++|+++|++| +|+.|||||||+ +|.+..++.++. ....+||||+|||||||+||
T Consensus 243 ~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlVT 312 (605)
T 3cia_A 243 QAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLVT 312 (605)
T ss_dssp HHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTEE
T ss_pred HHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhccccc
Confidence 999999999999 9999999999994 999999999998 566665766543 14579999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCchhh--HHHHHHHHH-hhhhcccc-CCCCceeeecCCchhhccccccccccch
Q 004108 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRKG 395 (773)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~-~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 395 (773)
|+||+|+|||||||+|++++++++.+|++.. ...+....+ ..+ +.+ ..+||+..++. ..+++..|+.++|.||
T Consensus 313 ~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KG 389 (605)
T 3cia_A 313 NESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVKG 389 (605)
T ss_dssp ESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHH
T ss_pred cCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhHH
Confidence 9999999999999999999999999887532 111111111 122 444 56788765554 2455778999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC----CHHH-HHHHhhcCCCceeEEEEEeCCEEE
Q 004108 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKLE 470 (773)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~----~l~~-~~~~W~~~~G~P~~~v~~~~~~~~ 470 (773)
++||+||+..+|++.|+++|+.|+++|++++++++|||+++++++|. ++.. +|++|++++|+|+++++.+.+.+.
T Consensus 390 a~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~~ 469 (605)
T 3cia_A 390 QLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAFK 469 (605)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHHH
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHHH
Confidence 99999999999999999999999999999999999999999999885 5665 799999999999987664431000
Q ss_pred EEEEeeecCCCCCCCeeEEEEEEEeCcccceeeEEeecceeEEEecccccccccCCCCCCceEEeccCceeEEEEEcCHH
Q 004108 471 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKD 550 (773)
Q Consensus 471 l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrv~Yd~~ 550 (773)
+ ......-|+.... ....+.|++|+..
T Consensus 470 --~------------------------~~~l~~~w~~~~~---------------------------~~~~~~~~~~~~~ 496 (605)
T 3cia_A 470 --V------------------------IDKQINQLVTDEL---------------------------TLEQLPTAQWTLH 496 (605)
T ss_dssp --H------------------------HHHHTCCTTTTSS---------------------------CCSCSGGGGCCSH
T ss_pred --H------------------------HHHHHHHHHhcCC---------------------------CccccchhhCCHH
Confidence 0 0000001111100 0011238999999
Q ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHH
Q 004108 551 LAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRI 619 (773)
Q Consensus 551 ~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~ 619 (773)
+|..++++|.. .|+ .+|+++|||+|+|+.++. .++.+..++++.++.++.+|..+...|..+.+|
T Consensus 497 ~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n--~ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr~ 561 (605)
T 3cia_A 497 EWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSN--AEIAHAWYLLSVRADYKEVYPAMAKYLKSIGRR 561 (605)
T ss_dssp HHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSS--HHHHHHHHHHHHHHTCGGGHHHHHHHHHHCCCS
T ss_pred HHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCC--HHHHHHHHHHHHhcCChhHHHHHHHHHHHcCCc
Confidence 99999999976 788 999999999999888764 468899999999999999999988877665443
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=1.3e-82 Score=732.98 Aligned_cols=445 Identities=25% Similarity=0.393 Sum_probs=383.8
Q ss_pred CCCCCCCc-eeeEEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEecCcEEeEEEeeeccCCCCccccCeeEE----
Q 004108 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVE---- 80 (773)
Q Consensus 7 ~~rLp~~v-~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~---- 80 (773)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|++++. ...+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~---------~~~~~~~~~ 76 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQ---------EVKYALGER 76 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTE---------ECCEEECCC
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCE---------Ecceecccc
Confidence 45678776 7999999999999999999999999999887 489999999999999998652 11222
Q ss_pred EecCCeEEEEEeCCCCCcc-eEEEEEEEEeeeCCCCcceEEeeec-cCCeeeeeeeccCCcCCCCceeeccCCCCCceEE
Q 004108 81 LVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATF 158 (773)
Q Consensus 81 ~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~f 158 (773)
.+..++.+.|.++.++++| .++|+|.|+|+++.. |++...+. .+|..+++++|||||.+||+||||||+|++||+|
T Consensus 77 ~~~~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf 154 (608)
T 3u9w_A 77 QSYKGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTY 154 (608)
T ss_dssp CGGGCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEE
T ss_pred ccccCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEE
Confidence 2345678999999999999 999999999987654 45444443 3577788899999999999999999999999999
Q ss_pred EEEEEeCCCCeEeecCccceee---ecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHH
Q 004108 159 KITLDVPSELVALSNMPVIDEK---VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKF 235 (773)
Q Consensus 159 ~i~i~~p~~~~~isn~~~~~~~---~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~ 235 (773)
+++|++|++++|+|||++.++. .++++++++|..++|||+||+||+||+|+..+ .|+++++|++|+..+.+.+
T Consensus 155 ~i~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~ 230 (608)
T 3u9w_A 155 TAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAY 230 (608)
T ss_dssp EEEEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHH
T ss_pred EEEeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHH
Confidence 9999999999999999887653 24568899999999999999999999998765 3577899999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHh
Q 004108 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (773)
Q Consensus 236 ~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~-p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (773)
+++.+.+++++||++|| |||++++++|++ |+|+.||||||||+++++..++.+.. +..+||||+|||||
T Consensus 231 ~~~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWf 300 (608)
T 3u9w_A 231 EFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWT 300 (608)
T ss_dssp HTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTB
T ss_pred HHHHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhh
Confidence 99999999999999999 999999999888 79999999999999999996655443 45689999999999
Q ss_pred cCCcCccccchhHHhhhHHHHHHHHHhhhhCCchhhHHHHHHHHH-hhhhccccCCCCceeeecCCchhh--cccccccc
Q 004108 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAIS 391 (773)
Q Consensus 315 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~--~~~f~~i~ 391 (773)
||+||++||+|+|||||||+|++++++++.+|++.....+..... .....|....+||+..++.+..++ +..|+.++
T Consensus 301 GnlVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~ 380 (608)
T 3u9w_A 301 GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVP 380 (608)
T ss_dssp TTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHH
T ss_pred cCcCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHH
Confidence 999999999999999999999999999999998766555544333 234457777889988777665544 45799999
Q ss_pred ccchhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHH----HHHhhcCCCceeEEEEEeC
Q 004108 392 YRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE 466 (773)
Q Consensus 392 Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~----~~~W~~~~G~P~~~v~~~~ 466 (773)
|.||+++||||+..|| ++.|+++||.|+++|+|++++++|||+++++++|.+++.+ |++|++++|+|+++|+++.
T Consensus 381 Y~KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~ 460 (608)
T 3u9w_A 381 YEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDM 460 (608)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCC
T ss_pred HhHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeecc
Confidence 9999999999999998 7889999999999999999999999999999999999888 9999999999999998765
Q ss_pred ----CEEEEEEEee
Q 004108 467 ----EKLELEQSQF 476 (773)
Q Consensus 467 ----~~~~l~Q~rf 476 (773)
..+.++|+++
T Consensus 461 ~~~~~~~~l~q~~~ 474 (608)
T 3u9w_A 461 TLTNACIALSQRWI 474 (608)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred ccccceeeHHhHHh
Confidence 2456666443
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=1.2e-81 Score=726.39 Aligned_cols=529 Identities=18% Similarity=0.288 Sum_probs=410.1
Q ss_pred CCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcC----CCEEEEEecCcEEeEEEeeeccCCCCccccCeeEEEe
Q 004108 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELV 82 (773)
Q Consensus 7 ~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~ 82 (773)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++.+.++ ++.|+||+++|+|++|++++. ...+..+
T Consensus 21 ~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~~ 91 (632)
T 2xq0_A 21 TLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQIE 91 (632)
T ss_dssp CCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEEC
T ss_pred cccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEEc
Confidence 479999999999999999999999999999999999877 899999999999999998541 2233333
Q ss_pred c----CCeEEEEEeCCCCCcceEEEEEEEEeeeCCCCcceEEeee-ccCCeeeeeeeccCCcCCCCceeeccCCCCCceE
Q 004108 83 E----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKAT 157 (773)
Q Consensus 83 ~----~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~t~~ep~~Ar~~fPc~Dep~~ka~ 157 (773)
. .++.+.|.++++ .+.++|+|.|+|+++.. |++.... ..+|. +++++|||||.+||+||||||+|++||+
T Consensus 92 ~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Kat 166 (632)
T 2xq0_A 92 QRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKST 166 (632)
T ss_dssp CCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCEE
T ss_pred ccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccceE
Confidence 2 357889998776 33999999999987653 4443222 23455 7888999999999999999999999999
Q ss_pred EEEEEEeCCCCeEeecCccceeeecCCeEEEEEEeCCCccceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHH
Q 004108 158 FKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFAL 237 (773)
Q Consensus 158 f~i~i~~p~~~~~isn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l 237 (773)
|+++|++| +.|++||..+.+...++ .+++|+.++|||+|++||+||+|...+. |+++++|++|+..+.+++++
T Consensus 167 f~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~~ 239 (632)
T 2xq0_A 167 FTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWEF 239 (632)
T ss_dssp EEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHHH
T ss_pred EEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHHH
Confidence 99999999 98886664433322122 2789999999999999999999998762 56799999999888888999
Q ss_pred H-HHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhc
Q 004108 238 N-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (773)
Q Consensus 238 ~-~~~~~l~~~e~~fg~~yP~~k~d~v~~-p~~~~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (773)
+ .+.+++++|+++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ....+||||+||||||
T Consensus 240 ~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWfG 309 (632)
T 2xq0_A 240 ENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWSG 309 (632)
T ss_dssp TTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTBT
T ss_pred HHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHhc
Confidence 8 99999999999999 999999999999 59999999999985 55554665543 1457999999999999
Q ss_pred CCcCccccchhHHhhhHHHHHHHHHhhhhCCchhh--HHHHHHHHH-hhhhccccCCCCc---eeeecCCchhhcccccc
Q 004108 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFDA 389 (773)
Q Consensus 316 nlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---i~~~~~~~~~~~~~f~~ 389 (773)
|+||++||+|+|||||||+|++++++++.+|++.. ...+..+.. .++ |++..+|| +...+.++.+++..|+.
T Consensus 310 nlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~pl~~l~~~~~~~~~~~~~f~~ 387 (632)
T 2xq0_A 310 NLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSI--DSMKDPERFSTLVQNLNDNTDPDDAFST 387 (632)
T ss_dssp TTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HTCSSHHHHTSSSCCCCSSSCGGGGCSS
T ss_pred CCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HhcccCCCCcccccCCCCCCChHHhccc
Confidence 99999999999999999999999999999988642 211111111 222 45556678 33344334566778999
Q ss_pred ccccchhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCCHHHHHHHHHhccC---CCHHH-HHHHhhcCCCceeEEEEE
Q 004108 390 ISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVKV 464 (773)
Q Consensus 390 i~Y~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg---~~l~~-~~~~W~~~~G~P~~~v~~ 464 (773)
++|.||+++|+||+..||+ +.|+++|+.|+++|+|++++++|||+++++++| .+++. +|++|++++|+|+ +++.
T Consensus 388 i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~~ 466 (632)
T 2xq0_A 388 VPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPHF 466 (632)
T ss_dssp HHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCCC
T ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcCC
Confidence 9999999999999999999 999999999999999999999999999999987 46776 7999999999999 6654
Q ss_pred eCCE----EEEEEEeeecCCCCCCCeeEEEEEEEeCcccceeeEEeecceeEEEecccccccccCCCCCCceEEeccCce
Q 004108 465 KEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (773)
Q Consensus 465 ~~~~----~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~ 540 (773)
+.+. ..+.| .|....+ . .... .. . + . .++. . ++ .
T Consensus 467 ~~~~~~~~~~l~~------------~w~~~~~--~-~~~~-~~--~--~-~--~~~~----------~--d~-----~-- 504 (632)
T 2xq0_A 467 ITALADNVYQLAD------------KWVEMAQ--H-LKTT-ED--F--R-S--EFNA----------I--DI-----K-- 504 (632)
T ss_dssp CCHHHHHHHHHHH------------HHHHHTT--T-CCSH-HH--H--H-H--HCCG----------G--GG-----T--
T ss_pred CchHHHHHHHHHH------------HHHhccc--c-cccc-cc--c--c-c--CCCH----------H--HH-----h--
Confidence 3310 01111 1211000 0 0000 00 0 0 0 0110 1 11 1
Q ss_pred eEEEEEcCHHHHHHHHHHHHhc------------CCChhhhhHHHHHHHH--HHHhccCCHHHHHHHHHhccCCCchhHH
Q 004108 541 GFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEYTVL 606 (773)
Q Consensus 541 gyyrv~Yd~~~w~~l~~~L~~~------------~~~~~~r~~li~D~~~--la~~g~l~~~~~l~l~~~l~~E~~~~~w 606 (773)
+|+...|..+++.|..+ .++ .+|+++|+|+|+ |+.++ +.++.+..++++.++....+|
T Consensus 505 -----~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~--n~ei~~~~~~~~~~~~~~~~~ 576 (632)
T 2xq0_A 505 -----DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQ--NAEVVFKMFKFQIFAKLQEEY 576 (632)
T ss_dssp -----TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCC--CHHHHHHHHHHHHHTTCGGGH
T ss_pred -----hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCc--CHHHHHHHHHHHHhcCChhHH
Confidence 78899999999998742 366 899999999998 65554 458899999999899999999
Q ss_pred HHHHHHHHHHHHH
Q 004108 607 SNLITISYKIGRI 619 (773)
Q Consensus 607 ~~~~~~l~~l~~~ 619 (773)
..+...|..+.+|
T Consensus 577 ~~~~~~l~~~gr~ 589 (632)
T 2xq0_A 577 KHLADWLGTVGRM 589 (632)
T ss_dssp HHHHHHTTTCCCH
T ss_pred HHHHHHHHHcCCe
Confidence 9988776655444
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-57 Score=498.95 Aligned_cols=299 Identities=21% Similarity=0.348 Sum_probs=264.7
Q ss_pred CceeEEEEEeCCEEEEEEEeeecCCCC---CCCeeEEEEEEEeCcccceeeEEeecceeEEEecccccccccCCCCCCce
Q 004108 456 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (773)
Q Consensus 456 G~P~~~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (773)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++. ++ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999986542 23589999999987655445678877766666542 34 79
Q ss_pred EEeccCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCCchhHHHHHH
Q 004108 533 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (773)
Q Consensus 533 i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~ 610 (773)
|++|++++||||||||+++|.+|+++|..+ .||+.||||||+|+|+||++|.++|+.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hHHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 004108 611 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 689 (773)
Q Consensus 611 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~g~~~c~~~a~~~f~~~~ 689 (773)
..|.+|.+++...+ ++.++.|++|+++++.|+++++||++ ++++.+.++|..++++||.+|+++|+++|+++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 56789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCC-CCCC
Q 004108 690 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-PRCC 768 (773)
Q Consensus 690 ~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~~ll~aL~~~~d~~ll~~~L~~~l~~~-vr~q 768 (773)
+++....||||+|.+|||++++ + +++|+++|++|+++++++||..++.||||++||++++++|++++++. ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~~---~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGAQ---S--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHTT---S--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeeeC---C--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 8744446999999999987654 3 88999999999999999999999999999999999999999999886 7999
Q ss_pred cccc
Q 004108 769 VWTC 772 (773)
Q Consensus 769 D~~~ 772 (773)
|+..
T Consensus 303 D~~~ 306 (419)
T 3rjo_A 303 EFPQ 306 (419)
T ss_dssp GHHH
T ss_pred HHHH
Confidence 9653
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.96 E-value=1.5e-28 Score=279.35 Aligned_cols=298 Identities=14% Similarity=0.151 Sum_probs=202.0
Q ss_pred CceEEEEEEEeCCC---CeEeecCccceeeecCCeEEEEEEeCC---CccceEEEEEEeeeeEeeecccCCeEEEEEEcC
Q 004108 154 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTVSYQESP---IMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 227 (773)
Q Consensus 154 ~ka~f~i~i~~p~~---~~~isn~~~~~~~~~~~~~~~~f~~t~---~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~ 227 (773)
-..+++++|..|++ |.+.+.++...... .+.. .|.... .+.+ -+.+|+|...+. +..|+++++...+
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~-~~~~--~f~a~~yd~LvDs---Pv~~G~~~~~~~-~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQP-HSWG--CFRADNYDALIDY---PFLIGDLTIEEF-IAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCT-TSSE--EEEESSHHHHTTC---CEEEESCEEEEE-EETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCC-Ccce--EEEcCCHHHHhcc---hhcccCcEEEEe-ccCCeEEEEEEEc
Confidence 34678999999999 99988887654311 1222 233221 0111 146789987663 4568888875554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccce--eeecccccccCCCChhHHHHHHHHH
Q 004108 228 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAANKQRVATV 304 (773)
Q Consensus 228 ~~~~~~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~-p~~~~gamE~~gli--~~~e~~ll~~~~~~~~~~~~~~~~~ 304 (773)
......+.++..+++++++++++|| |||+++++++.. ++...|||||.+.. ++++..+.......+.........+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4334567888899999999999999 999999999864 45688999998864 4565533222221233455667899
Q ss_pred HHHHHHHHHhcCCcCcc-----------ccchhHHhhhHHHHHHHHHhhhhCC-chhhHHHHHHHHHhhhhccccCCCCc
Q 004108 305 VAHELAHQWFGNLVTME-----------WWTHLWLNEGFATWVSYLAADSLFP-EWKIWTQFLDECTEGLRLDGLAESHP 372 (773)
Q Consensus 305 iaHElaHqWfGnlVt~~-----------~w~d~WL~EGfA~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~p 372 (773)
++||++||||||.|+++ ||+++||+||||+|++.++..+.-. ..+.+...+......+........+|
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~l~~~i~~~~~~~gr~~~s 350 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKLLGDTLSRVERGAGQYQQS 350 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSGGGGTCC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhhcCCCccccC
Confidence 99999999999888764 5699999999999999988765421 11111111222222222111122223
Q ss_pred eeeec-------CCchhhccccccccccchhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCCHHHHHHHHHh
Q 004108 373 IEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALEE 438 (773)
Q Consensus 373 i~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~~ 438 (773)
+.... ..+++....+....|.||+++++||+..|++ +.|+++||.|+++|.. ++++++||.+++++
T Consensus 351 l~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e~ 430 (597)
T 4fgm_A 351 VTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLNQ 430 (597)
T ss_dssp HHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHHT
T ss_pred hHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHH
Confidence 32110 0001111112234699999999999888865 4899999999999874 68999999999999
Q ss_pred ccCCCHHHHHHHhhcCCCcee
Q 004108 439 GSGEPVNKLMNSWTKQKGYPV 459 (773)
Q Consensus 439 ~sg~~l~~~~~~W~~~~G~P~ 459 (773)
++|.++++||++|+++++.|-
T Consensus 431 ~sG~dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 431 YPGIDISDFLKDALYNKESLS 451 (597)
T ss_dssp STTCCCHHHHHHHHHSCSCCC
T ss_pred hcCcCHHHHHHHHHhCCCCcc
Confidence 999999999999999998753
No 13
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=84.99 E-value=2.7 Score=42.59 Aligned_cols=106 Identities=23% Similarity=0.317 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCC-cccccccceeeecccccccCCCChh-HHHHHHHHHHHHHH
Q 004108 234 KFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-GAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHEL 309 (773)
Q Consensus 234 ~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~v~~p~~~~-gamE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHEl 309 (773)
..|...+.++.+||.+.|| .-++.. ..++..=.+.. ++-.++.-..+..+.+.|....... .....-..+++||+
T Consensus 68 vdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NAfWdg~~m~fGdGdg~~f~~~~~~lDVv~HE~ 146 (301)
T 1bqb_A 68 VDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHEI 146 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCcEEcCCEEEEEcCCCcccCCcccccceeeeec
Confidence 3566678899999999999 566653 33333222211 1001111122222334443321000 00001347899999
Q ss_pred HHHHhcCCcCccccchhH-HhhhHHHHHHHHH
Q 004108 310 AHQWFGNLVTMEWWTHLW-LNEGFATWVSYLA 340 (773)
Q Consensus 310 aHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~ 340 (773)
+|--.-....+..-.+-. |||||+.++....
T Consensus 147 tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 147 THGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 997766554444433333 8999999999753
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=83.01 E-value=42 Score=33.85 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCccccc--c--cceeeecccccccCCCChhHHHHHHHHHHHHH
Q 004108 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 308 (773)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~gamE~--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 308 (773)
+..|.-.+.++.+||.+.|| .-++. ..++..-.+. ...+| | ..++|....-.+.+ . .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id-~~l~~~Vhyg-~~y~NAfWdG~~M~fGDG~~~~~p----~----~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLT-HKLYMKVHYG-RSVENAYWDGTAMLFGDGATMFYP----L----VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEESCT-TTCCCEEECSSCEEECCCCSSBSC----S----CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCC-CceEEEEecC-CCccCcEecCcEEEeeCCCccccc----c----cccceeeec
Confidence 34555677899999999999 66765 2444433332 12233 3 12333332111111 1 135789999
Q ss_pred HHHHHhcCCcCccccchhH-HhhhHHHHHHHHHh
Q 004108 309 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 341 (773)
Q Consensus 309 laHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~~ 341 (773)
++|--......+....+-- |||||+..+...+-
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 9999887766655555544 89999999986643
No 15
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=80.54 E-value=2.7 Score=42.75 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCCcccccccceeeecccccccCCCChh-HHHHHHHHHHHHH
Q 004108 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 308 (773)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 308 (773)
.+..|...+..+.+||.+.|| .-++.. +.++..=.+. ...+| ..+..+.|.|....... ........+++||
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg-~~y~N---AfW~g~~m~fGDGdg~~f~~~~~slDVv~HE 143 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYS-QGYNN---AFWNGSQMVYGDGDGQTFIPLSGGIDVVAHE 143 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCT-TTCCC---EEECSSCEEECCCCSSSBSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecC-CCccC---ceEcCCEEEEeCCCCcccccccccccceeee
Confidence 345677788999999999999 566642 3444332221 11222 22222233333321000 0000134789999
Q ss_pred HHHHHhcCCcCccccchh-HHhhhHHHHHHHHHh
Q 004108 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (773)
Q Consensus 309 laHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 341 (773)
+.|--.........-.+. =|||+|+..+...+-
T Consensus 144 ~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 144 LTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999776554433333333 389999999986654
No 16
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=78.68 E-value=3.2 Score=41.91 Aligned_cols=109 Identities=24% Similarity=0.274 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCC---Ccccccccceeeeccc-ccccCCCChhHHHHHHHHHH
Q 004108 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (773)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~v~~p~~~---~gamE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (773)
.+..|...+.++.+||.+.|| .-++.. +.++..-.+. ..|.=+....+|.+-. ..+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAF-------SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCG-------GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCcccccc-------ccccchh
Confidence 345567788999999999999 566642 3333321110 1222222344444421 111111 0134789
Q ss_pred HHHHHHHHhcCCcCccccchh-HHhhhHHHHHHHHHhhhhCCchhhH
Q 004108 306 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAADSLFPEWKIW 351 (773)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~~~~~~~~~~~ 351 (773)
+|||.|--.........-.+- =|||+|+..+...+- .++|.+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWliG 177 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLVG 177 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEES
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCceec
Confidence 999999766554333332222 389999999997765 3455443
No 17
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.21 E-value=1.6 Score=36.89 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEecCCCCc--cccc---ccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 004108 239 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAG--AMEN---YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (773)
Q Consensus 239 ~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~~g--amE~---~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (773)
...++++-+.+..|++. ++ +..+++-... ++.. -+.|.+... |+-. . ....+..++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~--v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~~-----l-~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PT--VAIYDSADINAFATGAKRDDSLVAVSTG-LLHN-----M-TRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CE--EEEECCSSEEEEEECCC--CCEEEEEHH-HHHH-----S-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--Ce--EEEEECCCcCEEEEecCCCCCEEEEcHH-HHhh-----C-CHHHHHHHHHHHHHHHH
Confidence 34555566667778653 34 3344432212 2221 133554443 3211 1 23468999999999976
Q ss_pred hcC
Q 004108 314 FGN 316 (773)
Q Consensus 314 fGn 316 (773)
-++
T Consensus 96 ~~h 98 (107)
T 3cqb_A 96 NGD 98 (107)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 18
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=76.93 E-value=4.3 Score=41.79 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCCcccccccceeeecccccccCCCChh-HHHHHHHHHHHHHH
Q 004108 233 GKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHEL 309 (773)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~v~~p~~~~gamE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHEl 309 (773)
+..+...+.++.+||.+.|| .-++.. ..++..-.+. ...+| ..+..+.+.|....... .....-..+++||+
T Consensus 90 v~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg-~~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HEl 164 (341)
T 2vqx_A 90 VDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYG-KEYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHAL 164 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCS-SSCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecC-CCccC---ceecCcEeEeeCCCCcccCCcccchhhhhhhc
Confidence 45566678889999999999 445542 3344332221 12222 11222233332221000 00001247899999
Q ss_pred HHHHhcCCcCccccchhH-HhhhHHHHHHHHHh
Q 004108 310 AHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 341 (773)
Q Consensus 310 aHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~~ 341 (773)
+|--......+..-.+-- |||||+.++...+-
T Consensus 165 tHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 165 AHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 998776554444433433 99999999987654
No 19
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=73.41 E-value=1.3 Score=50.96 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcCCcCccccc---------hhHHhhhHHHHHHHH
Q 004108 301 VATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 339 (773)
Q Consensus 301 ~~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfA~y~~~~ 339 (773)
+.+++.||++|.-=|-..-+..|. -.|+.||||+||+..
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 455789999999855333333333 579999999999754
No 20
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=69.58 E-value=14 Score=44.93 Aligned_cols=194 Identities=15% Similarity=0.103 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHhccCCHHHHHHHHHh-cc---CCCchhHHHHHHHHHHHHHHHHhccCh
Q 004108 550 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS-YS---EETEYTVLSNLITISYKIGRIAADARP 625 (773)
Q Consensus 550 ~~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~-l~---~E~~~~~w~~~~~~l~~l~~~~~~~~~ 625 (773)
.....|.+.+..++++..+-++++.-+.+.. . +-...++.+.- +. ...+..+|.+++-.+..+-+.+....+
T Consensus 356 ~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~---~-Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~ 431 (1056)
T 1lsh_A 356 EALLFLKRTLASEQLTSAEATQIVASTLSNQ---Q-ATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTV 431 (1056)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC---C-CCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhccC---C-CCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 3455666667677888877777776444332 2 33334443332 22 235677888888888776665532211
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCC--CCCCCCchhhh
Q 004108 626 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLPPDIRK 703 (773)
Q Consensus 626 ~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~g~~~c~~~a~~~f~~~~~~~--~~~~i~~dlr~ 703 (773)
.+...+...+.+++...+++ + + ..-+...+..+...|++..+. .+..++.+. .....+..+|.
T Consensus 432 ~c~~~~v~~i~~~l~~~~~~-------~-~---~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~~rvr~ 496 (1056)
T 1lsh_A 432 SCPDELLQPLHDLLSQSSDR-------A-K---EEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYSTRVQA 496 (1056)
T ss_dssp SCCGGGTHHHHHHHHHHHHT-------T-C---HHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc-------C-C---hHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccchHHHH
Confidence 11111112222222222221 1 1 233456677778888876544 334444331 11234555664
Q ss_pred hhhheeeecccCCCHHHHHHHHHHHHcCC-CHHHHHHHHHHh-CCCCCHHHHHHHHHHhcC
Q 004108 704 AAYVAVMQKVSASDRSGYESLLRVYRETD-LSQEKTRILSSL-ASCPDVNIVLEVLNFLLS 762 (773)
Q Consensus 704 ~vy~~~~~~~~~g~~~~~~~l~~~y~~s~-~~~er~~ll~aL-~~~~d~~ll~~~L~~~l~ 762 (773)
++..++.+....-....-+.++..|.+.. +++-|..++..| -|.++...++++.+.+..
T Consensus 497 aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~ 557 (1056)
T 1lsh_A 497 EAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRR 557 (1056)
T ss_dssp HHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhh
Confidence 33333332222112335667778887554 444555544433 366777888877777654
No 21
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=49.90 E-value=1.4e+02 Score=28.82 Aligned_cols=132 Identities=11% Similarity=0.159 Sum_probs=82.1
Q ss_pred ChhhhhHHHHHHHH-HHHh--c----cCCHHHHHHHH-HhccCCCchhHHHHHHHHHHHHHHHHhccChHHHHHHH-HHH
Q 004108 565 SETDRFGILDDHFA-LCMA--R----QQTLTSLLTLM-ASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFF 635 (773)
Q Consensus 565 ~~~~r~~li~D~~~-la~~--g----~l~~~~~l~l~-~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~ 635 (773)
.-.+|..-+..+.. ++.. . ..+|..+++.+ +.|.++.+..+-..+.+.+..|.+-+.. ..|. .|.
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~ 102 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYV 102 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHH
Confidence 35677777777777 6642 1 34567777754 4466899999989999998888765531 2476 899
Q ss_pred HHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhc------C-CHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhhe
Q 004108 636 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL------G-HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVA 708 (773)
Q Consensus 636 ~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~------g-~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~ 708 (773)
..++.+++++++-.. .......+..+..++... + .+.|++... ..+.+ + .+..|..+...
T Consensus 103 ~~llp~ll~~l~dkk----~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~----~~l~~----k-~~~vk~~al~~ 169 (249)
T 2qk1_A 103 SLVFTPLLDRTKEKK----PSVIEAIRKALLTICKYYDPLASSGRNEDMLKDIL----EHMKH----K-TPQIRMECTQL 169 (249)
T ss_dssp HHHHHHHHHGGGCCC----HHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHH----HHTTC----S-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHH----HHHcC----C-ChHHHHHHHHH
Confidence 999999999996221 223345555555555555 3 445555432 34433 1 35777765555
Q ss_pred eeecccC
Q 004108 709 VMQKVSA 715 (773)
Q Consensus 709 ~~~~~~~ 715 (773)
+.+.+..
T Consensus 170 l~~~~~~ 176 (249)
T 2qk1_A 170 FNASMKE 176 (249)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 22
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=42.12 E-value=9.3 Score=33.37 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=23.6
Q ss_pred ceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCCcCccccc
Q 004108 278 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWT 324 (773)
Q Consensus 278 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~ 324 (773)
+++|+...+-+-. +...-...+..++.||+||.. |.|...+.|+
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHhf-e~lag~~gls 111 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHHL-ESLAGRDDLV 111 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHHH-HHHHTTC---
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHHH-HhhcccCCCC
Confidence 4556655222222 222344558999999999986 4444444443
No 23
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=40.72 E-value=1.7e+02 Score=24.91 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=19.7
Q ss_pred EEEEEeCCCCCcceEEEEEEEEeeeC
Q 004108 87 ILVLEFAETLPTGMGVLAIGFEGVLN 112 (773)
Q Consensus 87 ~l~i~l~~~l~~g~~~l~i~y~g~~~ 112 (773)
...+.++.++.||.|+|+..+.|+..
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEET
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeec
Confidence 34456666788899999999998764
No 24
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=38.70 E-value=3.1e+02 Score=27.43 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCC---CcccccccceeeecccccccCCCChhHHHHHHHHHHHHHH
Q 004108 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (773)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~v~~p~~~---~gamE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (773)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.=+...++|.+..-.+.+- ....+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~--------~slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL--------VSLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS--------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc--------cccchhhhhh
Confidence 44555677889999999999 56665 3444332221 1222222344444432111111 1357899999
Q ss_pred HHHHhcCCcCcccc-chhHHhhhHHHHHHHHHh
Q 004108 310 AHQWFGNLVTMEWW-THLWLNEGFATWVSYLAA 341 (773)
Q Consensus 310 aHqWfGnlVt~~~w-~d~WL~EGfA~y~~~~~~ 341 (773)
.|--....-.+..- ..-=|||||+..+...+.
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 99877654333221 223489999999986543
No 25
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=35.85 E-value=45 Score=32.71 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 004108 298 KQRVATVVAHELAHQWFGN 316 (773)
Q Consensus 298 ~~~~~~~iaHElaHqWfGn 316 (773)
...++.+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 3468999999999976554
No 26
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=35.41 E-value=29 Score=33.17 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999996
No 27
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=31.08 E-value=57 Score=30.64 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36789999999995
No 28
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=30.71 E-value=53 Score=30.74 Aligned_cols=13 Identities=54% Similarity=0.774 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHH
Q 004108 301 VATVVAHELAHQW 313 (773)
Q Consensus 301 ~~~~iaHElaHqW 313 (773)
.+.++||||+|++
T Consensus 133 ~a~~~AHElGH~l 145 (197)
T 1bud_A 133 VAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhc
Confidence 6789999999996
No 29
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=30.34 E-value=50 Score=31.05 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 004108 301 VATVVAHELAHQW 313 (773)
Q Consensus 301 ~~~~iaHElaHqW 313 (773)
.+.++||||+|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 30
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=28.93 E-value=1.5e+02 Score=27.90 Aligned_cols=20 Identities=30% Similarity=0.420 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 004108 294 AAANKQRVATVVAHELAHQW 313 (773)
Q Consensus 294 ~~~~~~~~~~~iaHElaHqW 313 (773)
......++..+++||+.|.+
T Consensus 136 ~~l~~~Rv~k~~~HElGH~l 155 (210)
T 3lmc_A 136 DSALIDRIVKEGAHEIGHLF 155 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 33456678999999999986
No 31
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=28.29 E-value=3.7e+02 Score=25.77 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCCchhhhhhhheeeecccCCCHHHHHHHHHHHHcCCCHHHHH
Q 004108 659 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 738 (773)
Q Consensus 659 ~~lR~~v~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~er~ 738 (773)
...|..++..++..|.+..+... .+.+.+ -+++.|..+..++.. +...+....+.+.+... ..++.-|.
T Consensus 142 ~~vR~~a~~aL~~~~~~~~~~~L----~~~l~d-----~~~~vr~~a~~aL~~-~~~~~~~~~~~L~~~l~-d~~~~vR~ 210 (280)
T 1oyz_A 142 TNVRRATAFAISVINDKATIPLL----INLLKD-----PNGDVRNWAAFAINI-NKYDNSDIRDCFVEMLQ-DKNEEVRI 210 (280)
T ss_dssp HHHHHHHHHHHHTC---CCHHHH----HHHHTC-----SSHHHHHHHHHHHHH-HTCCCHHHHHHHHHHTT-CSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHH----HHHHcC-----CCHHHHHHHHHHHHh-hccCcHHHHHHHHHHhc-CCCHHHHH
Confidence 35566666666777665433332 233333 235566544333322 11225555666666543 34566677
Q ss_pred HHHHHhCCCCCHHHHHHHHHHhcCCCCC
Q 004108 739 RILSSLASCPDVNIVLEVLNFLLSSEPR 766 (773)
Q Consensus 739 ~ll~aL~~~~d~~ll~~~L~~~l~~~vr 766 (773)
..+.+|+...++..+..++..+-++.||
T Consensus 211 ~A~~aL~~~~~~~~~~~L~~~l~d~~vr 238 (280)
T 1oyz_A 211 EAIIGLSYRKDKRVLSVLCDELKKNTVY 238 (280)
T ss_dssp HHHHHHHHTTCGGGHHHHHHHHTSSSCC
T ss_pred HHHHHHHHhCCHhhHHHHHHHhcCccHH
Confidence 7777777777777776666655444343
No 32
>3s51_A Protein FACI, fanconi anemia group I protein homolog; DNA repair, DNA binding protein; 3.30A {Mus musculus} PDB: 3s4z_A* 3s4w_A
Probab=28.25 E-value=1.1e+02 Score=37.09 Aligned_cols=139 Identities=9% Similarity=-0.018 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHhcCCC-----hhhhhHHHHHHHHHHHhccCCHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHhc
Q 004108 548 DKDLAARLGYAIEMKQLS-----ETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAAD 622 (773)
Q Consensus 548 d~~~w~~l~~~L~~~~~~-----~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~ 622 (773)
+...|..|.+.+-.+.-. ..-|..+.--...+...|.++.+.+.+++..|-.|-+..|=.......+...+.++.
T Consensus 39 ~~~~~~~ll~~i~~~~~~s~~~~~~~r~~v~~~~~~~l~~~~l~~~~~~dii~~L~~el~~lp~~~Lv~l~~~~v~~ir~ 118 (1308)
T 3s51_A 39 KGRAVGTLLRAVLKGSPCSEEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVRE 118 (1308)
T ss_dssp CHHHHHTHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHS
T ss_pred CCccHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHc
Confidence 345677777776543222 345778888889999999999999999999999998888877777777766666654
Q ss_pred cChHHHHHHHHHHHHHHHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHH
Q 004108 623 ARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGH-KETLNEASKRFHA 687 (773)
Q Consensus 623 ~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lR~~v~~~ac~~g~-~~c~~~a~~~f~~ 687 (773)
.++.. ..+.+.+-..+..+.++-+.-...++...-...+..+++-.|...= +.++-....+|++
T Consensus 119 g~~~~-~~wldLLP~~Ls~L~~~~~~i~~g~~e~sG~Eyk~~iI~~Lcs~~W~~~~li~l~~mFrD 183 (1308)
T 3s51_A 119 DRLVN-GKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQLTSVFKD 183 (1308)
T ss_dssp CCCSC-STTTTHHHHHHHHHHTCCSCCSSSSCCCCHHHHHHHHHHHHHHSCCCTTTHHHHHHHGGG
T ss_pred CCccc-CcHHHHHHHHHHHHHcccchhhcCCCccchHHHHHHHHHHHHhcCCcHHHHHHHHHHHHc
Confidence 32221 2233333333333332211111111222345778888888888753 3555555556654
No 33
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=28.20 E-value=64 Score=34.42 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 34
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=23.84 E-value=1.1e+02 Score=33.69 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=32.7
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcee
Q 004108 406 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 459 (773)
Q Consensus 406 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~ 459 (773)
+.++.-..-+.+|+.. |+.+.....++.+..++..|.|++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777641 11122233455566666678889888877777776664
No 35
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=23.76 E-value=51 Score=31.00 Aligned_cols=13 Identities=38% Similarity=0.672 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 004108 301 VATVVAHELAHQW 313 (773)
Q Consensus 301 ~~~~iaHElaHqW 313 (773)
.+.++||||+|.+
T Consensus 136 ~a~~~AHElGHnl 148 (202)
T 1atl_A 136 MGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eEEEehhhhcccc
Confidence 6789999999995
No 36
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=22.87 E-value=55 Score=30.62 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 004108 301 VATVVAHELAHQW 313 (773)
Q Consensus 301 ~~~~iaHElaHqW 313 (773)
.+.++||||+|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 37
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=22.43 E-value=52 Score=27.88 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=21.6
Q ss_pred cceeeecccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 004108 277 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (773)
Q Consensus 277 gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (773)
-+++||...+-. -.+...-...+..++.||+||..
T Consensus 68 rI~lYR~Pi~~~--~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 68 RIIIYRNTICAL--CETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEHHHHHHT--CSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEehHHHHHH--hCChhHHHHHHHHHHHHHHHHHc
Confidence 356666652221 12333445568899999999985
No 38
>4fca_A Conserved domain protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 2.06A {Bacillus anthracis}
Probab=22.34 E-value=63 Score=35.41 Aligned_cols=56 Identities=11% Similarity=0.166 Sum_probs=37.7
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHh--ccCCC---CHHHHHHHHHhccCCCHHHHHHHh
Q 004108 396 ASVIRMLQNYLGAECFQRSLASYIKKY--ACSNA---KTEDLWAALEEGSGEPVNKLMNSW 451 (773)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~--~~~~~---~~~df~~~l~~~sg~~l~~~~~~W 451 (773)
-.++..|+...|.+.|.+.-+.|=... ..... ..+.|...+.+++|.||.+||+.|
T Consensus 318 L~mf~QL~l~fG~~fy~~l~~~yR~~~~~~~p~~~~~k~~~fv~~~S~~ag~nLtpFFe~W 378 (525)
T 4fca_A 318 LVMFWQLHLAYGDQFYPNLHQMYRLLHDTELPKSDEEKKQMFIYMTSKVAGQNLIPFFDKW 378 (525)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHTCCGGGSCCSHHHHHHHHHHHHHHHHTSBCHHHHHHT
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHHHHHHCCChHHHHHHH
Confidence 345677777889876666555554321 11111 245677888999999999999999
No 39
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=22.18 E-value=2.6e+02 Score=22.83 Aligned_cols=21 Identities=10% Similarity=0.139 Sum_probs=15.2
Q ss_pred CeEEEEEeCCCCCcceEEEEEE
Q 004108 85 DEILVLEFAETLPTGMGVLAIG 106 (773)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~ 106 (773)
...+.+.++ +|++|.|+|.-+
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wr 84 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWR 84 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEE
Confidence 456777775 899998876543
No 40
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=21.56 E-value=53 Score=30.94 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|.+
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36789999999995
No 41
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=21.34 E-value=1e+02 Score=32.50 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999985
No 42
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=20.97 E-value=47 Score=35.52 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 004108 300 RVATVVAHELAHQW 313 (773)
Q Consensus 300 ~~~~~iaHElaHqW 313 (773)
..+.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999996
No 43
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=20.94 E-value=2.9e+02 Score=30.78 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=27.1
Q ss_pred HHHHHHHHHHH--HHH----hcCCcCccccch-hH---HhhhHHHHHHHHHhhhh
Q 004108 300 RVATVVAHELA--HQW----FGNLVTMEWWTH-LW---LNEGFATWVSYLAADSL 344 (773)
Q Consensus 300 ~~~~~iaHEla--HqW----fGnlVt~~~w~d-~W---L~EGfA~y~~~~~~~~~ 344 (773)
.+..+++||-. |++ ....-.+..|.. .| ..||.|.|.|.+..+.-
T Consensus 431 ~l~tl~~HEg~PGHhlQ~~~~~~~~~~~~~R~~~~~~a~~EGWAlYaE~l~~e~G 485 (609)
T 3o0y_A 431 GLKTLTYHEANPGHHWQIALNLDQAELPFLRRIAPYNAYTEGWALYSEQVAYELG 485 (609)
T ss_dssp GHHHHHHHHSTTTHHHHHHHHHTCTTSCHHHHTCCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHhhccccHHHHHHHHHhcCCCCHHHHhcccccccChHHHHHHHHHHHhC
Confidence 46678999976 543 211112222221 22 47999999998877653
No 44
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=20.01 E-value=2.8e+02 Score=22.70 Aligned_cols=21 Identities=14% Similarity=0.290 Sum_probs=15.3
Q ss_pred CeEEEEEeCCCCCcceEEEEEE
Q 004108 85 DEILVLEFAETLPTGMGVLAIG 106 (773)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~ 106 (773)
...+.+.++ +|++|.|+|.-+
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wr 86 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWR 86 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEE
Confidence 456777776 899998876543
Done!