BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004112
(773 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/798 (49%), Positives = 513/798 (64%), Gaps = 50/798 (6%)
Query: 1 MKSELGVFDFKEEDELPELEAGKFLGKFKNPNNDDSPALKRELLECVTKETIVQIEGIGN 60
MK VFDFKEEDEL E AGK L KF NP+ +SP L+R+ ++ E V+ E +
Sbjct: 1 MKKNFEVFDFKEEDELAESAAGKLLEKFTNPSPCNSPVLQRQRIQSFCNEKRVEEEEMEG 60
Query: 61 VPCVN-ADAVDCAP-SCNVDCAPSCNEQMCAPMKIGGEEGND----IRAPQMN------- 107
C A AV+ C D + + G E D A +N
Sbjct: 61 PSCAEPATAVESDDHQCEDDSTLVTEAKESRTILTFGLETTDHLEETDAEHVNQGLMLGL 120
Query: 108 -STSCEQSPNLEKDNCGF-------------------ESCISELASRDLCTKGPLLGESQ 147
+ + +++ DN G ES +L + + Q
Sbjct: 121 KTEDLAKETDIDHDNHGLMFGLNSEDDIEETDVDHRVESFSCQLGGNSFYAETSSYSQRQ 180
Query: 148 LCSGNLDPPSNNEPVDVNSDADGSMSEGSSSSPASDIAPNGVSLNGHMSDQWVDDSEVDD 207
L S D S+ E +D+ S D S+S+ S+ S ASD + M++ +D E D
Sbjct: 181 LNSPFSDSSSSEEQIDMMSAIDESLSDRSALSEASDSEDDE---EDWMTEHCFNDEEKID 237
Query: 208 INMGVVVSPDYVFFRDKFCLGYLVVFSCTGIKIKDSNACGVQESFTFEKGIDDIVDIKFQ 267
++ V+++ +YV +D C LV+FSC GIKIK A + F+ E G++DIV I++
Sbjct: 238 LSTAVIMTSEYVILKDMHCAASLVIFSCNGIKIKSFLANNEEVPFSCEFGVEDIVSIQYN 297
Query: 268 WLQRFGSVEVKLHVILNDVAQDDNACGTSGIEELKFSFSDCNWSEQLEKITSLNAKYLAL 327
W Q G + +++ V+L D C +EELK + + NW + +KI SL+ KY A+
Sbjct: 298 WYQNVGLIILRIRVLLKD-----ENCH-EDMEELKIAVKEHNWPNKQQKINSLHVKYPAV 351
Query: 328 WSVDHDNPVDMDGVG---QRRYFPNFDEPFEDVVYPEGDSDAVSISKRDIDLLQPDTFVN 384
W+ D ++ V++ G Q+RYFP+FDEPFEDVVYP+GD DAVSI KRD++LLQP+TFVN
Sbjct: 352 WNTDLEDDVEVSGYNLNQQKRYFPSFDEPFEDVVYPKGDPDAVSICKRDVELLQPETFVN 411
Query: 385 DTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRK 444
DTIIDFYI YLKNQIQ EEKHRFHFFNSFFFRKLADLDKDPSSI+DGKAAFLRVRKWTRK
Sbjct: 412 DTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKLADLDKDPSSIADGKAAFLRVRKWTRK 471
Query: 445 VDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGL 504
VD+FGKDYIF+PVN+NLHWSLIVICHPG+VA+ DL S+KVPCILHMDSIKG+HAGL
Sbjct: 472 VDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKKVPCILHMDSIKGSHAGL 531
Query: 505 KNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAE 564
KNLVQ+YLCEEWKERHK+TS+D+SS+F+N RF+ LELPQQENSFDCGLFLLHYLELFLAE
Sbjct: 532 KNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSLELPQQENSFDCGLFLLHYLELFLAE 591
Query: 565 APVSFSPLKLKKLSSFLNVDWFPPGEASLKRSLIQKLISELLRNRSRVCLDEHQSSRFLE 624
AP++FSP K+ S+FL ++WFPP EASLKR+LIQKLI ELL NRSR +E S
Sbjct: 592 APLNFSPFKIYNASNFLYLNWFPPAEASLKRTLIQKLIFELLENRSREVSNEQNQSCESP 651
Query: 625 NSVN-EMRLEFLSEKCSAATAQHGNLSNSQAGQGVEITLLGATSGRNLQCANDSSLVLKE 683
+VN +M +E LSE+CS +G+++ +Q QG+E+TLL +S R++Q ANDS +VL++
Sbjct: 652 VAVNDDMGIEVLSERCSPLIDCNGDMTQTQDDQGIEMTLLERSSMRHIQAANDSGMVLRD 711
Query: 684 LLEPGV-TAGSLLA--YQSFGEPSSYYHLNGAASAREH-DVETAEEYGYLAAGSNGFQQI 739
L + G GSLL Q F +PSS+YHL+ +SARE D+ET E++ L AG FQ I
Sbjct: 712 LFDSGSNNTGSLLEQLQQPFEDPSSFYHLSNDSSAREQVDMETGEQFMCLNAGEGNFQCI 771
Query: 740 TELTPQVGSISFPSRDFG 757
TE T S SF S + G
Sbjct: 772 TETTSPRASNSFSSWNLG 789
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/452 (44%), Positives = 285/452 (63%), Gaps = 13/452 (2%)
Query: 163 DVNSDADGSMSEGS------SSSPASDIAPNGVSLNGHMSDQWVDDSEVDDINMGVVVSP 216
D NSD +S GS S +S ++ N G ++ D EVD N V++ P
Sbjct: 93 DGNSDLIDVISNGSHRRIGIDSLTSSSLSENDEVSTGEATNPASDPHEVDPENAQVLIIP 152
Query: 217 DYVFFRDKFCLGYLVVFSCTGIKIKDSNACGVQESFTFEKGIDDIVDIKFQWLQRFGSVE 276
D + + D +C + FS + ++ S+ + +F+ + I+DI+ I+ QW +
Sbjct: 153 DVIIYGDIYCTNSKLTFSRNCMNVESSSVNATKGTFSCQWTIEDIIKIESQWCLEVETAF 212
Query: 277 VKLHVILNDVAQDDNACGTSGIEELKFSFSDCNWSEQLEKITSLNAKYLALW--SVDHDN 334
V + + D A SGI+ LKFS D WS+++E I SL+++Y +W ++
Sbjct: 213 VNVLLKSRKPEGVDIAKDISGIDLLKFSVYDPKWSKEVETIRSLDSRYKNIWFDTITESE 272
Query: 335 PVDMDGVGQRRYFPNFDEPFEDVVYPEGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIKY 394
+ G N + FED+VYP+G+ DAV + K+DI+LL+P F+NDTIIDFYIKY
Sbjct: 273 EIAFSGHDLGTSLTNLADSFEDLVYPQGEPDAVVVRKQDIELLKPRRFINDTIIDFYIKY 332
Query: 395 LKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIF 454
LKN+I +E+ RFHFFN FFFRKLA+LDK S G+ A+ RV+KWT+ VD+F KDYIF
Sbjct: 333 LKNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAYQRVQKWTKNVDLFEKDYIF 392
Query: 455 IPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTH-AGLKNLVQSYLC 513
IP+N + HWSL++ICHPG++ VE+ +R VPCILH+DSIKG+H GL N+ SYL
Sbjct: 393 IPINCSFHWSLVIICHPGELVPSHVENPQR---VPCILHLDSIKGSHKGGLINIFPSYLR 449
Query: 514 EEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFSPLK 573
EEWK RH++T+ D SS+ N + I LELPQQENSFDCGLFLLHYL+LF+A+AP F+P
Sbjct: 450 EEWKARHENTTND-SSRAPNMQSISLELPQQENSFDCGLFLLHYLDLFVAQAPAKFNPSL 508
Query: 574 LKKLSSFLNVDWFPPGEASLKRSLIQKLISEL 605
+ + ++FL +WFP EASLKR I +L+ L
Sbjct: 509 ISRSANFLTRNWFPAKEASLKRRNILELLYNL 540
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 146/268 (54%), Gaps = 32/268 (11%)
Query: 355 EDVVYPEGDS----DAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRF--H 408
ED+ YP D D V +S +D+ L P ++ +I+FYI+Y+++ + + +K H
Sbjct: 315 EDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCH 374
Query: 409 FFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVI 468
FFN+FF++KL + + D A F++ R+W + D+F K YIFIP++ +LHWSL++I
Sbjct: 375 FFNTFFYKKLTEAVSYKGN--DRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVII 432
Query: 469 CHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAG--LKNLVQSYLCEEWKERHKDTSED 526
C P K E I+H+DS+ G H + N V+ +L EEW ++D D
Sbjct: 433 CIPD----------KEDESGLTIIHLDSL-GLHPRNLIFNNVKRFLREEWNYLNQDAPLD 481
Query: 527 VSSKFLNFRFIP-------LELPQQENSFDCGLFLLHYLELFLAEAPVSFSPLKLKKLSS 579
+ +R +P +++PQQ+N FDCGLFLL ++ F+ EAP + LK
Sbjct: 482 LPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLK---- 537
Query: 580 FLNVDWFPPGEASLKRSLIQKLISELLR 607
++ WF P EAS R I ++ +L R
Sbjct: 538 MIHKKWFKPEEASALRIKIWNILVDLFR 565
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 149/266 (56%), Gaps = 30/266 (11%)
Query: 355 EDVVYP-EGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRF--HFFN 411
ED+ YP D V + +D++ L P ++ +++FY+++L+ QI + + HFFN
Sbjct: 330 EDICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFN 389
Query: 412 SFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHP 471
++F++KL+D + D A F+R R+W + +D+F K YIFIP++ +LHWSL+++C P
Sbjct: 390 TYFYKKLSDAVTYKGN--DKDAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIP 447
Query: 472 GDVASFKVEDLKRSEKVPCILHMDSIKGTHA--GLKNLVQSYLCEEWKERHKDT-SEDVS 528
K+ E ILH+DS+ G H+ + V+ +L +EW ++D S D+
Sbjct: 448 D----------KKDESGLTILHLDSL-GLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLP 496
Query: 529 SKFLNFRFIP-------LELPQQENSFDCGLFLLHYLELFLAEAPVSFSPLKLKKLSSFL 581
++ +P +++PQQ+N FDCG F+L +++ F+ EAP LK K L F
Sbjct: 497 ISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAP---QRLKRKDLGMF- 552
Query: 582 NVDWFPPGEASLKRSLIQKLISELLR 607
+ WF P EAS R I+ + EL R
Sbjct: 553 DKKWFRPDEASALRIKIRNTLIELFR 578
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 37/235 (15%)
Query: 357 VVYPEGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEE---KHRFHFFNSF 413
+VYP +++++I+ D+ L F+NDTI+DFY++YL ++Q + + H FN+F
Sbjct: 337 LVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTF 396
Query: 414 FFRKLADLDKDPSSISDGKAAFLR-VRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICH-- 470
F+ +L DKD GK R VRKWT+KVD+F K YI +P+N HW L +IC+
Sbjct: 397 FYNRLTSKDKD------GKRLGHRGVRKWTQKVDLFHKKYIIVPINETFHWYLAIICNID 450
Query: 471 ---PGDV----------------ASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSY 511
P D ++ K + + P IL DS+ H G N ++ Y
Sbjct: 451 RLMPVDTKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREY 510
Query: 512 LCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAP 566
L EE ER ++V K + R ++PQQ N DCG++ LH++ELFL E P
Sbjct: 511 LLEEAFER-----KNVHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVELFL-ETP 559
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 69/305 (22%)
Query: 357 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEE-KHRFHFFNSFF 414
+VYP + + ++ D++ L+ F+ND IIDFY+KYL + ++E R H F+SFF
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFF 795
Query: 415 F----RKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVIC- 469
+ RK +L +D +S + RVR WTR ++IF KDYIF+PVN + HW L VIC
Sbjct: 796 YKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 855
Query: 470 -----------------------------------HPGDVASFKVEDLKRSE-------- 486
H S ED + +E
Sbjct: 856 PWLEEAVYEDCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKK 915
Query: 487 --KVPCILHMDSIKGTHAGLKNLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPLEL 541
K PCIL +DS+K A ++N VQ+ YL EW+ + K E + ++ P ++
Sbjct: 916 MCKRPCILILDSLKA--ASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVD--LCP-KV 970
Query: 542 PQQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLIQK 600
P+Q+NS DCG++LL Y+E F + V+F P+ L+K WFP KR I++
Sbjct: 971 PKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1022
Query: 601 LISEL 605
LI +L
Sbjct: 1023 LILKL 1027
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 149/307 (48%), Gaps = 73/307 (23%)
Query: 357 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEE-KHRFHFFNSFF 414
+VYP + + ++ D++ L+ F+ND IIDFY+KYL + ++E R H F+SFF
Sbjct: 749 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 808
Query: 415 F----RKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICH 470
+ RK +L +D ++S + RVR WTR ++IF KDYIF+PVN + HW L VIC
Sbjct: 809 YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 868
Query: 471 P------------------------------------GDVASFKVEDLKRSE-------- 486
P S ED + +E
Sbjct: 869 PWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKK 928
Query: 487 --KVPCILHMDSIKGTHAGLKNLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPL-- 539
K PCIL +DS+K A ++N VQ+ YL EW+ + K +F + L
Sbjct: 929 MCKRPCILILDSLKA--ASVQNTVQNLREYLEVEWEVKLK-----THRQFSKTNMVDLCP 981
Query: 540 ELPQQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLI 598
++P+Q+NS DCG++LL Y+E F + V+F P+ L+K WFP KR I
Sbjct: 982 KVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDI 1033
Query: 599 QKLISEL 605
++LI +L
Sbjct: 1034 RELILKL 1040
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 69/305 (22%)
Query: 357 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEE-KHRFHFFNSFF 414
+VYP + + ++ D++ L+ F+ND IIDFY+KYL + ++E R H F+SFF
Sbjct: 746 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 805
Query: 415 F----RKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVIC- 469
+ RK +L +D ++S + RVR WTR ++IF KDYIF+PVN + HW L VIC
Sbjct: 806 YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 865
Query: 470 -----------------------------------HPGDVASFKVEDLKRSE-------- 486
H S ED + E
Sbjct: 866 PWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPKK 925
Query: 487 --KVPCILHMDSIKGTHAGLKNLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPLEL 541
K PCIL +DS+K A ++N VQ+ YL EW+ + K E + ++ P ++
Sbjct: 926 MCKRPCILILDSLKA--ASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVD--LCP-KV 980
Query: 542 PQQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLIQK 600
P+Q+NS DCG++LL Y+E F + V+F P+ L+K WFP KR I++
Sbjct: 981 PKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1032
Query: 601 LISEL 605
LI +L
Sbjct: 1033 LILKL 1037
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 149/305 (48%), Gaps = 69/305 (22%)
Query: 357 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEE-KHRFHFFNSFF 414
+VYP + + ++ D++ L+ F+ND IIDFY+KYL + ++E R H F+SFF
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFF 795
Query: 415 F----RKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICH 470
+ RK +L +D +S + RVR WTR ++IF KDYIF+PVN + HW L VIC
Sbjct: 796 YKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 855
Query: 471 P----------GDVASFKVEDL------------------------------------KR 484
P S + +D K+
Sbjct: 856 PWLEEAVYEDFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKK 915
Query: 485 SEKVPCILHMDSIKGTHAGLKNLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPLEL 541
K PCIL +DS+K A ++N VQ+ YL EW+ + K E + ++ P ++
Sbjct: 916 MCKRPCILILDSLKA--ASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVD--LCP-KV 970
Query: 542 PQQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLIQK 600
P+Q+NS DCG++LL Y+E F + V+F P+ L+K WFP KR I++
Sbjct: 971 PKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1022
Query: 601 LISEL 605
LI +L
Sbjct: 1023 LILKL 1027
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Query: 350 FDEPFED-VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLK-NQIQAEEKHR 406
F P E +VYP + +S++ D+ L F+ND IIDFY+KYL +++ E+ R
Sbjct: 667 FIGPVEKLIVYPPPPAKGGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADR 726
Query: 407 FHFFNSFFFRKLADLDK---DPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHW 463
H F+SFF+++L ++ + +++S + RV+ WTR VDIF KD+IF+P+N HW
Sbjct: 727 IHIFSSFFYKRLNQRERRNPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHW 786
Query: 464 SLIVICHPG 472
L V+C PG
Sbjct: 787 FLAVVCFPG 795
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 26/163 (15%)
Query: 487 KVPCILHMDSIKG-THAGLKNLVQSYLCEEW---KERHKDTSEDVSSKFLNFRFIPLELP 542
K PCIL MDS++G + + + +++ YL EW K + S+DV + ++P
Sbjct: 988 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDV------MKGSNPKVP 1041
Query: 543 QQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLIQKL 601
QQ N DCG+++L Y+E F ++F P+ L ++WFPP KR I+ +
Sbjct: 1042 QQNNFSDCGVYVLQYVESFFENPVLNFELPMNL--------MNWFPPPRMKTKREEIRNI 1093
Query: 602 ISELLRNRSRVCLDEHQSSRFLENSVNEMRLEFLSEKCSAATA 644
I +L ++S+ + L++S+ E L +E+ ++A+
Sbjct: 1094 ILKLQESQSK-------DKKLLKDSLAETSLGDGAEQYASASG 1129
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Query: 350 FDEPFED-VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLK-NQIQAEEKHR 406
F P E +VYP + +S++ D+ L F+ND IIDFY+KYL +++ E+ R
Sbjct: 647 FIGPVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADR 706
Query: 407 FHFFNSFFFRKLADLDK---DPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHW 463
H F+SFF+++L ++ + +++S + RV+ WTR VDIF KD+IF+P+N HW
Sbjct: 707 IHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHW 766
Query: 464 SLIVICHPG 472
L V+C PG
Sbjct: 767 FLAVVCFPG 775
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 487 KVPCILHMDSIKG-THAGLKNLVQSYLCEEW---KERHKDTSEDVSSKFLNFRFIPLELP 542
K PCIL MDS++G + + + +++ YL EW K + S+DV + ++P
Sbjct: 969 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDV------MKGSNPKVP 1022
Query: 543 QQENSFDCGLFLLHYLELFLAEAPVSFS-PLKLKKLSSFLNVDWFPPGEASLKRSLIQKL 601
QQ N DCG+++L Y+E F +SF P+ L +WFPP KR I+ +
Sbjct: 1023 QQNNFSDCGVYVLQYVESFFENPILSFELPMNL--------ANWFPPPRMRTKREEIRNI 1074
Query: 602 ISELLRNRSR 611
I +L ++S+
Sbjct: 1075 ILKLQEDQSK 1084
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 35/201 (17%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRF--HFFNSFFFRKLADLDKD 424
+ I+ + L P ++ND +I+ Y++ LK + E K H+FN+FF++KL
Sbjct: 288 IDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKL------ 341
Query: 425 PSSISDGKAAFLRVRKWT--RKVD--IFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVE 480
+SD F VR+WT RK+ + D IF+P++ +HW+L VI +
Sbjct: 342 ---VSDSGYNFKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAVINN---------- 388
Query: 481 DLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLE 540
R K +L++DS+ G + N + Y+ +E E+ + + + + + F+ +
Sbjct: 389 ---RESK---LLYLDSLNGVDPMILNALAKYMGDEANEK---SGKKIDANSWDMEFVE-D 438
Query: 541 LPQQENSFDCGLFLLHYLELF 561
LPQQ+N +DCG+F+L Y++ F
Sbjct: 439 LPQQKNGYDCGMFMLKYIDFF 459
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 40/234 (17%)
Query: 347 FPNFDEPFEDV---VYPEGDSDAV-------SISKRDIDLLQPDTFVNDTIIDFYIKYLK 396
FP E E V+ G+ D V +I+++DI L ++ND II+FY+ L
Sbjct: 416 FPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLM 475
Query: 397 NQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIP 456
+ + + H FN+FFF KL A + V++WT+KVD+F D + +P
Sbjct: 476 ERSKEKGFPSVHAFNTFFFTKLKT------------AGYQAVKRWTKKVDVFSVDILLVP 523
Query: 457 VNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEW 516
++ +HW L V+ D +R I + DS+ G + ++ YL +E
Sbjct: 524 IHLGVHWCLAVV------------DFRRK----SITYYDSMGGINNEACRILLQYLKQES 567
Query: 517 KERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFS 570
+ K E ++ + F E+PQQ N DCG+F Y + + P++F+
Sbjct: 568 VD--KKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFT 619
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 40/234 (17%)
Query: 347 FPNFDEPFEDV---VYPEGDSDAV-------SISKRDIDLLQPDTFVNDTIIDFYIKYLK 396
FP E E V+ G+ D V +I+++DI L ++ND II+FY+ L
Sbjct: 421 FPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLM 480
Query: 397 NQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIP 456
+ + + H FN+FFF KL A + V++WT+KVD+F D + +P
Sbjct: 481 ERSKEKGLPSVHAFNTFFFTKLKT------------AGYQAVKRWTKKVDVFSVDILLVP 528
Query: 457 VNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEW 516
++ +HW L V+ D ++ I + DS+ G + ++ YL +E
Sbjct: 529 IHLGVHWCLAVV------------DFRKKN----ITYYDSMGGINNEACRILLQYLKQES 572
Query: 517 KERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFS 570
++ + E ++ + F E+PQQ N DCG+F Y + + P++F+
Sbjct: 573 IDKKR--KEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFT 624
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 40/234 (17%)
Query: 347 FPNFDEPFEDV---VYPEGDSDAV-------SISKRDIDLLQPDTFVNDTIIDFYIKYLK 396
FP E E V+ G+ D V +I+++DI L ++ND II+FY+ L
Sbjct: 420 FPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLM 479
Query: 397 NQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIP 456
+ + + H FN+FFF KL A + V++WT+KVD+F D + +P
Sbjct: 480 ERSKEKGLPSVHAFNTFFFTKLKT------------AGYQAVKRWTKKVDVFSVDILLVP 527
Query: 457 VNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEW 516
++ +HW L V+ D ++ I + DS+ G + ++ YL +E
Sbjct: 528 IHLGVHWCLAVV------------DFRKKN----ITYYDSMGGINNEACRILLQYLKQES 571
Query: 517 KERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFS 570
++ + E ++ + F E+PQQ N DCG+F Y + + P++F+
Sbjct: 572 IDKKR--KEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFT 623
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 40/218 (18%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPS 426
+ I++ DI L+ ++ND +I+FY+ L + + + H F++FF+ KL
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKS------ 448
Query: 427 SISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSE 486
+ V++WT+ V++F ++ I +P++ +HWSL+VI DL++
Sbjct: 449 ------GGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI------------DLRKK- 489
Query: 487 KVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFL---NFRFIPLELPQ 543
C+ ++DS+ + ++ YL +E K T ++ L ++ P E+PQ
Sbjct: 490 ---CLKYLDSMGQKGHRICEILLQYLQDESK-----TKRNIDLNLLEWTHYSMKPHEIPQ 541
Query: 544 QENSFDCGLFLLHYLELFLAEAPVSFS----PLKLKKL 577
Q N DCG+F Y + + P++F+ PL KK+
Sbjct: 542 QLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKM 579
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 34/215 (15%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPS 426
+ I++ DI L+ ++ND +I+FY+ L + + + H F++FF+ KL
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKS------ 448
Query: 427 SISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSE 486
+ V++WT+ V++F ++ I +P++ +HWSL+VI DL++
Sbjct: 449 ------GGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI------------DLRKK- 489
Query: 487 KVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQEN 546
C+ ++DS+ + ++ YL +E K K S+ ++ + P E+PQQ N
Sbjct: 490 ---CLKYLDSMGQKGHRICEILLQYLQDESKT--KRNSDLNLLEWTHHSMKPHEIPQQLN 544
Query: 547 SFDCGLFLLHYLELFLAEAPVSFS----PLKLKKL 577
DCG+F Y + + P++F+ PL KK+
Sbjct: 545 GSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKM 579
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 111/215 (51%), Gaps = 34/215 (15%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPS 426
+ I++ DI L+ ++ND +I+FY+ L + + + H F++FF+ KL
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHAFSTFFYPKLKS------ 447
Query: 427 SISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSE 486
+ V++WT+ V++F ++ + +P++ +HWSL+V+ DL++
Sbjct: 448 ------GGYQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVM------------DLRKK- 488
Query: 487 KVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQEN 546
C+ ++DS+ + ++ YL +E K + ++T ++ ++ ++ P E+PQQ N
Sbjct: 489 ---CLKYLDSMGQKGHRICEILLQYLQDESKTK-RNTDLNL-LEWTHYSMKPHEIPQQLN 543
Query: 547 SFDCGLFLLHYLELFLAEAPVSFS----PLKLKKL 577
DCG+F Y + + P++F+ PL KK+
Sbjct: 544 GSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKM 578
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 110/215 (51%), Gaps = 34/215 (15%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPS 426
+ I++ DI L+ ++ND +I+FY+ L + + + H ++FF+ KL
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHALSTFFYPKLKS------ 447
Query: 427 SISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSE 486
+ V++WT+ V++F ++ + +P++ +HWSL+V+ DL++
Sbjct: 448 ------GGYQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVM------------DLRKK- 488
Query: 487 KVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQEN 546
C+ ++DS+ + ++ YL +E K + ++T ++ ++ ++ P E+PQQ N
Sbjct: 489 ---CLKYLDSMGQKGHRICEILLQYLQDESKTK-RNTDLNL-LEWTHYSMKPHEIPQQLN 543
Query: 547 SFDCGLFLLHYLELFLAEAPVSFS----PLKLKKL 577
DCG+F Y + + P++F+ PL KK+
Sbjct: 544 GSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKM 578
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 36/202 (17%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRF---HFFNSFFFRKLADLDK 423
+ I+ + + L+P ++ND +I+ Y+ LK + +A E +F HFFN+FFF KL +
Sbjct: 300 IDITGKILRCLKPGKWLNDEVINLYMVLLKER-EAREPKKFLKCHFFNTFFFTKLVN--- 355
Query: 424 DPSSISDGKAAFLRVRKWT--RKVDIFGKD--YIFIPVNFNLHWSLIVICHPGDVASFKV 479
S + VR+WT +++ KD IFIP++ N+HW+L VI +
Sbjct: 356 -----SATGYNYGAVRRWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVI---------NI 401
Query: 480 EDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPL 539
+D K ++DS KG + + + Y +E +++ + DVS F
Sbjct: 402 KDQK-------FQYLDSFKGREPKILDALARYFVDEVRDK-SEVDLDVSRWRQEF---VQ 450
Query: 540 ELPQQENSFDCGLFLLHYLELF 561
+LP Q N FDCG+F++ Y++ +
Sbjct: 451 DLPMQRNGFDCGMFMVKYIDFY 472
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 36/211 (17%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRF--HFFNSFFFRKLADLDKD 424
+ IS + L+P+ ++ND + + Y++ LK + + + F HFFN+FF+ KL
Sbjct: 139 IDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKL------ 192
Query: 425 PSSISDGKAAFLRVRKWTRK----VDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVE 480
+S + V +WT K D+ D IF+P++ ++HW+L VI +
Sbjct: 193 ---VSGSGYNYKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVINN---------- 239
Query: 481 DLKRSEKVPCILHMDSI-KGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPL 539
R K +++DS+ G + N + YL +E K++ + DVSS + +
Sbjct: 240 ---RERK---FVYLDSLFTGVGHTILNAMAKYLVDEVKQKSQKNI-DVSSWGMEY---VE 289
Query: 540 ELPQQENSFDCGLFLLHYLELFLAEAPVSFS 570
E PQQ+N +DCG+F+L Y++ + + FS
Sbjct: 290 ERPQQQNGYDCGMFMLKYIDFYSRGLSLQFS 320
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 45/202 (22%)
Query: 373 DIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGK 432
D+ L ++ND +I+ Y + + + + + HFFNSFF R+L
Sbjct: 573 DLATLDGQNWLNDQVINMYGELIMDAV----PDKVHFFNSFFHRQLVT------------ 616
Query: 433 AAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCIL 492
+ V++WT+KVD+F K + IP++ +HWSLI + + SF
Sbjct: 617 KGYNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISF--------------- 661
Query: 493 HMDSIKGTHAG--LKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLE--LPQQENSF 548
DS +G H ++N ++ YL E +E+++ +FL + +PQQ+N
Sbjct: 662 -YDS-QGIHFKFCVEN-IRKYLLTEAREKNR-------PEFLQGWQTAVTKCIPQQKNDS 711
Query: 549 DCGLFLLHYLELFLAEAPVSFS 570
DCG+F+L Y + E P FS
Sbjct: 712 DCGVFVLQYCKCLALEQPFQFS 733
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 45/202 (22%)
Query: 373 DIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGK 432
D+ L ++ND +I+ Y + + + + + HFFNSFF R+L
Sbjct: 573 DLATLDGQNWLNDQVINMYGELIMDAVPD----KVHFFNSFFHRQLVT------------ 616
Query: 433 AAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCIL 492
+ V++WT+KVD+F K + IP++ +HWSLI + + SF
Sbjct: 617 KGYNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISF--------------- 661
Query: 493 HMDSIKGTHAG--LKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLE--LPQQENSF 548
DS +G H ++N ++ YL E +E+++ +FL + +PQQ+N
Sbjct: 662 -YDS-QGIHFKFCVEN-IRKYLLTEAREKNR-------PEFLQGWQTAVTKCIPQQKNDS 711
Query: 549 DCGLFLLHYLELFLAEAPVSFS 570
DCG+F+L Y + E P FS
Sbjct: 712 DCGVFVLQYCKCLALEQPFQFS 733
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 45/202 (22%)
Query: 373 DIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGK 432
D+ L ++ND +I+ Y + + + + + HFFNSFF R+L ++ G
Sbjct: 567 DLATLDGQNWLNDQVINMYGELIMDAV----PDKVHFFNSFFHRQL---------VTKG- 612
Query: 433 AAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCIL 492
+ V++WT+KVD+F K + IP++ +HWSLI + + SF
Sbjct: 613 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSSRIISF--------------- 655
Query: 493 HMDSIKGTHAG--LKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLE--LPQQENSF 548
DS +G H ++N ++ YL E +E+++ +FL + +PQQ+N
Sbjct: 656 -YDS-QGIHFKFCVEN-IRKYLLTEAREKNR-------PEFLQGWQTAVTKCIPQQKNDS 705
Query: 549 DCGLFLLHYLELFLAEAPVSFS 570
DCG+F+L Y + E P FS
Sbjct: 706 DCGVFVLQYCKCLALEQPFQFS 727
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 359 YPEGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIK-YLKNQIQAE--EKHRFHFFNSFFF 415
Y D + +I+ +D L +VND+I+DF+ K Y+++ I+ ++ + H +SFF+
Sbjct: 434 YKFNDGSSYTITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFY 493
Query: 416 RKLADLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVA 475
KL IS+ + V+KW D+F K Y+ IP+N + HW +I + +
Sbjct: 494 TKL---------ISNPADYYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAIL 544
Query: 476 SFK----VEDLKRSEKVPC------ILHMDSIKGTHAG----LKNLVQSYLCEEWKERHK 521
F D S+++ IL DS++ TH+ +K + SY +++ +
Sbjct: 545 DFHQNKDKNDAINSDEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLD 604
Query: 522 DTSEDVSSKFLNFRFIPLELPQQENSFDCGLFLLHYLELFLAEAPV 567
T + + P +PQQ N DCG+ ++ + F E PV
Sbjct: 605 KTQ-------IKMKTCP--VPQQPNMSDCGVHVILNIRKFF-ENPV 640
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 37/258 (14%)
Query: 366 AVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHR------FHFFNSFFFRKLA 419
+++I D LQ +NDT+IDFY+ ++ + + F+++ R+ A
Sbjct: 130 SIAIRISDFCCLQEKDLLNDTMIDFYLNHIVEHVLPDSNGSNVTVLPSIFWHNLSLRQHA 189
Query: 420 DLDKDPSSISDGKAAFLR---VRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVAS 476
+D +SD + L+ + + D+ DYI +PVN HWSL VICHP
Sbjct: 190 FDSEDEKMMSDEQKMDLKFGDLHDFVADFDLQDFDYIVVPVNEWEHWSLAVICHPF---- 245
Query: 477 FKVEDLKRSEKVPCILHMDSIKGTHAGLKN---LVQSYLCEEWKERHKDTSEDVSSKFLN 533
+ + ++ + L+N L++S++ +++R + + F
Sbjct: 246 --------TAQARTVIFDSQLTADLNNLQNMATLIESFMKYSYEKRTGN-----AMPFPL 292
Query: 534 FRFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFSPLKLKKLSSFLNVDWFPPGEASL 593
+P +PQQ N+FDCG+F+ + FL P K L +F +P +
Sbjct: 293 PCILPQRMPQQTNNFDCGIFIAEFARRFLLSPP--------KDLDNFDFAREYPDFSTAT 344
Query: 594 KRSLIQKLISELLRNRSR 611
KR+ +Q+++ L NR+R
Sbjct: 345 KRTEMQRVVLSLSTNRAR 362
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 41/202 (20%)
Query: 363 DSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKH-RFHFFNSFFFRKLADL 421
D+ ++ I K+D+ L ++ND II+FY++ + ++ + K+ + + FN+FF+ +
Sbjct: 497 DAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPKIYAFNTFFYSNI--- 553
Query: 422 DKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVED 481
+S G A+ V++WTRKVDIF D + +PV+ +HW + VI D+ K+E
Sbjct: 554 ------VSKGYAS---VKRWTRKVDIFAFDIVLVPVHLGMHWCMAVI----DMGEKKIE- 599
Query: 482 LKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLE- 540
DS+ + + ++ YL E S D +NF ++
Sbjct: 600 -----------FYDSLYDGNTAVLPALRGYLEAE--------SLDKKKTAMNFSGWTIQQ 640
Query: 541 ---LPQQENSFDCGLFLLHYLE 559
+P+Q+N DCG+F + E
Sbjct: 641 MTDIPRQQNGSDCGVFSCQFGE 662
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 47/210 (22%)
Query: 373 DIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGK 432
D+ L ++ND +++ Y + + + + HFFNSFF+ KL + DG
Sbjct: 392 DLGTLYGQNWLNDQVMNMYGDLVMDTV----PEKVHFFNSFFYDKLR------TKGYDG- 440
Query: 433 AAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCIL 492
V++WT+ VDIF K+ + IP++ +HWSLI + D++R I
Sbjct: 441 -----VKRWTKNVDIFNKELLLIPIHLEVHWSLISV------------DVRRR----TIT 479
Query: 493 HMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFR-----FIPLELPQQENS 547
+ DS + + + YL +E V L+F + + + +Q N
Sbjct: 480 YFDSQRTLNRRCPKHIAKYL----------QAEAVKKDRLDFHQGWKGYFKMNVARQNND 529
Query: 548 FDCGLFLLHYLELFLAEAPVSFSPLKLKKL 577
DCG F+L Y + P SF+ + KL
Sbjct: 530 SDCGAFVLQYCKHLALSQPFSFTQQDMPKL 559
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 47/210 (22%)
Query: 373 DIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSISDGK 432
D+ L ++ND +++ Y + + + + HFFNSFF+ KL + DG
Sbjct: 386 DLGTLYGQNWLNDQVMNMYGDLVMDTV----PEKVHFFNSFFYDKLR------TKGYDG- 434
Query: 433 AAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLKRSEKVPCIL 492
V++WT+ VDIF K+ + IP++ +HWSLI + D++R I
Sbjct: 435 -----VKRWTKNVDIFNKELLLIPIHLEVHWSLISV------------DVRRR----TIT 473
Query: 493 HMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFR-----FIPLELPQQENS 547
+ DS + + + YL +E V L+F + + + +Q N
Sbjct: 474 YFDSQRTLNRRCPKHIAKYL----------QAEAVKKDRLDFHQGWKGYFKMNVARQNND 523
Query: 548 FDCGLFLLHYLELFLAEAPVSFSPLKLKKL 577
DCG F+L Y + P SF+ + KL
Sbjct: 524 SDCGAFVLQYCKHLALSQPFSFTQQDMPKL 553
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 52/227 (22%)
Query: 363 DSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLD 422
+ D + I+ RD L P ++NDTII+F++KY++ FNSFF+ L++
Sbjct: 429 NRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKSTPNTVA-----FNSFFYTNLSE-- 481
Query: 423 KDPSSISDGKAAFLRVRKWT--RKVDIFGKDYIFIPVNFNL-HWSLIVICHPGDVASFKV 479
+ VR+W +K I D IF P+N N HW+L +I
Sbjct: 482 ----------RGYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGII----------- 520
Query: 480 EDLKRSEKVPCILHMDSIKG-----THAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNF 534
DLK+ I ++DS+ + A L +L Q Y+ EE K ED F
Sbjct: 521 -DLKKK----TIGYVDSLSNGPNAMSFAILTDL-QKYVMEESKH---TIGED-------F 564
Query: 535 RFIPLELPQQENSFDCGLFLLHYLELFLAEAPVSFSPLKLKKLSSFL 581
I L+ PQQ N +DCG+++ A+AP+ F ++ F+
Sbjct: 565 DLIHLDCPQQPNGYDCGIYVCMNTLYGSADAPLDFDYKDAIRMRRFI 611
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEK-HRFHFFNSFFFRKLADLDKDP 425
+ I+ +D+ L+ ++ND +I+FY+ + + + + R H FN+FF+ L
Sbjct: 377 IPITLKDLHTLRNRQWLNDEVINFYMNLISERSKIDSSLPRVHGFNTFFYTSLQ------ 430
Query: 426 SSISDGKAAFLRVRKWTRK--VDIFGKDYIFIPVNFNLHWSLIVICHPGDVASFKVEDLK 483
+ + VR+W +K V+I D +FIPV+ ++HW + VI + K
Sbjct: 431 ------RRGYAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVIN----------KSKK 474
Query: 484 RSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQ 543
R E + DS+ G+ + +L++ Y E K + DVS + N F+ P+
Sbjct: 475 RFE------YWDSLAGSPGKVFDLLRDYYIAETK-----GAVDVSD-WEN--FMDDNSPR 520
Query: 544 QENSFDCGLFLLHYLELFLAEAPVSFSP-----LKLKKLSSFLNVDWF 586
Q N DCG+F E PV FS L++K +S ++ +
Sbjct: 521 QRNGHDCGVFACKTAECVSRNVPVQFSQNDMPELRIKMAASIIDAQIY 568
>sp|Q9LSS7|RUBP1_ARATH NEDD8-specific protease 1 OS=Arabidopsis thaliana GN=NEDP1 PE=2
SV=1
Length = 226
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 55/200 (27%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPS 426
V + + D+D+L F+ND +I+FY+ +L + +F+ D +
Sbjct: 16 VVLRRSDLDILNGPIFLNDRVIEFYLSFLSTVHSSTTISLIPPSIAFWISNCPDTE---- 71
Query: 427 SISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFN---------LHWSLIVICHPGDVASF 477
++ + + +++ KD + +PVN N LHWSL+V +
Sbjct: 72 ----------YLKDFMKPLNLRDKDLLILPVNDNSNVEVAEGGLHWSLLVYYKEANT--- 118
Query: 478 KVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEW--KERHKDTSEDVSSKFLNFR 535
+H DS G + W K+ K S VS+ +++
Sbjct: 119 -------------FVHHDSYMGVN-------------RWSAKQLFKAVSPFVSNGDASYK 152
Query: 536 FIPLELPQQENSFDCGLFLL 555
+ PQQ+N +DCG+FLL
Sbjct: 153 ECT-DTPQQKNGYDCGVFLL 171
>sp|Q9D2Z4|SENP8_MOUSE Sentrin-specific protease 8 OS=Mus musculus GN=Senp8 PE=1 SV=2
Length = 221
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 59/201 (29%)
Query: 369 ISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSI 428
+ + D+ LL P +++ND II F +Y N +FH D I
Sbjct: 13 LRQSDVSLLDPPSWLNDHIIGFAFEYFANS-------QFH-----------DCSDHVCFI 54
Query: 429 SDGKAAFLR-------VRKWTRKVDIFGKDYIFIPVNFN-------LHWSLIVICHPGDV 474
S F++ + + +D+ K +F+ +N N HWSL+V D
Sbjct: 55 SPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQ--DK 112
Query: 475 ASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNF 534
SF H DS H+ ++ + E+ K + SK
Sbjct: 113 NSF--------------FHYDS----HSRSNSIHAKQVAEKLKAF-------LGSKGDKL 147
Query: 535 RFIPLELPQQENSFDCGLFLL 555
F+ + P QENS+DCG++++
Sbjct: 148 VFVEEKAPAQENSYDCGMYVI 168
>sp|Q96LD8|SENP8_HUMAN Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1
Length = 212
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 59/201 (29%)
Query: 369 ISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSI 428
+ + D+ LL P +++ND II F +Y N +FH D S I
Sbjct: 13 LRQSDVSLLDPPSWLNDHIIGFAFEYFANS-------QFH-----------DCSDHVSFI 54
Query: 429 SDGKAAFLR-------VRKWTRKVDIFGKDYIFIPVNFN-------LHWSLIVICHPGDV 474
S F++ + + +D+ K +F+ +N N HWSL+V D
Sbjct: 55 SPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQ--DK 112
Query: 475 ASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNF 534
SF H DS +++ V L E + R D
Sbjct: 113 NSF--------------FHYDSHSRSNSVHAKQVAEKL-EAFLGRKGD----------KL 147
Query: 535 RFIPLELPQQENSFDCGLFLL 555
F+ + P Q+NS+DCG++++
Sbjct: 148 AFVEEKAPAQQNSYDCGMYVI 168
>sp|Q21JY6|PPNK_SACD2 Probable inorganic polyphosphate/ATP-NAD kinase OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ppnK
PE=3 SV=1
Length = 294
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 598 IQKLISELLRNRSRVCLDEHQSSRFLENSVNEMRLEFLSEKCSAATAQHGN---LSNSQA 654
+++LIS L + V LDE + + EN + + E L+++C G+ LS ++A
Sbjct: 22 LRRLISFLAKQNIEVMLDEETAEFYTENELEIVSRETLAKRCDLIIVVGGDGSLLSAARA 81
Query: 655 GQGVEITLLGATSGR 669
G + LLG GR
Sbjct: 82 FAGKPVKLLGINRGR 96
>sp|O13612|NEP2_SCHPO NEDD8-specific protease 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep2 PE=1 SV=1
Length = 415
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 367 VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQI----QAEEKHRFHFFNSFFFRKLADLD 422
VS+ K D+D +P ++ DT IDF+ + + Q+ EE + + LA
Sbjct: 76 VSLRKNDVDHFRPGYWILDTNIDFFYEIMLRQVLLKRPKEESQQIYLLRPAMVFFLAQAP 135
Query: 423 KDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVN--------FNLHWSLIVI 468
+P I + F +IF+P+N HWSL+V+
Sbjct: 136 -NPLEIESALPPAM-----------FDASFIFLPINDTNECGIESGSHWSLLVV 177
>sp|Q5FVJ8|SENP8_RAT Sentrin-specific protease 8 OS=Rattus norvegicus GN=Senp8 PE=2 SV=1
Length = 217
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 59/201 (29%)
Query: 369 ISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKHRFHFFNSFFFRKLADLDKDPSSI 428
+ + D+ LL P ++ND II F +Y + +FH D I
Sbjct: 13 LRQSDVSLLDPPNWLNDHIIGFAFEYFASS-------QFH-----------DCSDHVCFI 54
Query: 429 SDGKAAFLR-------VRKWTRKVDIFGKDYIFIPVNFN-------LHWSLIVICHPGDV 474
S F++ + + +D+ K +F+ +N N HWSL+V D
Sbjct: 55 SPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQ--DK 112
Query: 475 ASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTSEDVSSKFLNF 534
SF H DS H+ ++ + E+ K + SK
Sbjct: 113 NSF--------------FHYDS----HSRSNSIHAKQVAEKLKAF-------LGSKGDKL 147
Query: 535 RFIPLELPQQENSFDCGLFLL 555
F+ + P Q+NS+DCG++++
Sbjct: 148 VFVEEKAPAQQNSYDCGMYVI 168
>sp|Q82ZJ2|PNP_ENTFA Polyribonucleotide nucleotidyltransferase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=pnp PE=3 SV=1
Length = 704
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 26/56 (46%)
Query: 349 NFDEPFEDVVYPEGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEK 404
FD E V + E AV K D+DLLQ D + I D Y +K + EEK
Sbjct: 207 GFDAIKELVAFQEEIVAAVGKPKMDVDLLQVDADLKKEIFDAYYNTMKTAVMTEEK 262
>sp|Q4J860|ILVD_SULAC Dihydroxy-acid dehydratase OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=ilvD PE=3 SV=1
Length = 561
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 665 ATSGRNLQCANDSSLVLKELLEPGVTAGSLLAYQSF-GEPSSYYHLNGAASAREHDVETA 723
ATS R + ++ + LLE GV + +L +++F + + G+ +A H + A
Sbjct: 224 ATSSRRIMYVRETGKAVSRLLENGVKSRDILTFEAFENAIAVLMAMGGSTNAVLHLLAIA 283
Query: 724 EEYGYLAAGSNGFQQITELTPQVGSISFPSRDF 756
E G + + F +I++ TP +GS+ P D+
Sbjct: 284 YEAG-VKLTLDDFNRISKRTPYIGSLK-PGGDY 314
>sp|Q4ZNR4|TRUB_PSEU2 tRNA pseudouridine synthase B OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=truB PE=3 SV=1
Length = 305
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 465 LIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTS 524
L V C G VED+ EK+ C ++ ++ T AG L Q+ EE ++ H D
Sbjct: 170 LSVDCSKGTYIRTLVEDI--GEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGG 227
Query: 525 EDVSSKFL 532
+ +FL
Sbjct: 228 NEAVDRFL 235
>sp|Q48E79|TRUB_PSE14 tRNA pseudouridine synthase B OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=truB PE=3 SV=1
Length = 305
Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 465 LIVICHPGDVASFKVEDLKRSEKVPCILHMDSIKGTHAGLKNLVQSYLCEEWKERHKDTS 524
L V C G VED+ EK+ C ++ ++ T AG L Q+ EE ++ H D
Sbjct: 170 LSVDCSKGTYIRTLVEDI--GEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGG 227
Query: 525 EDVSSKFL 532
+ +FL
Sbjct: 228 NEAVDRFL 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 302,861,725
Number of Sequences: 539616
Number of extensions: 13486054
Number of successful extensions: 30586
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 30414
Number of HSP's gapped (non-prelim): 116
length of query: 773
length of database: 191,569,459
effective HSP length: 125
effective length of query: 648
effective length of database: 124,117,459
effective search space: 80428113432
effective search space used: 80428113432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)