BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004114
(773 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430210|ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
[Vitis vinifera]
Length = 807
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/837 (56%), Positives = 574/837 (68%), Gaps = 94/837 (11%)
Query: 1 MSRSTASFLTIRSLTALSKV-SSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDS 59
MS A+ LTI SLTALSKV S +S S+KTL LLKNLSTA ER DFQ NG+ +++S
Sbjct: 1 MSAKRATLLTINSLTALSKVCPSPNSSSASSKTLTLLKNLSTAAERADFQISNGFQKENS 60
Query: 60 FQNDQHPNGF-CTEQSSVDFQQKPN-----------------------EHGLNPNGGFTE 95
+N Q+P+GF Q+ ++FQQKPN + +NPNGGF E
Sbjct: 61 PENHQNPDGFDADNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPNGGFEE 120
Query: 96 RRVNDYWDNPLRQNGNC-GFYGQNHGGLKQNRID----NCQKAS--------GGYRESFS 142
N++ NP+ QN N G+ GQN L+QN N +S GYRE
Sbjct: 121 NLRNEFHRNPIGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNPRGYREYAR 180
Query: 143 SEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIYGESSRGFQQNSNEFYQHHAGVNSESHI 202
+E ++N ++GNF +YRQ G G N NE + ES I
Sbjct: 181 NEFKQNPFSQSGNFSRNYRQGSG---------------GLPANQNELCR-------ESTI 218
Query: 203 NEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVM 262
NE+Q N Q+GN N Y N G+ Q G N NVQN Y G EV
Sbjct: 219 NEYQQNLVGQSGNINGYCGQNYGE------SLQKSNDFYGQNRNVQNSY--YSEGRAEVN 270
Query: 263 QNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGH---------------YSGNFGIHQ 307
QNRNG Q SE+LG N ++ Q QQ+ SG+ Y N G +Q
Sbjct: 271 QNRNGNCQQIISETLGDLNRTYGENIRQFQQSPSGYHRENLQQYQPSENMYYRENVGQYQ 330
Query: 308 NSPSF-----------YQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQV 356
+P+ YQQ+ N QYQ + + QYQQNPN QYQ+ S QN M+ S
Sbjct: 331 QNPNVGQYQQNPNIGQYQQNPNVAQYQQNPNVAQYQQNPNVAQYQTNSNEFQNSMVGSPK 390
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
+N K + + EA+ SSQ +GTLE++D K+GKVKEAIEVLGLLEKQ VDLP + +L
Sbjct: 391 SSNYKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRL 450
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
M+ACG+AKAL+EAKAVHE + + +SPL+VSTYN IL+MYS+C SMDDA++VF M ER+L
Sbjct: 451 MKACGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNL 510
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
TSWDTMIT FAKN LGE+A+D+F QFK++GLKPD Q+FIGVF ACS LGDV+EGMLHF S
Sbjct: 511 TSWDTMITWFAKNDLGEEAIDLFIQFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNS 570
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
MSKDYGIVPSMKHY S+VDMLG++GYLDEALEF+EKMP+EP VDVWE LMN+CR+ GN+E
Sbjct: 571 MSKDYGIVPSMKHYASMVDMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNME 630
Query: 597 LGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG 656
+GDRCAE+VE L+PSRL E+SKAGLVPV AS+L KEKE KKLASQNLLEVRS+VHEYRAG
Sbjct: 631 IGDRCAELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAG 690
Query: 657 DTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLL 716
DTSHPE DKIYA +RGL+AQMKEAGY+PETRFVLHDIDQEGKEEALLAHSERLAV++GLL
Sbjct: 691 DTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLL 750
Query: 717 SSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SSPAR+PIR++KNLRVCGDCH+ALKIISK+VGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 751 SSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 807
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/836 (56%), Positives = 572/836 (68%), Gaps = 94/836 (11%)
Query: 1 MSRSTASFLTIRSLTALSKV-SSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDS 59
MS A+ LTI SLTALSKV S +S S+KTL LLKNLSTA ER DFQ NG+ +++S
Sbjct: 1 MSAKRATLLTINSLTALSKVCPSPNSSSASSKTLTLLKNLSTAAERADFQXXNGFQKENS 60
Query: 60 FQNDQHPNGF-CTEQSSVDFQQKPN-----------------------EHGLNPNGGFTE 95
+N Q+P+GF Q+ ++FQQKPN + +NPNGGF E
Sbjct: 61 PENXQNPDGFDAXNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPNGGFEE 120
Query: 96 RRVNDYWDNPLRQNGNC-GFYGQNHGGLKQNRID----NCQKAS--------GGYRESFS 142
N++ NP QN N G+ GQN L+QN N +S GYRE
Sbjct: 121 NLRNEFHRNPXGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNPRGYREYAR 180
Query: 143 SEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIYGESSRGFQQNSNEFYQHHAGVNSESHI 202
+E ++N ++GNF +YRQ G G N NE + ES I
Sbjct: 181 NEFEQNPFSQSGNFSRNYRQGSG---------------GLPANQNELCR-------ESTI 218
Query: 203 NEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVM 262
NE+Q N Q+GN N Y N G+ Q G N NVQN Y G EV
Sbjct: 219 NEYQQNLVGQSGNINGYCGQNYGE------SLQKSNDFYGQNRNVQNSY--YSEGRAEVN 270
Query: 263 QNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGH---------------YSGNFGIHQ 307
QNRNG Q SE+LG N ++ Q QQ+ SG+ Y N G +Q
Sbjct: 271 QNRNGNCQQIISETLGDLNRTYGENIRQFQQSPSGYHRENLQQYQPSENMYYRENVGQYQ 330
Query: 308 NSPSF-----------YQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQV 356
+P+ YQQ+ N QYQ + + QYQQNPN QYQ+ S QN M+ S
Sbjct: 331 QNPNVGQYQQNPNIGQYQQNPNVAQYQQNPNVAQYQQNPNVAQYQTNSNEFQNSMVGSPK 390
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
+N K + + EA+ SSQ +GTLE++D K+GKVKEAIEVLGLLEKQ VDLP + +L
Sbjct: 391 SSNYKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRL 450
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
M+ACG+AKAL+EAKAVHE + + +SPL+VSTYN IL+MYS+C SMDDA++VF M ER+L
Sbjct: 451 MKACGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNL 510
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
TSWDTMIT FAKN LGE+A+D+F QFK++GLKPD Q+FIGVF ACS LGDV+EGMLHF S
Sbjct: 511 TSWDTMITWFAKNDLGEEAIDLFIQFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNS 570
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
MSKDYGIVPSMKHY S+VDMLG++GYLDEALEF+EKMP+EP VDVWE LMN+CR+ GN+E
Sbjct: 571 MSKDYGIVPSMKHYASMVDMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNME 630
Query: 597 LGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG 656
+GDRCAE+VE L+PSRL E+SKAGLVPV AS+L KEKE KKLASQNLLEVRS+VHEYRAG
Sbjct: 631 IGDRCAELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAG 690
Query: 657 DTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLL 716
DTSHPE DKIYA +RGL+AQMKEAGY+PETRFVLHDIDQEGKEEALLAHSERLAV++GLL
Sbjct: 691 DTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLL 750
Query: 717 SSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
SSPAR+PIR++KNLRVCGDCH+ALKIISK+VGRELIIRDAKRFHHFKDGLCSCRDY
Sbjct: 751 SSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDY 806
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/640 (56%), Positives = 438/640 (68%), Gaps = 41/640 (6%)
Query: 156 FKGHYRQIDGYG-KQNSNGIYGESSRGFQQNSNEF-------YQHHAGVNSES------- 200
F G Y+ D G +QN G Y ES + +SNE Y A S
Sbjct: 44 FSGGYQNDDSSGYQQNRVGFYQESQN--KVDSNELLNKQRPDYVSQANAEQNSYGAGQIA 101
Query: 201 ---HINEFQN---NTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRSGGNAN-VQNQYGP 253
HIN QN N NG+ N Y N + + SG +AN + ++G
Sbjct: 102 DGGHINMTQNVHNNLVGYNGSVNGYFGQGNMRMQQKVRAGVGSAWGSGMHANPLVEKHGW 161
Query: 254 IHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFY 313
H PG+ MQ+ N + S R ES G+ G+ Q+ QQ + HY G+ + Q P
Sbjct: 162 THE-PGQKMQSPNAYGSPRPLESQGNLRGDLNQNIDHFQQPENVHYKGSHEMRQQYPG-- 218
Query: 314 QQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSS 373
Q+QQ+ +G+Y Q + S + NN H+ + +AS S
Sbjct: 219 --------------SGQFQQSLKDGRYLPNLNIAQRSGVGSHLSNNANHDGESDKASNDS 264
Query: 374 QNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH 433
TLE+LD EG VKEA+ VL LLEK I VDLP + QLM C + K+LEEAK VH
Sbjct: 265 PYRATLEELDNFCIEGNVKEAVNVLELLEKLHIPVDLPRYLQLMHQCAENKSLEEAKIVH 324
Query: 434 EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE 493
H + LSPL+VSTYN IL+MY EC S+DDA ++F+NM ER+LT+WDTMIT AKNG E
Sbjct: 325 RHTSQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAE 384
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
D++D+F+QFK GLKPD Q+FIGV ACS LGD+ EGMLHFESMSKDYGIVPSM H+VS+
Sbjct: 385 DSIDLFTQFKNLGLKPDGQMFIGVLFACSVLGDIDEGMLHFESMSKDYGIVPSMTHFVSV 444
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
VDM+GS G+LDEA EFIE+MPMEP + WE LMNLCR+HGN LGDRCAE+VEQLD SRL
Sbjct: 445 VDMIGSIGHLDEAFEFIERMPMEPSAETWETLMNLCRVHGNTGLGDRCAELVEQLDSSRL 504
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
NE+SKAGLVPV AS+L KEKE K LAS+NLLEVRS+V EYRAGDTSHPE DKIYAL+RGL
Sbjct: 505 NEQSKAGLVPVKASDLTKEKEKKNLASKNLLEVRSRVREYRAGDTSHPENDKIYALLRGL 564
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++QMKEAGY+PET+FVLHDIDQEGKEEALLAHSERLAV++GLL+SPARAP+R++KNLRVC
Sbjct: 565 KSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPARAPMRVIKNLRVC 624
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+ALKIISK+VGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 625 GDCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 664
>gi|296082000|emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/811 (49%), Positives = 494/811 (60%), Gaps = 173/811 (21%)
Query: 1 MSRSTASFLTIRSLTALSKV-SSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDS 59
MS A+ LTI SLTALSKV S +S S+KTL LLKNLSTA ER DFQ NG+ +++S
Sbjct: 1 MSAKRATLLTINSLTALSKVCPSPNSSSASSKTLTLLKNLSTAAERADFQISNGFQKENS 60
Query: 60 FQNDQHPNGFCTE-QSSVDFQQKPN-----------------------EHGLNPNGGFTE 95
+N Q+P+GF + Q+ ++FQQKPN + +NPNGGF E
Sbjct: 61 PENHQNPDGFDADNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPNGGFEE 120
Query: 96 RRVNDYWDNPLRQNGNC-GFYGQNHGGLKQNRID----NCQKAS--------GGYRESFS 142
N++ NP+ QN N G+ GQN L+QN N +S GYRE
Sbjct: 121 NLRNEFHRNPIGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNPRGYREYAR 180
Query: 143 SEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIYGESSRGFQQNSNEFYQHHAGVNSESHI 202
+E ++N ++GNF +YRQ G G N NE + ES I
Sbjct: 181 NEFKQNPFSQSGNFSRNYRQGSG---------------GLPANQNELCR-------ESTI 218
Query: 203 NEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVM 262
NE+Q N Q+GN N Y N G+ Q G N NVQN Y G EV
Sbjct: 219 NEYQQNLVGQSGNINGYCGQNYGE------SLQKSNDFYGQNRNVQNSY--YSEGRAEVN 270
Query: 263 QNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQY 322
QNRNG Q SE+LG N ++ Q QQ+ SG++ N
Sbjct: 271 QNRNGNCQQIISETLGDLNRTYGENIRQFQQSPSGYHRENL------------------- 311
Query: 323 QWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL 382
+QYQ P+E N M+ S +N K + + EA+ SSQ +GTLE++
Sbjct: 312 ------QQYQ--PSE-----------NIMVGSPKSSNYKPDGESLEAAESSQYSGTLEEV 352
Query: 383 DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
D K+GKVKEAIEVLGLLEKQ VDLP + +LM+ACG+AKAL+EAKAVHE + + +SP
Sbjct: 353 DDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSVSP 412
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L+VSTYN IL+MYS+C SMDDA++VF M ER+LTSWDTMIT FAKN LGE+A+D+
Sbjct: 413 LKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDL---- 468
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
KDYGIVPSMKHY S+VDMLG++GY
Sbjct: 469 ------------------------------------KDYGIVPSMKHYASMVDMLGNSGY 492
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
LDEALEF+EKMP+EP VDVWE LMN+CR+ GN+E+GDRCAE+VE L+PSRL E+SK
Sbjct: 493 LDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSK---- 548
Query: 623 PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
VRS+VHEYRAGDTSHPE DKIYA +RGL+AQMKEAGY
Sbjct: 549 -----------------------VRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGY 585
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+PETRFVLHDIDQEGKEEALLAHSERLAV++GLLSSPAR+PIR++KNLRVCGDCH+ALKI
Sbjct: 586 VPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKI 645
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+VGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 646 ISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 676
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/788 (48%), Positives = 494/788 (62%), Gaps = 72/788 (9%)
Query: 1 MSRSTASFLTIRSLTALSKVSSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDSF 60
M + A+ L RSL AL SS +S S K L L++NLS A ER + QN NGY+ D+S
Sbjct: 1 MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
Query: 61 QN-----------DQHPNGFCTEQSSVDFQQKPNEHGLNPNGGFTERRVNDYWDNPLRQN 109
+ +Q P + S Q +P++ L+ G +TE + L +
Sbjct: 61 PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILD--GFYTENSLQG-----LHRP 113
Query: 110 GNCGFYGQNHGGLKQNRIDNCQKASGGYRESFSSEQQRNIVGENGNFKGHYRQIDGYGKQ 169
YGQ GG N + AS Y + +S
Sbjct: 114 STSSVYGQKPGGSFANTSPMHESASRSYGQHYSG-------------------------- 147
Query: 170 NSNGIYGESSRGFQQNSNEFYQHHAGVNSESHINEFQNNTFQQNGNFNDYGWYNN-GQPH 228
+S GF QN +E Y+ E+ N + NGNF + G+ Q H
Sbjct: 148 -----VPPNSCGFNQNHHEAYR-------ETFQNTHHASPVAPNGNFIENGYKGGVAQDH 195
Query: 229 PNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDT 288
+ +G+ P+ N + + G M N + + + N + T
Sbjct: 196 NSYNGSTPR--------NFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYGYN-NEAT 246
Query: 289 GQHQQALSG---HYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSG 345
Q+ +SG H + G + + P Q +QN Q Q QY Q + QYQ +
Sbjct: 247 QQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQG--QYHQGSSVEQYQPNTD 304
Query: 346 NIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
QN M+ +Q+LNN ++ E + Q+ G LE+LD KEGK+KEA+++L +LEKQ
Sbjct: 305 TNQNSMIGTQLLNNVNANEEIGEP-KDCQDGGPLEKLDEFCKEGKLKEAVQILEVLEKQH 363
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I VDL + LM ACG+A++LEEAK V +V + + ++VSTYN IL+MYS+C SMDDA+
Sbjct: 364 IPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMDDAY 423
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
++F+ M R++TSWDTMIT AKNGLGEDA+D+F +FK+AGL+PD ++FIGVFSACS LG
Sbjct: 424 TIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACSVLG 483
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
D EGMLHFESM+K+YGI PSM HYVSIVDMLGS G++DEA+EFIEKMP+EP VD+WE +
Sbjct: 484 DADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIWETM 543
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLE 645
MN+ R HG +ELGDRC E+VE LD SRLNE+SKAGL+PV AS+L K + +KLA++NLLE
Sbjct: 544 MNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLXKREREEKLANRNLLE 603
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
VRS+VHEYRAGDTSHPE D+IY L+RGLR QMKEAGYIPETRFVLHDIDQE K +ALL H
Sbjct: 604 VRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGH 663
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SERLAV++GL+SS AR+PIR++KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG
Sbjct: 664 SERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 723
Query: 766 LCSCRDYW 773
LCSCRDYW
Sbjct: 724 LCSCRDYW 731
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/637 (55%), Positives = 432/637 (67%), Gaps = 35/637 (5%)
Query: 156 FKGHYRQIDGYG-KQNSNGIYGESSRGF-------QQNSNEFYQHHAGVNSES------- 200
F G Y+ D G +QN G Y ES +Q + Q +AG NS
Sbjct: 44 FSGGYQNDDSSGYQQNRVGFYLESQNKADSYELLNKQRPDYVSQANAGQNSYGAGQIADG 103
Query: 201 -HIN---EFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMSRSGGNANVQNQYGPIHY 256
HIN NN NG+ N Y + + + SG +AN +
Sbjct: 104 GHINVTRNVHNNLVGHNGSVNGYFGQGDMKMQQKVGAGVDNAWGSGMHANPFVEKHDWTQ 163
Query: 257 GPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQD 316
PG+ MQ+ N ++S ES G+ G+ Q+ QQ + HY G+ + P + Q
Sbjct: 164 EPGQGMQSPNAYSSPGPLESQGNLRGDLNQNIDHFQQPQNVHYKGSHEMRPQYPGYGQS- 222
Query: 317 QNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNN 376
QQ+ +GQY Q ++ S + +N + + A+AS S
Sbjct: 223 ---------------QQSLKDGQYLPNLNTAQRSVVGSHLSSNANPDGESAKASNDSPYR 267
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
GTLE+LD EG VKEA+EVL LLEK I VDLP + QLM CG+ K+LEEAK VH H
Sbjct: 268 GTLEELDNFCIEGNVKEAVEVLELLEKLDIPVDLPRYLQLMHQCGENKSLEEAKNVHRHA 327
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
+ LSPL+VSTYN IL+MY EC S+DDA ++F+NM ER+LT+WDTMIT AKNG ED++
Sbjct: 328 LQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAEDSI 387
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
D+F+QFK GLKPD Q+FIGV AC LGD+ EGM HFESM+KDYGIVPSM H+VS+VDM
Sbjct: 388 DLFTQFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVVDM 447
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
+GS G+LDEA EFIEKMPM+P D+WE LMNLCR+HGN LGD CAE+VEQLD S LNE+
Sbjct: 448 IGSIGHLDEAFEFIEKMPMKPSADIWETLMNLCRVHGNTGLGDCCAELVEQLDSSCLNEQ 507
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
SKAGLVPV AS+L KEKE + L ++NLLEVRS+V EYRAGDT HPE+DKIYAL+RGL++Q
Sbjct: 508 SKAGLVPVKASDLTKEKEKRTLTNKNLLEVRSRVREYRAGDTFHPESDKIYALLRGLKSQ 567
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MKEAGY+PET+FVLHDIDQEGKEEALLAHSERLA+++GLL+SPARAP+R++KNLRVCGDC
Sbjct: 568 MKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAIAYGLLNSPARAPMRVIKNLRVCGDC 627
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+ALKIISK+VGRELIIRDAKRFHHF DGLCSCRDYW
Sbjct: 628 HTALKIISKLVGRELIIRDAKRFHHFNDGLCSCRDYW 664
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/777 (49%), Positives = 485/777 (62%), Gaps = 110/777 (14%)
Query: 1 MSRSTASFLTIRSLTALSKVSSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDSF 60
M + A+ L RSL AL SS +S S K L L++NLS A ER + QN
Sbjct: 1 MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQND--------- 51
Query: 61 QNDQHPNGFCTEQSSVDFQQKPNEHGLNPNGGFTERRVNDYWDNPLRQNGNCGFYGQNHG 120
NG+ + S +Q +GG V+ Y +P G+Y Q+H
Sbjct: 52 ------NGYHADNSLPSYQT---------HGG----SVSSYNQSP-------GYY-QHHA 84
Query: 121 GLKQNRIDNCQKASGGYRESFSSEQQRNIVGENGNFKGHYRQIDGYGKQNS-NGIYGESS 179
+S SS+ + H +DG+ +NS G++ S+
Sbjct: 85 ------------------QSTSSQS-----------RPHQDILDGFYTENSLQGLHRPST 115
Query: 180 RGFQQNSNEFYQHHAGVNSESHINEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMS 239
S+ + Q G F N + YG + +G P PN G + S
Sbjct: 116 ------SSVYGQKPGG--------SFANTSPMHESASRSYGQHYSGVP-PNSCGCGSKRS 160
Query: 240 RSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSG-- 297
S N G E+ NG+ G + T Q+ +SG
Sbjct: 161 MSQNN----------QLGHREIFSAYNGY-------------GYNNEATQQNNYGVSGQN 197
Query: 298 -HYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQV 356
H + G + + P Q +QN Q Q QY Q + QYQ + QN M+ +Q+
Sbjct: 198 LHDNPMSGPNNHIPLSRQYEQNSIPLQHPQG--QYHQGSSVEQYQPNTDTNQNSMIGTQL 255
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
LNN ++ E + Q+ G LE+LD KEGK+KEA+++L +LEKQ I VDL + L
Sbjct: 256 LNNVNANEEIGEP-KDCQDGGPLEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDL 314
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
M ACG+A++LEEAK V +V + + ++VSTYN IL+MYS+C SMDDA+++F+ M R++
Sbjct: 315 MNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNI 374
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
TSWDTMIT AKNGLGEDA+D+F +FK+AGL+PD ++FIGVFSACS LGD EGMLHFES
Sbjct: 375 TSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFES 434
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
M+K+YGI PSM HYVSIVDMLGS G++DEA+EFIEKMP+EP VD+WE +MN+ R HG +E
Sbjct: 435 MTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLME 494
Query: 597 LGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG 656
LGDRC E+VE LD SRLNE+SKAGL+PV AS+L KE+E KKLA++NLLEVRS+VHEYRAG
Sbjct: 495 LGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAG 554
Query: 657 DTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLL 716
DTSHPE D+IY L+RGLR QMKEAGYIPETRFVLHDIDQE K +ALL HSERLAV++GL+
Sbjct: 555 DTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLI 614
Query: 717 SSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SS AR+PIR++KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 615 SSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 671
>gi|49533766|gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
Length = 741
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 375/806 (46%), Positives = 493/806 (61%), Gaps = 98/806 (12%)
Query: 1 MSRSTASFLTIRSLTALSKVSSSLTSCDSTKTLYLLKNLSTAIERFDFQNPNGYYEDDSF 60
M RS A+ LT +SL LSKVS +S K + ++++STA + + N
Sbjct: 1 MYRSRATILTSKSLRTLSKVSRQSLHLESLKFVTFVRSISTATQISEIDN---------- 50
Query: 61 QNDQHPNGFCTEQSSVDFQQKPNEHGLNPNGGFTERRVNDYWDNPLRQNGNCGFYGQNHG 120
+ +++ DFQQ NP+G F N N L
Sbjct: 51 ------HSELKGENNSDFQQ-------NPDGDFNYNSNNTVSLNKL-------------- 83
Query: 121 GLKQNRIDNCQKASGGYRESFSSEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIYGESSR 180
N Q Y + S R+ G G++ G+ R+I+ QN +G+ + R
Sbjct: 84 --------NWQDQEWAYNQQLS----RSTEG-GGSYSGNSRRIE----QNPSGVNPQKPR 126
Query: 181 ----------GFQQN---SNEFYQHHAGVNSESHINEFQ-----NNTFQQNGNFNDYGWY 222
GFQQN NE + +G S NEFQ NN F+ ++ +
Sbjct: 127 TEFHEQKDTKGFQQNLYARNENFS--SGYVDVSSRNEFQQTVGRNNDFRSRKDYQSNLVH 184
Query: 223 NNGQPHPNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNG 282
N S + SR G Q ++ G QN NG NS+ S +F+G
Sbjct: 185 NRNDSGGENSSNLLRSSRFEGGLEAQPSQNGVY---GHYQQNLNGGNSE---TSRQNFSG 238
Query: 283 NCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQ-------SRRQ---YQ 332
N + G QQ LS + GN Q+ S + QN Y ++ SR YQ
Sbjct: 239 NYTSNGGVPQQNLSNYDPGNVRNVQSENS-EKYPQNASGYNMERHTNSSGYSREMMGLYQ 297
Query: 333 QN-----PNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK 387
QN P+ +Q+ S QNG++ Q + + + ++ SS G++++LD L K
Sbjct: 298 QNLSGFNPSSAGHQA-SYQYQNGIVGHQEMRSSTPVEQSIDSDDSSSKKGSVDELDDLCK 356
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
EGKVKEA+EVL LL++Q ++VDL + LM C + K+LE+AK++HEH+ R L +
Sbjct: 357 EGKVKEAVEVLQLLDQQHVTVDLSRYIMLMDVCSEDKSLEDAKSIHEHLVRSHPHLDIKM 416
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
YN IL+MY +C SM DAF VF M +R+LTSWDTMIT KNGLGEDA+++F +FK+ G+
Sbjct: 417 YNKILEMYGKCGSMKDAFLVFRKMPQRNLTSWDTMITWLGKNGLGEDAIELFGEFKETGM 476
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KPD Q+F+GVF ACS +GD+VEGMLHFESMSKDY I SM+ YV +VDMLGSTGYLDEA+
Sbjct: 477 KPDGQMFLGVFHACSVVGDIVEGMLHFESMSKDYDIDLSMEQYVGVVDMLGSTGYLDEAM 536
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
EFIE+MP+EP ++VWE +MNLCR+HGNLELGDRCAEIVE LDPSRL+E+SKAG + V AS
Sbjct: 537 EFIERMPIEPSIEVWETMMNLCRIHGNLELGDRCAEIVELLDPSRLDEQSKAGFLAVKAS 596
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
++AKEKE KK ++Q+LLE RSKVHEYRAGD SHP+ +KIYAL+RGL+ MKE GYIPET+
Sbjct: 597 DIAKEKE-KKRSAQSLLEARSKVHEYRAGDRSHPDHEKIYALLRGLKQLMKEDGYIPETK 655
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
FVLHD+DQE KE+AL+AHSERLA + GL++S AR+PIRI+KNLRVCGDCH+ALKI SK+V
Sbjct: 656 FVLHDVDQETKEDALMAHSERLAFAQGLMNSSARSPIRIIKNLRVCGDCHNALKIASKLV 715
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
GRE+I+RDAKRFHH KDGLCSCRDYW
Sbjct: 716 GREIIMRDAKRFHHLKDGLCSCRDYW 741
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/461 (64%), Positives = 354/461 (76%), Gaps = 28/461 (6%)
Query: 263 QNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSG-HYSGNFGIHQNSPSFYQQDQNGGQ 321
QN G+ Q FS GS+ + + QH L +Y+GN G++ PS+
Sbjct: 105 QNSGGY--QNFS---GSYRESWNNNYTQHVNQLPPPYYAGNVGMY--PPSY--------- 148
Query: 322 YQWDQSRRQYQQN---PNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGT 378
+ QYQQN N GQY S S ++QN M+AS V NN K EDD AE SS GT
Sbjct: 149 ----GAAAQYQQNLSVVNAGQYMSNSNDVQNVMVASGVSNNPKVEDDLAE---SSSYRGT 201
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
LE+LD L KE KVKEA+EVL LLE++ + VDLP F QLM+ CG+AKA EEAK VH+H+ R
Sbjct: 202 LEELDELCKEKKVKEAVEVLNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHDHLVR 261
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L SPL VST+N IL+MY +C MD AF+VF+ M +R+LT+WDTMI AKNGLGEDA+D+
Sbjct: 262 LQSPLAVSTFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDL 321
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FSQFKQAGL PD Q+FIGVFSAC +GDV+EGMLHFESM KDYGIVPSM+H+VSIVDMLG
Sbjct: 322 FSQFKQAGLVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDMLG 381
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+ G+LDEALEFIEKMPMEP +DVWE LMNL R+HGNLELGDRCA++VE LD S LNE+SK
Sbjct: 382 TIGHLDEALEFIEKMPMEPSIDVWESLMNLSRIHGNLELGDRCAKLVELLDASHLNEQSK 441
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
AGLVP S L KEK+ KK ASQNLLEVRS+VHEYRAGDTSHPETD+IYA++RGLRAQMK
Sbjct: 442 AGLVPAKVSNLTKEKD-KKPASQNLLEVRSRVHEYRAGDTSHPETDRIYAMLRGLRAQMK 500
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP 719
E GYIPETRFVLHD+DQE KE+ALL+HSERLA ++GLL+SP
Sbjct: 501 EHGYIPETRFVLHDVDQECKEDALLSHSERLAAAYGLLTSP 541
>gi|357487235|ref|XP_003613905.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515240|gb|AES96863.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 768
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/391 (67%), Positives = 320/391 (81%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+LD EG+VKEAI+VL +LEK I VDL +LMQ CG K+LEEAK VH +V +
Sbjct: 307 IEELDSSCMEGEVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQ 366
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LSPL+VST NGIL+MY +C S+DDA +VF NMTERDLT+ MI AKNG ED++D+
Sbjct: 367 HLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDL 426
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F+QFK++GLKPD Q+FIGVF ACS LGD+VEGMLHFESMS+DY IVP+M+HYVS+VDM+G
Sbjct: 427 FTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEHYVSLVDMIG 486
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
S G+LDEALEFIEKMPMEP V+VWE LMN CR+HGN ELGDRCAE+VE+LDPSRLNEKSK
Sbjct: 487 SIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSK 546
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
GL+ + S++ K K+ K N + +++HEYRAGDTS PE + IY L+R LR QMK
Sbjct: 547 VGLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYVLLRRLRVQMK 606
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGYI ETRF LHD+DQE KE+ALL HSERLA++ GLL+SPAR+ IR++KNLRVCGDCH+
Sbjct: 607 EAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDCHT 666
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
ALKIIS +VGRE IIRDAKRFHHFK+GLCSC
Sbjct: 667 ALKIISDLVGREFIIRDAKRFHHFKNGLCSC 697
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 131/285 (45%), Gaps = 35/285 (12%)
Query: 254 IHYGPGEVMQN---RNGFNSQRFSESLGSFNGNCMQDTGQ------HQQALSGHYSGNFG 304
I+YG G+ N +L NG+ +D GQ H+ + S FG
Sbjct: 82 IYYGSGQTAHGGHVNNNITQNVVQNNLAEHNGSVNEDFGQRNFKMQHKVGVGVDNSRGFG 141
Query: 305 IHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQ------YQSYSGNIQNGMMASQVLN 358
+H SF ++ W + + PN YQ + GN+ + Q
Sbjct: 142 MHPYG-SF-------ERHNWRLESGETMKYPNSHSLLRPIDYQGHHGNLTQNLGRWQQAR 193
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQ 418
N +++ S+ + L++LD + KEG+VK+AI VL LEK VDL +LMQ
Sbjct: 194 NSDNQN-------SASDTDKLKKLDEVCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLMQ 246
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS--NMTERDL 476
CG A+ LEEAK VH +V + LSPL V T IL+MY +C S+DDA +VF NMTER L
Sbjct: 247 LCGKAEFLEEAKVVHIYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKL 306
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ G ++A+D+ ++ + D + + C
Sbjct: 307 IEE---LDSSCMEGEVKEAIDVLQVLEKFHILVDLDRCLRLMQQC 348
>gi|115439809|ref|NP_001044184.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|20160509|dbj|BAB89460.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113533715|dbj|BAF06098.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|125571952|gb|EAZ13467.1| hypothetical protein OsJ_03384 [Oryza sativa Japonica Group]
gi|215704215|dbj|BAG93055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 796
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 247/402 (61%), Positives = 320/402 (79%), Gaps = 3/402 (0%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
S ++ T+E++D L ++GKVKEA+E+L LL+++ V P + +LMQACGDA +L EA+
Sbjct: 398 SGESKVTVEEMDKLCEDGKVKEAVELLALLQEEGTVVHAPQYFKLMQACGDATSLAEARK 457
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+H + + + N IL+MY++C SM+DA +F+ + +R+L SW+T+I+GF NGL
Sbjct: 458 IHNQISQSALAVDTDINNKILEMYAKCGSMEDAKKLFNTIAQRNLASWNTIISGFVYNGL 517
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
G++A D F QFKQ G KPD +F VF AC LG V EGMLHFESM KD+G+ P+M+HYV
Sbjct: 518 GDEATDFFDQFKQTGNKPDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYV 577
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
SIV+MLG +GY+DEA EF+E+MP+EP +DVWE LMN+CR++G LELG+RCA+IVE+LD S
Sbjct: 578 SIVNMLGQSGYIDEACEFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSS 637
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
RLN++SK GL PV+ASELAKEKE KK N +E RSKVHEYRAGD SHPE KIY +R
Sbjct: 638 RLNDQSKIGLFPVDASELAKEKERKKA---NAVEARSKVHEYRAGDRSHPEHLKIYEELR 694
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L A MKEAGYI +TRFVLHD+DQE KE+ALLAHSERLAVS+GL++S AR+PIR++KNLR
Sbjct: 695 YLAAHMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLR 754
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ALKIISK+VGR +I RDAKRFHHF++G+CSC+DYW
Sbjct: 755 SCGDCHTALKIISKLVGRLIIARDAKRFHHFENGVCSCKDYW 796
>gi|357130926|ref|XP_003567095.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Brachypodium distachyon]
Length = 771
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/398 (63%), Positives = 315/398 (79%), Gaps = 6/398 (1%)
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
GT+E+L+ L ++GKVKEA+EVL +L+++ I + P + +LMQAC DA AL EA+ +H +
Sbjct: 379 GTIEELEKLCEDGKVKEALEVLPVLQEKGIVLHAPQYIKLMQACPDASALAEARKIHNEI 438
Query: 437 ERLLSPLRVSTYNG-ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
R S L + N IL MY++C SM+DA ++FS M + D TSW T+I+GF NGLGE+A
Sbjct: 439 SR--SGLADTVINNKILDMYAKCASMEDAKNLFSTMPQHDATSWSTIISGFVDNGLGEEA 496
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
D F QFKQ G KPD +F VF AC LG V EGMLHFESM KD+GI P+M HY SIV
Sbjct: 497 TDFFDQFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPAMDHYASIVS 556
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
MLG +GYLDEA EFIE+MP+EP +DVWE LMN+CR++G++ELGDRCA+I+E LDPSRLNE
Sbjct: 557 MLGQSGYLDEAREFIERMPVEPSIDVWESLMNMCRLNGSMELGDRCAQIIECLDPSRLNE 616
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+SK GL P+NAS+LAKEKE KK N +E RSKVHEYRAGD SHPET +IY +R L A
Sbjct: 617 QSKMGLFPINASDLAKEKERKKA---NSVEARSKVHEYRAGDRSHPETFRIYEELRYLSA 673
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
MKEAGYI +TRFVLHD+DQE KE+ALLAHSERLAVS+GL++S R+PIR++KNLR CGD
Sbjct: 674 HMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAVRSPIRVIKNLRSCGD 733
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A KIISK+VGR++I RDAKRFHHF++G+CSC DYW
Sbjct: 734 CHTAFKIISKLVGRQIIARDAKRFHHFENGVCSCNDYW 771
>gi|125527635|gb|EAY75749.1| hypothetical protein OsI_03662 [Oryza sativa Indica Group]
Length = 796
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 246/396 (62%), Positives = 317/396 (80%), Gaps = 3/396 (0%)
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
T+E++D L ++GKVKEA+E+L LL+++ +V P + +LMQACGDA +L EA+ +H +
Sbjct: 404 TVEEMDKLCEDGKVKEAVELLALLQEEGTAVHAPQYFKLMQACGDATSLAEARKIHNQIS 463
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ + N IL+MY++C SM+DA +F+ + +R+L SW+TMI+GF NGLG++A D
Sbjct: 464 QSALAVDTDINNKILEMYAKCGSMEDAKKLFNTIAQRNLASWNTMISGFVYNGLGDEATD 523
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
F QFKQ G K D +F VF AC LG V EGMLHFESM KD+G+ P+M+HYVSIV+ML
Sbjct: 524 FFDQFKQTGNKSDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIVNML 583
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G +GY+DEA EF+E+MP+EP +DVWE LMN+CR++G LELG+RCA+IVE+LD SRLN++S
Sbjct: 584 GQSGYIDEAREFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLNDQS 643
Query: 618 KAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
K GL PV+ASELAKEKE KK N +E RSKVHEYRAGD SHPE KIY +R L A M
Sbjct: 644 KIGLFPVDASELAKEKERKKA---NAVEARSKVHEYRAGDRSHPEHLKIYEELRYLAAHM 700
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
KEAGYI +TRFVLHD+DQE KE+ALLAHSERLAVS+GL++S AR+PIR++KNLR CGDCH
Sbjct: 701 KEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCH 760
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ALKIISK+VGR +I RDAKRFHHF++G+CSC+DYW
Sbjct: 761 TALKIISKLVGRLIIARDAKRFHHFENGVCSCKDYW 796
>gi|326524400|dbj|BAK00583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/402 (62%), Positives = 314/402 (78%), Gaps = 3/402 (0%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
S + GT+E+LD L ++G +KEA+E L +L+ + I + P + +LMQAC DA AL EA+
Sbjct: 65 SGISKGTIEELDKLCEDGNIKEALEALPVLQGKGIVLHAPQYFKLMQACADASALAEARQ 124
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+H + + + + N IL MY++C SM+DA +FS M + DLTSW T+I+GF NGL
Sbjct: 125 IHNQISQSELAVDIDVNNKILDMYAKCASMEDAKKLFSTMAQHDLTSWSTIISGFVHNGL 184
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
GE+A D F +FKQ G KPD +F VF AC LG V EGMLHFESM KD+GI PS+ HY
Sbjct: 185 GEEATDFFDRFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPSVDHYA 244
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
SIV+MLG +GY+DEA EFIE+MP EP VD+WE LMN+CR++G LELGDRCA+I+E+LDPS
Sbjct: 245 SIVNMLGQSGYVDEAREFIERMPTEPSVDIWESLMNMCRLNGYLELGDRCAQIIERLDPS 304
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
RLNE+SK GL PVNAS+LAKEKE KK N E RSKVHEYRAGD SHPET KIY +R
Sbjct: 305 RLNEQSKTGLFPVNASDLAKEKERKK---ANTAEARSKVHEYRAGDRSHPETLKIYEELR 361
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L A MKEAGYI +TRFVLHD+D E KE+ALLAHSERLAVS+GL++S AR+PIR++KNLR
Sbjct: 362 YLAAHMKEAGYIADTRFVLHDVDPETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLR 421
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ALKIISK+VGR++I RDAKRFHHF++GLCSC+DYW
Sbjct: 422 SCGDCHTALKIISKLVGRQIIARDAKRFHHFENGLCSCKDYW 463
>gi|224128233|ref|XP_002320276.1| predicted protein [Populus trichocarpa]
gi|222861049|gb|EEE98591.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 250/348 (71%), Positives = 297/348 (85%), Gaps = 12/348 (3%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
LEEA+ +H+ + R SPL V T N IL+MYS+C +MD+AFSVF NM E +LTSW MIT
Sbjct: 1 LEEARVIHDCIVRSQSPLDVGTLNKILEMYSKCGAMDEAFSVFDNMQECNLTSWYIMITW 60
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
AKNG GEDA+D+F+QFKQ GLKPD QIF+GVFSAC+ LGD+ EG+LHFESM K++ IVP
Sbjct: 61 LAKNGYGEDAIDLFNQFKQGGLKPDAQIFVGVFSACNVLGDINEGLLHFESMWKEFSIVP 120
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
SM+HYVSIVDMLGS GYL EALEFIEKMPMEP VDVWE LMNLCR HG+LELGDRCAE++
Sbjct: 121 SMEHYVSIVDMLGSNGYLVEALEFIEKMPMEPSVDVWETLMNLCRAHGHLELGDRCAELI 180
Query: 606 EQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
EQLDPSRLNE+S AGLVP KK ASQNLL+VRS+VHEYRAGDTS P+ D+
Sbjct: 181 EQLDPSRLNEQSNAGLVP------------KKTASQNLLDVRSRVHEYRAGDTSFPDRDR 228
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
+YAL+RG++AQMK+AGYIP TRFVLHDID+E KE+ALLAHSERLA +HGLL++ AR+P+R
Sbjct: 229 VYALLRGMKAQMKDAGYIPVTRFVLHDIDEESKEDALLAHSERLATAHGLLTTAARSPLR 288
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++KNLR CGDCH+A+KIISK+VGR+LI+RDAKRFHHFKDG+CSC DYW
Sbjct: 289 VVKNLRFCGDCHNAMKIISKLVGRQLIMRDAKRFHHFKDGVCSCGDYW 336
>gi|358347047|ref|XP_003637574.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503509|gb|AES84712.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 753
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/391 (65%), Positives = 310/391 (79%), Gaps = 15/391 (3%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+LD EG+VKEAI+VL +LEK +PT K+LEEAK VH +V +
Sbjct: 307 IEELDSSCMEGEVKEAIDVLQVLEK----FHIPT-----------KSLEEAKVVHRYVLQ 351
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LSPL+VST NG+L+MY +C S+DDA SVF NM +RDLT+ MI AKNG ED++D+
Sbjct: 352 HLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMIKQLAKNGFAEDSIDL 411
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F+QFK++GLKPD Q+FIGVF ACS LGD+VEGMLHFESMS+DY IVP+M HYVS+VDM+G
Sbjct: 412 FTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDMIG 471
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
S G LDEALEFIEKMPMEP V+VWE LMN CR+HGN ELGDRCAE+VE+LDPSRLNEKSK
Sbjct: 472 SIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSK 531
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
L+ + S++ K K+ K N + +++HEYRAGDTS PE + IYAL+R LR QMK
Sbjct: 532 VCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQMK 591
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGYI ETRF LHD+DQE KE+ALL HSERLA++ GLL+SPAR+ IR++KNLRVCGDCH+
Sbjct: 592 EAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDCHT 651
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
ALKIIS +VGRE IIRDAKRFHHFK+GLCSC
Sbjct: 652 ALKIISDLVGREFIIRDAKRFHHFKNGLCSC 682
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 168/386 (43%), Gaps = 65/386 (16%)
Query: 254 IHYGPGEVMQN---RNGFNSQRFSESLGSFNGNCMQDTGQ------HQQALSGHYSGNFG 304
I+YG G+ N +L NG+ +D GQ H+ + S FG
Sbjct: 82 IYYGSGQTAHGGHVNNNITQNVVQNNLAEHNGSVNEDFGQRNFKMQHKVGVGVDNSRGFG 141
Query: 305 IHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEG------QYQSYSGNI-QNGMMASQVL 357
+H SF ++ W + + PN +YQ + N+ QN Q
Sbjct: 142 MHPYG-SF-------ERHNWRLESGETMKYPNSHSLLTPIEYQGHHENLTQNRGRWQQAR 193
Query: 358 NNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
N ++ S+ + G L+ LD KEG+VK+AI VL LEK VDL +LM
Sbjct: 194 N--------SDTQNSASDTGKLKNLDEFCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLM 245
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS--NMTERD 475
Q CG A+ LEEAK VH +V + LSPL V T IL+MY +C S+DDA +VF NMTER
Sbjct: 246 QLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERK 305
Query: 476 LTSW--DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF----------SACSA 523
L + + G K + D + + +F ++ + + S C+
Sbjct: 306 LIEELDSSCMEGEVKEAI--DVLQVLEKFHIPTKSLEEAKVVHRYVLQHLSPLKVSTCNG 363
Query: 524 L-------GDVVEGMLHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP- 574
L G V + + F++M +D + M + L G+ +++++ +
Sbjct: 364 LLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIM------IKQLAKNGFAEDSIDLFTQFKR 417
Query: 575 --MEPDVDVWEKLMNLCRMHGNLELG 598
++PD ++ + C M G++ G
Sbjct: 418 SGLKPDGQMFIGVFGACSMLGDIVEG 443
>gi|242054359|ref|XP_002456325.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
gi|241928300|gb|EES01445.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
Length = 763
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/693 (43%), Positives = 415/693 (59%), Gaps = 78/693 (11%)
Query: 107 RQNGNCGFYG--QNHGGLKQNRIDNCQKASGGYRESFSSEQQRNIVGENGNFKGHYRQID 164
R G+ GF Q + G + N + AS YR + QQ G +G F +Q +
Sbjct: 123 RSGGSYGFRNSHQPYTGARANNETSGYNASQPYRGGGAYSQQ----GLDGYFPNDRQQYN 178
Query: 165 GYGKQNSNGIYGESSRGFQQNSNEFYQHHAGVNSESHINEFQNNTFQQNGNFNDYGWYNN 224
G +N Y S G+ SN+ GVN + YG+ +
Sbjct: 179 G---TEANSTY---SSGYNTQSNQKVYEREGVN------------------YGQYGYGPS 214
Query: 225 GQPHPNLSGAQPQMSRSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNC 284
GQ PN G N ++Q Q + + +R+G + + + +
Sbjct: 215 GQACPN---------PIGNNHHIQKQ---------QYVDHRSG---ESYPDRSRNHPSQY 253
Query: 285 MQDTGQHQQALSGHYSGN---FGIHQN----SPSFYQQ-DQNGGQYQWDQSRRQYQQNPN 336
+ T H++ ++G GN FG + + SP F +Q D + + Q P+
Sbjct: 254 VNPTHFHKEHVAGFQQGNNSNFGYNASQSYQSPHFNRQADMHSTPQGYSMYLNTDVQRPS 313
Query: 337 EGQYQSYSGNIQNGMMASQVLNNCKHED----------------DFAEASRSSQNNGTLE 380
G +Q + Q+ LNN HED + ++ GT+E
Sbjct: 314 HGVHQEKHSHAQSAGSFGNHLNNAPHEDGKYHQSLQGNFSNVGLPYEVPKAVGKHKGTVE 373
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L+ ++G VKEA+EVL +L++ I + P + +LMQACGDA AL EA+ +H +
Sbjct: 374 ELEKFCEDGNVKEALEVLAMLKENRIVLHPPQYFRLMQACGDAAALSEARLIHSQISESS 433
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + N ILKMY++C SM+DA +FS+M +LTSW TMI+GF N LGE+A+D F
Sbjct: 434 TVVDTDFQNEILKMYAKCGSMEDAKKLFSSMDHHNLTSWSTMISGFVHNTLGEEAIDFFD 493
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+FKQ G KPD +F VF AC LG V EGMLHFESM KD+GI P+M+HY SI+ MLG +
Sbjct: 494 RFKQTGDKPDLGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTMEHYASIISMLGQS 553
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
GY+ EA EF+E+MP+EP ++VWE LMN+CR++G LELGDRCA+I+E+LD SRLNE+SK G
Sbjct: 554 GYIAEAYEFVEQMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIERLDSSRLNEQSKMG 613
Query: 621 LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
L PV+AS+LAKEKE KK + + E RSKVHEYRAGD SHP+T KIY +R L A MKEA
Sbjct: 614 LFPVDASDLAKEKERKKAS---VAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHMKEA 670
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GYI +TRFVLHD+DQE KE+ALLAHSERLA+S+GL++S R+PIR++KNLR CGDCH+A
Sbjct: 671 GYIADTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAF 730
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIISK+VGR++I RDAKRFHHF++G+CSC+DYW
Sbjct: 731 KIISKLVGRQIIARDAKRFHHFENGVCSCKDYW 763
>gi|358345888|ref|XP_003637006.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355502941|gb|AES84144.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 679
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/391 (65%), Positives = 310/391 (79%), Gaps = 15/391 (3%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+LD EG+VKEAI+VL +LEK +PT K+LEEAK VH +V +
Sbjct: 233 IEELDSSCMEGEVKEAIDVLQVLEK----FHIPT-----------KSLEEAKVVHRYVLQ 277
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LSPL+VST NG+L+MY +C S+DDA SVF NM +RDLT+ MI AKNG ED++D+
Sbjct: 278 HLSPLKVSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMIKQLAKNGFAEDSIDL 337
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F+QFK++GLKPD Q+FIGVF ACS LGD+VEGMLHFESMS+DY IVP+M HYVS+VDM+G
Sbjct: 338 FTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDMIG 397
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
S G LDEALEFIEKMPMEP V+VWE LMN CR+HGN ELGDRCAE+VE+LDPSRLNEKSK
Sbjct: 398 SIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSK 457
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
L+ + S++ K K+ K N + +++HEYRAGDTS PE + IYAL+R LR QMK
Sbjct: 458 VCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQMK 517
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGYI ETRF LHD+DQE KE+ALL HSERLA++ GLL+SPAR+ IR++KNLRVCGDCH+
Sbjct: 518 EAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDCHT 577
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
ALKIIS +VGRE IIRDAKRFHHFK+GLCSC
Sbjct: 578 ALKIISDLVGREFIIRDAKRFHHFKNGLCSC 608
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 115/242 (47%), Gaps = 34/242 (14%)
Query: 254 IHYGPGEVMQN---RNGFNSQRFSESLGSFNGNCMQDTGQ------HQQALSGHYSGNFG 304
I+YG G+ N +L NG+ +D GQ H+ + S FG
Sbjct: 8 IYYGSGQTAHGGHVNNNITQNVVQNNLAEHNGSVNEDFGQRNFKMQHKVGVGVDNSRGFG 67
Query: 305 IHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEG------QYQSYSGNI-QNGMMASQVL 357
+H SF ++ W + + PN +YQ + N+ QN Q
Sbjct: 68 MHPYG-SF-------ERHNWRLESGETMKYPNSHSLLTPIEYQGHHENLTQNRGRWQQAR 119
Query: 358 NNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
N ++ S+ + G L+ LD KEG+VK+AI VL LEK VDL +LM
Sbjct: 120 N--------SDTQNSASDTGKLKNLDEFCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLM 171
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS--NMTERD 475
Q CG A+ LEEAK VH +V + LSPL V T IL+MY +C S+DDA +VF NMTER
Sbjct: 172 QLCGKAEFLEEAKVVHRYVLQHLSPLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERK 231
Query: 476 LT 477
L
Sbjct: 232 LI 233
>gi|414880613|tpg|DAA57744.1| TPA: pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 763
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 320/756 (42%), Positives = 436/756 (57%), Gaps = 103/756 (13%)
Query: 69 FCTEQSSVDFQQKPNEHGLNPNGGFTERRVNDYWDNPLRQNGNCGFYGQNHGGLKQNRID 128
F +E++ D+Q+ E G N G +T+ R N G N L+ R
Sbjct: 60 FASERTDEDYQR---EWGQNKAGSYTDSRWN----------------GSN---LQLQRDV 97
Query: 129 NCQKASGGYRESFSSEQQRNIVGENGNFKGHYRQIDGYGKQNSNGIY-GESSRGFQQNSN 187
++ G + + + + G G+ + HYR YG QN++ Y G + + N++
Sbjct: 98 TSAGSTTG------THKNKGVDGVGGSSEQHYRSGGSYGFQNNHQPYTGTRANNERYNAS 151
Query: 188 EFYQHHAGVNSESHINEFQNNTFQQNG-------------------------NFNDYGWY 222
+ Y+ + + F N+ Q NG N YG+
Sbjct: 152 QPYRGSGPYSQQGLDGHFSNDRQQYNGTEANSTYSSGYYTQSKQKIYEGEGANNGQYGYG 211
Query: 223 NNGQPHPNLSGAQPQMS-------RSGGN-----ANVQNQY-GPIHYGPGEVMQNRNGFN 269
+GQP PN G ++ RSGG+ + +QY P H V + G N
Sbjct: 212 PSGQPCPNPVGNSQRVQKQQYVDHRSGGSYPDRSGHHPSQYVNPTHSRKEHVAGFQQGNN 271
Query: 270 SQ---RFSESLGSFNGNCMQDTGQHQQALSGHYSGNF-----GIHQNSPSFYQQDQNGGQ 321
S S++ S DT Q S + + + G+HQ S Q + G
Sbjct: 272 SNFGYNASQAYQSPYFTRQADTHSTSQGYSMYLNTDVQRLSHGVHQEKHSHAQSAGSFGN 331
Query: 322 YQWDQSRRQYQQNPNE-GQY-QSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTL 379
+ P+E G+Y QS GN N +V + S++ T+
Sbjct: 332 H--------VNSAPHEYGKYHQSLQGNPSNVGSPYEVPSEA-----------GSKHKCTV 372
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
E+L+ +G VKEA+EVL +L++ I + P + +LMQACGDA AL EA+ +H +
Sbjct: 373 EELEKFCDDGNVKEALEVLAMLKENRIVLHAPQYFRLMQACGDATALSEARLIHSQISE- 431
Query: 440 LSPLRVST--YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
S L V T N I++MY+ C SM+DA +FS+M +LTSW+TMI+GF N LGE+A+D
Sbjct: 432 -SSLTVDTDFQNKIMEMYARCGSMEDAKKIFSSMDHHNLTSWNTMISGFVHNVLGEEAID 490
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
F +FKQ G KPD +F VF AC LG V EGMLHFESM KD+GI P+ +HY SIV ML
Sbjct: 491 FFERFKQTGDKPDHGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTTEHYASIVTML 550
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G +GY+ EA EF+E+MP+EP ++VWE LMN+CR++G LELGDRCA+I+E LD SRLNE+S
Sbjct: 551 GQSGYIVEAYEFVERMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIECLDSSRLNEQS 610
Query: 618 KAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
K GL PV+ S+LAKEKE KK + + E RSKVHEYRAGD SHP+T KIY +R L A M
Sbjct: 611 KMGLFPVDVSDLAKEKERKKAS---VAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHM 667
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
KEAGYI +TRFVLHD+DQE KE+ALLAHSERLA+S+GL++S R+PIR++KNLR CGDCH
Sbjct: 668 KEAGYIADTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCH 727
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A KIISK+VGR++I RDAKRFHHF++G+CSC+DYW
Sbjct: 728 TAFKIISKLVGRQIIARDAKRFHHFENGVCSCKDYW 763
>gi|357447727|ref|XP_003594139.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483187|gb|AES64390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 305/405 (75%), Gaps = 18/405 (4%)
Query: 369 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
AS S NGTLE+LD ++GKVKEA+E L LEK I VDL QLM+ CG AK+LEE
Sbjct: 93 ASSGSLYNGTLEELDSFCRDGKVKEAVENLQKLEKLHIHVDLQRCLQLMRICGKAKSLEE 152
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
A+ VH H + L PL VST N +L+MY EC S+DDA VF +M E DLT+W TMI K
Sbjct: 153 ARVVHRHALQHLHPLTVSTDNRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVK 212
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
NG ED++DIF+QFK GLKPD Q+FIGVF ACS LGD+ EGMLHFESMSKDYGIVP+M
Sbjct: 213 NGFAEDSIDIFTQFKNMGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMA 272
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
HYVS+V+M+ S G+LDEALEFIEKMPMEP+V+VW+ LMN CR+HGN ELGD
Sbjct: 273 HYVSLVEMIASIGHLDEALEFIEKMPMEPNVEVWKTLMNSCRVHGNTELGDV-------- 324
Query: 609 DPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
K+KAGL+ S+L K+ E KL + +S+VHE+R GDTS P++DKIY
Sbjct: 325 -------KAKAGLLLGENSDLIKKNEQNKLTINP--KGQSRVHEFRNGDTSDPKSDKIYT 375
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+RGLR QMKE GYI ETR+ LHDID+EGKE+ LLAHSERLAV+ GL SSPAR+ IR++K
Sbjct: 376 LLRGLREQMKEDGYIAETRYALHDIDEEGKEDVLLAHSERLAVAKGLFSSPARSTIRVIK 435
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
N R+C DCH+ALKIISKIVGRELII+ AKR HHFK+GLCSC+DY+
Sbjct: 436 NFRICPDCHTALKIISKIVGRELIIQ-AKRCHHFKNGLCSCKDYF 479
>gi|51969704|dbj|BAD43544.1| putative protein [Arabidopsis thaliana]
Length = 537
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/509 (47%), Positives = 321/509 (63%), Gaps = 27/509 (5%)
Query: 281 NGNCMQDTGQHQQALSGHYSGN---FGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNE 337
NGN M ++ H ++G G G QNS Y+Q N Q + + R YQ N
Sbjct: 40 NGNPMDNSSHHIGYVNGFNGGEQSLGGFQQNS---YEQSLNPVSGQ-NPTNRFYQNGYNR 95
Query: 338 GQ-YQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNG------------TLEQLDG 384
Q Y +S I Q + C N G +L++LD
Sbjct: 96 NQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDS 155
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
+ +EGKVK+A+E++ + VDLP + Q CGDA+AL+EAK VHE + +
Sbjct: 156 ICREGKVKKAVEIIKSWRNEGYVVDLPRLFWMAQLCGDAQALQEAKVVHEFITSSVGISD 215
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+S YN I++MYS C S++DA +VF++M ER+L +W +I FAKNG GEDA+D FS+FKQ
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G KPD ++F +F AC LGD+ EG+LHFESM K+YGI+P M+HYVS+V ML GYLD
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLD 335
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EAL F+E MEP+VD+WE LMNL R+HG+L LGDRC ++VEQLD SRLN++SKAGLVPV
Sbjct: 336 EALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPV 393
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+S+L KEK + N + AGD S PE ++Y ++ L+ M E GY+P
Sbjct: 394 KSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVP 448
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
++ LHD+DQE K+E L H+ER A L +PAR+ IR+MKNLRVC DCH+ALK++S
Sbjct: 449 LSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMS 508
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIVGRELI RDAKRFHH KDG+CSCR+YW
Sbjct: 509 KIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|15236806|ref|NP_194971.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75209381|sp|Q9SUU7.1|PP346_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32450, mitochondrial; Flags: Precursor
gi|4049347|emb|CAA22572.1| putative protein [Arabidopsis thaliana]
gi|7270149|emb|CAB79962.1| putative protein [Arabidopsis thaliana]
gi|50897242|gb|AAT85760.1| At4g32450 [Arabidopsis thaliana]
gi|332660662|gb|AEE86062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/509 (47%), Positives = 321/509 (63%), Gaps = 27/509 (5%)
Query: 281 NGNCMQDTGQHQQALSGHYSGN---FGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNE 337
NGN M ++ H ++G G G QNS Y+Q N Q + + R YQ N
Sbjct: 40 NGNPMDNSSHHIGYVNGFNGGEQSLGGFQQNS---YEQSLNPVSGQ-NPTNRFYQNGYNR 95
Query: 338 GQ-YQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNG------------TLEQLDG 384
Q Y +S I Q + C N G +L++LD
Sbjct: 96 NQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDS 155
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
+ +EGKVK+A+E++ + VDLP + Q CGDA+AL+EAK VHE + +
Sbjct: 156 ICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISD 215
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+S YN I++MYS C S++DA +VF++M ER+L +W +I FAKNG GEDA+D FS+FKQ
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G KPD ++F +F AC LGD+ EG+LHFESM K+YGI+P M+HYVS+V ML GYLD
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLD 335
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EAL F+E MEP+VD+WE LMNL R+HG+L LGDRC ++VEQLD SRLN++SKAGLVPV
Sbjct: 336 EALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPV 393
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+S+L KEK + N + AGD S PE ++Y ++ L+ M E GY+P
Sbjct: 394 KSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVP 448
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
++ LHD+DQE K+E L H+ER A L +PAR+ IR+MKNLRVC DCH+ALK++S
Sbjct: 449 LSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMS 508
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIVGRELI RDAKRFHH KDG+CSCR+YW
Sbjct: 509 KIVGRELISRDAKRFHHMKDGVCSCREYW 537
>gi|51969930|dbj|BAD43657.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 615
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/395 (54%), Positives = 288/395 (72%), Gaps = 2/395 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+ D K GKVK+A+ + +L VDL +L + CG+A+ L+EAK VH +
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+S L +S+ + +L+MYS C ++A SVF M+E++L +W +I FAKNG GEDA+D+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+FK+ G PD Q+F G+F AC LGDV EG+LHFESMS+DYGI PS++ YVS+V+M
Sbjct: 343 FSRFKEEGDIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+LDEALEF+E+MPMEP+VDVWE LMNL R+HGNLELGD CAE+VE LDP+RLN++S+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
G +PV AS++ EKE+ K S L V+S + E+RAGDT+ PE D+++ L+R L+ M
Sbjct: 463 EGFIPVKASDV--EKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 520
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY+ ETR LHDIDQE KE LL HSER+A + +L+S R P ++KNLRVC DCH+
Sbjct: 521 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 580
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ALKI+S IVGRE+I RD KRFH K+G C+C+DYW
Sbjct: 581 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|79563130|ref|NP_180129.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546773|sp|Q680H3.2|PP170_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g25580
gi|330252626|gb|AEC07720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 615
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/395 (54%), Positives = 288/395 (72%), Gaps = 2/395 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+ D K GKVK+A+ + +L VDL +L + CG+A+ L+EAK VH +
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+S L +S+ + +L+MYS C ++A SVF M+E++L +W +I FAKNG GEDA+D+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+FK+ G PD Q+F G+F AC LGDV EG+LHFESMS+DYGI PS++ YVS+V+M
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+LDEALEF+E+MPMEP+VDVWE LMNL R+HGNLELGD CAE+VE LDP+RLN++S+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
G +PV AS++ EKE+ K S L V+S + E+RAGDT+ PE D+++ L+R L+ M
Sbjct: 463 EGFIPVKASDV--EKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 520
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY+ ETR LHDIDQE KE LL HSER+A + +L+S R P ++KNLRVC DCH+
Sbjct: 521 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 580
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ALKI+S IVGRE+I RD KRFH K+G C+C+DYW
Sbjct: 581 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>gi|4874299|gb|AAD31361.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 567
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/395 (54%), Positives = 288/395 (72%), Gaps = 2/395 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+E+ D K GKVK+A+ + +L VDL +L + CG+A+ L+EAK VH +
Sbjct: 175 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 234
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+S L +S+ + +L+MYS C ++A SVF M+E++L +W +I FAKNG GEDA+D+
Sbjct: 235 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 294
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+FK+ G PD Q+F G+F AC LGDV EG+LHFESMS+DYGI PS++ YVS+V+M
Sbjct: 295 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 354
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+LDEALEF+E+MPMEP+VDVWE LMNL R+HGNLELGD CAE+VE LDP+RLN++S+
Sbjct: 355 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 414
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
G +PV AS++ EKE+ K S L V+S + E+RAGDT+ PE D+++ L+R L+ M
Sbjct: 415 EGFIPVKASDV--EKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 472
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY+ ETR LHDIDQE KE LL HSER+A + +L+S R P ++KNLRVC DCH+
Sbjct: 473 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 532
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ALKI+S IVGRE+I RD KRFH K+G C+C+DYW
Sbjct: 533 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 567
>gi|297821961|ref|XP_002878863.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324702|gb|EFH55122.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/395 (53%), Positives = 291/395 (73%), Gaps = 2/395 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+++ D K+GKVK+A+ + LE V L +L + CG+A+ L+EAK VH +
Sbjct: 217 IKEFDEFCKQGKVKKALYTIDTLESMNHVVILSRLLRLAKLCGEAEGLQEAKVVHGKISS 276
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+S L VS+ + +L+MYS C ++A +VF M+E++L +W +I FAKNG GEDA+D+
Sbjct: 277 SVSHLDVSSNHVLLEMYSNCGLANEAANVFEKMSEKNLETWYIIIRCFAKNGFGEDAIDM 336
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F++FK+ G +PD Q+F G+F AC LGDV EG+LHFESMS+DYGIVPS++ YVS+V+M
Sbjct: 337 FARFKKEGNRPDAQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIVPSIEDYVSLVEMYS 396
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+LDEALEF+E+MPMEP+VDVWE LMNL R+HGNLELGDRCAE+VE LDP+RLN++S+
Sbjct: 397 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDRCAEVVELLDPTRLNKQSR 456
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
G +PV AS++ KE K+ S L V+S + ++AGDT+ PE D+++ L+R L+ M
Sbjct: 457 EGFLPVKASDIEKEILKKR--SGILHGVKSTMLNFKAGDTNLPENDELFQLLRNLKMHMV 514
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY+ +T+ LHDIDQE KE ALL HSER+A + +L++P R P +MKNLRVC DCH+
Sbjct: 515 EMGYVADTKPALHDIDQESKETALLGHSERIAFARAVLNTPPRKPFTVMKNLRVCVDCHN 574
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A KI++ IVGRE+I+RD KRFHH K+G CSC DYW
Sbjct: 575 AWKIMAVIVGREVIMRDIKRFHHMKNGACSCNDYW 609
>gi|297802776|ref|XP_002869272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315108|gb|EFH45531.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 468
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/449 (49%), Positives = 304/449 (67%), Gaps = 21/449 (4%)
Query: 333 QNPNEGQYQSYSGNIQNGMMASQVLNNCKHED---DFAEASRSSQNNGTLEQLDGLVKEG 389
QNPN YQ+ S Q+ + Q N + D + + + +L++LD + +EG
Sbjct: 33 QNPNRF-YQNCSNQNQSYEICYQRHQNWQTSDACSSYGTGQQDHSGHSSLDELDAICREG 91
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
KVKEA++++ + VDL + Q CGDA+AL+EAK VHE + + +S YN
Sbjct: 92 KVKEAVDIIKSWRNEGYVVDLLRLLWIAQLCGDAQALQEAKVVHEFITSSVGTSDISAYN 151
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
I++MYS C S +DA +VF++M ER+L +W +I FAKNG GEDA+DIFS+FK+ G +P
Sbjct: 152 SIIQMYSGCGSAEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDIFSRFKEEGNRP 211
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D +IF +F AC LGD+ EG+LHFESM K+YGI PS++HYVS+V ML GYLDEAL F
Sbjct: 212 DGEIFKDIFFACGVLGDMNEGLLHFESMVKEYGIFPSVEHYVSLVKMLAEPGYLDEALRF 271
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL 629
+E MEP+VD+WE LMNL R+HG+ LGDRC ++VEQLD SRLN++S+AGLVPV +S+L
Sbjct: 272 VES--MEPNVDLWETLMNLSRVHGDFILGDRCQDMVEQLDASRLNKESRAGLVPVKSSDL 329
Query: 630 AKEKENK-----KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
KEK + K S+++ AGD S PE + Y ++ L+ M E GY+P
Sbjct: 330 VKEKLQRMAKGPKYGSRHM----------AAGDISRPENREFYMALKSLKEHMIEIGYVP 379
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
E++ LHD+D+E K+E L H+ER A L +PAR+ I+++KN+RVC DCH+ALK++S
Sbjct: 380 ESKLALHDVDKESKDENLFNHNERFAFIRTFLDTPARSTIQVVKNIRVCVDCHNALKLMS 439
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIVGRELI RDAKR+HH KDG+CSCRDYW
Sbjct: 440 KIVGRELISRDAKRYHHMKDGVCSCRDYW 468
>gi|147834943|emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
Length = 627
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/600 (40%), Positives = 338/600 (56%), Gaps = 70/600 (11%)
Query: 180 RGFQQNSNEFYQHHAGVNSESHINEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMS 239
R FQ N Y ++ S+S+ N +QN ++ + G+ N GQ +P
Sbjct: 92 RDFQHQRNPNYNWNSQTQSQSYPQHM--NYGEQNQSYPNRGYPNQGQGYP---------- 139
Query: 240 RSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHY 299
G+ N N+ P + P +R +Q + + GN G QQ +
Sbjct: 140 -QHGSPNQWNRQTPTYPQPQN--PSRPNHQNQYYPPT-----GNPSLGQGYPQQRSPNQW 191
Query: 300 SGNFGIHQNSPSFYQQDQNGGQYQWDQSRR----QYQQNPNEGQYQSYSGNIQNGMMASQ 355
+ HQN Q++N Y SR Q Q P++G + N QN A
Sbjct: 192 NPQ---HQNPSPLNNQNEN---YPQPGSRNLPSNQNQSYPHQGSPSQW--NNQNTNQAQI 243
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ 415
V N H ++ L L +EGKVKEA+E L+EK + D F
Sbjct: 244 VENQVSHAPP------------SVADLMNLCQEGKVKEAVE---LMEK-GVRADAQCFYA 287
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L +CG K LEEAK VH+ L S R + N +L+MY C SM DA VF +MT
Sbjct: 288 LFNSCGSPKLLEEAKKVHDFF--LQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTN 345
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
RD+ SW MI G+A N +G+D + ++ Q ++ GL+P++Q F+ V S C++ V EG +H
Sbjct: 346 RDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIH 405
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
FESM +YGI P+ +HYV I+D+LG +G++ EA EFIE+MP+EP VWE LMN ++HG
Sbjct: 406 FESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHG 465
Query: 594 NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEY 653
+++L D E++ LDP K+ A P KK + N+L+ ++++ E+
Sbjct: 466 DIDLEDHAEELMVALDPL----KAVANKTPTPPP--------KKRTAINMLDGKNRLSEF 513
Query: 654 RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSH 713
R T + + +K+ +L MKEAGY+P+TR+VLHDIDQE KE+ALL HSERLA+++
Sbjct: 514 R-NPTLYKDDEKLKSL-----NGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 567
Query: 714 GLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GL+S+PAR P+RI+KNLRVCGDCH+A+KI+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 568 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 627
>gi|297845892|ref|XP_002890827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336669|gb|EFH67086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 471
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/470 (42%), Positives = 290/470 (61%), Gaps = 35/470 (7%)
Query: 306 HQ-NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHED 364
HQ +S ++Y + + + + + R + QNP GQY++
Sbjct: 35 HQHDSLTYYGRTEIINRLERYITERTWTQNPIVGQYKT---------------------- 72
Query: 365 DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK 424
S S N T+E D L +G +EA+EVL LE + ++DL +L + CG+ +
Sbjct: 73 ---TVSPSVAQNVTIETFDSLCNQGNWREAVEVLDYLENKGFAMDLIRLLRLAKICGEPE 129
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
ALE A+ VHE + L+SP V + N I+KMYS C S+D A VF M +R+ +W M+T
Sbjct: 130 ALEAARVVHECIIALVSPCDVGSRNAIIKMYSCCGSVDHALKVFDEMPKRNSETWCVMMT 189
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
F NG GE+A+++F++FK+ G KPD +IF V S C+ GD+ EG L FE+M+++YGI+
Sbjct: 190 CFVNNGFGEEAINLFTRFKEEGNKPDGEIFNQVLSTCTLTGDLKEGSLQFEAMNREYGII 249
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
PSM+HY S+ M ++G+LDEAL F+E+MPMEP VDVWE LMNL R+HG++ELGDRCAE+
Sbjct: 250 PSMEHYHSVTKMFATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 309
Query: 605 VEQLDPSRLNEKSKAGLVPVNASE-LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPET 663
VE+LD +RL++ S AGLV AS+ + KE N+ + +R DTSHP+
Sbjct: 310 VEKLDATRLDKVSSAGLVVTKASDNVKKEPSNRSEPYW--------CYNFRPVDTSHPQM 361
Query: 664 DKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAP 723
+ IY + LR+QMKE GY+P+TRF I G +E + + E +AV LL S R+
Sbjct: 362 NIIYETLMSLRSQMKEMGYVPDTRFYRTLIMVMGNKEQVFGYREEIAVVESLLKSKPRSS 421
Query: 724 IRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I ++ N+R+ GDCH+ +K++S I GR+L RDA+R+H FK+G+C C D W
Sbjct: 422 ITLITNVRIVGDCHNMMKLMSVITGRDLFKRDAQRYHLFKNGVCRCNDRW 471
>gi|225428796|ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/600 (40%), Positives = 335/600 (55%), Gaps = 70/600 (11%)
Query: 180 RGFQQNSNEFYQHHAGVNSESHINEFQNNTFQQNGNFNDYGWYNNGQPHPNLSGAQPQMS 239
R FQ N Y ++ S+S+ N QN ++ + G+ N GQ +P
Sbjct: 58 RDFQDQRNPSYNWNSQTQSQSYPQHM--NYGDQNQSYPNRGYPNQGQGYPQHE------- 108
Query: 240 RSGGNANVQNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHY 299
N N N+ P + P +R +Q + + GN G QQ +
Sbjct: 109 ----NPNQWNRQTPTYPQPQN--PSRPNHQNQYYPPT-----GNPSLGQGYPQQRSPNQW 157
Query: 300 SGNFGIHQNSPSFYQQDQNGGQYQWDQSRR----QYQQNPNEGQYQSYSGNIQNGMMASQ 355
+ HQN Q+QN Y SR Q Q P++G + N QN A
Sbjct: 158 NPQ---HQNPSHLNNQNQN---YPQPGSRNLPSNQNQSYPHQGSPSQW--NNQNPNQAQI 209
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ 415
V N H ++ L L +EGKVKEA+E L+EK + D F
Sbjct: 210 VENQVSHAPP------------SVADLMNLCQEGKVKEAVE---LMEK-GVRADAQCFYA 253
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L +CG K LEEAK VH+ L S R + N +L+MY C SM DA VF +M
Sbjct: 254 LFNSCGSPKLLEEAKKVHDFF--LQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMAN 311
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
RD+ SW MI G+A N +G+D + ++ Q ++ GL+P++Q F+ V S C++ V EG +H
Sbjct: 312 RDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIH 371
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
FESM +YGI P+ +HYV I+D+LG +G++ EA EFIE+MP+EP VWE LMN ++HG
Sbjct: 372 FESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHG 431
Query: 594 NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEY 653
+++L D E++ LDP K+ A P KK + N+L+ ++++ E+
Sbjct: 432 DIDLEDHAEELMVALDPL----KAVANKTPTPPP--------KKRTAINMLDGKNRLSEF 479
Query: 654 RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSH 713
R T + + +K+ +L MKEAGY+P+TR+VLHDIDQE KE+ALL HSERLA+++
Sbjct: 480 R-NPTLYKDDEKLKSL-----NGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAY 533
Query: 714 GLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GL+S+PAR P+RI+KNLRVCGDCH+A+KI+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 534 GLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593
>gi|225444971|ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Vitis vinifera]
Length = 476
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/392 (47%), Positives = 266/392 (67%), Gaps = 22/392 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L GL +EGK++EA+E +G Q + + F ++ +CG K+LE + VH+ + R
Sbjct: 107 LMGLCEEGKIREAVEYMG----QGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKF 162
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +++MY C SM DA VF M ER+++SW MI G+A NG G D + +F +
Sbjct: 163 GGDVELNNKLIEMYGRCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFER 222
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GL+P + F+ V SAC G V EG+++FE M K+ GI+P ++HY+ ++D+LG G
Sbjct: 223 MRKVGLRPVGETFVAVLSAC---GSVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFG 279
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+++EA EF++KMP+EP +VWE L N R+HG +EL DR E++ LDPS K+
Sbjct: 280 HINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPS----KAITDK 335
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
+P KK + N+LE +++V EYR +++P Y ++GL QM+EAG
Sbjct: 336 IPT--------PPQKKQLAVNMLEGKNRVSEYR---STNPYKGDAYEKLKGLNGQMREAG 384
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+A+K
Sbjct: 385 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK 444
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 445 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 476
>gi|297823223|ref|XP_002879494.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325333|gb|EFH55753.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/397 (47%), Positives = 272/397 (68%), Gaps = 5/397 (1%)
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
T+E+ D L +E K++EA+EV+ +LE VD P L + CG+ +ALEEA+ VH+
Sbjct: 81 TIEKFDALCEEVKIREALEVVDILEDNGYVVDFPRILGLAKLCGEVEALEEARVVHD--- 137
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
++PL +Y+ +++MYS C S DA VF M ER+ +W M+ AKNG GE AVD
Sbjct: 138 -CITPLDARSYHTVIEMYSGCGSTYDALKVFDEMPERNSETWCIMMRCLAKNGEGERAVD 196
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F+ FK+ G KPD +IF VF AC +LGD+ EG+LHFESM ++YGI+P M+ YV + +ML
Sbjct: 197 MFTSFKEEGNKPDKEIFKAVFFACVSLGDINEGLLHFESMYRNYGIIPCMEDYVIVTEML 256
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
+ G+LDEALEF+E+M +EP V++WE LMNLC +HG+LELGDR AE+V++LD SR+N++S
Sbjct: 257 AACGHLDEALEFVERMTVEPSVEMWETLMNLCWVHGDLELGDRFAELVKKLDASRMNKES 316
Query: 618 KAGLVPVNASELAKEKENKKLASQNLL-EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
AGLV S+ KEK + Q + + + ++ ++RAGDTSH + D+ A +R L+ Q
Sbjct: 317 NAGLVAAKESDSTKEKLKELRYCQMMRDDPKLRICQFRAGDTSHRKNDETVAALRSLKVQ 376
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
M + G+ P TR L +++E KEE LL S +LA ++ LL S AR P + +++R C D
Sbjct: 377 MLDMGFFPATRVCLEKVEKEEKEEQLLFRSNKLAFAYALLHSKARKPFTVTQDMRTCIDG 436
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+ K+IS I GREL RD KRFHH+++G+CSCRDYW
Sbjct: 437 HNTFKMISLITGRELTQRDQKRFHHYRNGVCSCRDYW 473
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/466 (41%), Positives = 292/466 (62%), Gaps = 29/466 (6%)
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFA 367
N P+F Q Q G QW+ Q Q++P G+ + + +N ++Q+ N + D
Sbjct: 252 NPPNFNYQQQRGPN-QWN---NQNQEHPQFGRPEHRNPQAEN---SNQLNNQAGIQRDGT 304
Query: 368 EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE 427
+ + +++L EGK+KEA+E+L KQ + D+ F L + CG +K+ +
Sbjct: 305 QNQAPNALVSPIDELRRFCGEGKLKEAVELL----KQGVKADVDCFHLLFELCGKSKSFD 360
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
AK VH++ + + N +L+MY C SM DA VF +M +R + SW M+ G+A
Sbjct: 361 NAKVVHDYFLQSSCRSDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYA 420
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
NGLG++ +++F K GL+P+ Q F+ V SAC++ V EG L+FESM DY I P
Sbjct: 421 DNGLGDEGLELFENMKNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDT 480
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
HY+ ++ +LG G++ EA E++EK+PMEP V+VWE L N R+HG+++L D E++
Sbjct: 481 NHYLGLLGILGEPGHIHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVD 540
Query: 608 LDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
LDP++ + P KK ++ ++L+ ++++ E+R T + + +K+
Sbjct: 541 LDPTKAVSNKISTPPP------------KKRSAISMLDGKNRIVEFR-NPTLYKDDEKLK 587
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
AL MKE GY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+
Sbjct: 588 AL-----KAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 642
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 643 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 688
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/549 (39%), Positives = 312/549 (56%), Gaps = 55/549 (10%)
Query: 248 QNQYGPIHYGPGEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQ 307
Q Q+G P +V FN Q FSE F G H L+ Y Q
Sbjct: 72 QPQWG----SPSQVNPPSENFNHQSFSE----FQNRDYAQQGSHGNQLN--YRSQHQSPQ 121
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQ----NPNEGQYQSYSGNIQ--NGMMASQVLNNCK 361
+P F +Q Q+ Q +QS QYQ NP YQ G Q N +
Sbjct: 122 PNPGFSRQGQSYSQPLPNQSYPQYQNPSQPNPPNFNYQQQRGPNQWNNQNQEHPQFGRPE 181
Query: 362 HEDDFAEASRS------SQNNGT-----------LEQLDGLVKEGKVKEAIEVLGLLEKQ 404
H + AE S Q +GT +++L EGK+KEA+E+L KQ
Sbjct: 182 HRNPQAENSNQLNNQAGIQRDGTQNQAPNALVSPIDELRRFCGEGKLKEAVELL----KQ 237
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
+ D+ F L + CG +K+ + AK VH++ + + N +L+MY C SM DA
Sbjct: 238 GVKADVDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYGRCGSMSDA 297
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
VF +M +R + SW M+ G+A NGLG++ +++F K GL+P+ Q F+ V SAC++
Sbjct: 298 RRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSACASA 357
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
V EG L+FESM DY I P HY+ ++ +LG G++ EA E++EK+PMEP V+VWE
Sbjct: 358 NAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHEAFEYVEKLPMEPTVEVWET 417
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL 644
L N R+HG+++L D E++ LDP++ + P N S ++ +L
Sbjct: 418 LKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKNXSAIS------------ML 465
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
+ ++++ E+R +P K ++ L+A MKE GY+P+TR+VLHDIDQE KE+ALL
Sbjct: 466 DGKNRIVEFR-----NPTLYKDDXKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLY 519
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+A+KI+S+IVGRELI+RD KRFHHFKD
Sbjct: 520 HSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKD 579
Query: 765 GLCSCRDYW 773
G CSC DYW
Sbjct: 580 GKCSCGDYW 588
>gi|147835805|emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
Length = 497
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/391 (47%), Positives = 265/391 (67%), Gaps = 22/391 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L GL +EGK++EA+E +G Q + + F ++ +CG K+LE + VH+ + R
Sbjct: 109 LMGLCEEGKIREAVEYMG----QGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKF 164
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +++MY C SM DA VF M ER+++SW MI G+A NG G D + +F +
Sbjct: 165 GGDVELNNKLIEMYGRCGSMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFER 224
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GL+P + F+ V SAC G V EG+++FE M K+ GI+P ++HY+ ++D+LG G
Sbjct: 225 MRKVGLRPVGETFVAVLSAC---GSVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFG 281
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+++EA EF++KMP+EP +VWE L N R+HG +EL DR E++ LDPS K+
Sbjct: 282 HINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPS----KAITDK 337
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
+P KK + N+LE +++V EYR +++P Y ++GL QM+EAG
Sbjct: 338 IPT--------PPQKKQLAVNMLEGKNRVSEYR---STNPYKGDAYEKLKGLNGQMREAG 386
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+A+K
Sbjct: 387 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK 446
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
I+SKIVGRELI+RD KRFHHFKDG CSC DY
Sbjct: 447 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDY 477
>gi|15226292|ref|NP_180984.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75330956|sp|Q8S8Q7.1|PP183_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g34370, mitochondrial; Flags: Precursor
gi|20197161|gb|AAM14949.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|67633584|gb|AAY78716.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253871|gb|AEC08965.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 469
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/415 (45%), Positives = 285/415 (68%), Gaps = 9/415 (2%)
Query: 360 CKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA 419
C+ +A+ + Q+ T+E D L K+ K++EA+EV+ +LE + VD P L +
Sbjct: 63 CRRVSSYAQMVNNHQS-VTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKL 121
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
CG+ +ALEEA+ VH+ + +PL +Y+ +++MYS C S DDA +VF+ M +R+ +W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
TMI AKNG GE A+D+F++F + G KPD +IF VF AC ++GD+ EG+LHFESM +
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
DYG+V SM+ YV++++ML + G+LDEAL+F+E+M +EP V++WE LMNLC + G LELGD
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 600 RCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL-EVRSKVHEYRAGDT 658
R AE++++LD SR++++S AGLV AS+ A EK + Q + + + ++HE+RAGDT
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDT 357
Query: 659 SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS 718
SH T + R L+ QM + G++P TR +++E KEE LL S +LA +H +++S
Sbjct: 358 SHLGTVSAF---RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINS 414
Query: 719 PARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
AR P+ +++N+R C D H+ K+IS I GR LI RD K++H +K+G+CSC+DYW
Sbjct: 415 EARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>gi|356500039|ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 591
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 263/398 (66%), Gaps = 26/398 (6%)
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
++ L L KEGKVKEAIE++ + + D F L CG +K+LE+AK H+H
Sbjct: 218 SITDLTRLCKEGKVKEAIELMD----KGVKADAGCFDLLFDLCGQSKSLEDAKKAHDHF- 272
Query: 438 RLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
L S R ++ N +++MY C SM DA VF +M RD+ SW M+ G+A N G+DA
Sbjct: 273 -LQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMGSWHLMLRGYAYNTNGDDA 331
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +F Q + GL+ + + V SAC++ DV + LHFESM YGI P ++HY+ ++D
Sbjct: 332 LQLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYGIEPGVEHYMGLLD 391
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+LG + YL EA EFI+++P EP V VWEKL + R+HG+++L D E++ LDPS
Sbjct: 392 VLGQSAYLKEAEEFIDQLPFEPTVAVWEKLKHYARVHGDVDLEDYTEELIVSLDPS---- 447
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
K+ A +P KK + N+L+ R+++ EY+ T + + +K+ AL +
Sbjct: 448 KAVANKIPTPPP--------KKYTAINMLDGRNRIIEYK-NPTLYKDDEKLKAL-----S 493
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
MKE GY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+P R P+RI+KNLRVCGD
Sbjct: 494 GMKETGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGD 553
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 554 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 591
>gi|15220520|ref|NP_174264.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169106|sp|Q9C6G2.1|PPR63_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g29710, mitochondrial; Flags: Precursor
gi|12321411|gb|AAG50776.1|AC079288_5 hypothetical protein [Arabidopsis thaliana]
gi|332192999|gb|AEE31120.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 475
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/408 (45%), Positives = 264/408 (64%), Gaps = 13/408 (3%)
Query: 369 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
S S N T+E D L +G +EA+EVL LE + ++DL L + CG +ALE
Sbjct: 78 VSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEA 137
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
A+ VHE + L+SP V N I++MYS C S+DDA VF M E + + M+ F
Sbjct: 138 ARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVN 197
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
NG GE+A+D+F++FK+ G KP+ +IF VFS C+ GDV EG L F++M ++YGIVPSM+
Sbjct: 198 NGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSME 257
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
HY S+ ML ++G+LDEAL F+E+MPMEP VDVWE LMNL R+HG++ELGDRCAE+VE+L
Sbjct: 258 HYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL 317
Query: 609 DPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEY---RAGDTSHPETDK 665
D +RL++ S AGLV AS+ K++ + RS+ + Y R D+SHP+ +
Sbjct: 318 DATRLDKVSSAGLVATKASDFVKKEPS----------TRSEPYFYSTFRPVDSSHPQMNI 367
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY + LR+Q+KE GY+P+TR+ I +E + + E +AV LL S R+ I
Sbjct: 368 IYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAIT 427
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++ N+R+ GDCH +K++S I GR++I RDAK +H FK+G+C C + W
Sbjct: 428 LLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>gi|356521500|ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 588
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/397 (46%), Positives = 263/397 (66%), Gaps = 26/397 (6%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ L L +EGKVKEAIE++ + + D F+ L +CG +K+LE+AK H+H
Sbjct: 216 ITDLTRLCREGKVKEAIELMD----KGVKADAGCFALLFDSCGQSKSLEDAKKAHDHF-- 269
Query: 439 LLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
L S R ++ N +++MY C SM DA VF +M RD+ SW M+ G+A N G++A+
Sbjct: 270 LQSTFRSDLTLNNKVIEMYGNCKSMTDARRVFDHMPNRDMDSWHLMMRGYANNTNGDEAL 329
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F Q + GL+ + + V SAC++ DV + LHFESM YGI P + HY+ ++D+
Sbjct: 330 QLFEQMNELGLEITSETLLAVLSACASAEDVEDAFLHFESMKSKYGIEPVVGHYMGLLDV 389
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG + YL EA EFI+++P EP V VWEKL + R HG+ +L D E++ LDPS K
Sbjct: 390 LGQSAYLKEAEEFIDQLPFEPTVAVWEKLKHYARAHGDFDLEDYTEELIVSLDPS----K 445
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ A +P+ KK + N+L+ R+++ EY+ T + + +K+ AL +
Sbjct: 446 AVANKIPMPPP--------KKYTAINMLDGRNRIIEYK-NPTLYKDDEKLKAL-----SG 491
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MKEAGY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+P R P+RI+KNLRVCGDC
Sbjct: 492 MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDC 551
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 552 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588
>gi|449446817|ref|XP_004141167.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 256/392 (65%), Gaps = 18/392 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L +EGKV + +E +G Q VD F+ L+ +C + K LE + V ++
Sbjct: 85 LLALCEEGKVIDVLEYIG----QGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKF 140
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +++MYS C M DA VF M +D +SW+ MI G+ NG G++ + +F Q
Sbjct: 141 RGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNLMIKGYGDNGEGDNGLALFEQ 200
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K AGL+P+ + F+ V +AC+ V EG+ +F+ M+ +YGI P ++HY+ +VD+LG +G
Sbjct: 201 MKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSG 260
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+L EA EFIEKMP+ P +W+ L N R+HGN+EL DR E++ LDPS + K L
Sbjct: 261 HLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSL 320
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
P +K +S N+LE + +V E+R + P ++ ++GL QM+EAG
Sbjct: 321 PP-----------RRKQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKGLNGQMREAG 366
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDID+E K++AL HSERLA+++GL+S+PAR +RI+KNLR+CGDCH+A+K
Sbjct: 367 YVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIK 426
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 427 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
>gi|449488164|ref|XP_004157956.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 255/392 (65%), Gaps = 18/392 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L +EGKV +A+E +G Q VD F+ L+ +C + K LE + V ++
Sbjct: 85 LLALCEEGKVIDALEYIG----QGAKVDYGVFTALLNSCCNLKLLEAGRRVDGLLKGTKF 140
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +++MYS C M DA VF M +D +SW+ MI G NG G++ + +F Q
Sbjct: 141 RGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNLMIKGCGDNGEGDNGLALFEQ 200
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K GL+P+ + F+ V +AC+ V EG+ +F+ M+ +YGI P ++HY+ +VD+LG +G
Sbjct: 201 MKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVVDVLGKSG 260
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+L EA EFIEKMP+ P +W+ L N R+HGN+EL DR E++ LDPS + K L
Sbjct: 261 HLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSL 320
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
P +K +S N+LE + +V E+R + P ++ ++GL QM+EAG
Sbjct: 321 PP-----------RRKQSSTNMLEEKDRVREFRC---AMPYKEEGEGRLKGLNGQMREAG 366
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDID+E K++AL HSERLA+++GL+S+PAR +RI+KNLR+CGDCH+A+K
Sbjct: 367 YVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIK 426
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 427 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458
>gi|242056975|ref|XP_002457633.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
gi|241929608|gb|EES02753.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
Length = 396
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/395 (45%), Positives = 264/395 (66%), Gaps = 34/395 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VK+A+E+L + D P F +L AC + K +EE + VH+ R
Sbjct: 34 ELIGLCREGRVKDAVELLA----KGARADPPAFYELAAACSNPKLIEELRKVHDFFLR-- 87
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +L+MY++C +M A F NM +RD+ SW M+ G++ NGLG++A+ +
Sbjct: 88 SPFRGDLRVNNKLLEMYTKCGAMPHARRTFDNMPDRDMDSWHIMMDGYSMNGLGDEALRM 147
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F K+ L P ++ V +AC+ + E L+F++MS+D+GI P ++HYV I+++LG
Sbjct: 148 FELMKEC-LAPTSHTYVLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLG 206
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EALE+IEK+P EP+ VWE ++NL RM+G+++L DR E++ LDPS+ N K
Sbjct: 207 KSGHLNEALEYIEKLPFEPNAMVWESVLNLARMNGDIDLEDRAEELLVSLDPSKANPKKL 266
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+ L P K+ N+L+ R+++ EYR P+ + R +
Sbjct: 267 STLPP------------KRRMGINMLDGRNRLVEYRLP----PKIE---------RKVVN 301
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+
Sbjct: 302 EQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 361
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 362 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 396
>gi|356497955|ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 452
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/392 (47%), Positives = 259/392 (66%), Gaps = 20/392 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L +EG + + +E++G Q D + L+ C ++LE K VHE + R
Sbjct: 81 LVSLCEEGNLDQVLELMG----QGAVADYRVYLALLNLCEHTRSLESGKRVHEFLRRSTF 136
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY +C S+ DA VF + ER+++SW MI G+A NGLG D + +F Q
Sbjct: 137 RRDVELSNRLIGMYCKCGSVKDARRVFDQIPERNISSWHLMIGGYAANGLGCDGLLVFQQ 196
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
KQAG+ PD + F V +AC+ V EG LHFESM K++GIVPSM+HY+ ++++LG+TG
Sbjct: 197 MKQAGVPPDGETFELVLAACAQAEAVEEGFLHFESM-KEHGIVPSMEHYLEVINILGNTG 255
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA EFIEK+P+E V+ WE L N + HG+L+L D E++ LDPS K+ A
Sbjct: 256 QLNEAEEFIEKIPIELGVEAWESLRNFAQKHGDLDLEDHAEEVLTCLDPS----KAVADK 311
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
+P KK + N+LE +++V EYR S P ++ + + GL QM+EAG
Sbjct: 312 LP--------PPPRKKQSDMNMLEEKNRVTEYR---YSIPYKEEAHEKLGGLSGQMREAG 360
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+K
Sbjct: 361 YVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIK 420
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 421 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 452
>gi|259490048|ref|NP_001159270.1| uncharacterized protein LOC100304360 [Zea mays]
gi|223943115|gb|ACN25641.1| unknown [Zea mays]
gi|413948667|gb|AFW81316.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 580
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/395 (46%), Positives = 264/395 (66%), Gaps = 34/395 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VK+A+E+L + DL TF +L C + K LEE + VH+ R
Sbjct: 218 ELMGLCREGRVKDAVELLS----KGARTDLDTFYELAATCSNPKLLEELRKVHDFFLR-- 271
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +L MY++C +M A F NM +RD+ SW MI G++ NGLG++A+ +
Sbjct: 272 SPFRGDLRVNNMLLAMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRL 331
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F K+ + P Q ++ V +AC+ + E +L+F++MS+D+GI P ++HYV I+++LG
Sbjct: 332 FELMKEC-MAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLG 390
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EALEFIEK+P EP+ VWE L+NL RM+G+++L DR E++ LDPS+
Sbjct: 391 KSGHLNEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSK------ 444
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
N +L ++L N+L+ R+K+ EYR P+ +K +
Sbjct: 445 -----ANPKKLPTPPPKRRLGI-NMLDGRNKLVEYRLP----PKIEK---------KVVN 485
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+
Sbjct: 486 EQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 545
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 546 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 580
>gi|293334013|ref|NP_001167864.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
gi|223944527|gb|ACN26347.1| unknown [Zea mays]
gi|413946729|gb|AFW79378.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 578
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 182/395 (46%), Positives = 263/395 (66%), Gaps = 34/395 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VK+A+E LL+K + D F +L AC + K LEE + VH+ R
Sbjct: 216 ELMGLCREGRVKDAVE---LLDKGACA-DPAAFYELAAACSNPKLLEELRKVHDFFLR-- 269
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +LKMY++C +M A F NM +RD+ SW +I G++ NGLG++A+ +
Sbjct: 270 SPFRGDLRVNNKLLKMYAKCAAMPHARRTFDNMPDRDMDSWHIVIDGYSVNGLGDEALRL 329
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F K+ + P ++ V +AC+ + E +L+F++M +D+GI P ++HYV I+++LG
Sbjct: 330 FELMKEC-MSPTSHTYLLVLNACANSEAIEEALLYFDAMHRDHGIEPGVEHYVGIIEVLG 388
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EALEFIEK+P EP+ VWE L+NL RM+G+++L DR E++ LDPS+ N K
Sbjct: 389 KSGHLNEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKSNHKKL 448
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
P K+ N+L+ R+K+ EYR P+ +K +
Sbjct: 449 PTPPP------------KRRLGINMLDGRNKLVEYRLP----PKIEK---------KVVN 483
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+
Sbjct: 484 EQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 543
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 544 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 578
>gi|242089073|ref|XP_002440369.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
gi|241945654|gb|EES18799.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
Length = 642
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 181/395 (45%), Positives = 265/395 (67%), Gaps = 34/395 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VK+A+E+L + D P F +L AC + K LEE + VH+ R
Sbjct: 280 ELMGLCREGRVKDAVELLA----KGAHADPPAFYELAAACSNPKLLEELRKVHDFFLR-- 333
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +L+MY++C +M A F NM +RD+ SW MI G++ NGLG++A+ +
Sbjct: 334 SPFRSDLRVNNKLLEMYAKCAAMPHARRTFDNMPDRDMDSWHIMIDGYSVNGLGDEALRL 393
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F K+ + P Q ++ V +AC+ + E +L+F++MS+D+GI P ++HYV I+++LG
Sbjct: 394 FELMKEC-MAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGIIEVLG 452
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EALEFIEK+P EP+ VWE L+NL +M+G+++L DR E++ LDPS+
Sbjct: 453 KSGHLNEALEFIEKLPFEPNAMVWESLLNLAQMNGDIDLEDRAEELLVSLDPSK------ 506
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
N +L ++L N+L+ R+K+ EYR P+ +K +
Sbjct: 507 -----ANPKKLPTPPPKRRLGI-NMLDGRNKLVEYRLP----PKIEK---------KVVN 547
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+
Sbjct: 548 EQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 607
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 608 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 642
>gi|357501199|ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 446
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/389 (47%), Positives = 255/389 (65%), Gaps = 20/389 (5%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
++EG V + +E++G Q D F L++ C D K+LE K VHE + R
Sbjct: 78 FLQEGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ +Y +C S+ DA VF M +R++ S + MI G+ NGLG D + +F Q +Q
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQ 193
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PD++ F V + C+ + V EG++ FESM K+YGIVP M+HY+ +V++ G G LD
Sbjct: 194 QGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGCAGRLD 252
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA EFIE MP+E V++WE L N R+HG+LE D E++ LDPS K+ A VP+
Sbjct: 253 EAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPS----KAAADKVPL 308
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+ KK ++ N+LE +++V EYR E D +RGL QM+EAGY+P
Sbjct: 309 --------PQRKKQSAINMLEEKNRVSEYRCNMPYKEEGD---VKLRGLTGQMREAGYVP 357
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+KI+S
Sbjct: 358 DTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMS 417
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 418 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 446
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/395 (45%), Positives = 260/395 (65%), Gaps = 33/395 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L L +EG+ KEA+E LLEK D +F +L AC K LEE + VH+++ R
Sbjct: 175 KLIALCREGRAKEAVE---LLEKGA-RADAASFYELAGACSTPKLLEELRKVHDYLLR-- 228
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N L+MY C +M A F +M +RD+ SW MI G+A NGLG+ + +
Sbjct: 229 SPFRADLQVNNRFLEMYGRCGNMTHARRTFDHMPDRDMASWHLMIEGYAANGLGDAGLQL 288
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + K+ G+ P + F+ V AC+ + E L+F++MS+D+GI P M+HYV I+++LG
Sbjct: 289 FEEMKRCGMAPTARTFVLVLDACANSEAIEEAFLYFDAMSRDHGIEPGMEHYVGIIEVLG 348
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EA+E++EK+P EP+ +WE ++NL RM+G+++L DR E++ LDPS+
Sbjct: 349 KSGHLNEAVEYVEKLPFEPNAMIWESVLNLARMNGDIDLEDRVEELLVSLDPSK------ 402
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
N +L ++L N+L+ R+K+ EYR P+ +K +
Sbjct: 403 -----ANPKKLPTPPPKRRLGI-NMLDGRNKLGEYRLP----PKIEK---------KVVN 443
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+
Sbjct: 444 EQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 503
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A+KI+S+IVGRELI+RD KRFHHFK+G CSC DYW
Sbjct: 504 AIKIMSRIVGRELIVRDNKRFHHFKEGKCSCGDYW 538
>gi|357475405|ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509043|gb|AES90185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 565
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 260/398 (65%), Gaps = 26/398 (6%)
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
++ L +EGKVKEA+E L+EK I D F L CG +K++E+AK VH++
Sbjct: 192 SIVDLTRFCQEGKVKEALE---LMEKG-IKADANCFEILFDLCGKSKSVEDAKKVHDYF- 246
Query: 438 RLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
L S R +N +++MY C SM DA VF +M R++ SW MI G+A + +G++
Sbjct: 247 -LQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEG 305
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +F Q + GL+ + + V SAC + V + ++ ESM YGI P ++HY+ ++D
Sbjct: 306 LQLFEQMNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLD 365
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+LG +GYL EA EFIE++P EP V V+E L N R+HG+++L D E++ LDPS
Sbjct: 366 VLGQSGYLKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPS---- 421
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
K+ A +P KK + ++L+ ++++ EY+ T + + +K+ A+
Sbjct: 422 KAVANKIPTPPP--------KKYTAISMLDGKNRIIEYK-NPTLYKDDEKLIAM-----N 467
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
MK+AGY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+P R P+RI+KNLRVCGD
Sbjct: 468 SMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGD 527
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 528 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
>gi|388508872|gb|AFK42502.1| unknown [Medicago truncatula]
Length = 565
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 178/398 (44%), Positives = 260/398 (65%), Gaps = 26/398 (6%)
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
++ L +EGKVKEA+E L+EK I D F L CG +K++E+AK VH++
Sbjct: 192 SIVDLTRFCQEGKVKEALE---LMEKG-IKADANCFEILFDLCGKSKSVEDAKKVHDYF- 246
Query: 438 RLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
L S R +N +++MY C SM DA VF +M R++ SW MI G+A + +G++
Sbjct: 247 -LQSTFRSDFKMHNKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEG 305
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +F Q + GL+ + + V SAC + V + ++ ESM YGI P ++HY+ ++D
Sbjct: 306 LQLFEQMNELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLD 365
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+LG +GYL EA EFIE++P EP V V+E L N R+HG+++L D E++ LDPS
Sbjct: 366 VLGQSGYLKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPS---- 421
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
K+ A +P KK + ++L+ ++++ EY+ T + + +K+ A+
Sbjct: 422 KAVANKIPTPPP--------KKYTAISMLDGKNRIIEYK-NPTLYKDDEKLIAM-----N 467
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
MK+AGY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+P R P+RI+KNLRVCGD
Sbjct: 468 SMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGD 527
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 528 CHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 565
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/392 (44%), Positives = 252/392 (64%), Gaps = 13/392 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI++ +++Q I D TF+ + +C L+E K++H+ + L V + ++
Sbjct: 382 EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALV 441
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C SMDDA VF+ M+ER++ +W MITG A++G +A++ F Q K+ G+KPD
Sbjct: 442 SMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKV 501
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F V SAC+ +G V EG HF SM DYGI P ++HY VD+LG G+L+EA I
Sbjct: 502 TFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILT 561
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS----- 627
MP +P VW L++ CR+H ++E G+R AE V +LDP ++ + L + A+
Sbjct: 562 MPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPD--DDGAYVALSNIYAAAGRYE 619
Query: 628 ------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
++ ++++ K Q+ +EV KVH + D SHPE +IYA + L Q+KE G
Sbjct: 620 DAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQG 679
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TRFVLHD+D+E K + L +HSERLA+++GL+ +P PIRI+KNLRVCGDCH+A K
Sbjct: 680 YVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASK 739
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+VGRE+I RDA RFHHF DG+CSC D+W
Sbjct: 740 FISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 125/243 (51%), Gaps = 15/243 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+V A+E+L +++ ++ + T++ ++Q C ALE K VH ++ +
Sbjct: 270 IAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY 329
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY +C + +A +F ++ RD+ +W M+TG+A+ G ++A+D+F +
Sbjct: 330 GREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRR 389
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+Q G+KPD F ++CS+ + EG +H + + Y + ++ ++V M
Sbjct: 390 MQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQS--ALVSMYAKC 447
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G +D+A +M E +V W ++ C HG RC E +E + + K G
Sbjct: 448 GSMDDARLVFNQMS-ERNVVAWTAMITGCAQHG------RCREALEYFE-----QMKKQG 495
Query: 621 LVP 623
+ P
Sbjct: 496 IKP 498
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K+G++KEA+ +L + Q V F L+Q C ++LE+ + VH + L S ++
Sbjct: 71 LCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAI--LKSGIQ 128
Query: 445 VSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ Y N +L MY++C S+ DA VF + +R++ SW MI F +A +
Sbjct: 129 PNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETM 188
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K AG KPD F+ + +A + + G +H E + P + S+V M G
Sbjct: 189 KLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCG 246
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ--LDPSRLNEKS 617
+ +A +K+P E +V W L+ G +++ E ++Q + P+++ S
Sbjct: 247 DISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTS 303
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 4/180 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L+ A + + L+ + VH + + L ++ MY++C + A +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+++ +W +I G+A+ G + A+++ + +QA + P+ + + C+ +
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 529 EG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +H + YG + +++ M G L EA + +P DV W ++
Sbjct: 316 HGKKVHRYIIQSGYG--REIWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVT 372
>gi|125589603|gb|EAZ29953.1| hypothetical protein OsJ_14007 [Oryza sativa Japonica Group]
Length = 504
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 262/396 (66%), Gaps = 34/396 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VKEA+E L + D F +L AC + K LEE + +H+ R
Sbjct: 140 ELIGLGREGRVKEAVEKL----DKGARADPQAFYELAAACSNPKLLEELRKIHDFFLR-- 193
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +L+MY++C +M+ A F +M +R++ SW MI G+A NGLG+ A+ +
Sbjct: 194 SPFRADLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQL 253
Query: 499 FSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
F + K + G+ P F V +AC+ + E L+F++MS+D+GI P ++HYV I+++L
Sbjct: 254 FEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVL 313
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G +G+L+EA+E+IEK+P EP VWE L+NL RM+G+++L DR E++ LDP++
Sbjct: 314 GKSGHLNEAVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTK----- 368
Query: 618 KAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
VN +L ++L N+L+ R+K+ EYR P+ +K +
Sbjct: 369 ------VNPKKLPTPPPKRRLGI-NMLDGRNKLVEYRLP----PKIEK---------KVV 408
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH
Sbjct: 409 NEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCH 468
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 469 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 504
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/369 (45%), Positives = 241/369 (65%), Gaps = 13/369 (3%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++AC ALE+ K VH + ++ L VS NG++ MY +C ++DA VFS + E D
Sbjct: 4 ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ SW+ MI+G A++G G++AV +F Q Q G+KP+ F+ V S CS G V EG +F+
Sbjct: 64 VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
SM++D+GI P +HY +VD+ G G LDEAL FI +MP+EP+ VW L+ CR+HGN+
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQNLL 644
EL +R E + +L P N + L + A+ ++ K++ KK + +
Sbjct: 184 ELAERAVEQLIELTPE--NPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWI 241
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
EV++KVH + GD+SHP+ ++IY + L QMK AGYIP T FVLHD+++E KE L
Sbjct: 242 EVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGH 301
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ G++S+P IR++KNLRVCGDCH+A K IS+IV RE+++RD RFHHFKD
Sbjct: 302 HSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKD 361
Query: 765 GLCSCRDYW 773
G CSC DYW
Sbjct: 362 GQCSCGDYW 370
>gi|125547430|gb|EAY93252.1| hypothetical protein OsI_15058 [Oryza sativa Indica Group]
Length = 407
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 262/396 (66%), Gaps = 34/396 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+L GL +EG+VKEA+E L + D F +L AC + K LEE + +H+ R
Sbjct: 43 ELIGLGREGRVKEAVEKLD----KGARADPQAFYELAAACSNPKLLEELRKIHDFFLR-- 96
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SP R + N +L+MY++C +M+ A F +M +R++ SW MI G+A NGLG+ A+ +
Sbjct: 97 SPFRADLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQL 156
Query: 499 FSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
F + K + G+ P F V +AC+ + E L+F++MS+D+GI P ++HYV I+++L
Sbjct: 157 FEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVL 216
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G +G+L+EA+E+IEK+P EP VWE L+NL RM+G+++L DR E++ LDP++
Sbjct: 217 GKSGHLNEAVEYIEKLPFEPTATVWESLLNLARMNGDIDLEDRAEELLVSLDPTK----- 271
Query: 618 KAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
VN +L ++L N+L+ R+K+ EYR P+ +K +
Sbjct: 272 ------VNPKKLPTPPPKRRLGI-NMLDGRNKLVEYRLP----PKIEK---------KVV 311
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH
Sbjct: 312 NEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCH 371
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 372 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 407
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 264/441 (59%), Gaps = 33/441 (7%)
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISV 408
N M A QV DD E + ++ + GL + G EA + + ++ I
Sbjct: 485 NTMYAKQVF------DDMVERNVTTWT----VMISGLAQHGCGHEAFSLFLQMLREGIVP 534
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFS 466
D T+ ++ AC ALE K VH H L+S LRV N ++ MY++C S+DDA
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVG--NALVHMYAKCGSVDDARR 592
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF +M ERD+ SW MI G A++G G DA+D+F + K G KP+ F+ V SACS G
Sbjct: 593 VFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGL 652
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V EG F S+++DYGI P+M+HY +VD+LG G L+EA FI MP+EP W L+
Sbjct: 653 VDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALL 712
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL-- 644
C +GNLE+ + A+ E+L +L KS + V ++ A +KL ++++
Sbjct: 713 GACVTYGNLEMAEFAAK--ERL---KLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQR 767
Query: 645 ------------EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHD 692
EV +++H + GDTSHPE+ +IYA ++ L ++K GY+P+TR VL +
Sbjct: 768 RGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRN 827
Query: 693 IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELI 752
DQE KE+AL +HSE+LA+ +GL+ +P R PIR+ KNLRVC DCH+A K ISK+ GRE++
Sbjct: 828 TDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIV 887
Query: 753 IRDAKRFHHFKDGLCSCRDYW 773
RDAKRFHHFKDG+CSC DYW
Sbjct: 888 ARDAKRFHHFKDGVCSCGDYW 908
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 6/224 (2%)
Query: 372 SSQNNGTLEQLDGLVKEGKV-KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
+ +N T + G V + K +EA+ + + ++ D TF ++ A +ALE K
Sbjct: 397 AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVK 456
Query: 431 AVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
VH + ++ L LRV N ++ MY++C + A VF +M ER++T+W MI+G A++
Sbjct: 457 EVHSYAIDAGLVDLRVG--NALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G G +A +F Q + G+ PD ++ + SAC++ G +E + S + + G+V ++
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG-ALEWVKEVHSHAVNAGLVSDLRV 573
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++V M G +D+A + M +E DV W ++ HG
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG--DAKALEEAKAVHEHVER 438
+ GL + G+ +EA + +E+ +L T+ ++ A ALE K VH+H +
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGK 262
Query: 439 --LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
+S LRV N ++ MY++C S+DDA VF M +RD+ SW+ MI G A+NG G +A
Sbjct: 263 AGFISDLRVG--NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAF 320
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
IF + +Q G PD ++ + + + G E + + + G+V ++ + V M
Sbjct: 321 TIFLKMQQEGFVPDSTTYLSLLNTHVSTG-AWEWVKEVHKHAVEVGLVSDLRVGSAFVHM 379
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D+A +K+ + +V W ++
Sbjct: 380 YIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 6/215 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G ++A++V + ++ + T+ +++AC +L+ K +H H+ +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S +RV T ++ MY +C S+DDA +F M ER++ SW MI G A G G++A
Sbjct: 61 FQSDVRVET--ALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q ++ G P+ ++ + +A ++ G +E + S + + G+ ++ ++V M
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAG-ALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 177
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+G +D+A + M +E D+ W ++ HG
Sbjct: 178 KSGSIDDARVVFDGM-VERDIFSWTVMIGGLAQHG 211
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL G+ +EA ++++ + T+ ++ A A ALE K VH H
Sbjct: 102 MIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 161
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + N ++ MY++ S+DDA VF M ERD+ SW MI G A++G G++A +F
Sbjct: 162 LALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFL 221
Query: 501 QFKQAGLKPDDQIFIGVF--SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
Q ++ G P+ ++ + SA ++ G +E + + G + ++ +++ M
Sbjct: 222 QMERGGCLPNLTTYLSILNASAITSTG-ALEWVKEVHKHAGKAGFISDLRVGNALIHMYA 280
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D+A + M + DV W ++
Sbjct: 281 KCGSIDDARLVFDGM-CDRDVISWNAMI 307
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ GL + G EA + ++++ D T+ L+ A E K VH+H
Sbjct: 306 MIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVG 365
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S LRV + + MY C S+DDA +F + R++T+W+ MI G A+ G +A+ +
Sbjct: 366 LVSDLRVGS--AFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q ++ G PD F+ + SA + + +E + S + D G+V ++ ++V M
Sbjct: 424 FLQMRREGFFPDATTFVNILSA-NVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYA 481
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G A + + M +E +V W +++ HG
Sbjct: 482 KCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHG 515
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 252/393 (64%), Gaps = 14/393 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI + +++Q I D TF+ ++ +C L+E K +H+ + L V + ++
Sbjct: 333 EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALV 392
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF-AKNGLGEDAVDIFSQFKQAGLKPDD 511
MY++C SMDDA VF+ M+ER++ +W +ITG A++G +A++ F Q K+ G+KPD
Sbjct: 393 SMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDK 452
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F V SAC+ +G V EG HF SM DYGI P ++HY VD+LG G+L+EA I
Sbjct: 453 VTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVIL 512
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS---- 627
MP P VW L++ CR+H ++E G+R AE V +LDP ++ + L + A+
Sbjct: 513 SMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPD--DDGAYVALSSIYAAAGRY 570
Query: 628 -------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
++ ++++ K Q+ +EV KVH + D SHPE+++IY + L Q+KE
Sbjct: 571 EDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEM 630
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+TRFVLHD+D+E KE L +HSERLA+++GL+ +P PIRI+KNLRVCGDCH+A
Sbjct: 631 GYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTAT 690
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K ISK+VGRE+I RDA+RFHHF DG+CSC D+W
Sbjct: 691 KFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 128/244 (52%), Gaps = 16/244 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+V A+E+L +++ ++ + TF+ ++Q C ALE K VH ++ +
Sbjct: 221 IAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGY 280
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY +C +++A +FS++ RD+ +W M+TG+A+ G ++A+++F +
Sbjct: 281 GRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRR 340
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+Q G+KPD F V ++CS+ + EG +H + + Y + ++ ++V M
Sbjct: 341 MQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQS--ALVSMYAKC 398
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G +D+A +M E +V W ++ C HG RC E +E D + K
Sbjct: 399 GSMDDASLVFNQMS-ERNVVAWTAIITGCCAQHG------RCREALEYFD-----QMKKQ 446
Query: 620 GLVP 623
G+ P
Sbjct: 447 GIKP 450
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K G++KEA+ ++ + Q V F L+Q C ++LE+ + VH + L S ++
Sbjct: 22 LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAI--LKSGIQ 79
Query: 445 VSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ Y N +L MY++C S+ DA VF ++ +R++ SW MI F +A +
Sbjct: 80 PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM 139
Query: 503 KQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
K AG KPD F+ + +A + LG V H E + + P + S+V M
Sbjct: 140 KLAGCKPDKVTFVSLLNAFTNPELLQLGQKV----HMEIVEAGLELEPRVG--TSLVGMY 193
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
G + +A +++P E +V W L+ G +++ E ++Q
Sbjct: 194 AKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVALELLETMQQ 242
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L+ A + + L+ + VH + L ++ MY++C + A +F
Sbjct: 147 DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIF 206
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+++ +W +I G+A+ G + A+++ +QA + P+ F + C+ +
Sbjct: 207 DRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALE 266
Query: 529 EG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +H + YG + S++ M G L+EA + +P DV W ++
Sbjct: 267 HGKKVHRYIIQSGYG--RELWVVNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVT 323
>gi|358248494|ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/392 (45%), Positives = 251/392 (64%), Gaps = 20/392 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L +EG + + +E++G Q D + L+ C ++LE K VHE + R
Sbjct: 78 LVALCEEGNLDQVLELMG----QGAVADYRVYLALLNLCEHTRSLESGKRVHEILRRSAF 133
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY +C S+ +A VF M +R++ +W MI G+ NGLG D + +F Q
Sbjct: 134 RGDVELSNRLIGMYCKCGSVKNARRVFDQMLDRNMATWHLMIGGYTSNGLGCDGLLVFQQ 193
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
KQA L PD + F V +ACS V EG LHFESM K+YGIVPSM+HY+ +++++G+ G
Sbjct: 194 MKQAELPPDGETFELVLAACSQAEAVEEGFLHFESM-KEYGIVPSMEHYLEVINIMGNAG 252
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA EFIE +P+E V+ WE L R+HG+L+L D E++ + DPS K+ A
Sbjct: 253 QLKEAEEFIENVPIELGVEAWESLRKFARIHGDLDLEDCAEELLTRFDPS----KAIADK 308
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
+P KK + N+LE +++ EYR S P ++ + GL QM+EAG
Sbjct: 309 LPTPP--------RKKQSDVNMLEEKNRATEYR---YSIPYKEEDNEKLGGLSGQMREAG 357
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+K
Sbjct: 358 YVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIK 417
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 418 IMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 449
>gi|224070865|ref|XP_002303271.1| predicted protein [Populus trichocarpa]
gi|222840703|gb|EEE78250.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/349 (48%), Positives = 241/349 (69%), Gaps = 22/349 (6%)
Query: 427 EEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
E+AK VH++ L S R V N ++KMY +C SM DA VF +M ER++ SW MI
Sbjct: 6 EDAKKVHDYF--LQSTFRGDVKLNNNVIKMYGKCGSMADARRVFDHMPERNMDSWHLMIN 63
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
+A N LG++ +++F Q K+ GL+P + F V SAC++ V EG L+FE MS+++GI
Sbjct: 64 EYANNDLGDEGLELFEQMKKLGLEPTGETFHAVLSACASAEAVEEGFLYFEEMSREFGIS 123
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
P+++HY+SI+D+LG + YL+EA+E+IEK+P EP V++WE L R HG+++L D E+
Sbjct: 124 PTLEHYLSIIDVLGKSAYLNEAVEYIEKLPFEPTVEIWEALRKYARSHGDIDLEDHAEEL 183
Query: 605 VEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
+ LD S K+ A +P KK ++LE +++V E+R T + + +
Sbjct: 184 IVSLDSS----KAVANKIPTPPP--------KKYNLISMLEGKNRVAEFR-NPTFYKDDE 230
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
K+ L +MK GY+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+PAR P+
Sbjct: 231 KLKEL-----REMKTGGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARMPL 285
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RI+KNLRVCGDCH+A+KI+SKIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 286 RIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 334
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 259/426 (60%), Gaps = 27/426 (6%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
DD E + ++ + GL + G +A + ++ I D T+ ++ AC
Sbjct: 683 DDMVERNVTTWTM----MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAST 738
Query: 424 KALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
ALE K VH H L+S LRV N ++ MY++C S+DDA SVF +M ERD+ SW
Sbjct: 739 GALEWVKEVHNHAVSAGLVSDLRVG--NALVHMYAKCGSIDDARSVFDDMVERDVFSWTV 796
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI G A++G G +A+D F + K G KP+ ++ V +ACS G V EG F SM++DY
Sbjct: 797 MIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDY 856
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
GI P+M+HY +VD+LG G L+EA FI MP+EPD W L+ C +GNLE+ +
Sbjct: 857 GIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFA 916
Query: 602 AEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL--------------EVR 647
A+ E+L +L KS + V ++ A K +KL ++++ EV
Sbjct: 917 AK--ERL---KLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVD 971
Query: 648 SKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSE 707
+++H + GDTSHPE+ +IYA + L ++K GY+P+TR VL + DQE KE+AL +HSE
Sbjct: 972 NRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSE 1031
Query: 708 RLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLC 767
+LA+ +GL+ + ++ PIR+ KNLRVC DCH+A K ISKI GRE++ RDAKRFHHFKDG+C
Sbjct: 1032 KLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVC 1091
Query: 768 SCRDYW 773
SC DYW
Sbjct: 1092 SCGDYW 1097
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNG 450
+EA+ + ++++ D TF ++ A D +ALE K VH H L LRV N
Sbjct: 607 REALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVG--NA 664
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ YS+C ++ A VF +M ER++T+W MI G A++G G DA F Q + G+ PD
Sbjct: 665 LVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPD 724
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
++ + SAC++ G +E + + + G+V ++ ++V M G +D+A
Sbjct: 725 ATTYVSILSACASTG-ALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+ M +E DV W ++ HG
Sbjct: 784 DDM-VERDVFSWTVMIGGLAQHG 805
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL G+ +EA + ++++ + T+ ++ A A ALE K VH H
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + N ++ MY++ S+DDA VF MTERD+ SW MI G A++G G++A +F Q
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411
Query: 502 FKQAGLKPDDQIFIGVFSACS-ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G P+ ++ + +A + A +E + +++ G + ++ +++ M
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D+A + M + DV W +M
Sbjct: 472 GSIDDARLVFDGM-CDRDVISWNAMM 496
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G ++A+ V + ++C + T+ +++AC L+ K +H H+ +
Sbjct: 191 IGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGF 250
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S +RV T ++ MY +C S++DA +F M ER++ SW MI G A G G++A +F
Sbjct: 251 QSDVRVET--ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLF 308
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q ++ G P+ ++ + +A ++ G +E + S + + G+ ++ ++V M
Sbjct: 309 LQMQREGFIPNSYTYVSILNANASAG-ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 367
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+G +D+A + M E D+ W ++ HG
Sbjct: 368 SGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQHG 400
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VER-L 439
+ GL + G EA V ++++ + D T+ L+ G ALE VH+H VE L
Sbjct: 496 MGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL 555
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S RV + + MY C S+DDA +F ++ R +T+W+ MI G A+ G +A+ +F
Sbjct: 556 ISDFRVGS--AFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLF 613
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q ++ G PD FI + SA + + +E + S + D G+V ++ ++V
Sbjct: 614 LQMQREGFIPDATTFINILSA-NVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSK 671
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G + A + + M +E +V W ++ HG
Sbjct: 672 CGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHG 704
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 376 NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
+G EQ ++ K+A+ +L + +Q I++D ++ ++Q C + + AK VH
Sbjct: 87 DGAAEQTHNVIT---AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVC 143
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
+ + + N +L++Y C + A VF + ++++ W TMI G+A+ G EDA
Sbjct: 144 IIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDA 203
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIV 554
+ ++ + +Q +P++ ++ + AC ++ G +H + G ++ ++V
Sbjct: 204 MRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQS--GFQSDVRVETALV 261
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+M G +++A +KM +E +V W ++
Sbjct: 262 NMYVKCGSIEDAQLIFDKM-VERNVISWTVMI 292
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 260/405 (64%), Gaps = 18/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ GK + A + ++++ I D TF+ L+ AC +AL E + +H +
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V G++ MY++C S++DA VF + ++++ SW +MITG+A++G G++A+++F Q
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQ 706
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q G+KPD F+G SAC+ G + EG+ HF+SM K++ I P M+HY +VD+ G G
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L+EA+EFI KM +EPD VW L+ C++H N+EL ++ A+ +LDP+ N
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 615 EKSKAGLVPVNASELAKEKENK------KLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ AG+ E+AK ++ K Q+ +EV KVH + + D +HP+T++I+A
Sbjct: 826 IYAAAGM----WKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +M++ GY+P+TR+VLHD++ KE+AL HSERLA+++GLL +P PI I K
Sbjct: 882 ELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISK 941
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A K ISKI R++I RD+ RFHHFKDG+CSC D+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G+ K+A + +E++ + D F L++AC +ALE+ K VH ++ +
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ IL MY++C SM+DA VF + R++ SW MI GFA++G ++A F++
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G++P+ F+ + ACS+ + G + + YG ++ +++ M
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKC 461
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L +A EK+ + +V W ++
Sbjct: 462 GSLKDAHRVFEKIS-KQNVVAWNAMIT 487
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
FA+ + + N L +L K G+ EA++VL ++ I + T+S L+Q C K
Sbjct: 69 FADIKDTQKANAVLNRLS---KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L + + ++ H+++ + +N ++ MY++C + A +F +M E+D+ SW+ ++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ ++GL E+A + Q Q +KPD + F+ + +AC+ +V +G + + K G
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDT 244
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ ++++M G + +A + + +P D+ W ++ HG +
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFK 294
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGI 451
A+ L K+ I + TF+ ++ C + +LE K VH + + L S L VS N +
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS--NAL 555
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ M+ C + A ++F++M +RDL SW+T+I GF ++G + A D F +++G+KPD
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDK 615
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F G+ +AC++ + EG ++ + + ++ M G +++A +
Sbjct: 616 ITFTGLLNACASPEALTEGR-RLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFH 674
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
K+P + +V W ++ HG
Sbjct: 675 KLP-KKNVYSWTSMITGYAQHG 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G +EA ++ + + + D TF ++ AC DA+ +++ + ++ + +
Sbjct: 183 LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ M+ +C + DA VF N+ RDL +W +MITG A++G + A ++F +
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G++PD F+ + AC+ + +E + K+ G + +I+ M G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNH-PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+++ALE + + +V W ++ HG ++
Sbjct: 362 SMEDALEVFD-LVKGRNVVSWTAMIAGFAQHGRID 395
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G++ EA + + I + TF ++ AC AL+ + + +H+
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S RV T +L MY++C S+ DA VF ++++++ +W+ MIT + ++ ++A+ F
Sbjct: 445 GSDDRVRT--ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ G+KP+ F + + C + + G +HF M G+ + ++V M
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFV 560
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ G L A MP + D+ W ++ HG
Sbjct: 561 NCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHG 594
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 240/394 (60%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+V E+ + +Q + + T+ +++AC + AL+ K +H V + ++
Sbjct: 427 GQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVA 486
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY +C S++DA V M+ RD+ +W+T+I G A+NG G +A+ F K ++
Sbjct: 487 NALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMR 546
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ F+ V SAC V EG F SM KDYGIVP+ KHY +VD+L G+L EA +
Sbjct: 547 PNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAED 606
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
I MP +P +W L+ CR HGN+E+G++ AE +L+P + A
Sbjct: 607 VILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGM 666
Query: 628 --------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+L KE+ KK ++ +EV +VH + AGD SHP T++IY+ + L Q+K
Sbjct: 667 WRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKS 726
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
GY+P+TRFV+HD+DQEGKE A+ HSE+LA+++GL+S+P PIR+ KNLRVC DCH+A
Sbjct: 727 LGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTA 786
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K ISKI GRE+I RDA RFHHFK+G CSC DYW
Sbjct: 787 TKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMY 455
+VL L ++ VD + +L+Q+C AK L K VHEH+ R V N +LK+Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
C S+++A +F + + + SW+ MI+G+A GLG++A ++F+ +Q GL+PD F+
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 516 GVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ SACS+ + G +H M + G+ + +++ M G + +A + M
Sbjct: 150 SILSACSSPAALNWGREVHVRVM--EAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207
Query: 575 MEPDVDVWEKL 585
+V W L
Sbjct: 208 SRDEVS-WTTL 217
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 367 AEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKAL 426
A ASR + TL + G +E+++ + ++ + T+ ++ ACG AL
Sbjct: 205 AMASRDEVSWTTLT--GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAAL 262
Query: 427 EEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
E+ K +H + S +RVST + KMY +C ++ DA VF + RD+ +W+TMI
Sbjct: 263 EKGKQIHAQIVESEHHSDVRVST--ALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIG 320
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
G +G E+A +F + + + PD ++ + SAC+ G + G KD G+V
Sbjct: 321 GLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLV 379
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ ++++M G + +A + ++MP + DV W L+
Sbjct: 380 SDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALV 420
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 8/234 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D F+ S S N + G G +EA + L++++ + D TF ++ AC
Sbjct: 103 DKFSNKSVVSWN----VMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
AL + VH V + N ++ MY++C S+ DA VF M RD SW T+
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 218
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
+A++G ++++ + Q G++P ++ V SAC +L + +G +H + + ++
Sbjct: 219 GAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++ ++ M G + +A E E +P DV W ++ G LE
Sbjct: 279 --SDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGGLVDSGQLE 329
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 18/352 (5%)
Query: 244 NANVQNQYGPIHYGPGEVMQNRNGFNSQ--RFSESLGSFNGNCMQDTGQHQQALSGHYSG 301
NA V N ++ G V R F++ R S + G ++G Q++L +++
Sbjct: 179 NATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG-AYAESGYAQESLKTYHAM 237
Query: 302 -NFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNC 360
G+ + ++ G + +Q E ++ S +++ +++ C
Sbjct: 238 LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS---DVRVSTALTKMYIKC 294
Query: 361 KHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
D E N + + GLV G+++EA + + K+C++ D T+ ++
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 418 QACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
AC L K +H + L+S +R N ++ MYS+ SM DA VF M +RD
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFG--NALINMYSKAGSMKDARQVFDRMPKRD 412
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHF 534
+ SW ++ G+A G ++ F + Q G++ + ++ V ACS + G +H
Sbjct: 413 VVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHA 472
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
E + GI + +++ M G +++A+ E M DV W L+
Sbjct: 473 EVVKA--GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLI 521
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 259/405 (63%), Gaps = 18/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ GK + A + ++++ I D TF+ L+ AC +AL E + +H +
Sbjct: 587 IAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF 646
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V G++ MY++C S++DA VF + ++++ SW +MI G+A++G G++A+++F Q
Sbjct: 647 DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQ 706
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q G+KPD F+G SAC+ G + EG+ HF+SM K++ I P M+HY +VD+ G G
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L+EA+EFI KM +EPD VW L+ C++H N+EL ++ A+ +LDP+ N
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 615 EKSKAGLVPVNASELAKEKENK------KLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ AG+ E+AK ++ K Q+ +EV KVH + + D +HP+T++I+A
Sbjct: 826 IYAAAGM----WKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +M++ GY+P+TR+VLHD++ KE+AL HSERLA+++GLL +P PI I K
Sbjct: 882 ELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISK 941
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A K ISKI R++I RD+ RFHHFKDG+CSC D+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 4/207 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G+ K+A + +E++ + D F L++AC +ALE+ K VH ++ +
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ IL MY++C SM+DA VF + R++ SW MI GFA++G ++A F++
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G++P+ F+ + ACS+ + G + + YG ++ +++ M
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKC 461
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L +A EK+ + +V W ++
Sbjct: 462 GSLKDAHRVFEKIS-KQNVVAWNAMIT 487
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
FA+ + + N L +L K G+ EA++VL ++ I + T+S L+Q C K
Sbjct: 69 FADIKDTQKANAVLNRLS---KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L + + ++ H+++ + N ++ MY++C + A +F +M E+D+ SW+ ++ G
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ ++GL E+A + Q Q +KPD + F+ + +AC+ +V +G + + K G
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDT 244
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ ++++M G + +A + + +P D+ W ++ HG +
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTR-DLVTWTSMITGLARHGRFK 294
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 6/202 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGI 451
A+ L K+ I + TF+ ++ C + +LE K VH + + L S L VS N +
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVS--NAL 555
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ M+ C + A ++F++M +RDL SW+T+I GF ++G + A D F +++G+KPD
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDK 615
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F G+ +AC++ + EG ++ + + ++ M G +++A +
Sbjct: 616 ITFTGLLNACASPEALTEGR-RLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFH 674
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
K+P + +V W ++ HG
Sbjct: 675 KLP-KKNVYSWTSMIAGYAQHG 695
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G +EA ++ + + + D TF ++ AC DA+ +++ + ++ + +
Sbjct: 183 LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ M+ +C + DA VF N+ RDL +W +MITG A++G + A ++F +
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G++PD F+ + AC+ + +E + K+ G + +I+ M G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNH-PEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+++ALE + + +V W ++ HG ++
Sbjct: 362 SMEDALEVFD-LVKGRNVVSWTAMIAGFAQHGRID 395
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G++ EA + + I + TF ++ AC AL+ + + +H+
Sbjct: 385 IAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGY 444
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S RV T +L MY++C S+ DA VF ++++++ +W+ MIT + ++ ++A+ F
Sbjct: 445 GSDDRVRT--ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ G+KP+ F + + C + + G +HF M G+ + ++V M
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFV 560
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ G L A MP + D+ W ++ HG
Sbjct: 561 NCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHG 594
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 248/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ + +++ S++ TF + C D ALE K +H ++
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+D+A F + E+D+ SW+TM+ G+A++G G A+ +F
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFES 485
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K AG+KPD+ +GV SACS G + G +F SM+KDYG++P+ KHY ++D+LG G
Sbjct: 486 MKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG 545
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNE 615
L+EA + I MP +P W L+ R+HGN ELG++ AE+V +++P L+
Sbjct: 546 RLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSN 605
Query: 616 KSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A V+A ++ + + +K+ + +EV++K+H + GD SHPE ++IYA +
Sbjct: 606 LYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEE 665
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+E GY+ T+ VLHD+++E KE L HSE+LAV+ G+L+ P PIR+MKNLRV
Sbjct: 666 LDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRV 725
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K ISKIVGR +I+RD+ RFHHF +G CSC DYW
Sbjct: 726 CEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R +S++N ++ Y + + A F M +RD SW +I G+A++G E+A+++F
Sbjct: 324 PCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ KQ G + F S C+ + + G +H +++ YG + + +++ M
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFK 441
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +DEA + E + E DV W ++ HG
Sbjct: 442 CGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y + DA +F M E+D+ SW+++++G+A+NG ++A ++F +
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE-- 170
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + G+ +A G + E L FES S D+ ++ + ++ L +A
Sbjct: 171 --KNSISWNGLLAAYVHNGRIEEACLLFESKS-DWDLIS----WNCLMGGFVRKKKLGDA 223
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+KMP+ D W +++
Sbjct: 224 RWLFDKMPVR-DAISWNTMIS 243
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 32/246 (13%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
SG QNG + A +V +N ++ S NG L V G+++EA LL
Sbjct: 150 SGYAQNGYVDEAREVFDNMPEKN-------SISWNGLLA---AYVHNGRIEEAC----LL 195
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDS 460
+ DL +++ LM K L +A+ + + + P+R ++N ++ Y++
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM-----PVRDAISWNTMISGYAQGGG 250
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F RD+ +W M++G+ +NG+ ++A F + + + + G
Sbjct: 251 LSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT 310
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
D+ + FESM ++ + +++ G G + +A +F + MP + D
Sbjct: 311 KKM--DIAREL--FESMP-----CRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCV 360
Query: 581 VWEKLM 586
W ++
Sbjct: 361 SWAAII 366
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
D A VF+ M R S++ MI+G+ +N A ++F Q + L + + G C
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 522 SALGDVVEGMLHFESMSKDYGIVPS--MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
LGD + + ++P + + S++ GY+DEA E + MP E +
Sbjct: 126 R-LGDA----------RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP-EKNS 173
Query: 580 DVWEKLMNLCRMHGNLE 596
W L+ +G +E
Sbjct: 174 ISWNGLLAAYVHNGRIE 190
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N +L Y++ +D+A VF NM E++ SW+ ++ + NG E+A +F
Sbjct: 142 VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSD 201
Query: 505 AGLKPDDQIFIGVFSACSALGDV--------VEGMLHFESMSKDY----GIVPSMK---- 548
L + +G F LGD V + + +M Y G+ + +
Sbjct: 202 WDLISWN-CLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE 260
Query: 549 -------HYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+ ++V G LDEA F ++MP + +V
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV 298
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 248/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ + +++ S++ TF + C D ALE K +H ++
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+D+A F + E+D+ SW+TM+ G+A++G G A+ +F
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFES 485
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K AG+KPD+ +GV SACS G + G +F SM+KDYG++P+ KHY ++D+LG G
Sbjct: 486 MKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG 545
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNE 615
L+EA + I MP +P W L+ R+HGN ELG++ AE+V +++P L+
Sbjct: 546 RLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSN 605
Query: 616 KSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A V+A ++ + + +K+ + +EV++K+H + GD SHPE ++IYA +
Sbjct: 606 LYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEE 665
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+E GY+ T+ VLHD+++E KE L HSE+LAV+ G+L+ P PIR+MKNLRV
Sbjct: 666 LDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRV 725
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K ISKIVGR +I+RD+ RFHHF +G CSC DYW
Sbjct: 726 CEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 52/247 (21%)
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G +F M+++Y + P+ KHY ++D+LG L+E L+
Sbjct: 783 GAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG-----------------ALLGAS 825
Query: 590 RMHGNLELGDRCAEIVEQLDP--SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVR 647
R+HGN ELG++ A++ ++ P S +++ G+ +K+ + EV+
Sbjct: 826 RIHGNTELGEKAAQMFFKMGPQNSGISKMRDVGV--------------QKVPGYSWFEVQ 871
Query: 648 SKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSE 707
+K+H + G E + I G++ E + + +E KE L SE
Sbjct: 872 NKIHTFSVGLFLSRERENI--------------GFLEELDLKMRE-REEEKERTLKYLSE 916
Query: 708 RLAVSHGLLSSPARAPIRIMKN-LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
LA + G+L+ P P R+MK + VC DC SA+K +SKIVGR + +RD+ H F + +
Sbjct: 917 NLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFNESI 973
Query: 767 CSCRDYW 773
CSC +YW
Sbjct: 974 CSCGEYW 980
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R +S++N ++ Y + + A F M +RD SW +I G+A++G E+A+++F
Sbjct: 324 PCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ KQ G + F S C+ + + G +H +++ YG + + +++ M
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN--ALLAMYFK 441
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +DEA + E + E DV W ++ HG
Sbjct: 442 CGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHG 474
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y + DA +F M E+D+ SW+++++G+A+NG ++A ++F +
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE-- 170
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + G+ +A G + E L FES S D+ ++ + ++ L +A
Sbjct: 171 --KNSISWNGLLAAYVHNGRIEEACLLFESKS-DWDLIS----WNCLMGGFVRKKKLGDA 223
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+KMP+ D W +++
Sbjct: 224 RWLFDKMPVR-DAISWNTMIS 243
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 32/246 (13%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
SG QNG + A +V +N ++ S NG L V G+++EA LL
Sbjct: 150 SGYAQNGYVDEAREVFDNMPEKN-------SISWNGLLA---AYVHNGRIEEAC----LL 195
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDS 460
+ DL +++ LM K L +A+ + + + P+R ++N ++ Y++
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM-----PVRDAISWNTMISGYAQGGG 250
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F RD+ +W M++G+ +NG+ ++A F + + + + G
Sbjct: 251 LSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT 310
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
D+ + FESM ++ + +++ G G + +A +F + MP + D
Sbjct: 311 KKM--DIAREL--FESMP-----CRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCV 360
Query: 581 VWEKLM 586
W ++
Sbjct: 361 SWAAII 366
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
D A VF+ M R S++ MI+G+ +N A ++F Q + L + + G C
Sbjct: 66 DSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNC 125
Query: 522 SALGDVVEGMLHFESMSKDYGIVPS--MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
LGD + + ++P + + S++ GY+DEA E + MP E +
Sbjct: 126 R-LGDA----------RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP-EKNS 173
Query: 580 DVWEKLMNLCRMHGNLE 596
W L+ +G +E
Sbjct: 174 ISWNGLLAAYVHNGRIE 190
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N +L Y++ +D+A VF NM E++ SW+ ++ + NG E+A +F
Sbjct: 142 VVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSD 201
Query: 505 AGLKPDDQIFIGVFSACSALGDV--------VEGMLHFESMSKDY----GIVPSMK---- 548
L + +G F LGD V + + +M Y G+ + +
Sbjct: 202 WDLISWN-CLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE 260
Query: 549 -------HYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+ ++V G LDEA F ++MP + +V
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV 298
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 164/408 (40%), Positives = 249/408 (61%), Gaps = 23/408 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+D K +EA+E+ +E Q + TF+ L+ + + + +H V +
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L S N ++ MYS C +++ AF VF +M +R++ SW ++ITGFAK+G A+++F +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P++ +I V SACS +G V EG HF+SM ++G++P M+HY IVD+LG +G
Sbjct: 569 MLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSG 628
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------- 610
L EA++FI MP + D VW + CR+HGNLELG A+++ + +P
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688
Query: 611 -----SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
S+ +E S N + KEK K A + +EV +KVH++ GDTSHP+ +
Sbjct: 689 LYASISKWDEVS-------NIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAE 741
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY ++ L ++K+ GY+P FVLHD+++E KE+ L HSE++AV+ GL+S+ PIR
Sbjct: 742 IYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIR 801
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLR+CGDCHSA+K IS GRE+I+RDA RFHH KDG CSC +YW
Sbjct: 802 VFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G++ +AI L + Q DL T+S ++ C ++ + VHE + + L
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 446 STYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
T N ++ +YS+C + A S+F M + RDL SW M++ FA N +G A+ F +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM-LGSTGYL 563
G P++ F ACS V G F + K + + ++DM + G L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
A + EKMP E + W ++
Sbjct: 222 VSAFKVFEKMP-ERNAVTWTLMIT 244
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE 437
+ G V++G E E L L ++ +P TFS ++AC + AL + V H
Sbjct: 346 MITGYVQKGGYDE--EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+L N ++ MY+ +DDA F + E++L S++T+I +AKN E+A++
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
+F++ + G+ F + S +++G + +G +H + + S+ + +++ M
Sbjct: 464 LFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISM 521
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + E M + +V W ++ HG
Sbjct: 522 YSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L++ G EAI++ + D T S ++ AC + + L + +H R L
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 445 VSTYNGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDAVDIFS 500
++ MY++C SM A +F + + ++ SW MITG+ K G E+A+D+F
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK-DYGIVPSMKHYVSIVDMLGS 559
+ P+ F AC+ L + G F K + V + + S++ M
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVAN--SLISMYAR 423
Query: 560 TGYLDEA 566
+G +D+A
Sbjct: 424 SGRIDDA 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ AF VF M ER+ +W MIT + G +A+D+F +G +PD GV SA
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 521 CSALGDVVEG 530
C+ + ++ G
Sbjct: 281 CANMELLLLG 290
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 178/463 (38%), Positives = 269/463 (58%), Gaps = 24/463 (5%)
Query: 325 DQSRRQYQQNP--NEGQYQ-SYSGNIQNGMMASQ--VLNNCKHEDDFAEASRSSQNNGTL 379
D R +++ P N G + SG QNG +A + + D + A+
Sbjct: 298 DMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAA--------- 348
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G +EA+ +L +++ S++ TF + AC D ALE K VH V R
Sbjct: 349 -IIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRT 407
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
N ++ MY +C +D+A+ VF + +D+ SW+TM+ G+A++G G A+ +F
Sbjct: 408 GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVF 467
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
AG+KPD+ +GV SACS G G +F SM+KDYGI P+ KHY ++D+LG
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------L 613
G L+EA I MP EPD W L+ R+HGN+ELG++ AE+V +++P L
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLL 587
Query: 614 NEKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A V+ S++ ++ +K + +EV++K+H + GD HPE +IYA +
Sbjct: 588 SNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFL 647
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +MK GY+ T+ VLHD+++E K+ L HSE+LAV+ G+L+ P+ PIR+MKNL
Sbjct: 648 EELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNL 707
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A+K ISKIVGR +I+RD+ R+HHF +G+CSCRDYW
Sbjct: 708 RVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 381 QLDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
L G V+ G V EA +V + K IS ++ L+ A + LEEA+ + E
Sbjct: 132 MLSGYVRSGHVDEARDVFDRMPHKNSIS-----WNGLLAAYVRSGRLEEARRLFESK--- 183
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S + + N ++ Y + + + DA +F + RDL SW+TMI+G+A++G A +F
Sbjct: 184 -SDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF 242
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ P +F + + D GML + + + +P + V + G
Sbjct: 243 EE------SPVRDVFTWTAMVYAYVQD---GML--DEARRVFDEMPQKREMSYNVMIAGY 291
Query: 560 TGY--LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
Y +D E E+MP P++ W +++ +G+L +++ Q D
Sbjct: 292 AQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRD 342
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y+ + DA +F +M E+D+ SW+ M++G+ ++G ++A D+F +
Sbjct: 97 SWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPH-- 154
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS---MKHYVSIVDMLGSTGYL 563
+ + G+ +A G + E FES S D+ ++ M YV +MLG
Sbjct: 155 --KNSISWNGLLAAYVRSGRLEEARRLFESKS-DWELISCNCLMGGYVK-RNMLG----- 205
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
+A + +++P+ D+ W +++ G+L R E
Sbjct: 206 -DARQLFDQIPVR-DLISWNTMISGYAQDGDLSQARRLFE 243
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 442 PLRVS-TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
PLR S +YN ++ Y A +F M +DL SW+ M+TG+A+N DA +F
Sbjct: 60 PLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFD 119
Query: 501 QFKQAGLKPDDQIFIGVFSA--CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + + + G + DV + M H S+S + G++ + YV
Sbjct: 120 SMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWN-GLLAA---YV------- 168
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE---LGD 599
+G L+EA E + D WE + C M G ++ LGD
Sbjct: 169 RSGRLEEARRLFES---KSD---WELISCNCLMGGYVKRNMLGD 206
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 247/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG K K +EA + + I + TF+ L+ A+ + + +H + +
Sbjct: 97 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 156
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C +++ AF VF+ M +R++ SW +MITGFAK+G A+++F +
Sbjct: 157 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 216
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G KP++ ++ V SACS +G + EG HF SM K++GIVP M+HY +VD+LG +G
Sbjct: 217 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 276
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA+EFI MP+ D VW L+ CR+HGN ELG AE++ + +P S
Sbjct: 277 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 336
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L+ + V + KE+ K A + +EV ++VH + G+TSHP+ +IY +
Sbjct: 337 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 396
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +++KE GYIP+T FVLHDI++E KE+ L HSE++AV+ GL+S+ PIRI KNLRV
Sbjct: 397 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 456
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K IS GRE+++RD+ RFHH K+G+CSC DYW
Sbjct: 457 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY+ M+DA F + E++L S++ ++ G+AKN E+A +F++ G+
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 122
Query: 509 PDDQIFIGVFSACSALGDVVEG 530
F + S +++G + +G
Sbjct: 123 ISAFTFASLLSGAASIGAMGKG 144
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 246/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+D K +EA+E+ +E Q + TF+ L+ + + + +H V +
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L S N ++ MYS C +++ AF VF +M +R++ SW ++ITGFAK+G A+++F +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P+ +I V SACS +G V EG HF+SM ++G++P M+HY +VD+LG +G
Sbjct: 569 MLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSG 628
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA++FI MP + D VW + CR+HGNLELG A+++ + +P S
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L + N + KEK K A + +EV +KVH++ GDTSHP+ +IY ++
Sbjct: 689 LYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQN 748
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++K+ GY+P FVLHD+++E KE+ L HSE++AV+ GL+S+ PIR+ KNLR+
Sbjct: 749 LSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRI 808
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA+K IS GRE+I+RDA RFHH KDG CSC +YW
Sbjct: 809 CGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G++ +AI L + Q DL T+S ++ C ++ + VHE + + L
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 446 STYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
T N ++ +YS+C + A S+F M + RDL SW M++ FA N +G A+ F +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM-LGSTGYL 563
G P++ F ACS V G F + K + + ++DM + G L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
A + EKMP E + W ++
Sbjct: 222 VSAFKVFEKMP-ERNAVTWTLMIT 244
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 9/217 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE 437
+ G V++G E E L L ++ +P TFS ++AC + AL + V H
Sbjct: 346 MITGYVQKGGYDE--EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+L N ++ MY+ +DDA F + E++L S++T+I +AKN E+A++
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
+F++ + G+ F + S +++G + +G +H + + S+ + +++ M
Sbjct: 464 LFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISM 521
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + E M + +V W ++ HG
Sbjct: 522 YSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L++ G EAI++ + D T S ++ AC + + L + +H R L
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 445 VSTYNGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDAVDIFS 500
++ MY++C SM A +F + + ++ SW MITG+ K G E+A+D+F
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK-DYGIVPSMKHYVSIVDMLGS 559
+ P+ F AC+ L + G F K + V + + S++ M
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVAN--SLISMYAR 423
Query: 560 TGYLDEA 566
+G +D+A
Sbjct: 424 SGRIDDA 430
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ AF VF M ER+ +W MIT + G +A+D+F + +G +PD GV SA
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 521 CSALGDVVEG 530
C+ + ++ G
Sbjct: 281 CANMELLLLG 290
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 247/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG K K +EA + + I + TF+ L+ A+ + + +H + +
Sbjct: 234 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 293
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C +++ AF VF+ M +R++ SW +MITGFAK+G A+++F +
Sbjct: 294 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 353
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G KP++ ++ V SACS +G + EG HF SM K++GIVP M+HY +VD+LG +G
Sbjct: 354 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 413
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA+EFI MP+ D VW L+ CR+HGN ELG AE++ + +P S
Sbjct: 414 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 473
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L+ + V + KE+ K A + +EV ++VH + G+TSHP+ +IY +
Sbjct: 474 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 533
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +++KE GYIP+T FVLHDI++E KE+ L HSE++AV+ GL+S+ PIRI KNLRV
Sbjct: 534 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 593
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K IS GRE+++RD+ RFHH K+G+CSC DYW
Sbjct: 594 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++AI++ +E D T+S ++ AC + L K +H V RL L V
Sbjct: 35 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 94
Query: 449 NGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQ 504
++ MY++C S+DD+ VF M E ++ SW +IT +A++G ++A+++F +
Sbjct: 95 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 154
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++P+ F V AC L D G S + GI S++ M +G ++
Sbjct: 155 GHIRPNHFSFSSVLKACGNLSDPYTGE-QVYSYAVKLGIASVNCVGNSLISMYARSGRME 213
Query: 565 EA 566
+A
Sbjct: 214 DA 215
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A+ VF M ER+L +W MIT FA+ G DA+D+F + +G PD + V SAC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTGYLDEALEFIEKMPMEPDVD 580
LG + G S G+ + S+VDM + G +D++ + E+MP E +V
Sbjct: 69 LGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVM 126
Query: 581 VWEKLMN 587
W ++
Sbjct: 127 SWTAIIT 133
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEAIE+ + I + +FS +++ACG+ + V+ + +L N +
Sbjct: 143 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 202
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+ M+DA F + E++L S++ ++ G+AKN E+A +F++ G+
Sbjct: 203 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 262
Query: 512 QIFIGVFSACSALGDVVEG 530
F + S +++G + +G
Sbjct: 263 FTFASLLSGAASIGAMGKG 281
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 247/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG K K +EA + + I + TF+ L+ A+ + + +H + +
Sbjct: 229 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 288
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C +++ AF VF+ M +R++ SW +MITGFAK+G A+++F +
Sbjct: 289 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 348
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G KP++ ++ V SACS +G + EG HF SM K++GIVP M+HY +VD+LG +G
Sbjct: 349 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 408
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA+EFI MP+ D VW L+ CR+HGN ELG AE++ + +P S
Sbjct: 409 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 468
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L+ + V + KE+ K A + +EV ++VH + G+TSHP+ +IY +
Sbjct: 469 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 528
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +++KE GYIP+T FVLHDI++E KE+ L HSE++AV+ GL+S+ PIRI KNLRV
Sbjct: 529 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 588
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K IS GRE+++RD+ RFHH K+G+CSC DYW
Sbjct: 589 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++AI++ +E D T+S ++ AC + L K +H V RL L V
Sbjct: 30 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 89
Query: 449 NGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQ 504
++ MY++C S+DD+ VF M E ++ SW +IT +A++G ++A+++F +
Sbjct: 90 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 149
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++P+ F V AC L D G S + GI S++ M +G ++
Sbjct: 150 GHIRPNHFSFSSVLKACGNLSDPYTGE-QVYSYAVKLGIASVNCVGNSLISMYARSGRME 208
Query: 565 EA 566
+A
Sbjct: 209 DA 210
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A+ VF M ER+L +W MIT FA+ G DA+D+F + +G PD + V SAC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTGYLDEALEFIEKMPMEPDVD 580
LG + G S G+ + S+VDM + G +D++ + E+MP E +V
Sbjct: 64 LGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVM 121
Query: 581 VWEKLMN 587
W ++
Sbjct: 122 SWTAIIT 128
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEAIE+ + I + +FS +++ACG+ + V+ + +L N +
Sbjct: 138 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 197
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+ M+DA F + E++L S++ ++ G+AKN E+A +F++ G+
Sbjct: 198 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 257
Query: 512 QIFIGVFSACSALGDVVEG 530
F + S +++G + +G
Sbjct: 258 FTFASLLSGAASIGAMGKG 276
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 247/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG K K +EA + + I + TF+ L+ A+ + + +H + +
Sbjct: 409 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 468
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C +++ AF VF+ M +R++ SW +MITGFAK+G A+++F +
Sbjct: 469 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 528
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G KP++ ++ V SACS +G + EG HF SM K++GIVP M+HY +VD+LG +G
Sbjct: 529 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 588
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA+EFI MP+ D VW L+ CR+HGN ELG AE++ + +P S
Sbjct: 589 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 648
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L+ + V + KE+ K A + +EV ++VH + G+TSHP+ +IY +
Sbjct: 649 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 708
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +++KE GYIP+T FVLHDI++E KE+ L HSE++AV+ GL+S+ PIRI KNLRV
Sbjct: 709 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 768
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K IS GRE+++RD+ RFHH K+G+CSC DYW
Sbjct: 769 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ A L L+ +Q DL T+S L+++C + + K VH + + L
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 449 NGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ +YS+C + A +F M +RDL SW M++ FA N + A+ F + G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM-LGSTGYLDEA 566
P++ F V ACS G + + + K + + ++DM + +G L A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+ +KMP E ++ W ++
Sbjct: 185 YKVFDKMP-ERNLVTWTLMIT 204
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A+ VF M ER+L +W MIT FA+ G DA+D+F + +G PD + V SA
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTGYLDEALEFIEKMPMEP 577
C+ LG + G S G+ + S+VDM + G +D++ + E+MP E
Sbjct: 241 CTELGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EH 298
Query: 578 DVDVWEKLMN 587
+V W ++
Sbjct: 299 NVMSWTAIIT 308
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++AI++ +E D T+S ++ AC + L K +H V RL L V
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269
Query: 449 NGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQ 504
++ MY++C S+DD+ VF M E ++ SW +IT + ++G ++A+++F +
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++P+ F V AC L D G S + GI S++ M +G ++
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGE-QVYSYAVKLGIASVNCVGNSLISMYARSGRME 388
Query: 565 EA 566
+A
Sbjct: 389 DA 390
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEAIE+ + I + +FS +++ACG+ + V+ + +L N +
Sbjct: 318 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 377
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+ M+DA F + E++L S++ ++ G+AKN E+A +F++ G+
Sbjct: 378 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 437
Query: 512 QIFIGVFSACSALGDVVEG 530
F + S +++G + +G
Sbjct: 438 FTFASLLSGAASIGAMGKG 456
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 247/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG K K +EA + + I + TF+ L+ A+ + + +H + +
Sbjct: 427 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 486
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C +++ AF VF+ M +R++ SW +MITGFAK+G A+++F +
Sbjct: 487 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 546
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G KP++ ++ V SACS +G + EG HF SM K++GIVP M+HY +VD+LG +G
Sbjct: 547 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 606
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA+EFI MP+ D VW L+ CR+HGN ELG AE++ + +P S
Sbjct: 607 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 666
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L+ + V + KE+ K A + +EV ++VH + G+TSHP+ +IY +
Sbjct: 667 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 726
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +++KE GYIP+T FVLHDI++E KE+ L HSE++AV+ GL+S+ PIRI KNLRV
Sbjct: 727 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 786
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K IS GRE+++RD+ RFHH K+G+CSC DYW
Sbjct: 787 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 376 NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
N + QLD G++ A L L+ +Q DL T+S L+++C + + K VH
Sbjct: 14 NRLIRQLD----VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRK 69
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGED 494
+ + L N ++ +YS+C + A +F M +RDL SW M++ FA N +
Sbjct: 70 LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQ 129
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
A+ F + G P++ F V ACS G + + + K + + ++
Sbjct: 130 AIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELI 189
Query: 555 DM-LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
DM + +G L A + +KMP E ++ W ++
Sbjct: 190 DMFVKGSGDLGSAYKVFDKMP-ERNLVTWTLMIT 222
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A+ VF M ER+L +W MIT FA+ G DA+D+F + +G PD + V SA
Sbjct: 199 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 258
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTGYLDEALEFIEKMPMEP 577
C+ LG + G S G+ + S+VDM + G +D++ + E+MP E
Sbjct: 259 CTELGLLALGK-QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EH 316
Query: 578 DVDVWEKLMN 587
+V W ++
Sbjct: 317 NVMSWTAIIT 326
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++AI++ +E D T+S ++ AC + L K +H V RL L V
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287
Query: 449 NGILKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQ 504
++ MY++C S+DD+ VF M E ++ SW +IT + ++G ++A+++F +
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++P+ F V AC L D G S + GI S++ M +G ++
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGE-QVYSYAVKLGIASVNCVGNSLISMYARSGRME 406
Query: 565 EA 566
+A
Sbjct: 407 DA 408
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEAIE+ + I + +FS +++ACG+ + V+ + +L N +
Sbjct: 336 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 395
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+ M+DA F + E++L S++ ++ G+AKN E+A +F++ G+
Sbjct: 396 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 455
Query: 512 QIFIGVFSACSALGDVVEG 530
F + S +++G + +G
Sbjct: 456 FTFASLLSGAASIGAMGKG 474
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 244/397 (61%), Gaps = 17/397 (4%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVST 447
+V E+ + +Q + + T+ +++AC + AL+ K +H V + LL+ L V+
Sbjct: 412 QVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVT- 470
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ MY +C S++DA VF M+ RD+ +W+T+I G +NG G +A+ + K G+
Sbjct: 471 -NALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGM 529
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+P+ F+ V SAC V EG F MSKDYGIVP+ KHY +VD+L G+L EA
Sbjct: 530 RPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAE 589
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
+ I +P++P +W L+ CR+H N+E+G+R AE +L+P N L + A+
Sbjct: 590 DVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQ--NAGLYVSLSAIYAA 647
Query: 628 -----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ KE+ KK ++ +E+ +VH + A D SHP T +IYA + L+ Q
Sbjct: 648 AGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQ 707
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MK GY+P+TRFV+HD+D EGKE A+ HSE+LA+++GL+S+P PIRI KNLRVC DC
Sbjct: 708 MKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDC 767
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K ISKI RE+I RDA RFHHFK+G CSC DYW
Sbjct: 768 HTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 6/177 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T+ ++ ACG ALE+ K +H H+ S +RVST + KMY +C + DA VF
Sbjct: 232 TYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST--ALTKMYMKCGAFKDAREVFE 289
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
++ RD+ +W+TMI GF +G E+A F + + G+ PD + V SAC+ G +
Sbjct: 290 CLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLAR 349
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +KD G+V ++ ++++M G + +A + ++MP + DV W L+
Sbjct: 350 GKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 6/222 (2%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMY 455
+VL L ++ VD + +L+Q+C AK L K VHEH+ R V N +LK+Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
+ C S+++A +F + + + SW+ MI+G+A GL ++A ++F+ +Q L+PD F+
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 516 GVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ SACS+ + G +H M + G+ +++ M G + +A + M
Sbjct: 134 SILSACSSPAVLNWGREIHVRVM--EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA 191
Query: 575 MEPDVDVWEKLMNLCRM--HGNLELGDRCAEIVEQLDPSRLN 614
+V W L +G L A + E++ PSR+
Sbjct: 192 SRDEVS-WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRIT 232
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D F+ S S N + G G +EA + L++++ + D TF ++ AC
Sbjct: 87 DKFSNKSVVSWN----VMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
L + +H V + N ++ MY++C S+ DA VF M RD SW T+
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
+A++G GE+++ + Q ++P ++ V SAC +L + +G +H + +Y
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ ++ M G +A E E + DV W ++
Sbjct: 263 --SDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIR 304
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G V G+++EA + ++ ++ D T++ ++ AC L K +H + L
Sbjct: 303 IRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGL 362
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S +R N ++ MYS+ SM DA VF M +RD+ SW T++ +A ++ F
Sbjct: 363 VSDVRFG--NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
Q Q G+K + ++ V ACS + G +H E + G++ + +++ M
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA--GLLADLAVTNALMSMYF 478
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +++A+ E M M DV W L+
Sbjct: 479 KCGSVEDAIRVFEGMSMR-DVVTWNTLI 505
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 163/401 (40%), Positives = 257/401 (64%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ + A + ++++ + D TF+ L+ AC +AL E + +H +
Sbjct: 581 IAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL 640
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V G++ MY++C S+DDA VF N+ ++++ SW +MITG+A++G G++A+++F Q
Sbjct: 641 DCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQ 700
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q G+KPD F+G SAC+ G + EG+ HFESM KD+ I P M+HY +VD+ G G
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAG 759
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L EA+EFI KM ++PD +W L+ C++H ++EL ++ A+ +LDP+ N
Sbjct: 760 LLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSN 819
Query: 615 EKSKAGLVP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AG+ ++ ++ K Q+ +EV +VH + + D +HP+ ++I+A +
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGR 879
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK+ GY+P+TR+VLHD++ KE AL HSERLA+++GLL +P PI I KNLRV
Sbjct: 880 LHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRV 939
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A K+ISKI R++I RD+ RFHHFKDG+CSC D+W
Sbjct: 940 CGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A +V NN D S + GL + + K+A + ++E++ + D
Sbjct: 259 ALKVFNNLPRRDLITWTS----------MITGLARHRQFKQACNLFQVMEEEGVQPDKVA 308
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F L++AC +ALE+ K VH ++ + + +L MY++C SM+DA VF+ +
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ SW MI GFA++G E+A F++ ++G++P+ F+ + ACS + +G
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ + K G + + +++ M G L +A E++ + +V W ++
Sbjct: 429 IHDRIIKA-GYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ-NVVAWNAMIT 481
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V+ K A+ L K+ I D TF+ ++ C ALE K V + R
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG 538
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ M+ C + A ++F++M ERDL SW+T+I GF ++G + A D F
Sbjct: 539 FESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK 598
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+++G+KPD F G+ +AC++ + EG ++ + + + ++ M
Sbjct: 599 MMQESGVKPDQITFTGLLNACASPEALTEGR-RLHALITEAALDCDVVVGTGLISMYTKC 657
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D+A +P + +V W ++ HG
Sbjct: 658 GSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHG 689
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 115/224 (51%), Gaps = 5/224 (2%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
++F + + + N L +L K G++ EA+ VL ++ I + T+S L+Q C
Sbjct: 61 NEFVDIKNTQRANAFLNRLS---KAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKH 117
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
K L + + +H H++ + +N ++ MY++C + + A +F M ++D+ SW+ ++
Sbjct: 118 KNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLL 177
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G+ ++ E+A + Q Q G+KPD F+ + +AC+ +V +G F S+ + G
Sbjct: 178 GGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF-SLILNAGW 236
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ ++++M G +D+AL+ +P D+ W ++
Sbjct: 237 DTDLFVGTALINMHIKCGGVDDALKVFNNLP-RRDLITWTSMIT 279
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 6/215 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G+++EA + + I + TF ++ AC AL++ + +H+ + +
Sbjct: 378 MIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
++ RV T +L MY++C S+ DA +VF ++++++ +W+ MIT + ++ ++AV
Sbjct: 438 YITDDRVRT--ALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVAT 495
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+KPD F + + C + D +E +S+ G + ++V M
Sbjct: 496 FQALLKEGIKPDSSTFTSILNVCKS-PDALELGKWVQSLIIRAGFESDLHIRNALVSMFV 554
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ G L A+ MP E D+ W ++ HG
Sbjct: 555 NCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHG 588
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ + +EA + + + + D TF ++ AC DAK +++ + +
Sbjct: 177 LGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGW 236
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ M+ +C +DDA VF+N+ RDL +W +MITG A++ + A ++F
Sbjct: 237 DTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQV 296
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G++PD F+ + AC+ + +E + K+ G+ + +++ M G
Sbjct: 297 MEEEGVQPDKVAFVSLLKACNH-PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCG 355
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+++ALE + + +V W ++ HG +E
Sbjct: 356 SMEDALE-VFNLVKGRNVVSWTAMIAGFAQHGRME 389
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 241/401 (60%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ + +++ S + TFS + C D ALE K VH V +
Sbjct: 363 ISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGF 422
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S D+A VF + E+D+ SW+TMI G+A++G G A+ +F
Sbjct: 423 ETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFES 482
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K+AG+KPD+ +GV SACS G + G +F SM +DY + P+ KHY ++D+LG G
Sbjct: 483 MKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAG 542
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L+EA + MP +P W L+ R+HGN ELG++ AE+V +++P S
Sbjct: 543 RLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSN 602
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L S + +E +K+ + +EV++K+H + GD HPE D+IYA +
Sbjct: 603 LYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEE 662
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+ GY+ T+ VLHD+++E KE L HSE+LAV+ G+L+ PA PIR+MKNLRV
Sbjct: 663 LDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRV 722
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K ISKIVGR +I+RD+ RFHHF +G+CSC DYW
Sbjct: 723 CQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R +S++N ++ Y + + A +F M +RD SW +I+G+A+NG E+A+++F
Sbjct: 321 PCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFV 380
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ K+ G + F S C+ + + G +H + + + + + +++ M
Sbjct: 381 EMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGN--ALLGMYFK 438
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G DEA + E + E DV W ++ HG
Sbjct: 439 CGSTDEANDVFEGIE-EKDVVSWNTMIAGYARHG 471
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 21/156 (13%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y + +A +F M ++D+ SW+ M++G+A+NG ++A ++F++
Sbjct: 110 SWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR- 168
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS---MKHYVSIVDMLGSTGYL 563
+ + G+ +A G + E FES S ++ ++ M YV +MLG
Sbjct: 169 ---NSISWNGLLAAYVHNGRLKEARRLFESQS-NWELISWNCLMGGYVK-RNMLG----- 218
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+A + ++MP+ DV W +++ G ++GD
Sbjct: 219 -DARQLFDRMPVR-DVISWNTMIS-----GYAQVGD 247
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+YN +L Y + M A +F M R+++SW+TMITG+ +NG A +F Q
Sbjct: 296 SYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQR- 354
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
D + + S + G E + F M +D
Sbjct: 355 ---DCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G + G V EA EV + + + +++ L+ A L+EA+ + E
Sbjct: 145 MLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFES----Q 196
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S + ++N ++ Y + + + DA +F M RD+ SW+TMI+G+A+ G A +F+
Sbjct: 197 SNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN 256
Query: 501 Q 501
+
Sbjct: 257 E 257
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 16/162 (9%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ T+N + + D A VF++M R S++ MI+G+ +N A D+F + +
Sbjct: 46 IVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPE 105
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML---GSTG 561
L + + G + LG+ K + ++P K VS ML G
Sbjct: 106 RDLFSWNVMLTG-YVRNRRLGEA----------HKLFDLMPK-KDVVSWNAMLSGYAQNG 153
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
++DEA E KMP + W L+ +G L+ R E
Sbjct: 154 FVDEAREVFNKMPHRNSIS-WNGLLAAYVHNGRLKEARRLFE 194
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL +++ ++ + L EA + + L+ V ++N +L Y++ +D+A VF
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFD----LMPKKDVVSWNAMLSGYAQNGFVDEAREVF 162
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV- 527
+ M R+ SW+ ++ + NG ++A +F L + +G + + LGD
Sbjct: 163 NKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWN-CLMGGYVKRNMLGDAR 221
Query: 528 -------VEGMLHFESMSKDYGIVPSMKH---------------YVSIVDMLGSTGYLDE 565
V ++ + +M Y V + + ++V G +DE
Sbjct: 222 QLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDE 281
Query: 566 ALEFIEKMPMEPDV 579
A ++ ++MP++ ++
Sbjct: 282 ARKYFDEMPVKNEI 295
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 272/467 (58%), Gaps = 32/467 (6%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMMASQ--VLNNCKHEDDFAEASRSSQNNGTL 379
DQ+R ++ P N + + +G QNG +A + D + A+
Sbjct: 314 DQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA--------- 364
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G +EA+ + +++ ++ TF+ + C + ALE K VH V +
Sbjct: 365 -IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK- 422
Query: 440 LSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ L Y N +L MY +C ++DDA+ VF + E+++ SW+TMI G+A++G G++A+
Sbjct: 423 -AGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 481
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F K+ G+ PDD +GV SACS G V +G +F SM++DYGI + KHY ++D+L
Sbjct: 482 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 541
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G G LD+A ++ MP EPD W L+ R+HGN ELG++ A+++ +++P N
Sbjct: 542 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD--NSGM 599
Query: 618 KAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
L + A+ +++ KK+ + +EV++K+H + GD+ HPE D+I
Sbjct: 600 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI 659
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
Y + L +MK+ GY+ T+ VLHD+++E K L HSE+LAV+ G+L+ PA PIR+
Sbjct: 660 YTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRV 719
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVC DCH+A+K ISKIVGR +I+RD+ RFHHF G CSC DYW
Sbjct: 720 IKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G + EA V G+ EK +S ++ ++ K +++A+ + E +
Sbjct: 273 VSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAM---- 323
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P + VS++N ++ Y++ + A + F M +RD SW +I G+A++G GE+A+ +F
Sbjct: 324 -PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 382
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALG 525
+ K+ G + + F S C+ +
Sbjct: 383 VEMKRDGERLNRSTFTSTLSTCAEIA 408
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 382 LDGLVKEGKVKEAIEVLGLLE-KQCISVD--LPTFSQLMQACGDAKALEEAKAVHEHVER 438
L G + G VKEA E+ + K IS + L + Q + DA+ L E+KA E +
Sbjct: 149 LSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR-IEDARRLFESKADWELI-- 205
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
++N ++ Y + + + DA +F M ERD SW+TMI+G+A+NG +A +
Sbjct: 206 --------SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL 257
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH-----FESMSKDYGIVPSMKHYVSI 553
F + P +F ++A + G V GML F+ M + + + +I
Sbjct: 258 FEE------SPVRDVF--TWTAMVS-GYVQNGMLDEARRVFDGMPEKNSV-----SWNAI 303
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ +D+A E E MP + +V W ++
Sbjct: 304 IAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMIT 336
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+F M ERD+ SW+ M++G+A+NG ++A +IF +
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 168
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 246/402 (61%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +EA+ +++ C ++ +F+ + C + ALE + +H + +
Sbjct: 151 MIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAG 210
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N +L MY +C S+D+A F + E+D+ SW+TMI G+A++G GE+A+ +F
Sbjct: 211 YQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFE 270
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K G++PDD + V +ACS G V +G +F SM++DYGI + HY +VD+LG
Sbjct: 271 LMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRA 330
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LN 614
G L+EA ++ MP EPD W L+ R+HGN ELG++ A+I+ +++P L+
Sbjct: 331 GQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLS 390
Query: 615 EKSKAGLVPVNASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ A +A ++ E NK K+ + LEV++K+H ++ GDTSHP TDKIY +
Sbjct: 391 KLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLE 450
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K+ GYI T V HD+++E K L HSE+LAV++G+L PA PIR++KNLR
Sbjct: 451 EMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLR 510
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A+K ISKIVGR +I+RD RFH+F+ G CSCRD+W
Sbjct: 511 VCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F NM +RD SW MI G+++NG E+A+ F + ++ + + F S CS +
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ G LH + Y YV +++ M G +DEA + +++ +E DV W
Sbjct: 196 LELGRQLHCRLVKAGY----QTGWYVGNALLAMYCKCGSIDEARDAFQEI-LEKDVVSWN 250
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
+++ HG G+ + E + + + A +V V A+
Sbjct: 251 TMIHGYARHG---FGEEALTVFELMKTTGI-RPDDATMVSVLAA 290
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
++N +L Y + A ++F M ERD+ SW+ M++G+A+NG ++A +IF
Sbjct: 28 SWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIF 80
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 245/391 (62%), Gaps = 9/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ L+++ + D T+ ++ AC ++ +LE AK +H V + S N +
Sbjct: 630 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNAL 689
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C S DA VF M +R++ SW+ +I G A++G G+D + +F + K G+KPD
Sbjct: 690 VSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDI 749
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ + SACS G + EG +F SMS+D+GI P+++HY +VD+LG G LDE I+
Sbjct: 750 VTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIK 809
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNEKSKAGLVPVN 625
MP + + +W L+ CR+HGN+ + +R AE +LDP L+ A + +
Sbjct: 810 TMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDS 869
Query: 626 ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A++L K E + + + + +EV K+H + A D SHPE++KIYA + L MK GY
Sbjct: 870 AAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGY 929
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+TR V+HD+D+ KE A+ HSERLA+++GL+S+ PIRI KNLRVC DCH+A K
Sbjct: 930 VPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKF 989
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KIV RE++ RD RFHHFKDG+CSC DYW
Sbjct: 990 ITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 14/251 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL K G EA+ V +++ + + T++ ++ AC AL+ + +H+ V
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C S+ DA VF MT+RD+ +++ MI G+A + LG++A+ +F +
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GLKPD +I + +AC+ G +E S+ G + ++V G
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGS-LEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCG 697
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDP------S 611
+AL +KM M+ +V W ++ C HG L+L +R +E + P S
Sbjct: 698 SFSDALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERMK--MEGIKPDIVTFVS 754
Query: 612 RLNEKSKAGLV 622
L+ S AGL+
Sbjct: 755 LLSACSHAGLL 765
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 121/238 (50%), Gaps = 10/238 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G +EA E+ ++++ + + T+ L+ AC + AL + +H V +
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGF 477
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ MY+ C S+ DA +F+ M +D+ SW MI G AK+GLG +A+ +F
Sbjct: 478 MFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+QAGLKP+ + + +ACS+ + G +H + + + G+ ++V+M
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI--EAGLATDAHVANTLVNMYSMC 595
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG----NLELGDRCAEIVEQLDPSRLN 614
G + +A + ++M + D+ + ++ H L+L DR E E L P ++
Sbjct: 596 GSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE--EGLKPDKVT 650
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 13/274 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A QV N H E + S N + G V+ G ++EA+++L +++ +++ T
Sbjct: 195 ARQVWNKLNH----TERTVHSWNAMVV----GYVQYGYIEEALKLLREMQQHGLALGRAT 246
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+L+ +C ALE + +H + V+ N IL MY++C S+ +A VF M
Sbjct: 247 TMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKME 306
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+ + SW +I G+A G E A +IF + +Q G+ P+ +I V +A S + G
Sbjct: 307 TKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKT 366
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
S + G + ++V M G + + EK+ + D+ W ++
Sbjct: 367 -VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEG 424
Query: 593 GNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
GN E +EI Q+ + ++ +NA
Sbjct: 425 GNWE---EASEIYHQMQREGMMPNKITYVILLNA 455
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A++V+ L++Q V+ + ++++ C + K L + VHEH+ + + L T N ++
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 454 MYSECDSMDDAFSVFS--NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
MY +C S+++A V++ N TER + SW+ M+ G+ + G E+A+ + + +Q GL
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + S+C + + G +H E+M ++ + I++M G + EA E
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEAREVF 302
Query: 571 EKMPMEPDVDVWEKLM 586
+KM + V W ++
Sbjct: 303 DKMETKSVVS-WTIII 317
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G + A E+ ++++ + + T+ ++ A AL+ K VH H+
Sbjct: 317 IGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGH 376
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ ++KMY++C S D VF + RDL +W+TMI G A+ G E+A +I+ Q
Sbjct: 377 ESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQ 436
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G+ P+ ++ + +AC + G + KD G + + +++ M G
Sbjct: 437 MQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD-GFMFDISVQNALISMYARCG 495
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
+ +A KM + D+ W ++
Sbjct: 496 SIKDARLLFNKM-VRKDIISWTAMI 519
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 272/467 (58%), Gaps = 32/467 (6%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMMASQ--VLNNCKHEDDFAEASRSSQNNGTL 379
DQ+R ++ P N + + +G QNG +A + D + A+
Sbjct: 233 DQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA--------- 283
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G +EA+ + +++ ++ TF+ + C + ALE K VH V +
Sbjct: 284 -IIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK- 341
Query: 440 LSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ L Y N +L MY +C ++DDA+ VF + E+++ SW+TMI G+A++G G++A+
Sbjct: 342 -AGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 400
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F K+ G+ PDD +GV SACS G V +G +F SM++DYGI + KHY ++D+L
Sbjct: 401 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 460
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G G LD+A ++ MP EPD W L+ R+HGN ELG++ A+++ +++P N
Sbjct: 461 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPD--NSGM 518
Query: 618 KAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
L + A+ +++ KK+ + +EV++K+H + GD+ HPE D+I
Sbjct: 519 YVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRI 578
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
Y + L +MK+ GY+ T+ VLHD+++E K L HSE+LAV+ G+L+ PA PIR+
Sbjct: 579 YTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRV 638
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVC DCH+A+K ISKIVGR +I+RD+ RFHHF G CSC DYW
Sbjct: 639 IKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G + EA V G+ EK +S ++ ++ K +++A+ + E +
Sbjct: 192 VSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAM---- 242
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P + VS++N ++ Y++ + A + F M +RD SW +I G+A++G GE+A+ +F
Sbjct: 243 -PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 301
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALG 525
+ K+ G + + F S C+ +
Sbjct: 302 VEMKRDGERLNRSTFTSTLSTCAEIA 327
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 382 LDGLVKEGKVKEAIEVLGLLE-KQCISVD--LPTFSQLMQACGDAKALEEAKAVHEHVER 438
L G + G VKEA E+ + K IS + L + Q + DA+ L E+KA E +
Sbjct: 68 LSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGR-IEDARRLFESKADWELI-- 124
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
++N ++ Y + + + DA +F M ERD SW+TMI+G+A+NG +A +
Sbjct: 125 --------SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL 176
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH-----FESMSKDYGIVPSMKHYVSI 553
F + P +F ++A + G V GML F+ M + + + +I
Sbjct: 177 FEE------SPVRDVF--TWTAMVS-GYVQNGMLDEARRVFDGMPEKNSV-----SWNAI 222
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ +D+A E E MP + +V W ++
Sbjct: 223 IAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMIT 255
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+F M ERD+ SW+ M++G+A+NG ++A +IF +
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 87
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 241/391 (61%), Gaps = 9/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA E+ +E V+ TF+ L+ A+ + + +H + + + N +
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNAL 392
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MYS C +++ AF VF+ M + ++ SW +MITGFAK+G A++ F + +AG+ P++
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+I V SACS +G + EG+ HF+SM ++GIVP M+HY +VD+LG +G+L+EA+E +
Sbjct: 453 VTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVN 512
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLV 622
MP + D V + CR+HGN++LG AE++ + DP S L+ +
Sbjct: 513 SMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEE 572
Query: 623 PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+ KE+ K A + +EV +KVH++ GDTSHP+ +IY + L ++KE GY
Sbjct: 573 VAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGY 632
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
IP T FVLHD+++E KE+ L HSE++AV++G +S+ PIR+ KNLRVCGDCH+A K
Sbjct: 633 IPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKY 692
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S + +E+++RDA RFHHFKDG CSC DYW
Sbjct: 693 FSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++ A+ VF M +R++ +W MIT F + G DAVD+F +G PD GV SA
Sbjct: 95 LESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSA 154
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGYLDEALEFIEKMPMEP 577
C+ +G + G F + G+ + S+VDM + G +D+A + ++MP+
Sbjct: 155 CAEMGLLSLGR-QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH- 212
Query: 578 DVDVWEKLMN 587
+V W ++
Sbjct: 213 NVMSWTAIIT 222
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC---DSMDDAF 465
D T S ++ AC + L + H V + L V ++ MY++C S+DDA
Sbjct: 144 DRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDAR 203
Query: 466 SVFSNMTERDLTSWDTMITGFAKN-GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
VF M ++ SW +ITG+ ++ G +A+++F + Q +KP+ F V AC+ L
Sbjct: 204 KVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANL 263
Query: 525 GDVVEGMLHFESMSKDYGIVPSMK 548
D+ G + Y +V M+
Sbjct: 264 SDIWLG-------EQVYALVVKMR 280
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 382 LDGLVKEGKV-KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G +EAIE+ + + + + TFS +++AC + + + E V L+
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDI----WLGEQVYALV 276
Query: 441 SPLRVSTYNGI----LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
+R+++ N + + MYS C +M++A F + E++L S++T++ +AK+ E+A
Sbjct: 277 VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAF 336
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++F++ + AG + F + S S++G + +G S G ++ +++ M
Sbjct: 337 ELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGE-QIHSRILKSGFKSNLHICNALISM 395
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + +M + +V W ++ HG
Sbjct: 396 YSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKHG 431
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 20/125 (16%)
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGDV 527
+RDL SW +I+ +A N +A+ F + G P++ F GVF ACS +LG +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 528 VEGML----HFESMSKDYGIVPSMKHYVSIVDM-LGSTGYLDEALEFIEKMPMEPDVDVW 582
+ G L +FES D + +++DM + G L+ A + ++MP + +V W
Sbjct: 64 IFGFLLKTGYFES---DVCV------GCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTW 113
Query: 583 EKLMN 587
++
Sbjct: 114 TLMIT 118
>gi|38347147|emb|CAD39490.2| OSJNBa0039G19.7 [Oryza sativa Japonica Group]
Length = 557
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 240/355 (67%), Gaps = 30/355 (8%)
Query: 422 DAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
+ K LEE + +H+ R SP R + N +L+MY++C +M+ A F +M +R++ SW
Sbjct: 230 NPKLLEELRKIHDFFLR--SPFRADLQVNNKMLEMYAKCAAMNHARRTFDHMPDRNMDSW 287
Query: 480 DTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
MI G+A NGLG+ A+ +F + K + G+ P F V +AC+ + E L+F++MS
Sbjct: 288 HIMIDGYAVNGLGDVALQLFEEMKTKYGIAPTAHTFTLVLNACANSEAIEEAFLYFDAMS 347
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
+D+GI P ++HYV I+++LG +G+L+EA+E+IEK+P EP VWE L+NL RM+G+++L
Sbjct: 348 RDHGIEPGVEHYVGIIEVLGKSGHLNEAVEYIEKLPFEPTDTVWESLLNLARMNGDIDLE 407
Query: 599 DRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDT 658
DR E++ LDP++ VN +L ++L N+L+ R+K+ EYR
Sbjct: 408 DRAEELLVSLDPTK-----------VNPKKLPTPPPKRRLGI-NMLDGRNKLVEYRLP-- 453
Query: 659 SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS 718
P+ +K + E Y+P+TR+VLHDIDQE KE+ALL HSERLA+++GL+S+
Sbjct: 454 --PKIEK---------KVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIST 502
Query: 719 PARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PAR P+RI+KNLR+CGDCH+A+KI+S+IVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 503 PARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 557
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 244/401 (60%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+ + ++ Q I D ++ AC ALE+ K +H + R
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V G++ +Y++C +++ A +F M E+D+ SW TMI + +G GEDA+ +FS+
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSK 514
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G K D F + +ACS G V +G+ +F+ M DYG+ P ++HY +VD+LG G
Sbjct: 515 MQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAG 574
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+LDEA I+ M +EPD +VW L+ CR+H N+ELG++ A+ + +LDP S
Sbjct: 575 HLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSN 634
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +++ ++ KEK KK +++ V V + GD +HP++++IYA++
Sbjct: 635 IYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEI 694
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L QM++AGY+P T L D+++E KE L +HSE+LA+S G++++ PIRIMKNLRV
Sbjct: 695 LYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRV 754
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A K ISKIVGRE+I+RDA RFHH K+G CSC DYW
Sbjct: 755 CSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 8/242 (3%)
Query: 348 QNGMMASQVLNNCKHEDDFAEASRSSQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQC 405
+N + ++ ++ C ++ F + +NN + E + G VK G +A+ + +++
Sbjct: 58 RNKVKTTREVSACANQTQFTQTD--IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG 115
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I+ D F +++ACG L+ + VHE + V + MY++C S+++A
Sbjct: 116 INPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENAR 175
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M +RD+ SW+ +I G+++NG +A+ +FS+ + G+KP+ + V C+ L
Sbjct: 176 QVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLL 235
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ +G +H ++ GI + +V+M G ++ A + E+MP+ DV W
Sbjct: 236 ALEQGKQIHCYAIRS--GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR-DVASWNA 292
Query: 585 LM 586
++
Sbjct: 293 II 294
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 10/217 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA+ + ++ I + T +M C ALE+ K +H + R
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V NG++ MY++C +++ A +F M RD+ SW+ +I G++ N +A+ F++
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNR 312
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY---GIVPSMKHYVSIVDML 557
+ G+KP+ + V AC+ L + +G +H ++ + +V + ++V+M
Sbjct: 313 MQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN-----ALVNMY 367
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G ++ A + E+MP + +V W +++ HG+
Sbjct: 368 AKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGH 403
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 115/238 (48%), Gaps = 10/238 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ ++ + I + T ++ AC ALE+ + +H + R N ++
Sbjct: 305 EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALV 364
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C +++ A+ +F M ++++ +W+ +I+G++++G +A+ +F + + G+KPD
Sbjct: 365 NMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSF 424
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ V AC+ + +G + G ++ +VD+ G ++ A + E+
Sbjct: 425 AIVSVLPACAHFLALEQGK-QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 573 MPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLD----PSRLNEKSKAGLV 622
MP E DV W ++ +HG+ L L + E +LD + L S AGLV
Sbjct: 484 MP-EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLV 540
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 247/398 (62%), Gaps = 13/398 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G EA+ + ++++ ++++ P+ ++ C +L+ + VH + R +
Sbjct: 312 RKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLY 371
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ ++ MY +C + A +F+ +D+ W++MITG++++GLGE+A+++F +G
Sbjct: 372 VASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG 431
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++PD+ FIGV SACS G V EG FE+M Y + P ++HY +VD+LG G +DEA
Sbjct: 432 VQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEA 491
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+E +EKMPMEPD VW L+ CR H L+L + E + +L+P N L + A
Sbjct: 492 MELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPK--NAGPYVLLSHMYA 549
Query: 627 S-------ELAKEKENK---KLASQNLLEVRSKVHEYRAGDT-SHPETDKIYALIRGLRA 675
+ E+ ++K N+ K + +EV KVH + GD+ SHPE I ++ L
Sbjct: 550 TKGRWRDVEVLRKKINRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSG 609
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++EAGY P+ FVLHD+D+E K +L HSERLAV++GLL P PIR+MKNLRVCGD
Sbjct: 610 FLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGD 669
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHSA+K+I+K+ GRE+I+RDA RFHHFKDG CSC+D+W
Sbjct: 670 CHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y + + DA VF M ER++ SW +M+ G+ + G+ E+A +F + +
Sbjct: 85 SFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRN 144
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS---TGYL 563
+ + IG S + D K + ++P K V + +M+G G L
Sbjct: 145 V-VSWTVMIGGLLKESRIDDA----------KKLFDMIPE-KDVVVVTNMIGGYCQVGRL 192
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
DEA E ++M + +V W +++ +G +++ + E++ P R NE S ++
Sbjct: 193 DEARELFDEMKVR-NVFTWTTMVSGYAKNGRVDVARKLFEVM----PER-NEVSWTAML 245
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ N ++ + M A +F M ERD +W+ MI F + GL +A+ +F++ ++
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ + I V S C++L + G
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHG 354
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQ 404
G +Q GM+ E F E R + + T+ + GL+KE ++ +A ++ ++ ++
Sbjct: 123 GYVQEGMVEEA-------EKLFWEMPRRNVVSWTV-MIGGLLKESRIDDAKKLFDMIPEK 174
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
D+ + ++ L+EA+ + + + V T+ ++ Y++ +D A
Sbjct: 175 ----DVVVVTNMIGGYCQVGRLDEARELFDE----MKVRNVFTWTTMVSGYAKNGRVDVA 226
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+F M ER+ SW M+ G+ ++G ++A ++F
Sbjct: 227 RKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELF 261
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/440 (39%), Positives = 257/440 (58%), Gaps = 16/440 (3%)
Query: 350 GMMAS---QVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLE 402
G MAS V N C F + N +L + ++ EA+++ +E
Sbjct: 1228 GTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 1287
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
+ D + + ++ ACGD AL + +HE+V R + N ++ MY++C ++
Sbjct: 1288 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 1347
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A VF M RD+ SW +MI+ + NG G DAV +FS+ + GL PD F+ V SACS
Sbjct: 1348 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 1407
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
G + EG +F+ M+++ IVP ++H+V +VD+LG G +DEA FI++MPMEP+ VW
Sbjct: 1408 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 1467
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVP--VNASELAKEK 633
L++ CR++ N+ +G A+ + QL P + N +KAG + K K
Sbjct: 1468 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 1527
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
KK+ + E+ ++VH + AGD SHP++ +IY + L +MKEAGY+PET LHD+
Sbjct: 1528 GIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDV 1587
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
++E KE L HSE+LA++ +L++ +PIRI KNLRVCGDCH A K+ISKIVGRE+ I
Sbjct: 1588 EEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITI 1647
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD RFHHF +G+CSC DYW
Sbjct: 1648 RDTNRFHHFYNGVCSCGDYW 1667
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 14/220 (6%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D T+ +++A ++ L +H V R+ L V NG++ MY +C + +A
Sbjct: 1122 IDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEAC 1181
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
V M RD+ SW++++ G A+NG +DA+++ + + GLKPD + S L
Sbjct: 1182 RVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPD------AGTMASLLP 1235
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVS---IVDMLGSTGYLDEALEFIEKM---PMEPDV 579
V L S K+ + + K VS ++ + + EA++ +M ++PD
Sbjct: 1236 AVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDA 1295
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKS 617
++ C L LG R E V ++L P+ L E +
Sbjct: 1296 ISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 1335
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ Y+ C +F + ++++ ++ MI + N L DA+ +F G+ PD
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ V A S D+ GM + G+ ++ ++ M G G L EA +
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGM-QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 1184
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLVPV---- 624
++MP DV W L+ C +G D E+ ++++ L + + A L+P
Sbjct: 1185 DZMPCR-DVVSWNSLVAGCARNGQF---DDALEVCKEMELLGLKPDAGTMASLLPAVTNT 1240
Query: 625 ---NAS---ELAKEKENKKLASQNLL 644
N S E+ + NK L S N++
Sbjct: 1241 CLDNVSFVKEMFMKLANKSLVSWNVM 1266
>gi|297836184|ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
Length = 548
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 247/401 (61%), Gaps = 34/401 (8%)
Query: 378 TLEQLDGLVKEGKVKEAIEVL---GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE 434
++E++ L + K+AIE+L + +++C F L ++C + K+LE +K VH+
Sbjct: 177 SVEEVMSLCQRRLYKDAIELLDKGAMPDREC-------FVLLFESCANLKSLEHSKKVHD 229
Query: 435 HVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H L S R N ++ M+ EC S+ DA VF +M ++D+ SW M+ ++ NG+G
Sbjct: 230 HF--LQSKFRGDPKLNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMG 287
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+DA+ +F + + GLKP+++ F+ VF AC+ +G + E LHF+SM ++GI P +HY+
Sbjct: 288 DDALHLFEEMTKQGLKPNEETFLTVFLACATVGGIKEAFLHFDSMRNEHGISPKTEHYLG 347
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
++ +LG G+L EA ++I +P EP D WE + N R+HG+++L D E++ LD S
Sbjct: 348 VLGVLGKCGHLIEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDLDSS- 406
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
K+ +P + K N++ +S++ E+R E ++
Sbjct: 407 ---KAVTNKIPT--------PQPKSFKETNMVTSKSRILEFRNLTFYKDEAKEM------ 449
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
A K Y+P+TRFVLHDIDQE KE+ALL HSERLA+++G++ +P R + I+KNLRV
Sbjct: 450 --AAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRV 507
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +KI+SKI+GRELI+RD KRFHHFKDG CSC DYW
Sbjct: 508 CGDCHNFIKIMSKIIGRELIVRDNKRFHHFKDGKCSCGDYW 548
>gi|18397896|ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15690
gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|20197709|gb|AAD17413.2| Expressed protein [Arabidopsis thaliana]
gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|330251336|gb|AEC06430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 579
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 248/401 (61%), Gaps = 34/401 (8%)
Query: 378 TLEQLDGLVKEGKVKEAIEVL---GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE 434
++E++ L + K+AIE+L + +++C F L ++C + K+LE +K VH+
Sbjct: 208 SVEEVMRLCQRRLYKDAIELLDKGAMPDREC-------FVLLFESCANLKSLEHSKKVHD 260
Query: 435 HVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H L S R N ++ M+ EC S+ DA VF +M ++D+ SW M+ ++ NG+G
Sbjct: 261 HF--LQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMG 318
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+DA+ +F + + GLKP+++ F+ VF AC+ +G + E LHF+SM ++GI P +HY+
Sbjct: 319 DDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG 378
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
++ +LG G+L EA ++I +P EP D WE + N R+HG+++L D E++ +DPS
Sbjct: 379 VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPS- 437
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
K+ +P + KE N++ +S++ E+R E ++
Sbjct: 438 ---KAVINKIPTPPPKSFKET--------NMVTSKSRILEFRNLTFYKDEAKEM------ 480
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
A K Y+P+TRFVLHDIDQE KE+ALL HSERLA+++G++ +P R + I+KNLRV
Sbjct: 481 --AAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRV 538
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +KI+SKI+GR LI+RD KRFHHFKDG CSC DYW
Sbjct: 539 CGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>gi|357501047|ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 246/388 (63%), Gaps = 35/388 (9%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
++EG V + +E++G Q D F L++ C D K+LE K VHE + R
Sbjct: 78 FLQEGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ +Y +C S+ DA VF M +R++ S + MI G+ NGLG D + +F Q +Q
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQ 193
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PD++ F V + C+ + V EG++ FESM K+YGIVP M+HY+ +V++ G G LD
Sbjct: 194 QGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGCAGPLD 252
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA EFIE MP+E VDVWE L N R++G+LE DR A+++ DPS K+ A +P+
Sbjct: 253 EAQEFIENMPIEAGVDVWETLRNFARIYGDLEREDR-AKLLTVRDPS----KAAADKMPL 307
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+ KK ++ N+LE +++V EYR L Q++EAGY+P
Sbjct: 308 --------PQRKKQSAINMLEEKNRVSEYRC-----------------LTGQIREAGYVP 342
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+K +S
Sbjct: 343 DTRYVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMS 402
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDY 772
KIVG +LI+RD KRFHHFKDG C+ Y
Sbjct: 403 KIVGMKLIVRDNKRFHHFKDGKCAISMY 430
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 249/412 (60%), Gaps = 13/412 (3%)
Query: 374 QNNGTLEQLDGLV-KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
++NGT + + ++G EA+ + ++++ ++++ P+ ++ C +L+ K V
Sbjct: 301 RDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQV 360
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H + R + + ++ MY +C ++ A VF+ +D+ W++MITG++++GLG
Sbjct: 361 HAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLG 420
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
E+A+++F +G+ PDD FIGV SACS G V EG+ FE+M Y + P ++HY
Sbjct: 421 EEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYAC 480
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
+VD+LG ++EA++ +EKMPMEPD VW L+ CR H L+L + E + QL+P
Sbjct: 481 LVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKN 540
Query: 613 LNE----------KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTS-HP 661
K + V V E K + KL + +EV KVH + GD+ HP
Sbjct: 541 AGPYVLLSNMYAYKGRWRDVEV-LREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHP 599
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
E I ++ L ++EAGY P+ FVLHD+D+E K +L HSE+LAV++GLL P
Sbjct: 600 EQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEG 659
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIR+MKNLRVCGDCHSA+K+I+K+ GRE+I+RDA RFHHFKDG CSC+DYW
Sbjct: 660 MPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D A VF M ERD +W MI + + G +A+ +F + ++ GL + I V S
Sbjct: 288 VDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSV 347
Query: 521 CSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEP 577
C +L + G +H + + ++ YV+ ++ M G L A + + P++
Sbjct: 348 CVSLASLDHGKQVHAQLVRSEF----DQDLYVASVLITMYVKCGNLVRAKQVFNRFPLK- 402
Query: 578 DVDVWEKLMNLCRMHG 593
DV +W ++ HG
Sbjct: 403 DVVMWNSMITGYSQHG 418
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS++N ++ Y E +A +F M +R+ SW+ +I+G KNG+ +A +F
Sbjct: 55 VSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTM-- 112
Query: 505 AGLKPDDQI--FIGVFSACSALGDVVEGMLHFESMS------------------------ 538
PD + + + GDV E F M
Sbjct: 113 ----PDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDAR 168
Query: 539 KDYGIVPSMKHYVSIVDMLG---STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
K + ++P K V++ +M+G G LDEA ++MP + +V W +++ +G +
Sbjct: 169 KLFDMMPE-KDVVAVTNMIGGYCEEGRLDEARALFDEMP-KRNVVTWTAMVSGYARNGKV 226
Query: 596 ELGDRCAEIVEQ 607
++ + E++ +
Sbjct: 227 DVARKLFEVMPE 238
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 33/197 (16%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEAS--RSSQNNGTLEQ------------------ 381
SG+I+NGM+ A +V + + + S R NG + +
Sbjct: 94 SGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTV 153
Query: 382 -LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L GL++EG+V +A ++ ++ ++ D+ + ++ + L+EA+A+ + +
Sbjct: 154 MLGGLLQEGRVDDARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDEARALFDEM---- 205
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V T+ ++ Y+ +D A +F M ER+ SW M+ G+ +G +A +F
Sbjct: 206 -PKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLF 264
Query: 500 SQFKQAGLKPDDQIFIG 516
+ +++ +G
Sbjct: 265 DAMPVKPVVVCNEMIMG 281
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 211/312 (67%), Gaps = 9/312 (2%)
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M+ +++ SW+ MI G+ +G GEDA+ +F+Q +Q G+KP++ FI V SACS G V EG
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ M+ DY I P+++HY +VD+LG G+L+EA +FIEKMP+EP VW + CR
Sbjct: 61 WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCR 120
Query: 591 MHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLASQ 641
+H N+ELG+R AE++ LDP N + AG ++ KEK+ KK
Sbjct: 121 IHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGC 180
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+L+EV +K+H + GD SHP+T+ IYA++ L QM+ GY+P T FVLHD+++E KE
Sbjct: 181 SLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENM 240
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L AHSE+LA++ GL+S+ + IRI KNLRVCGDCHSA K ISKIV RE+I+RD RFHH
Sbjct: 241 LFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHH 300
Query: 762 FKDGLCSCRDYW 773
FKDGLCSC DYW
Sbjct: 301 FKDGLCSCGDYW 312
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 243/403 (60%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+ + L+E++ ++ +FS + C D ALE K +H + +
Sbjct: 376 IAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 435
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+++A +F M +D+ SW+TMI G++++G GE+A+ F
Sbjct: 436 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFES 495
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K+ GLKPDD + V SACS G V +G +F +M++DYG+ P+ +HY +VD+LG G
Sbjct: 496 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAG 555
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA ++ MP EPD +W L+ R+HGN EL + A+ + ++P N L
Sbjct: 556 LLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE--NSGMYVLL 613
Query: 622 VPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS ++K KK+ + +E+++K H + GD HPE D+I+A +
Sbjct: 614 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 673
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +MK+AGY+ +T VLHD+++E KE + HSERLAV++G++ + PIR++KNL
Sbjct: 674 EDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNL 733
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A+K ++K+ GR +I+RD RFHHFKDG CSC DYW
Sbjct: 734 RVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSV 467
DL +++ +++ + L +A+ + E + P R V ++N IL Y++ +DDA V
Sbjct: 120 DLVSWNVMIKGYVRNRNLGKARELFERM-----PERDVCSWNTILSGYAQNGCVDDARRV 174
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M E++ SW+ +++ + +N E+A +F + L + + G +
Sbjct: 175 FDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKK----KKI 230
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
VE F+SM V + + +I+ G +DEA + ++ P+ DV W +++
Sbjct: 231 VEARQFFDSMK-----VRDVVSWNTIITGYAQNGEIDEARQLFDESPVH-DVFTWTAMVS 284
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ--- 381
D +RR + + P + ++ + S + N K E+ A S+ N L
Sbjct: 169 DDARRVFDRMPEKN-------DVSWNALLSAYVQNSKLEE--ACVLFGSRENWALVSWNC 219
Query: 382 -LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G VK+ K+ EA + ++ + D+ +++ ++ ++EA+ + +
Sbjct: 220 LLGGFVKKKKIVEARQFFDSMKVR----DVVSWNTIITGYAQNGEIDEARQLFDE----- 270
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
SP+ V T+ ++ Y + +++A +F M ER+ SW+ M+ G+ + E A ++F
Sbjct: 271 SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF 330
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + + G ++ C G + E F+ M K + + +++
Sbjct: 331 DVMPCRNVSTWNTMITG-YAQC---GKISEAKNLFDKMPKRDPV-----SWAAMIAGYSQ 381
Query: 560 TGYLDEALEFIEKMPME 576
+G+ EAL M E
Sbjct: 382 SGHSYEALRLFVLMERE 398
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 246/391 (62%), Gaps = 9/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ L+++ + D T+ ++ AC ++ +LE A+ +H V + S N +
Sbjct: 512 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNAL 571
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C S DA VF MT+R++ SW+ +I G A++G G+DA+ +F + K G+KPD
Sbjct: 572 VSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDI 631
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ + SACS G + EG +F SMS+D+ I+P+++HY +VD+LG G LDEA I+
Sbjct: 632 VTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIK 691
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVN 625
MP + + +W L+ CR+HGN+ + +R AE +LD L+ A + +
Sbjct: 692 TMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDS 751
Query: 626 ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A++L K E + + + + ++V K+H + A D SHP+++KIYA + L MK GY
Sbjct: 752 AAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGY 811
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+TR V+HD+D+ KE A+ HSERLA+++GL+S+P I I KNLRVC DCH+A K
Sbjct: 812 VPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKF 871
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKIV RE+I RD RFHHFKDG+CSC DYW
Sbjct: 872 ISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 49/260 (18%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL K G EA+ V +++ + + T++ ++ AC ALE + +H+ V
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS C S+ DA VF M +RD+ +++ MI G+A + LG++A+ +F +
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 502 FKQAGLKPDDQIFIGVFSAC-----------------------------------SALGD 526
++ GLKPD +I + +AC + G
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGS 580
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST---GYLDEALEFIEKMPME---PDVD 580
+ + FE M+K ++ +S ++G + G +AL+ E+M ME PD+
Sbjct: 581 FSDASIVFEKMTK--------RNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIV 632
Query: 581 VWEKLMNLCRMHGNLELGDR 600
+ L++ C G LE G R
Sbjct: 633 TFVSLLSACSHAGLLEEGRR 652
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G +EA EV ++++ + + T+ L+ AC ++ AL K +H V +
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MYS C S+ DA VF M +D+ SW MI G AK+G G +A+ ++ +
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+QAG++P+ + + +ACS+ + G + G+ ++V+M G
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGR-RIHQQVVEAGLATDAHVGNTLVNMYSMCG 478
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG----NLELGDRCAEIVEQLDPSRLN 614
+ +A + ++M ++ D+ + ++ H L+L DR E E L P ++
Sbjct: 479 SVKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE--EGLKPDKVT 532
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A++V+ L++Q V+ + ++++ C + K L + VH+H+ + + T N ++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 454 MYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
MY +C S+++A V+ ++ ER + SW+ M+ G+ + G E A+ + Q +Q GL PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ S+C + G + G +HF++M G++ +K I++M G ++EA E
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 571 EKM 573
+KM
Sbjct: 185 DKM 187
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 46/282 (16%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ + A E+ +E++ + + T+ ++ A AL+ KAVH +
Sbjct: 199 IGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH 258
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++KMY++C S D VF + RDL +W+TMI G A+ G E+A ++++Q
Sbjct: 259 ESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318
Query: 502 FKQAGLKPDDQIFIGVFSAC-----------------------------------SALGD 526
++ G+ P+ ++ + +AC S G
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWE 583
+ + L F+ M + I + +++ L +G+ EAL ++M +EP+ +
Sbjct: 379 IKDARLVFDKMVRKDVI-----SWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYT 433
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
++N C LE G R I +Q+ + L + G VN
Sbjct: 434 SILNACSSPAALEWGRR---IHQQVVEAGLATDAHVGNTLVN 472
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G ++ G +++A+++L +++ ++ D T + +C ALE + +H +
Sbjct: 100 GYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLF 159
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N IL MY++C S+++A VF M ++ + SW I G+A G E A +IF + +
Sbjct: 160 DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219
Query: 504 QAGLKPDDQIFIGVFSACSA 523
Q G+ P+ +I V +A S+
Sbjct: 220 QEGVVPNRITYISVLNAFSS 239
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 245/401 (61%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ +EA+ + +++ ++ + + +C + ALE K +H + +
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+++AF VF ++TE+D+ SW+TMI G+A++G G++A+ +F
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K +KPDD +GV SACS G V +GM +F SM ++YGI + KHY ++D+LG G
Sbjct: 497 MKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEAL ++ MP PD W L+ R+HG+ ELG++ AE V +++P S
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L S ++K KK+ + +E+++K H + GD SHPE ++IYA +
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEE 675
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++K+ G++ T+ VLHD+++E KE L HSE+LAV+ G+LS P PIR++KNLRV
Sbjct: 676 LDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRV 735
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K ISKI R++I+RD+ RFHHF +G CSC DYW
Sbjct: 736 CEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 34/258 (13%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLG-L 400
+G QNG++ A ++ D FA + S G V+ G + EA + +
Sbjct: 254 TGYAQNGLLSEARRLFEELPIRDVFAWTAMVS----------GFVQNGMLDEATRIFEEM 303
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECD 459
EK +S ++ ++ ++ +E+A+ + + + P R S++N ++ Y++C
Sbjct: 304 PEKNEVS-----WNAMIAGYVQSQQIEKARELFDQM-----PSRNTSSWNTMVTGYAQCG 353
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
++D A +F M +RD SW MI+G+A++G E+A+ +F + K+ G + S
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 520 ACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV---SIVDMLGSTGYLDEALEFIEKMPM 575
+C+ + + G LH + + Y+ +++ M G G ++EA + E +
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGF-----QTGYIAGNALLAMYGKCGSIEEAFDVFEDIT- 467
Query: 576 EPDVDVWEKLMNLCRMHG 593
E D+ W ++ HG
Sbjct: 468 EKDIVSWNTMIAGYARHG 485
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 66/311 (21%)
Query: 276 SLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNP 335
+L FNG + T + +SG+ S N ++D +R+ +++ P
Sbjct: 79 ALSVFNGMRRRSTVTYNAMISGYLSNN--------------------KFDCARKVFEKMP 118
Query: 336 NEGQYQ---SYSGNIQNG-MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKV 391
+ SG ++NG + A++ L N E D + L G + G V
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN---------AMLSGFAQNGFV 169
Query: 392 KEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+EA ++ +L K IS ++ L+ A +E+A+ + + + ++N
Sbjct: 170 EEARKIFDQMLVKNEIS-----WNGLLSAYVQNGRIEDARRLFDSK----MDWEIVSWNC 220
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y +DDA S+F M RD SW+ MITG+A+NGL +A +F + P
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PI 274
Query: 511 DQIFIGVFSACSAL--GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY-----L 563
+F A +A+ G V GML + ++ + +P K+ VS M+ GY +
Sbjct: 275 RDVF-----AWTAMVSGFVQNGML--DEATRIFEEMPE-KNEVSWNAMIA--GYVQSQQI 324
Query: 564 DEALEFIEKMP 574
++A E ++MP
Sbjct: 325 EKARELFDQMP 335
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y + ++ A ++F+ M E+D+ SW+ M++GFA+NG E+A IF Q
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS---MKHYV---------SIV 554
L ++ + G+ SA G + + F+S D+ IV M YV S+
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 555 DML---------------GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
D + G L EA E++P+ DV W +++ +G L D
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-DVFAWTAMVSGFVQNGML---D 294
Query: 600 RCAEIVEQLDPSRLNEKSKAGLVP--VNASELAKEKE 634
I E++ P + NE S ++ V + ++ K +E
Sbjct: 295 EATRIFEEM-PEK-NEVSWNAMIAGYVQSQQIEKARE 329
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 245/401 (61%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ +EA+ + +++ ++ + + +C + ALE K +H + +
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+++AF VF ++TE+D+ SW+TMI G+A++G G++A+ +F
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K +KPDD +GV SACS G V +GM +F SM ++YGI + KHY ++D+LG G
Sbjct: 497 MKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEAL ++ MP PD W L+ R+HG+ ELG++ AE V +++P S
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L S ++K KK+ + +E+++K H + GD SHPE ++IYA +
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEE 675
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++K+ G++ T+ VLHD+++E KE L HSE+LAV+ G+LS P PIR++KNLRV
Sbjct: 676 LDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRV 735
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K ISKI R++I+RD+ RFHHF +G CSC DYW
Sbjct: 736 CEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 120/258 (46%), Gaps = 34/258 (13%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLG-L 400
+G QNG++ A ++ D FA + S G V+ G + EA + +
Sbjct: 254 TGYAQNGLLSEARRLFEELPIRDVFAWTAMVS----------GFVQNGMLDEATRIFEEM 303
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECD 459
EK +S ++ ++ ++ +E+A+ + + + P R S++N ++ Y++C
Sbjct: 304 PEKNEVS-----WNAMIAGYVQSQQIEKARELFDQM-----PSRNTSSWNTMVTGYAQCG 353
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
++D A +F M +RD SW MI+G+A++G E+A+ +F + K+ G + S
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 520 ACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV---SIVDMLGSTGYLDEALEFIEKMPM 575
+C+ + + G LH + + Y+ +++ M G G ++EA + E +
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGF-----QTGYIAGNALLAMYGKCGSIEEAFDVFEDIT- 467
Query: 576 EPDVDVWEKLMNLCRMHG 593
E D+ W ++ HG
Sbjct: 468 EKDIVSWNTMIAGYARHG 485
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 66/311 (21%)
Query: 276 SLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNP 335
+L FNG + T + +SG+ S N ++D +R+ +++ P
Sbjct: 79 ALSVFNGMRRRSTVTYNAMISGYLSNN--------------------KFDCARKVFEKMP 118
Query: 336 NEGQYQ---SYSGNIQNG-MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKV 391
+ SG ++NG + A++ L N E D + L G + G V
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWN---------AMLSGFAQNGFV 169
Query: 392 KEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+EA ++ +L K IS ++ L+ A +E+A+ + + + ++N
Sbjct: 170 EEARKIFDQMLVKNEIS-----WNGLLSAYVQNGRIEDARRLFDSK----MDWEIVSWNC 220
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y +DDA S+F M RD SW+ MITG+A+NGL +A +F + P
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PI 274
Query: 511 DQIFIGVFSACSAL--GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY-----L 563
+F A +A+ G V GML + ++ + +P K+ VS M+ GY +
Sbjct: 275 RDVF-----AWTAMVSGFVQNGML--DEATRIFEEMPE-KNEVSWNAMIA--GYVQSQQI 324
Query: 564 DEALEFIEKMP 574
++A E ++MP
Sbjct: 325 EKARELFDQMP 335
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 40/217 (18%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N +L Y + ++ A ++F+ M E+D+ SW+ M++GFA+NG E+A IF Q
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS---MKHYV---------SIV 554
L ++ + G+ SA G + + F+S D+ IV M YV S+
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 555 DML---------------GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
D + G L EA E++P+ DV W +++ +G L D
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR-DVFAWTAMVSGFVQNGML---D 294
Query: 600 RCAEIVEQLDPSRLNEKSKAGLVP--VNASELAKEKE 634
I E++ P + NE S ++ V + ++ K +E
Sbjct: 295 EATRIFEEM-PEK-NEVSWNAMIAGYVQSQQIEKARE 329
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 247/420 (58%), Gaps = 10/420 (2%)
Query: 363 EDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD 422
E F+E S + + L + G + G + + E+L ++ + D T +++ACG
Sbjct: 472 EKVFSEMSTRNVVSWNL-MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGA 530
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
ALE K VH +L ++ MYS+C + +A +VF ++ RD +W+ M
Sbjct: 531 LSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAM 590
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
+ G+ ++G+G +AVD+F + + + P++ F V SAC G V EG F M +D+
Sbjct: 591 LAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFR 650
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA 602
+ P +HY +VD+LG G L EA EFI++MP EPD+ VW L+ C+ H N++L + A
Sbjct: 651 MKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAA 710
Query: 603 EIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEY 653
+ +L+PS N ++AG ++ +K KK ++ +E+ ++H +
Sbjct: 711 HHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTF 770
Query: 654 RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSH 713
A D +HPE D I+A + L +MKEAGY P+ RFVLHD+D+ KE AL HSE+LA+++
Sbjct: 771 VAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAY 830
Query: 714 GLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GLL +P PIRIMKNLRVCGDCH+A K ISKI RE++ RDA RFH+FK+G CSC D+W
Sbjct: 831 GLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 346 NIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
N Q G M S V NN A S + G + +L K G++KEAI++LG+++++
Sbjct: 17 NYQVGAMTSIVYNNGFASTGEELAGPRSVSGGEVWRL---CKAGRLKEAIQLLGIIKQRG 73
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ V+ T+ +++ C + E+ K VH+ ++ L + + N ++ YS+ +
Sbjct: 74 LLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE 133
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF MT RD+ +W +MI +A N A D F + K A ++P+ F+ + AC+
Sbjct: 134 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNY- 192
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
++E ++ K G+ + +++ M G + A E +KM E +V W +
Sbjct: 193 SMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK-ERNVVSWTAI 251
Query: 586 MNLCRMHGNL 595
+ H L
Sbjct: 252 IQANAQHRKL 261
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 155/376 (41%), Gaps = 55/376 (14%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+ EA E+ + + IS + TF L+ +C +AL + +H H+ V N
Sbjct: 260 KLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG-----EDAVDIFSQFKQ 504
++ MY +C+ + DA F M++RD+ SW MI G+A++G ++ + + ++
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ P+ F+ + ACS G + +G +SK G +I +M G +
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK-VGFESDRSLQTAIFNMYAKCGSIY 438
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + KM +V W L+ + G+L
Sbjct: 439 EAEQVFSKME-NKNVVAWASLLTMYIKCGDL----------------------------T 469
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+A ++ E + + S NL+ AG + K++ L+ + MK G+ P
Sbjct: 470 SAEKVFSEMSTRNVVSWNLM---------IAGYAQSGDIAKVFELL----SSMKVEGFQP 516
Query: 685 ETRFVLHDIDQEGKEEAL----LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
+ ++ ++ G AL L H+E AV GL S A ++ CG+ A
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAE--AVKLGLESDTVVAT-SLIGMYSKCGEVTEAR 573
Query: 741 KIISKIVGRELIIRDA 756
+ KI R+ + +A
Sbjct: 574 TVFDKISNRDTVAWNA 589
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 38/226 (16%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EV LLE+ P TF +++AC ALE+ + +H + ++ S I
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428
Query: 453 KMYSECDSMDDA---FS----------------------------VFSNMTERDLTSWDT 481
MY++C S+ +A FS VFS M+ R++ SW+
Sbjct: 429 NMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNL 488
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKD 540
MI G+A++G ++ S K G +PD I + AC AL + G ++H E++
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK-- 546
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G+ S++ M G + EA +K+ D W ++
Sbjct: 547 LGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAML 591
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 261/461 (56%), Gaps = 22/461 (4%)
Query: 326 QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNN--GTLEQLD 383
++R +++ P Q + NI M +Q++ HE + SR + N +
Sbjct: 181 EARLLFEKMP---QRDVVTWNI----MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIA 233
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ GK KEAI + +E+ + + T ++ AC D AL+ +HE+ R
Sbjct: 234 GYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKR 293
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY +C +++A VF M ER + SW MI G A +G E+A+ +FS
Sbjct: 294 NVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMS 353
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
Q G++P+ FIG+ ACS +G + EG F SM++DYGI+P ++HY +VD+L G L
Sbjct: 354 QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLL 413
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA EFI MPM+P+ VW L+ CR+H N+E+ + + + +LDP LN+ L
Sbjct: 414 HEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP--LNDGYYVVLSN 471
Query: 624 VNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A + K+++ KK + + V VHE+ AG+ SHP+T++I+
Sbjct: 472 IYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEE 531
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+ GY+P T VL DI++ K + + HSE+LA+ GL+++PA PIRIMKNLR+
Sbjct: 532 LLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRI 591
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA K+IS IV RE+++RD RFH F D CSCRDYW
Sbjct: 592 CEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+AI + L + + D T S +++AC + L + +H VE++ + N I+
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170
Query: 453 KMYSECDSMDDA-------------------------------FSVFSNMTERDLTSWDT 481
+Y+ C M +A + +FS M ER++ SW +
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI G+ + G ++A+ +F++ ++AG+K ++ + V +AC+ LG + GM S +
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM-RIHEYSNRH 289
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +++ +++DM G L+EA + E+M E V W ++ MHG E
Sbjct: 290 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMHGRAE 343
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER--DLTSWDTMITG 485
E + VH + + +PL + + + + S A +F + ++ + W++ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKA 102
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIV 544
A+ DA+ +F + +Q + PD V AC L D+ G +LH + + G
Sbjct: 103 LAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH--GVVEKVGFR 160
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ IV + S G + EA EKMP + DV W ++
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVTWNIMI 201
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/440 (39%), Positives = 256/440 (58%), Gaps = 16/440 (3%)
Query: 350 GMMAS---QVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLE 402
G MAS V N C F + N +L + ++ EA+++ +E
Sbjct: 239 GTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQME 298
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
+ D + + ++ ACGD AL + +HE+V R + N ++ MY++C ++
Sbjct: 299 DHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 358
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A VF M RD+ SW +MI+ + NG G DAV +FS+ + GL PD F+ V SACS
Sbjct: 359 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 418
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
G + EG +F+ M+++ IVP ++H+V +VD+LG G +DEA FI++MPMEP+ VW
Sbjct: 419 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 478
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNASELAKEK 633
L++ CR++ N+ +G A+ + QL P + N +KAG + K K
Sbjct: 479 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 538
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
KK+ + E+ ++VH + AGD SHP++ +IY + +MKEAGY+PET LHD+
Sbjct: 539 GIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDV 598
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
++E KE L HSE+LA++ +L++ +PIRI KNLRVCGDCH A K+ISKIVGRE+ I
Sbjct: 599 EEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITI 658
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD RFHHF +G+CSC DYW
Sbjct: 659 RDTNRFHHFYNGVCSCGDYW 678
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++A ++ L +H V R+ L V NG++ MY +C + +A V M
Sbjct: 139 TYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQM 198
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW++++ G A+NG +DA+++ + + GLKPD + S L V
Sbjct: 199 PCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAG------TMASLLPAVTNTC 252
Query: 532 LHFESMSKDYGIVPSMKHYVS---IVDMLGSTGYLDEALEFIEKM---PMEPDVDVWEKL 585
L S K+ + + K VS ++ + + EA++ +M ++PD +
Sbjct: 253 LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASV 312
Query: 586 MNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKS 617
+ C L LG R E V ++L P+ L E +
Sbjct: 313 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENA 346
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ Y+ C +F + ++++ ++ MI + N L DA+ +F G+ PD
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ V A S D+ GM + G+ ++ ++ M G G L EA +
Sbjct: 137 HYTYPCVLKASSGSEDLWVGM-QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVL 195
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLVPV---- 624
++MP DV W L+ C +G D E+ ++++ L + + A L+P
Sbjct: 196 DQMPCR-DVVSWNSLVAGCARNGQF---DDALEVCKEMELLGLKPDAGTMASLLPAVTNT 251
Query: 625 ---NAS---ELAKEKENKKLASQNLL 644
N S E+ + NK L S N++
Sbjct: 252 CLDNVSFVKEMFMKLANKSLVSWNVM 277
>gi|357501237|ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/388 (43%), Positives = 245/388 (63%), Gaps = 35/388 (9%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
++EG V + +E++G Q D F L++ C D K+LE K VHE + R
Sbjct: 78 FLQEGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ +Y +C S+ DA VF M +R++ S + MI G+ NGLG D + +F Q +Q
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQ 193
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PD++ F V + C+ + V EG++ FESM K+YGIVP M+HY+ + ++ G G LD
Sbjct: 194 QGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVDNIFGCAGPLD 252
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA EFIE MP+E VDVWE L N R++G+LE DR A+++ DPS K+ A +P+
Sbjct: 253 EAQEFIENMPIEAGVDVWETLRNFARIYGDLEREDR-AKLLTVRDPS----KAAADKMPL 307
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+ KK ++ N+LE +++V EYR L Q++EAGY+P
Sbjct: 308 --------PQRKKQSAINMLEEKNRVSEYRC-----------------LTGQIREAGYVP 342
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+K +S
Sbjct: 343 DTRYVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMS 402
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDY 772
KIVG +LI+RD KRFHHFKDG C+ Y
Sbjct: 403 KIVGMKLIVRDNKRFHHFKDGKCAISMY 430
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 252/404 (62%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +AI + ++ + + D T ++ AC ALE K V +VE+
Sbjct: 86 MIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKER 145
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ M+++C +D A ++F +M ER++ SW ++I G A +G G +AV +F
Sbjct: 146 VQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFE 205
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++G+ PDD +FIG+ SACS G V +G +F+SM KD+ IVP ++HY +VDML
Sbjct: 206 EMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRA 265
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + EAL+F+++MP++P+ VW L+N CR HG L+LG++ + + +P ++E +
Sbjct: 266 GLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEP--MHESNYVL 323
Query: 621 LVPVNASELAKEKEN-----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A EK+ KK+ ++E+ ++++E+ AGD SH ++ +IY +
Sbjct: 324 LSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEM 383
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +MK AGY+P T VL DID E KE+ L HSE+LA++ LL++P IRI+KN
Sbjct: 384 VDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKN 443
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCHSA K ISKI RE+++RD RFHHFK+GLCSCRD+W
Sbjct: 444 LRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDFW 487
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS----MDDAFSV 467
T+ +++AC L K+VH V + V+ N ++ MY C ++ A V
Sbjct: 12 TYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKV 71
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M + D SW MI G+ + G DA+++F + + G+ PD+ + V SAC+ LG +
Sbjct: 72 FDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGAL 131
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ES + + +++ +++DM G +D+A M E ++ W ++
Sbjct: 132 ELGKW-VESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR-ERNIVSWTSVIG 189
Query: 588 LCRMHG 593
MHG
Sbjct: 190 GLAMHG 195
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 255/443 (57%), Gaps = 32/443 (7%)
Query: 348 QNGMMAS--QVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV-KEGKVKEAIEVLGLLEKQ 404
QNG +A QV + + +DD GT + + ++G EA+ + L++++
Sbjct: 276 QNGEVAKARQVFDQIREKDD-----------GTWSAMIKVYERKGFEVEALNLFALMQRE 324
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
+ + P+ ++ C +L+ + VH + + V + ++ MY +C + A
Sbjct: 325 GVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKA 384
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F + +D+ W+++ITG+A++GL E+A+ +F + +G+ D F+GV SACS
Sbjct: 385 RQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYT 444
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V EG+ FESM Y + P +HY +VD+LG G +++A++ I+KMP+E D +W
Sbjct: 445 GKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGA 504
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLN----------EKSKAGLVPVNASELAKEKE 634
L+ CR H N+ L + A+ + QL+P K + G + +EL +
Sbjct: 505 LLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWG----DVAELRRNMR 560
Query: 635 NKKLASQ---NLLEVRSKVHEYRAG-DTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
KK++ + +EV +VH + G T HPE I ++ L ++EAGY P++ FVL
Sbjct: 561 VKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVL 620
Query: 691 HDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRE 750
HD+D+E K +L HSERLAV+ GLL P PIR+MKNLRVCGDCHSA+K+I+KI GRE
Sbjct: 621 HDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGRE 680
Query: 751 LIIRDAKRFHHFKDGLCSCRDYW 773
+I+RDA RFHHFKDG CSCRDYW
Sbjct: 681 IILRDANRFHHFKDGFCSCRDYW 703
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y + + +A F M ER++ SW M+ G+ + GL +A +F Q +
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEK- 138
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS---TGYL 563
V S LG +++ + + + I+P +K V+ +M+ G L
Sbjct: 139 ---------NVVSWTVMLGGLIQ-VRRIDEARGLFDIMP-VKDVVARTNMISGYCQEGRL 187
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
EA E ++MP +V W +++ +G +++ + E++ +
Sbjct: 188 AEARELFDEMP-RRNVISWTTMISGYVQNGQVDVARKLFEVMPE 230
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 123/281 (43%), Gaps = 33/281 (11%)
Query: 325 DQSRRQYQQNPNE---GQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ 381
D++R + P + + SG Q G +A + + F E R + + T
Sbjct: 157 DEARGLFDIMPVKDVVARTNMISGYCQEGRLA-------EARELFDEMPRRNVISWT-TM 208
Query: 382 LDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+V A ++ ++ EK +S ++ ++ +EEA + + +
Sbjct: 209 ISGYVQNGQVDVARKLFEVMPEKNEVS-----WTAMLMGYTQGGRIEEASELFDAM---- 259
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P++ V N ++ + + + A VF + E+D +W MI + + G +A+++F
Sbjct: 260 -PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLF 318
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVD 555
+ ++ G++ + I V S C++L + G +H E + + V S+ ++
Sbjct: 319 ALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASV-----LIT 373
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
M G L +A + ++ D+ +W ++ HG +E
Sbjct: 374 MYVKCGDLVKARQIFDRFS-PKDIVMWNSIITGYAQHGLVE 413
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 230/377 (61%), Gaps = 13/377 (3%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
V+ F+ ++ C D ALE +H + + + N +L MY +C SM++A S
Sbjct: 450 VNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSA 509
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M ERD+ SW+TMI G+A++G G++A+++F ++ KPDD +GV +ACS G V
Sbjct: 510 FEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G+ +F SM +D+G+ +HY ++D+LG G LDEA+ ++ MP EPD +W L+
Sbjct: 570 EKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLG 629
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKEKENK 636
R+H N ELG AE + +L+P N L + AS + E+ K
Sbjct: 630 ASRIHRNSELGRNAAEKIFELEPE--NAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVK 687
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K+ + +EV++KVH + GD+ HPE + IYA + L +MK+AGY+ T VLHD+++E
Sbjct: 688 KVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEE 747
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE L HSE+LAV++G+L P PIR++KNLRVC DCH+A K IS I GR +I+RD+
Sbjct: 748 EKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDS 807
Query: 757 KRFHHFKDGLCSCRDYW 773
RFHHF+DG CSC DYW
Sbjct: 808 NRFHHFRDGSCSCGDYW 824
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA V + +K +S ++ +M A + +EEAK + + +
Sbjct: 331 VSGYAQNGMLEEAKRVFDAMPDKNAVS-----WNAMMAAYVQRRMMEEAKELFDAM---- 381
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V+++N +L Y++ +D+A ++F M ++D SW M+ +++ G E+ + +F
Sbjct: 382 -PCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLF 440
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G + F V S C+ + + GM LH + YG+ + + +++ M
Sbjct: 441 KEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGN--ALLAMYF 498
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++EA E+M E DV W ++ HG
Sbjct: 499 KCGSMEEAHSAFEEME-ERDVVSWNTMIAGYARHG 532
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCIS 407
NGM+A+ V N E SR+ + + L G V+ +++EA ++ + ++
Sbjct: 235 NGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR--- 291
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFS 466
D+ +++ ++ + EA+ + + ++P+R V T+ I+ Y++ +++A
Sbjct: 292 -DVVSWNTMVSGYARRGDMAEARRLFD-----VAPIRDVFTWTAIVSGYAQNGMLEEAKR 345
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M +++ SW+ M+ + + + E+A ++F + + + G A
Sbjct: 346 VFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQA------ 399
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS---TGYLDEALEFIEKM 573
GML + +G++P K VS ML + G+ +E L+ ++M
Sbjct: 400 ---GML--DEARAIFGMMPQ-KDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y + +++A +F+ M +RD+ SW+TM++G+A+ G +A +F
Sbjct: 264 SWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD------ 317
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS---TGYL 563
+ P +F ++A + G GML E + + +P K+ VS M+ + +
Sbjct: 318 VAPIRDVF--TWTAIVS-GYAQNGML--EEAKRVFDAMPD-KNAVSWNAMMAAYVQRRMM 371
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
+EA E + MP +V W ++
Sbjct: 372 EEAKELFDAMPCR-NVASWNTMLT 394
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ 415
+++ +H D A + NG L V+ G+++EA E+ + D +++
Sbjct: 215 LVSLARHYFDLAPEKDAVSWNGMLA---AYVRNGRIQEARELFDSRTEW----DAISWNA 267
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTER 474
LM +EEA+ + + P R V ++N ++ Y+ M +A +F R
Sbjct: 268 LMAGYVQRSQIEEAQKMFNKM-----PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIR 322
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIF 499
D+ +W +++G+A+NG+ E+A +F
Sbjct: 323 DVFTWTAIVSGYAQNGMLEEAKRVF 347
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG+L Y + +A +F + TE D SW+ ++ G+ + E+A +F++ Q
Sbjct: 233 SWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR- 291
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
D + + S + GD+ E F D + + + +IV G L+EA
Sbjct: 292 ---DVVSWNTMVSGYARRGDMAEARRLF-----DVAPIRDVFTWTAIVSGYAQNGMLEEA 343
Query: 567 LEFIEKMPMEPDVDVWEKLM 586
+ MP + V W +M
Sbjct: 344 KRVFDAMPDKNAVS-WNAMM 362
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 256/436 (58%), Gaps = 11/436 (2%)
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV-KEGKVKEAIEVLGLLEKQCIS 407
NGM+ LN + + +++GT L + ++G EA+ + L++++ +
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+ P+ ++ CG +L+ + VH + R L + + ++ MY +C + V
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRV 387
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F + +D+ W+++I G+A++G GE A+++F + +G PD+ FIGV SAC G V
Sbjct: 388 FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKV 447
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
EG+ FESM Y + +HY +VD+LG G L+EA+ IE MP+E D VW L++
Sbjct: 448 KEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSR------LNEKSKAGLVPVNASELAKEKENKKLASQ 641
CR H NL+L + A+ + QL+PS L+ + + +EL K + ++
Sbjct: 508 ACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKS 567
Query: 642 ---NLLEVRSKVHEYRAG-DTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ +EV +KVH + G SHPE + I + L A ++EAGY P+ FV+HD+D+E
Sbjct: 568 PGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEED 627
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K +L HSE++AV++GLL P PIR+MKNLRVCGDCHSA+K+I+++ GRE+I+RDA
Sbjct: 628 KVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDAN 687
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFKDGLCSCRD+W
Sbjct: 688 RFHHFKDGLCSCRDFW 703
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y + + +A VF M ER++ SW +M+ G+ + GL ++A +F + +
Sbjct: 80 SWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEK- 138
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGYL 563
V S LG ++E + + + ++P +K V+ +M+G S G L
Sbjct: 139 ---------NVVSWTVMLGGLIEDG-RVDEARRLFDMIP-VKDVVASTNMIGGLCSEGRL 187
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV----EQLDPSRLNEKSKA 619
EA E ++MP + +V W +++ M+ +++ + E++ E + L +++
Sbjct: 188 SEAREIFDEMP-QRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRS 246
Query: 620 GLVPVNASELAKEKENKKLASQN 642
G + A+EL K K +A+ N
Sbjct: 247 GRIN-EAAELFKAMPVKPVAACN 268
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 98/223 (43%), Gaps = 16/223 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL EG++ EA E+ + ++ ++ ++ ++ ++ A+ + E ++
Sbjct: 177 MIGGLCSEGRLSEAREIFDEMPQR----NVVAWTSMISGYAMNNKVDVARKLFE----VM 228
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
T+ +LK Y+ +++A +F M + + + + MI GF NG A +F
Sbjct: 229 PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFD 288
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K+ DD + + G +E + F M ++ G+ P+ +SI+ + GS
Sbjct: 289 QMKE----KDDGTWSALIKIYERKGFELEALALFSLMQRE-GVRPNFPSIISILSVCGSL 343
Query: 561 GYLDEALEF---IEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
LD + + + + D+ V L+ + G+L G R
Sbjct: 344 ASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKR 386
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/408 (42%), Positives = 237/408 (58%), Gaps = 37/408 (9%)
Query: 369 ASRSSQN---NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
SR SQ N E L L ++G V+ A+ V+ +E+ ++V ++L+Q C D K
Sbjct: 203 VSRVSQREVVNVQEEDLKRLCRQGNVEAALHVIDEMERNGVTVSALGLAELLQVCIDLKL 262
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
LE K HE V RL S V +N +L+MY + A VF M R L SW+ MI G
Sbjct: 263 LEVGKRAHELVMRLSSNPSVIVFNKLLEMYFDLGDTRSACRVFEEMRGRTLDSWNRMILG 322
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
KNG GE+A+ IFS+ K+ G++PD FIGV SAC LG V EG+ HF SMS DYGI P
Sbjct: 323 LVKNGEGEEALAIFSKLKKDGIEPDGSTFIGVLSACECLGAVEEGLAHFNSMSTDYGITP 382
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
SM+H+ IVD+ G + EA EFI MP+EP +W+ L
Sbjct: 383 SMEHFAIIVDLFGRLQKIAEAKEFIASMPLEPSSMIWQTLQ------------------- 423
Query: 606 EQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L R++E + P+ K K++ S + + ++ + PE K
Sbjct: 424 KYLKTERVDEPA-----PLTTGSGLKLSHKKRVKSNFVSKQKN----------ASPEKSK 468
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
Y +R L +KEAGY+ +TR+VLHD+DQE KE++LL HSERLA+++GL+S+P +R
Sbjct: 469 AYEKLRSLHKGVKEAGYVSDTRYVLHDLDQEAKEKSLLYHSERLAIAYGLISTPPGTTLR 528
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLR+CGDCH+ +KI+S I RE+I+RD KRFHHF+DG CSC DYW
Sbjct: 529 IIKNLRICGDCHNFIKILSNIEKREIIVRDNKRFHHFRDGKCSCGDYW 576
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 245/399 (61%), Gaps = 14/399 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G +A+E+ +++++ I + P+ ++ C L+ + +H + R L V
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ +L MY +C ++ A VF +D+ W+++ITG+A++GLG +A+ +F +G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ PDD F+GV SACS G+V +G+ F SM Y + ++HY +VD+LG G L+EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
++ IEKMPME D +W L+ CR H L+L + A+ + L+P N L + A
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK--NAGPFILLSNIYA 626
Query: 627 S--------ELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTS-HPETDKIYALIRGLR 674
S EL + +++++ + + V KVH++ GD+S HPE +I ++ L
Sbjct: 627 SQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++EAGY P+ FVLHD+D+E K ++L HSE+LAV++GLL P PIR+MKNLRVCG
Sbjct: 687 GLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCG 746
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K+I+K+ GRE+I+RDA RFHHFKDG CSCRDYW
Sbjct: 747 DCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P++ V N ++ + + + A VF M E+D +W MI + + GL DA+++F
Sbjct: 342 PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFR 401
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVDML 557
++ G++P+ I V S C+ L ++ G +H + + + + YV+ ++ M
Sbjct: 402 MMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQF----DLDVYVASVLLSMY 457
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L +A + ++ ++ DV +W ++ HG
Sbjct: 458 IKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y +++A VF M ER++ SW M+ G+ K G+ +A +F Q +
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK- 220
Query: 507 LKPDDQIFIGVFSACSALGDVV-EGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGY 562
V S LG ++ EG + + + ++P K V+ +M+G G
Sbjct: 221 ---------NVVSWTVMLGGLLQEG--RIDEACRLFDMMPE-KDVVTRTNMIGGYCQVGR 268
Query: 563 LDEALEFIEKMP 574
L EA ++MP
Sbjct: 269 LVEARMLFDEMP 280
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++N I+ Y + +A ++F M+ER+ SW+ +++G+ NG+ +A ++F +
Sbjct: 129 IISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM-- 186
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST---G 561
P+ + V G V EGM+ + +P K+ VS MLG G
Sbjct: 187 ----PERNV---VSWTAMVRGYVKEGMI--SEAETLFWQMPE-KNVVSWTVMLGGLLQEG 236
Query: 562 YLDEALEFIEKMPMEPDV 579
+DEA + MP E DV
Sbjct: 237 RIDEACRLFDMMP-EKDV 253
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 245/399 (61%), Gaps = 14/399 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G +A+E+ +++++ I + P+ ++ C L+ + +H + R L V
Sbjct: 389 RKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVY 448
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ +L MY +C ++ A VF +D+ W+++ITG+A++GLG +A+ +F +G
Sbjct: 449 VASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSG 508
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ PDD F+GV SACS G+V +G+ F SM Y + ++HY +VD+LG G L+EA
Sbjct: 509 IMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEA 568
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
++ IEKMPME D +W L+ CR H L+L + A+ + L+P N L + A
Sbjct: 569 MDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK--NAGPFILLSNIYA 626
Query: 627 S--------ELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTS-HPETDKIYALIRGLR 674
S EL + +++++ + + V KVH++ GD+S HPE +I ++ L
Sbjct: 627 SQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLS 686
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++EAGY P+ FVLHD+D+E K ++L HSE+LAV++GLL P PIR+MKNLRVCG
Sbjct: 687 GLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCG 746
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K+I+K+ GRE+I+RDA RFHHFKDG CSCRDYW
Sbjct: 747 DCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P++ V N ++ + + + A VF M E+D +W MI + + GL DA+++F
Sbjct: 342 PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFR 401
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVDML 557
++ G++P+ I V S C+ L ++ G +H + + + + YV+ ++ M
Sbjct: 402 MMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQF----DLDVYVASVLLSMY 457
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L +A + ++ ++ DV +W ++ HG
Sbjct: 458 IKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y +++A VF M ER++ SW M+ G+ K G+ +A +F Q +
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEK- 220
Query: 507 LKPDDQIFIGVFSACSALGDVV-EGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGY 562
V S LG ++ EG + + + ++P K V+ +M+G G
Sbjct: 221 ---------NVVSWTVMLGGLLQEG--RIDEACRLFDMMPE-KDVVTRTNMIGGYCQVGR 268
Query: 563 LDEALEFIEKMP 574
L EA ++MP
Sbjct: 269 LVEARMLFDEMP 280
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++N I+ Y + +A ++F M+ER+ SW+ +++G+ NG+ +A ++F +
Sbjct: 129 IISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM-- 186
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST---G 561
P+ + V G V EGM+ + +P K+ VS MLG G
Sbjct: 187 ----PERNV---VSWTAMVRGYVKEGMI--SEAETLFWQMPE-KNVVSWTVMLGGLLQEG 236
Query: 562 YLDEALEFIEKMPMEPDV 579
+DEA + MP E DV
Sbjct: 237 RIDEACRLFDMMP-EKDV 253
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 263/468 (56%), Gaps = 34/468 (7%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMM--ASQVLNNCKHEDDFAEASR---SSQNN 376
D+++ + P N + + +G Q GM+ A V + +D + A+ SQ
Sbjct: 178 DEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
+ E L ++ G+ E V+ F+ ++ C D ALE +H +
Sbjct: 238 CSEETLQLFIEMGRCGE-------------WVNRSAFACVLSTCADIAALECGMQLHGRL 284
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R + N +L MY +C +M+DA + F M ERD+ SW+TMI G+A++G G++A+
Sbjct: 285 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 344
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+IF + KPDD +GV +ACS G V +G+ +F SM D+G+ +HY ++D+
Sbjct: 345 EIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDL 404
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG G L EA + ++ MP EPD +W L+ R+H N ELG AE + +L+P N
Sbjct: 405 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPE--NAG 462
Query: 617 SKAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
L + AS + +E+ KK+ + +EV++KVH + AGD HPE +K
Sbjct: 463 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 522
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IYA + L +MK+AGY+ T VLHD+++E KE L HSE+LAV++G+L+ P PIR
Sbjct: 523 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 582
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++KNLRVCGDCH+A K IS I GR +++RD+ RFHHF+ G CSC DYW
Sbjct: 583 VIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA V + E+ +S ++ ++ A + ++EAK + +
Sbjct: 137 VSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFN-----M 186
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V+++N +L Y++ +++A +VF M ++D SW M+ +++ G E+ + +F
Sbjct: 187 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 246
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G + F V S C+ + + GM LH + YG+ + + +++ M
Sbjct: 247 IEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYF 304
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G +++A E+M E DV W ++ HG G EI + +
Sbjct: 305 KCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALEIFDMM 350
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N ++ Y + M +A +F M RD+ SW+ M++G+A+ G D V+ F
Sbjct: 68 VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDA 124
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A ++ D + V S + G + E F++M + + + ++V +D
Sbjct: 125 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMD 178
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
EA E MP +V W ++ G LE + + Q D
Sbjct: 179 EAKELFNMMPCR-NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 222
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG+L Y +++A +F++ TE D+ SW+ +++G+ + G +A ++F +
Sbjct: 39 SWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRD 98
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + + G + GD+VE F D V + + ++V G L+EA
Sbjct: 99 VVSWNIMVSGY----ARRGDMVEARRLF-----DAAPVRDVFTWTAVVSGYAQNGMLEEA 149
Query: 567 LEFIEKMP 574
+ MP
Sbjct: 150 RRVFDAMP 157
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 252/429 (58%), Gaps = 15/429 (3%)
Query: 360 CKHEDDFAEASRSSQNNGTLE------QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF 413
C ED F A + ++ ++ + G V+ G A+++ ++ + D T
Sbjct: 172 CLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITM 231
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
++ AC D ALE K V +VE+ P V N ++ M+++C ++D A +F M
Sbjct: 232 VSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDS 291
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
R + SW ++I G A +G G DAV +F + + G+ PDD FIGV SACS G V +G +
Sbjct: 292 RTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYY 351
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
F SM +++ IVP ++HY +VD+L G++ EA EF++KMP EP+ +W ++ C G
Sbjct: 352 FGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATG 411
Query: 594 NLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLL 644
L+LG+ ++ + + +P S + K + E+ + KK+ ++
Sbjct: 412 ELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMI 471
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
EV ++++E+ AGD SH + +IY ++ + ++K+AGY+P T VL DID+E KE+AL
Sbjct: 472 EVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYR 531
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ LL++P IRI+KNLRVC DCHSA K ISK+ RE+++RD RFHHFK+
Sbjct: 532 HSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKN 591
Query: 765 GLCSCRDYW 773
GLCSCRD+W
Sbjct: 592 GLCSCRDFW 600
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC---DSMDDAFSVF 468
TF +++ C +L K VH V + V N ++ MY C D + A VF
Sbjct: 127 TFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYC-CLGEDGFEFAEKVF 185
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ + D +W MI GF + G AVD+F + + G+ PD+ + V SAC+ LG +
Sbjct: 186 DDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALE 245
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G ES + I S++ +++DM G +D+A++ +M V W ++
Sbjct: 246 LGKW-VESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVS-WTSVIAG 303
Query: 589 CRMHG 593
MHG
Sbjct: 304 LAMHG 308
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 158/403 (39%), Positives = 242/403 (60%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G+ +EA+E L+ + I VD TF ++ AC + +L E K +H +
Sbjct: 287 INGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL 346
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N + MYS+C SM++A +F +M R SW+ M+ +A++G E+ + + +
Sbjct: 347 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 406
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q G+K + F+ V S+CS G + EG +F S+ D GI +HY +VD+LG G
Sbjct: 407 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 466
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA ++I KMP EP++ W L+ CR+H +L+ G A + +LDP N + L
Sbjct: 467 KLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPG--NSSASVVL 524
Query: 622 VPV--------NASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ NA++L + + KK+ + ++V++KVHE+R DTSHP +IY +
Sbjct: 525 SNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKV 584
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L M+EAGY+P+T+ VLHD+D+E KE L HSE+LA++ GL+S+P ++ + I KNL
Sbjct: 585 EELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNL 644
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K ISKI GRE+++RD RFHHF+DG CSC+DYW
Sbjct: 645 RVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ AC + + L+ K V E + L + ++ MY+ C S ++A VF
Sbjct: 110 DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVF 169
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV---FSACSALG 525
M +++L +W +IT FA +G +A+ F +Q G+ P+ FI + F+ S L
Sbjct: 170 GRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL- 228
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG--STGYLDEALEFIEKMPMEPDVDVWE 583
E + + ++G+ + ++V++ G TG LD A +++M E + W
Sbjct: 229 ---EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWN 284
Query: 584 KLMNLCRMHG 593
L+N +HG
Sbjct: 285 VLINGYTLHG 294
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G EA+ +++++ I + TF L+ LEE +H +
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243
Query: 442 PLRVSTYNGILKMYSECDS--MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N ++ +Y C++ +D A + M E+ +T+W+ +I G+ +G +A++ +
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETY 303
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + + D FI V +AC++ + EG M+H S + + G+ + ++ +M
Sbjct: 304 QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIH--SNAVECGLDSDVIVKNALTNMYS 361
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G ++ A + MP+ V W ++ HG E
Sbjct: 362 KCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESE 398
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ ++ TF ++ + D AL + K +H V L V ++ Y++C S+ DA
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
VF M R + +W++MI+ ++ + +A IF + + G + D F+ + AC
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDAC 121
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 263/468 (56%), Gaps = 34/468 (7%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMM--ASQVLNNCKHEDDFAEASR---SSQNN 376
D+++ + P N + + +G Q GM+ A V + +D + A+ SQ
Sbjct: 303 DEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
+ E L ++ G+ E V+ F+ ++ C D ALE +H +
Sbjct: 363 CSEETLQLFIEMGRCGE-------------WVNRSAFACVLSTCADIAALECGMQLHGRL 409
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R + N +L MY +C +M+DA + F M ERD+ SW+TMI G+A++G G++A+
Sbjct: 410 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 469
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+IF + KPDD +GV +ACS G V +G+ +F SM D+G+ +HY ++D+
Sbjct: 470 EIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDL 529
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG G L EA + ++ MP EPD +W L+ R+H N ELG AE + +L+P N
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPE--NAG 587
Query: 617 SKAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
L + AS + +E+ KK+ + +EV++KVH + AGD HPE +K
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IYA + L +MK+AGY+ T VLHD+++E KE L HSE+LAV++G+L+ P PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++KNLRVCGDCH+A K IS I GR +++RD+ RFHHF+ G CSC DYW
Sbjct: 708 VIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA V + E+ +S ++ ++ A + ++EAK + +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFN-----M 311
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V+++N +L Y++ +++A +VF M ++D SW M+ +++ G E+ + +F
Sbjct: 312 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G + F V S C+ + + GM LH + YG+ + + +++ M
Sbjct: 372 IEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYF 429
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G +++A E+M E DV W ++ HG G EI + +
Sbjct: 430 KCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALEIFDMM 475
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N ++ Y + M +A +F M RD+ SW+ M++G+A+ G D V+ F
Sbjct: 193 VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDA 249
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A ++ D + V S + G + E F++M + + + ++V +D
Sbjct: 250 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMD 303
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
EA E MP +V W ++ G LE + + Q D
Sbjct: 304 EAKELFNMMPCR-NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG+L Y +++A +F++ TE D+ SW+ +++G+ + G +A ++F +
Sbjct: 164 SWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR----- 218
Query: 507 LKPDDQIFIGVF-SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ D + + S + GD+VE F D V + + ++V G L+E
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVFTWTAVVSGYAQNGMLEE 273
Query: 566 ALEFIEKMP 574
A + MP
Sbjct: 274 ARRVFDAMP 282
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/468 (37%), Positives = 263/468 (56%), Gaps = 34/468 (7%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMM--ASQVLNNCKHEDDFAEASR---SSQNN 376
D+++ + P N + + +G Q GM+ A V + +D + A+ SQ
Sbjct: 303 DEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
+ E L ++ G+ E V+ F+ ++ C D ALE +H +
Sbjct: 363 CSEETLQLFIEMGRCGE-------------WVNRSAFACVLSTCADIAALECGMQLHGRL 409
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R + N +L MY +C +M+DA + F M ERD+ SW+TMI G+A++G G++A+
Sbjct: 410 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 469
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+IF + KPDD +GV +ACS G V +G+ +F SM D+G+ +HY ++D+
Sbjct: 470 EIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDL 529
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG G L EA + ++ MP EPD +W L+ R+H N ELG AE + +L+P N
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPE--NAG 587
Query: 617 SKAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
L + AS + +E+ KK+ + +EV++KVH + AGD HPE +K
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IYA + L +MK+AGY+ T VLHD+++E KE L HSE+LAV++G+L+ P PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++KNLRVCGDCH+A K IS I GR +++RD+ RFHHF+ G CSC DYW
Sbjct: 708 VIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA V + E+ +S ++ ++ A + ++EAK + +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFN-----M 311
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V+++N +L Y++ +++A +VF M ++D SW M+ +++ G E+ + +F
Sbjct: 312 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G + F V S C+ + + GM LH + YG+ + + +++ M
Sbjct: 372 IEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYF 429
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G +++A E+M E DV W ++ HG G EI + +
Sbjct: 430 KCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALEIFDMM 475
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y + M +A +F M RD+ SW+ M++G+A+ G D V+ F A
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDAAP 251
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++ D + V S + G + E F++M + + + ++V +DEA
Sbjct: 252 VR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMDEA 305
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
E MP +V W ++ G LE + + Q D
Sbjct: 306 KELFNMMPCR-NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCIS 407
NGM+A+ V N E SR+ + + L G V+ GK+ EA E+ + +
Sbjct: 166 NGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGR--- 222
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFS 466
D+ +++ ++ + EA+ + + +P+R V T+ ++ Y++ +++A
Sbjct: 223 -DVVSWNIMVSGYARRGDMVEARRLFD-----AAPVRDVFTWTAVVSGYAQNGMLEEARR 276
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
VF M ER+ SW+ M+ + + + ++A ++F+
Sbjct: 277 VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG+L Y +++A +F++ TE D SW+ +++G+ + G +A ++F +
Sbjct: 164 SWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDR----- 218
Query: 507 LKPDDQIFIGVF-SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ D + + S + GD+VE F D V + + ++V G L+E
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVFTWTAVVSGYAQNGMLEE 273
Query: 566 ALEFIEKMP 574
A + MP
Sbjct: 274 ARRVFDAMP 282
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 236/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + + E+L ++ + D T +++ACG LE K VH +L
Sbjct: 468 IAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGL 527
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ MYS+C + +A +VF M+ RD +W+ M+ G+ ++G G +AVD+F +
Sbjct: 528 ESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKR 587
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ + P++ V SACS G V EG F M +D+ + P +HY +VD+LG G
Sbjct: 588 MLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAG 647
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EA EFI+ MP EPD+ VW L+ C+ H N++L +R A + +L+PS N
Sbjct: 648 RLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSN 707
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++AG + ++ KK ++ +E+ ++H + A D +HPE D I+A +
Sbjct: 708 IYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELET 767
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MKEAGY P+ RFVLHD+D KE+AL HSE+LA+++GLL +P+ PIRIMKNLRV
Sbjct: 768 LTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRV 827
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A K ISKI RE++ RDA RFH+F +G CSC D+W
Sbjct: 828 CGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 2/211 (0%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K G+++EAI++LG+++++ + V+ T+ +++ C A+ E+ K VH+ ++ L +
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ N ++ YS+ + + A VF MT RD+ +W +MI +A N A D F +
Sbjct: 91 IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A ++P+ F+ + AC+ ++E ++ K G+ + +++ M G +
Sbjct: 151 ANIEPNRITFLSILKACNNYS-ILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
A E KM E +V W ++ H L
Sbjct: 210 VACEVFHKMT-ERNVVSWTAIIQANAQHRKL 239
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 165/377 (43%), Gaps = 57/377 (15%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+ EA E+ + + IS + TF L+ +C +AL + +H H+ + N
Sbjct: 238 KLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVAN 297
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE-DAVD----IFSQFKQ 504
++ MY +C+S+ +A +F M++RD+ SW MI G+A++G + +++D + + ++
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G+ P+ F+ + AC+A G + +G +H E + + S++ +I +M G +
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSI 415
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA + KM +V W +++ G+L
Sbjct: 416 YEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDLS--------------------------- 447
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+A ++ E + + S NL+ AG + + K++ L+ ++A+ G+
Sbjct: 448 -SAEKVFSEMPTRNVVSWNLM---------IAGYAQNGDIVKVFELLSSMKAE----GFQ 493
Query: 684 PETRFVLHDIDQ----EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
P+ V+ ++ G E L H+E AV GL S A ++ CG A
Sbjct: 494 PDRVTVITILEACGALAGLERGKLVHAE--AVKLGLESDTVVAT-SLIGMYSKCGQVAEA 550
Query: 740 LKIISKIVGRELIIRDA 756
+ K+ R+ + +A
Sbjct: 551 RTVFDKMSNRDTVAWNA 567
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 47/277 (16%)
Query: 390 KVKEAI-EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHV--------- 436
K KE+I EV LLE+ P TF +++AC ALE+ + +H +
Sbjct: 340 KDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDR 399
Query: 437 -------------------ERLLSPLR---VSTYNGILKMYSECDSMDDAFSVFSNMTER 474
E++ S + V + L MY +C + A VFS M R
Sbjct: 400 SLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTR 459
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH 533
++ SW+ MI G+A+NG ++ S K G +PD I + AC AL + G ++H
Sbjct: 460 NVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVH 519
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
E++ G+ S++ M G + EA +KM D W ++ HG
Sbjct: 520 AEAVK--LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAGYGQHG 576
Query: 594 N-LELGDRCAEIV-EQLDP------SRLNEKSKAGLV 622
+ LE D ++ E++ P + ++ S+AGLV
Sbjct: 577 DGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLV 613
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 240/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G E++ V + K + D ++ AC D ALE + H +V +
Sbjct: 114 IAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGF 173
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + + ++ MY++ SM+DA VF M +R+ SW+++ITG A++G G DAV +F Q
Sbjct: 174 ALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQ 233
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
QAG+KP++ F+GV SACS G V EG +F M+++YGIVP + HY ++D+LG G
Sbjct: 234 MLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
LDEA FI MP+EPDV VW L+ CR+HGN EL R AE + ++ N
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSN 353
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AG +L K++ K + +EV++ +H + AG+TSHP+ +I+ +
Sbjct: 354 IYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLES 413
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK AGY+P FVL D++ + KE +L HSE+LA++ G++++ IR+ KNLRV
Sbjct: 414 LSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRV 473
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +K IS R++++RDA RFHHFKDG CSC DYW
Sbjct: 474 CGDCHTVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 38/244 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA------- 464
T S +++AC +LE+ K H ++ ++ V ++ MY+ C S++DA
Sbjct: 12 TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71
Query: 465 ------------------------FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+F M+ERD+ SW +I G+A+NG G++++++F+
Sbjct: 72 SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFN 131
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q ++ G+K D I V SAC+ L + G F + G + ++VDM +
Sbjct: 132 QMRKTGMKSDRFIMGSVLSACADLAALELGR-QFHAYVVQSGFALDIVVGSALVDMYAKS 190
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL--NEKSK 618
G +++A + +KMP +V W ++ C HG G+ + EQ+ + + NE S
Sbjct: 191 GSMEDACQVFDKMPQRNEVS-WNSIITGCAQHGR---GNDAVLLFEQMLQAGIKPNEISF 246
Query: 619 AGLV 622
G++
Sbjct: 247 VGVL 250
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 240/400 (60%), Gaps = 20/400 (5%)
Query: 390 KVKEAIEVLGLLEK---QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRV 445
K +E LGLL++ Q I D T +++AC + + A VH + +
Sbjct: 186 KADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLL 245
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ ++ +Y +C S+ A VF M ER++ +W MI+G+ +G G +A+++F Q K A
Sbjct: 246 AVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK-A 304
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+KPD F+ + SACS G V EG F SM++D+G+ P +HY +VD+LG G LDE
Sbjct: 305 SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDE 364
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------------RL 613
A +FIE+MP+ P+ VW L+ CR+H N++L + A + LDP L
Sbjct: 365 ACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTL 424
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
K K + L K + KK+A +++E+++K++ + AGD SHP+TD IY+ + L
Sbjct: 425 TGKRKEA---DSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERL 481
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++++ GY P+ FVLHD+D+E KE L HSE+LA+ GLL+ + IRI KNLRVC
Sbjct: 482 MDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVC 541
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K ISK+ GRE+++RDA RFHHFK+G CSCRDYW
Sbjct: 542 GDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P+ ++ A ++ EEA V+ V S + M++ C ++ A +F
Sbjct: 109 PSRGAILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDG 168
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ +DL +W T I + K + +A+ + Q G+ PD +GV ACS L
Sbjct: 169 IMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLAS---- 224
Query: 531 MLHFESMSKDYGIVPSMKHY-------VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
F+ +GI+ + Y +++D+ G L A + + M E ++ W
Sbjct: 225 ---FQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ-ERNIITWS 280
Query: 584 KLMNLCRMHG 593
+++ MHG
Sbjct: 281 AMISGYGMHG 290
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++AC + E +H+ V + +V N ++ MY +CD + + VF M
Sbjct: 12 TFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEM 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
+++ SW +I ++ ++ +F Q G +P
Sbjct: 72 PDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP 109
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 237/397 (59%), Gaps = 12/397 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
K +++ E L L + ++ LP T ++ ACGD AL K +HE +ER + +
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDL 303
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ MY++C +D++ VF+ M RD+ +W MI G A +G GE A+D FS+
Sbjct: 304 KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+KP+D FIGV SACS +G V EG +F SMSK Y + P ++HY +VD+LG G L E
Sbjct: 364 DIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQE 423
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEK 616
A+E I+ MP PD VW L+ CR++ N+E+ + + +L+P S + +
Sbjct: 424 AMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQ 483
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+K VN + K +K+ + +EV + VHE+ AGD SHPE+ KI ++ + A+
Sbjct: 484 AKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITAR 543
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+K GY P T VL D D++ KE AL HSE+LA++ GLLS+ + IRI+KNLRVC DC
Sbjct: 544 LKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDC 603
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H A+K+IS+ R +I+RD RFHHF +G CSC+DYW
Sbjct: 604 HIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 5/172 (2%)
Query: 428 EAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
E H+ +R+ P R + ++N ++ ++ + A +F ERDL SW +MI +
Sbjct: 186 EINLAHDLFDRM--PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAY 243
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS 546
AK +A+ +F + + A + PD + V SAC +G + G + E + ++ I
Sbjct: 244 AKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNR-IEID 302
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
+K S+VDM G +D +L M DV W ++ HG EL
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMN-NRDVFAWSAMIMGLANHGFGELA 353
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/375 (40%), Positives = 234/375 (62%), Gaps = 18/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + L+ ACG+ A++ + H + +L + N ++ MY +C +D F VF M
Sbjct: 689 TVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-GYEDGFCVFEEM 747
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E DL +W+ ++ G A+NGLG++A+ IF Q + G+ PD F+GV ACS G V EG
Sbjct: 748 PEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGW 807
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
HF SM++ YGI+P + HY +VD+LG GYL EA IE MP++PD +WE L+ CR+
Sbjct: 808 AHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRI 867
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN----------ASELAKEKENKKLASQ 641
H N+ELG R AE + Q+ KS ++ N +E+ K +++ L +
Sbjct: 868 HRNVELGQRVAERLFQMT----KPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKE 923
Query: 642 ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ ++V++K+H + GD +H + ++IY+ ++ + GY+P+T FVLHD+++E K
Sbjct: 924 PGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQK 983
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+ LL HSE+LAV G+LS+P +PI+I+KNLR+CGDCH+ +K +SK+ R++IIRD R
Sbjct: 984 QNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNR 1043
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+DG CSC DYW
Sbjct: 1044 FHHFRDGSCSCGDYW 1058
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 46/308 (14%)
Query: 334 NPNEGQYQSY-SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVK 392
NPN + + +G QNGM+ K D + + + G V+ + +
Sbjct: 486 NPNVVAWNAIIAGYTQNGML--------KEAKDLFQKMPVKNSASWAAMIAGFVQNEESR 537
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+L L + +F+ + AC + +E + +H + NG++
Sbjct: 538 EALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLI 597
Query: 453 KMYSECDS-------------------------------MDDAFSVFSNMTERDLTSWDT 481
MY++C + +DDA VF M +RD+ SW
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTA 657
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
+I+ + + G GE A+D+F G+KP+ + SAC LG + G F ++
Sbjct: 658 IISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGE-QFHALIFKL 716
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G + S++ M GY D F E+MP E D+ W ++ C +G LG
Sbjct: 717 GFDTFLFVGNSLITMYFKCGYEDGFCVF-EEMP-EHDLITWNAVLVGCAQNG---LGKEA 771
Query: 602 AEIVEQLD 609
+I EQ++
Sbjct: 772 IKIFEQME 779
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G KEG+++EA EV + E+ +S + S +Q GD K K E E+
Sbjct: 240 LTGYAKEGRIEEAREVFESMTERNVVSWN-AMISGYVQN-GDLK--NARKLFDEMPEK-- 293
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+++N ++ Y C M +A +F M ER+ SW MI+G+ +A D+F
Sbjct: 294 ---NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +PD IF+ V SA + L D +E + ++ G + +I++
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDD-LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409
Query: 561 GYLDEALEFIEKMP 574
G LD A+ F E MP
Sbjct: 410 GSLDLAMHFFETMP 423
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ +AI++ + +Q ++ T + +M A +++A+ + + + L+P V +
Sbjct: 441 GRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI---LNP-NVVAW 492
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N I+ Y++ + +A +F M ++ SW MI GF +N +A+++ + ++G
Sbjct: 493 NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV 552
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLH-----------------FESMSKDYGIVPSMKH- 549
P D F SAC+ +GDV G ++H SM G V H
Sbjct: 553 PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612
Query: 550 -----------YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN--LCRMHGNLE 596
+ S++ L LD+A EKMP + DV W +++ + HG +
Sbjct: 613 FRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP-KRDVVSWTAIISAYVQAGHGEVA 671
Query: 597 LGDRCAEIVEQLDPSRLNEKS 617
L + + P++L S
Sbjct: 672 LDLFLDMLARGIKPNQLTVTS 692
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST-YNG---- 450
E + K C +V P S + L++ + + L P+ + T Y G
Sbjct: 344 EAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGS-----LRPIAIKTGYEGDVVV 398
Query: 451 ---ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
IL Y+ S+D A F M ER+ SW TMI FA+ G +DA+ ++ + + +
Sbjct: 399 GSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV 458
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ +A + +G + + L F+ + + P++ + +I+ G L EA
Sbjct: 459 ATKT----AMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAK 509
Query: 568 EFIEKMPME 576
+ +KMP++
Sbjct: 510 DLFQKMPVK 518
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 374 QNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH 433
Q N +++L L G+V+EA V + I D+ +++ ++ ++EA+ +
Sbjct: 173 QCNTRIQELGRL---GRVEEARRVFN----EMIQRDVVSWNSMINGYSQNGKVDEARLLF 225
Query: 434 EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE 493
+ + T+ +L Y++ +++A VF +MTER++ SW+ MI+G+ +NG +
Sbjct: 226 DA----FVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLK 281
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
+A +F + P+ + ++ VV G H MS+ + M S+
Sbjct: 282 NARKLFDEM------PEKNV--------ASWNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
M+ +GY+ + + W+ + +CR
Sbjct: 328 SWMVMISGYVH----------ISDYWEAWDVFVKMCR 354
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 242/403 (60%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+ + +E++ ++ +FS + C D ALE K +H + +
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MY +C S+++A +F M +D+ SW+TMI G++++G GE A+ F
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K+ GLKPDD + V SACS G V +G +F +M++DYG++P+ +HY +VD+LG G
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L++A ++ MP EPD +W L+ R+HGN EL + A+ + ++P N L
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE--NSGMYVLL 618
Query: 622 VPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS ++K KK+ + +E+++K H + GD HPE D+I+A +
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +MK+AGY+ +T VLHD+++E KE + HSERLAV++G++ + PIR++KNL
Sbjct: 679 EELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNL 738
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A+K +++I GR +I+RD RFHHFKDG CSC DYW
Sbjct: 739 RVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 440 LSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ P R VST+N ++ Y++C + +A ++F M +RD SW MI G++++G +A+ +
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
F Q ++ G + + F S C+ DVV
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCA---DVV 423
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSV 467
DL +++ +++ + L +A+ + E + P R V ++N +L Y++ +DDA SV
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFE-----IMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M E++ SW+ +++ + +N E+A +F + L + + G +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK----KKI 235
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
VE F+SM+ V + + +I+ +G +DEA + ++ P++ DV W +++
Sbjct: 236 VEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVS 289
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G VK+ K+ EA + + + D+ +++ ++ + ++EA+ + + S
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE-----S 276
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P++ V T+ ++ Y + +++A +F M ER+ SW+ M+ G+ + E A ++F
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + G ++ C G + E F+ M K + + +++ +
Sbjct: 337 VMPCRNVSTWNTMITG-YAQC---GKISEAKNLFDKMPKRDPV-----SWAAMIAGYSQS 387
Query: 561 GYLDEALEFIEKMPME 576
G+ EAL +M E
Sbjct: 388 GHSFEALRLFVQMERE 403
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 420 CGDAKALEEAKAVHEHVE--RLLSPLRV---------STYNGILKMYSECDSMDDAFSVF 468
CGD+ E A+ ++ R LRV +YNG++ Y + A +F
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 469 SNMTERDLTSWDTMITGFAKN 489
M ERDL SW+ MI G+ +N
Sbjct: 119 DEMPERDLVSWNVMIKGYVRN 139
>gi|297602164|ref|NP_001052155.2| Os04g0174800 [Oryza sativa Japonica Group]
gi|255675179|dbj|BAF14069.2| Os04g0174800 [Oryza sativa Japonica Group]
Length = 299
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/324 (47%), Positives = 225/324 (69%), Gaps = 26/324 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKP 509
+L+MY++C +M+ A F +M +R++ SW MI G+A NGLG+ A+ +F + K + G+ P
Sbjct: 1 MLEMYAKCAAMNHARRTFDHMPDRNMDSWHIMIDGYAVNGLGDVALQLFEEMKTKYGIAP 60
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F V +AC+ + E L+F++MS+D+GI P ++HYV I+++LG +G+L+EA+E+
Sbjct: 61 TAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNEAVEY 120
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL 629
IEK+P EP VWE L+NL RM+G+++L DR E++ LDP++ VN +L
Sbjct: 121 IEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTK-----------VNPKKL 169
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
++L N+L+ R+K+ EYR P+ +K + E Y+P+TR+V
Sbjct: 170 PTPPPKRRLGI-NMLDGRNKLVEYRLP----PKIEK---------KVVNEQRYVPDTRYV 215
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
LHDIDQE KE+ALL HSERLA+++GL+S+PAR P+RI+KNLR+CGDCH+A+KI+S+IVGR
Sbjct: 216 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGR 275
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
ELI+RD KRFHHFKDG CSC DYW
Sbjct: 276 ELIVRDNKRFHHFKDGKCSCGDYW 299
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 228/371 (61%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ L+ + + + +H V ++ +S N ++ MYS+C + + A VF++M
Sbjct: 469 TYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDM 528
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ ++ +W ++I GFAK+G A+++F + G+KP+D +I V SACS +G + E
Sbjct: 529 EDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAW 588
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
HF SM ++GIVP M+HY +VD+LG +G L EA+EFI MP + D VW + CR+
Sbjct: 589 KHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRV 648
Query: 592 HGNLELGDRCAEIV---EQLDPSRLNEKSKAGLVPVNASELA------KEKENKKLASQN 642
H N +LG+ A+++ E DP+ S ++A K+K+ K A +
Sbjct: 649 HRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSS 708
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV ++VH++ GDT HP+ +IY + L ++K GY+P T FVLHD++ E KE+ L
Sbjct: 709 WIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYL 768
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LAV+ L+S+P PIR+ KNLRVCGDCH+A+K IS + GRE+++RDA RFHH
Sbjct: 769 FQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHM 828
Query: 763 KDGLCSCRDYW 773
KDG CSC DYW
Sbjct: 829 KDGTCSCNDYW 839
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 385 LVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
L + G EAI++ L +L D T + L+ C + + L K +H V R L
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG--EDAVDIFS- 500
+ ++ MY++C + +A VF M E ++ SW ++ G+ + G G +A+ +FS
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSN 355
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGD 526
Q G+ P+ F GV AC++L D
Sbjct: 356 MLLQGGVAPNCFTFSGVLKACASLPD 381
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L T S L++ C K K +H + PL N ++ +YS+ + AFS+F
Sbjct: 52 LITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQ 111
Query: 470 NM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGD 526
+M ++RD+ S+ ++I+ FA N AV++F Q Q G+ P++ F V AC G
Sbjct: 112 SMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGF 171
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDML---GSTGYLDEALEFIEKMPMEPDVDVWE 583
G+ F + K + ++DM S L+ A + +KM E +V W
Sbjct: 172 FKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMR-EKNVVTWT 230
Query: 584 KLMNLCRMHG 593
++ +G
Sbjct: 231 LMITRLAQYG 240
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFS 519
++ A VF M E+++ +W MIT A+ G ++A+D+F + +G PD G+ S
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C+ + + G S G+V + S+VDM G + EA + + M E +V
Sbjct: 271 VCAEIQFLSLGK-ELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR-EHNV 328
Query: 580 DVWEKLMN 587
W L+N
Sbjct: 329 MSWTALVN 336
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 246/392 (62%), Gaps = 20/392 (5%)
Query: 398 LGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE--RLLSPLRVSTYNGIL 452
+GL K I+ P T ++ AC D ALE K + ++E R+L + +S N ++
Sbjct: 196 VGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS--NALV 253
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
M+++C +D A +F NM++R + SW ++I G A +G G +AV +F + K +G+ P+D
Sbjct: 254 DMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDI 313
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
FIG+ SACS G V G +F M++ +GIVP ++HY +VD+L G + EALEF+E+
Sbjct: 314 AFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVER 373
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MP+EP+ +W L++ CR+HG L+LG+ ++ + + +P ++E + L + L E
Sbjct: 374 MPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEP--MHESNYVLLSNIYGKMLDWE 431
Query: 633 KENK-----------KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
K++K K+ ++E+ +++HE+ GD SH + ++I ++ + +MK AG
Sbjct: 432 KKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAG 491
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y P T V DID+E KE+AL HSE+LA++ LL++P +PIRI KNLRVCGDCHSA K
Sbjct: 492 YAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASK 551
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKI RE+++RD RFHHF+DG CSC D+W
Sbjct: 552 FISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS-MDDA 464
IS + F +++AC + L KAVH + + + N ++ MY C M+ A
Sbjct: 105 ISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFA 164
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F M + D +W MI G+A+ G AV +F + + AG+ PDD + V SAC+ L
Sbjct: 165 RKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDL 224
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G + G ES + ++ +++ ++VDM G +D+AL M V W
Sbjct: 225 GALELGKW-IESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVS-WTS 282
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
++ MHG R E V S E +G+VP
Sbjct: 283 VIVGLAMHG------RGLEAV-----SLFEEMKASGMVP 310
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK KEAI + +E+ + + T ++ AC D AL+ +HE+ R
Sbjct: 198 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 257
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY +C +++A VF M ER + SW MI G A +G E+A+ +FS
Sbjct: 258 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 317
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q G++P+ FIG+ ACS +G + EG F SM++DYGI+P ++HY +VD+L
Sbjct: 318 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 377
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L EA EFI MPM+P+ VW L+ CR+H N+E+ + + + +LDP LN+
Sbjct: 378 GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP--LNDGYYVV 435
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A + K+++ KK + + V VHE+ AG+ SHP+T++I+
Sbjct: 436 LSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQR 495
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
L +M+ GY+P T VL DI++ K + + HSE+LA+ GL+++PA PIRIMKN
Sbjct: 496 WEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKN 555
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCHSA K+IS IV RE+++RD RFH F D CSCRDYW
Sbjct: 556 LRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLT----------------------------- 477
+N LK +E DS DA +F + + D+
Sbjct: 128 VWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVV 187
Query: 478 ------SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
SW +MI G+ + G ++A+ +F++ ++AG+K ++ + V +AC+ LG + GM
Sbjct: 188 EKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 247
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S +G +++ +++DM G L+EA + E+M E V W ++ M
Sbjct: 248 -RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAM 305
Query: 592 HGNLE 596
HG E
Sbjct: 306 HGRAE 310
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 249/406 (61%), Gaps = 18/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLL 440
L G + G ++ A+++ L K+ + + TFS ++ AC A +E+ K H +
Sbjct: 465 LSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 524
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++ +++ A VF +RDL SW++MI+G+A++G G+ ++ IF
Sbjct: 525 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 584
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + L+ D FIGV SAC+ G V EG +F+ M KDY IVP+M+HY +VD+
Sbjct: 585 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 644
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L++A++ I KMP +W L+ CR+H N++LG+ AE + L P + S A
Sbjct: 645 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP----QDSAAY 700
Query: 621 LVPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
++ N +L K+ KK A + +EV++K + AGD SHP++D+IY
Sbjct: 701 VLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIY 760
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L ++K+AGY P+T++VLHD+++E KE L HSERLA++ GL+++P PI+I+
Sbjct: 761 LKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIV 820
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+ +K+ISKI GR++++RD+ RFHHFK G CSC DYW
Sbjct: 821 KNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G EA E+ + + + + F+ +++ C + K + AK +H V + S
Sbjct: 266 IAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS 325
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ ++ YS+C +DDAF +F M +++ SW +I+G+ +NG + A+++F
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q ++ G++P+ + + +A +A V +H + +Y PS+ +S D
Sbjct: 386 QMRREGVRPNHFTYSTILTANAA---VSPSQIHALVVKTNYENSPSVGTALS--DSYSKI 440
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +EA + E + E D+ W +++ G++E
Sbjct: 441 GDANEAAKIFELID-EKDIVAWSAMLSGYAQMGDIE 475
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 8/232 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ A+ + + ++ + + T+S ++ A A +H V +
Sbjct: 368 ISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNY 423
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S + YS+ ++A +F + E+D+ +W M++G+A+ G E AV IF Q
Sbjct: 424 ENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQ 483
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P++ F V +AC+A VE F S S G ++ ++V M G
Sbjct: 484 LAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRG 543
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
++ A E + K ++ D+ W +++ HG G + +I E++ L
Sbjct: 544 NIESANE-VFKRQVDRDLVSWNSMISGYAQHG---CGKKSLKIFEEMRSKNL 591
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+ + L + D + S +++ CG K VH + VS +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY + +S++D VF M +++ SW +++ G+ +NGL E A+ +FSQ + G+KP+
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F V +A G V +G + +M G+ ++ S+V+M + + +A +
Sbjct: 194 FTFAAVLGGLAADGAVEKG-VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 572 KM 573
M
Sbjct: 253 SM 254
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G ++A+++ ++ + I + TF+ ++ A+E+ VH V +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MYS+ + DA +VF +M R+ SW++MI GF NGL +A ++F +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV 527
+ G+K IF V C+ + ++
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEM 310
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 241/390 (61%), Gaps = 10/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A+++ +EK + D TF+ ++ ACGD AL + +HE+VE+ + N ++
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLI 330
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C +DDA VF M RD+ SW ++I+ + G G +AV +F++ +G PD
Sbjct: 331 DMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSI 390
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + SACS G + EG ++F+ M+ DY I P ++HY +VD+LG G +DEA I++
Sbjct: 391 AFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQ 450
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVP-- 623
MP+EP+ VW L++ CR+ N+++G A+ + QL P + N +KAG
Sbjct: 451 MPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEV 510
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+ K K+ +K + +E+ ++VH + AGDTSHP++ +IY + L A+MKE GY+
Sbjct: 511 TEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYV 570
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
PET LHD+++E KE L HSE+LA+ LL++ IRI KNLRVCGDCH A K+I
Sbjct: 571 PETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT-QEYQIRITKNLRVCGDCHIAAKLI 629
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SKIV RE+I+RD RFHHFKDG+CSC DYW
Sbjct: 630 SKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC ++ L +H V ++ + NG++ MY +C + +A VF M
Sbjct: 121 TYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM 180
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ SW++M+ G+A N +DA++I + + G KPD + A + E +
Sbjct: 181 IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS--ENV 238
Query: 532 LHFESMSKDYGIVPSMKHYVSI-VDMLGS--TGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
L+ E + + + V I V M S T +D L+ +EK +EPD + ++
Sbjct: 239 LYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQ-MEKCRVEPDAITFASVLPA 297
Query: 589 CRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
C L LG R E VE +L P+ L E S
Sbjct: 298 CGDLSALLLGRRIHEYVEKKKLCPNLLLENS 328
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L +F L +A ++ K +H + L S S +++ Y+ C VF
Sbjct: 18 LTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD 77
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M++R++ ++ MI + N +D + +F + G +PD+ + V ACS ++
Sbjct: 78 EMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY 137
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G+L + K G+ ++ ++ M G G L EA ++M + DV W ++
Sbjct: 138 GLLIHGDVLK-VGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMV 192
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 245/408 (60%), Gaps = 23/408 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERL 439
+ G + G + A+E +++Q + + +F L+ AC ALEE K VH + +L
Sbjct: 706 IAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKL 765
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+RV ++ MY++C S +A VF N+ E+++ +W+ MI +A++GL A+ F
Sbjct: 766 QGDVRVGA--ALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFF 823
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++ G+KPD F + SAC+ G V+EG F SM +YG++P+++HY +V +LG
Sbjct: 824 NCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGR 883
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
EA I +MP PD VWE L+ CR+HGN+ L + A + +LN ++ A
Sbjct: 884 ARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAAN-----NALKLNARNPA 938
Query: 620 GLVPV-----------NASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ + + +++ + E + K ++ +EV + +HE+ A D SHPET +
Sbjct: 939 VYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAE 998
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IYA ++ L +M+EAGY P+T+ VLHD+ + +E +L HSERLA+++GL+ +P PIR
Sbjct: 999 IYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIR 1058
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I KNLR+CGDCH+A K ISK+VGRE+I RD+ RFH FK+G CSC DYW
Sbjct: 1059 IFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +G+ +AIE+ ++ + TFS +++ C + L+E K V ++
Sbjct: 605 IGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY 664
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N ++ YS+ SM DA VF M RD+ SW+ +I G+A+NGLG+ AV+ Q
Sbjct: 665 ELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQ 724
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ + P+ F+ + +ACS+ + EG +H E + + + ++ +++ M
Sbjct: 725 MQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRK--LQGDVRVGAALISMYAKC 782
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G EA E + + +E +V W ++N HG
Sbjct: 783 GSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHG 814
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 139/314 (44%), Gaps = 12/314 (3%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTL---EQ 381
D+ +R ++ EG + +I+ G + C D +A + + + +
Sbjct: 246 DEGKRIHKLTVEEG----LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L + G EA E + ++++ T+ ++ AC +KALE K +H H+
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY+ C + A +F M +RDL SW+ +I G+A+ +A+ ++ Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP F+ + SAC+ +G + E + + GI + ++++M G
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 480
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKSK- 618
L EA E DV W ++ HG+ E + + + E+L+P + S
Sbjct: 481 SLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 619 AGLVPVNASELAKE 632
+G A EL K+
Sbjct: 540 SGCKNPEALELGKQ 553
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEAS---RSSQNNGTLE---QLDGLVKEGKVKEAIEV 397
SG NG +A+ ++N + EA +Q + + G + G + A ++
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
++ + + D TF+ ++ C + +ALE K +H + L V+ N ++ MY
Sbjct: 520 FQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ DA +VF ++ RD+ SW MI G A G A+++F Q + G +P F +
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSI 639
Query: 518 FSACSALGDVVEGMLHFE-SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
C++ + EG ++ Y + + + +++ +G + +A E +KMP
Sbjct: 640 LKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSR 697
Query: 577 PDVDVWEKLM 586
D+ W K++
Sbjct: 698 -DIVSWNKII 706
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T+ L+Q C + L EAK +H + VE + P + N ++ MY +C S+ DA VF
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGP-DIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M RD+ SW+++I+ +A+ G + A +F + + AG P+ +I + +AC + ++ G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+H + + Y P +++ S++ M G G L A
Sbjct: 148 KKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRA 182
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ AC LE K +H + + N +L MY +C + A VF+ +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ RD+ S++TM+ +A+ ++ + +F Q G+ PD +I + A + + EG
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++ + G+ ++ ++V M G +D A + K + DV V+ L+
Sbjct: 250 -RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF-KGTADRDVVVYNALIAALAQ 307
Query: 592 HGN 594
HG+
Sbjct: 308 HGH 310
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 240/403 (59%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G+ +EA+E L+ + I VD TF ++ AC + +L E K +H +
Sbjct: 536 INGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL 595
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N + MYS+C SM++A +F +M R SW+ M+ +A++G E+ + + +
Sbjct: 596 DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRK 655
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q G+K + F+ V S+CS G + EG +F S+ D GI +HY +VD+LG G
Sbjct: 656 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 715
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA ++I KMP+EP + W L+ CR+ +L+ G A + +LDP N + L
Sbjct: 716 KLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPG--NSSASVVL 773
Query: 622 VPV--------NASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ NA++L + + KK+ + ++V++KVHE+R DTSHP +IY +
Sbjct: 774 SNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKV 833
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L M+EAGY+P+T+ VLHD+D+E KE L HSE+LA++ GL+S+P + + I KNL
Sbjct: 834 EELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNL 893
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K ISKI GRE+++RD RFHHF+DG CSC+DYW
Sbjct: 894 RVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 360 CKHEDDFAEA-SRSSQNNGTLEQ--LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
C+ +D A+ R Q N + G EA+ +++++ I + TF L
Sbjct: 309 CRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISL 368
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ LEE +H + + N ++ +Y C+S DDA +VF + +L
Sbjct: 369 LNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNL 428
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
SW++MI + + +DA+ +F +Q G++PD F+ + AC+ +G
Sbjct: 429 ISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQ 487
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++ G+ S S+V+M G LD A +++M E + W L+N +HG
Sbjct: 488 CVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHG 543
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL---SPLRVSTYN 449
+A+++ +++Q I D F ++ AC K VH+ VE SPL
Sbjct: 446 DALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPL---VQT 502
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++ +D A + M E+ +T+W+ +I G+A +G +A++ + + + +
Sbjct: 503 SLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPV 562
Query: 510 DDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D FI V +AC++ + EG M+H S + + G+ + ++ +M G ++ A
Sbjct: 563 DKVTFISVLNACTSSTSLAEGKMIH--SNAVECGLDSDVIVKNALTNMYSKCGSMENARR 620
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ MP+ V W ++ HG E
Sbjct: 621 IFDSMPIRSAVS-WNGMLQAYAQHGESE 647
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ AC + + L+ K V E + L + ++ MY+ C S +DA VF
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV---FSACSALG 525
M + +L +W +IT FA +G +A+ F +Q G+ P+ FI + F+ S L
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL- 378
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
E + + ++G+ + ++V++ G D+A +++ + P++ W +
Sbjct: 379 ---EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSM 434
Query: 586 MNL---CRMH 592
+ + C H
Sbjct: 435 IGIYVQCERH 444
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS C S+ DA + F + R++ SW+ MI+ ++ ++A+ +F G+ P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ V ++C + ++ +G+L ++S + G + ++++M G G L +A E+M
Sbjct: 61 LVAVLNSCGSFRELRDGIL-VHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 574 PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
E +V W ++ + + G C ++ +L L E KA ++
Sbjct: 120 A-EKNVVTWNAMLGVYSLQGC------CWKLAVELFTRMLLEGVKANVI 161
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K A+E+ + + + ++ TF ++ + D AL + K +H V L V +
Sbjct: 142 KLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTAL 201
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C S+ DA VF M R + +W++MI+ ++ + +A IF + +Q G + D
Sbjct: 202 VNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDR 261
Query: 512 QIFIGVFSAC 521
F+ + AC
Sbjct: 262 VTFLSILDAC 271
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE-HVER-LLSPLRVSTYN 449
+EA+ + + + ++ + T ++ +CG + L + VH +ER V+T
Sbjct: 40 QEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVAT-- 97
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQAGLK 508
+L MY +C ++ DA SVF M E+++ +W+ M+ ++ G + AV++F++ G+K
Sbjct: 98 ALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVK 157
Query: 509 PDDQIFIGVFSA 520
+ F+ V ++
Sbjct: 158 ANVITFLNVLNS 169
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 246/429 (57%), Gaps = 14/429 (3%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
L + KH + + + + G + G EA+E+ L+ + + T + +
Sbjct: 376 LGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAV 435
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER-D 475
+ C LE K +H R L S N I+ MY+ S+ A VF + R +
Sbjct: 436 LSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKE 495
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+W +MI A++GLGEDAV +F + + G+KPD F+GV SAC+ +G V EG +F+
Sbjct: 496 TVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQ 555
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
+ +GIVP M HY +VD+L G EA EFI++MP+EPD W L++ CR+H N
Sbjct: 556 QLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNA 615
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPV--------NASELAKEKENKKLASQ---NLL 644
+L + AE + +DP N + + L V +A+++ K +++K + + +
Sbjct: 616 DLAELAAEKLLSIDPG--NSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWT 673
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
+ ++VH + A D HP+ D +Y + +K+AG++P+ + VLHD+D E KEE L
Sbjct: 674 HIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSR 733
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GL+S+P + +RIMKNLRVC DCH+A+K ISK+ RE+I+RDA RFHHFKD
Sbjct: 734 HSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKD 793
Query: 765 GLCSCRDYW 773
G CSC+DYW
Sbjct: 794 GFCSCKDYW 802
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+N +L +Y++ + DA +VF+ M ERD SW M+ G + G +A+ +F
Sbjct: 96 VFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVT 155
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
GL P V S+C+A G S G+ + S+++M G G +
Sbjct: 156 DGLSPTQFTLTNVLSSCAATEARGVGR-KVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
A E+MP E V W +++L G ++L
Sbjct: 215 TARAVFERMP-ERSVSSWNAMVSLDAHLGRMDLA 247
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 37/273 (13%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H +A+ + + N S+Y GG + ++RR + + P Q ++ N
Sbjct: 46 HARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIP-AAQRNVFTWNSLLS 104
Query: 351 MMA-SQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVD 409
+ A S L + + FAE + T+ + GL + G+ EAI++ + +S
Sbjct: 105 LYAKSGRLADARAV--FAEMPERDPVSWTV-MVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T + ++ +C +A + VH V +L V N +L MY +C + A +VF
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 470 NMTERDLTSWDTM-------------------------------ITGFAKNGLGEDAVDI 498
M ER ++SW+ M I G+ +NGL A+
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWF 281
Query: 499 FSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
FS+ + + PD+ V SAC+ LG V G
Sbjct: 282 FSRMLSYSTMAPDEFTITSVLSACANLGMVSIG 314
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
++E A+ V + + +++ L V ++ +L+ Y + M A +F M+ RD+ +W MI
Sbjct: 345 SVENARGVMQ--QAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIV 402
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGI 543
G+ +NG ++A+++F ++G +P+ V S C++L + G +H +++
Sbjct: 403 GYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQ 462
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
S+ + SIV M +G L A +++ + W ++ HG LG+
Sbjct: 463 SSSVSN--SIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG---LGEDAVG 517
Query: 604 IVEQL 608
+ E++
Sbjct: 518 LFEEM 522
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 240/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ +EA++V L++ + + ++ + ++ AC + L+ + VH +VER
Sbjct: 215 MIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYK 274
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V+ ++ MY++C ++D A VF M ER++ +W + I G A NG GE+++D+F+
Sbjct: 275 VRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFN 334
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K+ G++P+ FI V CS +G V EG HF+SM YGI P ++HY +VDM G
Sbjct: 335 DMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRA 394
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L EAL FI MPM P V W L++ CRM+ N ELG+ + +L+ N+ +
Sbjct: 395 GRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDK--NDGAYVL 452
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A + K K KKL +++EV +VHE+ GD SHP D+I
Sbjct: 453 LSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMK 512
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + ++ +GY+ T VL DI++E KE+AL HSE++A++ GL+S PIR++ N
Sbjct: 513 LEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMN 572
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+ K+ISKI RE+I+RD RFHHFKDG CSC+DYW
Sbjct: 573 LRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ T +L ++C +D A +F M ERD +W+ MI G+A+ G +A+D+F +
Sbjct: 178 LVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQM 237
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+K ++ + V SAC+ L V++ + + Y + ++ ++VDM G +D
Sbjct: 238 EGVKLNEVSMVLVLSACTHL-QVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVD 296
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A++ M E +V W + M+G
Sbjct: 297 RAMQVFWGMK-ERNVYTWSSAIGGLAMNG 324
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/404 (39%), Positives = 239/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G A+ + ++ + D T ++ AC D ALE K + ++ER
Sbjct: 304 MIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKN 363
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ M+++C +D A VF M R + SW +MI G A +G G +AV +F
Sbjct: 364 IMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFD 423
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+ PDD FIGV SACS G V +G +F +M + IVP ++HY +VDML
Sbjct: 424 EMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRA 483
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++EALEF+ MP+EP+ +W ++ C G L+LG+ A+ + + +PS +E +
Sbjct: 484 GRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPS--HESNYVL 541
Query: 621 LVPVNASELAKEKENK-----------KLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A L EK+ K K+ ++E+ ++++E+ AGD SH + +IY +
Sbjct: 542 LSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEM 601
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + ++K AGY+P T VL DID+E KE+AL HSE+LA++ LLS+P PIRI+KN
Sbjct: 602 VEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKN 661
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCHSA K ISK+ RE+++RD RFHHFK+GLCSC D+W
Sbjct: 662 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 15/242 (6%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+ + + +S + TF +++AC LE AVH + + N ++
Sbjct: 211 ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVH 270
Query: 454 MYSEC-----DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
MY C A VF +D +W MI G+A+ G AV +F + + G+
Sbjct: 271 MYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVC 330
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD+ + V SAC+ LG + G ES + I+ S++ +++DM G +D A++
Sbjct: 331 PDEITMVSVLSACADLGALELGKW-LESYIERKNIMRSVELCNALIDMFAKCGDVDRAVK 389
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGN-LELGDRCAEIVEQ-LDPS------RLNEKSKAG 620
+M + V W ++ MHG LE E++EQ +DP L+ S +G
Sbjct: 390 VFREMKVRTIVS-WTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSG 448
Query: 621 LV 622
LV
Sbjct: 449 LV 450
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 266/444 (59%), Gaps = 22/444 (4%)
Query: 347 IQNGMMA----SQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE 402
I+N ++A S + NC E+ F+ S + G + + +A++++ L+
Sbjct: 343 IENALLACYGKSGEMENC--EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMM 400
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
++ +D TF+ ++ AC LE VH R V + ++ MYS+C +D
Sbjct: 401 QRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRID 460
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A F+ M R+L SW++MI+G+A++G G++A+ +F++ K +G PD F+GV SACS
Sbjct: 461 YASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACS 520
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+G V EG +F+SM++ YG+VP ++HY +VD+LG G LD+ FI KMP++P++ +W
Sbjct: 521 HIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIW 580
Query: 583 EKLMN-LCRMHG-NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------EL 629
++ CR +G ELG R AE++ +DP N + L + AS
Sbjct: 581 RTVLGACCRGNGRKTELGRRAAEMLFNMDPQ--NAVNYVLLSNMYASGGKWEDMARTRRA 638
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
+E KK A + + ++ VH + AGD SHPE IYA ++ L ++++AGY+P+ +F
Sbjct: 639 MREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFA 698
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
L+D++ E KEE L HSE+LAV+ +L+ + PIRIMKNLRVCGDCHSA K ISK+V R
Sbjct: 699 LYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDR 757
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
+++RD+ RFHHF+DG CSCRDYW
Sbjct: 758 SIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 5/140 (3%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALE-EAKAVHEHVERL-LSPLRVSTYNG 450
+ G+L++ LP F ++AC ++ + + VH + R L+ +V+ NG
Sbjct: 84 DACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNG 143
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C +D A SVF M ++D SW++MITG +N EDAV ++ ++ GL P
Sbjct: 144 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 203
Query: 511 DQIFIGVFSACSALGDVVEG 530
+ I S+C++LG ++ G
Sbjct: 204 NFALISALSSCASLGCILLG 223
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ +C + + H +L + VS N +L +Y+E + + VFS M ERD
Sbjct: 211 LSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQ 270
Query: 477 TSWDTMITGFAKNGLG-EDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
SW+T+I A +G +A+++F + +AG P+ FI + + S+L
Sbjct: 271 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y A +F M +R+ +W +I+G+ +NG+ EDA + + G
Sbjct: 39 NTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFL 98
Query: 509 PDDQIFIGVFSAC 521
P+ F AC
Sbjct: 99 PNRFAFGSAIRAC 111
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 240/402 (59%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V++ +EA+ + ++ + D T + L+ AC ALE K +H ++E+
Sbjct: 179 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEK 238
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V+ ++ MY++C S++ A VF M E+D+ +W +I G A G G A+++F
Sbjct: 239 IEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 298
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + +KPD F+GV +ACS G V EG+ +F SM YGI PS++HY +VDMLG
Sbjct: 299 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 358
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G + EA + I+ MPM PD V L++ CR+HGNL + +R A+ + +LDP S
Sbjct: 359 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 418
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ K EL E+ KK + +EV VHE+ GD SHP++ +IY +
Sbjct: 419 NIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLD 478
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K AGY+P+ VL D+D++ KE L HSE+LA++ GLLS+ PIR++KNLR
Sbjct: 479 DMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLR 538
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHSA+K IS++ RE+I+RD RFHHF G CSCRD+W
Sbjct: 539 VCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++AI L+ Q + D TF L ++CG L E K +H H +L N +
Sbjct: 60 RQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTL 116
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK----------------------- 488
+ MYS C + A VF M + + SW TMI +A+
Sbjct: 117 MNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCW 176
Query: 489 ----NGLGED-----AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
NG ED A+ +F++ + +G+K D + AC+ LG + G + K
Sbjct: 177 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 236
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ I + ++VDM G ++ A+ ++MP E DV W L+
Sbjct: 237 E-KIEVDVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALI 281
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 248/423 (58%), Gaps = 13/423 (3%)
Query: 360 CKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA 419
C D+ E +S + + G + G+ EA+++ ++ + +S D T + ++
Sbjct: 162 CVMFDEMPEPDSASWST----MVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGV 217
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
CGD AL+ K VH ++++ + V ++ MYS+C S+D+A VF M ERD+T+W
Sbjct: 218 CGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAW 277
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
TMI G+A +G GE A+ +F K++ P+ F V SACS G V +G FE+M
Sbjct: 278 STMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWT 337
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+Y I P +KHY +VD+ G + A +FI+ MP+EP+V +W L+ C+ HG +LG+
Sbjct: 338 EYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGE 397
Query: 600 RCAEIVEQLDPSR-----LNEKSKAGL----VPVNASELAKEKENKKLASQNLLEVRSKV 650
+ + +LDPS L A L L K+K KK + +E+ V
Sbjct: 398 HISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMV 457
Query: 651 HEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLA 710
H++ GD SHPE +KIY ++ + ++K+ G++ T VLHDID+E KE AL HSERLA
Sbjct: 458 HKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLA 517
Query: 711 VSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCR 770
+++GLL +P +PIRI+KNLRVC DCH +K+IS++ RE+I+RD RFHHF++ CSC
Sbjct: 518 IAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCN 577
Query: 771 DYW 773
DYW
Sbjct: 578 DYW 580
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
IS + TF +++AC L E + +H + ++ NG++K+Y+ C MD A
Sbjct: 103 ISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYAC 162
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M E D SW TM++G+A+NG +A+ +F + + + D V C LG
Sbjct: 163 VMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG 222
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G M K+ G+ + ++V M G LD AL+ + M E DV W +
Sbjct: 223 ALDLGKWVHSYMDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTM 280
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSR 612
+ +HG+ G++ ++ + + S+
Sbjct: 281 IAGYAIHGH---GEKALQLFDAMKRSK 304
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +FS +L W+T+I G++ + A+ ++ G+ P+ F V AC
Sbjct: 60 AHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCK 119
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
L + EG S G+ ++ + + G +D A ++MP EPD W
Sbjct: 120 LLRLCEGQ-ELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPDSASWS 177
Query: 584 KLMN 587
+++
Sbjct: 178 TMVS 181
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/401 (39%), Positives = 242/401 (60%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G V++ +EA+ + ++ + I D T + L+ AC ALE K +H ++++
Sbjct: 260 INGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRI 319
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ V+ ++ MY++C S++ A VF M E+D+ +W +I G A G E+A+ F +
Sbjct: 320 DVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDE 379
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+KPD F+GV +ACS G V EG+ HF SMS YGI P+++HY +VD+LG G
Sbjct: 380 MHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAG 439
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+ EA E I+ MPM PD V L+ CR+HGNLE +R A+ + ++DP S
Sbjct: 440 RIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSN 499
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ + SK EL E+ +K + +EV VHE+ GD+SH ++ +I ++
Sbjct: 500 IYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLED 559
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +++K AGY+P+ VL D+ +E KE L HSE+LA++ GLLS+ PIR++KNLR+
Sbjct: 560 MISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRI 619
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA K+ISK+ RE+I+RD RFHHFKDG CSCR +W
Sbjct: 620 CSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC A+ L K +HE+++ V ++ +Y +C + A +F
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
E++L SW+ MI G ++ E+A+ +F + + G+K D + AC+ LG + G
Sbjct: 249 QEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK 308
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
LH + K I + ++VDM G ++ A++ +MP E DV W L+
Sbjct: 309 WLH--AYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLA 365
Query: 591 MHGNLE 596
M G E
Sbjct: 366 MCGQAE 371
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L ++C ++ E K +H H +L N ++ MYS C + A VF
Sbjct: 87 DRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVF 143
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDV 527
M ++ + SW TMI A+ +AV +F + K +KP++ + V +AC+ D+
Sbjct: 144 DKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDL 203
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 245/408 (60%), Gaps = 19/408 (4%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ + G + G A++ +++Q + ++ +F ++ AC ALEE K VH + +
Sbjct: 759 KMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR 818
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MY++C S+++A VF N TE+++ +W+ MI +A++GL A+D F
Sbjct: 819 KMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFF 878
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+KPD F + SAC+ G V+EG F S+ +G+ P+++HY +V +LG
Sbjct: 879 NCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGR 938
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G EA I +MP PD VWE L+ CR+HGN+ L + A + +LN ++ A
Sbjct: 939 AGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAAN-----NALKLNARNPA 993
Query: 620 GLVPV-----------NASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDK 665
V + + +++ + E + K ++ +EV + +HE+ A D SHPET +
Sbjct: 994 VYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAE 1053
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY ++ L +M+ AGY P+T++VLH++D+E +E +L HSERLA+++GLL +P PIR
Sbjct: 1054 IYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIR 1113
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I KNLR+CGDCH+A K ISK+VGRE+I RD+ RFH FK+G CSC D+W
Sbjct: 1114 IFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 4/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +G+ ++A E+ ++ TFS +++AC + L+E K V H+
Sbjct: 660 IGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY 719
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N ++ YS+ SM DA VF M RD+ SW+ MI G+A+NGLG A+ Q
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQ 779
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ + F+ + +ACS+ + EG +H E + + + ++ +++ M
Sbjct: 780 MQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRK--MQGDVRVGAALISMYAKC 837
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+EA E + E +V W ++N HG
Sbjct: 838 GSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHG 869
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEA------SRSSQNNGTLEQLDGLVKEGKVKEAIEV 397
SG NG +A+ ++N + EA +R+ + G + G + A ++
Sbjct: 515 SGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKL 574
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
++K+ + D TF+ ++ C + +ALE + +H + L V+ N ++ MY
Sbjct: 575 FLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIR 634
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ DA+ VF ++ R++ SW MI GFA G A ++F Q + G KP F +
Sbjct: 635 CGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSI 694
Query: 518 FSACSALGDVVEG---MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
AC + + EG + H ++ Y + + + +++ +G + +A + +KMP
Sbjct: 695 LKACMSSACLDEGKKVIAHI--LNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMP 750
Query: 575 MEPDVDVWEKLM 586
D+ W K++
Sbjct: 751 -NRDIMSWNKMI 761
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTL---EQ 381
D+ +R ++ NEG + +I+ G + + C +A + + +
Sbjct: 301 DEGKRIHKLAVNEG----LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNAL 356
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L + G +EA E + + ++ T+ ++ AC +KAL + +H H+ +
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY+ C + A +F+ M +RDL SW+ +I G+A+ +A+ ++ Q
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQ 476
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP F+ + SAC+ +G + E + + GI + ++++M G
Sbjct: 477 MQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 535
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ EA E D+ W ++ HG+ E
Sbjct: 536 SIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYE 569
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+ L+Q C ++L EAK +H + VE + P + N ++ MY +C S+ DA VF
Sbjct: 84 AYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGP-DIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M RD+ SW+++I+ +A+ G + A +F + + AG P +I + +AC + ++ G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+H + + Y P +++ S+++M G
Sbjct: 203 KKIHSKIIEAGYQRDPRVQN--SLLNMYG 229
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ AC LE K +H + N +L MY +C+ + A VFS +
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ S++TM+ +A+ E+ + +F Q G+ PD +I + A + + EG
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++ + G+ ++ ++ M G + A + +E + DV V+ L+
Sbjct: 305 -RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFA-DRDVVVYNALIAALAQ 362
Query: 592 HGNLE 596
HG+ E
Sbjct: 363 HGHYE 367
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 6/202 (2%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLR 444
++ V+E I + G + + I D T+ L+ A L+E K +H+ E L S +R
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T + M+ C + A +RD+ ++ +I A++G E+A + + Q +
Sbjct: 321 VGT--ALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ + ++ V +ACS + G L +S + G ++ S++ M G L
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS-EVGHSSDVQIGNSLISMYARCGDLP 437
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
A E MP + D+ W ++
Sbjct: 438 RARELFNTMP-KRDLISWNAII 458
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/404 (38%), Positives = 241/404 (59%), Gaps = 14/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK G +EAIE+ L++ + I D T + + AC +LE A+ + E++ +
Sbjct: 346 MISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYIS--M 403
Query: 441 SPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S R V ++ Y++C S+D A VF + ++D+ W M+ G+ +G G +++ +
Sbjct: 404 SEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIIL 463
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F +QAG+ P+D F+G+ +AC G V EG F M +DYGI P +HY +VD+LG
Sbjct: 464 FHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLG 522
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
G+LD A F+ MP+EP V VW L++ C++H ++ LG+ AE + LDP
Sbjct: 523 RAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQ 582
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
S L S L +EK K +++E+ K+ ++AGD +HP + +I+
Sbjct: 583 LSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEE 642
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++KEAG++P T VLHD++ E EE L HSERLA+++GL+S+P +RI KN
Sbjct: 643 VEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKN 702
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR C +CH+A+K+ISK+V RE+++RDA RFHHFKDG CSC DYW
Sbjct: 703 LRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G AIE+ ++ C+S D +F +++AC ALE + VH + R V
Sbjct: 150 RHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVF 209
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
NG++ +Y++C + A +VF + +R + SW ++I+G+A+NG +A+ IFS+ ++
Sbjct: 210 VQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269
Query: 507 LKPDDQIFIGVFSACSALGDVVEG------------------MLHFESMSKDYGIV---- 544
++PD + V A + + D+ G ++ S+ G V
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVAR 329
Query: 545 --------PSMKHYVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHG 593
PS+ + +++ GY +EA+E M + PD + C G
Sbjct: 330 LFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389
Query: 594 NLELG 598
+LEL
Sbjct: 390 SLELA 394
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA+ + + K + D +++A D + LE K++H V ++
Sbjct: 246 ISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGL 305
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +Y++C + A F+ + L W+ MI+G+ KNG E+A+++F
Sbjct: 306 ECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRL 365
Query: 502 FKQAGLKPDDQIFIGVFSACSALG--DVVEGMLHFESMS--KDYGIVPSMKHYVSIVDML 557
K ++PD +AC+ +G ++ M + SMS ++ IV + S++D
Sbjct: 366 MKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT-----SLIDTY 420
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D A +++P + DV VW +M +HG
Sbjct: 421 AKCGSVDMARFVFDRIP-DKDVVVWSAMMVGYGLHG 455
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 240/402 (59%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V++ +EA+ + ++ + D T + L+ AC ALE K +H ++E+
Sbjct: 310 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEK 369
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V+ ++ MY++C S++ A VF M E+D+ +W +I G A G G A+++F
Sbjct: 370 IEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 429
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + +KPD F+GV +ACS G V EG+ +F SM YGI PS++HY +VDMLG
Sbjct: 430 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 489
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G + EA + I+ MPM PD V L++ CR+HGNL + +R A+ + +LDP S
Sbjct: 490 GRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 549
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ K EL E+ KK + +EV VHE+ GD SHP++ +IY +
Sbjct: 550 NIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLD 609
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K AGY+P+ VL D+D++ KE L HSE+LA++ GLLS+ PIR++KNLR
Sbjct: 610 DMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLR 669
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHSA+K IS++ RE+I+RD RFHHF G CSCRD+W
Sbjct: 670 VCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI++ +E + + T ++ AC ++ LE AK VH++++ + ++
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+Y +C A +F+ M E++L W+ MI G ++ E+A+ +F++ + +G+K D
Sbjct: 281 DVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKV 340
Query: 513 IFIGVFSACSALGDVVEG-MLHF----ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ AC+ LG + G LH E + D + ++VDM G ++ A+
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL------GTALVDMYAKCGSIESAM 394
Query: 568 EFIEKMPMEPDVDVWEKLM 586
++MP E DV W L+
Sbjct: 395 RVFQEMP-EKDVMTWTALI 412
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++AI L+ Q + D TF L ++CG L E K +H H +L N +
Sbjct: 122 RQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTL 178
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MYS C + A VF M + + SW TMI +A+ L +A+ +F + + A +KP++
Sbjct: 179 MNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNE 238
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ V +AC+ D +E + GI +++D+ G A +
Sbjct: 239 ITLVNVLTACARSRD-LETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFN 297
Query: 572 KMPMEPDVDVWEKLMN 587
KMP E ++ W ++N
Sbjct: 298 KMP-EKNLFCWNIMIN 312
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 237/402 (58%), Gaps = 10/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K G EA+ + + + I D T + AC +L+ AK + +++ +
Sbjct: 342 MISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTE 401
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ M+++C S+D A VF ++D+ W MI G+ +G G+DA+D+F
Sbjct: 402 YRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFY 461
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
KQAG+ P+D F+G+ +AC+ G V EG F SM K YGI +HY +VD+LG +
Sbjct: 462 AMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRS 520
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G+L+EA +FI MP+EP V VW L+ C+++ ++ LG+ AE + LDP S
Sbjct: 521 GHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLS 580
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L S+ L +EK K +L+E+ K+ +R GD SHP +I+ +
Sbjct: 581 NLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELE 640
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++KEAG+IP VLHD++QE KEE L HSERLA+++GL+S+ +RI KNLR
Sbjct: 641 SLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLR 700
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C +CHSA K+ISK+V RE+++RDA RFHHFK+G+CSCRDYW
Sbjct: 701 ACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 18/255 (7%)
Query: 344 SGNIQNGMMASQVLNNC----------KHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKE 393
SG +++G + ++ +N K D+F E S N + G +
Sbjct: 97 SGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWN----AIIRGYSSHNFFGD 152
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
AIE+ ++ ++ D T +++AC LE K VH + RL V NG++
Sbjct: 153 AIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVA 212
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y++C ++ A VF + +R++ SW +MI+G+ +NGL +A+ IF Q +Q +KPD
Sbjct: 213 LYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIA 272
Query: 514 FIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ V A + + D+ +G +H + P + +S+ M G + A F ++
Sbjct: 273 LVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL--LISLTAMYAKCGQVMVARSFFDQ 330
Query: 573 MPMEPDVDVWEKLMN 587
M + P+V +W +++
Sbjct: 331 MEI-PNVMMWNAMIS 344
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 39/266 (14%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD------------GLVKEGKVKEA 394
+QNG++A +A+ R Q E LD G + G EA
Sbjct: 206 VQNGLVAL-----------YAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEA 254
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ + G + ++ + D +++A D + LE+ K++H V ++ + M
Sbjct: 255 LRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAM 314
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y++C + A S F M ++ W+ MI+G+AKNG +AV +F + ++ D
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY-------VSIVDMLGSTGYLDEAL 567
AC+ +G + ++K G + Y +++DM G +D A
Sbjct: 375 RSAILACAQVGSL--------DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAR 426
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
E ++ ++ DV VW ++ +HG
Sbjct: 427 EVFDR-TLDKDVVVWSAMIVGYGLHG 451
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 240/402 (59%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK EAI++ LE + + + T ++ AC D L+ + VHE+ +
Sbjct: 113 MISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY +C +++A VF M ER + SW MI G A +G E+A+ +FS
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KP+ FIG+ ACS +G + EG F SM+ DYG++P ++HY +VD+
Sbjct: 233 EMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRA 292
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G L+EA EFI MP++P+ VW L+ C++H N++L + + + +LDP S
Sbjct: 293 GLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVIS 352
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ +++ +L K++ KK + + + V VHE+ AGD +HP+ + I +
Sbjct: 353 NIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWD 412
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +MK GY P+T VL D++++ KE+ L HSE+LAV GL+++P PIRIMKNLR
Sbjct: 413 KLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLR 472
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+ALKIIS IV RE+I+RD RFH F+DG CSCRD+W
Sbjct: 473 VCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 33/219 (15%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T S +++AC + K +H ++L + N IL +Y C M DA +F
Sbjct: 9 DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLF 68
Query: 469 SNMTERD-------------------------------LTSWDTMITGFAKNGLGEDAVD 497
M +RD + SW +MI+GF + G +A+D
Sbjct: 69 EKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAID 128
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + + ++P++ + V +AC+ LGD+ G + E +K G ++ +++DM
Sbjct: 129 LFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRNVHVCNTLIDMY 187
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G L+ A +M E V W ++ MHG E
Sbjct: 188 VKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAE 225
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 235/374 (62%), Gaps = 10/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + +++ACGD AL + +HE+VER + N ++ MY+ C ++DA VF
Sbjct: 301 DAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVF 360
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M RD+ SW ++I+ + G G +AV +F++ + +G PD F+ + SACS G +
Sbjct: 361 DRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLN 420
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG +F+ M+ DY I P ++H+ +VD+LG +G +DEA I++MPM+P+ VW L++
Sbjct: 421 EGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSS 480
Query: 589 CRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAG-LVPVNA-SELAKEKENKKLA 639
CR++ N+++G A+ + QL P N +KAG V A L K + +K+
Sbjct: 481 CRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMP 540
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +E+ ++VH + AGDT HP++ +IY + L +MKE GY+P+T LHD+++E KE
Sbjct: 541 GISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKE 600
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
L HSE+LA+ +L++ +PIRI KNLRVCGDCH A K+ISKIV RE++IRD RF
Sbjct: 601 CHLAVHSEKLAIVFAILNT-QESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRF 659
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG+CSC DYW
Sbjct: 660 HHFKDGICSCGDYW 673
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC + L +H V ++ L + NG++ +Y +C + +A V M
Sbjct: 135 TYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM 194
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ SW++M+ G+A+N +DA+DI + KPD + A + E +
Sbjct: 195 QSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS--ENV 252
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM---PMEPDVDVWEKLMNL 588
L+ E M + S+ + ++ + ++++ +M +EPD ++
Sbjct: 253 LYVEEMFMNLE-KKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRA 311
Query: 589 CRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
C L LG R E VE +L P+ L E S
Sbjct: 312 CGDLSALLLGRRIHEYVERKKLCPNMLLENS 342
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 27/198 (13%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +VF + ER++ ++ MI + N L +DA+ +F G PD + V ACS
Sbjct: 86 ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145
Query: 524 LGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
++ G+ LH + + + +V ++ + G G L EA +++M DV
Sbjct: 146 SDNLRIGLQLH----GAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM-QSKDVV 200
Query: 581 VWEKL-------------MNLCR-MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
W + +++CR M G + D C + L P+ N S+ L
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACT--MASLLPAVTNTSSENVLY---V 255
Query: 627 SELAKEKENKKLASQNLL 644
E+ E K L S N++
Sbjct: 256 EEMFMNLEKKSLVSWNVM 273
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 241/402 (59%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +EA+ + L++++ + V+ + ++ AC AL++ + H ++ER
Sbjct: 214 MISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNK 273
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ ++ MY++C +M+ A VF M E+++ +W + I G A NG GE +++FS
Sbjct: 274 LRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFS 333
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
KQ ++P++ F+ V CS +G V EG HFESMSK YGI P ++HY +VD+ G
Sbjct: 334 LMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRA 393
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G+LDEAL FI MP+ P V W L+N C+++ N+E+G+ + + +L+ S
Sbjct: 394 GHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLS 453
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ SK N + K +K +++EV +VHE+ GD SHP +I ++
Sbjct: 454 NIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLG 513
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K +GY+ T V DI++E KE+AL HSE++A++ GL+S PIRI+KNLR
Sbjct: 514 EISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLR 573
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH A K+ISK RE+++RD RFHHF+DG CSC+ YW
Sbjct: 574 VCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 454 MYSECDSMDD---AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
M S C M D A +F M+ +D +W+ MI+G+ + G +A+ +F+ ++ G+K +
Sbjct: 183 MVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVN 242
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + V SACS LG + +G + ++ + ++ +++DM G +++A+E
Sbjct: 243 EVSMVSVLSACSHLGALDQGRWAHAYIERN-KLRMTLTLGTALIDMYAKCGNMNKAMEVF 301
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
M E +V W + M+G G++C E+
Sbjct: 302 WGMK-EKNVYTWSSAIGGLAMNGA---GEKCLEL 331
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 234/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ + G+ A+++L + + V+ T + AC AL + K +H+ + R
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 631
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY C S+ + +F M +RDL SW+ MI+ + +G G DAV++F Q
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 691
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
F+ GLKP+ F + SACS G + EG +F+ M +Y + P+++ Y +VD+L G
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
+E LEFIEKMP EP+ VW L+ CR+H N +L + A + +L+P N
Sbjct: 752 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMAN 811
Query: 615 EKSKAGLVPVNASE--LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG A L KE+ K + +EV+ K+H + GDTSHP ++I A +
Sbjct: 812 IYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 871
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +KE GY+P+T FVL D+D++ KE +L HSE++A++ GL+S+ A P+RI+KNLRV
Sbjct: 872 LYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRV 931
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA K ISK+ R++I+RD RFHHF DG+CSC DYW
Sbjct: 932 CGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G K A+E + + + T S + ACG + L+ K +H +V R
Sbjct: 471 VTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI 530
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + ++ MYS CDS++ A SVFS ++ RD+ W+++I+ A++G +A+D+ +
Sbjct: 531 ELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 590
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++ + + ACS L + +G G+ S++DM G G
Sbjct: 591 MNLSNVEVNTVTMVSALPACSKLAALRQGK-EIHQFIIRCGLDTCNFILNSLIDMYGRCG 649
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ ++ + MP + D+ W ++++ MHG
Sbjct: 650 SIQKSRRIFDLMP-QRDLVSWNVMISVYGMHG 680
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 376 NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
+E GL G +E I++ L+ + + D F ++ +AC + K K V+++
Sbjct: 159 TAIMEMYCGL---GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 215
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
+ + IL M+ +C MD A F + +D+ W+ M++G+ G + A
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ S K +G+KPD + + S + G E +F M P++ + +++
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIA 335
Query: 556 MLGSTGYLDEALEFIEKMPME 576
GY EAL KM +E
Sbjct: 336 GSEQNGYDFEALSVFRKMVLE 356
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 26/194 (13%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSM 461
+CI + ++ ++Q C L VH + +++ + V + G +L++Y + +
Sbjct: 87 ECIEI----YASILQKCRKLYNLRLGFQVHAQL--VVNGVDVCEFLGSRLLEVYCQTGCV 140
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+DA +F M+ER++ SW ++ + G E+ + +F G++PD +F VF AC
Sbjct: 141 EDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKAC 200
Query: 522 SAL------GDVVEGMLH--FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
S L DV + ML FE S G SI+DM G +D A F E++
Sbjct: 201 SELKNYRVGKDVYDYMLSIGFEGNSCVKG---------SILDMFIKCGRMDIARRFFEEI 251
Query: 574 PMEPDVDVWEKLMN 587
+ DV +W +++
Sbjct: 252 EFK-DVFMWNIMVS 264
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH---VERLLSPLRVSTYN 449
EA+ V + + + + T + + AC + L + +H + VE L S L V N
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG--N 402
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ Y++C S++ A F + + DL SW+ M+ G+A G E+A+++ S+ K G++P
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESM 537
D + G+ + + GD + F+ M
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM----TERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++N +L Y+ S ++A + S M E D+ +W+ ++TGF + G G+ A++ F
Sbjct: 429 LVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQ 488
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ G+ P+ G +AC LG + G + + G+ ++ +
Sbjct: 489 RMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL------IS 542
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M L+ A ++ DV VW +++ C G
Sbjct: 543 MYSGCDSLEVACSVFSELSTR-DVVVWNSIISACAQSG 579
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 241/405 (59%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G +EA+ + + I D + ++ AC + LE K VH + +
Sbjct: 40 VTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGL 99
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ MY++C ++DA VF +M +D+ +W +I G+A+NG G ++++ ++
Sbjct: 100 GSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNB 159
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G+KPD FIG+ ACS G V G +F+SM + YGI P +HY ++D+LG +G
Sbjct: 160 MIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSG 219
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EA E + +M ++PD VW+ L+ CR+HGN+ELG+R A + +L+P N
Sbjct: 220 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSN 279
Query: 615 EKSKAGLVPVNASELAKEKENKKL------ASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S AG E AK + KL + +E+ SKVH + + D SHP T +IY+
Sbjct: 280 LYSAAG----KWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYS 335
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ + +KEAGY+P+ F LHD+D+EGKE L HSE+LAV+ GLL+ P APIRI K
Sbjct: 336 KVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFK 395
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+CGDCH+A+K +S + R +I+RD+ FHHF++G CSC DYW
Sbjct: 396 NLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++ D AF VF MT++D+ SW +++TG NG E+A+ +F + + G+
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD + V SAC+ L V+E + G+ S+ S+V M G +++A +
Sbjct: 66 PDQIVIAAVLSACAEL-TVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANK 124
Query: 569 FIEKMPMEPDVDVWEKLM 586
+ M ++ DV W L+
Sbjct: 125 VFDSMEIQ-DVITWTALI 141
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/402 (39%), Positives = 232/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + +A+E+ +L+ Q + + ++ +C ALE + H++V +
Sbjct: 222 MISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNG 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ MY+ C S+D A VF ++ ERD SW +I G A +G E ++ F+
Sbjct: 282 MTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFA 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+AGL P D F V SACS G V G FESM +D+ + P ++HY +VD+LG
Sbjct: 342 TMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRA 401
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EA F+ KMP++P+ VW L+ CR+H N E+G+R +I+ QL P
Sbjct: 402 GKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLS 461
Query: 621 LVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA E + K K KK +L+E+ +VH++ GD+SHPE DKI +
Sbjct: 462 NIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWE 521
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++ AGY T L DID+E KE AL HSE+LA++ G++ S A PIRI+KNLR
Sbjct: 522 EILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLR 581
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A K+ISK+ GRELI+RD RFHHF+ GLCSC DYW
Sbjct: 582 VCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ +++ +++C ++ A +F M E++L +W TMI+G+A+N + AV++F +
Sbjct: 185 VVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQS 244
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G++ ++ + + V S+C+ LG + G + + K+ G+ ++ ++VDM G +D
Sbjct: 245 QGVRANETVMVSVISSCAHLGALELGERAHDYVVKN-GMTLNLILGTALVDMYARCGSID 303
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A+ E +P E D W L+ MHG
Sbjct: 304 KAVWVFEDLP-ERDTLSWTALIAGLAMHG 331
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 264/464 (56%), Gaps = 20/464 (4%)
Query: 326 QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDD--FAEASRSSQNNGTLEQL- 382
Q+ Q QQ + YS ++ G + C D A +++N + L
Sbjct: 530 QALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALI 589
Query: 383 DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G + G +EA++V + + + +L TF + A + +++ K +H + +
Sbjct: 590 SGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYD 649
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ +YS+C S++DA F M E+++ SW+ MITG++++G G +AV +F +
Sbjct: 650 SETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 709
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
KQ GL P+ F+GV SACS +G V EG+ +F SMSK++G+VP +HYV +VD+LG
Sbjct: 710 KQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAAL 769
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
L A EFIE+MP+EPD +W L++ C +H N+E+G+ A + +L+P E S ++
Sbjct: 770 LCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEP----EDSATYVL 825
Query: 623 PVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N ++ K++ KK ++ +EV++ +H + GD HP ++IY
Sbjct: 826 LSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEY 885
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
I L + E GY+ + +L+D++QE K+ HSE+LAV+ GLLS PIR++KN
Sbjct: 886 IDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKN 945
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+ +K +SKI R +++RDA RFHHF+ G+CSC+DYW
Sbjct: 946 LRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 48/274 (17%)
Query: 355 QVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
+V N K DD ++ S N + + GL+ + + + + L+ + ++ D TF+
Sbjct: 60 EVDNAIKLFDDIPSSNVSFWN----KVISGLLAKKLASQVLGLFSLMITENVTPDESTFA 115
Query: 415 QLMQACGDAKALEE------AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
+++AC KA + AK +H SPL N ++ +YS+ +D A VF
Sbjct: 116 SVLRACSGGKAPFQVTEQIHAKIIHHGFGS--SPL---VCNPLIDLYSKNGHVDLAKLVF 170
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----A 523
+ +D SW MI+G ++NG ++A+ +F Q ++ + P +F V SAC+
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFK 230
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMK-------------------------HYVSIVDMLG 558
LG+ + G + +S + + ++ Y S++ L
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 559 STGYLDEALEFIEKMP---MEPDVDVWEKLMNLC 589
G+ D AL+ EKM M+PD L++ C
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + EA+++ +E Q I D FS + AC +AL + + +H
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ +Y+ C DA+ F + +D SW+ +I+GFA++G E+A+ +FS
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS 606
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q QAG++ + F SA + ++ +G +M G + ++ +
Sbjct: 607 QMNQAGVEANLFTFGSAVSATANTANIKQGK-QIHAMMIKTGYDSETEASNVLITLYSKC 665
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +++A +MP E +V W ++ HG
Sbjct: 666 GSIEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 35/256 (13%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + GL + G+ EAI + + K + FS ++ AC + + + +H + +
Sbjct: 182 VAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK 241
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
N ++ +YS ++ A +FS M RD S++++I+G A+ G + A+ +
Sbjct: 242 WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQL 301
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGD--------------------VVEGMLHFESMS 538
F + + +KPD + SAC+++G ++EG L +
Sbjct: 302 FEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL-LDLYV 360
Query: 539 KDYGIVPSMKHYVS-----------IVDMLGSTGYLDEALEFIEKMPME---PDVDVWEK 584
K + I + +++++ ++ G G L E+ +M +E P+ +
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420
Query: 585 LMNLCRMHGNLELGDR 600
++ C G L+LG++
Sbjct: 421 ILRTCTSLGALDLGEQ 436
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++ C AL+ + +H V + V + ++ MY++ +D A + +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
E D+ SW MI G+ ++ L +A+ +F + + G++ D+ F SAC+ + + +G
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H +S Y S+ + ++V + G +A EK+ + ++ W L++
Sbjct: 537 QIHAQSYISGYSEDLSIGN--ALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALIS 590
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG-------ILK 453
+E++ I ++ T+ L + C ++ +L +AK +H + + S ++G ++
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFK-------SGFDGEDVLGSRLID 53
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y +D+A +F ++ +++ W+ +I+G L + +FS + PD+
Sbjct: 54 IYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDEST 113
Query: 514 FIGVFSACS---ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F V ACS A V E +H + + +G P + + ++D+ G++D A
Sbjct: 114 FASVLRACSGGKAPFQVTE-QIHAKIIHHGFGSSPLVCN--PLIDLYSKNGHVDLAKLVF 170
Query: 571 EKMPMEPDVDVW--------------EKLMNLCRMH 592
E++ ++ V W E ++ C+MH
Sbjct: 171 ERLFLKDSVS-WVAMISGLSQNGREDEAILLFCQMH 205
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 228/375 (60%), Gaps = 17/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ C A AL+ K VH ++++ + ++ MY++C ++ A +F
Sbjct: 361 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 420
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ W+ +ITGFA +G GE+A+DIF++ ++ G+KP+D FIG+ ACS G V EG
Sbjct: 421 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 480
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
FE M +G+VP ++HY +VD+LG G LDEA E I+ MP++P+ VW L+ CR+
Sbjct: 481 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 540
Query: 592 HGNLELGDRCAEIVEQLDP-------------SRLNEKSKAGLVPVNASELAKEKENKKL 638
H N +LG+ A + +++P + N S A V + +KE
Sbjct: 541 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE---- 596
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+++EV VHE+ GD SHP+ +I ++ +R ++ EAGY+P+T VL +ID+E K
Sbjct: 597 PGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEK 656
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ PIRI+KNLRVC DCH+A K++SKI GR +I+RD R
Sbjct: 657 ETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNR 716
Query: 759 FHHFKDGLCSCRDYW 773
FHHF++G CSC DYW
Sbjct: 717 FHHFREGYCSCGDYW 731
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 10/215 (4%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K + + A+ V L K VD +++ACG + K +H V + V
Sbjct: 101 KRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVF 160
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY EC ++ A VF M ERD+ SW TMI ++N + A+++ +
Sbjct: 161 VGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ 220
Query: 507 LKPDDQIFIGVF-----SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++P + + + +A +G + + S ++ G VP+ +++DM G
Sbjct: 221 VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG-VPTT---TALLDMYAKCG 276
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+L A + + + V W ++ C LE
Sbjct: 277 HLGLARQLFNGLTQKTVVS-WTAMIAGCIRSNRLE 310
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 37/207 (17%)
Query: 421 GDAKALEEAKAVHEHVERLLS--PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
D + KA+H +V R + + V T +L MY++C + A +F+ +T++ + S
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 479 WDTMITG-------------------------------FAKNGLGEDAVDIFSQFKQAGL 507
W MI G +A+ + A ++F Q + +G+
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 355
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA- 566
+P + + S C+ G + G + K+ V + + ++VDM G ++ A
Sbjct: 356 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN-TALVDMYAKCGDINAAG 414
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
FIE + D+ +W ++ MHG
Sbjct: 415 RLFIEA--ISRDICMWNAIITGFAMHG 439
>gi|388511541|gb|AFK43832.1| unknown [Lotus japonicus]
Length = 295
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 215/313 (68%), Gaps = 18/313 (5%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
M DA VF +M+ +++ SW M+ G+A + +G+DA+ +F Q + GL+ + + V SA
Sbjct: 1 MIDARRVFDHMSSKNVESWHLMLRGYANSTMGDDALRLFEQMNELGLEITSETLLAVLSA 60
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C + V + LHF+SM YGI P ++HY+ ++D+LG +GYL EA EFIEK+P EP +
Sbjct: 61 CGSAEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEKLPFEPTLT 120
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLAS 640
VWE L N R+HG+++L D E++ LDPS K+ A +P KK
Sbjct: 121 VWETLKNYARIHGDIDLEDHVEELMVNLDPS----KAVANKIPTPPP--------KKYNH 168
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
++L+ R+++ EY+ + + + +K+ ALI MK+AGY+P+TR+VLHDIDQE K +
Sbjct: 169 ISMLDGRNRIIEYK-NPSLYKDDEKLKALI-----GMKDAGYVPDTRYVLHDIDQEAKGQ 222
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
ALL HSERLA+++GL+S+P R P+RI+KNLRVCGDCH+A+KI+S+IVGRELI+RD KRFH
Sbjct: 223 ALLYHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFH 282
Query: 761 HFKDGLCSCRDYW 773
HFKDG CSC DYW
Sbjct: 283 HFKDGKCSCGDYW 295
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 228/375 (60%), Gaps = 17/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ C A AL+ K VH ++++ + ++ MY++C ++ A +F
Sbjct: 401 TIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEA 460
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ W+ +ITGFA +G GE+A+DIF++ ++ G+KP+D FIG+ ACS G V EG
Sbjct: 461 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 520
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
FE M +G+VP ++HY +VD+LG G LDEA E I+ MP++P+ VW L+ CR+
Sbjct: 521 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580
Query: 592 HGNLELGDRCAEIVEQLDP-------------SRLNEKSKAGLVPVNASELAKEKENKKL 638
H N +LG+ A + +++P + N S A V + +KE
Sbjct: 581 HKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE---- 636
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+++EV VHE+ GD SHP+ +I ++ +R ++ EAGY+P+T VL +ID+E K
Sbjct: 637 PGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEK 696
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ PIRI+KNLRVC DCH+A K++SKI GR +I+RD R
Sbjct: 697 ETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNR 756
Query: 759 FHHFKDGLCSCRDYW 773
FHHF++G CSC DYW
Sbjct: 757 FHHFREGYCSCGDYW 771
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ +++E ++ ++++ I + T L+ CG AL+ K +H ++ R
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ ++ MY +C + +A ++F + RD+ W M++ +A+ + A ++F
Sbjct: 329 FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFD 388
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + +G++P + + S C+ G + G + K+ V + + ++VDM
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN-TALVDMYAKC 447
Query: 561 GYLDEALE-FIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A FIE + D+ +W ++ MHG
Sbjct: 448 GDINAAGRLFIE--AISRDICMWNAIITGFAMHG 479
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++ACG + K +H V + V N ++ MY EC ++ A VF M ERD
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF-----SACSALGDVVEG 530
+ SW TMI ++N + A+++ + ++P + + + +A +G +
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ S ++ G VP+ +++DM G+L A + + + V W ++ C
Sbjct: 220 YVIRNSNNEHMG-VPTT---TALLDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCI 274
Query: 591 MHGNLELGDR 600
LE G +
Sbjct: 275 RSNRLEEGTK 284
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 421 GDAKALEEAKAVHEHVERLLS--PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
D + KA+H +V R + + V T +L MY++C + A +F+ +T++ + S
Sbjct: 206 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 265
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESM 537
W MI G ++ E+ +F + ++ + P++ + + C G + G LH +
Sbjct: 266 WTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYIL 325
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ + S+ ++VDM G + A + DV +W +++
Sbjct: 326 RNGFSV--SLALATALVDMYGKCSDIRNARALFDS-TQNRDVMIWTAMLS 372
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 244/432 (56%), Gaps = 22/432 (5%)
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKE----GKVKEAIEVLGLLEKQCISVDLPTFS 414
C H +D AE G L ++ G+ +EA+++ ++ + D S
Sbjct: 480 KCSHVED-AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCS 538
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
L+ AC + A E+ K +H H+ + L + N ++ MY++C S+DDA FS +TER
Sbjct: 539 SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER 598
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
+ SW MI G A++G G A+ +F+Q + G+ P+ + V AC+ G V E L+F
Sbjct: 599 GIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYF 658
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
ESM + +G P +HY ++D+LG G ++EA+E + KMP E + VW L+ R+H +
Sbjct: 659 ESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKD 718
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVN-------------ASELAKEKENKKLASQ 641
+ELG R AE++ L+P EKS ++ N L ++ + KK
Sbjct: 719 VELGRRAAEMLFILEP----EKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGM 774
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +EV+ KV+ + GD SH + +IYA + L M +AGY+P LHD++Q KE
Sbjct: 775 SWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELL 834
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LAV+ GL+++P APIR+ KNLRVC DCH+A K I KIV RE+I+RD RFHH
Sbjct: 835 LYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHH 894
Query: 762 FKDGLCSCRDYW 773
FKDG CSC DYW
Sbjct: 895 FKDGSCSCGDYW 906
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 24/267 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS +++AC K L K VH V V N ++ MY++CD D+ +F +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ER++ SW+ + + + + +AV +F + +G+KP++ + +AC+ L D G
Sbjct: 219 PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++H + Y P + ++VDM G L +A+ EK+ +PD+ W ++ C
Sbjct: 279 IIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCV 335
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSK- 649
+H E ++ E++ Q+ +++S + + E+ S L+++ SK
Sbjct: 336 LH---EHHEQALELLGQMKRQ------------LHSSLMKMDMESDLFVSVGLVDMYSKC 380
Query: 650 --VHEYRAGDTSHPETDKIY--ALIRG 672
+ + R PE D I A+I G
Sbjct: 381 DLLEDARMAFNLLPEKDLIAWNAIISG 407
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L L++K + ++S+L+ C K+L +H H+ + S N ++ +YS
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYS 102
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C A + +E DL SW +I+G+A+NGLG A+ F + G+K ++ F
Sbjct: 103 KCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 517 VFSACSALGDV 527
V ACS + D+
Sbjct: 163 VLKACSIVKDL 173
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + K+ I + T S ++++ + + + VH + + N ++
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 475
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
Y +C ++DA +F T DL S+ +MIT +A+ G GE+A+ +F + + LKPD
Sbjct: 476 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 535
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + +AC+ L +G LH + YG V + S+V+M G +D+A
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDA 588
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL- 440
+D K G + +AI V +++ D+ +++ ++ C + E+A + ++R L
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQP----DIVSWNAVIAGCVLHEHHEQALELLGQMKRQLH 355
Query: 441 ---------SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
S L VS G++ MYS+CD ++DA F+ + E+DL +W+ +I+G+++
Sbjct: 356 SSLMKMDMESDLFVSV--GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 413
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
+A+ +F + + G+ + + + + L VV +S G +
Sbjct: 414 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL-QVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 552 SIVDMLGSTGYLDEALEFIEK 572
S++D G ++++A E+
Sbjct: 473 SLIDSYGKCSHVEDAERIFEE 493
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 244/432 (56%), Gaps = 22/432 (5%)
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKE----GKVKEAIEVLGLLEKQCISVDLPTFS 414
C H +D AE G L ++ G+ +EA+++ ++ + D S
Sbjct: 507 KCSHVED-AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCS 565
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
L+ AC + A E+ K +H H+ + L + N ++ MY++C S+DDA FS +TER
Sbjct: 566 SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER 625
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
+ SW MI G A++G G A+ +F+Q + G+ P+ + V AC+ G V E L+F
Sbjct: 626 GIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYF 685
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
ESM + +G P +HY ++D+LG G ++EA+E + KMP E + VW L+ R+H +
Sbjct: 686 ESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKD 745
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVN-------------ASELAKEKENKKLASQ 641
+ELG R AE++ L+P EKS ++ N L ++ + KK
Sbjct: 746 VELGRRAAEMLFILEP----EKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGM 801
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +EV+ KV+ + GD SH + +IYA + L M +AGY+P LHD++Q KE
Sbjct: 802 SWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELL 861
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LAV+ GL+++P APIR+ KNLRVC DCH+A K I KIV RE+I+RD RFHH
Sbjct: 862 LYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHH 921
Query: 762 FKDGLCSCRDYW 773
FKDG CSC DYW
Sbjct: 922 FKDGSCSCGDYW 933
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS +++AC K L K VH V V N ++ MY++CD D+ +F +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ER++ SW+ + + + + +AV +F + +G+KP++ + +AC+ L D G
Sbjct: 219 PERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++H + Y P + ++VDM G L +A+ EK+ +PD+ W ++ C
Sbjct: 279 IIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCV 335
Query: 591 MH 592
+H
Sbjct: 336 LH 337
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L L++K + ++S+L+ C K+L +H H+ + S N ++ +YS
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYS 102
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C + A + +E DL SW +I+G+A+NGLG A+ F + G+K ++ F
Sbjct: 103 KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 517 VFSACSALGDVVEG 530
V ACS + D+ G
Sbjct: 163 VLKACSIVKDLRIG 176
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + K+ I + T S ++++ + + + VH + + N ++
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 502
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
Y +C ++DA +F T DL S+ +MIT +A+ G GE+A+ +F + + LKPD
Sbjct: 503 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 562
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ + +AC+ L +G LH + YG V + S+V+M G +D+A
Sbjct: 563 VCSSLLNACANLSAFEQGKQLHVHILK--YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 620
Query: 572 KMPMEPDVDVWEKLMNLCRMHGN 594
++ E + W ++ HG+
Sbjct: 621 ELT-ERGIVSWSAMIGGLAQHGH 642
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E +GL + +S P + S ++ AC + K +H ++ +L + N ++
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++ + DA SVF + + D+ SW+ +I G + E A+++ Q K++G+ P+
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIF 360
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
AC+ +G G LH M D + + V +VDM L++A
Sbjct: 361 TLSSALKACAGMGLKELGRQLHSSLMKMD--MESDLFVSVGLVDMYSKCDLLEDARMAFN 418
Query: 572 KMPMEPDVDVWEKLMN 587
+P E D+ W +++
Sbjct: 419 LLP-EKDLIAWNAIIS 433
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYN 449
++A+E+LG +++ I ++ T S ++AC E + +H + ++ S L VS
Sbjct: 341 EQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSV-- 398
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
G++ MYS+CD ++DA F+ + E+DL +W+ +I+G+++ +A+ +F + + G+
Sbjct: 399 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 458
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ + + + L VV +S G + S++D G ++++A
Sbjct: 459 NQTTLSTILKSTAGL-QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 570 IEK 572
E+
Sbjct: 518 FEE 520
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 251/431 (58%), Gaps = 19/431 (4%)
Query: 352 MASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
+A +V N D F+ +S + K + K+A+E+ + C++ D
Sbjct: 155 LAREVFNGMDDRDAFSWSS----------MMSAYTKGRRSKDALELWREMRAACVNPDCT 204
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC D AL VH+ VE L V ++ MY++C ++++ VF +M
Sbjct: 205 TMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSM 264
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ +W +MI G A +G G DA+ +FS+ GL+P++ FIGV +C+ LG V +G
Sbjct: 265 PVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGK 324
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SMS +G+ P ++HY +VD+LG +G+++EA + I MP EPD +W L+ CR+
Sbjct: 325 KYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRI 384
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
+ N+E+ + + LDP S + ++ + + + +++ ++
Sbjct: 385 YKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRS 444
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E ++ +HE+ +GD SHP + +IY ++ + ++++AGY P T VL DID++ KE AL
Sbjct: 445 SIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERAL 504
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LAV+ GLL++PA + +RI KNLR C DCHSA+K+I+ + R+LIIRD RFHHF
Sbjct: 505 AEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHF 564
Query: 763 KDGLCSCRDYW 773
+G CSC+DYW
Sbjct: 565 SEGRCSCKDYW 575
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y+ +D A VF+ M +RD SW +M++ + K +DA++++ + + A
Sbjct: 139 SWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAAC 198
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ PD + V SACS +G + G + G+ +K +++DM G ++ +
Sbjct: 199 VNPDCTTMVSVLSACSDMGALAVGA-EVHQFVESNGVELDVKLGTALIDMYAKCGDIENS 257
Query: 567 LEFIEKMPMEPDVDVWEKLM 586
+ MP++ DV W ++
Sbjct: 258 VRVFHSMPVK-DVLTWSSMI 276
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 241/393 (61%), Gaps = 13/393 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS--TYN 449
+E++++ + ++ D + ++ AC + LE K VH ++ + S LR S YN
Sbjct: 447 EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVH--LDFIKSGLRWSQSVYN 504
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C +DDA ++F +M +D+ +W +I G+A+NG G +++ + +G +P
Sbjct: 505 SLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 564
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D FIG+ ACS G V EG +F+ M+K YGI P +HY ++D+ G +G LDEA +
Sbjct: 565 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 624
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAG 620
+++M ++PD VW+ L++ CR+H NLEL +R A + +L+P S + S+
Sbjct: 625 LDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKW 684
Query: 621 LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
+L K K K + LE+ S+V+ + + D HP +IY I + ++KEA
Sbjct: 685 NDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEA 744
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+ F LHD+D+EGKE L HSE+LAV+ GLL++P APIRI KNLRVCGDCHSA+
Sbjct: 745 GYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAM 804
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K IS++ R +I+RD+ FHHF++G CSC DYW
Sbjct: 805 KYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ G +EA+ + + + + +D TF ++ C K+VH + +
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFEN 397
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ MY++ MD A++VF M E+D+ SW +++TG+A+N E+++ IF +
Sbjct: 398 YKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMR 457
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G+ PD I + SAC+ L + G +H + + G+ S Y S+V M G
Sbjct: 458 VTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGC 515
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
LD+A M ++ DV W ++
Sbjct: 516 LDDADAIFVSMQVK-DVITWTAII 538
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +A+E + Q + + TF ++ AC A + VH + +
Sbjct: 236 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 295
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MY++C + +A ++ M + D+ SW++++ GF ++GL E+A+ +F
Sbjct: 296 FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 355
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV----VEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+K DD F V + C +G + V G++ ++ ++Y +V + ++VDM
Sbjct: 356 NMHGRNMKIDDYTFPSVLNCC-VVGSINPKSVHGLI-IKTGFENYKLVSN-----ALVDM 408
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
TG +D A EKM +E DV W L+
Sbjct: 409 YAKTGDMDCAYTVFEKM-LEKDVISWTSLVT 438
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 146/361 (40%), Gaps = 35/361 (9%)
Query: 311 SFYQQDQNGGQY----QWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQV-LNNCKHEDD 365
S YQ +Q Q Q + +R+ + + P + +Y N M++S V + +
Sbjct: 64 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYS------WNTMISSYVNVGRLVEARE 117
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
+ + + G K G EA ++ + + T +++ C
Sbjct: 118 LFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGL 177
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMI 483
++ + +H V + V G++ MY++C + +A +F + ++ W M+
Sbjct: 178 IQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMV 237
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMS 538
TG+A+NG G AV+ F G++ + F + +ACS++ G+ V G +
Sbjct: 238 TGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFI------ 291
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE-- 596
G ++ ++VDM G L A +E M + DV W LM HG E
Sbjct: 292 VKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRHGLEEEA 350
Query: 597 ------LGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEK--ENKKLASQNLLEVRS 648
+ R +I + PS LN + P + L + EN KL S L+++ +
Sbjct: 351 LRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYA 410
Query: 649 K 649
K
Sbjct: 411 K 411
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 240/391 (61%), Gaps = 11/391 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGI 451
EA+ + +E+ + D T + L+ ACGD AL + +H+++E+ L P + N +
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQP-NLLLENAL 347
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY++C +++A VF M RD+ SW +M++ + ++G G DAV +F++ +G PD
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V SACS G + +G +F M++ YGIVP ++H+ +VD+ G G ++EA FI+
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP- 623
+MPMEP+ VW L++ CR+H +++G A+++ QL P + N +KAG+
Sbjct: 468 QMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKD 527
Query: 624 -VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+N K+ KK+ + +E+ +VH + AGD HP+ IY + L +MKE GY
Sbjct: 528 VMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGY 587
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
IP+T LHD++ E KE L HSE+LA+ +L++ PIRI KNLRVCGDCH A+K+
Sbjct: 588 IPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKL 647
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKIV R +I+RD RFHHF +G+CSC DYW
Sbjct: 648 ISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + ++ + D TF +++AC L VH+ + ++ + N ++
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALV 179
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C + +A V M RD+ SW++M+ G+A++G +DA++I + L D
Sbjct: 180 AMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAG 239
Query: 513 IFIGV--FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ ++L +V FE M+K ++ + ++ + + +EA+
Sbjct: 240 TMASLSPVVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAIYVNNSMPNEAVSLF 294
Query: 571 EKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ--LDPSRLNEKS 617
+M M+PD L+ C L LG R + +E+ L P+ L E +
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENA 346
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ YS A +F E+++ ++ MI + N L +A+ IF PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F V ACS L ++ G+ +++ K G+ ++ ++V M G G L EA + +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVK-VGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK--SKAGLVPV 624
++MP DV W ++ G D EI +++D LN + A L PV
Sbjct: 196 DQMPYR-DVVSWNSMVAGYAQSGQF---DDALEICKEMDSLNLNHDAGTMASLSPV 247
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 240/391 (61%), Gaps = 11/391 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGI 451
EA+ + +E+ + D T + L+ ACGD AL + +H+++E+ L P + N +
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRP-NLLLENAL 347
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY++C +++A VF M RD+ SW +M++ + ++G G DAV +F++ +G PD
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V SACS G + +G +F M++ YGIVP ++H+ +VD+ G G ++EA FI+
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP- 623
+MPMEP+ VW L++ CR+H +++G A+++ QL P + N +KAG+
Sbjct: 468 QMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKD 527
Query: 624 -VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+N K+ KK+ + +E+ +VH + AGD HP+ IY + L +MKE GY
Sbjct: 528 VMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGY 587
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
IP+T LHD++ E KE L HSE+LA+ +L++ PIRI KNLRVCGDCH A+K+
Sbjct: 588 IPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKL 647
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKIV R +I+RD RFHHF +G+CSC DYW
Sbjct: 648 ISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 12/232 (5%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + ++ + D TF +++AC L VH+ + ++ + N ++
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALV 179
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C + +A V M RD+ SW++M+ G+A++G +DA++I + L D
Sbjct: 180 AMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAG 239
Query: 513 IFIGV--FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ ++L +V FE M+K ++ + ++ + + +EA+
Sbjct: 240 TMASLSPVVCYTSLENVQYIHNMFERMTKK-----NLISWNVMIAIYVNNSMPNEAVSLF 294
Query: 571 EKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ--LDPSRLNEKS 617
+M M+PD L+ C L LG R + +E+ L P+ L E +
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENA 346
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ YS A +F E+++ ++ MI + N L +A+ IF PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F V ACS L ++ G+ +++ K G+ ++ ++V M G G L EA + +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVK-VGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK--SKAGLVPV 624
++MP DV W ++ G D EI +++D LN + A L PV
Sbjct: 196 DQMPYR-DVVSWNSMVAGYAQSGQF---DDALEICKEMDSLNLNHDAGTMASLSPV 247
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 240/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ ++ + + + + + + + + ++ C + AL+ K VH+ V +
Sbjct: 234 MIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK-- 291
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
PL T G ++ MYS+C + DA+ +F + +D+ W+ MI+G+A++G G+ A+ +
Sbjct: 292 CPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRL 351
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + K+ GLKPD F+ V AC+ G V G+ +F +M +D+GI +HY +VD+LG
Sbjct: 352 FDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLG 411
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L EA++ I+ MP +P ++ L+ CR+H NL L + A+ + +LDP+ +
Sbjct: 412 RAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQ 471
Query: 619 AGLVPVN-------ASELAKEKENK--KLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
V AS K+N K+ + +E+ S VH +R+ D HPE I+
Sbjct: 472 LANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEK 531
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ L +MK AGY+P+ FVLHD+ +E KE+ LL HSE+LA++ GLL P PIR+ KN
Sbjct: 532 LKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKN 591
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCHSA K IS I GRE+I+RD RFHHFKDG CSCRDYW
Sbjct: 592 LRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 30/223 (13%)
Query: 381 QLDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQ---ACGDAKALEEAKAVHEHV 436
+ L + G + EA + + EK C+S +S ++ ACGD A E
Sbjct: 141 MISALAQVGLMGEARRLFSAMPEKNCVS-----WSAMVSGYVACGDLDAAVECFYA---- 191
Query: 437 ERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
+P+R V T+ ++ Y + ++ A +F M+ R L +W+ MI G+ +NG ED
Sbjct: 192 ----APMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDG 247
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHY 550
+ +F + G+KP+ V CS LG V ++ +S D
Sbjct: 248 LRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD------TTAG 301
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
S+V M G L +A E ++P DV W +++ HG
Sbjct: 302 TSLVSMYSKCGDLKDAWELFIQIP-RKDVVCWNAMISGYAQHG 343
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN-GLGEDAVDIFSQFK 503
V N ++ Y C +D A VF +M + +W++++ FAK G E A +F +
Sbjct: 41 VIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP 100
Query: 504 QAGLKPDDQIFIGVFSACSA--LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
Q + + + AC LG V + F+SM + + + +++ L G
Sbjct: 101 QP-----NTVSYNIMLACHWHHLG-VHDARGFFDSMP-----LKDVASWNTMISALAQVG 149
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
+ EA MP E + W +++ G+L+ C
Sbjct: 150 LMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAAVEC 188
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 250/434 (57%), Gaps = 27/434 (6%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A +V N DD A + + G V+ G+ ++A+ + + D T
Sbjct: 554 ARKVFNQIPSPDDVAWTT----------VISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ L++AC ALE+ K +H ++ +L ++ MY++C +++DA+ +F M
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMN 663
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R + W+ MI G A++G E+A++ F++ K G+ PD FIGV SACS G +
Sbjct: 664 TRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK 723
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+F+SM K YG+ P ++HY +VD L G++ EA + + MP E ++ L+N CR+
Sbjct: 724 NFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQ 783
Query: 593 GNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKEN-------------KKLA 639
G+ E G+R AE + +DPS S A ++ N A + EN KK
Sbjct: 784 GDKETGERVAEKLFTMDPS----DSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEP 839
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +++++KVH + AGD SH ETD IY + + ++KE GY+P+T F L DI++E KE
Sbjct: 840 GFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKE 899
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
AL HSE+LA+++GL+ +P +R++KNLRVCGDCH+A+K IS + RE+++RDA RF
Sbjct: 900 SALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRF 959
Query: 760 HHFKDGLCSCRDYW 773
HHF+ G+CSC DYW
Sbjct: 960 HHFRSGICSCGDYW 973
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +EA+ + L+ ++ D TF+ +A G L++ K +H V ++
Sbjct: 471 MMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMR 530
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +GIL MY +C M A VF+ + D +W T+I+G +NG E A+ +
Sbjct: 531 FHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYH 590
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + AG++PD+ F + ACS L + +G +H M + P + S+VDM
Sbjct: 591 QMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVDMYAK 648
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +++A +M V +W ++ HGN E
Sbjct: 649 CGNIEDAYGLFRRMNTR-SVALWNAMIVGLAQHGNAE 684
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ L ++ G+ EA++ + K + D T+ ++ LE K +H V R
Sbjct: 267 KTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRF 326
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N + MY + S++ A +F M E DL SW+T+I+G A++GL E ++ +F
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++GL PD V ACS+L + + + GIV +++D+
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK 446
Query: 560 TGYLDEA 566
G ++EA
Sbjct: 447 GGKMEEA 453
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K EA + LL + + T S L + C + ++A+ + ++ V
Sbjct: 102 KTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAG 161
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y++ + +A +F M RD+ W+ M+ + + G G++ + +FS F ++GL+P
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 510 D----DQIFIGV 517
D I +GV
Sbjct: 222 DCVSVRTILMGV 233
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 386 VKEGKVKEAIEVL--GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV--HEHVERLLS 441
++E ++ I++L GLL Q T + +++AC +LEE+ V H L +
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQF------TITSVLRACS---SLEESYCVGRQVHTCALKA 428
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + ++ ++ +YS+ M++A +F N DL SW+ M+ GF + +A+ +F
Sbjct: 429 GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF 488
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK-HY-----VSI 553
S + G K D F A L + +G + + +V M+ HY I
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQG-------KQIHAVVIKMRFHYDLFVISGI 541
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+DM G + A + ++P PD W +++ C +G E
Sbjct: 542 LDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEE 583
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 253/406 (62%), Gaps = 16/406 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +A++++ + ++ +D TF+ ++ AC LE VH R
Sbjct: 665 MISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRAC 724
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++C +D A F M R+L SW++MI+G+A++G G ++D+F+
Sbjct: 725 LESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFA 784
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K G PD F+GV SACS G V EG HF+SMS+ YG+ P M+H+ +VD+LG
Sbjct: 785 QMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRV 844
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-NLELGDRCAEIVEQLDPSRLNEKSK 618
G L++ +F+ +MP++P+V +W ++ CR +G N LG R AE++ +++P+ N +
Sbjct: 845 GELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPT--NAVNY 902
Query: 619 AGLVPVNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + AS ++AK + KK A + + ++ VH + AGD SHPE D IY
Sbjct: 903 ILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIY 962
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++ L +M+ AGYIPETRF L+D++ E KEE L HSE++AV+ +L+ P++ PIRI+
Sbjct: 963 EKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRIL 1021
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCHSA K IS+IV R++++RD+ RFHHF++G CSC D+W
Sbjct: 1022 KNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 12/210 (5%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK----AVHEHVER- 438
GLV++ + +EA+E L + K + ++ ++ ++ A + LE K VH + R
Sbjct: 359 GLVRQKRGEEAVE-LFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRS 417
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
LL+ +++ NG++ MY++C +++DA VF M +D +W++MITG +N +AV
Sbjct: 418 GLLNA-QIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVK 476
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
F + ++ L P + I S+C++LG + G LH E + + S+ + +++ +
Sbjct: 477 TFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSN--ALLAL 534
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G GY+ E + M ++ D W L+
Sbjct: 535 YGECGYVKECQKAFSLM-LDYDHVSWNSLI 563
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +C + + +H +L L VS N +L +Y EC + + FS M
Sbjct: 492 TMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM 551
Query: 472 TERDLTSWDTMITGFAKNGLGE-DAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ D SW+++I A + +AV+ F +AG P+ FI + +A S+L
Sbjct: 552 LDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSL 605
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y+ + VF M R+L SW +I+G+ +N + +A ++F + G
Sbjct: 112 NTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFM 171
Query: 509 PDDQIFIGVFSACSALGD 526
P+ F V AC G+
Sbjct: 172 PNHYAFGSVIRACQECGE 189
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 224/374 (59%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ AC L K +H R L VS N I+ +Y+ S+ A VF +
Sbjct: 432 TLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQI 491
Query: 472 TER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R + +W +MI A++GLGE A+ +F + + G+KPD +IGVFSAC+ G + +G
Sbjct: 492 CWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKG 551
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++E M ++GIVP M HY +VD+L G L EA EFI++MP+ PD VW L+ CR
Sbjct: 552 KRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACR 611
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLA 639
+ N +L + AE + +DP N + + L V ++ +L K+K KK
Sbjct: 612 VRKNADLAELAAEKLLSIDPD--NSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKET 669
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ V+SKVH + A D HP+ D I + ++K+AG++P+ VLHD+D E KE
Sbjct: 670 GFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKE 729
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA++ GL+S+P + +RIMKNLRVC DCH+A+K ISK+V RE+I+RDA RF
Sbjct: 730 ELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRF 789
Query: 760 HHFKDGLCSCRDYW 773
HHF+DG CSC+DYW
Sbjct: 790 HHFRDGYCSCKDYW 803
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRV-STYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CGDA E A+AV E ++ +R S++N ++ +Y+ MD A S+F NM ER + S
Sbjct: 211 CGDA---ETARAVFERMK-----VRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVS 262
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
W+ +I G+ +NGL + A+ FS+ A ++PD+ V SAC+ L ML
Sbjct: 263 WNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANL-----RMLKMGKQ 317
Query: 538 SKDYGIVPSMKHYVSIVDMLGST----GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
Y + M + I++ L ST G ++ A ++K + D++V + + G
Sbjct: 318 MHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDK-AVVADLNV---ISFTALLEG 373
Query: 594 NLELGD 599
++LGD
Sbjct: 374 YVKLGD 379
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+N +L MY++ + DA VF+ M ERD SW M+ G + G DAV F G
Sbjct: 99 TWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEG 158
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
L P + V S+C+A G S G+ + S++ M G G + A
Sbjct: 159 LAPSQFMLTNVLSSCAATEARGIGR-KVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETA 217
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
E+M + + W +++L G ++L
Sbjct: 218 RAVFERMKVRSE-SSWNAMVSLYTHQGRMDLA 248
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 410 LPTFSQLMQACGDAKA----LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+P SQ+M A A +E A+ + + + +++ L V ++ +L+ Y + A
Sbjct: 327 MPYSSQIMNALISTYAKSGSVETARRIMD--KAVVADLNVISFTALLEGYVKLGDTKQAR 384
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M RD+ +W MI G+ +NG ++A+++F ++G +P+ V SAC++L
Sbjct: 385 EVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLA 444
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G +H ++ S+ + +I+ + +G + A +++ + W
Sbjct: 445 YLGYGKQIHCRAIRSLQEQSVSVSN--AIITVYARSGSVPLARRVFDQICWRKETVTWTS 502
Query: 585 LMNLCRMHGNLELGDRCAEIVEQL 608
++ HG LG++ + E++
Sbjct: 503 MIVALAQHG---LGEQAIVLFEEM 523
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 245/400 (61%), Gaps = 11/400 (2%)
Query: 384 GLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G V+ G ++A+ + L +LE + + ++ T+S ++AC ALE +H +
Sbjct: 213 GHVQLGDGEKALRLFLNMLEYRVQATEV-TYSSALRACASLAALEPGLQIHSLTVKTTFD 271
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ N ++ MY++C S+ DA VF M ++D SW+ MI+G++ +GLG +A+ IF +
Sbjct: 272 KDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKM 331
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++ +KPD F+GV SAC+ G + +G +F SM +D+GI P ++HY +V +LG G+
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGH 391
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRL 613
LD+A++ I+++P +P V VW L+ C +H ++ELG A+ V +++P S +
Sbjct: 392 LDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNM 451
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
+K + + K K KK + +E + VH + GDTSHPE I ++ L
Sbjct: 452 YATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWL 511
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+ K+AGYIP VL D++ E KE L HSERLA+S G++ +P+ +PIRIMKNLR+C
Sbjct: 512 HMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRIC 571
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K ISK+V RE+++RD RFHHF++GLCSC DYW
Sbjct: 572 VDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + EAIE+ L ++ + TF+ ++QAC + L +H HV ++
Sbjct: 111 IQGYAESVRFLEAIELFVRLHREVLPNQF-TFASVLQACATMEGLNLGNQIHCHVIKIGL 169
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ +Y++C M+++ +F+ R+ +W+T+I G + G GE A+ +F
Sbjct: 170 HSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLN 229
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++ + + AC++L + G L S++ + +++DM G
Sbjct: 230 MLEYRVQATEVTYSSALRACASLAALEPG-LQIHSLTVKTTFDKDIVVTNALIDMYAKCG 288
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
+ +A + M + +V W +++ MHG LG I +++ + +
Sbjct: 289 SIKDARLVFDLMNKQDEVS-WNAMISGYSMHG---LGREALRIFDKMQETEV 336
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 23/280 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
++ +Q C K +H + + L + +N +L MY + D + DA +F M
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEM 99
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ER+ S+ T+I G+A++ +A+++F + + L P+ F V AC+ + + G
Sbjct: 100 PERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLNLGN 158
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + G+ + +++D+ G ++ ++E + P DV W ++
Sbjct: 159 QIHCHVIK--IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDV-TWNTVIV--- 212
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKV 650
G+++LGD E +L + L + V A+E+ + AS LE ++
Sbjct: 213 --GHVQLGD--GEKALRLFLNMLEYR-------VQATEVTYSSALRACASLAALEPGLQI 261
Query: 651 HEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
H T DK + L + G I + R V
Sbjct: 262 HSLTVKTT----FDKDIVVTNALIDMYAKCGSIKDARLVF 297
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 233/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ + G+ A+++L + + V+ T + AC AL + K +H+ + R
Sbjct: 329 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 388
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY C S+ + +F M +RDL SW+ MI+ + +G G DAV++F Q
Sbjct: 389 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 448
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
F+ GLKP+ F + SACS G + EG +F+ M +Y + P+++ Y +VD+L G
Sbjct: 449 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 508
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
+E LEFIEKMP EP+ VW L+ CR+H N +L + A + +L+P N
Sbjct: 509 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMAN 568
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG L KE+ K + +EV+ K+H + GDTSHP ++I A +
Sbjct: 569 IYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 628
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +KE GY+P+T FVL D+D++ KE +L HSE++A++ GL+S+ A P+RI+KNLRV
Sbjct: 629 LYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRV 688
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA K ISK+ R++I+RD RFHHF DG+CSC DYW
Sbjct: 689 CGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 45/260 (17%)
Query: 376 NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
+E GL G +E I++ L+ + + D F ++ +AC + K K V+++
Sbjct: 80 TAIMEMYCGL---GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 136
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
+ + IL M+ +C MD A F + +D+ W+ M++G+ G + A
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 196
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG------MLHFESMSKDYGIVPSMKH 549
+++F + G+KP+ SAC+ L + G + E + D + S+
Sbjct: 197 LNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 256
Query: 550 Y----------------------VSIVDMLGSTGYL-----DEALEFIEKMPMEP----- 577
Y VS ML TG+ ALEF ++M +
Sbjct: 257 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSE 316
Query: 578 ----DVDVWEKLMNLCRMHG 593
DV VW +++ C G
Sbjct: 317 LSTRDVVVWNSIISACAQSG 336
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 26/194 (13%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSM 461
+CI + ++ ++Q C L VH + +++ + V + G +L++Y + +
Sbjct: 8 ECIEI----YASILQKCRKLYNLRLGFQVHAQL--VVNGVDVCEFLGSRLLEVYCQTGCV 61
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+DA +F M+ER++ SW ++ + G E+ + +F G++PD +F VF AC
Sbjct: 62 EDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKAC 121
Query: 522 SAL------GDVVEGMLH--FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
S L DV + ML FE S G SI+DM G +D A F E++
Sbjct: 122 SELKNYRVGKDVYDYMLSIGFEGNSCVKG---------SILDMFIKCGRMDIARRFFEEI 172
Query: 574 PMEPDVDVWEKLMN 587
+ DV +W +++
Sbjct: 173 EFK-DVFMWNIMVS 185
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 50/259 (19%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH---VE 437
+ G +G+ K+A+ V + + + + T + + AC + L + +H + VE
Sbjct: 183 MVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 242
Query: 438 RLLSPLRVSTYNGILKMYSECDS------------------------------------- 460
L S L V N ++ Y++C S
Sbjct: 243 ELDSDLLVG--NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAA 300
Query: 461 ------MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
M A SVFS ++ RD+ W+++I+ A++G +A+D+ + + ++ +
Sbjct: 301 LEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 360
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ ACS L + +G G+ S++DM G G + ++ + MP
Sbjct: 361 VSALPACSKLAALRQGK-EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 575 MEPDVDVWEKLMNLCRMHG 593
+ D+ W ++++ MHG
Sbjct: 420 -QRDLVSWNVMISVYGMHG 437
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 13/419 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S N L V GK+ EA+E + + + D T ++ A
Sbjct: 19 DEMPERDVISWNT----MLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQL 74
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
LE +++H ++ L P+ +S +L MY++C ++ + +F NM RD+++W+ MI
Sbjct: 75 CLLEHGQSIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMPRRDVSTWNVMI 134
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G A +GLG+DA+ +F +F GL P + F+GV +ACS G V EG +F+ M+ YGI
Sbjct: 135 CGLASHGLGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGI 194
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
P M+HY +VD+LG G + EA++ IE M + PD +W ++ CR+HG ELG++
Sbjct: 195 EPEMEHYGCMVDLLGRAGLVFEAIKVIESMAISPDPVLWAMVLCACRIHGLAELGEKIGN 254
Query: 604 IVEQLDPS---------RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYR 654
+ +LDP+ + S+ V L E+ K+A +L+E R KVH +
Sbjct: 255 RLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRFV 314
Query: 655 AGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHG 714
AG H ++ +I ++ + ++ AGY+P VLHDI +E KE A+ HSERLA++ G
Sbjct: 315 AGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFG 374
Query: 715 LLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LL + + IRI+KNLRVC DCH K+IS++ RE+I+RD RFHHFK+G CSC DYW
Sbjct: 375 LLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M ERD+ SW+TM+ + NG +A++ F + +++GL PD+ + + SA + L
Sbjct: 17 LFDEMPERDVISWNTMLMAYVHNGKLGEALECFKRMRESGLVPDEATLVTMLSASAQLCL 76
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G S+ + ++ +++DM G ++++ E MP DV W ++
Sbjct: 77 LEHGQ-SIHSIIDSLSLPMTISIGTALLDMYAKCGCIEQSRLLFENMP-RRDVSTWNVMI 134
Query: 587 NLCRMHGNLELGDRCAEIVEQ-----LDP------SRLNEKSKAGLV 622
HG LG + E+ L P LN S+AGLV
Sbjct: 135 CGLASHG---LGKDALTLFERFLNEGLHPMNVTFVGVLNACSRAGLV 178
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/407 (38%), Positives = 248/407 (60%), Gaps = 19/407 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERL 439
+ G V+ G+ A+ + + ++ + + TFS ++ AC A +E+ K H +
Sbjct: 368 ISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 427
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + ++ MY++ +++ A VF +RDL SW++MI+G+A++G G+ ++ IF
Sbjct: 428 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 487
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + L+ D FIGV SAC+ G V EG +F+ M KDY IVP+M+HY +VD+
Sbjct: 488 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 547
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L++A++ I KMP +W L+ CR+H N++LG+ AE + L P + S A
Sbjct: 548 AGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP----QDSAA 603
Query: 620 GLVPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
++ N +L K+ KK A + +EV++K + AGD SHP++D+I
Sbjct: 604 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 663
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
Y + L ++K+AGY P+T++VLHD+++E KE L HSERLA++ GL+++P PI+I
Sbjct: 664 YLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQI 723
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVCGDCH+ +K+ISKI GR++++RD+ RFHHFK G CSC DYW
Sbjct: 724 VKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G EA E+ + + + + F+ +++ C + K + AK +H V + S
Sbjct: 266 IAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS 325
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ ++ YS+C +DDAF +F M +++ SW +I+G+ +NG + A+++F
Sbjct: 326 DFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFC 385
Query: 501 QF-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q ++ G++P++ F V +AC+A VE F S S G ++ ++V M
Sbjct: 386 QMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK 445
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
G ++ A E + K ++ D+ W +++ HG G + +I E++ L
Sbjct: 446 RGNIESANE-VFKRQVDRDLVSWNSMISGYAQHG---CGKKSLKIFEEMRSKNL 495
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+ + L + D + S +++ CG K VH + VS +
Sbjct: 74 KEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSL 133
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY + +S++D VF M +++ SW +++ G+ +NGL E A+ +FSQ + G+KP+
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F V +A G V +G + +M G+ ++ S+V+M + + +A +
Sbjct: 194 FTFAAVLGGLAADGAVEKG-VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 572 KM 573
M
Sbjct: 253 SM 254
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G ++A+++ ++ + I + TF+ ++ A+E+ VH V +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MYS+ + DA +VF +M R+ SW++MI GF NGL +A ++F +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV 527
+ G+K IF V C+ + ++
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEM 310
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/431 (37%), Positives = 257/431 (59%), Gaps = 20/431 (4%)
Query: 352 MASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
+A+ V N KH+ + + N L G + G V EA+ + ++ I D
Sbjct: 397 IAASVFGNLKHK------TVVTWNAMIL----GYAQNGCVNEALNLFCEMQSHDIKPDSF 446
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ A D +AK +H R L V ++ +++C ++ A +F M
Sbjct: 447 TLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLM 506
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ER + +W+ MI G+ NG G +A+D+F++ + +KP++ F+ V +ACS G V EGM
Sbjct: 507 QERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGM 566
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+FESM ++YG+ P+M HY ++VD+LG G LD+A +FI+ MP++P + V ++ CR+
Sbjct: 567 YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRI 626
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV-PVNASELAKEKEN-KKLASQN 642
H N+ELG++ A+ + LDP N + A + V A EK+ +K +
Sbjct: 627 HKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCS 686
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
L+E+R++VH + +G T+HP++ +IYA + L +MK AGY+P+T + HD++++ KE+ L
Sbjct: 687 LVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLL 745
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
+HSERLA++ GLL++ I I KNLRVCGDCH A K IS + GRE+I+RD +RFHHF
Sbjct: 746 SSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHF 805
Query: 763 KDGLCSCRDYW 773
K+G+CSC DYW
Sbjct: 806 KNGICSCGDYW 816
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G + A++V+ +++ D T ++ A D KAL +++H + R
Sbjct: 217 GYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEY 276
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+ +L Y +C S+ A VF M+ R++ SW+TMI G+A+NG E+A F +
Sbjct: 277 MVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKML 336
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG 530
G++P + +G AC+ LGD+ G
Sbjct: 337 DEGVEPTNVSMMGALHACANLGDLERG 363
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 381 QLDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+DG + G+ +EA L +L++ ++ L AC + LE + VH ++
Sbjct: 315 MIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGAL-HACANLGDLERGRYVHRLLDEK 373
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ MYS+C +D A SVF N+ + + +W+ MI G+A+NG +A+++F
Sbjct: 374 KIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLF 433
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL 524
+ + +KPD + V +A + L
Sbjct: 434 CEMQSHDIKPDSFTLVSVITALADL 458
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K +++A+ + + + F+ L+Q G+ L + +H V
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ +Y++C ++DA+ +F M +RDL SW+T++ G+A+NG AV +
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVL 232
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL 524
Q ++AG KPD + V A + L
Sbjct: 233 QMQEAGQKPDSITLVSVLPAVADL 256
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 269/464 (57%), Gaps = 35/464 (7%)
Query: 328 RRQYQQNPNEGQ--YQSY--SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
+R Y ++P+ G +Y GN+ AS+V + +D A ++ +
Sbjct: 34 KRNYVKSPSVGTALLDAYVKRGNVDE---ASKVFQRIEEKDIVAWSA----------MIC 80
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHV--ERLL 440
G + G + A+ + + K+ I + TFS ++ AC A +E+ K +H R
Sbjct: 81 GYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFN 140
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ L VS+ +L MYS+ ++ AF VF ERDL SW+++I+G+A++G G A+++F
Sbjct: 141 NALCVSS--ALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFE 198
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ L+ D FIGV SAC+ G EG +F+ M KD+ I P M+HY +VD+ G
Sbjct: 199 EMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRA 258
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L +A+E I +MP +VW L+ +H NLE+G A+ + L P N S
Sbjct: 259 GMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQ--NPASYVL 316
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + AS +L +EK+ KK+A + +EV++K + + AGD SHP +++IYA
Sbjct: 317 LTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAK 376
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L Q+K AGY P+T +V D+D+E KE L HSERLA++ GL+ +P P++I+KN
Sbjct: 377 LEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKN 436
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCHS +K+IS + GR++++RD+ RFHHFK GLCSC DYW
Sbjct: 437 LRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 227/371 (61%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ L+ A L + + +H + N ++ MY+ C ++DA F M
Sbjct: 448 TFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM 507
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ ++ SW ++I+G AK+G + A+ +F AG+KP+D +I V SACS +G V EG
Sbjct: 508 KDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGK 567
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
HF SM KD+G++P M+HY IVD+L +G ++EA +FI +MP + D VW+ L++ CR
Sbjct: 568 EHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRT 627
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAKEKENKKLASQN 642
+GN E+G+ A V L+P N + AGL L ++K K +
Sbjct: 628 YGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLS 687
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
++V + +HE+RAGDTSHP IYA + L ++K+ GY+P+T VLHD+ +E KE+ L
Sbjct: 688 WMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYL 747
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
L HSE++AV+ GL+++ A P+RI KNLRVC DCHSA+K ISK GRE+I+RD+ RFH
Sbjct: 748 LQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRM 807
Query: 763 KDGLCSCRDYW 773
KDG+CSC +YW
Sbjct: 808 KDGICSCGEYW 818
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 108/260 (41%), Gaps = 31/260 (11%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCI 406
++ G + V C D FA R+ DGL++ V + + ++ C
Sbjct: 171 LKTGFWGTDVSVGCALIDMFA---RNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCA 227
Query: 407 SVDLPTF---------------SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
S + F S ++ AC + ++ + +H RL G+
Sbjct: 228 SKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGL 287
Query: 452 LKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV-DIFSQFKQAGL 507
+ MY++ SM+ A VF M ++ SW +I+G+ ++G+ E+ V +F + +
Sbjct: 288 VDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESI 347
Query: 508 KPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+P+ + + AC+ L D G +H + V + + ++V M +G ++EA
Sbjct: 348 RPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGN--ALVSMYAESGCMEEA 405
Query: 567 LEFIEK------MPMEPDVD 580
+ ++ + M PDV+
Sbjct: 406 RKAFDQLYETNILSMSPDVE 425
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS ++ M++ + A VF + ER W +IT + + G V++F
Sbjct: 180 VSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLD 239
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTG 561
G +PD + SAC+ LG V G S++ G+V +VDM L
Sbjct: 240 DGFEPDGYSMSSMISACTELGSVRLGQ-QLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
++ A + + MP +V W L++
Sbjct: 299 SMEHARKVFKTMP-RHNVMSWTALIS 323
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
++L+ + A L +A+H + R +L V N +L MYS+C +++ A VF M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAV-VANSLLTMYSKCGAVEAARRVFDQM 102
Query: 472 T-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC------SAL 524
RDL SW M + A+NG +++ + + + GL+P+ AC
Sbjct: 103 CGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLA 162
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G VV G F + +G S+ +++DM G L A + + +E VW
Sbjct: 163 GGVVLG---FVLKTGFWGTDVSVG--CALIDMFARNGDLVAAQRVFDGL-IERTSVVWTL 216
Query: 585 LMN 587
L+
Sbjct: 217 LIT 219
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 248/424 (58%), Gaps = 13/424 (3%)
Query: 363 EDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD 422
E F+ + N + G + + +A++++ + + +D ++ ++ A
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
LE VH R V + ++ MYS+C +D A F+ M R+ SW++M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDY 541
I+G+A++G GE+A+ +F K G P D + F+GV SACS G + EG HFESMS Y
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-NLELGD 599
G+ P ++H+ + D+LG G LD+ +FIEKMPM+P+V +W ++ CR +G ELG
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811
Query: 600 RCAEIVEQLDPSRLNEKSKAGLV---------PVNASELAKEKENKKLASQNLLEVRSKV 650
+ AE++ QL+P G + V A + K+ + KK A + + ++ V
Sbjct: 812 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 871
Query: 651 HEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLA 710
H + AGD SHP+ D IY ++ L +M++AGY+P+T F L+D++QE KEE L HSE+LA
Sbjct: 872 HMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLA 931
Query: 711 VSHGLLSS-PARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
V+ L + + PIRIMKNLRVCGDCHSA K ISKI GR++I+RD+ RFHHF+DG CSC
Sbjct: 932 VAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991
Query: 770 RDYW 773
D+W
Sbjct: 992 SDFW 995
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 426 LEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
L++ + VH HV L V NG++ MY++C S+ DA VF MT++D SW++MIT
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGI 543
G +NG +AV+ + ++ + P I S+C++L G +H ES+ GI
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL--KLGI 446
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ +++ + TGYL+E + MP E D W ++
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSII 488
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G EA+E + + I T + +C K + + +H +L
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG-EDAVDIF 499
L VS N ++ +Y+E +++ +FS+M E D SW+++I A++ +AV F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 500 SQFKQAGLKPDDQIF 514
++AG K + F
Sbjct: 506 LNAQRAGQKLNRITF 520
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD--AKALEEAKAVHEHVERL 439
+ G + G+ KEA+ L + K+ I + F +++AC + + + + +H + +L
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 440 LSPLRVSTYNGILKMYSEC-DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MY +C S+ A F ++ ++ SW+++I+ +++ G A I
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRI 193
Query: 499 FSQFKQAGLKPDDQIFIG-VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
FS + G +P + F V +ACS V + + G++ + +V
Sbjct: 194 FSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAF 253
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+G L A + +M V + ++ L R
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y E A VF M R+ SW +++G+++NG ++A+ + G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 509 PDDQIFIGVFSACSALGDV 527
+ F+ V AC +G V
Sbjct: 100 SNQYAFVSVLRACQEIGSV 118
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 247/408 (60%), Gaps = 17/408 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE 437
++G V+ G+ KEA+ + ++ ++ P T S ++ ACG ALE K H +++
Sbjct: 167 MINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYID 226
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAV 496
+ P+ V ++ MY++C S++ A VFSN+ +D+ +W MI+G A +GL E+ V
Sbjct: 227 KCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECV 286
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+FS+ G++P+ F+ VF AC G V EG + M++DY I+P+++HY +VD+
Sbjct: 287 GLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDL 346
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G G + EA ++ MPMEPDV VW L++ RMHG++E + + + +L+P+ N
Sbjct: 347 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPT--NSG 404
Query: 617 SKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L V A +L + KK+ +L+EV +HE+ GD SHPET +
Sbjct: 405 AYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQ 464
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
I+ ++ + ++K GY+ T+ VL D+D+EGKE AL HSE+LA+++G L + PIR
Sbjct: 465 IHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIR 524
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLR+C DCH A+K+ISK+ RE+I+RD RFHHF GLCSCRDYW
Sbjct: 525 IVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 38/254 (14%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G I + + + D TF L+Q+ L ++VH + R +
Sbjct: 43 GPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQ 102
Query: 449 NGILKMYSECDSM-------------------------------DDAFSVFSNMTERDLT 477
++ MYS C ++ D A ++F+ M ER++
Sbjct: 103 TSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVI 162
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAG---LKPDDQIFIGVFSACSALGDVVEGMLHF 534
SW MI G+ + G ++A+ +F + + G ++P++ GV +AC LG + G
Sbjct: 163 SWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAH 222
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ K G+ + +++DM G +++A + DV W +++ MHG
Sbjct: 223 AYIDK-CGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHG- 280
Query: 595 LELGDRCAEIVEQL 608
L + C + ++
Sbjct: 281 --LAEECVGLFSKM 292
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 238/405 (58%), Gaps = 13/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
LDG + ++A ++L + ++ + V TF+ L+ + ++ + + +H V +L
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS+C S+D A VF+ M R++ SW +MITGFAK+G ++ F+Q
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP++ ++ + SACS +G V EG HF SM +D+ I P M+HY +VD+L G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L +A EFI MP + DV VW + CR+H N ELG A + +LDP+ +
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 622 VPVNASELAKEKE-NKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A + + E +K+ +NL +EV K+H++ GDT+HP +IY +
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745
Query: 673 LRAQMKEAGYIPETRFVLHDI----DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L ++K GY+P+T VLH + D+ KE L HSE++AV+ GL+S+ P+R+ K
Sbjct: 746 LITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFK 805
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A+K IS + GRE+++RD RFHHFKDG CSC DYW
Sbjct: 806 NLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 389 GKVKEAIEVLGLLEKQCIS-VDLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVS 446
G ++ A+ L L+ + I +D TFS L+++C A+ K VH +E + P V
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV- 98
Query: 447 TYNGILKMYSEC-DSM--DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
YN ++ +YS+ DS +D F +RD+ SW M+ + NG DA+ +F +F
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 504 QAGLKPDDQIFIGVFSACS-----ALGDVVEGML----HFESMSKDYGIVPSMKHYVSIV 554
+ GL P+D + V ACS +G V G L HFES D + S++
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES---DVCV------GCSLI 209
Query: 555 DML--GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G + + A + +KM E +V W ++ C G
Sbjct: 210 DMFVKGENSF-ENAYKVFDKMS-ELNVVTWTLMITRCMQMG 248
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD---SMDDAFSVF 468
T S + AC + + L K +H R S L ++ MY++C S+DD VF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIR--SGLVDDVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 469 SNMTERDLTSWDTMITGFAKN-GLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGD 526
M + + SW +ITG+ KN L +A+++FS+ Q ++P+ F F AC L D
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+S ++A+ VF M+E ++ +W MIT + G +A+ F +G + D VF
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGYLDEALEFIEKMPM 575
SAC+ L ++ G S + G+V ++ S+VDM + G +D+ + ++M
Sbjct: 277 SACAELENLSLGK-QLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRME- 332
Query: 576 EPDVDVWEKLMN 587
+ V W L+
Sbjct: 333 DHSVMSWTALIT 344
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 252/428 (58%), Gaps = 13/428 (3%)
Query: 358 NNCKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
+ CK D AE + Q+ + + G + G++ EAI+ ++ Q I D T
Sbjct: 423 SKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMV 482
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
++ A + L +AK +H V R V ++ MY++C ++ A +F M ER
Sbjct: 483 SVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDER 542
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
+T+W+ MI G+ +GLG+ A+++F + K+ +KP++ F+ V SACS G V EG +F
Sbjct: 543 HVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYF 602
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
SM KDYG+ P+M HY ++VD+LG L+EA +FI+KMP+EP + V+ ++ CR+H N
Sbjct: 603 GSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKN 662
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK---------EKENKKLASQNLLE 645
+ELG++ A + LDP + AS K +K +K +++E
Sbjct: 663 VELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVE 722
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
++++VH + +G TSHP+ KIYA + L ++K AGY+P+T V HD++ KE+ L +H
Sbjct: 723 LQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSH 781
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE+LA++ LL++ I + KNLRVCGDCH+A K IS + RE+I+RD +RFHHFKDG
Sbjct: 782 SEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDG 841
Query: 766 LCSCRDYW 773
CSC DYW
Sbjct: 842 TCSCGDYW 849
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 15/233 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ G A+E+ + + + + T + AC D +E+ + VH+ +++L
Sbjct: 348 MIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLE 407
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS N ++ MYS+C +D A +F N+ + L SW+ MI G+A+NG +A+D F
Sbjct: 408 LGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFC 467
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + +KPD + V A + L + + G++ + K+ + ++VD
Sbjct: 468 KMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVA------TALVD 521
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
M G + A + + M E V W +++ HG LG E+ E++
Sbjct: 522 MYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGTHG---LGKAALELFEKM 570
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G + + +A+ + + + F+ L++ CGD L + K +H +
Sbjct: 146 MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V G++ MY++C +++A+ +F M ERDL W+T+I+G+A+NG G+ A+++
Sbjct: 206 FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVL 265
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++ G +PD + + A + +G + G +H SM G + ++VDM
Sbjct: 266 RMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRA--GFESFVNVSTALVDMYSK 323
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + A ++M + V W +++
Sbjct: 324 CGSVGTARLIFDRMTGKTVVS-WNSMID 350
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 77/149 (51%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G K A+E++ ++++ D T ++ A D +L +++H + R
Sbjct: 248 ISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGF 307
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ ++ MYS+C S+ A +F MT + + SW++MI G+ +NG A++IF +
Sbjct: 308 ESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQK 367
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ + +G AC+ LGDV +G
Sbjct: 368 MMDEQVEMTNVTVMGALHACADLGDVEQG 396
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ ++ + S+ +A VF + ++ + TM+ G+A+N +DAV F + + G++P
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 511 DQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F + C D+ +G +H + + G ++ +V+M ++EA +
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVN--GFASNVFAMTGVVNMYAKCRLVEEAYKM 232
Query: 570 IEKMPMEPDVDVWEKLMN 587
++MP E D+ W +++
Sbjct: 233 FDRMP-ERDLVCWNTIIS 249
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 247/408 (60%), Gaps = 17/408 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE 437
++G V+ G+ KEA+ + ++ ++ P T S ++ ACG ALE K H +++
Sbjct: 136 MINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYID 195
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAV 496
+ P+ V ++ MY++C S++ A VFSN+ +D+ +W MI+G A +GL E+ V
Sbjct: 196 KCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECV 255
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+FS+ G++P+ F+ VF AC G V EG + M++DY I+P+++HY +VD+
Sbjct: 256 GLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDL 315
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G G + EA ++ MPMEPDV VW L++ RMHG++E + + + +L+P+ N
Sbjct: 316 YGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPT--NSG 373
Query: 617 SKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L V A +L + KK+ +L+EV +HE+ GD SHPET +
Sbjct: 374 AYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQ 433
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
I+ ++ + ++K GY+ T+ VL D+D+EGKE AL HSE+LA+++G L + PIR
Sbjct: 434 IHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIR 493
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLR+C DCH A+K+ISK+ RE+I+RD RFHHF GLCSCRDYW
Sbjct: 494 IVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G I + + + D TF L+Q+ L ++VH + R +
Sbjct: 43 GPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQ 102
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-- 506
++ MYS +D A ++F+ M ER++ SW MI G+ + G ++A+ +F + + G
Sbjct: 103 TSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVN 162
Query: 507 -LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
++P++ GV +AC LG + G + K G+ + +++DM G +++
Sbjct: 163 DVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDK-CGMPVDVVLGTALIDMYAKCGSVEK 221
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
A + DV W +++ MHG L + C + ++
Sbjct: 222 ATWVFSNLGPNKDVMAWSAMISGLAMHG---LAEECVGLFSKM 261
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 255/451 (56%), Gaps = 26/451 (5%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEAS---RSSQNNGTLE---QLDGLVKEGKVKEAIEV 397
SG NG +A+ ++N + EA +Q + + G + G + A ++
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
++ + + D TF+ ++ C + +ALE K +H + L V+ N ++ MY
Sbjct: 520 FQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIR 579
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD-QIFIG 516
C S+ DA +VF ++ RD+ SW MI G A G A+++F Q + G +P D F
Sbjct: 580 CGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTS 639
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
+ SAC+ G V+EG F SM +YG++P+++HY +V +LG EA I +MP
Sbjct: 640 ILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFP 699
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV-----------N 625
PD VWE L+ CR+HGN+ L + A + +LN ++ A + + +
Sbjct: 700 PDAAVWETLLGACRIHGNIALAEHAAN-----NALKLNARNPAVYILLSNVYAAAGRWDD 754
Query: 626 ASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+++ + E + K ++ +EV + +HE+ A D SHPET +IYA ++ L +M+EAGY
Sbjct: 755 VAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGY 814
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
P+T+ VLHD+ + +E +L HSERLA+++GL+ +P PIRI KNLR+CGDCH+A K
Sbjct: 815 FPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKF 874
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+VGRE+I RD+ RFH FK+G CSC DYW
Sbjct: 875 ISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 12/328 (3%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTL---EQ 381
D+ +R ++ EG + +I+ G + C D +A + + +
Sbjct: 246 DEGKRIHKLTVEEG----LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L + G EA E + ++++ T+ ++ AC +KALE K +H H+
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY+ C + A +F M +RDL SW+ +I G+A+ +A+ ++ Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP F+ + SAC+ +G + E + + GI + ++++M G
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCG 480
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKSK- 618
L EA E DV W ++ HG+ E + + + E+L+P + S
Sbjct: 481 SLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEV 646
+G A EL K+ + S L+V
Sbjct: 540 SGCKNPEALELGKQIHGRITESGLQLDV 567
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
D T+ L+Q C + L EAK +H + VE + P + N ++ MY +C S+ DA
Sbjct: 25 TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGP-DIFLSNLLINMYVKCRSVLDAHQ 83
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M RD+ SW+++I+ +A+ G + A +F + + AG P+ +I + +AC + +
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ G +H + + Y P +++ S++ M G G L A
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRA 182
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ AC LE K +H + + N +L MY +C + A VF+ +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ RD+ S++TM+ +A+ ++ + +F Q G+ PD +I + A + + EG
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++ + G+ ++ ++V M G +D A + + + + DV V+ L+
Sbjct: 250 -RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQ 307
Query: 592 HGN 594
HG+
Sbjct: 308 HGH 310
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 238/402 (59%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G++++A+++ + + + D T L+ AC AL +A+H +E+ +
Sbjct: 341 MITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI 400
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V +L MY +C +D+A +VF M ERD+ +W MI G A NG+G+DA++ F
Sbjct: 401 VEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFC 460
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K+ G +P +I V +ACS + EG LHF M + + P ++HY ++D+L +
Sbjct: 461 QMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARS 520
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G LDEA+ ++ MPM+P+ +W +++ CR+H N++L AE + +L P
Sbjct: 521 GLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLY 580
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ S+ L +E+ KK A + + V +VH++ A D SHP T +I A++
Sbjct: 581 NIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMME 640
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K GY P T + D+D+E KE+ALLAHSE++A++ GL+S P PI I+KNLR
Sbjct: 641 EIACRLKSVGYSPVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLR 700
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHSA+K++S++ RE+I+RD RFHHF+DG CSC D+W
Sbjct: 701 VCEDCHSAIKLVSQLWNREIIVRDRSRFHHFRDGACSCNDFW 742
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
CGD + +A+AV + V R P +N I+ Y + +D A S+F M RD+ ++
Sbjct: 285 CGD---IAQAQAVFDAVGRGQKP---EPWNAIIDGYCKLGHVDVARSLFDQMGARDVITF 338
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMS 538
++MITG+ +G DA+ +F Q ++ G++ D+ + + +AC++LG + G LH S
Sbjct: 339 NSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALH---AS 395
Query: 539 KDYGIVPSMKHY-VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ IV + +++DM G +DEA +M E DV W ++
Sbjct: 396 IEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMG-ERDVHTWTAMI 443
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D+A + ER++ SW ++I G+++ G DAV F+ G+ PD+ IG SA
Sbjct: 187 LDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSA 246
Query: 521 CSAL 524
CS L
Sbjct: 247 CSKL 250
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 239/392 (60%), Gaps = 14/392 (3%)
Query: 396 EVLGLLEKQC-----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
E +GL K I + S ++ AC A A++ K +H V R+ V
Sbjct: 137 EAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTS 196
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I+ MYS+C ++ A F + E+++ SW MITG+ +G G++A++IF++ K++GL+P+
Sbjct: 197 IVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN 256
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
FI V +ACS G + EG + +M +++GI ++HY +VD+LG G LDEA I
Sbjct: 257 YITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLI 316
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP 623
++M ++PD +W L++ CR+H N+EL + + + +LD S N ++AG+
Sbjct: 317 KEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWK 376
Query: 624 --VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
L K + +K + E++ K++ + GD SHP+ +IY+ + L +M+EAG
Sbjct: 377 DVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAG 436
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P T VLHD+D+E KE AL HSE+LAV+ L++S R+ I I+KNLRVC DCH+A+K
Sbjct: 437 YVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMK 496
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KI RE+IIRD +RFHHFKDGLCSCRDYW
Sbjct: 497 FITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 447 TYNGILKMYSECDSMD--DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
N +L Y++ S D A VF M ERD+ SW++MI +A+NG+ +A+ ++S+
Sbjct: 89 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 147
Query: 505 A--GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G+K + V AC+ G + G H + G+ ++ SIVDM G
Sbjct: 148 VGGGIKCNAVALSAVLLACAHAGAIQTGK-HIHNQVVRMGLEENVYVGTSIVDMYSKCGR 206
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
++ A K+ E ++ W ++ MHG G EI ++ S L
Sbjct: 207 VEMASRAFRKIK-EKNILSWSAMITGYGMHGR---GQEALEIFTEMKRSGL 253
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 240/405 (59%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G ++A++V + + + TF + A + +++ K +H + +
Sbjct: 589 ISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF 648
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ Y++C S++DA F M E++ SW+ MITG++++G G +AV++F +
Sbjct: 649 DSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEK 708
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
KQ G P+ F+GV SACS +G V +G+ +FESMSK++G+VP HY +VD++ G
Sbjct: 709 MKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAG 768
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+L A +FIE+MP+EPD +W L++ C +H N+E+G+ A+ + +L+P E S +
Sbjct: 769 FLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEP----EDSATYV 824
Query: 622 VPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ N ++ + + KK ++ +EV++ VH + GD HP DKIY
Sbjct: 825 LLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYE 884
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L + E GY + +L+D++QE K+ + HSE+LA++ GLLS PI +MK
Sbjct: 885 FLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMK 944
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHS +K +SKI R +I+RDA RFHHF+ G+CSC+DYW
Sbjct: 945 NLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQAC-GDAKALEEAKAVHEHVE--- 437
+ G +++ +++ + ++ +S +F+ +++AC G + A+ +H +
Sbjct: 83 ISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHG 142
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L SP+ N ++ +Y++ + A VF N+ +D SW MI+GF++NG E+A+
Sbjct: 143 LLCSPI---ISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIH 199
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACS----------------------------ALGDVVE 529
+F + AG+ P +F V S C+ AL +
Sbjct: 200 LFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYS 259
Query: 530 GMLHFESMSKDYGIVPSMKH--YVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEK 584
M +F S K + + S + S++ L G+ D ALE KM ++PD
Sbjct: 260 RMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVAS 319
Query: 585 LMNLCRMHGNLELGDR 600
L++ C +G L G++
Sbjct: 320 LLSACASNGALCKGEQ 335
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 18/199 (9%)
Query: 334 NPNEGQYQSYSGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKV 391
NP G Y +NG++ A +V +N +D + + + G + G
Sbjct: 151 NPLIGLYA------KNGLIISARKVFDNLCTKDSVSWVA----------MISGFSQNGYE 194
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EAI + + I FS ++ C K + + +H V + S L N +
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +YS + A VFS M +D S++++I+G A+ G + A+++F++ K+ LKPD
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 512 QIFIGVFSACSALGDVVEG 530
+ SAC++ G + +G
Sbjct: 315 VTVASLLSACASNGALCKG 333
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 162/377 (42%), Gaps = 50/377 (13%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+LD L + ++ +++ GL+ Q T+ +++ C AL+ + +H V +
Sbjct: 392 KLDNLSESFRIFRQMQIKGLIPNQ------FTYPSILRTCTSVGALDLGEQIHTQVIKTG 445
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MY++ +D A + +TE D+ SW +I+G+A++ L +A+ F
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFK 505
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ G++ D+ F SAC+ + + +G +H +S Y S+ + ++V +
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN--ALVSLYAR 563
Query: 560 TGYLDEA-LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK-S 617
G + EA LEF EK+ + + W L++ G E ++ Q++ ++L
Sbjct: 564 CGRIKEAYLEF-EKIDAKDSIS-WNGLISGFAQSGYCE---DALKVFAQMNRAKLEASFF 618
Query: 618 KAGLVPVNASELAKEKENKKL--------------ASQNLLEVRSK---VHEYRAGDTSH 660
G A+ +A K+ K++ S L+ +K + + R
Sbjct: 619 TFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEM 678
Query: 661 PETDKIY--ALIRG------------LRAQMKEAGYIP-ETRF--VLHDIDQEGKEEALL 703
PE + + A+I G L +MK+ G +P F VL G L
Sbjct: 679 PEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGL 738
Query: 704 AHSERLAVSHGLLSSPA 720
+ E ++ HGL+ PA
Sbjct: 739 GYFESMSKEHGLVPKPA 755
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL ++G A+E+ +++ + D T + L+ AC AL + + +H +V +
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +L +Y C + A +F ++ W+ M+ F K ++ IF Q
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ 405
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLG 558
+ GL P+ + + C+++G + G +H + + + YV ++DM
Sbjct: 406 MQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF----QFNVYVCSVLIDMYA 461
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G LD A I + E DV W L++
Sbjct: 462 KHGKLDTA-HVILRTLTEDDVVSWTALIS 489
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
+E + I + T+ L+ C ++ +L E K +H + +L N ++ +Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D VF +M R + SWD +I+GF + + +D+FS + + P + F V A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 521 CS 522
CS
Sbjct: 121 CS 122
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 217/336 (64%), Gaps = 13/336 (3%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MYS+C + + A VF++M R++ +W ++I+GFAK+G A+++F + + G+K
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK 546
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P++ +I V SACS +G + E HF SM ++ I P M+HY +VD+LG +G L EA+E
Sbjct: 547 PNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIE 606
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE 628
FI MP + D VW + CR+H N +LG+ A+ + + +P + + L + ASE
Sbjct: 607 FINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPH--DPATYILLSNLYASE 664
Query: 629 --------LAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
L K + KKL + + +EV ++VH++ GDTSHP+ KIY + L ++
Sbjct: 665 GRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKI 724
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K GYIP T FVLHD++ E KE+ L HSE++AV++ L+S+P PIR+ KNLRVCGDCH
Sbjct: 725 KNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCH 784
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A+K IS + GRE+++RDA RFHH KDG CSC DYW
Sbjct: 785 TAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-- 471
S L++AC + LE K +H + PL N ++ +YS+C ++A S+F NM
Sbjct: 43 SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG---LKPDDQIFIGVFSACS 522
+RDL SW +I+ FA N + A+ F Q + P++ F + +CS
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCS 156
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G + +A+++ L + D T + L+ AC + + K +H V R S L +
Sbjct: 227 GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIR--SGLASDVF 284
Query: 449 NG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
G ++ MY++ +++++ +F+ M ++ SW +I+G+ ++ ++A+ +F
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 507 LKPDDQIFIGVFSACSALGDV-VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ P+ F V AC++L D + LH +++ + + + S+++M +G ++
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGN--SLINMYARSGTMEC 402
Query: 566 A 566
A
Sbjct: 403 A 403
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M ++L +W MIT +++ GL +DAVD+F + + PD + SAC L
Sbjct: 204 VFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEF 263
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G S G+ + ++VDM + ++ + + M + +V W L+
Sbjct: 264 FSLGK-QLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALI 321
Query: 587 N 587
+
Sbjct: 322 S 322
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 118/267 (44%), Gaps = 21/267 (7%)
Query: 341 QSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQN----NGTLEQ--------LDGLVKE 388
Q +S I++G+ AS V C D +A+++ + N L + G V+
Sbjct: 269 QLHSWVIRSGL-ASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQS 327
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVST 447
+ +EAI++ + ++ + TFS +++AC K +H +L LS +
Sbjct: 328 RQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTIN-CV 386
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ MY+ +M+ A F+ + E++L S++T AK +++ + + + G+
Sbjct: 387 GNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGV 444
Query: 508 KPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + S + +G +V+G +H + +G + + +++ M G + A
Sbjct: 445 GASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGNKEAA 502
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
L+ M +V W +++ HG
Sbjct: 503 LQVFNDMGYR-NVITWTSIISGFAKHG 528
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 243/403 (60%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G+ EA+ + + + + D T L+ AC + AL + H ++ ++
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L +Y++C S+ A VF M E+ + SW ++I G A NG G++A+++F +
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GL P + F+GV ACS G V EG +F+ M ++YGIVP ++HY +VD+LG G
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+ +A EFI+ MPM+P+ VW L+ C +HG+L LG+ + QL+P + L
Sbjct: 393 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPK--HSGDYVLL 450
Query: 622 VPVNASE-----LAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ ASE + K + KK +L+E+R+++HE+ GD SHP+T++IY +
Sbjct: 451 SNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKL 510
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +K GY+P VL DI++E KE AL HSE++A++ L+++ A PIR++KNL
Sbjct: 511 AEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNL 570
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+K+ISK+ RE+++RD RFHHFKDG CSC+DYW
Sbjct: 571 RVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 13/230 (5%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+E+ + CI D T+ L++A + E + VH R V N ++
Sbjct: 124 ALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVH 183
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY+ C + A +F M ER+L +W+++I G+A NG +A+ +F + G++PD
Sbjct: 184 MYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 243
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ + SAC+ LG + G M K G+ ++ +++D+ G + +A + ++M
Sbjct: 244 MVSLLSACAELGALALGRRAHVYMVK-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEM 302
Query: 574 PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
E V W L+ ++G G E+ ++L+ + GL+P
Sbjct: 303 E-EKSVVSWTSLIVGLAVNG---FGKEALELFKELE--------RKGLMP 340
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I + S C M A +FS + ++ +W+TMI G+A++ A++++ Q + ++PD
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPD 139
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ + A + L DV EG +H ++ + + +++ ++V M + G+ + A +
Sbjct: 140 THTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQN--TLVHMYAACGHAESAHKL 197
Query: 570 IEKMPMEPDVDVWEKLMN 587
E M E ++ W ++N
Sbjct: 198 FELMA-ERNLVTWNSVIN 214
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 239/393 (60%), Gaps = 14/393 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYN 449
KEA+ + +E + D+ + ++ A GD AL + VH+ ER LL L + N
Sbjct: 271 KEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLE--N 328
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C + DA +VF+ M RD+ SW ++I+ + K G G DAV +F++ + +GL P
Sbjct: 329 ALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNP 388
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F+ V +ACS G + +G +F M+ + GI P ++H+ +VD+LG G +DEA F
Sbjct: 389 DSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGF 447
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV 622
I +MP+EPD VW L++ CR++ N+ +G A+ + L+P N +KAG
Sbjct: 448 IRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRW 507
Query: 623 PVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
A+ + + K KKL + +E+ VH + AGD SHP++ KIY + L +MKE
Sbjct: 508 ADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKEL 567
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+PET LHD+++E KE L HSE+LAV+ ++++ PIR+ KNLRVCGDCH A
Sbjct: 568 GYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAA 627
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISKI RE+IIRD RFHHF++G CSC DYW
Sbjct: 628 KLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+A+ V + Q D+ T+ +++A + +L +H V ++ L + NG+
Sbjct: 102 KDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGL 161
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C S+ +A V + RD+ SW++M++ +A+NG DA+++ + + LKP+D
Sbjct: 162 IAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPND 221
Query: 512 QIFIGVFSACS 522
+ A +
Sbjct: 222 CTMASLLPAVT 232
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 52/265 (19%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILK 453
+++ G + K + ++L + L+ G K+L+EA+ V + + P R V ++N ++
Sbjct: 140 LQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEI-----PCRDVVSWNSMVS 194
Query: 454 MYSECDSMDDAFSV-------------------------------------FSNMTERDL 476
+Y++ +DA + F +T++ +
Sbjct: 195 VYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSV 254
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML--HF 534
SW+ MI + N + ++AV ++SQ + G++PD + + S A GD+ L
Sbjct: 255 ISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPD---VVSIVSVLPAYGDLSALSLGRRV 311
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
++ ++P++ +++DM G L +A +M DV W +++ +G
Sbjct: 312 HKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR-DVVSWTSIIS---AYGK 367
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKA 619
G + ++ S LN S A
Sbjct: 368 CGQGRDAVAVFAEMRNSGLNPDSIA 392
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++++Y+ C A +F +T++++ ++ MI + N L +DA+ ++ G PD
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALE 568
+ V A S+ D + L G+ + YV ++ M G L EA +
Sbjct: 120 MYTYPCVLKA-SSRSDSLWVGLQIHGAVLKIGL--DLNLYVGNGLIAMYGKCKSLKEAQQ 176
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLVP 623
++++P DV W ++++ +G + E+ +++ L N+ + A L+P
Sbjct: 177 VLDEIPCR-DVVSWNSMVSVYAQNGRF---NDALELCREMEALNLKPNDCTMASLLP 229
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 245/406 (60%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G+ EA+ + ++ + D T ++ AC D ALE K + ++ER
Sbjct: 205 MIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHE 264
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ P+ VS N ++ M+++C + A +F M E+ + SW ++I G A +G G++A +
Sbjct: 265 IHKPVEVS--NALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCL 322
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + +G+ PDD FIG+ SACS G V G +F SM K Y +VP ++HY +VDM
Sbjct: 323 FEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYC 382
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
TG + EALEF+ MP+EP+ + L++ CR HG +LG++ +++ + +P L+E +
Sbjct: 383 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEP--LHESNY 440
Query: 619 AGLVPVNASELAKEKENK-----------KLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A L+ EK+ K K+ ++E+ ++++E+ AGD SH + +IY
Sbjct: 441 VLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIY 500
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++ + +MK++GY P T VL DI++E KE++L HSE+LA++ GLL +P PIRI+
Sbjct: 501 EMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIV 560
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCHSA K ISKI RE+I+RD RFHHFK G CSC D+W
Sbjct: 561 KNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A+ + G++ I + T+ +++AC + L + VH V + + N ++
Sbjct: 115 KALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMV 174
Query: 453 KMYSECDS-MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
MYS C ++ A VF M + D +W MI G+A+ G +AV +F + + A + PD+
Sbjct: 175 HMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDE 234
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ + SAC+ LG + G E+ + + I ++ +++DM G + +AL+
Sbjct: 235 ITMVSMLSACTDLGALELGKW-IEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFR 293
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
M E + W ++ MHG
Sbjct: 294 AMN-EKTIVSWTSVIVGMAMHG 314
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 240/404 (59%), Gaps = 15/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G EAIEV ++E +C + +P T+ ++ A AL++ +H V +
Sbjct: 491 ITGYAQNGLASEAIEVYKMME-ECKEI-IPNQGTWVSILPAYAHVGALQQGMKIHGRVIK 548
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L V ++ +Y +C + DA S+F + + +W+ +I+ +G E + +
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+KPD F+ + SACS G V EG F M ++YGI PS+KHY +VD+LG
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLG 667
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
GYL+ A +FI+ MP++PD +W L+ CR+HGN+ELG ++ + ++D +
Sbjct: 668 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 619 AGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ N + LA+E+ KK + +EV KV + G+ SHP+ +IY
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+R L A+MK GYIP+ FVL D++++ KE L +HSERLA++ G++S+P ++PIRI KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K IS+I RE+++RD+ RFHHFKDG+CSC DYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER---LLSPLRVSTYNGILKMYSECDSMDDAF 465
DL T L ++ + +++VH + R L+ + + N ++ MY++ +D A
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG--NAVVDMYAKLGLLDSAH 473
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSAL 524
VF + +D+ SW+T+ITG+A+NGL +A++++ ++ + P+ ++ + A + +
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 525 GDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
G + +GM +H + + + + ++D+ G G L +A+ ++P E V W
Sbjct: 534 GALQQGMKIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWN 590
Query: 584 KLMNLCRMHGNLE 596
+++ +HG+ E
Sbjct: 591 AIISCHGIHGHAE 603
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ V G EAI LL I D TF +++ACG L + + +H +L
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKL 244
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MYS A S+F +M RD+ SW+ MI+G +NG A+D+
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+K + + + C LGD+ ML + K +G+ + ++++M
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAK 363
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L++A + ++M + DV W ++
Sbjct: 364 FGNLEDARKAFQQMFIT-DVVSWNSII 389
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL++ G +A++VL + + I ++ T ++ C + A +H +V +
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++ +++DA F M D+ SW+++I + +N A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + G +PD + + S + D V G + + ++ + ++VD
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN-----AVVD 461
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M G LD A + E +P++ DV W L+
Sbjct: 462 MYAKLGLLDSAHKVFEIIPVK-DVISWNTLIT 492
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
AK L V V+ + R ++ +Y+ + + F + ++D+ +W++M
Sbjct: 135 AKCLHALLVVAGKVQSIFISTR------LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 188
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
I+ + NG +A+ F Q ++PD F V AC G +V+G +
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGR-KIHCWAFKL 244
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G ++ S++ M G+ A + MP D+ W +++ +GN
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------A 297
Query: 602 AEIVEQLDPSRL-----NEKSKAGLVPV 624
A+ ++ LD RL N + ++PV
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPV 325
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 240/402 (59%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EAIE+ ++E++ I+ + T+ ++ AC A AL + +H + +
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V + MY +C ++DA S+F + + W+T+I +G GE AV +F
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G+KPD F+ + SACS G V EG FE M DYGI PS+KHY +VDM G
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+ AL+FI+ M ++PD +W L++ CR+HGN++LG +E + +++P +
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 621 LVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ +A + +A K +K + +EV +KV + G+ +HP +++Y +
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L+A++K GY+P+ RFVL D++ + KE L++HSERLA++ L+++PA+ IRI KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCHS K ISKI RE+I+RD+ RFHHFK+G+CSC DYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G KEA+ + L ++D T L+ AC +A +H + +
Sbjct: 222 MISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L VS N ++ +Y+E + D VF M RDL SW+++I + N A+ +
Sbjct: 278 LESELFVS--NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSI 553
F + + + ++PD I + S S LGD+ V+G ++ K + + + ++
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF----TLRKGW-FLEDITIGNAV 390
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V M G +D A +P DV W +++
Sbjct: 391 VVMYAKLGLVDSARAVFNWLP-NTDVISWNTIIS 423
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEASRS---SQNNGTLE---QLDGLVKEGKVKEAIEV 397
S IQN ++++++N + + A A + QN + G + G E I
Sbjct: 80 SKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRC 139
Query: 398 LGL-LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
L + ++ D TF +++AC + + + +H + V ++ +YS
Sbjct: 140 FSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS 196
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI-FI 515
++ +A +F M RD+ SW+ MI+G+ ++G ++A+ + GL+ D + +
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVV 251
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
+ SAC+ GD G + S S +G+ + ++D+ G L + + ++M +
Sbjct: 252 SLLSACTEAGDFNRG-VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 576 EPDVDVWEKLM 586
D+ W ++
Sbjct: 311 R-DLISWNSII 320
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L+ AK +H + V ++ +Y ++ A F ++ RD+ +W+ MI+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 486 FAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
+ + G + + FS F +GL PD + F V AC V++G ++ +G +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGN-KIHCLALKFGFM 182
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ S++ + + A ++MP+ D+ W +++
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMIS 224
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 223/375 (59%), Gaps = 14/375 (3%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P+ ++ C L+ + VH + R + V + ++ MY +C ++D A VF
Sbjct: 334 PSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT 393
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ W++MITG+A++GLGE A+ IF + AG+ PD +IG +ACS G V EG
Sbjct: 394 FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEG 453
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F SM+ + I P +HY +VD+LG +G ++EA + I+ MP+EPD +W LM CR
Sbjct: 454 REIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACR 513
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE---KENKKLASQNL---- 643
MH N E+ + A+ + +L+P N L + S E K K ++S+NL
Sbjct: 514 MHRNAEIAEFAAKKLLELEPG--NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 644 ----LEVRSKVHEYRAGDT-SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+E +VH + +GD +HPE I ++ L + E+GY + FVLHDID+E K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+L HSER AV++GLL P PIR+MKNLRVCGDCHSA+K+I+KI RE+I+RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANR 691
Query: 759 FHHFKDGLCSCRDYW 773
FHHFKDG CSCRDYW
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ + + +D A +VF M ERD +W MI + +N +A+ F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P+ I + + C+AL + G +H + + + + +++ M G L
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM--DVFAVSALITMYIKCGNL 384
Query: 564 DEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
D+A EP D+ +W ++ HG LG++ I + RL S G+
Sbjct: 385 DKAKRVFHT--FEPKDIVMWNSMITGYAQHG---LGEQALGIFHDM---RLAGMSPDGIT 436
Query: 623 PVNA----SELAKEKENKKL 638
+ A S K KE +++
Sbjct: 437 YIGALTACSYTGKVKEGREI 456
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G + +AI + +Q + +++ L+ DA + EA+ + + +
Sbjct: 119 LRGYVRHGLLADAIRLF----QQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----- 169
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R V + +L Y + + +A ++F M +R++ SW MI+G+A+NG A +F
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML--- 557
+ + +G A H E ++ + +P +H V+ + +
Sbjct: 230 VMPERNEVSWTAMLVGYIQAG-----------HVEDAAELFNAMP--EHPVAACNAMMVG 276
Query: 558 -GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G G +D A EKM E D W ++
Sbjct: 277 FGQRGMVDAAKTVFEKM-CERDDGTWSAMIK 306
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 239/402 (59%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G E ++ + I + +FS +M AC L K +H ++ R
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY++C ++ A +F M D+ SW MI G+A +G DA+ +F +
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP+ F+ V +ACS G V E +F SM++DY I+P ++HY ++ D+LG G
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 488
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L+EA EFI M +EP VW L+ CR+H N+EL ++ ++ + +DP + N
Sbjct: 489 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 548
Query: 615 EKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
S AG +A +L ++K KK + + +E+++KVH + AGD SHP D+I ++
Sbjct: 549 IYSAAGRWK-DARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALK 607
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L QM+ GY+ +T VLHD+++E K L +HSERLA++ G++S+PA IR+ KNLR
Sbjct: 608 VLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 667
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A K ISKIVGRE+++RD RFHHFKDG CSC D+W
Sbjct: 668 VCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 22/225 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ + L + K +H + R V + ++ MY++C +DD+ VF +
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ D SW+++I G +NG+ ++ + F Q A +KP+ F + AC+ L
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT----- 352
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
LH Y I V ++VDM G + A +KM + D+ W ++
Sbjct: 353 LHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIM 411
Query: 588 LCRMHGN----LELGDRCAEIVEQLDP------SRLNEKSKAGLV 622
+HG+ + L R VE + P + L S AGLV
Sbjct: 412 GYALHGHAYDAISLFKRME--VEGVKPNYVAFMAVLTACSHAGLV 454
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 38/247 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD--------- 462
F ++++C K L ++VH + RL + T N ++ MYS+ S++
Sbjct: 108 VFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVF 167
Query: 463 ------DAFS--------------VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
D +S VF M +RD+ SW+T+I+G A+NG+ EDA+ + +
Sbjct: 168 DEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM 227
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
A L+PD V + ++++G +H ++ Y + S++DM
Sbjct: 228 GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS--SLIDMYAKCT 285
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRLNEKSKA 619
+D++ +P + W ++ C +G + G + + ++ ++ P N S +
Sbjct: 286 RVDDSCRVFYMLPQHDGIS-WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP---NHVSFS 341
Query: 620 GLVPVNA 626
++P A
Sbjct: 342 SIMPACA 348
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 416 LMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L+Q K+ +AK +H + R L SP +ST IL +YS + + D+ +F+++
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST---ILSIYSNLNLLHDSLLIFNSLPS 67
Query: 474 RDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
T +W ++I + +GL ++ F Q +G PD +F V +C+ + D+
Sbjct: 68 PPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDL 122
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 260/467 (55%), Gaps = 22/467 (4%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMM-------ASQVLNNCKHEDDFAEASRSS--QN 375
D++R+ + P + S N+ +G+ A ++ + + A S S ++
Sbjct: 104 DEARQLFDMMPVKDVVAS--TNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKD 161
Query: 376 NGTLEQLDGLV-KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE 434
+GT + + ++G EA+ + L++++ + P+ ++ CG +L+ + VH
Sbjct: 162 DGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHS 221
Query: 435 HVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
+ R + + + ++ MY +C + A VF + +D+ W+++I G+A++G GE
Sbjct: 222 QLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK 281
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
A+++F + + PD+ FIGV SACS G V EG+ FESM Y + P +HY +V
Sbjct: 282 ALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMV 341
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---- 610
D+LG G L+EA+ IE MP+E D VW L+ CR H NL+L + A+ + QL+P
Sbjct: 342 DLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAG 401
Query: 611 -----SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYR-AGDTSHPETD 664
S L V + + K +K + +EV KVH + G TSHPE +
Sbjct: 402 PYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHE 461
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
I + L A ++EAGY P+ FV+HD+D+E K +L HSE+LAV++GLL P PI
Sbjct: 462 MILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPI 521
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRD 771
R+MKNLRVCGD HS +K+I+++ GRE+I+RD RFHHFKDGLCSC D
Sbjct: 522 RVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG++ Y + + +A VF M ER++ SW MI G+ + GL E+A +F + +
Sbjct: 27 SWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPER- 85
Query: 507 LKPDDQIFIGVFSACSALGDVVE-GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
V S LG ++E G + D V + +++D L S G L E
Sbjct: 86 ---------NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIE 136
Query: 566 ALEFIEKMPMEPDVDVWEKLMN 587
A E ++MP + +V W +++
Sbjct: 137 AREIFDEMP-QRNVVAWTSMIS 157
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 129/300 (43%), Gaps = 47/300 (15%)
Query: 326 QSRRQYQQNPNEGQYQS---YSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL 382
++R+ + + P SG +QNGM++ K D E + S +
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEAR----KVFDKMPERNVVSWT----AMI 63
Query: 383 DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G V+EG ++EA LL + ++ +++ ++ + ++EA+ + + + P
Sbjct: 64 RGYVQEGLIEEA----ELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFD-----MMP 114
Query: 443 LR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLT-------------SWDTMITGFA 487
++ V++ N I + SE + +A +F M +R++ +W TMI +
Sbjct: 115 VKDVVASTNMIDGLCSE-GRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPS 546
+ G +A+ +FS ++ G++P I V S C +L + G +H + + + I
Sbjct: 174 RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI--- 230
Query: 547 MKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
YVS ++ M G L A ++ D+ +W ++ HG G++ E+
Sbjct: 231 -DIYVSSVLITMYIKCGDLVTAKRVFDRFS-SKDIVMWNSIIAGYAQHG---FGEKALEV 285
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 223/374 (59%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ C L+ K +H R L S N I+ MY+ S A +F +
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQV 492
Query: 472 TERDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R T +W +MI A++G GE+AV +F + +AG++PD ++GV SACS G V EG
Sbjct: 493 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 552
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+++ + ++ I P M HY +VD+L G EA EFI +MP+EPD W L++ CR
Sbjct: 553 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACR 612
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLA 639
+H N EL + AE + +DP+ N + + + V ++ + KEK +K
Sbjct: 613 VHKNAELAELAAEKLLSIDPN--NSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKET 670
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +RSK+H + A D HP+ D +YA+ + ++K AG++P+ + VLHD+D E KE
Sbjct: 671 GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKE 730
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA++ GL+S+P + +R+MKNLRVC DCH+A+K ISK+ RE+I+RDA RF
Sbjct: 731 ELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRF 790
Query: 760 HHFKDGLCSCRDYW 773
HHF+DGLCSC+DYW
Sbjct: 791 HHFRDGLCSCKDYW 804
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CGDA E A V E + P+R VS++N ++ + + MD A S+F +M R + S
Sbjct: 212 CGDA---ETASTVFERM-----PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVS 263
Query: 479 WDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
W+ MI G+ +NGL A+ +FS+ ++ + PD+ V SAC+ LG+V G
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-----KQ 318
Query: 538 SKDYGIVPSMKHYVSIVDMLGST----GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
Y + M + + + L ST G ++ A +++ ME D++V + + G
Sbjct: 319 VHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ-SMETDLNV---ISFTALLEG 374
Query: 594 NLELGD 599
+++GD
Sbjct: 375 YVKIGD 380
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+ G A L +A+ + + + L+ V T+N +L M+++ + DA VF+ M ERD
Sbjct: 73 ETAGGAGGLRDARRLFDEIP--LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV 130
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-GDVVEGMLHFES 536
SW M+ G + G +A+ G P V S+C+ V +H S
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVH--S 188
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G+ + S+++M G G + A E+MP+ V W +++L G ++
Sbjct: 189 FVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVR-SVSSWNAMVSLNTHLGRMD 247
Query: 597 LGD 599
L +
Sbjct: 248 LAE 250
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 223/374 (59%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ C L+ K +H R L S N I+ MY+ S A +F +
Sbjct: 433 TLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQV 492
Query: 472 TERDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R T +W +MI A++G GE+AV +F + +AG++PD ++GV SACS G V EG
Sbjct: 493 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 552
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+++ + ++ I P M HY +VD+L G EA EFI +MP+EPD W L++ CR
Sbjct: 553 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACR 612
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLA 639
+H N EL + AE + +DP+ N + + + V ++ + KEK +K
Sbjct: 613 VHKNAELAELAAEKLLSIDPN--NSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKET 670
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +RSK+H + A D HP+ D +YA+ + ++K AG++P+ + VLHD+D E KE
Sbjct: 671 GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKE 730
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA++ GL+S+P + +R+MKNLRVC DCH+A+K ISK+ RE+I+RDA RF
Sbjct: 731 ELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRF 790
Query: 760 HHFKDGLCSCRDYW 773
HHF+DGLCSC+DYW
Sbjct: 791 HHFRDGLCSCKDYW 804
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CGD+ E A V E + P+R VS++N ++ + + MD A S+F +M +R + S
Sbjct: 212 CGDS---ETATTVFERM-----PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVS 263
Query: 479 WDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
W+ MI G+ +NGL A+ +FS+ ++ + PD+ V SAC+ LG+V G
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-----KQ 318
Query: 538 SKDYGIVPSMKHYVSIVDMLGST----GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
Y + M + + + L ST G ++ A +++ ME D++V + + G
Sbjct: 319 VHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ-SMETDLNV---ISFTALLEG 374
Query: 594 NLELGD 599
+++GD
Sbjct: 375 YVKIGD 380
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+ G A L +A+ + + + L+ V T+N +L M+++ + DA VF+ M ERD
Sbjct: 73 ETAGGAGGLRDARRLFDEIP--LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAV 130
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-GDVVEGMLHFES 536
SW M+ G + G +A+ G P V S+C+ V +H S
Sbjct: 131 SWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVH--S 188
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G+ + S+++M G G + A E+MP+ V W +++L G ++
Sbjct: 189 FVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVR-SVSSWNAMVSLNTHLGRMD 247
Query: 597 LGD 599
L +
Sbjct: 248 LAE 250
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 241/403 (59%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC--ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G EAIEV ++E +C I ++ T+ ++ A AL++ +H H+ +
Sbjct: 448 ISGYTQNGLASEAIEVYRMME-ECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT 506
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L V ++ +Y +C + DA +F + W+ +I+ +G GE A+ +F
Sbjct: 507 NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLF 566
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+KPD FI + SACS G V EG F M ++YGI PS+KHY +VD+LG
Sbjct: 567 REMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGR 625
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G+L+ A +FI+ MP+ PD +W L+ CR+HGN+ELG ++ + ++D +
Sbjct: 626 AGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLL 685
Query: 620 GLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ N + LA+E+ KK + +EV +V + G+ SHP+ +IYA +
Sbjct: 686 SNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAEL 745
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
R L A+MK GYIP+ FVL D++++ KE L +HSERLA++ G++S+P ++ IRI KNL
Sbjct: 746 RILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNL 805
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH+A K IS+I RE+++RD+KRFHHFK+G+CSC DYW
Sbjct: 806 RVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 24/256 (9%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL------------DGLVKEGKV 391
SG IQ+ ++ +++N +A S + GT +Q+ V+ G
Sbjct: 102 SGKIQSNFISIRLVNL------YASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHF 155
Query: 392 KEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+EAI+ LL D TF +++AC + L + + +H V +L V
Sbjct: 156 REAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAAS 212
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MYS + A S+F +M RD+ SW+ MI+G +NG A+D+ + + G+ D
Sbjct: 213 LIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMD 272
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ C+ LGD+ L + K +G+ + ++++M G L +A +
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIK-HGLEFELFVSNALINMYAKFGNLGDAQKVF 331
Query: 571 EKMPMEPDVDVWEKLM 586
++M + DV W ++
Sbjct: 332 QQMFLR-DVVSWNSII 346
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL++ G +A++VL + + I++D T + ++ C + A +H +V +
Sbjct: 244 MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++ ++ DA VF M RD+ SW+++I + +N A F
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFF 363
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + GL+PD + + S + D V G + + ++ + +++D
Sbjct: 364 KMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN-----AVMD 418
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
M G +D A + +P++ DV W L++ +G ++E+ +LN+
Sbjct: 419 MYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQ 477
Query: 616 KSKAGLVPVNA 626
+ ++ A
Sbjct: 478 GTWVSILAAYA 488
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 240/404 (59%), Gaps = 15/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G EAIEV ++E +C + +P T+ ++ A AL++ +H V +
Sbjct: 258 ITGYAQNGLASEAIEVYKMME-ECKEI-IPNQGTWVSILPAYAHVGALQQGMKIHGRVIK 315
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L V ++ +Y +C + DA S+F + + +W+ +I+ +G E + +
Sbjct: 316 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 375
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+KPD F+ + SACS G V EG F M ++YGI PS+KHY +VD+LG
Sbjct: 376 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLG 434
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
GYL+ A +FI+ MP++PD +W L+ CR+HGN+ELG ++ + ++D +
Sbjct: 435 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 494
Query: 619 AGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ N + LA+E+ KK + +EV KV + G+ SHP+ +IY
Sbjct: 495 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 554
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+R L A+MK GYIP+ FVL D++++ KE L +HSERLA++ G++S+P ++PIRI KN
Sbjct: 555 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 614
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K IS+I RE+++RD+ RFHHFKDG+CSC DYW
Sbjct: 615 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS + MY++ +D A VF + +D+ SW+T+ITG+A+NGL +A++++ ++
Sbjct: 220 VSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEE 279
Query: 505 AG-LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ P+ ++ + A + +G + +GM +H + + + + ++D+ G G
Sbjct: 280 CKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL--DVFVATCLIDVYGKCGR 337
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
L +A+ ++P E V W +++ +HG+ E
Sbjct: 338 LVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE 370
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 13/213 (6%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ V G EAI LL I D TF +++ACG L + + +H +L
Sbjct: 88 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKL 144
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MYS A S+F +M RD+ SW+ MI+G +NG A+D+
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP--SMKHYVSIVDML 557
+ + G+K + F+ V S D+ + +S K + I+P + + +++
Sbjct: 205 DEMRLEGIKMN---FVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 261
Query: 558 GSTGYLDEALEFIEKM----PMEPDVDVWEKLM 586
G EA+E + M + P+ W ++
Sbjct: 262 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
AK L V V+ + R ++ +Y+ + + F + ++D+ +W++M
Sbjct: 35 AKCLHALLVVAGKVQSIFISTR------LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 88
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
I+ + NG +A+ F Q ++PD F V AC G +V+G +
Sbjct: 89 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGR-KIHCWAFKL 144
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G ++ S++ M G+ A + MP D+ W +++ +GN
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------A 197
Query: 602 AEIVEQLDPSRL-----NEKSKAGLVPVNASELAK 631
A+ ++ LD RL N + ++PV AK
Sbjct: 198 AQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAK 232
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 249/409 (60%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G+ KEA+E+ ++++ S ++ AC + A+++ + VH +++R
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L +L MY++C +D + VF M ER++ +W+ MI G A +G EDA+++FS
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ +KP+ +GV +AC+ G V +G+ F++M + YG+ P ++HY +VD+LG +
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------- 610
G EA + I MPM+P+ VW L+ CR+HGN +L +R +I+ +L+P
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 611 ------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
R ++ SK +L K++ K + +++++ VHE++ GD SHP+
Sbjct: 505 NIYAKVGRFDDVSK-------IRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMK 557
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY ++ ++ +++ AG+ P+T VL DID+E KE A+ HSE+LA++ GL+++ I
Sbjct: 558 EIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRI 617
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLRVC DCHSA K+IS+I RE+I+RD R+HHFK+G CSC+D+W
Sbjct: 618 HIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CG LE AK + + P++ + ++N ++ ++ ++ DA +F M+ERD S
Sbjct: 210 CG---VLEAAKGLFAQM-----PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W +M+ G+ G ++A++IF Q ++ +P I V +ACS +G + +G +
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLK 321
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++ I +++DM G LD E E+M E ++ W ++ +HG E
Sbjct: 322 RN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 258/441 (58%), Gaps = 21/441 (4%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
SG I +G + A +V +++D + + + G V G ++A+++ +
Sbjct: 378 SGYIDSGCLDKAVEVFKVMPYKNDLS----------WMVMVSGYVHGGLSEDALKLFNQM 427
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
+ + T++ + ACG+ AL+ + +H H+ + S N +L MY++C ++
Sbjct: 428 RAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAV 487
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+DA VF M D SW+ MI+ ++G G +A+++F Q G+ PD F+ + +AC
Sbjct: 488 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 547
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+ G V EG +FESM +D+GI P HY ++D+LG +G + EA + I+ MP EP +
Sbjct: 548 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 607
Query: 582 WEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRL---NEKSKAG--LVPVNASELAKE 632
WE +++ CR +G++E G D+ ++ Q D + + N S AG + +L ++
Sbjct: 608 WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 667
Query: 633 KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHD 692
+ KK + +EV SK+H + GDT HPE ++Y + + A+M++ GY+P+T+FVLHD
Sbjct: 668 RGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHD 727
Query: 693 IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELI 752
++ KE L AHSE+LAV GLL P A + ++KNLR+CGDCH+A+ +SK VGRE++
Sbjct: 728 MEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIV 787
Query: 753 IRDAKRFHHFKDGLCSCRDYW 773
+RD +RFHHFKDG CSC +YW
Sbjct: 788 VRDVRRFHHFKDGECSCGNYW 808
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V+ G +A E+ + + + +D TF+ ++ AC +A K+VH + RL
Sbjct: 271 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 330
Query: 440 --------------LSPLR--------------------VSTYNGILKMYSECDSMDDAF 465
L L V ++N IL Y + +D A
Sbjct: 331 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 390
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M ++ SW M++G+ GL EDA+ +F+Q + +KP D + G +AC LG
Sbjct: 391 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + + S + +++ M G +++A MP V W
Sbjct: 451 ALKHGRQLHAHLVQCGFEASNSAGN--ALLTMYAKCGAVNDARLVFLVMPNLDSVS-WNA 507
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSRLN 614
+++ HG+ LEL D+ + E +DP R++
Sbjct: 508 MISALGQHGHGREALELFDQ--MVAEGIDPDRIS 539
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 44/297 (14%)
Query: 331 YQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGK 390
++ +P+ G + S + A ++ + D A R + + + + +
Sbjct: 86 FRSDPDPGPVAATS-LVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAM--MSAFARASL 142
Query: 391 VKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS--PLRVST 447
A+ V LL + D +F+ L+ A G L H L S +S
Sbjct: 143 AAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSV 202
Query: 448 YNGILKMYSECDSMD---DAFSVFSNMTERDLTSWDTM---------------------- 482
N ++ +Y +CD+ + DA V M ++D +W TM
Sbjct: 203 SNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDG 262
Query: 483 ---------ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-L 532
I+G+ ++G+ DA ++F + + D+ F V SAC+ G V G +
Sbjct: 263 KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSV 322
Query: 533 HFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
H + + VP V ++V + G + A + M ++ DV W +++
Sbjct: 323 HGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILS 378
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 237/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ +EA+ + L++ + V+ + ++ AC AL++ K H ++E+
Sbjct: 213 MIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNK 272
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V+ ++ MY +C ++D A VF M E+++ +W T I G A NG G+ +++FS
Sbjct: 273 IQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFS 332
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K G+ P++ FI V CS +G V EG HF+SM +D+GI P ++HY +VD+ G
Sbjct: 333 FMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRA 392
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EAL FI MP++P W L+N CRM+ N+ELG+ + + +++ N +
Sbjct: 393 GRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGK--NHGAYVS 450
Query: 621 LVPV-----------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + N + K + KL +++EV +VHE+ +GD SHP D I +
Sbjct: 451 LSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETM 510
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ ++K AGY+ T VL DI++E KE+AL HSE++A++ GL S PIRI+KN
Sbjct: 511 WGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIAFGLFSLKEGLPIRIVKN 570
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH K+ISKI RE+I+RD RFHHFKDG CSC+D+W
Sbjct: 571 LRICWDCHDVSKMISKIFEREIIVRDRNRFHHFKDGECSCKDFW 614
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 45/290 (15%)
Query: 346 NIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
N N + ++Q+L+ C FA S + +L K+ ++ +V+
Sbjct: 55 NPTNLLYSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVM------- 107
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE-------- 457
S D TF+ L++ C + A E AVH + + +G++ MY+E
Sbjct: 108 -SPDNYTFNFLVRTCAQS-ACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCH 165
Query: 458 -----------------------CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
C + A ++F +M +RD SW+ MI G+A+ G +
Sbjct: 166 RVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSRE 225
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
A+++F + G+K ++ I V +AC+ LG + +G + K+ I ++ ++V
Sbjct: 226 ALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKN-KIQMTVNLGTALV 284
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
DM G +D AL+ +M E +V W + M+G G +C E+
Sbjct: 285 DMYFKCGNVDRALKVFWEMN-EKNVYTWSTAIGGLAMNG---YGQKCLEL 330
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 238/418 (56%), Gaps = 11/418 (2%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F E SR + T + G ++ G A+ V L+ + D TF+ L++A A
Sbjct: 1157 FGEISRPDEVAWT-TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
LE+ K +H +V +L L ++ MY +C S+ DA+ VF M R + W+ M+ G
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
A++G ++A+++F + G++PD FIGV SACS G E +F++M K YGI P
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
++HY +VD LG G + EA I MP + ++ L+ CR G+ E R A+ +
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Query: 606 EQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG 656
LDP S + S+ +A + K K KK + ++V++KVH +
Sbjct: 1396 LALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVD 1455
Query: 657 DTSHPETDKIYALIRGLRAQMKEAG-YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL 715
D SHP+ IY I L +++E G Y+P+T F L D+++E KE AL HSE+LA++ GL
Sbjct: 1456 DRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGL 1515
Query: 716 LSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+S+P A IR++KNLRVCGDCHSA+K ISK+ RE+++RDA RFHHF++G CSC DYW
Sbjct: 1516 ISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 8/216 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +K K ++A+E L+ + I +D T + ++A G L++ K + + +L
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ +G+L MY +C M +A +F ++ D +W TMI+G+ +NG + A+ ++ +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGST 560
+G++PD+ F + A S L + +G +H + DY S+ H+V S+VDM
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKC 1248
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G + +A KM + V W ++ HG+++
Sbjct: 1249 GSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
++L + G++ AI+ L + I D T ++ A A L+ + +H V +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V N ++ MYS+ + A F N E DL SW+TMI+ +A+N L +A+ F
Sbjct: 924 SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGD-----VVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ GLKPD V ACS GD + +H ++ GI+ +++
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACST-GDEGEYFTLGSQVHVYAIK--CGIINDSFVSTALI 1040
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
D+ G +DEA EF+ + D+ W +M
Sbjct: 1041 DLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
V E + GLL + S+ T + L++ C + ++ ++ VH + ++ L +
Sbjct: 698 VLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGA 757
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +Y + + A +F M ERD W+ M+ + +N ++A+ FS F ++G PD
Sbjct: 758 LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD 817
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACG---DAKALEEAKAVHEHVER--LLSPLRVST 447
EAI L + + D T + +++AC + + VH + + +++ VST
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ +YS+ MD+A + + DL SW+ ++ G+ K+ A++ FS + G+
Sbjct: 1038 --ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
D+ A L ++ +G ++ + G + ++DM G + AL
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGK-QIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
E ++ PD W +++ G +E GD
Sbjct: 1155 ELFGEIS-RPDEVAWTTMIS-----GYIENGD 1180
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
N ++ MYS+C S+ A VF ++RDL +W++++ +A+
Sbjct: 650 NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 223/375 (59%), Gaps = 14/375 (3%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P+ ++ C L+ + VH + R + V + ++ MY +C ++D A VF
Sbjct: 334 PSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT 393
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ W++MITG+A++GLGE A+ IF + AG+ PD +IG +ACS G V EG
Sbjct: 394 FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEG 453
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F SM+ + I P +HY +VD+LG +G ++EA + I+ MP+EPD +W LM CR
Sbjct: 454 REIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACR 513
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE---KENKKLASQNL---- 643
MH N E+ + A+ + +L+P N L + S E K K ++S+NL
Sbjct: 514 MHRNAEIAEFAAKKLLELEPG--NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 644 ----LEVRSKVHEYRAGDT-SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+E +VH + +GD +HPE I ++ L + E+GY + FVLHDID+E K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+L HSER AV++GLL P PIR+MKNLRVCGDCHSA+K+I+KI RE+I+RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANR 691
Query: 759 FHHFKDGLCSCRDYW 773
FHHFKDG CSCRDYW
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ + + +D A +VF M ERD +W MI + +N +A+ F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P+ I + + C+AL + G +H + + + + +++ M G L
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM--DVFAVSALITMYIKCGNL 384
Query: 564 DEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
D+A EP D+ +W ++ HG LG++ I + RL S G+
Sbjct: 385 DKAKRVFHT--FEPKDIVMWNSMITGYAQHG---LGEQALGIFHDM---RLAGMSPDGIT 436
Query: 623 PVNA----SELAKEKENKKL 638
+ A S K KE +++
Sbjct: 437 YIGALTACSYTGKVKEGREI 456
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G + +AI + +Q + +++ L+ DA + EA+ + + +
Sbjct: 119 LRGYVRHGLLADAIRLF----QQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----- 169
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R V + +L Y + + +A ++F M +R++ SW MI+G+A+NG A +F
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML--- 557
+ + +G A H E ++ + +P +H V+ + +
Sbjct: 230 VMPERNEVSWTAMLVGYIQAG-----------HVEDAAELFNAMP--EHPVAACNAMMVG 276
Query: 558 -GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G G +D A EKM E D W ++
Sbjct: 277 FGQRGMVDAAKTVFEKM-CERDDGTWSAMIK 306
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/418 (38%), Positives = 238/418 (56%), Gaps = 11/418 (2%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F E SR + T + G ++ G A+ V L+ + D TF+ L++A A
Sbjct: 1157 FGEISRPDEVAWT-TMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
LE+ K +H +V +L L ++ MY +C S+ DA+ VF M R + W+ M+ G
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
A++G ++A+++F + G++PD FIGV SACS G E +F++M K YGI P
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
++HY +VD LG G + EA I MP + ++ L+ CR G+ E R A+ +
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395
Query: 606 EQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG 656
LDP S + S+ +A + K K KK + ++V++KVH +
Sbjct: 1396 LALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVD 1455
Query: 657 DTSHPETDKIYALIRGLRAQMKEAG-YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL 715
D SHP+ IY I L +++E G Y+P+T F L D+++E KE AL HSE+LA++ GL
Sbjct: 1456 DRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGL 1515
Query: 716 LSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+S+P A IR++KNLRVCGDCHSA+K ISK+ RE+++RDA RFHHF++G CSC DYW
Sbjct: 1516 ISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 8/216 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +K K ++A+E L+ + I +D T + ++A G L++ K + + +L
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ +G+L MY +C M +A +F ++ D +W TMI+G+ +NG + A+ ++ +
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGST 560
+G++PD+ F + A S L + +G +H + DY S+ H+V S+VDM
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKC 1248
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G + +A KM + V W ++ HG+++
Sbjct: 1249 GSVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHGHVD 1283
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
++L + G++ AI+ L + I D T ++ A A L+ + +H V +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V N ++ MYS+ + A F N E DL SW+TMI+ +A+N L +A+ F
Sbjct: 924 SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGD-----VVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ GLKPD V ACS GD + +H ++ GI+ +++
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACST-GDEGEYFTLGSQVHVYAIK--CGIINDSFVSTALI 1040
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
D+ G +DEA EF+ + D+ W +M
Sbjct: 1041 DLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
V E + GLL + S+ T + L++ C + ++ ++ VH + ++ L +
Sbjct: 698 VLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGA 757
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +Y + + A +F M ERD W+ M+ + +N ++A+ FS F ++G PD
Sbjct: 758 LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD 817
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACG---DAKALEEAKAVHEHVER--LLSPLRVST 447
EAI L + + D T + +++AC + + VH + + +++ VST
Sbjct: 978 EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ +YS+ MD+A + + DL SW+ ++ G+ K+ A++ FS + G+
Sbjct: 1038 --ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
D+ A L ++ +G ++ + G + ++DM G + AL
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGK-QIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
E ++ PD W +++ G +E GD
Sbjct: 1155 ELFGEIS-RPDEVAWTTMIS-----GYIENGD 1180
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
N ++ MYS+C S+ A VF ++RDL +W++++ +A+
Sbjct: 650 NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 243/398 (61%), Gaps = 23/398 (5%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+AI+V ++ + + D TF ++ AC A E + VH+ + P+ V+ +
Sbjct: 210 KKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAV 269
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y +C +D+A ++F ++ +++ +W ++ +A+NG +A++++ + Q GL+ +
Sbjct: 270 MHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNG 329
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+G+ ACS G ++G+ +F SM +D+G+VP +HY++++D+LG +G L + + I
Sbjct: 330 ITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLIN 389
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS----------------RLNE 615
MP EPD W L+ CRMHG+++ G R AE++ +LDP R++E
Sbjct: 390 SMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDE 449
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+ A L + L+S +EV+ +VHE+ A HP+ +I+A I L+A
Sbjct: 450 ARRTR----KAMRLRGITKQPGLSS---IEVKDRVHEFMAAQKLHPQLGRIHAEIERLKA 502
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++KEAGY+ + R VL D+++E KE+ L HSERLA++ GL+S+P + I+KNLRVC D
Sbjct: 503 RVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFD 562
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A+K ISK+VGR++++RDA RFHHF++G CSC DYW
Sbjct: 563 CHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHV-------ERLLSPLRVSTYNGILKMYSECDSM 461
++ T+ L++ C D+KAL E K VH + +RL++ N +++MY +C +
Sbjct: 23 EISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIA-------NLLIEMYGKCGGI 75
Query: 462 DDAFSVFSNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+A SVF + E+ D+ SW+ +I + +NGLG++A+ +F G+ + I
Sbjct: 76 AEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAID 135
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
AC++L EG + +++ D + S+V+M G +D A + +P
Sbjct: 136 ACASLPSEEEGRI-VHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLP 189
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYN 449
KEA+ + ++ + + + T + AC + EE + VH +RL S V T
Sbjct: 109 KEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGT-- 166
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ M+ +C ++D A +VF ++ ++L +W+ M+ +++N + A+ +F G++P
Sbjct: 167 SLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQP 226
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F+ + AC+AL EG + + ++ GI + +++ G G LD A
Sbjct: 227 DAVTFLTIIDACAALAAHTEGRMVHDDITAS-GIPMDVALGTAVMHFYGKCGRLDNARAI 285
Query: 570 IEKMPMEPDVDVWEKLM 586
+ + + V W ++
Sbjct: 286 FDSLGKKNTV-TWSAIL 301
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 223/374 (59%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ C L+ K +H R L S N I+ MY+ S A +F +
Sbjct: 327 TLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQV 386
Query: 472 TERDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R T +W +MI A++G GE+AV +F + +AG++PD ++GV SACS G V EG
Sbjct: 387 CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 446
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+++ + ++ I P M HY +VD+L G EA EFI +MP+EPD W L++ CR
Sbjct: 447 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACR 506
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLA 639
+H N EL + AE + +DP+ N + + + V ++ + KEK +K
Sbjct: 507 VHKNAELAELAAEKLLSIDPN--NSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKET 564
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +RSK+H + A D HP+ D +YA+ + ++K AG++P+ + VLHD+D E KE
Sbjct: 565 GFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKE 624
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA++ GL+S+P + +R+MKNLRVC DCH+A+K ISK+ RE+I+RDA RF
Sbjct: 625 ELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRF 684
Query: 760 HHFKDGLCSCRDYW 773
HHF+DGLCSC+DYW
Sbjct: 685 HHFRDGLCSCKDYW 698
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CGD+ E A V E + P+R VS++N ++ + + MD A S+F +M +R + S
Sbjct: 106 CGDS---ETATTVFERM-----PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVS 157
Query: 479 WDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
W+ MI G+ +NGL A+ +FS+ ++ + PD+ V SAC+ LG+V G
Sbjct: 158 WNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG 210
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
M+++ + DA VF+ M ERD SW M+ G + G +A+ G P
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 514 FIGVFSACSAL-GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
V S+C+ V +H S G+ + S+++M G G + A E+
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVH--SFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGD 599
MP+ V W +++L G ++L +
Sbjct: 119 MPVR-SVSSWNAMVSLNTHLGRMDLAE 144
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 237/394 (60%), Gaps = 18/394 (4%)
Query: 396 EVLGLLEKQC-----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
E +GL K I + S ++ AC A A++ K +H V R+ V
Sbjct: 283 EAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTS 342
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I+ MYS+C ++ A F + E+++ SW MITG+ +G G++A++IF++ K++GL+P+
Sbjct: 343 IVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN 402
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
FI V +ACS G + EG + +M +++GI ++HY +VD+LG G LDEA I
Sbjct: 403 YITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLI 462
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-- 628
++M ++PD +W L++ CR+H N+EL + + + +LD S N L + A
Sbjct: 463 KEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS--NSGYYVLLSNIYAEARM 520
Query: 629 ---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L K + +K + E++ K++ + GD SHP+ +IY+ + L +M+E
Sbjct: 521 WKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQE 580
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY+P T VLHD+D+E KE AL HSE+LAV+ L++S R+ I I+KNLRVC DCH+A
Sbjct: 581 AGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTA 640
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K I+KI RE+IIRD +RFHHFKDGLCSCRDYW
Sbjct: 641 MKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 447 TYNGILKMYSECDSMD--DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
N +L Y++ S D A VF M ERD+ SW++MI +A+NG+ +A+ ++S+
Sbjct: 235 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 293
Query: 505 A--GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G+K + V AC+ G + G + G+ ++ SIVDM G
Sbjct: 294 VGGGIKCNAVALSAVLLACAHAGAIQTGK-RIHNQVVRMGLEENVYVGTSIVDMYSKCGR 352
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
++ A K+ E ++ W ++ MHG G EI ++ S L
Sbjct: 353 VEMASRAFRKIK-EKNILSWSAMITGYGMHGR---GQEALEIFTEMKRSGL 399
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 230/384 (59%), Gaps = 23/384 (5%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHV-------ERLLSPLRVSTYNGILKMYSEC 458
+ + TF+ L+ A L + + +H +R +S N ++ MYS C
Sbjct: 446 VGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVS-------NSLVSMYSRC 498
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
++DA F+ + +R++ SW +MI+G AK+G E A+ +F G+KP+D +I V
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
SACS +G V EG +F SM +D+G++P M+HY +VD+L +G + EALEFI +MP++ D
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKAD 618
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAK 631
VW+ L+ CR H N+E+G+ A+ V +L+P N + AGL A +
Sbjct: 619 ALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSA 678
Query: 632 EKENK--KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
++N K + +EV + HE+RAGDTSHP IY + L Q+K GY+P+T V
Sbjct: 679 MRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIV 738
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
LHD+ E KE+ LL HSE++AV+ GL+++ A PIRI KNLRVC DCHSA+K +SK R
Sbjct: 739 LHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRR 798
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E+I+RD+ RFH KDG CSC +YW
Sbjct: 799 EIILRDSNRFHRMKDGECSCGEYW 822
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ + ++ M + + A VF + E+ + W +I+ + + E+AV++F F +
Sbjct: 188 VAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLE 247
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY-- 562
G +PD + SAC+ LG V G L S++ G+ +VDM +
Sbjct: 248 DGFEPDRYTMSSMISACTELGSVRLG-LQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 563 -LDEALEFIEKMPMEPDVDVWEKLMN 587
+D A + E+MP + DV W L++
Sbjct: 307 AMDYANKVFERMP-KNDVISWTALIS 331
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+E+ + D T S ++ AC + ++ +H R+ G+
Sbjct: 236 EEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGL 295
Query: 452 LKMYSECD---SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV-DIFSQFKQAGL 507
+ MY++ + +MD A VF M + D+ SW +I+G+ ++G+ E+ V +F + +
Sbjct: 296 VDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESI 355
Query: 508 KPDDQIFIGVFSACSALGD 526
KP+ + + +C+++ D
Sbjct: 356 KPNHITYSSILKSCASISD 374
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N +L +YS C ++ A +VF M RD+ SW M + A+NG ++ + + ++GL
Sbjct: 88 NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGL 147
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS-MKHYVSIVDMLGSTGYLDEA 566
P+ AC + G+ + + +++DML G L A
Sbjct: 148 LPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASA 207
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+ + + +E V VW L++
Sbjct: 208 RKVFDGL-IEKTVVVWTLLIS 227
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+E KV + + G + + I + T+S ++++C + + VH HV +
Sbjct: 338 VQENKV---MALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAH 394
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ N ++ MY+E M++A VF+ + ER + T F + + +
Sbjct: 395 TVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLD----------HRIVRM 444
Query: 506 GLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGY 562
+ F + SA +++G + +G LH S+ +G +V S+V M GY
Sbjct: 445 DVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFG----SDRFVSNSLVSMYSRCGY 500
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
L++A ++ + +V W +++ HG E
Sbjct: 501 LEDACRSFNELK-DRNVISWTSMISGLAKHGYAE 533
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 255/457 (55%), Gaps = 37/457 (8%)
Query: 340 YQSYSGNIQNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKE 388
YQ Y G + N ++ A++V C ED A S + +
Sbjct: 421 YQ-YDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTS----------MITAYSQY 469
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVS 446
G +EA+++ ++ + I D FS L AC + A E+ K +H HV + LLS V
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSD--VF 527
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY++C S+DDA +F+ ++ R + SW MI G A++G G A+ +F Q + G
Sbjct: 528 AGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNG 587
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ P+ + V SAC+ G V E F M K +GI P+ +HY +VD+LG G LDEA
Sbjct: 588 ILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEA 647
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKA 619
+ +++MP + VW L+ R+H N+ELG AE++ L+P + N +
Sbjct: 648 MVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYAST 707
Query: 620 GLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
G+ N +++ + +N KK + +E++ KV+ + GD SHP + +IY + LR +
Sbjct: 708 GMWD-NVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRER 766
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+ AGY+P LHD++Q KE+ L HSE+LAV+ GL+++P APIR+ KNLRVC DC
Sbjct: 767 LTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDC 826
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K ISK+ RE+I+RD RFHHF+DG CSC DYW
Sbjct: 827 HTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 33/241 (13%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V K A+++LG + ++ + T S ++AC ++ + +H + ++
Sbjct: 261 IAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDM 320
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MYS+C + DA VF M +D+ W+++I+G++ G +A+ +F+
Sbjct: 321 EPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTN 380
Query: 502 FKQAGLKPDDQIFIGVFSA---------CSAL------------GDVVEGMLH------- 533
+ GL+ + + + C + G V +L
Sbjct: 381 MYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCL 440
Query: 534 FESMSKDYGIVPS--MKHYVSIVDMLGSTGYLDEALEFIEKM---PMEPDVDVWEKLMNL 588
E +K + + P+ + Y S++ G +EAL+ +M ++PD ++ L N
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500
Query: 589 C 589
C
Sbjct: 501 C 501
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++ AC + VH ++ +L + N +L MY++ + A +VF +
Sbjct: 190 SLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI 249
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
+ D+ SW+ +I G + + A+ + + + P AC+A+G V G
Sbjct: 250 PKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGR 309
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
LH M D + P V ++DM G L +A + MP + DV VW +++
Sbjct: 310 QLHSALMKMD--MEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIIS 363
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 47/221 (21%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ +L+ +K + A+H R++ + N ++ +YS+C A + + +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHA---RIIRLGLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 473 ERDLTSWDTMITGFAKNGLGEDA------------------------------------- 495
E DL SW +I+G+ +NG GE+A
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 496 ---VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV 551
V + ++ G+ P++ V +AC+ L D GM +H + Y P +
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSAN-- 227
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+++DM +G + A+ ++P +PD+ W ++ C +H
Sbjct: 228 ALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLH 267
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 248/409 (60%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G+ KEA+E+ ++++ S ++ AC + A+++ + VH +++R
Sbjct: 265 MVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNS 324
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L +L MY++C +D + VF M ER++ +W+ MI G A +G EDA+++FS
Sbjct: 325 IKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFS 384
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ +KP+ +GV +AC+ G V +G+ F++M + YG+ P ++HY +VD+LG +
Sbjct: 385 KLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRS 444
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------- 610
G EA + I MPM+P+ VW L+ CR+HGN +L +R +I+ +L+P
Sbjct: 445 GLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLS 504
Query: 611 ------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
R ++ SK +L K + K + +++++ VHE++ GD SHP+
Sbjct: 505 NIYAKVGRFDDVSK-------IRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMK 557
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY ++ ++ +++ AG+ P+T VL DID+E KE A+ HSE+LA++ GL+++ I
Sbjct: 558 EIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRI 617
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLRVC DCHSA K+IS+I RE+I+RD R+HHFK+G CSC+D+W
Sbjct: 618 HIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CG LE AK + + P++ + ++N ++ ++ ++ DA +F M+ERD S
Sbjct: 210 CG---VLEAAKGLFAQM-----PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEIS 261
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W +M+ G+ G ++A++IF Q ++ +P I V +ACS +G + +G +
Sbjct: 262 WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLK 321
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++ I +++DM G LD E E+M E ++ W ++ +HG E
Sbjct: 322 RN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAE 377
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 243/430 (56%), Gaps = 19/430 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A V N DD A S + G V G +A+ + + + + D T
Sbjct: 1161 AGIVFNYISAPDDVAWTS----------MISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 1210
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ L++A ALE+ + +H +V +L ++ MY++C +++DA+ +F M
Sbjct: 1211 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 1270
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ W+ M+ G A++G E+AV++F K G++PD FIG+ SACS G E
Sbjct: 1271 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 1330
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+ SM DYGI P ++HY +VD LG G + EA + IE MP + + L+ CR+
Sbjct: 1331 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 1390
Query: 593 GNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNL 643
G++E G R A + L+P S + + +A ++ K K KK +
Sbjct: 1391 GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 1450
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
++V++ +H + D SHP+ D IY + + ++E GY+P+T FVL D++ E KE +L
Sbjct: 1451 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 1510
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE+LA+++GL+S+PA IR++KNLRVCGDCH+A+K ISK+ RE+++RDA RFHHF+
Sbjct: 1511 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 1570
Query: 764 DGLCSCRDYW 773
DG+CSC DYW
Sbjct: 1571 DGVCSCGDYW 1580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 10/260 (3%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLE------QLDGLVKEGKVKEAIEV 397
+GNI + +A+ +++ EA QN L+ + G + K+A+E+
Sbjct: 1035 TGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALEL 1094
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L+ K D T + +ACG L++ K +H H + + +GIL MY +
Sbjct: 1095 FSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIK 1154
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C M +A VF+ ++ D +W +MI+G NG + A+ I+ + +Q+ + PD+ F +
Sbjct: 1155 CGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATL 1214
Query: 518 FSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
A S + + +G LH + D P + S+VDM G +++A +KM +
Sbjct: 1215 IKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR 1272
Query: 577 PDVDVWEKLMNLCRMHGNLE 596
++ +W ++ HGN E
Sbjct: 1273 -NIALWNAMLVGLAQHGNAE 1291
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+G +E + + LL S T + +++ C ++ L A+ VH + ++ V
Sbjct: 705 DGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFV 764
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ +YS+C M DA +F M ERD+ W+ M+ G+ + GL ++A +FS+F ++GL
Sbjct: 765 SGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 824
Query: 508 KPDD 511
+PD+
Sbjct: 825 RPDE 828
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
AIE + I D T ++ A LE K VH + VS N ++
Sbjct: 888 AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+ A VF++M DL SW++MI+ A++ L E++V++F GLKPD
Sbjct: 948 MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFT 1007
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
V ACS+L D + + G + +++D+ +G ++EA EF+ +
Sbjct: 1008 LASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEA-EFLFQN 1066
Query: 574 PMEPDVDVWEKLM 586
+ D+ W +M
Sbjct: 1067 KDDLDLACWNAMM 1079
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
N +L MYS+C S+ A VF ERDL +W+ ++ +A
Sbjct: 660 NNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 237/394 (60%), Gaps = 18/394 (4%)
Query: 396 EVLGLLEKQC-----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
E +GL K I + S ++ AC A A++ K +H V R+ V
Sbjct: 282 EAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTS 341
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I+ MYS+C ++ A F + E+++ SW MITG+ +G G++A++IF++ K++GL+P+
Sbjct: 342 IVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN 401
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
FI V +ACS G + EG + +M +++GI ++HY +VD+LG G LDEA I
Sbjct: 402 YITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLI 461
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-- 628
++M ++PD +W L++ CR+H N+EL + + + +LD S N L + A
Sbjct: 462 KEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS--NSGYYVLLSNIYAEARM 519
Query: 629 ---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L K + +K + E++ K++ + GD SHP+ +IY+ + L +M+E
Sbjct: 520 WKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQE 579
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY+P T VLHD+D+E KE AL HSE+LAV+ L++S R+ I I+KNLRVC DCH+A
Sbjct: 580 AGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTA 639
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K I+KI RE+IIRD +RFHHFKDGLCSCRDYW
Sbjct: 640 MKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 447 TYNGILKMYSECDSMD--DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
N +L Y++ S D A VF M ERD+ SW++MI +A+NG+ +A+ ++S+
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292
Query: 505 A--GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G+K + V AC+ G + G + G+ ++ SIVDM G
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGK-RIHNQVVRMGLEENVYVGTSIVDMYSKCGR 351
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
++ A K+ E ++ W ++ MHG G EI ++ S L
Sbjct: 352 VEMASRAFRKIK-EKNILSWSAMITGYGMHGR---GQEALEIFTEMKRSGL 398
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 239/404 (59%), Gaps = 15/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G EAIEV ++E +C + +P T+ ++ A AL++ +H V +
Sbjct: 491 ITGYAQNGLASEAIEVYKMME-ECKEI-IPNQGTWVSILPAYAHVGALQQGMRIHGRVIK 548
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L V ++ +Y +C + DA S+F + + +W+ +I+ +G E + +
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+KPD F+ + SACS G V EG F M ++YGI PS+KHY +VD+LG
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLG 667
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
GYL+ A FI+ MP++PD +W L+ CR+HGN+ELG ++ + ++D +
Sbjct: 668 RAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 619 AGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ N + LA+E+ KK + +EV KV + G+ SHP+ +IY
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+R L A+MK GYIP+ FVL D++++ KE L +HSERLA++ G++S+P ++PIRI KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K IS+I RE+++RD+ RFHHFKDG+CSC DYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER---LLSPLRVSTYNGILKMYSECDSMDDAF 465
DL T L ++ + +++VH + R L+ + + N ++ MY++ +D A
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG--NAVVDMYAKLGLLDSAH 473
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSAL 524
VF + +D+ SW+T+ITG+A+NGL +A++++ ++ + P+ ++ + A + +
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 525 GDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
G + +GM +H + + + + ++D+ G G L +A+ ++P E V W
Sbjct: 534 GALQQGMRIHGRVIKTNLHL--DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWN 590
Query: 584 KLMNLCRMHGNLE 596
+++ +HG+ E
Sbjct: 591 AIISCHGIHGHAE 603
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ V G EAI LL I D TF +++ACG L + + +H +L
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKL 244
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MYS A S+F +M RD+ SW+ MI+G +NG A+D+
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+K + + + C LGD+ ML + K +G+ + ++++M
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIK-HGLEFDLFVSNALINMYAK 363
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L++A + ++M + DV W ++
Sbjct: 364 FGNLEDARKAFQQMFIT-DVVSWNSII 389
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL++ G +A++VL + + I ++ T ++ C + A +H +V +
Sbjct: 287 MISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHG 346
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++ +++DA F M D+ SW+++I + +N A F
Sbjct: 347 LEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFV 406
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + G +PD + + S + D V G + + ++ + ++VD
Sbjct: 407 KMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN-----AVVD 461
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M G LD A + E + ++ DV W L+
Sbjct: 462 MYAKLGLLDSAHKVFEIILVK-DVISWNTLIT 492
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
AK L V V+ + R ++ +Y+ + + F + ++D+ +W++M
Sbjct: 135 AKCLHALLVVAGKVQSIFISTR------LVNLYANLGDVSLSRCTFDQIPQKDVYTWNSM 188
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
I+ + NG +A+ F Q ++PD F V AC G +V+G +
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGR-RIHCWAFKL 244
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G ++ S++ M G+ A + MP D+ W +++ +GN
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGN------A 297
Query: 602 AEIVEQLDPSRL-----NEKSKAGLVPV 624
A+ ++ LD RL N + ++PV
Sbjct: 298 AQALDVLDEMRLEGIKMNFVTVVSILPV 325
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 223/375 (59%), Gaps = 14/375 (3%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P+ ++ C L+ + VH + R + V + ++ MY +C ++D A VF
Sbjct: 334 PSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT 393
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ W++MITG+A++GLGE A+ IF + AG+ PD +IG +ACS G V EG
Sbjct: 394 FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEG 453
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F SM+ + I P +HY +VD+LG +G ++EA + I+ MP+EPD +W LM CR
Sbjct: 454 REIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACR 513
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE---KENKKLASQNL---- 643
MH N E+ + A+ + +L+P N L + S E K K ++S+NL
Sbjct: 514 MHRNAEIAEVAAKKLLELEPG--NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSP 571
Query: 644 ----LEVRSKVHEYRAGDT-SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+E +VH + +GD +HPE I ++ L + E+GY + FVLHDID+E K
Sbjct: 572 GCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQK 631
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+L HSER AV++GLL P PIR+MKNLRVCGDCHSA+K+I+KI RE+++RDA R
Sbjct: 632 SHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANR 691
Query: 759 FHHFKDGLCSCRDYW 773
FHHFKDG CSCRDYW
Sbjct: 692 FHHFKDGFCSCRDYW 706
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ + + +D A +VF M ERD +W MI + +N +A+ F +
Sbjct: 267 VAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLW 326
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P+ I + + C+AL + G +H + + + + +++ M G L
Sbjct: 327 RGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDM--DVFAVSALITMYIKCGNL 384
Query: 564 DEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
D+A EP D+ +W ++ HG LG++ I + RL S G+
Sbjct: 385 DKAKRVFHT--FEPKDIVMWNSMITGYAQHG---LGEQALGIFHDM---RLAGMSPDGIT 436
Query: 623 PVNA----SELAKEKENKKL 638
+ A S K KE +++
Sbjct: 437 YIGALTACSYTGKVKEGREI 456
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G + +AI + +Q + +++ L+ DA + EA+ + + +
Sbjct: 119 LRGYVRHGLLADAIRLF----QQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----- 169
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R V + +L Y + + +A ++F M +R++ SW MI+G+A+NG A +F
Sbjct: 170 PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFE 229
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML--- 557
+ + +G A H E ++ + +P +H V+ + +
Sbjct: 230 VMPERNEVSWTAMLVGYIQAG-----------HVEDAAELFNAMP--EHPVAACNAMMVG 276
Query: 558 -GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G G +D A EKM E D W ++
Sbjct: 277 FGQRGMVDAAKTVFEKM-RERDDGTWSAMIK 306
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 248/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ ++A+EVL ++ + T + ++ AC + ++L K +H ++ R
Sbjct: 287 IGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWF 346
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++T ++ MY++C ++ + VFS MT+RD SW+TMI + +G GE+A+ +F +
Sbjct: 347 FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFRE 406
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++P+ F GV S CS V EG+L F+SMS+D+ + P H+ +VD+L G
Sbjct: 407 MVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAG 466
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA EFI+KMP+EP W L+ CR++ N+ELG A + +++
Sbjct: 467 RLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSN 526
Query: 622 VPVNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ V+A ++ E +KL + ++VR++VH + GD S+ ++D+IY +
Sbjct: 527 ILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDY 586
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +M+ AGY+P T FVL D+DQE KEE L HSE+LAV+ G+L+ + IR+ KNLR+
Sbjct: 587 MGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRI 646
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K ++KIVG ++I+RD+ RFHHF+DGLCSC+D+W
Sbjct: 647 CGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Query: 382 LDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ L K G+ EAI+ K C+ D + +AC + + AK VHE R
Sbjct: 49 ISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFG 108
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY +C + A VF M RD+ SW +M + + GL +A+ F
Sbjct: 109 FCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFR 168
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ G +P+ + AC+ L D+ G
Sbjct: 169 KMGLNGERPNSVTVSSILPACTDLKDLKSG 198
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 50/244 (20%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LG K ++ + P T S ++ AC D K L+ + VH V R V + ++
Sbjct: 162 EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALV 221
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMIT---------------------------- 484
MY+ C S+ A VF +M+ RD SW+ +IT
Sbjct: 222 NMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYA 281
Query: 485 -------GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGML 532
G +NG E A+++ S+ + +G KP+ V AC+ L G + G +
Sbjct: 282 SWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYI 341
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+D + ++V M G L+ + M + D W ++ MH
Sbjct: 342 FRHWFFQD------LTTTTALVFMYAKCGDLELSRRVFSMMT-KRDTVSWNTMIIATSMH 394
Query: 593 GNLE 596
GN E
Sbjct: 395 GNGE 398
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPD 510
+K+YS + A +F + + DL +W +I+ K+G +A+ ++ F+ ++PD
Sbjct: 18 IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + V AC++L DV+ E + +G + +++DM G + A
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIR-FGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 571 EKMPMEPDVDVWEKL 585
E MP DV W +
Sbjct: 137 EGMPFR-DVISWTSM 150
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 223/374 (59%), Gaps = 23/374 (6%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ ACG+ AL + + H +V + + I+ MYS+C S+D A +F +D
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKD 649
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
L W MI + +G G A+D+F Q +AG++P F V SACS G + EG ++F+
Sbjct: 650 LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 709
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M++++ I + +Y +VD+LG G L EA++ IE MP+EPD +W L+ CR+H NL
Sbjct: 710 LMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNL 769
Query: 596 ELGDRCAEIVEQLDP----------------SRLNEKSKAGLVPVNASELAKEKENKKLA 639
+L ++ A+ + LDP SR NE K ++ + K+
Sbjct: 770 DLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKV-------RKMMARRGANKIQ 822
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+L+E ++VH++ GD SHP+ +K+YA + L A MK GY+P T FVLHDI++E KE
Sbjct: 823 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKE 882
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
AL HSERLA++ GL+++ +RI KNLR+CGDCH+A+K+ISKIV R +++RD RF
Sbjct: 883 AALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRF 942
Query: 760 HHFKDGLCSCRDYW 773
H F+DG+CSC DYW
Sbjct: 943 HRFEDGVCSCGDYW 956
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Query: 337 EGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIE 396
E +++ S + + + A V N + + + + L G + G +++
Sbjct: 265 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMG 324
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKM 454
V + I D +++ A + ++A +H +V R S + + G ++++
Sbjct: 325 VFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR--SGFNSNVFVGASLIEL 382
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
YS+C S+ DA +F M RD+ W +MI + +G G +A++IF Q Q
Sbjct: 383 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEA-KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
D+ ++S ++ + +A EA HE +E+ P V+ + L+ + ++++ +
Sbjct: 236 DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA-LQACAVSRNLEEGKKI 294
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
+D+ SW +++G+A+NG+ ++ +F G++PD + + +A S LG +
Sbjct: 295 HKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG-I 353
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ L G ++ S++++ G L +A++ + M + DV +W ++
Sbjct: 354 FQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIA 412
Query: 588 LCRMHGNLELGDRCAEIVEQL 608
+HG G EI +Q+
Sbjct: 413 AYGIHGR---GGEALEIFDQM 430
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y++ A ++FS M E+D+ SW TMI +A N +A+++F + + +
Sbjct: 210 NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFE 269
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKD 540
P+ + AC+ ++ EG +H ++ KD
Sbjct: 270 PNSVTVVSALQACAVSRNLEEGKKIHKIAVWKD 302
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 103/262 (39%), Gaps = 49/262 (18%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVER 438
L +E + +E + + L+ C + + P T ++AC + LE K +H ++
Sbjct: 74 LRSYCREKQWEETLRLFHLM--ICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKK 131
Query: 439 ---LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
+ S + V + ++++YS+C M +A VF D W +M+TG+ +N E+A
Sbjct: 132 NDEIGSDMFVGS--ALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +FSQ M+ + D +V S+ ++
Sbjct: 190 LALFSQ-----------------------------MVMMDCFDGDLPLVNSL------LN 214
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+ TG A KMP E DV W ++ + N E + + ++ R
Sbjct: 215 LYAKTGCEKIAANLFSKMP-EKDVISWSTMIAC---YANNEAANEALNLFHEMIEKRFEP 270
Query: 616 KSKAGLVPVNASELAKEKENKK 637
S + + A +++ E K
Sbjct: 271 NSVTVVSALQACAVSRNLEEGK 292
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
R+ T I MY + +D A VF ++ W+ MI GFA +G +++++S+
Sbjct: 512 RILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM 569
Query: 504 QAGLKPDDQIFI-------GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+ GLKPD+ I V AC LG + +G F S G + +I+DM
Sbjct: 570 EKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEW-FHSYVIQTGFEFDILVATAIMDM 628
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G LD A ++ + D+ W ++ +HG+ G + ++ +Q+
Sbjct: 629 YSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGH---GRKAIDLFDQM-------- 676
Query: 617 SKAGLVP 623
KAG+ P
Sbjct: 677 VKAGVRP 683
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 228/378 (60%), Gaps = 23/378 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-------ERLLSPLRVSTYNGILKMYSECDSMDDA 464
TF+ L+ A L + + +H +R +S N ++ MYS C ++DA
Sbjct: 452 TFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVS-------NSLVSMYSRCGYLEDA 504
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
F+ + +R++ SW +MI+G AK+G E A+ +F G+KP+D +I V SACS +
Sbjct: 505 CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHV 564
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V EG +F SM +D+G++P M+HY +VD+L +G + EALEFI +MP++ D VW+
Sbjct: 565 GLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKT 624
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKENK- 636
L+ CR H N+E+G+ A+ V +L+P N + AGL A + ++N
Sbjct: 625 LLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684
Query: 637 -KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
K + +EV + HE+RAGDTSHP IY + L ++K GY+P+T VLHD+
Sbjct: 685 NKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSD 744
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE+ LL HSE++AV+ GL+++ A PIRI KNLRVC DCHSA+K +SK RE+I+RD
Sbjct: 745 ELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRD 804
Query: 756 AKRFHHFKDGLCSCRDYW 773
+ RFH KDG CSC +YW
Sbjct: 805 SNRFHRMKDGECSCGEYW 822
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
++ + ++ M + + A VF + E+ + W +I+ + + E+AV+IF F +
Sbjct: 188 IAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLE 247
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY-- 562
G +PD + SAC+ LG V G L S++ G +VDM +
Sbjct: 248 DGFEPDRYTMSSMISACTELGSVRLG-LQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 563 -LDEALEFIEKMPMEPDVDVWEKLMN 587
+D A + E+M + DV W L++
Sbjct: 307 AMDYANKVFERMR-KNDVISWTALIS 331
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N +L +YS C ++ A +VF M RD+ SW M + A+NG +++ + + ++GL
Sbjct: 88 NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGL 147
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS-MKHYVSIVDMLGSTGYLDEA 566
P+ V AC + G+ + + +++DML G L A
Sbjct: 148 LPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASA 207
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+ + + +E V VW L++
Sbjct: 208 RKVFDGL-IEKTVVVWTLLIS 227
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G + + VL G + + I + T+S +++AC + + + VH HV +
Sbjct: 330 ISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSN 389
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY+E M++A VF+ + ER + S T G DA +
Sbjct: 390 QAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITE---------GRDA-PLDH 439
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDML 557
+ + + F + SA +++G + +G LH ++ +G +V S+V M
Sbjct: 440 RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFG----SDRFVSNSLVSMY 495
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
GYL++A ++ + +V W +++ HG E
Sbjct: 496 SRCGYLEDACRSFNELK-DRNVISWTSMISGLAKHGYAE 533
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 229/383 (59%), Gaps = 10/383 (2%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
+E+ + + TF L+ A L + + +H + + N ++ MYS C
Sbjct: 447 IERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGY 506
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ DA VF M + ++ SW +MI+G AK+G A+++F AG+KP+D +I V SA
Sbjct: 507 LVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSA 566
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS G V EG HF M K +G++P M+HY +VD+LG +G +++AL+FI +MP + D
Sbjct: 567 CSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDAL 626
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAK 631
VW+ L+ C+ H N+++G+ A V QL+P N ++AGL L +
Sbjct: 627 VWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMR 686
Query: 632 EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
+K K + + V + +HE+RAGDTSHP+ ++IY + L ++K GY+P+T VLH
Sbjct: 687 DKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLH 746
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLS-SPARAPIRIMKNLRVCGDCHSALKIISKIVGRE 750
D+ E KE LL HSE++AV+ GL+S + A PIRI KNLRVC DCHSALK +SK GRE
Sbjct: 747 DMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGRE 806
Query: 751 LIIRDAKRFHHFKDGLCSCRDYW 773
+I+RD+ RFH KDG CSC +YW
Sbjct: 807 IILRDSNRFHRMKDGECSCGEYW 829
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 430 KAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITG 485
+A+ H+ R S L N +L +YS+C ++ A SVF M RDL SW M +
Sbjct: 67 RALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASC 126
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----------LG--------- 525
++NG +A+ +F + + GL P+ AC A LG
Sbjct: 127 LSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWG 186
Query: 526 -DVVEGMLHFESMSKDYGIVP-----------SMKHYVSIVDMLGSTGYLDEALEFIEKM 573
DV G + +K+ +V ++ + ++ +GY DEA+E M
Sbjct: 187 TDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDM 246
Query: 574 P---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+PD +++ C G+ LG + + +L
Sbjct: 247 LENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRL 284
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK-AVHEHVERL-LSP 442
L + G EA+ + G ++ + + T QAC ++ A AV V +L
Sbjct: 127 LSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWG 186
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
VS ++ M+++ + VF + ER + W +IT +A++G ++AV++F
Sbjct: 187 TDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDM 246
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG- 561
+ G +PD + SAC+ LG G S++ G+ +VDM +
Sbjct: 247 LENGFQPDQYTLSSMLSACTELGSFRLGQ-QLHSLALRLGLESDSCVSCGLVDMYAKSHN 305
Query: 562 --YLDEALEFIEKMPMEPDVDVWEKLMN 587
L A E +MP + +V W L++
Sbjct: 306 GQSLHNAREVFNRMP-KHNVMAWTALLS 332
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G EA+E+ + + D T S ++ AC + + + +H RL
Sbjct: 232 QSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSC 291
Query: 447 TYNGILKMYSEC---DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI-FSQF 502
G++ MY++ S+ +A VF+ M + ++ +W +++G+ + G ++ V I F +
Sbjct: 292 VSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKM 351
Query: 503 KQAGLKPDDQIFIGVFSACSALGD 526
G++P+ + + AC+ LGD
Sbjct: 352 LNEGIRPNHITYSSMLKACANLGD 375
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 220/341 (64%), Gaps = 14/341 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS N ++ MY++ ++ A F + ERD SW +MI A++G E+A+++F
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
GL+PD ++GVFSAC+ G V +G +F+ M I+P++ HY +VD+ G G L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA EFIEKMP+EPDV W L++ CR+H N++LG AE + L+P N + + L
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE--NSGAYSALAN 625
Query: 624 VNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ ++ E AK +++ KK + +EV+ KVH + D +HPE ++IY ++
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++K+ GY+P+T VLHD+++E KE+ L HSE+LA++ GL+S+P + +RIMKNLRV
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K ISK+VGRE+I+RD RFHHFKDG CSCRDYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ +AI V+G + K+ I T + ++ + + +E K VH + +L VS
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 449 NGILKMYSECDS-------------------------------MDDAFSVFSNMTERDLT 477
N +L MY++C MD A + F M ERD+
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFE 535
+W++MI+GF + G A+DIFS+ + + L PD V SAC+ L + G +H
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 536 SMSKDY---GIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
++ + GIV + +++ M G ++ A IE+
Sbjct: 305 IVTTGFDISGIVLN-----ALISMYSRCGGVETARRLIEQ 339
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 111/297 (37%), Gaps = 68/297 (22%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G A+++ +L +S D T + ++ AC + + L K +H H+
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 440 LSPLRVSTYNGILKMYSECD---------------------------------SMDDAFS 466
+ N ++ MYS C M+ A +
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV--------- 517
+F ++ +RD+ +W MI G+ ++G +A+++F G +P+ +
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 518 -------------------FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM-- 556
S +AL + + S S+ + ++ + VS M
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 557 -LGSTGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
L G+ +EALE E M ME PD + + + C G + G + ++++ +D
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 435 HVERLLS--PLRVS-TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
H +L PLR + ++N +L YS+ MD F + +RD SW TMI G+ G
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A+ + + G++P V ++ +A
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAA 158
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 247/431 (57%), Gaps = 19/431 (4%)
Query: 352 MASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
+A ++ + + D F+ +S + K + KEA+E+ + I D
Sbjct: 72 LAREIFDGTEDRDAFSWSS----------MISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC D AL VH VE L + ++ MY++C ++ A VF M
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ +W +MI G A +GLG +++ +FS+ G+KP+ F+GV AC+ +G V EG
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM++ +GI P+++HY +VD+LG +G+++EA + I M EPD +W L+ CR+
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H N+E+ + + LDP S + ++ + + + +++ ++
Sbjct: 302 HKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRS 361
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E K+HE+ +GD HP + +IY ++ + ++K+AGY P T VL DID++ KE +L
Sbjct: 362 SIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSL 421
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ LL++PAR+ IRI KNLR C DCHSA+K+IS + R+LI+RD RFHHF
Sbjct: 422 AEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHF 481
Query: 763 KDGLCSCRDYW 773
+G CSC+DYW
Sbjct: 482 SEGQCSCKDYW 492
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P+R + ++N ++ Y+ + A +F +RD SW +MI+ +AK+ ++A++++
Sbjct: 50 PMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWR 109
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ A + PD + V SACS LG + G + I +K +++DM
Sbjct: 110 EMHAASIIPDCITLVSVVSACSDLGALAVGA-EVHRFVESNRIELDLKLGTALIDMYAKC 168
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A ++MP E DV W ++
Sbjct: 169 GDIESAQRVFDRMP-EKDVQTWSSMI 193
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 239/397 (60%), Gaps = 9/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G +EA E L+++ + D+ T+ L+ ACG AL+ ++ + +
Sbjct: 441 VENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHI 500
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ M + S++ A +F NM +RD+ +W+ MI G++ +G +A+D+F + +
Sbjct: 501 PVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE 560
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+P+ F+GV SACS G V EG F + GIVP+M+ Y +VD+LG G LDE
Sbjct: 561 RFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDE 620
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKSKA 619
A I +MP++P+ +W L+ CR++GNL++ +R AE +P +L+ A
Sbjct: 621 AELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAA 680
Query: 620 GLVPVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ N +++ K E++ + + +EV K+H + D SHP+ +IYA + L
Sbjct: 681 AGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTA 740
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+K GYIP T+ VLH++ ++ KEEA+ HSE+LA+++G+LS P+ APIRI KNLRVCGDC
Sbjct: 741 IKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDC 800
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HSA K ISK+ GRE+I RDA RFHHFK+G+CSC DYW
Sbjct: 801 HSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 16/253 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + +++A + ++++ I D T+ ++ AC + L A+ +H V R
Sbjct: 335 MIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG 394
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C ++ DA VF M+ RD+ SW MI + +NG GE+A + F
Sbjct: 395 FGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFH 454
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K+ ++PD +I + +AC LG + GM ++ +++ D +V + ++++M
Sbjct: 455 LMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKAD--LVSHIPVGNALINMNVK 512
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSR--- 612
G ++ A E M ++ DV W ++ +HGN L+L DR + E+ P+
Sbjct: 513 HGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLK--ERFRPNSVTF 569
Query: 613 ---LNEKSKAGLV 622
L+ S+AG V
Sbjct: 570 VGVLSACSRAGFV 582
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 40/300 (13%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G K G ++A ++ ++++ + +F ++ C +AL KAVH
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+ +RV+T +++MY C S++ A VF M RD+ SW MI G+A+N EDA +
Sbjct: 294 LVDDVRVAT--ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGL 351
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSKDYGI-------------- 543
F+ ++ G++PD +I + +AC++ D+ + +H + + +G
Sbjct: 352 FATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAK 411
Query: 544 ------------VPSMKHYVSIVDMLGS---TGYLDEALEFIEKMP---MEPDVDVWEKL 585
S + VS M+G+ G +EA E M +EPDV + L
Sbjct: 412 CGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINL 471
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLE 645
+N C G L+LG EI Q + L G +N + E + +N+++
Sbjct: 472 LNACGHLGALDLG---MEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQ 528
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 8/208 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-- 439
+ G + G VKEA + + + + + TF ++ AC L+ K H V ++
Sbjct: 134 IAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF 193
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S R+ T ++ MY + SMD A VF + +RD+++++ MI G+AK+G GE A +F
Sbjct: 194 VSDFRIGT--ALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ +Q G KP+ F+ + CS + G +H + M+ G+V ++ +++ M
Sbjct: 252 YRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT--GLVDDVRVATALIRMYM 309
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A +KM + DV W ++
Sbjct: 310 GCGSIEGARRVFDKMKVR-DVVSWTVMI 336
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T+ +L Q C + K V +H+ + L + N ++K++S C +M +A
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F ++ + + +W+ +I G+A+ G ++A +F Q ++P F+ V ACS+ +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
G F + G V + ++V M G +D A
Sbjct: 179 KLGK-EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGA 216
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 242/404 (59%), Gaps = 15/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
+D ++G+ KE ++ L + I + TFS ++ AC + + E K VH ++ R+
Sbjct: 276 IDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGF 335
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P + + ++ MYS+C +M A VF + DL SW ++I G+A+NG ++A+ F
Sbjct: 336 DPFSFAA-SALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFE 394
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G +PD F+GV SAC+ G V +G+ +F S+ + YG+ + HY I+D+L +
Sbjct: 395 LLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARS 454
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G DEA I KM M+PD +W L+ CR+HGNL+L R AE + +++P N +
Sbjct: 455 GQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPE--NPATYVT 512
Query: 621 LVPVNA-----SELAKEKENK------KLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A SE+AK ++ K + + ++ VH + GD SHP++ +I
Sbjct: 513 LANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEF 572
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +MKE G++P+T FVLHD++ E KE+ L HSE+LAV+ G++S+P PI++ KN
Sbjct: 573 LGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKN 632
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR C DCH+A+K ISKI R++I+RD+ RFH F+DG CSCRDYW
Sbjct: 633 LRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 79/125 (63%), Gaps = 4/125 (3%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
E + L ++ ++KEA+++L ++K SV +S L+Q+C ++ L++ K VH+H++
Sbjct: 44 EAIHILCQQNRLKEALQILHQIDKPSASV----YSTLIQSCIKSRLLQQGKKVHQHIKLS 99
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N +L+MY++CDS+ D+ +F M ERDL SW+ +I+G+AK GL ++A +F
Sbjct: 100 GFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLF 159
Query: 500 SQFKQ 504
+ +
Sbjct: 160 DKMPE 164
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCIS-VDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + EA+E+ ++++ S + T S + A L K +H ++ R
Sbjct: 174 ISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTG 233
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ + MY +C S+++A +F M +RD+ +W MI + ++G ++ D+F+
Sbjct: 234 LDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFA 293
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
++G++P++ F GV +AC+ LG V G + G P ++V
Sbjct: 294 DLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYM------TRVGFDPFSFAASALVH 347
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G + A ++ P +PD+ W L+
Sbjct: 348 MYSKCGNMVSAERVFKETP-QPDLFSWTSLI 377
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 245/430 (56%), Gaps = 23/430 (5%)
Query: 365 DFAEASRSSQNNGTLEQLDGLVKEGKVK---------EAIEVLGLLEKQCISVDLPTFSQ 415
+ E S++ + +E D G +K EA+++ ++KQ + P+
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ C +L+ + VH H+ R V + ++ MY +C + A VF + +D
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ W+++I+G+A +GLGE+A+ IF + +G P+ I + +ACS G + EG+ FE
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
SM + + P+++HY VDMLG G +D+A+E IE M ++PD VW L+ C+ H L
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRL 516
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLASQNLL 644
+L + A+ + + +P N + L +NAS ++A ++N K + +
Sbjct: 517 DLAEVAAKKLFENEPD--NAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 645 EVRSKVHEY-RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
EV KVH + R G +HPE I ++ ++EAGY P+ VLHD+D+E K ++L
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSERLAV++GLL P PIR+MKNLRVCGDCH+A+K+ISK+ RE+I+RDA RFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 764 DGLCSCRDYW 773
+G CSCRDYW
Sbjct: 695 NGECSCRDYW 704
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S V ++NG++ Y + + +A +VF M ER++ SW M+ G+ + G+ +A +F
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + +F G+ +G + K Y ++P +K V+ +M+G
Sbjct: 134 WRMPERNEVSWTVMFGGLID---------DG--RIDKARKLYDMMP-VKDVVASTNMIGG 181
Query: 560 T---GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
G +DEA ++M E +V W ++ R + +++ + E++ +
Sbjct: 182 LCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 239/405 (59%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V+E + KE + + + + I + + AC A+E+ + + ++ER
Sbjct: 239 MINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKN 298
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MYS+C S++ A VF M E+++ +W MI G A NG G+DA+++FS
Sbjct: 299 VRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFS 358
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + G+KP++ FIG+ +ACS V EG F SM+ YG+ P+ H+ +VD+ G
Sbjct: 359 QMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRA 418
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD+A I+ MP +P+ +W L+N CR+HG+ ELG++ + + +LDP N +
Sbjct: 419 GMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDP---NHGGRYV 475
Query: 621 LVP------------VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L+ + +E++ K + +++ +HE+ AGD+SHP+ + IYA
Sbjct: 476 LLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYA 535
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ + ++K AGY P+T VL D+D+E KE AL HSE+LA++ GL+ + IRI K
Sbjct: 536 KLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITK 595
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHSA K+ISKI RE+I+RD RFHHF+DG CSC D+W
Sbjct: 596 NLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+ E + D+ TF L++AC + +L +A+H HV +L VS N +++MY+ C
Sbjct: 126 MTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCG 185
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-------------------- 499
++ A VF E D SW+ MI G+ K G+ + A +F
Sbjct: 186 LIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQ 245
Query: 500 -SQFKQA----------GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
S+FK+ ++P++ + + SAC+ LG + +G E + + +++
Sbjct: 246 ESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQW-IERYMERKNVRLTVR 304
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++DM G ++ ALE KM E +V W ++N
Sbjct: 305 LGTALIDMYSKCGSVERALEVFHKMK-EKNVLAWSAMIN 342
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 231/397 (58%), Gaps = 26/397 (6%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LG + S +P + ++ ACG+ AL + + H +V + + I+
Sbjct: 902 ETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIM 961
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C S+D A +F +DL W MI + +G G A+D+F Q +AG++P
Sbjct: 962 DMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHV 1021
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F V SACS G + EG ++F+ M++++ I + +Y +VD+LG G L EA++ IE
Sbjct: 1022 TFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN 1081
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------------SRLNEK 616
MP+EPD +W L+ CR+H NL+L ++ A+ + LDP SR NE
Sbjct: 1082 MPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEV 1141
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
K ++ + K+ +L+E ++VH++ GD SHP+ +K+YA + L A
Sbjct: 1142 EKV-------RKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAP 1194
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MK GY+P T FVLHDI++E KE AL HSERLA++ GL+++ +RI KNLR+CGDC
Sbjct: 1195 MKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDC 1254
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A+K+ISKIV R +++RD RFH F+DG+CSC DYW
Sbjct: 1255 HNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 14/323 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G +++ V + I D +++ A + ++A +H +V R S
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVR--S 437
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + G ++++YS+C S+ DA +F M RD+ W +MI + +G G +A++IF
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497
Query: 500 SQF-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
Q K + ++P++ F+ + SACS G V EG+ F+ M DY + P +H+ +VD+LG
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L +A++ I +MP+ VW L+ CR+H N+E+G+ A+ + LDPS
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617
Query: 619 AGLVPV------NASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ N +EL KE+ KK+ Q+++EVR VH + A D HP++ KIY L
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677
Query: 670 IRGLRAQMKEAGYIPETRFVLHD 692
+R L AQM + YIP+ F+LHD
Sbjct: 678 LRKLEAQMGKEVYIPDLDFLLHD 700
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +G+ ++E+ + ++ + D F +++C L+ K +H+H+
Sbjct: 789 MIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCG 848
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C ++ A VF M RDL SW +MI+G+A NG + + F
Sbjct: 849 CSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFD 908
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +G+ P+ + V AC LG + +G F S G + +I+DM
Sbjct: 909 LMRSSGVIPNRVSILSVLLACGNLGALRKGEW-FHSYVIQTGFEFDILVATAIMDMYSKC 967
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD A ++ + D+ W ++ +HG+ G + ++ +Q+ KAG
Sbjct: 968 GSLDLARCLFDETAGK-DLVCWSAMIASYGIHGH---GRKAIDLFDQM--------VKAG 1015
Query: 621 LVP 623
+ P
Sbjct: 1016 VRP 1018
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 392 KEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+EA+ + ++ C+ +D T ++ AC ++ VH V R + N
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L +Y++ A ++FS M E+D+ SW TMI +A N +A+++F + + +P+
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ AC+ ++ EG +H ++ K + + S+ +++DM DEA++
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS--TALIDMYMKCSCPDEAVDL 364
Query: 570 IEKMPMEPDVDVWEKLMN 587
+++P + DV W L++
Sbjct: 365 FQRLP-KKDVVSWVALLS 381
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 20/260 (7%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVER---LL 440
+E + +E + + L+ C + + P T ++AC + LE K +H ++ +
Sbjct: 79 REKQWEETLRLFHLM--ICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG 136
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S + V + ++++YS+C M +A VF D W +M+TG+ +N E+A+ +FS
Sbjct: 137 SDMFVGS--ALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFS 194
Query: 501 QFKQAGLKPDDQI-FIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDML 557
Q D + + V SAC+ L +V G +H + +++ G +P + S++++
Sbjct: 195 QMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVN---SLLNLY 251
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
TG A KMP E DV W ++ + N E + + ++ R S
Sbjct: 252 AKTGCEKIAANLFSKMP-EKDVISWSTMIAC---YANNEAANEALNLFHEMIEKRFEPNS 307
Query: 618 KAGLVPVNASELAKEKENKK 637
+ + A +++ E K
Sbjct: 308 VTVVSALQACAVSRNLEEGK 327
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
R+ T I MY + +D A VF ++ W+ MI GFA +G +++++S+
Sbjct: 753 RILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM 810
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ GLKPD F +C+ L D+ G + + + G + ++VDM G +
Sbjct: 811 EKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVC-CGCSNDLFVDAALVDMYAKCGDI 869
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
+ A +KM + D+ W +++
Sbjct: 870 EAARLVFDKMAVR-DLVSWTSMIS 892
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 237/403 (58%), Gaps = 11/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC--ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G EAIE+ ++E++ IS + T+ ++ AC A AL + +H + +
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 481
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L V + MY +C +DDA S+F + + W+T+I +G GE AV +F
Sbjct: 482 GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 541
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ G+KPD F+ + SACS G V EG FE M DYGI PS+KHY +VD+ G
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGR 601
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L+ AL FI+ MP++PD +W L++ CR+HGN++LG +E + +++P +
Sbjct: 602 AGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 661
Query: 620 GLVPVNASELAKEKENKKLAS---------QNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ +A + E + + S + +EV +KV + G+ +HP +++Y +
Sbjct: 662 SNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 721
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++K GY+P+ RFVL D++ + KE L++HSERLA++ L+++PA+ IRI KNL
Sbjct: 722 TALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNL 781
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCHS K ISKI RE+I+RD+ RFHHFK+G+CSC DYW
Sbjct: 782 RVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L ++ C++ L + + ++ G+ +A + L + + N ++ MY++
Sbjct: 341 LSRIQPDCLT--LISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIG--NAVVVMYAK 396
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG--LKPDDQIFI 515
+D A +VF+ + +D+ SW+T+I+G+A+NG +A+++++ ++ G + + ++
Sbjct: 397 LGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWV 456
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V ACS G + +GM + K+ G+ + S+ DM G G LD+AL ++P
Sbjct: 457 SVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR 515
Query: 576 EPDVDVWEKLMNLCRMHGNLE 596
V W L+ HG+ E
Sbjct: 516 VNSVP-WNTLIACHGFHGHGE 535
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G KEA+ L ++D T L+ AC +A +H + +
Sbjct: 222 MISGYCQSGNAKEALT----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L VS N ++ +Y+E S+ D VF M RDL SW+++I + N A+ +
Sbjct: 278 LESELFVS--NKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILL 335
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSI 553
F + + + ++PD I + S S LG++ V+G ++ K + + + ++
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGF----TLRKGW-FLEDITIGNAV 390
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V M G +D A +P DV W +++
Sbjct: 391 VVMYAKLGLVDSARAVFNWLP-NKDVISWNTIIS 423
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGL-LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G E I L + + D TF +++AC + + + +H +
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKF 179
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ +Y ++ +A +F M RD+ SW+ MI+G+ ++G ++A+ +
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL- 238
Query: 500 SQFKQAGLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
GL+ D + + + SAC+ GD G + S S +G+ + ++D+
Sbjct: 239 ----SDGLRAMDSVTVVSLLSACTEAGDFNRG-VTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L + + ++M + D+ W ++
Sbjct: 294 EFGSLKDCQKVFDRMYVR-DLISWNSII 320
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L+ AK +H + + V ++ +Y ++ A F ++ RD+ +W+ MI+G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 486 FAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
+ + G + + FS F +GL+PD + F V AC +V +G ++ +G +
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR---NVTDGN-KIHCLALKFGFM 182
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ S++ + G + A ++MP D+ W +++
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMIS 224
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 240/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G EA+ + + + + D T L+ AC + AL + VH ++ ++
Sbjct: 209 INGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGL 268
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L +YS+C + DA VF M ER + SW ++I G A NGLG +A+ +F +
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGE 328
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GLKP + F+GV ACS G + EG +F M ++YGI+P ++H+ +VD+L G
Sbjct: 329 LERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAG 388
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+ +A ++I MP+ P+ +W L+ C +HG+LELG+ +++L+ S
Sbjct: 389 KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSN 448
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L + L N ++ K KK +L+E++++V+E+ GD SHP++++ YA++
Sbjct: 449 LYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAK 508
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K GY+P T VL DI++E KE AL H+E++A++ L+++P PIRIMKNLRV
Sbjct: 509 ITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRV 568
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K+ISK+ RE+I+RD RFHHFKDG CSC+DYW
Sbjct: 569 CADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDA 464
I D TF L +A + + +H V R LR N ++ MYS + A
Sbjct: 132 ILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRF-VQNSLVHMYSVFGFAESA 190
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ VF M+ RD +W+++I GFA NG+ +A+ ++ + G++PD + + SAC L
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G + G M K G+V + +++D+ G +A + ++M E V W
Sbjct: 251 GALALGERVHMYMVK-VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTS 308
Query: 585 LM 586
L+
Sbjct: 309 LI 310
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 46/239 (19%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMY 455
L + ++CIS L+Q CG +++ + K +H R P + +N I +
Sbjct: 30 LSFILRKCIS--------LVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALV 79
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIF 514
S M A +F+ + ++ +W+TMI GFA++ AV++FSQ A + PD F
Sbjct: 80 SLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTF 139
Query: 515 IGVFSACSALGDVVEG---------------------MLHFESM----SKDYGIVPSMKH 549
+F A + L DV G ++H S+ Y + M +
Sbjct: 140 PFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSY 199
Query: 550 -----YVSIVDMLGSTGYLDEALEFIEKM---PMEPDVDVWEKLMNLCRMHGNLELGDR 600
+ S+++ G +EAL +M +EPD L++ C G L LG+R
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 229/374 (61%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ +L K +H + VS N ++ MY++ S+ A F +
Sbjct: 415 TLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLI 474
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
ERD SW +MI A++G E+A+++F GL+PD ++GVFSAC+ G V +G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F+ M I+P++ HY +VD+ G G L EA EFIEKMP+EPDV W L++ CR
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLA 639
++ N++LG AE + L+P N + + L + ++ E AK +++ KK
Sbjct: 595 VYKNIDLGKVAAERLLLLEPE--NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +EV+ KVH + D HP+ ++IY ++ + ++K+ GY+P+T VLHD+++E KE
Sbjct: 653 GFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
+ L HSE+LA++ GL+S+P + +RIMKNLRVC DCH+A+K ISK+VGRE+I+RD RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG CSCRDYW
Sbjct: 773 HHFKDGFCSCRDYW 786
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ +AI ++G + ++ I T + ++ + + LE K VH + +L VS
Sbjct: 125 GQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVS 184
Query: 449 NGILKMYSECDS-------------------------------MDDAFSVFSNMTERDLT 477
N +L MY++C MD A + F M ERD+
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFE 535
+W++MI+G+ + G A+D+FS+ + + L PD V SAC+ L + G +H
Sbjct: 245 TWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSH 304
Query: 536 SMSKDY---GIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
++ + GIV + +++ M G ++ A IE+
Sbjct: 305 IVTTGFDISGIVLN-----ALISMYSRCGGVETARRLIEQ 339
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 90/230 (39%), Gaps = 34/230 (14%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+L +S D T + ++ AC + + L + +H H+ + N ++ MYS C
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 460 ---------------------------------SMDDAFSVFSNMTERDLTSWDTMITGF 486
M++A ++F ++ +RD+ +W MI G+
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS 546
++GL +A+++F +P+ + S S+L + G S K G + S
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKS-GEIYS 447
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ +++ M G + A + + E D W ++ HG+ E
Sbjct: 448 VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 442 PLRVS-TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
PLR + ++N +L Y++ MD + F + +RD SW TMI G+ G A+ I
Sbjct: 76 PLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMG 135
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++P V ++ +A +E S G+ ++ S+++M
Sbjct: 136 EMMREGIEPSQFTLTNVLASVAA-TRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
G A ++M ++ D+ W ++ L G ++L
Sbjct: 195 GDPMMAKVVFDRMVVK-DISSWNAMIALHMQVGQMDLA 231
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 240/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G EA+ + + + + D T L+ AC + AL + VH ++ ++
Sbjct: 209 INGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGL 268
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L +YS+C + DA VF M ER + SW ++I G A NGLG +A+ +F +
Sbjct: 269 VQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGE 328
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GLKP + F+GV ACS G + EG +F M ++YGI+P ++H+ +VD+L G
Sbjct: 329 LERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAG 388
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+ +A ++I MP+ P+ +W L+ C +HG+LELG+ +++L+ S
Sbjct: 389 KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSN 448
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L + L N ++ K KK +L+E++++V+E+ GD SHP++++ YA++
Sbjct: 449 LYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAK 508
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K GY+P T VL DI++E KE AL H+E++A++ L+++P PIRIMKNLRV
Sbjct: 509 ITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRV 568
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K+ISK+ RE+I+RD RFHHFKDG CSC+DYW
Sbjct: 569 CADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 4/182 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDA 464
I D TF L +A + + +H V R LR N ++ MYS S+ A
Sbjct: 132 ILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRF-VQNSLVHMYSVLGSLXSA 190
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ VF M+ RD +W+++I GFA NG+ +A+ ++ + G++PD + + SAC L
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G + G M K G+V + +++D+ G +A + ++M E V W
Sbjct: 251 GALALGERVHMYMVK-VGLVQNQHASNALLDLYSKCGNFRDAQKVFDEME-ERSVVSWTS 308
Query: 585 LM 586
L+
Sbjct: 309 LI 310
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 46/239 (19%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMY 455
L + ++CIS L+Q CG +++ + K +H R P + +N I +
Sbjct: 30 LSFILRKCIS--------LVQLCGSSQS--KLKQIHAFSIRHGVPPQNPDFNKHLIFALV 79
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIF 514
S M A +F+ + ++ +W+TMI GFA++ AV++FSQ A + PD F
Sbjct: 80 SLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTF 139
Query: 515 IGVFSACSALGDVVEG---------------------MLHFE----SMSKDYGIVPSMKH 549
+F A + L DV G ++H S+ Y + M +
Sbjct: 140 PFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSY 199
Query: 550 -----YVSIVDMLGSTGYLDEALEFIEKM---PMEPDVDVWEKLMNLCRMHGNLELGDR 600
+ S+++ G +EAL +M +EPD L++ C G L LG+R
Sbjct: 200 RDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 221/374 (59%), Gaps = 14/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ AC L+ K +H R L VS N I+ +Y+ S+ A VF +
Sbjct: 616 TLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQI 675
Query: 472 TERDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R T +W +MI A++GLGE AV +F + + G+KPD ++GV SAC+ G V +G
Sbjct: 676 CWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKG 735
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++E M ++GIVP M HY +VD+ G L EA EFI++MP+ PD VW L+ CR
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACR 795
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLA 639
+ N +L + A + +DP N + + L V ++ +L K+K KK
Sbjct: 796 VRKNADLAELAAGKLLSIDPH--NSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKET 853
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ VR KVH + A D HP+ D IY + ++K+AG++P+ VLHD+D E KE
Sbjct: 854 GFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKE 913
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA++ GL+S+P + +RIMKNLRVC DCH+A+K ISK V RE+I+RDA RF
Sbjct: 914 ELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRF 973
Query: 760 HHFKDGLCSCRDYW 773
HHF+DG CSC+DYW
Sbjct: 974 HHFRDGYCSCKDYW 987
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
CGDA E A+AV E ++ VS++N ++ +Y+ M+ A S+F NM ER + SW
Sbjct: 395 CGDA---ETARAVFERMQ----VRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSW 447
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACSAL 524
+T+I G+ +NGL A+ FS+ A ++PD V SAC+ L
Sbjct: 448 NTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANL 493
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+N +L +Y++ + DA VF+ M +RD SW MI G ++G DAV F G
Sbjct: 283 TWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEG 342
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
P V S+C+A+ G G+ + S++ M G G + A
Sbjct: 343 FAPSQFTLTNVLSSCAAMEACGVGR-KVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETA 401
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
E+M + V W +++L G +EL
Sbjct: 402 RAVFERMQVR-SVSSWNVMVSLYTHQGRMELA 432
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 410 LPTFSQLMQAC----GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+P SQ+M A + ++E A+ + + + +++ L V ++ +L+ Y + A
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMD--QAVVADLNVISFTALLEGYVKLGDTKQAR 568
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M RD+ +W MI G+ +NG ++A+++F G +P+ V SAC++L
Sbjct: 569 EIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLA 628
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G +H +++ S+ + +I+ + +G + A +++ + W
Sbjct: 629 YLDYGKQIHCKAIRSLQEQSVSVSN--AIITVYARSGSVPLARRVFDQICWRKETITWTS 686
Query: 585 LMNLCRMHGNLELGDRCAEIVEQL 608
++ HG LG++ + E++
Sbjct: 687 MIVAMAQHG---LGEQAVVLFEEM 707
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 246/399 (61%), Gaps = 10/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G VKEA+ + +++ Q I +D T ++ A D +AK +H R
Sbjct: 421 GYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDN 480
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V ++ MY++C ++ A +F M ER + +W+ MI G+ +G+G++ +D+F++ +
Sbjct: 481 NVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQ 540
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ +KP+D F+ V SACS G V EG+L F+SM +DY + P+M HY ++VD+LG G L
Sbjct: 541 KGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQL 600
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNEKS 617
D+A FI++MP++P + V ++ C++H N+ELG++ A+ + +LDP L
Sbjct: 601 DDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIY 660
Query: 618 KAGLVPVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ + +++ E+K L + +E+R+++H + +G T+HPE+ KIYA + L
Sbjct: 661 ASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLG 720
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++K AGY+P+ + HD++++ K++ L +HSERLA++ GLL++ + I KNLRVCG
Sbjct: 721 DEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCG 779
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH K IS + GRE+I+RD +RFHHFK+G CSC DYW
Sbjct: 780 DCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 21/222 (9%)
Query: 381 QLDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLM---QACGDAKALEEAKAVHEHV 436
+DG + G+ +EA L +L++ ++PT +M AC + LE VH+ +
Sbjct: 318 MIDGCAQNGESEEAFATFLKMLDEG----EVPTRVTMMGVLLACANLGDLERGWFVHKLL 373
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
++L VS N ++ MYS+C +D A S+F+N+ + ++T W+ MI G+A+NG ++A+
Sbjct: 374 DKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVT-WNAMILGYAQNGCVKEAL 432
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYV 551
++F + G+K D +GV +A + + G+ M + + ++
Sbjct: 433 NLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTAL---- 488
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
VDM G + A + + M E V W +++ HG
Sbjct: 489 --VDMYAKCGAIKTARKLFDMMQ-ERHVITWNAMIDGYGTHG 527
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G K A++++ +++ D T ++ A D KAL +++H + R
Sbjct: 220 GYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFES 279
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+ N +L MY +C S A VF M + + SW+TMI G A+NG E+A F +
Sbjct: 280 LVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKML 339
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG 530
G P +GV AC+ LGD+ G
Sbjct: 340 DEGEVPTRVTMMGVLLACANLGDLERG 366
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT--FSQLMQACGDAKALEEAKAVHEHVER 438
L G K + +A+ L C V L ++ L+Q CG+ L++ + +H +
Sbjct: 116 MLKGYAKNSSLGDALCFF--LRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIIT 173
Query: 439 --LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
S L V T ++ +Y++C +D+A+ +F M +DL SW T++ G+A+NG + A+
Sbjct: 174 NGFESNLFVMT--AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRAL 231
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACS 522
+ Q ++AG KPD + + A +
Sbjct: 232 QLVLQMQEAGQKPDSVTLVSILPAVA 257
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 241/399 (60%), Gaps = 21/399 (5%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL----RVST 447
+EA+ + ++ ++ ++ + TF ++ AC AL+ K VH ++++ L VS
Sbjct: 342 EEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSL 401
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ I+ MY++C ++ A VF +M R L SW+ MI+G A NG E A+ +F + G
Sbjct: 402 WTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGF 461
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+PDD F+GV SAC+ G V G +F SM+KDYGI P ++HY ++D+L +G DEA
Sbjct: 462 QPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAK 521
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA- 626
+ M MEPD +W L+N CR+HG +E G+ AE + +L+P E S A ++ N
Sbjct: 522 VLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEP----ENSGAYVLLSNIY 577
Query: 627 ------SELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
++AK +K KK+ +E+ VHE+ GD HP+++ I+ ++ +
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++E G++P+T VL+D+D+E KE AL HSE+LA++ GL+S+ + IRI+KNLRVC
Sbjct: 638 RLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCR 697
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CHSA K+ISKI RE+I RD RFHHFKDG CSC D W
Sbjct: 698 NCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +EA+ +++ +S + T ++ ACG ++LE K + V
Sbjct: 230 MIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRG 289
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MYS+C + A +F M ++D+ W+TMI G+ L E+A+ +F
Sbjct: 290 FGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFE 349
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGML---HFESMSKDYGIVPSMKHYVSIVDML 557
+ + P+D F+ V AC++LG + G + + K G V ++ + SI+ M
Sbjct: 350 VMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMY 409
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G ++ A + M + W +++ M+G+ E
Sbjct: 410 AKCGCVEVAEQVFRSMGSR-SLASWNAMISGLAMNGHAE 447
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM---------- 461
TF L ++C +KA EAK +H H +L L + ++ MYS+ +
Sbjct: 129 TFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKS 188
Query: 462 ---------------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
DDA +F + +D+ SW+ MI G+ ++G E+A+ F+
Sbjct: 189 TLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFT 248
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++A + P+ + V SAC L + G S +D G +++ ++VDM
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELGKW-IGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + A + + M + DV +W ++
Sbjct: 308 GEIGTARKLFDGME-DKDVILWNTMI 332
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 233/371 (62%), Gaps = 10/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+++ L AC LE+ K VH ++ + L N +L MY++ S+ DA +F +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW++++T +A++G G++AV F + ++ G++P++ F+ V +ACS G + EG
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++E M KD GIVP HYV++VD+LG G L+ AL FIE+MP+EP +W+ L+N CRM
Sbjct: 384 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKEN--KKLASQN 642
H N ELG AE V +LDP N + G A K KE+ KK + +
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ + +H + A D HP+ ++I + A++KE GY+P+T V+ +DQ+ +E L
Sbjct: 503 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 562
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE++A++ LL++P + I I KN+RVCGDCH+A+K+ SK+VGRE+I+RD RFHHF
Sbjct: 563 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHF 622
Query: 763 KDGLCSCRDYW 773
KDG CSC+DYW
Sbjct: 623 KDGNCSCKDYW 633
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
LE I D ++ L++ C K L + + VH H+ + + + N +L MY++C S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+++A VF M +RD +W T+I+G++++ DA+ F+Q + G P++ V A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 521 CSA 523
+A
Sbjct: 171 AAA 173
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + +L +Y+ MDDA VF + R+ SW+ +I G A+ E A+++F +
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G +P + +F ACS+ G + +G +H + +V + +++DM +G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSI 313
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A + +++ + DV W L+ HG
Sbjct: 314 HDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 246/403 (61%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + K +AIE+ ++ + ++ + T ++ AC AL+ K +H + R
Sbjct: 230 MISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN 289
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + N + MY++C + +A VF M ERD+ SW +I G A G +A + F
Sbjct: 290 KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFF 349
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++ + GL+P+D F+G+ +AC+ G V +G+ +F+ M + YGI P ++HY +VD+L
Sbjct: 350 AEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSR 409
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------- 612
G LD+A I MPM+P+V VW L+ CR++ + E G+R + +LD +
Sbjct: 410 AGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYL 469
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQ--NLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + G + AS + ++NK + + + +E+ + V+E+ GD+SHP++ +IY++I
Sbjct: 470 ANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMI 529
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
R L+ +MK AGY P+T V+H+ID+E KE+AL HSE+LA++ GL+++ IRI+KNL
Sbjct: 530 RELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNL 589
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+KIISKIV RE+++RD RFHHFKDG CSC DYW
Sbjct: 590 RVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK- 503
V ++N ++ Y +D A VF M E++L SW TMI+G+A+N DA+++F Q +
Sbjct: 193 VVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQH 252
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ GL P+D + V SAC+ LG + G + ++ I + ++ DM G +
Sbjct: 253 EGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN-KIEVGLFLGNALADMYAKCGCV 311
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL-ELGDRCAEIVEQ-LDPSRLNEKSKAGL 621
EA +M E DV W ++ M+G E + AE++E L+P N+ S GL
Sbjct: 312 LEAKGVFHEMH-ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP---NDISFMGL 367
Query: 622 V 622
+
Sbjct: 368 L 368
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 238/405 (58%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ + A+ V + + D T + L +A ALE+ + +H + +L
Sbjct: 597 ISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 656
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ MY++C S+DDA+ +F + ++T+W+ M+ G A++G G++A+ +F Q
Sbjct: 657 TSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQ 716
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KPD FIGV SACS G V E + SM +DYGI P ++HY + D LG G
Sbjct: 717 MESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAG 776
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+ EA I+ M ME ++ L+ CR+ G+ E G R A + +L+P S A +
Sbjct: 777 LVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL----DSSAYV 832
Query: 622 VPVNASELAKEKENKKLASQNL-------------LEVRSKVHEYRAGDTSHPETDKIYA 668
+ N A + + KLA + +EV++K+H + D S+P+T+ IY
Sbjct: 833 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYK 892
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ + +K+ GY+PET F L D+++E KE AL HSE+LAV+ GLLS+P PIR++K
Sbjct: 893 KVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIK 952
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A+K ISK+ RE+++RDA RFH FKDG+CSC DYW
Sbjct: 953 NLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+ +E+ L+ KQ D T + +++ CG A+ + K VH + + L + +GIL
Sbjct: 507 KTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 566
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C M A F ++ D +W T+I+G +NG E A+ +FSQ + G+ PD+
Sbjct: 567 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEF 626
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ A S L + +G +H ++ + P + S+VDM G +D+A +
Sbjct: 627 TIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFK 684
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
++ M ++ W ++ HG
Sbjct: 685 RIEMM-NITAWNAMLVGLAQHG 705
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%)
Query: 368 EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE 427
+AS S+ + L G + G+ ++ + + + D TF ++ +L
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA 339
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
+ VH +L L ++ N ++ MY + + A +VF+NM+ERDL SW+++I G A
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIA 399
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
++ L +AV +F Q + GLKPD V A S+L
Sbjct: 400 QSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSL 436
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+ T ++ C A+ L A+ E+ ER L N ++ MYS+C S+ A VF
Sbjct: 57 ISTSDLMLGKCTHARIL----ALEENPERFL-------VNNLISMYSKCGSLTYARRVFD 105
Query: 470 NMTERDLTSWDTMITGFAKN--GLGEDAVDIFSQFK 503
M ERDL SW++++ +A++ G+ E+ + F F+
Sbjct: 106 KMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFR 141
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
VKEA + +L + + T S +++ C + + +++ H + ++
Sbjct: 133 VKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGA 192
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +Y + + + +F M RD+ W+ M+ + + G E+A+D+ S F +GL P+
Sbjct: 193 LVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPN 252
Query: 511 D 511
+
Sbjct: 253 E 253
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
S L A + L +K +H H + + ++ YS M +A +F
Sbjct: 428 SVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NN 486
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-ML 532
DL +W+ M++G+ ++ G +++F+ + G + DD V C L + +G +
Sbjct: 487 FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546
Query: 533 HFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
H ++ Y + +VS I+DM G + A + +P+ DV W L++ C
Sbjct: 547 HAYAIKSGY----DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTLISGCI 601
Query: 591 MHGNLE 596
+G E
Sbjct: 602 ENGEEE 607
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 251/428 (58%), Gaps = 13/428 (3%)
Query: 358 NNCKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
+ CK D A+ ++ +N + + G + G V EA+ ++ + I D T
Sbjct: 278 SKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMV 337
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
++ A + +AK +H V R V ++ MY++C ++ A +F M R
Sbjct: 338 SVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR 397
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
+ +W+ MI G+ +GLG+ +V++F + K+ +KP+D F+ SACS G V EG+ F
Sbjct: 398 HVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFF 457
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
ESM KDYGI P+M HY ++VD+LG G L++A +FI+KMP++P + V+ ++ C++H N
Sbjct: 458 ESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKN 517
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ---------NLLE 645
++LG++ A + +L+P + AS K + + + + +L+E
Sbjct: 518 VDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVE 577
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
+ ++VH + +G TSHP++ KIY+ + L +++ AGY+P+T + HD++ + K + L H
Sbjct: 578 IGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTH 636
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE+LA++ GLL++ PI I KNLRVCGDCH+A K IS + GRE+I+RD RFH FKDG
Sbjct: 637 SEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDG 696
Query: 766 LCSCRDYW 773
+CSC DYW
Sbjct: 697 VCSCGDYW 704
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ G + A+ + + + + T + AC D LE K VH+ V++L
Sbjct: 203 MIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK 262
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS N ++ MYS+C +D A +F N+ + L SW+ MI G+A+NG +A++ F
Sbjct: 263 LDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFC 322
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + +KPD + V A + L + G++ + K+ ++ ++ VD
Sbjct: 323 EMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTAL------VD 376
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
M G + A + + M V W +++ HG LG E+ +++ +
Sbjct: 377 MYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTHG---LGKTSVELFKEMKKGTIKP 432
Query: 616 KSKAGLVPVNA 626
L ++A
Sbjct: 433 NDITFLCALSA 443
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 42/305 (13%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K + A+ ++ + + F+ L++ CGD L+ K +H V
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ G++ MY++C ++DA+++F M ERDL W+TMI+G+A+NG + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLH---FESM--------------- 537
+ + G +PD + + A + +G V G + FES+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 538 --SKDYGIVPSMKH-----YVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEKLMN 587
S I M H + S++D +G + A+ +KM ++P ++
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 588 LCRMHGNLELGDRCAEIVEQL----DPSRLNEK----SKAGLVPVNASELAKEKENKKLA 639
C G+LE G ++V+QL D S +N SK V + A+++ K NK L
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDI-AADIFKNLRNKTLV 299
Query: 640 SQNLL 644
S N +
Sbjct: 300 SWNAM 304
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 227/376 (60%), Gaps = 19/376 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++ C + AL+ K VH+ + + ++ +L MY +C ++DA+ +F M
Sbjct: 229 SLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVM 288
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ +W+ MI+G+A++G GE A+ +F + + G+KPD F+ V SAC+ G V G+
Sbjct: 289 PQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGI 348
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM +DYG+ HY +VD+LG G L EA++ I+KMP +P ++ L+ CR+
Sbjct: 349 EYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRI 408
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE------------KENK--K 637
H NLEL + A+ + LDP +S AG V + A K+NK K
Sbjct: 409 HKNLELAEFAAKNLLNLDP-----ESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIK 463
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ +EV+S VHE+R+GD HPE I+ + L +M+ AGY+P+ + LHD+ +E
Sbjct: 464 TPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQ 523
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K++ LL HSE+LA+++GL+ P PIR+ KNLRVCGDCHSA K IS I GR +I+RD
Sbjct: 524 KKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTT 583
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHF+ G CSC DYW
Sbjct: 584 RFHHFRQGECSCGDYW 599
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
+ K + +R+ P + +YN +L Y ++ A F M +D SW+TMI+GF+
Sbjct: 52 KIKVARQLFDRIPEP-DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFS 110
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS----ALGDVVEGMLHFESMSKDYGI 543
+NG+ + A ++F + + V ++ S G V G L +
Sbjct: 111 QNGMMDQARELF-------------LVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAP 157
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL----MNLCRMHGNLELGD 599
V S+ + +++ G ++ A ++ E+MPM+ ++ W + + C+ L+L
Sbjct: 158 VRSVVAWTAMITGFMKFGKIELAEKYFEEMPMK-NLVTWNAMIAGYIENCQAENGLKLFK 216
Query: 600 RCAEIVEQLDPSRLN 614
R E + +PS L+
Sbjct: 217 RMVESGFRPNPSSLS 231
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDAVDIFSQFK 503
V + N ++ + ++ A VF +MT + +W++M+ G++ + G + A +F +
Sbjct: 5 VISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI- 63
Query: 504 QAGLKPDDQIF-IGVFSACSAL-GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
P+ IF + AC DV L F+ M V + +++ G
Sbjct: 64 -----PEPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFSQNG 113
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA-- 619
+D+A E MP+ V W +++ G+L+L + E+ P R A
Sbjct: 114 MMDQARELFLVMPVRNSVS-WNAMISGYVESGDLDLAKQLFEVA----PVRSVVAWTAMI 168
Query: 620 -GLVPVNASELAKEKENKKLASQNLLEVRSKVHEY 653
G + ELA EK +++ +NL+ + + Y
Sbjct: 169 TGFMKFGKIELA-EKYFEEMPMKNLVTWNAMIAGY 202
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 234/404 (57%), Gaps = 15/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ E+I + + ++ + TF+ ++ AC +L++ ++VH ++ R
Sbjct: 288 IAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV 347
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V Y + MY++C + A+ VF + E+++ SW TMI GF +GL +A+++F +
Sbjct: 348 ELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYE 407
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ P+ F+ V SACS G + EG HF+SMS+DYGI P +HY +VD+LG G
Sbjct: 408 MRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAG 467
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+DEAL FI MP EP W L+ CR+H EL + E+ ++L P ++ +
Sbjct: 468 KIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAE---EVAKKLLPLESDQSGVYVM 524
Query: 622 VP-----VNASELAK-------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ V E+ K EK K+ +E+ K++ + + D + +I +L
Sbjct: 525 LSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESL 584
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
L+ +M+E GY+P+ RFVLHD+D E K+E L HSE+LA+ GLL+S PIRI KN
Sbjct: 585 WNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKN 644
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+RVCGDCH+A K IS I R++I+RD KRFHH +DG+CSC DYW
Sbjct: 645 MRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 9/211 (4%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGIL 452
E+ + + +D L+QACG+ A +E K H +++ ++
Sbjct: 198 VFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLV 257
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C +D A +F ++ RD+ W +I GFA+NG +++ +F Q + P+
Sbjct: 258 DMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSV 317
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F + ACS+LG + +G M ++ G+ +K+Y S +DM G + A +
Sbjct: 318 TFASIVLACSSLGSLKQGRSVHGYMIRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQ 376
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
+P E +V W ++N MHG CAE
Sbjct: 377 IP-EKNVFSWSTMINGFGMHG------LCAE 400
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 33/256 (12%)
Query: 343 YSGNIQNGMM--ASQVLNNCKHED------DFAEASRSSQNNGTLEQLDGLVKEGKVKEA 394
+ IQ G + AS+ N+ E+ A S++ L+ ++KEGK+ ++
Sbjct: 54 FGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDS 113
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
++ F+ ++AC + AK H +L ++ +
Sbjct: 114 FNLV--------------FA--VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNV 157
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y+E S+++A VF + ++ W MI G ++FS+ +++G + D +
Sbjct: 158 YTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVV 217
Query: 515 IGVFSACSALGDVVEG----MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
G+ AC G+V G H + K++ I + S+VDM G+LD AL+
Sbjct: 218 EGLIQAC---GNVYAGKEGKTFHGLCIKKNF-IDSNFFLQTSLVDMYMKCGFLDFALKLF 273
Query: 571 EKMPMEPDVDVWEKLM 586
E++ DV VW ++
Sbjct: 274 EEISYR-DVVVWSAII 288
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I Y + S+ A F+++T +L SW+T++ +KN D + +F + + G D
Sbjct: 53 IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 112
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ AC L + +G F S++ + +++++ G L+EA +
Sbjct: 113 SFNLVFAVKACFGL-SLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVF 171
Query: 571 EKMPMEPDVDVWEKL----MNLCRMHGNLELGDRCAEIVEQLDP 610
E++P++ V +W + +N G EL R +LDP
Sbjct: 172 EEVPLKNSV-IWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDP 214
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 269/465 (57%), Gaps = 29/465 (6%)
Query: 325 DQSRRQYQQNPNEGQYQSY----SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGT 378
+ +R ++ P+ ++ SG + GM+ A + + K D+ + ++
Sbjct: 221 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA-------- 272
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+DG ++EG EA+E+ ++K+ I ++ AC + AL++ + +H + +R
Sbjct: 273 --MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKR 330
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L ++ MY++C +D A+ VF M+ ++++SW+ MI G A +G EDA+D+
Sbjct: 331 NSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDL 390
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+ + P++ F+GV +AC+ G V +G+ F SM K+YG+ P ++HY IVD+LG
Sbjct: 391 FSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 447
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G L EA + + +P EP VW L+ CR HGN+ELG+R +I+ +L+P
Sbjct: 448 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 507
Query: 614 --NEKSKAGLVPV--NASELAKEKENKKLASQNLLEV-RSKVHEYRAGDTSHPETDKIYA 668
N +KAG +L KE+ K +++++ R +VH++ GD SHP+ IY
Sbjct: 508 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 567
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ ++ +++ GY P+ VL DID+E KE A+ HSE+LA+ GL+++ IRI+K
Sbjct: 568 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 627
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHSA K+IS++ RE+I+RD R+HHF++G CSC+D+W
Sbjct: 628 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
E +A E E + +ST+N ++ +S C ++ A F M ERD SW MI G+
Sbjct: 219 EVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYI 278
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
+ G +A++IF Q ++ ++P + V SAC+ LG + +G + +K I
Sbjct: 279 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRW-IHTYAKRNSIQLDG 337
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
S+VDM G +D A E EKM +V W ++ MHG E
Sbjct: 338 VLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAE 385
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S + + VF + + ++ W+ MI +N A+ ++ + A +P+ + V
Sbjct: 86 SFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLK 145
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ACS G V EG+ + K +G+ S + M S G L EA ++ E D
Sbjct: 146 ACSDAGVVAEGVQVHAHLVK-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA 204
Query: 580 DVWEKLMN 587
W +++
Sbjct: 205 VCWNAMID 212
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 239/409 (58%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVER 438
L G + G +EA+ V +++ I D T ++ +C + +LEE H V
Sbjct: 342 MLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSG 401
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S + VS N ++ +Y +C S++D+ +F M+ RD SW +++G+A+ G + +D+
Sbjct: 402 LISFITVS--NALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDL 459
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + GLKPD FI V SACS G V G +FESM KD+GI+P HY ++D+ G
Sbjct: 460 FERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFG 519
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L+EA FI KMP PD W L++ CR++GN E+G AE + +LDP ++
Sbjct: 520 RAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDP-----QNP 574
Query: 619 AGLVPVNASELAK--------------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
AG + +++ AK EK +K + ++ +SKV+ + A D S P +D
Sbjct: 575 AGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSD 634
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IYA + L +M E GY+P+ VLHD++ K + L HSE+LA++ GLL P PI
Sbjct: 635 QIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPI 694
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++KNLRVCGDCH+A K ISKI RE+++RDA RFH FKDG CSC D+W
Sbjct: 695 RVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 132/252 (52%), Gaps = 14/252 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL++ G EA+++ + ++ +++D TF ++ ACG +AL+E K +H + R
Sbjct: 241 MITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MY +C S+ A +VF M +++ SW M+ G+ +NG E+AV +F
Sbjct: 301 YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFC 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G++PDD V S+C+ L + EG F + G++ + +++ + G
Sbjct: 361 DMQRNGIEPDDFTLGSVISSCANLASLEEGA-QFHCQALVSGLISFITVSNALITLYGKC 419
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN----LCRMHGNLELGDRCAEIVEQLDP------ 610
G ++++ + ++M +V W L++ + + ++L +R +V+ L P
Sbjct: 420 GSIEDSNQLFDEMSFRDEVS-WTALVSGYAQFGKANETIDLFER--MLVQGLKPDAVTFI 476
Query: 611 SRLNEKSKAGLV 622
+ L+ S+AGLV
Sbjct: 477 AVLSACSRAGLV 488
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ + D+ +F M ERD SW TMITG +NGL +A+D+F +Q
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ D F V +AC L + EG
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEG 289
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+ C + + +AK +H + + L+ YN ++ YS+ ++ A VF M + +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP--DDQIFIGVFSACSALGDVVEGMLHFE 535
SW+TM++ ++K+G +IFS + P D + + S G VVE + +
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFS------IMPNRDGVSWNSLISGYVCYGSVVEAVKTYN 126
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
SM KD + + + +++ ++ S G +D
Sbjct: 127 SMMKDGVLNLNRITFSTMLLLVSSQGCVD 155
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 256/435 (58%), Gaps = 27/435 (6%)
Query: 352 MASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
MA ++ + + D F+ +S + K KEA+E+ + ++ D
Sbjct: 165 MAREIFDGTRDRDAFSWSS----------MISAYAKGRCSKEALELWREMRVAGVAPDCI 214
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVE--RLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+ ++ AC AL VH VE R+ +++ T ++ MY++C ++++ VF
Sbjct: 215 SMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGT--ALVDMYAKCGDIENSLKVFH 272
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +D+ +W +MI G A +GLG DA+ +FS+ GL+P++ FIGV AC+ +G V +
Sbjct: 273 AMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVND 332
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G +F SMS +G+VP M+HY +VD+LG G+++EA+E I M +PD +W L+ C
Sbjct: 333 GKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGAC 392
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA--------SELAK--EKEN-KKL 638
R+H N+E+ + ++ LDP L + L + A +E+ K +EN +++
Sbjct: 393 RIHKNVEIAEEAMAKLKVLDP--LADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRV 450
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
++ +E + VHE+ +GD SHP ++IY ++ + ++++AGY P T VL DID++ K
Sbjct: 451 PGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSK 510
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+ AL HSE+LA++ GLL +PAR+ +RI KNLR C DCHSA+K+IS R+LI+RD R
Sbjct: 511 KRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNR 570
Query: 759 FHHFKDGLCSCRDYW 773
FHHF +G CSC+DYW
Sbjct: 571 FHHFSEGQCSCKDYW 585
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++N ++ Y+ + A +F +RD SW +MI+ +AK ++A++++ + +
Sbjct: 147 LVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRV 206
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG+ PD + V SACSA+G + G + + MK ++VDM G ++
Sbjct: 207 AGVAPDCISMVSVLSACSAMGALAIGA-EVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+L+ MP++ DV W ++
Sbjct: 266 NSLKVFHAMPVK-DVLTWSSMI 286
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 238/406 (58%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ + A+ + + D TF+ L++AC ALE+ + +H ++ +L
Sbjct: 1210 MISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLN 1269
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ MY++C +++DA +F R + SW+ MI G A++G ++A+ F
Sbjct: 1270 CAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFK 1329
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K G+ PD FIGV SACS G V E +F SM K+YGI P ++HY +VD L
Sbjct: 1330 YMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRA 1389
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++EA + I MP E ++ L+N CR+ + E G R AE + L+PS S A
Sbjct: 1390 GRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPS----DSAAY 1445
Query: 621 LVPVNASELAKEKEN-------------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
++ N A + EN KK + +++++KVH + AGD SH ETD IY
Sbjct: 1446 VLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIY 1505
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + +++E GY+P+T F L D+++E KE +L HSE+LA+++GL+ +P +R++
Sbjct: 1506 NKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVI 1565
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCHSA+K ISK+ RE+++RDA RFHHF++G+CSC DYW
Sbjct: 1566 KNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ L ++ G+ EA++ + ++ D TF ++ LE K +H V R
Sbjct: 905 KALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS 964
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ MY + S+ A SVF M E DL SW+TMI+G +GL E +V +F
Sbjct: 965 GLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMF 1024
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL--GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+ L PD V ACS+L G + +H +M G+V +++D+
Sbjct: 1025 VHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKA--GVVLDSFVSTALIDVY 1082
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
G ++EA EF+ D+ W + MHG + GD
Sbjct: 1083 SKRGKMEEA-EFLFVNQDGFDLASWNAI-----MHGYIVSGD 1118
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +A+ + L+++ D T +A G L++ K +H V +
Sbjct: 1110 MHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGF 1169
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + +G+L MY +C M+ A VFS + D +W TMI+G +NG E A+ + Q
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQ 1229
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ F + ACS L + +G +H + + P + S+VDM
Sbjct: 1230 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKC 1287
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G +++A ++ + W ++ HGN
Sbjct: 1288 GNIEDARGLFKRTNTR-RIASWNAMIVGLAQHGN 1320
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 59/122 (48%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K + + LL + +S T + + + C + + ++++H + ++ V
Sbjct: 740 KSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAG 799
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y++ + +A +F M RD+ W+ M+ + L +A+ +FS+F + G +P
Sbjct: 800 ALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRP 859
Query: 510 DD 511
DD
Sbjct: 860 DD 861
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Query: 412 TFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T + +++AC + A +H + L ++ +YS+ M++A +F N
Sbjct: 1038 TVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
DL SW+ ++ G+ +G A+ ++ +++G + D + A L + +G
Sbjct: 1098 QDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQG 1157
Query: 531 -MLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + + + ++ +V+ ++DM G ++ A ++P PD W +++
Sbjct: 1158 KQIHAVVVKRGF----NLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMIS 1212
Query: 588 LCRMHGNLE 596
C +G E
Sbjct: 1213 GCVENGQEE 1221
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 269/465 (57%), Gaps = 29/465 (6%)
Query: 325 DQSRRQYQQNPNEGQYQSY----SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGT 378
+ +R ++ P+ ++ SG + GM+ A + + K D+ + ++
Sbjct: 222 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA-------- 273
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+DG ++EG EA+E+ ++K+ I ++ AC + AL++ + +H + +R
Sbjct: 274 --MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKR 331
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L ++ MY++C +D A+ VF M+ ++++SW+ MI G A +G EDA+D+
Sbjct: 332 NSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDL 391
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+ + P++ F+GV +AC+ G V +G+ F SM K+YG+ P ++HY IVD+LG
Sbjct: 392 FSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 448
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G L EA + + +P EP VW L+ CR HGN+ELG+R +I+ +L+P
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 508
Query: 614 --NEKSKAGLVPV--NASELAKEKENKKLASQNLLEV-RSKVHEYRAGDTSHPETDKIYA 668
N +KAG +L KE+ K +++++ R +VH++ GD SHP+ IY
Sbjct: 509 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 568
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ ++ +++ GY P+ VL DID+E KE A+ HSE+LA+ GL+++ IRI+K
Sbjct: 569 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 628
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHSA K+IS++ RE+I+RD R+HHF++G CSC+D+W
Sbjct: 629 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
E +A E E + +ST+N ++ +S C ++ A F M ERD SW MI G+
Sbjct: 220 EVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYI 279
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
+ G +A++IF Q ++ ++P + V SAC+ LG + +G + +K I
Sbjct: 280 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRW-IHTYAKRNSIQLDG 338
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
S+VDM G +D A E EKM +V W ++ MHG E
Sbjct: 339 VLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAE 386
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 231/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +EA++ ++ Q F+ + +C +L+ + +H V R
Sbjct: 396 MISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYG 455
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MY+ C +D A +F NM D SW+ MI ++G G A+++F
Sbjct: 456 YESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFE 515
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+ PD F+ V SACS G V EG +F+SM YG+ P +HY I+D+L
Sbjct: 516 EMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRA 575
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G EA E +E MP EP +WE L+ CR+HGN++LG AE + +L P
Sbjct: 576 GKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLS 635
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + AG +L +++ KK + +EV +KVH + GD +HPE +IY +
Sbjct: 636 NMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLE 695
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M++ GY+P+T+ VLHD++ + KE L HSE+LAV++G + P A +R+ KNLR
Sbjct: 696 QLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLR 755
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A K +SK+VGRE+++RD KRFHHF+DG CSC DYW
Sbjct: 756 ICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 47/319 (14%)
Query: 326 QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGL 385
++R+ + + PN + S++ I G + + L+ K +F + + G
Sbjct: 210 EARKLFDEMPNRDEL-SWT-TIITGYVKNNDLDAAK---EFLNGTSKKLGVAWNAMISGY 264
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS---- 441
G EA E+ + I +D TF+ ++ C +A K +H + + ++
Sbjct: 265 AHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAP 324
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT-------------------- 481
+ + N ++ Y +C +D A +F+ M ERDL SW+
Sbjct: 325 DVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNE 384
Query: 482 -----------MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
MI+G A+ G E+A+ F++ K G +P D F G +CS LG + G
Sbjct: 385 MPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHG 444
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
LH + + YG S+ +++ M G +D A MP D W ++
Sbjct: 445 RQLHAQVVR--YGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAAL 501
Query: 590 RMHGNLELGDRCAEIVEQL 608
HG G + E+ E++
Sbjct: 502 GQHGQ---GTQAIELFEEM 517
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 245/399 (61%), Gaps = 10/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G+V EA+ ++ + D T ++ A + AK +H + R
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MYS+C ++ A +F +++R + +W+ MI G+ +GLG A+D+F + K
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ ++P+D ++ V SACS G V EG+ HF+SM +DYG+ PSM HY ++VD+LG G +
Sbjct: 544 KGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA +FIE MP+ P + V+ ++ C++H N+E+G++ A+ + +L+P +
Sbjct: 604 KEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIY 663
Query: 624 VNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ S+ +K E +K + +++E+R++VH + +G T+HP++ +IYA + L
Sbjct: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELV 723
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++K AGY+P+T +L D++ + +E+ L +HSE+LA++ GLL++ I + KNLRVCG
Sbjct: 724 YEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCG 782
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A K IS + GRE+I+RD +RFHHFK+G+CSC DYW
Sbjct: 783 DCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ G+ ++AI V + ++ I T + + AC D LE K VH+ V++L
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MYS+C +D A +F+N+ R SW+ MI G+A+NG +A++ FS
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ K G+KPD + V A + L + G++ + K+ + ++VD
Sbjct: 440 EMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVT------TALVD 493
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G + A + + M + V W +++ HG
Sbjct: 494 MYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGTHG 530
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K ++ A+ L + + + F+ L++ CGD L+ K +H +
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V G++ MY++C +DDA+ +F M ERDL SW+T+I GF++NG + A+++
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G +PD + V A + +G ++ G +H ++ + + ++ ++ DM
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIS--TALADMYSK 295
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ A + M + V W +M+
Sbjct: 296 CGSVETARLIFDGMDQKTVVS-WNSMMD 322
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G K+A+E++ ++ + D T ++ A D L K++H + R
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ + MYS+C S++ A +F M ++ + SW++M+ G+ +NG E A+ +F +
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ G+ P + AC+ LGD+ G
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ ++S+ S+++A VF + ++ + TM+ G+AKN E A+ + + +KP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 511 DQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F + C D+ G +H + ++ + ++ +V+M +D+A +
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA--ANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 570 IEKMPMEPDVDVWEKLM 586
++MP E D+ W ++
Sbjct: 205 FDRMP-ERDLVSWNTII 220
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 232/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V +KEA+++ +++ I DL T ++ AC AL+ H ++
Sbjct: 244 MIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 303
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ MYS+C + A VF+ M D+ SW+ MI G+ +GLG +A+ +F
Sbjct: 304 FATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFH 363
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
GLKPDD FI + S+CS G V+EG L F++MS+D+ IVP M+H + +VD+LG
Sbjct: 364 DLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRA 423
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G +DEA FI MP EPDV +W L++ CR+H N+ELG+ ++ ++ L P
Sbjct: 424 GLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLS 483
Query: 614 NEKSKAGLVPVNASELAKEKE--NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N S AG A +K+ KK+ + +E+ VH + GD SH + +I +
Sbjct: 484 NIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLE 543
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +MK GY E FV D+++E KE+ LL HSE+LA++ G+L+ A PI + KNLR
Sbjct: 544 ELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLR 603
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A+K ++ I RE+ +RDA RFHHFK+G C+C D+W
Sbjct: 604 VCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ L++AC +K+L EAK +H+H + S S + + ++Y C+ + A +F +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+ W+ +I +A NG + A+D++ G++P+ + V ACS L + +G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-V 129
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
S +K +G+ + ++VD G L EA M DV W ++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLY 188
Query: 593 GNLELGDRCAEIVEQLDPSRL--NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKV 650
G L D +++ Q+ + N + G++P L K + +N + + +
Sbjct: 189 G---LCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMI 245
Query: 651 HEYRAGDTSHPETD 664
Y A D D
Sbjct: 246 GGYVASDCMKEALD 259
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC A+E+ +H H + V ++ Y++C + +A +FS+M
Sbjct: 111 TYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM 170
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ RD+ +W+ MI G + GL +DAV + Q ++ G+ P+ +GV C L
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL 223
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 118/304 (38%), Gaps = 37/304 (12%)
Query: 312 FYQQDQNGGQYQWDQSRRQYQQN-PNEGQYQSYSGNIQNGMMASQ-----VLNNCK---H 362
+ + N W+Q R Y N P +G Y + G+ ++ VL C
Sbjct: 65 LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124
Query: 363 EDDFAEASRSSQNNG-------TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ 415
+D E ++ G +D K G + EA + + + D+ ++
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR----DVVAWNA 180
Query: 416 LMQACGDAKALEEA-KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
++ C ++A + + + E + P ST G+L C + A +F M R
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICP-NSSTIVGVLP---TCQCLLYARKIFDVMGVR 236
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVVE 529
+ SW MI G+ + ++A+DIF + +G+ PD +GV ACS L G
Sbjct: 237 NEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 296
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G L + D I ++ +DM G + A E +M D+ W ++
Sbjct: 297 GYLIVRGFATDTLICNAL------IDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGY 349
Query: 590 RMHG 593
+HG
Sbjct: 350 GIHG 353
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 238/420 (56%), Gaps = 14/420 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGD 422
DD AE S N+ + + G +A EV G+L+ + T S L+ AC
Sbjct: 251 DDMAEKDVVSWNS----MIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAH 306
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
AL +H+ V ++ V I+ MY +C + A + F M E+++ SW M
Sbjct: 307 EGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAM 366
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
I G+ +G +A+D+F Q AG+KP+ FI V +ACS G + EG F +MS +Y
Sbjct: 367 IAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYN 426
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA 602
+ P ++HY +VD+LG GY+ EA I+ M + D +W L+ CR+H ++EL + A
Sbjct: 427 VEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISA 486
Query: 603 EIVEQLDPSRLNEKSKAGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEY 653
+ +LDPS + +A L K++ K +L+E++ +VH +
Sbjct: 487 RELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVF 546
Query: 654 RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSH 713
GD HP+ +KIY + L +++EAGY+P VLHD+D+E KE + HSE+LAV+
Sbjct: 547 LVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAF 606
Query: 714 GLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
G+++S + I ++KNLRVCGDCH+ +K+ISKIV RE+I+RDAKRFHHFKDGLCSC DYW
Sbjct: 607 GVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
SVD ++ AC ++ VH ++ + N +L Y++C + +
Sbjct: 189 SVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRK 248
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALG 525
VF +M E+D+ SW++MI +A+NGL DA ++F K G K ++ + AC+ G
Sbjct: 249 VFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ GM + + K G V ++ SI+DM G + A + M E +V W +
Sbjct: 309 ALRVGMCLHDQVIK-MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMK-EKNVRSWTAM 366
Query: 586 MNLCRMHG 593
+ MHG
Sbjct: 367 IAGYGMHG 374
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH--VERLLSP 442
L + G E++ + K I + TF +++C L K H+ V S
Sbjct: 57 LARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESD 116
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L VS+ ++ MYS+C + +A +F + R++ +W ++ITG+ +N +A+ +F +F
Sbjct: 117 LFVSS--ALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEF 174
Query: 503 ---------KQAGLKPDDQIFIGVFSACSALGD--VVEGMLHFESMSKDYGIVPSMKHYV 551
++ G D I V SACS + + V EG+ ++ G+ M
Sbjct: 175 LFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV---HGVAIKVGLDKVMGVEN 231
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+++D G + + + + M E DV W ++ +
Sbjct: 232 TLLDAYAKCGEVSLSRKVFDDMA-EKDVVSWNSMIAV 267
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 466 SVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
++F+ +R D+ SW+++I A+ G +++ FS ++ +KP+ F +CSAL
Sbjct: 36 TLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95
Query: 525 GDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
D+ G H +++ +G + +++DM G L A +++P ++ W
Sbjct: 96 FDLNSGKQAHQQALV--FGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP-RRNIVTWT 152
Query: 584 KLMN 587
L+
Sbjct: 153 SLIT 156
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 253/428 (59%), Gaps = 14/428 (3%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
+N C E FA S + + G + + +A++++ + ++ +D TF+ +
Sbjct: 489 MNEC--EKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATI 546
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ AC LE VH R V + ++ MYS+C +D A F M R++
Sbjct: 547 LSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 606
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
SW++MI+G+A++G GE A+ +F++ G PD F+GV SACS +G V EG HF+S
Sbjct: 607 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKS 666
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-N 594
MS+ Y + P ++H+ +VD+LG G LDE +FI MPM+P+V +W ++ CR +G N
Sbjct: 667 MSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRN 726
Query: 595 LELGDRCAEIVEQLDP-SRLNEKSKAGLVP--------VNASELAKEKENKKLASQNLLE 645
ELG R AE++ +L+P + +N A + A KE KK A + +
Sbjct: 727 TELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVT 786
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
++ VH + AGD HPE D IY +R L +M++AGYIP+T++ L D++ E KEE L H
Sbjct: 787 MKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYH 846
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE++AV+ +L+ + PIRIMKNLRVCGDCHSA ISKIVGR++++RD+ RFHHF+DG
Sbjct: 847 SEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDG 905
Query: 766 LCSCRDYW 773
CSC DYW
Sbjct: 906 KCSCGDYW 913
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 428 EAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
+ + VH HV R L+ +V+ NG++ MY++ ++ DA SVF M E+D SW+++I+G
Sbjct: 322 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 381
Query: 487 AKNGLGEDAVDIFS 500
+N EDA ++FS
Sbjct: 382 DQNECSEDAAEMFS 395
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 445 VSTYNGILKMYSEC-DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY C DS +DA SVF + R+ SW+++I+ +++ G A D+FS +
Sbjct: 237 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 296
Query: 504 QAGL----KPDD 511
+ GL KP+D
Sbjct: 297 KEGLGFSFKPND 308
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+ + EEA+ +H + + N ++ +Y + A +F M
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ R+L +W +I+G+ +NG ++A F +AG P+ F AC
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 210
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 262/454 (57%), Gaps = 22/454 (4%)
Query: 332 QQNPNEGQYQS-YSGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKE 388
++ N G + SG + GM+ A ++ N K +++ + ++ +DG +K
Sbjct: 222 MEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSA----------MIDGYIKG 271
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G KEA+EV +++++ I S ++ AC + AL++ + +H +V +
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG 331
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C +D A+ VF M ++++ +W+ MI G +G EDA+++F + ++ +
Sbjct: 332 TALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR 391
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ +GV SAC+ G V EG+ F SM + YGI P M+HY +VD+LG G L EA E
Sbjct: 392 PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEE 451
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGL 621
+ MPMEP VW L+ CR HG++ELG+R +I+ +L+P N ++AG
Sbjct: 452 VMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGR 511
Query: 622 V--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
N +L KE+ K ++++ VHE++ GD SHP+ IY +++ + ++K
Sbjct: 512 WDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKM 571
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
G+ P T VL DI++E KE L HSE+LA++ GL+++ I ++KNLR+C DCHSA
Sbjct: 572 EGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSA 631
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+IS++ RE+I+RD R+HHFK G CSC+D+W
Sbjct: 632 FKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 248/405 (61%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G ++A+E+ + K+ + T + ++ +L+ + +H R
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG 442
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ VS N ++ MY++ S++DA VF+ + +RD +W +MI A++GLGE+A+ +F
Sbjct: 443 NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLF 502
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+KPD ++GV SAC+ +G V +G ++ M + I+P+ HY ++D+ G
Sbjct: 503 ERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGR 562
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L EA FIE MP+EPDV W L+ C++H N+EL + AE + ++P N + +
Sbjct: 563 AGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPE--NSGAYS 620
Query: 620 GLVPV--------NASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYA 668
L V NA+ + K ++K + + +++++KVH + D HP+ D IY
Sbjct: 621 ALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYE 680
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ + ++K+ G++P+T VLHD+++E KE+ L HSE+LA++ GL+ +P +RIMK
Sbjct: 681 MMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMK 740
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHSA+K ISK+VGRE+I+RDA RFHHFK+GLCSCRDYW
Sbjct: 741 NLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 45/235 (19%)
Query: 403 KQCISVDLP----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
++ +S D+P T + ++ +C + L + VH V + +S N +L MY++
Sbjct: 134 REMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKS 193
Query: 459 ----------DSM---------------------DDAFSVFSNMTERDLTSWDTMITGFA 487
D M D A F M ERD+ SW+ MI+G+
Sbjct: 194 GDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYN 253
Query: 488 KNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVP 545
++G +A+DIFS+ + KPD SAC+ L ++ G +H + ++
Sbjct: 254 QHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFG 313
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEK-MPMEPDVDVWEKLMNLCRMHGNLELGD 599
++ + +++ M +G ++ A + IE+ M DV + L++ G ++LGD
Sbjct: 314 AVGN--ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLD-----GYVKLGD 361
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 108/262 (41%), Gaps = 38/262 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G + G +EA+++ +L D T + + AC + + L+ K +H H+ R
Sbjct: 248 MISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT 307
Query: 439 --------------------------------LLSPLRVSTYNGILKMYSECDSMDDAFS 466
++S L V + +L Y + ++ A
Sbjct: 308 EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARR 367
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F ++ RD+ +W MI G+ +NG +DA+++F + G KP++ + S S+L
Sbjct: 368 IFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLAS 427
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G S ++ G S+ +++ M +G +++A + + D W ++
Sbjct: 428 LDHGRQIHASATRS-GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMI 486
Query: 587 NLCRMHGNLELGDRCAEIVEQL 608
HG LG+ + E++
Sbjct: 487 IALAQHG---LGEEALTLFERM 505
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
K++H + + L V N ++ Y++ + DA VF M + + SW+ +++G+AK
Sbjct: 33 KSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKG 92
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
G E+A +F + + PD + + + +G + F M D
Sbjct: 93 GRLEEAHRVFEEMPE----PDSVSWTAMIVGYNQMGQFENAIGMFREMVSD 139
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 230/371 (61%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++AC A+E +H + + V N ++ MY++C S+ +A VF +
Sbjct: 346 TYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDML 405
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ERD SW+ MI+G++ +GL +A+ F ++ P+ F+ + SACS G + G
Sbjct: 406 SERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SM +DYGI P M+HY +V +LG +G+LD+A++ IE++P+EP+V VW L+ C +
Sbjct: 466 NYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVI 525
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H +++LG A+ + Q+DP S + +++ + + K K KK +
Sbjct: 526 HNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLS 585
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E + VH + GDTSHP+ I ++ L + ++AGY+P+ VL D++ + K+ L
Sbjct: 586 WIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHL 645
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSERLA++ GL+ +P+R IRI+KNLR+C DCHSA+K+ISKIV R++IIRD RFHHF
Sbjct: 646 WVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHF 705
Query: 763 KDGLCSCRDYW 773
+DG+CSC DYW
Sbjct: 706 QDGICSCGDYW 716
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+E+ G + + + + TF+ ++Q+C + L+ K VH HV ++ V N +
Sbjct: 225 REAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNAL 284
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y++C +D++ +F + R+ +W+TMI G+ ++G G+ A+ ++ + ++ +
Sbjct: 285 MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASE 344
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV---SIVDMLGSTGYLDEAL 567
+ V AC++L + G +H S+ Y K V +++DM G + A
Sbjct: 345 VTYSSVLRACASLAAMELGTQIHSLSLKTIYD-----KDVVVGNALIDMYAKCGSIKNA- 398
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ M E D W +++ MHG
Sbjct: 399 RLVFDMLSERDEISWNAMISGYSMHG 424
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ +++AC +A K+VH V + + + G+L +Y++ +D VF M
Sbjct: 144 TFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEM 203
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ D+ W MI+ +A++ +AV++F Q ++A + P+ F V +C+++ ++ G
Sbjct: 204 PKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGK 263
Query: 532 ---LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
H + D + S +++D+ G LD +++ ++P +V W ++
Sbjct: 264 QVHCHVLKVGLDGNVFVSN----ALMDVYAKCGRLDNSMKLFMELPNRNEV-TWNTMI 316
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 102/220 (46%), Gaps = 10/220 (4%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
R++ + TL Q G V+ ++ E +++ + ++ ++ F+ +++ + E A
Sbjct: 4 RNTVSFVTLIQ--GYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
++H + +L ++ Y+ C S++ A F + +D+ SW M+ +A+N
Sbjct: 62 SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKH 549
+D++ +F++ + G P+ F GV AC L G +H + Y M
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCY----EMDL 177
Query: 550 YVSI--VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
YV + +D+ G ++ L E+MP + DV W +++
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMIS 216
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 226/373 (60%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++AC ALE VH + + V+ N ++ MY++C S+ DA +F +
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD SW+ +I G++ +GLG +A+ +F+ K+ KPD+ F+GV SACS G + EG
Sbjct: 411 DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGK 470
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM +DYGI P M+HY +V ++G +G LD+A++FIE +P EP V +W L+ C +
Sbjct: 471 QYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVI 530
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-----------SELAKEKENKKLAS 640
H ++ELG A+ V +L+P +E S L + A + K K KK
Sbjct: 531 HNDVELGRISAQRVLELEPR--DEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPG 588
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E + VH + DTSH + I ++ L + ++AGY P+ VL D++ + KE
Sbjct: 589 LSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKER 648
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSERLA++ GL+ PA PIRI+KNLR+C DCHS +K+ISKIVGR++I+RD RFH
Sbjct: 649 LLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFH 708
Query: 761 HFKDGLCSCRDYW 773
HF++G CSC DYW
Sbjct: 709 HFENGSCSCADYW 721
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 343 YSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLG 399
Y ++ G+ ++ C DD A N + + + G+ ++A+E+
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+ + + + TFS ++QA D ++L+ +K +H H + V N ++ Y++C
Sbjct: 238 QMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG 297
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
++ + +F +++R+ SW+T+I + + G GE A+ +FS + ++ + + +
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 520 ACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
AC+ L + G+ +H + YG ++ + +++DM G + +A + + +
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDARFMFDMLDLRDK 415
Query: 579 VDVWEKLMNLCRMHG 593
V W ++ MHG
Sbjct: 416 VS-WNAIICGYSMHG 429
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + K EA E+ L + ++ F+ +++ + E + VH V ++
Sbjct: 18 IHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGY 77
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ YS + A VF ++ +D+ SW MI +A+N +A++ FSQ
Sbjct: 78 GSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQ 137
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ AG KP++ F GV AC L + G +H + +Y + V ++++
Sbjct: 138 MRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE--RDLYVGVGLLELYTRC 195
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G D+A MP + DV W +++
Sbjct: 196 GDNDDAWRAFGDMP-KNDVIPWSFMIS 221
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 242/394 (61%), Gaps = 14/394 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNG 450
KEA+ + +++ + + TF ++ AC AL+ K +H ++++ L S +
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTS 406
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C +++ A VF+ M + L SW+ MI+G A +G A+++F Q + G +PD
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
D F+GV SACS G V G F SM +DY I P ++HY ++D+LG G DEA +
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--- 627
+ M M+PD +W L+ CR+HGN+ELG+ A+ + +L+P N + L + A+
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPE--NPGAYVLLSNIYATAGR 584
Query: 628 --ELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
++A+ +K KK+ + +EV S VHE+ GD H ++ IY ++ + +++
Sbjct: 585 WDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEK 644
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG++P+T VL+D+D+E KE +L HSE+LA++ GL+S+ IRI+KNLRVCG+CHSA
Sbjct: 645 AGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSA 704
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K+ISKI RE+I RD RFHHFKDG CSC DYW
Sbjct: 705 IKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 109/216 (50%), Gaps = 5/216 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G+ +EA+ +++ ++ + T ++ AC + +LE V +E
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG 294
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S LR+ N ++ MYS+C +D A +F + E+D+ SW+ MI G++ ++A+ +
Sbjct: 295 LGSNLRL--VNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + +Q+ ++P+D F+ + AC+ LG + G + K + + + + S++DM
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYA 412
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G ++ A + M + W +++ MHG+
Sbjct: 413 KCGNIEAAKQVFAGMK-PKSLGSWNAMISGLAMHGH 447
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL------------------------------LS 441
TF L+++C A +E K +H HV +L S
Sbjct: 134 TFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKS 193
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
LR ++ ++ Y+ +DDA +F + RD SW+ MI G+A++G E+A+ F
Sbjct: 194 SLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQ 253
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K+A + P++ + V SAC+ G + G S +D+G+ +++ +++DM
Sbjct: 254 EMKRANVAPNESTMVTVLSACAQSGSLELGNW-VRSWIEDHGLGSNLRLVNALIDMYSKC 312
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G LD+A + E + E D+ W ++
Sbjct: 313 GDLDKARDLFEGI-CEKDIISWNVMI 337
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/405 (40%), Positives = 240/405 (59%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
++G + G ++A+ + +LE+ DL S L+ AC AL+ + +H ++
Sbjct: 276 MINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALL-ACTKIGALQVGERIHNYLSSN 334
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L ++ MY++C ++ A VF +DL +W MI G+A +G + A+ F
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ K AG+ PD+ IF+ + +ACS G+V +G+ FESM DY I P+MKHY IVD+LG
Sbjct: 395 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGR 454
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G LDEAL FI+ MP+ PD +W L CR H N+E+ + AE + QL+P + S
Sbjct: 455 AGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPK--HPGSYV 512
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L V A+ L K + +K + +EV +VH + AGD +H ++I
Sbjct: 513 FLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISL 572
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ + A K+ GY+PET +VLH+I++E KE+AL +HSE+LA++ GL+S+ + IRI+K
Sbjct: 573 KLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVK 632
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCHS +K SK+ RE+I+RD KRFHHFKDG CSC DYW
Sbjct: 633 NLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNM 471
++ L+ C L +A ++ E + P R ++N ++ + +D A +F M
Sbjct: 211 WNVLINGCCKVGDLSKAASLFEAM-----PERNAGSWNSLINGFVRNGDLDRARELFVQM 265
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+++ SW TMI GF++NG E A+ +F + + G++P+D + AC+ +G + G
Sbjct: 266 PEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGE 325
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE-FIEKMPMEPDVDVWEKLMNLCR 590
+S + G + ++VDM G + A F+E D+ W ++
Sbjct: 326 RIHNYLSSN-GFQLNRGIGTALVDMYAKCGNIKSASRVFVET--KGKDLLTWSVMIWGWA 382
Query: 591 MHGNLELGDRC 601
+HG + +C
Sbjct: 383 IHGCFDQALQC 393
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S+D A S+F +L ++ +I G A+N E +V F + ++PD V
Sbjct: 87 SLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLK 146
Query: 520 ACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME-- 576
+ +AL DV G LH M G+ VS+VDM G L L+ ++ P
Sbjct: 147 SVAALVDVGLGRCLHGGVM--KLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNK 204
Query: 577 -PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
+ +W L+N C G+L + A + E + P R
Sbjct: 205 AESILLWNVLINGCCKVGDL---SKAASLFEAM-PER 237
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 229/391 (58%), Gaps = 10/391 (2%)
Query: 393 EAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
EA+EV G++ + + T S ++ AC A AL K +H+ V ++ V I
Sbjct: 2208 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 2267
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C ++ A F M E+++ SW M+ G+ +G ++A+DIF + +AG+KP+
Sbjct: 2268 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 2327
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V +ACS G V EG F +M Y I P ++HY +VD+ G G L+EA I+
Sbjct: 2328 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 2387
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE--- 628
+M M+PD VW L+ CR+H N++LG+ A+ + +LDP + +A
Sbjct: 2388 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 2447
Query: 629 ------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
L K ++ K +L+E++ +VH + GD HP + IY + L ++++ GY
Sbjct: 2448 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 2507
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P VLHD+D+E KE L HSE+LAV+ G+++S I I+KNLRVCGDCH+ +K+
Sbjct: 2508 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 2567
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+V R+ ++RD+KRFHHFKDG+CSC DYW
Sbjct: 2568 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 107/188 (56%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G ++ + +EA+E+ ++ + I + T L++AC + L + +H++ +
Sbjct: 228 MINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC 287
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ MYS+C S+ DA VF M + L +W++MIT +GLG++A+++FS
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFS 347
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ +KPD FIGV AC + +V EG +F M++ YGI P +HY + ++ +
Sbjct: 348 EMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARS 407
Query: 561 GYLDEALE 568
LDEA +
Sbjct: 408 NNLDEAFK 415
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 48/252 (19%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
Q I+ D TF +++AC + +++ K VH + + V N ++ Y +C
Sbjct: 119 QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 464 AFSVFSNMTERDLTSWDT-------------------------------MITGFAKNGLG 492
A VF M R++ SW T MI G+ +N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV 551
E+A+++F + + + P++ + + AC+ +G + G +H DY I ++ V
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH------DYAIKNCIEIGV 292
Query: 552 ----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
+++DM G + +A+E E MP + + W ++ +HG LG + +
Sbjct: 293 YLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHG---LGQEALNLFSE 348
Query: 608 LDPSRLNEKSKA 619
++ R+N K A
Sbjct: 349 ME--RVNVKPDA 358
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ L K + +F +++C L + H+
Sbjct: 1990 LARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETD 2049
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MYS+C + DA ++F + R++ SW +MITG+ +N ++A+ +F F +
Sbjct: 2050 LFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLE 2109
Query: 505 A--------GLKPDDQIFIGVFSACS 522
+ D + + V SACS
Sbjct: 2110 EETEVEDGNNVPLDSVVMVSVLSACS 2135
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ +D ++ AC + VH V + + N ++ Y++C +
Sbjct: 2120 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 2179
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSAL 524
VF M E+D SW++MI +A++GL +A+++F + G++ + V AC+
Sbjct: 2180 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 2239
Query: 525 GDVVEG-MLHFESMSKD--YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
G + G +H + + D Y + SI+DM G ++ A + ++M E +V
Sbjct: 2240 GALRAGKCIHDQVIKMDLEYNVCVG----TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKS 2294
Query: 582 WEKLMNLCRMHG 593
W ++ MHG
Sbjct: 2295 WTAMVAGYGMHG 2306
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFES 536
SW+++I A+ G +A+ FS ++ GL P F +CSAL D+V G M H ++
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G + +++DM G L +A +++P+ +V W ++
Sbjct: 2042 FV--FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMIT 2089
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 225/372 (60%), Gaps = 10/372 (2%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P + L+ CG A + + +H +L + N ++ MY +C D +F
Sbjct: 552 PILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFDL 610
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M ERD+ +W+T+ITG+A++GLG +A+ ++ + AG+ P++ F+G+ +ACS G V EG
Sbjct: 611 MEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG 670
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F+SMS+DYG+ P +HY +VD+LG TG + A +FI MP+EPD +W L+ C+
Sbjct: 671 WKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACK 730
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ--------- 641
+H N E+G R AE + +++PS + + + E +K+ Q
Sbjct: 731 IHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGC 790
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +++ K+H + GD H + ++I A + L +K GY+P+T FVLHDID+E KE +
Sbjct: 791 SWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESS 850
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
LL HSE+LAV++ LL++P PI+I+KNLR+CGDCH+ +K +S + R++ IRD RFHH
Sbjct: 851 LLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHH 910
Query: 762 FKDGLCSCRDYW 773
F++G CSC D+W
Sbjct: 911 FRNGSCSCEDFW 922
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 23/272 (8%)
Query: 325 DQSRRQYQQNPNEGQYQSY----SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGT 378
D +R ++Q P E S+ +G +QNGM+ A ++ + + + A
Sbjct: 339 DDARILFEQIP-EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG-------- 389
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G+ +EA+ +L L + + L + + + AC + ALE VH +
Sbjct: 390 --MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MY +C +M+ A VFS M +D+ SW++ + +N L ++A +
Sbjct: 448 VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNT 507
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI--VPSMKHYVSIVDM 556
F L DD + + SA + E M F++M ++ + P + + +
Sbjct: 508 FDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
LG++ + K+ M+ ++ V L+++
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISM 595
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQAC----GDAKALEEAKAVHEHV 436
L G + G+V EA V G+LE+ ++ + M +C GD + A+ + + +
Sbjct: 103 LSGYGRLGRVLEARRVFDGMLERNTVAWNA------MISCYVQNGD---ITMARRLFDAM 153
Query: 437 ERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
P R VS++N +L Y M DA ++F M ER+L SW MI+G+ + A
Sbjct: 154 -----PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALG--DVVEGMLHFESMSKDYGIVPSMKHYVSI 553
DIF + + GL PD F SA LG DV+E + ++ G + +I
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL---RVLALKTGFERDVVIGTAI 265
Query: 554 VDMLG-STGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++ T LD A++F E M +E + W ++
Sbjct: 266 LNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMI 298
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ AI V + I+ + L Q CG +++A+ + E + P+ VS +
Sbjct: 305 GRIDAAIAVYERDPVKSIACRTALITGLAQ-CGR---IDDARILFEQIPE---PIVVS-W 356
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y + +++A +F M R+ SW MI G+A+NG E+A+ + + ++G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 509 PDDQIFIGVFSACS 522
P +F ACS
Sbjct: 417 PSLSSLTSIFFACS 430
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 449 NGILKMYS-ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
IL +YS + +D A F +M ER+ +W TMI + G + A+ ++ + +
Sbjct: 263 TAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI 322
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ G+ + G + + + FE + + P + + +++ G ++EA
Sbjct: 323 ACRTALITGL----AQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAK 373
Query: 568 EFIEKMP 574
E +KMP
Sbjct: 374 ELFDKMP 380
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
+A VF M RD+ +W++MI+ + NG+ + A D++ ++ + G
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY----G 107
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
LG V+E F+ M + + + +++ G + A + MP DV W
Sbjct: 108 RLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFDAMP-SRDVSSW 161
Query: 583 EKLMN 587
++
Sbjct: 162 NSMLT 166
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 225/372 (60%), Gaps = 10/372 (2%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P + L+ CG A + + +H +L + N ++ MY +C D +F
Sbjct: 552 PILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSR-RIFDL 610
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M ERD+ +W+T+ITG+A++GLG +A+ ++ + AG+ P++ F+G+ +ACS G V EG
Sbjct: 611 MEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG 670
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F+SMS+DYG+ P +HY +VD+LG TG + A +FI MP+EPD +W L+ C+
Sbjct: 671 WKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACK 730
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ--------- 641
+H N E+G R AE + +++PS + + + E +K+ Q
Sbjct: 731 IHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGC 790
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +++ K+H + GD H + ++I A + L +K GY+P+T FVLHDID+E KE +
Sbjct: 791 SWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESS 850
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
LL HSE+LAV++ LL++P PI+I+KNLR+CGDCH+ +K +S + R++ IRD RFHH
Sbjct: 851 LLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHH 910
Query: 762 FKDGLCSCRDYW 773
F++G CSC D+W
Sbjct: 911 FRNGSCSCEDFW 922
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 23/272 (8%)
Query: 325 DQSRRQYQQNPNEGQYQSY----SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGT 378
D +R ++Q P E S+ +G +QNGM+ A ++ + + + A
Sbjct: 339 DDARILFEQIP-EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAG-------- 389
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G+ +EA+ +L L + + L + + + AC + ALE VH +
Sbjct: 390 --MIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MY +C +M+ A VFS M +D+ SW++ + +N L ++A +
Sbjct: 448 VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNT 507
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI--VPSMKHYVSIVDM 556
F L DD + + SA + E M F++M ++ + P + + +
Sbjct: 508 FDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGS 563
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
LG++ + K+ M+ ++ V L+++
Sbjct: 564 LGASKIGQQIHTVAIKLGMDSELIVANALISM 595
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQAC----GDAKALEEAKAVHEHV 436
L G + G+V EA V G+LE+ ++ + M +C GD + A+ + + +
Sbjct: 103 LSGYGRLGRVLEARRVFDGMLERNTVAWNA------MISCYVQNGD---ITMARRLFDAM 153
Query: 437 ERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
P R VS++N +L Y M DA ++F M ER+L SW MI+G+ + A
Sbjct: 154 -----PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALG--DVVEGMLHFESMSKDYGIVPSMKHYVSI 553
DIF + + GL PD F SA LG DV+E + ++ G + +I
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL---RVLALKTGFERDVVIGTAI 265
Query: 554 VDMLG-STGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++ T LD A++F E M +E + W ++
Sbjct: 266 LNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMI 298
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ AI V + I+ + L Q CG +++A+ + E + P+ VS +
Sbjct: 305 GRIDAAIAVYERDPVKSIACRTALITGLAQ-CGR---IDDARILFEQIPE---PIVVS-W 356
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y + +++A +F M R+ SW MI G+A+NG E+A+ + + ++G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 509 PDDQIFIGVFSACS 522
P +F ACS
Sbjct: 417 PSLSSLTSIFFACS 430
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 449 NGILKMYS-ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
IL +YS + +D A F +M ER+ +W TMI + G + A+ ++ + +
Sbjct: 263 TAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI 322
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ G+ + G + + + FE + + P + + +++ G ++EA
Sbjct: 323 ACRTALITGL----AQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAK 373
Query: 568 EFIEKMP 574
E +KMP
Sbjct: 374 ELFDKMP 380
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
+A VF M RD+ +W++MI+ + NG+ + A D++ ++ + G
Sbjct: 52 EAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY----G 107
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
LG V+E F+ M + + + +++ G + A + MP DV W
Sbjct: 108 RLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFDAMP-SRDVSSW 161
Query: 583 EKLMN 587
++
Sbjct: 162 NSMLT 166
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 237/391 (60%), Gaps = 12/391 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E + + + P + L+ CG + + + +H + + N ++
Sbjct: 533 EAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALM 592
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C D + VF +M ERD+ +W+T ITG A++GLG +A+ ++ + G+ P++
Sbjct: 593 SMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEV 651
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+G+ +ACS G V EG F+SMS+DYG+ P ++HY +VD+LG TG + A +FI
Sbjct: 652 TFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYD 711
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVN 625
MP+EPD +W L+ C++H N E+G R AE + +PS N S G+ V
Sbjct: 712 MPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMW-VE 770
Query: 626 ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+EL K + + ++ + + +++R+KVH + GD H + ++I ++ L ++ GY
Sbjct: 771 VAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGY 830
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+T FVLHDID+E KE +LL HSE+LAV++GLL +P PI+IMKNLR+CGDCH+ +K
Sbjct: 831 VPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKF 890
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+S + R++ IRD RFHHF++G CSC D+W
Sbjct: 891 VSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 139/344 (40%), Gaps = 63/344 (18%)
Query: 326 QSRRQYQQNPNE---GQYQSYSGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLE 380
++R ++Q P+ +G +QNGM+ A ++ + + + A
Sbjct: 339 EARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAG---------- 388
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH------- 433
+ G + G+ +EA+++L L + + L + + AC ALE + VH
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAG 448
Query: 434 ---------------------EHVERLLSPLRVS---TYNGILKMYSECDSMDDAFSVFS 469
E+V ++ + +RV ++N + + + ++DA +F
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
NM RD+ SW T+I+ +A+ G++AV+ F KP+ I + S C LG
Sbjct: 509 NMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKL 568
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G +++ +G+ + +++ M G D F + M E D+ W + C
Sbjct: 569 GQ-QIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKVF-DSME-ERDIFTWNTFITGC 625
Query: 590 RMHGNLELGDRCAEIVEQLDP-----------SRLNEKSKAGLV 622
HG LG ++ E ++ LN S AGLV
Sbjct: 626 AQHG---LGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLV 666
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ AI V G + I P+ + L+ + EA+ + E + P+ VS +
Sbjct: 304 GRIDAAIAVYGRDPVKSI----PSQTALLTGLARCGRITEARILFEQIP---DPIVVS-W 355
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y + +D+A +F M R+ SW MI G+A+NG E+A+D+ + G+
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 509 PDDQIFIGVFSACSALGDVVEG 530
P F ACS +G + G
Sbjct: 416 PSLSSLTSSFLACSHIGALETG 437
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+++N ++ Y M DA+++F M +R+L +W MI+G+ + DIF
Sbjct: 157 VTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHH 216
Query: 505 AGLKPDDQIFIGVFSACSALGDV 527
G PD F V SA + L D+
Sbjct: 217 EGASPDQSNFASVLSAVTGLQDL 239
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE------- 437
L + G+++EA EV + + D+ ++ ++ A ++ LE+A+ + + +
Sbjct: 43 LARLGRLREAREVFDAMPHR----DIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTA 98
Query: 438 -----------RLLSPLRV---------STYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
R+L RV +N ++ Y + + A +F M RD+T
Sbjct: 99 TILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVT 158
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSACSALGDVVEGMLHFES 536
SW++M+TG+ + DA ++F Q Q L + G V G + M+H E
Sbjct: 159 SWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEG 218
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
S D S+ +S V L G L+ + K E DV + ++N+
Sbjct: 219 ASPDQSNFASV---LSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNV 267
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 10/195 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + + ++ ++ + S D F+ ++ A + L + + V +
Sbjct: 194 MISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTG 253
Query: 441 SPLRVSTYNGILKMYS-ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V IL +Y+ + ++D A F M ER+ +W TMI + G + A+ ++
Sbjct: 254 FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY 313
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + + G+ + G + E + FE + P + + +++
Sbjct: 314 GRDPVKSIPSQTALLTGL----ARCGRITEARILFEQIPD-----PIVVSWNAMITGYMQ 364
Query: 560 TGYLDEALEFIEKMP 574
G +DEA E ++MP
Sbjct: 365 NGMVDEAKELFDRMP 379
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
++VH +++ S ++ ++ + + +A VF M RD+ +W++MI+ +
Sbjct: 24 VRSVHRALDK-------SAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCN 76
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
+G+ EDA +F ++ + G + LG V++ F+ M + +
Sbjct: 77 SGMLEDARILFDAISGGNVRTATILLSGY----ARLGRVLDARRVFDGMPERNTVA---- 128
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ ++V G + A + MP DV W ++
Sbjct: 129 -WNAMVSCYVQNGDITMARRLFDAMP-SRDVTSWNSMVT 165
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 238/412 (57%), Gaps = 11/412 (2%)
Query: 373 SQNNGTLEQLDGLVKEGK-VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
++++GT + + ++ + + EA+ + + I + +F ++ C + +
Sbjct: 295 ARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+H + R V + ++ MY +C ++D A VF+ +D+ W++MITG+A++GL
Sbjct: 355 LHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGL 414
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
GE+A+ IF + A + PD +IGV +ACS G V EG F SM + I HY
Sbjct: 415 GEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYS 474
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
+VD+LG G +DEAL+ I MP+EPD +W LM CRMH N E+ + A+ + +L+P
Sbjct: 475 CMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPG 534
Query: 612 RLNEKSKAGLVPVNASELAKEKENKK-LASQNL--------LEVRSKVHEYRAGDT-SHP 661
+ + + +K ++S+NL +E VH + +GD SHP
Sbjct: 535 SAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHP 594
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
E I ++ L + E+GY + FVLHD+D+E K ++L HSER AV++GLL PA
Sbjct: 595 EHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAG 654
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIR+MKNLRVCGDCHSA+K+I+KI RE+I+RDA RFHHFKDGLCSCRDYW
Sbjct: 655 MPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 9/171 (5%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ + + +D A ++F M RD +W MI + +N +A+ F +
Sbjct: 267 VAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLC 326
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P+ FI + + C+AL G LH + + + +++ M G L
Sbjct: 327 RGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDT--DVFAVSALITMYIKCGNL 384
Query: 564 DEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
D+A EP DV +W ++ HG LG+ I + L +R+
Sbjct: 385 DKAKRVFNM--FEPKDVVMWNSMITGYAQHG---LGEEALGIFDDLRLARM 430
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G + +AI + + ++ + T++ L+ DA + EA+ + + +
Sbjct: 119 LRGYVRHGLLADAIRLFHQMPER----NHVTYTVLLGGFLDAGRVNEARKLFDE----MP 170
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
V +L Y + + +A ++F M +R++ SW MI+G+A+NG
Sbjct: 171 DKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNG 219
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G+V EA ++ + + D+ + ++ A + EA+A+ + +
Sbjct: 150 LGGFLDAGRVNEARKLFDEMPDK----DVVARTAMLSGYCQAGRITEARALFDEM----- 200
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R V ++ ++ Y++ + A +F M +R+ SW M+ G+ + G EDA D+F+
Sbjct: 201 PKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFN 260
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-------GDVVEGMLHFESM-SKDYGIVPSMKHYVS 552
PD + +AC+A+ G V FE M ++D G + +
Sbjct: 261 AM------PDHPV-----AACNAMMVGFGQHGMVDAAKAMFERMCARDDGT------WSA 303
Query: 553 IVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLC 589
++ + +L EAL +M + P+ + ++ +C
Sbjct: 304 MIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVC 343
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 242/421 (57%), Gaps = 17/421 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S S N + G + G ++AI + ++K S + T + ++ AC
Sbjct: 378 DESPEKSLPSWN----AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 424 KALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL K VH+ V S + VST ++ MY++C S+ +A +F MT+++ +W+T
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVST--ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +G G++A++IF + +G+ P F+ V ACS G V EG F SM Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G PS+KHY +VD+LG G+L AL+FIE M +EP VWE L+ CR+H + L
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 602 AEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHE 652
+E + +LDP S ++ + + AK+++ K L+E+ H
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ +GD SHP+ +IY + L +M+EAGY PET LHD+++E +E + HSERLA++
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GL+++ IRI+KNLRVC DCH+ K+ISKI R +++RDA RFHHFKDG+CSC DY
Sbjct: 732 FGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDY 791
Query: 773 W 773
W
Sbjct: 792 W 792
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 431 AVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
A+H + + LS VST + +YS+ + ++ A +F E+ L SW+ MI+G+ +
Sbjct: 340 AIHGYCLKSNFLSHASVST--ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSM 547
NGL EDA+ +F + +++ P+ + SAC+ LG + G +H S D+ S+
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE--SSI 455
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+++ M G + EA + M + +V W +++ +HG
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHG 500
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKP 509
I+KMY + ++DA VF M E+D W+TMI+G+ KN + +++ +F ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D + + A + L ++ GM S++ G + + G +
Sbjct: 220 DTTTLLDILPAVAELQELRLGM-QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
+ +PD+ + +++ +G EL + + L +RL + LVPV+
Sbjct: 279 FREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGARLRSSTLVSLVPVS 332
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 243/405 (60%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ KEA+++ ++ + D + + + AC ALE+ K +H ++ +
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK-- 275
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ +R+ + G ++ MY++C M++A VF N+ ++ + +W +I+G+A +G G +A+
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + ++ G+KP+ F V +ACS G V EG L F SM +DY + P+++HY IVD+LG
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
G LDEA FI++MP++P+ +W L+ CR+H N+ELG+ EI+ +DP
Sbjct: 396 RAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVH 455
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ ++ K L KE+ K+ + + + HE+ AGD SHPE +KI +
Sbjct: 456 KANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSK 515
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL-AHSERLAVSHGLLSSPARAPIRIMK 728
R +R +++E GY+PE +L D+ + + EA++ HSE+LA+++GL+ + IRIMK
Sbjct: 516 WRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMK 575
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH K+ISKI R++++RD RFHHF+DG CSC DYW
Sbjct: 576 NLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV--------------------------------ERL 439
TF L++AC + A EE +H + +R+
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P VS +N ++K Y + MD A ++F M E++ SW TMI+G+ + + ++A+ +F
Sbjct: 177 PEPDDVS-WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + + ++PD+ SAC+ LG + +G ++K + S+ V ++DM
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV-LIDMYAK 294
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G ++EALE + + + V W L++ HG+
Sbjct: 295 CGEMEEALEVFKNIK-KKSVQAWTALISGYAYHGH 328
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 236/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V++GK +E I V + + + D TF+ +++AC + ++ + +H + R
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR-- 471
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S + Y+G +L Y++C M DA F M ER+ SW+ +I+ +A+NG + ++
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q Q+G KPD F+ V SACS G V E + HF SM++ Y + P +HY S+VD+L
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL----DPSRLN 614
G DEA + + +MP EP +W ++N CR+H N EL + A+ + + D +
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651
Query: 615 EKSKAGLVPVNASELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S V +AK K+ +K+ + + +E++ + H + A D SHPE KI
Sbjct: 652 NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILR 711
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
I L +M++ GY P+T LHD+D+ K E+L HSER A++ L+++P +PI +MK
Sbjct: 712 KINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMK 771
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR C DCH+A+K+IS+IV RE+I+RD+ RFHHFKDG+CSC DYW
Sbjct: 772 NLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ + KEA + + + I D T L+ G+ + +H HV +L
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ Y + + A +F +M +D ++++++TG++ GL E+A+++F +
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+G+KP D F + SA L D G
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ KE+ ++ L+ F+ L+ + L + +H + +
Sbjct: 321 GQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE 380
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C+ +A +F N+ + W MI+ + + G E+ +++FS ++ G+
Sbjct: 381 NALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F + AC+ L + G S+ G + ++ +++D G + +A++
Sbjct: 441 ADQATFASILRACANLASISLGR-QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+MP V W L++ +GN++
Sbjct: 500 SFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G EG +EAIE+ L I TF+ L+ A + + VH V +
Sbjct: 213 MTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +L YS+ D +D+ +F M E D S++ +IT +A NG +++ D+F +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 502 FK 503
+
Sbjct: 333 LQ 334
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 426 LEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
LE VH H V + + N ++ + + + A +F M ER SW +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD------VVEGMLHFESMS 538
G+ ++ ++A +++ ++ G++PD ++ + + S G+ +V+ H +
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+Y ++ S+VD T L A + + M + D + LM
Sbjct: 171 YEYNLMVCN----SLVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMT 214
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 235/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V++GK +E I V + + + D TF+ +++AC + ++ + +H + R
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR-- 471
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S + Y+G +L Y++C M DA F M ER+ SW+ +I+ +A+NG + ++
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q Q+G KPD F+ V SACS G V E + HF SM++ Y + P +HY S+VD+L
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRLN 614
G DEA + + +MP EP +W ++N CR+H N EL DR + + D +
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651
Query: 615 EKSKAGLVPVNASELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S V +AK K+ +K+ + + +E++ + H + A D SHPE KI
Sbjct: 652 NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILR 711
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
I L +M++ GY P+T LHD+D+ K E+L HSER A++ L+++P +PI +MK
Sbjct: 712 KINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMK 771
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR C DCH+A+K+IS+IV RE+I+RD+ RFHHFKDG+CSC DYW
Sbjct: 772 NLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ + KEA + + + I D T L+ G+ + +H HV +L
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGY 171
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ Y + + A +F +M +D ++++++TG++ GL E+A+++F +
Sbjct: 172 EYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE 231
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+G+KP D F + SA L D G
Sbjct: 232 LHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ KE+ ++ L+ F+ L+ + L + +H + +
Sbjct: 321 GQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE 380
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C+ +A +F N+ + W MI+ + + G E+ +++FS ++ G+
Sbjct: 381 NALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F + AC+ L + G S+ G + ++ +++D G + +A++
Sbjct: 441 ADQATFASILRACANLASISLGR-QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+MP V W L++ +GN++
Sbjct: 500 SFGEMPERNSVS-WNALISAYAQNGNVD 526
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G EG +EAIE+ L I TF+ L+ A + + VH V +
Sbjct: 213 MTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNF 272
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +L YS+ D +D+ +F M E D S++ +IT +A NG +++ D+F +
Sbjct: 273 VWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 502 FK 503
+
Sbjct: 333 LQ 334
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 426 LEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
LE VH H V + + N ++ + + + A +F M ER SW +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD------VVEGMLHFESMS 538
G+ ++ ++A +++ ++ G++PD ++ + + S G+ +V+ H +
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+Y ++ S+VD T L A + + M + D + LM
Sbjct: 171 YEYNLMVCN----SLVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMT 214
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 241/400 (60%), Gaps = 9/400 (2%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + G V G ++A+++ + + + T++ + ACG+ AL+ + +H H+ +
Sbjct: 403 MVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ 462
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S N +L MY++C +++DA VF M D SW+ MI+ ++G G +A+++
Sbjct: 463 CGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALEL 522
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q G+ PD F+ + +AC+ G V EG +FESM +D+GI P HY ++D+LG
Sbjct: 523 FDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLG 582
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRL- 613
+G + EA + I+ MP EP +WE +++ CR +G++E G D+ ++ Q D + +
Sbjct: 583 RSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYIL 642
Query: 614 --NEKSKAG--LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N S AG + +L +++ KK + +EV SK+H + GDT HPE ++Y
Sbjct: 643 LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQF 702
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + A+M++ GY+P+T+FVLHD++ KE L AHSE+LAV GLL P A + ++KN
Sbjct: 703 LEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKN 762
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
LR+CGDCH+A+ +SK VGRE+++RD +RFHHFKDG CSC
Sbjct: 763 LRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V+ G +A E+ + + + +D TF+ ++ AC +A K+VH + RL
Sbjct: 269 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 328
Query: 440 --------------LSPLR--------------------VSTYNGILKMYSECDSMDDAF 465
L L V ++N IL Y + +D A
Sbjct: 329 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 388
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M ++ SW M++G+ GL EDA+ +F+Q + +KP D + G +AC LG
Sbjct: 389 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELG 448
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + + S + +++ M G +++A MP V W
Sbjct: 449 ALKHGRQLHAHLVQCGFEASNSAGN--ALLTMYAKCGAVNDARLVFLVMPNLDSVS-WNA 505
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSRLN 614
+++ HG+ LEL D+ + E +DP R++
Sbjct: 506 MISALGQHGHGREALELFDQM--VAEGIDPDRIS 537
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 43/264 (16%)
Query: 366 FAEASRSSQNNGTLE--QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGD 422
F +A ++ + L + + A+ V LL + D +F+ L+ A G
Sbjct: 114 FFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQ 173
Query: 423 AKALEEAKAVHEHVERLLS--PLRVSTYNGILKMYSECDSMD---DAFSVFSNMTERDLT 477
L H L S +S N ++ +Y +CD+ + DA V M ++D
Sbjct: 174 MHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDL 233
Query: 478 SWDTM-------------------------------ITGFAKNGLGEDAVDIFSQFKQAG 506
+W TM I+G+ ++G+ DA ++F +
Sbjct: 234 TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEK 293
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYL 563
+ D+ F V SAC+ G V G +H + + VP V ++V + G +
Sbjct: 294 VPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKI 353
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
A + M ++ DV W +++
Sbjct: 354 VIAKRIFDTMNLK-DVVSWNTILS 376
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 228/374 (60%), Gaps = 13/374 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++AC A+E + +HEHV + V ++ MY++C + A VF +
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237
Query: 472 TERD---LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
RD + SW+ MITG+A +G +A+D+F + + KPD F+GV SACS G +
Sbjct: 238 LVRDAVLVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLE 296
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG + FE+M +DY I P+++HY +VD+LG +G LDEA I +M + PD VW L+N
Sbjct: 297 EGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNS 356
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLA 639
C++H N+ELG+ E + +L+P N ++AG +L ++ KK
Sbjct: 357 CKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSI 416
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ + +EV++KVH + +GDTSHP +D+IY+ + + MKEAGY P T V HD++ + K
Sbjct: 417 ACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKA 476
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
+ +HSERLA++ GL+S+P + I KNLR+C DCH A+K ISKI RE+ +RD R+
Sbjct: 477 NMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRY 536
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG+CSC DYW
Sbjct: 537 HHFKDGVCSCGDYW 550
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
E C++ ++ L+Q+C KA++ K +H V ++ +Y CDS+
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A +F + + ++ W+ +I G+A NG E AV ++ Q GL PD+ F V AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+AL + G E + + G + +++DM G + A E +K+ + V V
Sbjct: 187 AALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLV 245
Query: 582 --WEKLMNLCRMHGN 594
W ++ MHG+
Sbjct: 246 VSWNAMITGYAMHGH 260
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ ++ G+ +E + +L ++++ + TF+ L+ A AL +H VE+L
Sbjct: 300 MTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGI 359
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
RV N ++ MYS+C +D ++ VF +M RD+ +W+ MI G++++GLG+ A+ +F
Sbjct: 360 KNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQD 419
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AG P+ F+GV SAC+ L V EG + + K + + P ++HY +V +L G
Sbjct: 420 MLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAG 479
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L+EA F+ ++ DV W L+N C +H N LG + AE + Q+DP S
Sbjct: 480 MLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSN 539
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ K+++ ++ +E+ KK + +E+R+ VH + + ++HPE +IY ++
Sbjct: 540 MYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQL 599
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +K+ GY+P VLHD++ E KE L HSE+LA+++GL+ P+ APIR++KNLR+
Sbjct: 600 LLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRI 659
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K+ISK+ R +I+RDA RFHHF+DG C+C D+W
Sbjct: 660 CEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L+ LV+ G++ EA+EVLG + + + D T+ +M CG + L VH + +
Sbjct: 199 LNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGL 258
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ M+ +C + A VF + R++ W +++T + +NG E+ +++ S
Sbjct: 259 TFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSC 318
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G ++ F + +A + + + G +LH + + GI + ++++M
Sbjct: 319 MDREGTMSNEFTFAVLLNAFAGMAALRHGDLLH--ARVEKLGIKNRVIVGNALINMYSKC 376
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D + + M D+ W ++
Sbjct: 377 GCIDSSYDVFFDMR-NRDIITWNAMI 401
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y +C + A +F M+ R + S++ ++ G+ +G + V +F + +
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEA 566
P++ +F V SAC+ G V EGM + K +G+V H+V S+V M ++D A
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFK-FGLV--FHHFVKSSLVHMYSKCFHVDLA 175
Query: 567 LEFIE 571
L+ +E
Sbjct: 176 LQVLE 180
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 229/391 (58%), Gaps = 10/391 (2%)
Query: 393 EAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
EA+EV G++ + + T S ++ AC A AL K +H+ V ++ V I
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 1394
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C ++ A F M E+++ SW M+ G+ +G ++A+DIF + +AG+KP+
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 1454
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V +ACS G V EG F +M Y I P ++HY +VD+ G G L+EA I+
Sbjct: 1455 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 1514
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE--- 628
+M M+PD VW L+ CR+H N++LG+ A+ + +LDP + +A
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574
Query: 629 ------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
L K ++ K +L+E++ +VH + GD HP + IY + L ++++ GY
Sbjct: 1575 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 1634
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P VLHD+D+E KE L HSE+LAV+ G+++S I I+KNLRVCGDCH+ +K+
Sbjct: 1635 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 1694
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+V R+ ++RD+KRFHHFKDG+CSC DYW
Sbjct: 1695 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 120/228 (52%), Gaps = 6/228 (2%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASR------SSQNNGTLEQLDGLVKEGKVKEAIEVLGL 400
++N + + V++ D EA R S ++G ++ + +EA+E+
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKR 247
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
++ + I + T L++AC + L + +H++ + + V ++ MYS+C S
Sbjct: 248 MQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGS 307
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ DA VF M + L +W++MIT +GLG++A+++FS+ ++ +KPD FIGV A
Sbjct: 308 IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCA 367
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
C + +V EG +F M++ YGI P +HY + ++ + LDEA +
Sbjct: 368 CVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 48/252 (19%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
Q I+ D TF +++AC + +++ K VH + + V N ++ Y +C
Sbjct: 119 QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 464 AFSVFSNMTERDLTSWDT-------------------------------MITGFAKNGLG 492
A VF M R++ SW T MI G+ +N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV 551
E+A+++F + + + P++ + + AC+ +G + G +H DY I ++ V
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIH------DYAIKNCIEIGV 292
Query: 552 ----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
+++DM G + +A+E E MP + + W ++ +HG LG + +
Sbjct: 293 YLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHG---LGQEALNLFSE 348
Query: 608 LDPSRLNEKSKA 619
++ R+N K A
Sbjct: 349 ME--RVNVKPDA 358
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ L K + +F +++C L + H+
Sbjct: 1117 LARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETD 1176
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MYS+C + DA ++F + R++ SW +MITG+ +N ++A+ +F F +
Sbjct: 1177 LFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLE 1236
Query: 505 A--------GLKPDDQIFIGVFSACS 522
+ D + + V SACS
Sbjct: 1237 EETEVEDGNNVPLDSVVMVSVLSACS 1262
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ +D ++ AC + VH V + + N ++ Y++C +
Sbjct: 1247 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 1306
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSAL 524
VF M E+D SW++MI +A++GL +A+++F + G++ + V AC+
Sbjct: 1307 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 1366
Query: 525 GDVVEG-MLHFESMSKD--YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
G + G +H + + D Y + SI+DM G ++ A + ++M E +V
Sbjct: 1367 GALRAGKCIHDQVIKMDLEYNVCVG----TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKS 1421
Query: 582 WEKLMNLCRMHG 593
W ++ MHG
Sbjct: 1422 WTAMVAGYGMHG 1433
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFES 536
SW+++I A+ G +A+ FS ++ GL P F +CSAL D+V G M H ++
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G + +++DM G L +A +++P+ +V W ++
Sbjct: 1169 FV--FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMIT 1216
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 241/409 (58%), Gaps = 22/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--- 437
+DG + G+ EA+ + + + + D + A E + +H +V+
Sbjct: 233 MIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR 292
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
R+ RV T ++ MY +C S++DA SVF+++ ++D+ W+ MI G+A +G A++
Sbjct: 293 RVQLNARVGT--ALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALE 350
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+FSQ + GL P D FIG+ +ACS G V EG F+SM ++Y IVP ++HY +VD+L
Sbjct: 351 MFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLL 410
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRL-- 613
G G ++EA ++ M + PD +W L+ CR+H N+ LG + A+ + L S +
Sbjct: 411 GRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYI 470
Query: 614 ---NEKSKAGLVPVNASELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETD 664
N + G N E+A+ + K + + +EV KV+E+ AGD SHP TD
Sbjct: 471 LLSNIYAAVG----NWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTD 526
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IYA++ + +KE G++P+T VLHD+D+ KE+AL HSE+LAV+ GL+S+ I
Sbjct: 527 EIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETI 586
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+I+KNLR C DCH+ LK+ISKI GR+++ RD RFHHF DG C+C DYW
Sbjct: 587 KIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V +L Y++ ++DDA +F M +D W+ MI G+ ++G +A+ +F +
Sbjct: 196 VVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR 255
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+G+ PD+ I SA + LG G + + + + +++DM G L+
Sbjct: 256 SGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLE 315
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+A+ + + D+ VW ++N MHG+
Sbjct: 316 DAVSVFNSIG-DKDIVVWNAMINGYAMHGD 344
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 241/409 (58%), Gaps = 22/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--- 437
+DG + G+ EA+ + + + + D + A E + +H +V+
Sbjct: 232 MIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSR 291
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
R+ RV T ++ MY +C S++DA SVF+++ ++D+ W+ MI G+A +G A++
Sbjct: 292 RVQLNARVGT--ALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALE 349
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+FSQ + GL P D FIG+ +ACS G V EG F+SM ++Y IVP ++HY +VD+L
Sbjct: 350 MFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLL 409
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRL-- 613
G G ++EA ++ M + PD +W L+ CR+H N+ LG + A+ + L S +
Sbjct: 410 GRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYI 469
Query: 614 ---NEKSKAGLVPVNASELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETD 664
N + G N E+A+ + K + + +EV KV+E+ AGD SHP TD
Sbjct: 470 LLSNIYAAVG----NWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTD 525
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IYA++ + +KE G++P+T VLHD+D+ KE+AL HSE+LAV+ GL+S+ I
Sbjct: 526 EIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETI 585
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+I+KNLR C DCH+ LK+ISKI GR+++ RD RFHHF DG C+C DYW
Sbjct: 586 KIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V +L Y++ ++DDA +F M +D W+ MI G+ ++G +A+ +F +
Sbjct: 195 VVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLR 254
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+G+ PD+ I SA + LG G + + + + +++DM G L+
Sbjct: 255 SGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLE 314
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+A+ + + D+ VW ++N MHG+
Sbjct: 315 DAVSVFNSIG-DKDIVVWNAMINGYAMHGD 343
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 228/373 (61%), Gaps = 14/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ + VH H+ + L N IL MY++ SM DA VF +
Sbjct: 266 TYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRV 325
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RDL +W+TM+T FA+ GLG++AV F + ++ G++ + F+ V +ACS G V EG
Sbjct: 326 DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGK 385
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M KDY + P + HYVS VD+LG G L EAL F+ KMPMEP VW L+ CRM
Sbjct: 386 QYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRM 444
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N ++G A+ V +LDP + L + AS ++ K KK +
Sbjct: 445 HKNAKIGQYAADHVFELDPE--DTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPA 502
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ + VH + A D++HP++++IY + + ++K+AGY+P T +VL I ++ +E
Sbjct: 503 CSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERET 562
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE++A++ L++ PA A IRIMKN+R+CGDCHSA + +S++ RE+++RD RFH
Sbjct: 563 KLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFH 622
Query: 761 HFKDGLCSCRDYW 773
HF +G CSC DYW
Sbjct: 623 HFSNGSCSCGDYW 635
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ ++ AC +K L A+A+H H+ R N ++ MY +C ++ DA VF +
Sbjct: 64 VYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGI 123
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
RD+ SW +ITG+A+N + +A+ + +A +P F A A G
Sbjct: 124 PTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG 177
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 9/203 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LGLL + P TF+ ++A G + +H + V + +L
Sbjct: 146 EALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALL 205
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C MD A VF + ++ SW+ +I GFA+ G GE + F++ ++ G
Sbjct: 206 DMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHF 265
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFI 570
+ VFSA + +G + +G M K + +V +I+ M +G + +A +
Sbjct: 266 TYSSVFSALARIGALEQGRWVHAHMIKS---GQKLTAFVANTILGMYAKSGSMVDARKVF 322
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+++ + D+ W ++ +G
Sbjct: 323 DRVD-QRDLVTWNTMLTAFAQYG 344
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/401 (39%), Positives = 235/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ GK +EA V ++ + D+ T L+ AC AL+ + H V
Sbjct: 379 LSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGL 438
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L S N ++ MY++C +D + VF M RD+ SW+TMI G+ +GLG++A +F
Sbjct: 439 ALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLS 498
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G +PDD FI + +ACS G V EG F++M+ YGI+P M+HY+ +VD+L G
Sbjct: 499 MKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGG 558
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+LDEA +FI+ MP++ DV VW L+ CR+H N++LG + + ++++L P N
Sbjct: 559 FLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSN 618
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG + K K KK + +E+ +H + GD SHP + IY +
Sbjct: 619 IFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDN 678
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K+ GY +T FVL D+++E KE+ALL HSE+LA++ G+LS I + KNLRV
Sbjct: 679 ILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRV 738
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K ++ + R +I+RDA RFHHFK+G CSC D+W
Sbjct: 739 CGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 382 LDGLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V ++ EA + L+E C + + + ++ C L +H + +
Sbjct: 277 IGGFVLCDRMTEAFNLFKDMLVEGMCF-LSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
++ N +L MY++ +++A +F + +D S+ +++G+ +NG E+A +F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + ++PD + + ACS L + G H + + + S+ + S++DM
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICN--SLIDMYA 453
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + +KMP D+ W ++ +HG
Sbjct: 454 KCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG 487
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF +++AC L + +H H L + L VST ++ +Y C A +VF+
Sbjct: 101 TFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVST--ALIDLYIRCARFGPAANVFA 158
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAV-DIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M RD+ +W+ M+ G+A +G+ A+ + + GL+P+ + + + G +
Sbjct: 159 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218
Query: 529 EG 530
+G
Sbjct: 219 QG 220
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 6/204 (2%)
Query: 381 QLDGLVKEGKVKEAI-EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
L G G AI +L + ++ + + T L+ AL + +VH + R
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRA 230
Query: 440 L---SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
+ +V +L MY++C + A VF MT R+ +W +I GF +A
Sbjct: 231 YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAF 290
Query: 497 DIFSQFKQAGLKPDDQIFIG-VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
++F G+ + C++L D+ G ++ GI + S++
Sbjct: 291 NLFKDMLVEGMCFLSATSVASALRVCASLADLRMGT-QLHALLAKSGIHADLTAGNSLLS 349
Query: 556 MLGSTGYLDEALEFIEKMPMEPDV 579
M G ++EA +++ ++ +
Sbjct: 350 MYAKAGLINEATMLFDEIAIKDTI 373
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF + D +++ +I ++ G A+D++ + P+ F V ACSAL D
Sbjct: 55 VFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALAD 114
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + + G+ + +++D+ A KMPM DV W ++
Sbjct: 115 LCAGRT-IHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR-DVVAWNAML 172
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 241/408 (59%), Gaps = 21/408 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDL----PTFSQLMQACGDAKALEEAKAVHEHV 436
+DG + G E + LL +Q ++ + T ++ ACG ALE + VH ++
Sbjct: 43 MIDGYAQHGLPNEGL----LLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYI 98
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
E + V ++ MYS+C S++DA VF ++ +D+ +W++M+ G+A +G +DA+
Sbjct: 99 ENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDAL 158
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F + G +P D FIGV +ACS G V EG F SM +YGI P ++HY +V++
Sbjct: 159 RLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNL 218
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG GYL+EA E ++ M ++ D +W L+ CR+HGN+ LG++ AE + + + N
Sbjct: 219 LGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYL--VSQNLANSG 276
Query: 617 SKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L + A+ L KE +K + +EV +KVHE+ AGD HP++ +
Sbjct: 277 TYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSRE 336
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY ++ + +K GY P+T VLHD++ KE +L HSE+LA++ GL+++ I+
Sbjct: 337 IYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIK 396
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLRVC DCH+ K+ISKI GR++++RD RFHHF +GLCSC DYW
Sbjct: 397 IVKNLRVCADCHAVTKLISKITGRKVVMRDRNRFHHFVNGLCSCGDYW 444
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ Y++ +D+A +F + ERD W+ MI G+A++GL + + +F Q
Sbjct: 6 LVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLN 65
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A ++P++ + V SAC G + G S ++ GI +++ S++DM G L+
Sbjct: 66 AKVRPNEVTVLAVLSACGQTGALETGRW-VHSYIENNGIGINVRVGTSLIDMYSKCGSLE 124
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A E++ DV W ++ MHG
Sbjct: 125 DARLVFERIS-NKDVVAWNSMVVGYAMHG 152
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 235/392 (59%), Gaps = 14/392 (3%)
Query: 396 EVLGLLEKQCIS-----VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
E LGL K I + T S ++ AC A A++ K +H V R+ V
Sbjct: 277 EALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTS 336
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MYS+C ++ A+ F + +++ SW MI G+ +G G++A+ +F+ +++GLKP+
Sbjct: 337 VVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPN 396
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
FI V +ACS G + EG + +M ++GI P ++HY +VD+LG G LDEA I
Sbjct: 397 YITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLI 456
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP 623
++M ++PD +W L++ CR++ N+EL CAE + +LD + N ++AG+
Sbjct: 457 KEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWK 516
Query: 624 V--NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
L K + +K + +E++ K H + GD SHP+ +IYA + L ++ +AG
Sbjct: 517 EVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAG 576
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P T VLHD+D E +E L HSE+LAV+ L++S + I ++KNLRVC DCH+A+K
Sbjct: 577 YVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIK 636
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
II+K+ GRE+IIRD KRFHHFKDGLCSC DYW
Sbjct: 637 IITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG--LKPDDQIFIGVFSACSALGDV 527
+M +RD+ SW+TMI +A+NGL +A+ ++S+ G ++ + V AC+ G +
Sbjct: 253 DMMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAI 312
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + G+ ++ S+VDM G ++ A + +K+ + ++ W ++
Sbjct: 313 QTGK-RIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGK-NILSWSAMIA 370
Query: 588 LCRMHG 593
MHG
Sbjct: 371 GYGMHG 376
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 247/402 (61%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L V K ++A+ V G + K + TFS ++AC +AL++ K +H +L
Sbjct: 275 LTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGL 334
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY+EC +++ A +VF N+ E+D+ SW+++I G A++G G A+ F+Q
Sbjct: 335 ETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQ 394
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+ P++ F G+ SACS G +++G FE +S+ V +HY +VD+LG G
Sbjct: 395 MIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCG 454
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
LDEA E + MP++ + +W L++ CR+H NLE+ +R A+ + L+P+ N
Sbjct: 455 KLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSN 514
Query: 615 EKSKAGLVPVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ AG + S + + + L Q + + +R K HE+ + D SHP +++IY +
Sbjct: 515 IYASAGRWA-DVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLD 573
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++KE GY+P+ +F LHD++ E KEE L HSERLA++ GL+S+ + I +MKNLR
Sbjct: 574 WLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLR 633
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCHS +K++SKIVGR++++RD+ RFHHFK+G+CSC DYW
Sbjct: 634 VCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL GK +EA+ V + + + TF+ ++ AC +A VH HV +L
Sbjct: 173 MIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLG 232
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ Y+ C ++ A +F+ +++ W ++T + N +DA+ +F
Sbjct: 233 CFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFG 292
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G P+ F AC L + +G +M+ G+ + S+V M
Sbjct: 293 DMTKMGALPNQSTFSITLKACCGLEALDKGK-EIHTMAIKLGLETDVFVGNSLVVMYTEC 351
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A+ + E D+ W ++ HG
Sbjct: 352 GNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHG 383
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ +N ++ Y E +++ +F M RD+ SW +MI G NG E+A+ +F + +
Sbjct: 136 VAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLR 195
Query: 505 AGLKPDDQIFIGVFSACS 522
+G++P F V SAC+
Sbjct: 196 SGVEPTWSTFACVLSACA 213
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N ++K +C ++ A +F M E+++ SW TM+ G+ K G E A +F
Sbjct: 74 VVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHV 133
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+ + + G F G V EG+ FE M V + + S++ L G +
Sbjct: 134 KDVAAWNAMVHGYFEN----GRVEEGVRLFEEMP-----VRDVISWTSMIGGLDLNGKSE 184
Query: 565 EALEFIEKMP---MEPDVDVWEKLMNLC 589
EAL +KM +EP + +++ C
Sbjct: 185 EALFVFKKMLRSGVEPTWSTFACVLSAC 212
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/406 (39%), Positives = 239/406 (58%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ + G+ EA ++ ++ + D F ++ AC A ALE K +H H L
Sbjct: 302 MIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHA--LD 359
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S L V G ++ MYS+ S+DDA VF M R++ SW+ MI+G A++GLG+DA+++
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEV 419
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+KPD F+ V SACS G V EG + +M++ YGI P + H +VD+LG
Sbjct: 420 FRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLG 479
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L EA FI+ M ++PD W L+ CR +GN+ELG+ A+ +LDP N +
Sbjct: 480 RAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPK--NAATY 537
Query: 619 AGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A + +E+ +K ++ +EV +K+H++ D+SHPE +I
Sbjct: 538 VLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEIN 597
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ ++K GYIP+TR VL + + + KE + +HSE+LA+ +GL+ +P PIR+
Sbjct: 598 ESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVF 657
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH A K+ISK+ GRE+I+RDA RFHHFKDG+CSC DYW
Sbjct: 658 KNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G KEA ++ +E++ + T+ ++ AC AL+ K VH H L V
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+++MY++ S+DDA VF M RD+ SW+ MI FA++G G +A D+F Q + G
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
KPD +F+ + +AC++ G +E + + D G+ ++ ++V M +G +D+A
Sbjct: 327 CKPDAIMFLSILNACASAG-ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDA 385
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL-----DPSR------LNE 615
++M + +V W +++ HG LG E+ ++ P R L+
Sbjct: 386 RVVFDRMKVR-NVVSWNAMISGLAQHG---LGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441
Query: 616 KSKAGLV 622
S AGLV
Sbjct: 442 CSHAGLV 448
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 47/292 (16%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEA---------SRSSQNNGTLEQL------------- 382
G I + M +VL C + D A SR QN + L
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 383 ----DGLVKE----------GKV--KEAIEVLGLLEKQC---ISVDLPTFSQLMQACGDA 423
D LVK+ G V K A + + L + C + + T+ +++AC
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 424 KALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL+ K VH + L S +RV T +L+MY +C S+++A +F N+ D+ SW
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGT--ALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI +A++G G++A + Q +Q G KP+ ++ + +AC++ G ++ + + D
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG-ALKWVKRVHRHALDA 259
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G+ ++ ++V M +G +D+A ++M + DV W ++ HG
Sbjct: 260 GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHG 310
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 2/204 (0%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+ EAI VL ++ + D + ++++ C K L AK VH+ + + N
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L +Y EC + +A VF + ++ SW+ MI G+ ++ EDA+ +F + G++P+
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
++ + AC++L + G + + G+ ++ +++ M G G ++EA
Sbjct: 129 AGTYMIILKACASLSALKWGK-EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGN 594
+ + M D+ W ++ GN
Sbjct: 188 DNL-MNHDIISWTVMIGAYAQSGN 210
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 241/403 (59%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V++G +E +++ + + + D TF+ L++A +L K +H + +
Sbjct: 384 ISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGF 443
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + + +L +Y++C S+ DA F M +R++ SW+ MI+ +A+NG E + F +
Sbjct: 444 MSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 503
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+GL+PD F+GV SACS G V EG+ HF SM++ Y + P +HY S+VDML +G
Sbjct: 504 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 563
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--------L 613
+EA + + +MP++PD +W ++N CR+H N EL R A+ + ++ R
Sbjct: 564 RFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 623
Query: 614 NEKSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + AG N S++ K + KKL + + +E++ + H + A D HP+ ++I I
Sbjct: 624 NIYAAAGQWE-NVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKI 682
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L M+E GY P+T LH+ D++ K E+L HSERLA++ L+S+P +PI +MKNL
Sbjct: 683 DMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNL 742
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R C DCH+A+K+ISKIVGRE+ +RD+ RFHHF+DG CSC D+W
Sbjct: 743 RACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +GK K A ++ L+ F+ ++ + E + +H +
Sbjct: 283 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 342
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY++C ++A +F+N+T R W MI+ + + G E+ + +F++
Sbjct: 343 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 402
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+QA + D F + A +++ + G S G + ++ +++D+ G
Sbjct: 403 MRQASVIADQATFASLLRASASIASLSLGK-QLHSFIIKSGFMSNVFSGSALLDVYAKCG 461
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ +A++ ++MP + ++ W +++ +G E
Sbjct: 462 SIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAE 495
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L K+ +D TF+ ++ A + + +H V + V N +L YS+ DS
Sbjct: 201 LFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDS 260
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ DA +F M E+D S++ +I+G+A +G + A D+F + + F + S
Sbjct: 261 VIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSI 320
Query: 521 CSALGDVVEG-MLHFESM--SKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
S D G +H +++ + D I+ S+VDM G +EA
Sbjct: 321 ASNTLDWEMGRQIHAQTIVTTADSEILVGN----SLVDMYAKCGKFEEA 365
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VST N ++ Y + ++ +A +F M ER +W +I G+++ ++A ++F Q ++
Sbjct: 79 VST-NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR 137
Query: 505 AGLKPDDQIFIGVFSACSA--LGD-VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G +PD F+ + S C+ +G+ + + + D ++ ++VD +
Sbjct: 138 CGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN----TLVDSYCKSN 193
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
LD A + ++M P++D + LC N+ L D
Sbjct: 194 RLDLACQLFKEM---PEIDSFTFAAVLC---ANIGLDD 225
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 229/381 (60%), Gaps = 17/381 (4%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDD 463
I D ++ AC AL++ K VH ++ + + L+V+ G +L MY +C +++
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRK--NGLKVNVILGTTLLDMYMKCGCVEN 489
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A VF+ M E+ ++SW+ +I G A NGL E ++D+FS+ K G+ P++ F+GV AC
Sbjct: 490 ALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRH 549
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+G V EG HF SM + +GI P++KHY +VD+LG G L+EA + IE MPM PDV W
Sbjct: 550 MGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWG 609
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKE 632
L+ C+ HG+ E+G+R + +L P ++ L + AS+ + K+
Sbjct: 610 ALLGACKKHGDTEMGERVGRKLIELQPD--HDGFHVLLSNIFASKGDWEDVLEVRGMMKQ 667
Query: 633 KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHD 692
+ K +L+E VHE+ AGD +HP +K+ ++ + ++K GY P+T V D
Sbjct: 668 QGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLD 727
Query: 693 IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELI 752
ID+E KE L HSE+LA++ GLL+ PIRIMKNLR+C DCH+A K+ISK RE++
Sbjct: 728 IDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIV 787
Query: 753 IRDAKRFHHFKDGLCSCRDYW 773
+RD RFH+FK+G CSC DYW
Sbjct: 788 VRDRHRFHYFKEGACSCMDYW 808
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 426 LEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
+EEAK + + + P R + N ++ + + + +A+ +F+ M E+D+ SW +I+
Sbjct: 223 VEEAKLIFDQM-----PQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALIS 277
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH 533
G+ +NG+ E+A+ +F + G++ D+ + + V SAC+ L V G M+H
Sbjct: 278 GYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIH 327
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 38/303 (12%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDG 384
++++ + Q P S S + G M QV+ K ++ E S + + G
Sbjct: 224 EEAKLIFDQMPQRNIVASNSMIVLLGKMG-QVMEAWKLFNEMDEKDMVSWS----ALISG 278
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
+ G +EA+ + + + +D ++ AC ++ K +H V R+
Sbjct: 279 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA--------- 495
V+ N ++ MYS + DA +F+ D SW++MI+G K G E A
Sbjct: 339 VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPE 398
Query: 496 ----------------------VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
+ +F + + ++PD+ I + V SAC+ L + +G
Sbjct: 399 KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWV 458
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ K+ G+ ++ +++DM G ++ ALE M E V W L+ ++G
Sbjct: 459 HAYIRKN-GLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALIIGLAVNG 516
Query: 594 NLE 596
+E
Sbjct: 517 LVE 519
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 371 RSSQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE- 427
R +NG + + ++ ++A+ + L+ K + D T+ ++QAC + LE
Sbjct: 100 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEF 158
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
K +H+HV ++ V N ++ MY+ C +M DA +F D SW++++ G+
Sbjct: 159 GGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYV 218
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
K G E+A IF Q Q + + + + +G V+E F M + M
Sbjct: 219 KKGDVEEAKLIFDQMPQRNIVASNSMIV----LLGKMGQVMEAWKLFNEMDEK-----DM 269
Query: 548 KHYVSIVDMLGSTGYLDEAL-EFIE 571
+ +++ G +EAL FIE
Sbjct: 270 VSWSALISGYEQNGMYEEALVMFIE 294
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 243/395 (61%), Gaps = 14/395 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+ + A+ +L ++++ T+S ++ AC ALE+ K VH H+ + S
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK--S 319
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L++ + N +L MY++ S+DDA VF + + D+ SW+TM+TG A++GLG++ +D F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + G++P++ F+ V +ACS G + EG+ +FE M K Y + P + HYV+ VD+LG
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGR 438
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----SRL-- 613
G LD A FI +MP+EP VW L+ CRMH N+ELG AE +LDP R+
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498
Query: 614 -NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + AG ++ KE KK + + +E+ + VH + A D +HP +I
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKW 558
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++KE GY+P+T VL +DQ+ +EE L HSE+LA++ LL++P +PIRI KN+
Sbjct: 559 EEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNI 618
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
RVCGDCH+A+K +SK+V RE+I+RD RFH F+DG
Sbjct: 619 RVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S L++A G L+ +H + V + ++ MY+ C MD A F M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
+ SW+ +I+G A+ G GE A+ + + ++ +P + V SAC+++G + +G
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + ++ + + +++DM G +D+A +++ ++PDV W ++ C
Sbjct: 311 WVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCA 367
Query: 591 MHGNLELGDRCAEIVEQL 608
HG LG + EQ+
Sbjct: 368 QHG---LGKETLDRFEQM 382
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 3/191 (1%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYS 456
L L+++ + D +S+L++ C +E+ + VH H V+ + N I+ MY+
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C +DDA +F M +D+ +W +I GF++N DA+ +F Q + G +P+
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
+ A + + G + YG S+ ++VDM G++D A + MP +
Sbjct: 195 LLKASGSEHGLDPGT-QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 577 PDVDVWEKLMN 587
+V W L++
Sbjct: 254 SEVS-WNALIS 263
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 256/437 (58%), Gaps = 12/437 (2%)
Query: 346 NIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
I +G + S L+N F E S+ + + + G V G ++A+++ + +
Sbjct: 371 TILSGYIESGCLDNAARI--FKEMPYKSELSWMV-MVSGYVHGGLAEDALKLFNQMRSED 427
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ T++ + ACG+ AL+ K +H H+ + S N +L MY+ C ++ DA
Sbjct: 428 VKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDAR 487
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M D SW+ MI+ ++G G +A+++F Q G+ PD F+ + +AC+ G
Sbjct: 488 LVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAG 547
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V +G +FESM +D+GI P HY ++D+LG G + EA + I+ MP EP +WE +
Sbjct: 548 LVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAI 607
Query: 586 MNLCRMHGNLELG----DRCAEIVEQLDPSRL---NEKSKAG--LVPVNASELAKEKENK 636
++ CR++G++ELG D+ ++V + D + + N S AG + +L +++ K
Sbjct: 608 LSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 667
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +EV +KVH + GDT HP+ ++Y + + A+M++ GY+P+T+F L D+
Sbjct: 668 KEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPH 727
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE L AHSERLAVS GLL PA A + ++KNL++CGDCH+A+ +S+ VGRE+++RD
Sbjct: 728 EKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDV 787
Query: 757 KRFHHFKDGLCSCRDYW 773
+RFHHFKDG CSC +YW
Sbjct: 788 RRFHHFKDGECSCGNYW 804
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 45/274 (16%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V+ G EA E+ + + I D TF+ L+ AC +A K+VH RL
Sbjct: 267 MISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQ 326
Query: 440 ----------------------------------LSPLRVSTYNGILKMYSECDSMDDAF 465
++ V ++N IL Y E +D+A
Sbjct: 327 PDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAA 386
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M + SW M++G+ GL EDA+ +F+Q + +KP D + G +AC LG
Sbjct: 387 RIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELG 446
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + + S + +++ M G + +A MP V W
Sbjct: 447 ALKHGKQLHAHLVQCGFEASNSAGN--ALLTMYARCGAVKDARLVFLVMPNVDSVS-WNA 503
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSRLN 614
+++ HG+ LEL D+ + + + P R++
Sbjct: 504 MISALGQHGHGREALELFDQ--MVAQGIYPDRIS 535
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 47/238 (19%)
Query: 412 TFSQLMQACGDAK--ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS---MDDAFS 466
+F+ L+ A G A+ +H V +L + +S N ++ +Y +CD+ DA
Sbjct: 161 SFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARK 220
Query: 467 VFSNMTERDLTSWDT-------------------------------MITGFAKNGLGEDA 495
V M E+D +W T MI+G+ ++G+ +A
Sbjct: 221 VLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEA 280
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--S 552
++F + + PD+ F + SAC+ G + G +H + + VP V +
Sbjct: 281 FELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNA 340
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG--DRCAEIVEQL 608
+V + +G + A + + M ++ DV W +++ G +E G D A I +++
Sbjct: 341 LVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTILS-----GYIESGCLDNAARIFKEM 392
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 229/373 (61%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ +++AC + VH + + + + +L+MYS+C M A VF M
Sbjct: 271 TYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAM 330
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ DL SW +I+G+A+NG E+A+ F F ++G+KPD F+GV SAC+ G V +G+
Sbjct: 331 AKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F S+ + Y I + HY ++D+L +G + A + I M ++P+ +W L+ CR+
Sbjct: 391 EIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRI 450
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N+ L R AE + +++P N + L + AS + + K K+ +
Sbjct: 451 HKNVGLARRAAEALFEIEPE--NPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPA 508
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +EV +VH + GD SHP+ D+IYAL++ L +M E GY+ + FVLHD++ E KE+
Sbjct: 509 SSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQ 568
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+ HSERLAV+ G++++P +PI++ KNLR+CGDCH+A+K+IS+IV R++I+RD+ RFH
Sbjct: 569 DIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFH 628
Query: 761 HFKDGLCSCRDYW 773
HFKDG+CSCRDYW
Sbjct: 629 HFKDGICSCRDYW 641
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 243/430 (56%), Gaps = 19/430 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A V N DD A S + G V G +A+ + + + + D T
Sbjct: 446 AGIVFNYISAPDDVAWTS----------MISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ L++A ALE+ + +H +V +L ++ MY++C +++DA+ +F M
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ W+ M+ G A++G E+AV++F K G++PD FIG+ SACS G E
Sbjct: 556 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 615
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+ SM DYGI P ++HY +VD LG G + EA + IE MP + + L+ CR+
Sbjct: 616 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 675
Query: 593 GNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNL 643
G++E G R A + L+P S + + +A ++ K K KK +
Sbjct: 676 GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 735
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
++V++ +H + D SHP+ D IY + + ++E GY+P+T FVL D++ E KE +L
Sbjct: 736 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 795
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE+LA+++GL+S+PA IR++KNLRVCGDCH+A+K ISK+ RE+++RDA RFHHF+
Sbjct: 796 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 855
Query: 764 DGLCSCRDYW 773
DG+CSC DYW
Sbjct: 856 DGVCSCGDYW 865
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 21/251 (8%)
Query: 353 ASQVLNNCKHED------DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCI 406
A +V N+ KH D + ++SS ++ L+ EG L+
Sbjct: 340 AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG-----------LKPDHF 388
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
++ T + +ACG L++ K +H H + + +GIL MY +C M +A
Sbjct: 389 TLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 448
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF+ ++ D +W +MI+G NG + A+ I+ + +Q+ + PD+ F + A S +
Sbjct: 449 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 508
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ +G LH + D P + S+VDM G +++A +KM + ++ +W +
Sbjct: 509 LEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAM 565
Query: 586 MNLCRMHGNLE 596
+ HGN E
Sbjct: 566 LVGLAQHGNAE 576
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+G +E + + LL S T + +++ C ++ L A+ VH + ++ V
Sbjct: 161 DGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFV 220
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ +YS+C M DA +F M ERD+ W+ M+ G+ + GL ++A +FS+F ++GL
Sbjct: 221 SGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 280
Query: 508 KPDDQIFIGVFSAC-------SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+PD+ + + C LG V G+ + D + S+ V+M
Sbjct: 281 RPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSL------VNMYSKM 334
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G A E M D+ W +++ C
Sbjct: 335 GCAYFAREVFNDMK-HLDLISWNSMISSC 362
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 16/263 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA--LEEAKAVHEHVER 438
L G V+ G KEA ++ + + D + ++ C A LE K VH +
Sbjct: 255 MLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVK 314
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
VS N ++ MYS+ A VF++M DL SW++MI+ A++ L E++V++
Sbjct: 315 SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNL 374
Query: 499 FSQFKQAGLKPDDQIF--IGVFSACSALGDVVE----GMLHFESMSKDYGIVPSMKHYVS 552
F GLKPD I + +A A G +V +H ++ G +
Sbjct: 375 FIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKA--GFDSDLHVNSG 432
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
I+DM G + A + PD W +++ C +GN D+ I ++ SR
Sbjct: 433 ILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGN---EDQALRIYHRMRQSR 488
Query: 613 L--NEKSKAGLVPVNASELAKEK 633
+ +E + A L+ ++ A E+
Sbjct: 489 VMPDEYTFATLIKASSCVTALEQ 511
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
N +L MYS+C S+ A VF ERDL +W+ ++ +A +
Sbjct: 116 NNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAAS 156
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 241/403 (59%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V++G +E +++ + + + D TF+ L++A +L K +H + +
Sbjct: 424 ISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGF 483
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + + +L +Y++C S+ DA F M +R++ SW+ MI+ +A+NG E + F +
Sbjct: 484 MSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 543
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+GL+PD F+GV SACS G V EG+ HF SM++ Y + P +HY S+VDML +G
Sbjct: 544 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 603
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--------L 613
+EA + + +MP++PD +W ++N CR+H N EL R A+ + ++ R
Sbjct: 604 RFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMS 663
Query: 614 NEKSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + AG N S++ K + KKL + + +E++ + H + A D HP+ ++I I
Sbjct: 664 NIYAAAGQWE-NVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKI 722
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L M+E GY P+T LH+ D++ K E+L HSERLA++ L+S+P +PI +MKNL
Sbjct: 723 DMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNL 782
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R C DCH+A+K+ISKIVGRE+ +RD+ RFHHF+DG CSC D+W
Sbjct: 783 RACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA E+ +++ D TF L+ C + + V + +L R+ N +
Sbjct: 131 KEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTL 190
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y + + +D A +F M E D S++ MITG++K+GL E AV++F + + +GLKP +
Sbjct: 191 VDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTE 250
Query: 512 QIFIGVFSACSALGDVVEG 530
F V A L D+V G
Sbjct: 251 FTFAAVLCANIGLDDIVLG 269
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +GK K A ++ L+ F+ ++ + E + +H +
Sbjct: 323 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 382
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY++C ++A +F+N+T R W MI+ + + G E+ + +F++
Sbjct: 383 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 442
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+QA + D F + A +++ + G S G + ++ +++D+ G
Sbjct: 443 MRQASVIADQATFASLLRASASIASLSLGK-QLHSFIIKSGFMSNVFSGSALLDVYAKCG 501
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ +A++ ++MP + ++ W +++ +G E
Sbjct: 502 SIKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAE 535
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G K+G ++A+ + ++ + TF+ ++ A + + +H V +
Sbjct: 222 ITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF 281
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +L YS+ DS+ DA +F M E+D S++ +I+G+A +G + A D+F +
Sbjct: 282 VWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRE 341
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESM--SKDYGIVPSMKHYVSIVDMLG 558
+ F + S S D G +H +++ + D I+ S+VDM
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGN----SLVDMYA 397
Query: 559 STGYLDEA 566
G +EA
Sbjct: 398 KCGKFEEA 405
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VST N ++ Y + ++ +A +F M ER +W +I G+++ ++A ++F Q ++
Sbjct: 84 VST-NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQR 142
Query: 505 AGLKPDDQIFIGVFSAC 521
G +PD F+ + S C
Sbjct: 143 CGTEPDYVTFVTLLSGC 159
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 241/421 (57%), Gaps = 17/421 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S S N + G + G ++AI + ++ S + T + ++ AC
Sbjct: 378 DESPEKSLPSWN----AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQL 433
Query: 424 KALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL K VH+ V S + VST ++ MY++C S+ +A +F M +++ +W+T
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVST--ALIGMYAKCGSIAEARRLFDFMPKKNEVTWNT 491
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +G G++A+ IFS+ +G+ P F+ V ACS G V EG F SM Y
Sbjct: 492 MISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G PS+KHY +VD+LG G+L AL+FIE MP++P VWE L+ CR+H + L
Sbjct: 552 GFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTV 611
Query: 602 AEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHE 652
+E + +LDP S ++ + + AK+++ K L+E+ H
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ +GD SHP+ I+ + L +M+EAGY PET LHD+++E +E + HSERLA++
Sbjct: 672 FTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GL+++ IRI+KNLRVC DCH+A K+ISKI R +++RDA RFHHFKDG+CSC DY
Sbjct: 732 FGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDY 791
Query: 773 W 773
W
Sbjct: 792 W 792
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LS VST + +YS+ + ++ A +F E+ L SW+ MI+G+ +NGL EDA+ +
Sbjct: 350 FLSHTSVST--ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
F + + + P+ + SAC+ LG + G +H S D+ S+ +++ M
Sbjct: 408 FREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE--SSIYVSTALIGMY 465
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G + EA + MP + +V W +++ +HG+
Sbjct: 466 AKCGSIAEARRLFDFMPKKNEV-TWNTMISGYGLHGH 501
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKP 509
I+KMY + ++DA VF M E+D W+TMI+G+ KN + +++ +F ++ +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D + + A + L ++ GM S++ G + + G + A
Sbjct: 220 DTTTLLDILPAVAELQELRLGM-QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTL 278
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
+ PD+ + +++ +G EL + + L ++L + LVPV+
Sbjct: 279 FREF-RRPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGAKLKSSTLVSLVPVS 332
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 230/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G A+ + +++ I DL T ++ AC AL+ H ++
Sbjct: 385 VSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF 444
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS+C + A VF+ M D+ SW+ MI G+ +GLG +A+ +F
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
GLKPDD FI + S+CS G V+EG L F++MS+D+ IVP M+H + +VD+LG G
Sbjct: 505 LLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAG 564
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+DEA FI MP EPDV +W L++ CR+H N+ELG+ ++ ++ L P N
Sbjct: 565 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSN 624
Query: 615 EKSKAGLVPVNASELAKEKE--NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG A +K+ KK+ + +E+ VH + GD SH + +I +
Sbjct: 625 IYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEE 684
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK GY E FV D+++E KE+ LL HSE+LA++ G+L+ A PI + KNLRV
Sbjct: 685 LLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRV 744
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K ++ I RE+ +RDA RFHHFK+G C+C D+W
Sbjct: 745 CGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 13/219 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V +KEA+E+ ++ K + T +++AC L + +H ++ +L
Sbjct: 282 MIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S L + N +L MY++C +DDA F M +D S+ +++G +NG A+ IF
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ +G+ PD +GV ACS L G G L + D I ++ +
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNAL------I 455
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G + A E +M D+ W ++ +HG
Sbjct: 456 DMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ L++AC +K+L EAK +H+H + S S + + ++Y C+ + A +F +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+ W+ +I +A NG + A+D++ G++P+ + V ACS L + +G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-V 129
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
S +K +G+ + ++VD G L EA M DV W ++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLY 188
Query: 593 GNLELGDRCAEIVEQLDPSRL--NEKSKAGLVP 623
G L D +++ Q+ + N + G++P
Sbjct: 189 G---LCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC A+E+ +H H + V ++ Y++C + +A +FS+M
Sbjct: 111 TYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM 170
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ RD+ +W+ MI G + GL +DAV + Q ++ G+ P+ +GV
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +A++++ ++++ I + T ++ G+AKAL KA+H + R V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGL 507
G+L MY++C + A +F M R+ SW MI G+ + ++A+++F Q + +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAM 308
Query: 508 KPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
P V AC+ L D+ G LH + G V + +++ M G +D+A
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK--LGSVLDILLGNTLLSMYAKCGVIDDA 366
Query: 567 LEFIEKM 573
+ F ++M
Sbjct: 367 IRFFDEM 373
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 232/394 (58%), Gaps = 15/394 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+++ L++KQ + PT ++ C +L K VH + R + V + ++
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDD 511
MY +C + + +F +D+ W+++I+G+A +GLGE+A+ +F + +G KP++
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ SACS G V EG+ +ESM +G+ P HY +VDMLG G +EA+E I+
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE--L 629
M +EPD VW L+ CR H L++ + CA+ + +++P N + L + AS+
Sbjct: 494 SMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE--NSGTYILLSNMYASQGRW 551
Query: 630 AKEKENKKLASQNLL---------EVRSKVHEY-RAGDTSHPETDKIYALIRGLRAQMKE 679
A E +KL L+ EV +KVH + R G SHPE + I ++ L ++E
Sbjct: 552 ADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY P+ + LHD+D+E K +L HSERLAV++ LL PIR+MKNLRVC DCH+A
Sbjct: 612 AGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTA 671
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KIISK+ RE+I+RDA RFHHF++G CSC+DYW
Sbjct: 672 IKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH- 433
N + GL KEG+V EA E+ + ++ + T++ ++ G +++A+ +
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFD 227
Query: 434 -----------------------EHVERL--LSPLR-VSTYNGILKMYSECDSMDDAFSV 467
E E L + P++ V N ++ + + A V
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRV 287
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F +M ER+ SW T+I +NG +A+D+F ++ G++P I + S C++L +
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 528 VEG 530
G
Sbjct: 348 HHG 350
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++NG++ Y + +D+A VF M ER++ SW ++ G+ NG + A +F + +
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY--VSIVDMLGSTGY 562
+ IG +G + K Y ++P + S++ L G
Sbjct: 139 KNKVSWTVMLIGFLQ---------DG--RIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMN 587
+DEA E ++M E V W ++
Sbjct: 188 VDEAREIFDEMS-ERSVITWTTMVT 211
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 426 LEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
++EA+ V + L P R V ++ ++K Y +D A S+F M E++ SW M+
Sbjct: 95 IDEARKVFD-----LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
GF ++G +DA ++ D+ + G V E F+ MS+
Sbjct: 150 GFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSER---- 201
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
S+ + ++V G +D+A + + MP + +V W ++ +G +E + E+
Sbjct: 202 -SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLMGYVQNGRIEDAEELFEV 259
Query: 605 V 605
+
Sbjct: 260 M 260
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 230/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G A+ + +++ I DL T ++ AC AL+ H ++
Sbjct: 385 VSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF 444
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MYS+C + A VF+ M D+ SW+ MI G+ +GLG +A+ +F
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHD 504
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
GLKPDD FI + S+CS G V+EG L F++MS+D+ IVP M+H + +VD+LG G
Sbjct: 505 LLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAG 564
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+DEA FI MP EPDV +W L++ CR+H N+ELG+ ++ ++ L P N
Sbjct: 565 LIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSN 624
Query: 615 EKSKAGLVPVNASELAKEKE--NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG A +K+ KK+ + +E+ VH + GD SH + +I +
Sbjct: 625 IYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEE 684
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK GY E FV D+++E KE+ LL HSE+LA++ G+L+ A PI + KNLRV
Sbjct: 685 LLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRV 744
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K ++ I RE+ +RDA RFHHFK+G C+C D+W
Sbjct: 745 CGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ L++AC +K+L EAK +H+H + S S + + ++Y C+ + A +F +
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+ W+ +I +A NG + A+D++ G++P+ + V ACS L + +G +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG-V 129
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
S +K +G+ + ++VD G L EA M DV W ++ C ++
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLY 188
Query: 593 GNLELGDRCAEIVEQLDPSRL--NEKSKAGLVP 623
G L D +++ Q+ + N + G++P
Sbjct: 189 G---LCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V +KEA+E+ ++ K + T +++AC L + +H ++ +L
Sbjct: 282 MIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + N +L MY++C +DDA F M +D S+ +++G +NG A+ IF
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ +G+ PD +GV ACS L G G L + D I ++ +
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNAL------I 455
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G + A E +M D+ W ++ +HG
Sbjct: 456 DMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG 493
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC A+E+ +H H + V ++ Y++C + +A +FS+M
Sbjct: 111 TYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM 170
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ RD+ +W+ MI G + GL +DAV + Q ++ G+ P+ +GV
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +A++++ ++++ I + T ++ G+AKAL KA+H + R V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGL 507
G+L MY++C + A +F M R+ SW MI G+ + ++A+++F Q + +
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308
Query: 508 KPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
P V AC+ L D+ G LH + G V + +++ M G +D+A
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK--LGXVLDILLGNTLLSMYAKCGVIDDA 366
Query: 567 LEFIEKM 573
+ F + M
Sbjct: 367 IRFFDXM 373
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 226/376 (60%), Gaps = 14/376 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL S L+ AC AL+ + +H ++ L ++ MY++C ++ A VF
Sbjct: 218 DLTVVSALL-ACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVF 276
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+DL +W MI G+A +G + A+ F + K AG+ PD+ IF+ + +ACS G+V
Sbjct: 277 VETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVD 336
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ FESM DY I P+MKHY IVD+LG G LDEAL FI+ MP+ PD +W L
Sbjct: 337 QGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCA 396
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR H N+E+ + AE + QL+P + S L V A+ L K + +K
Sbjct: 397 CRAHKNIEMAELTAEKLLQLEPK--HPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEK 454
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ +EV +VH + AGD +H ++I + + A K+ GY+PET +VLH+I++E
Sbjct: 455 DPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEE 514
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE+AL +HSE+LA++ GL+S+ + IRI+KNLRVCGDCHS +K SK+ RE+I+RD K
Sbjct: 515 KEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIK 574
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFKDG CSC DYW
Sbjct: 575 RFHHFKDGTCSCGDYW 590
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S+D A S+F +L ++ +I G A+N E +V F + ++PD V
Sbjct: 87 SLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLK 146
Query: 520 ACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP---- 574
+ +AL DV G LH M G+ VS+VDM G L L+ ++ P
Sbjct: 147 SVAALVDVGLGRCLHGGVM--KLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNK 204
Query: 575 ---------MEP-DVDVWEKLMNLCRMHGNLELGDR 600
+ P D+ V L+ C G L++G+R
Sbjct: 205 AESILLWNGVRPNDLTVVSALLA-CTKIGALQVGER 239
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 237/406 (58%), Gaps = 18/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLVK+ V EAIE +++ + + T + ++ C AL K +H + + +
Sbjct: 251 IAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA 310
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C +MD VF+ M +DLTSW+T+ITG+A NG +A++ F +
Sbjct: 311 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 370
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G PD FI + S CS G +G FE M DYGI P+++HY +VD+LG G
Sbjct: 371 MICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAG 430
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+ EALE ++ MP +P +W L+N CR+HGN+ L + A+ + +L+P+ N
Sbjct: 431 RIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSN 490
Query: 615 EKSKAGL---VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSH----PETDKIY 667
+ AG+ V V E +++ K A + L+++SK+H + AG ++ E K++
Sbjct: 491 IYANAGMWESVKV-VREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 549
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L M+E GY+P+T VLHD+ +E + + HSERLA L+++ + PIRI
Sbjct: 550 ---KRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRIT 606
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCHS +K +SK+ GR +++RD RFHHFKDG+CSC+DYW
Sbjct: 607 KNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 2/175 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS ++AC D L+ +AVH V + N +L++YSE D+A VF M
Sbjct: 181 FSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMP 240
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ SW+++I G K +A++ F + G+ + C+ + + G
Sbjct: 241 HRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKE 300
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ K P S+VDM G +D M + D+ W L+
Sbjct: 301 IHAVIVKSTA-KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK-DLTSWNTLIT 353
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 243/430 (56%), Gaps = 19/430 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A V N DD A S + G V G +A+ + + + + D T
Sbjct: 84 AGIVFNYISAPDDVAWTS----------MISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 133
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ L++A ALE+ + +H +V +L ++ MY++C +++DA+ +F M
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 193
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ W+ M+ G A++G E+AV++F K G++PD FIG+ SACS G E
Sbjct: 194 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 253
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+ SM DYGI P ++HY +VD LG G + EA + IE MP + + L+ CR+
Sbjct: 254 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 313
Query: 593 GNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNL 643
G++E G R A + L+P S + + +A ++ K K KK +
Sbjct: 314 GDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 373
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
++V++ +H + D SHP+ D IY + + ++E GY+P+T FVL D++ E KE +L
Sbjct: 374 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 433
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE+LA+++GL+S+PA IR++KNLRVCGDCH+A+K ISK+ RE+++RDA RFHHF+
Sbjct: 434 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 493
Query: 764 DGLCSCRDYW 773
DG+CSC DYW
Sbjct: 494 DGVCSCGDYW 503
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 4/206 (1%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+A+E+ L+ K D T + +ACG L++ K +H H + + +GI
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY +C M +A VF+ ++ D +W +MI+G NG + A+ I+ + +Q+ + PD+
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F + A S + + +G LH + D P + S+VDM G +++A
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLF 189
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLE 596
+KM + ++ +W ++ HGN E
Sbjct: 190 KKMNVR-NIALWNAMLVGLAQHGNAE 214
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 233/397 (58%), Gaps = 9/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G EA E L+++ I D T+ L+ ACG AL+ ++ + V
Sbjct: 437 VENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHV 496
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ M ++ S++ A +F M RD+ +W+ MI G++ +G +A+ +F + +
Sbjct: 497 PLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKE 556
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+P+ F+GV SACS G V EG F + + GIVP++K Y +VD+LG G LDE
Sbjct: 557 RFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDE 616
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKSKA 619
A I+ MP++P +W L+ CR+HGNL++ +R AE +DP +L+ A
Sbjct: 617 AELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAA 676
Query: 620 GLVPVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ N +++ K E++ + + +EV KVH + D SHP +IYA + L
Sbjct: 677 AGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNA 736
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+K GYIP T+ VLHD+ ++ KEEA+ HSE+LA+++G+LS P+ PIRI KNLRVC DC
Sbjct: 737 IKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDC 796
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HSA K ISK+ GRE+I RDA RFHHFKDG+CSC DYW
Sbjct: 797 HSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 20/255 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
++G + G +++A + ++++ I D T+ +M AC + L A+ +H V+
Sbjct: 331 MIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAG 390
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ L VST ++ MY++C ++ DA VF M RD+ SW MI + +NG G +A +
Sbjct: 391 FGTDLLVST--ALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFET 448
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
F K++ ++PD +I + +AC LG + GM ++ +++ D +V + +++ M
Sbjct: 449 FHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKAD--LVSHVPLGNALIIMN 506
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSR- 612
G ++ A + M + DV W ++ +HGN L L DR + E+ P+
Sbjct: 507 AKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGNAREALYLFDRMLK--ERFRPNSV 563
Query: 613 -----LNEKSKAGLV 622
L+ S+AG V
Sbjct: 564 TFVGVLSACSRAGFV 578
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 42/290 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G K G ++A E+ +++ + + +F ++ C +AL KAVH
Sbjct: 230 MVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAG 289
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+ +RV+T +++MY+ C S++ A VF NM RD+ SW MI G+A+NG EDA +
Sbjct: 290 LVDDIRVAT--SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGL 347
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKH---- 549
F+ ++ G++PD ++ + +AC+ ++ + + D + ++ H
Sbjct: 348 FATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAK 407
Query: 550 ------------------YVSIVDMLGS---TGYLDEALE---FIEKMPMEPDVDVWEKL 585
VS M+G+ GY EA E +++ +EPD + L
Sbjct: 408 CGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINL 467
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG--LVPVNASELAKEK 633
+N C G L++G EI Q + L G L+ +NA + E+
Sbjct: 468 LNACGHLGALDVG---MEIYTQAIKADLVSHVPLGNALIIMNAKHGSVER 514
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G VKEA + + + + + TF ++ AC L K VH V
Sbjct: 130 IAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGF 189
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S R+ T ++ MY + SMDDA VF + RD+++++ M+ G+AK+G E A ++F
Sbjct: 190 VSDFRIGT--ALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ +Q GLKP+ F+ + C + G +H + M+ G+V ++ S++ M
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA--GLVDDIRVATSLIRMYT 305
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ G ++ A + M + DV W ++ +GN+E
Sbjct: 306 TCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIE 342
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T+ +L Q C + + K V +H+ + L + N ++K+YS C ++ +A +
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F ++ + + +W+ +I G+A+ G ++A +F Q GL+P F+ V ACS+ +
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 528 VEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
G +H + ++ G V + ++V M G +D+A + + +
Sbjct: 175 NWGKEVHAQVVTA--GFVSDFRIGTALVSMYVKGGSMDDARQVFDGL 219
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 241/404 (59%), Gaps = 9/404 (2%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + G V G ++A+++ + + + T++ + ACG+ AL+ K +H H+ +
Sbjct: 399 MVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ 458
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S N ++ MY+ C ++ +A +F M D SW+ MI+ ++G G +A+++
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALEL 518
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+ PD F+ V +AC+ G V EG +FESM +D+GI+P HY ++D+LG
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLG 578
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G + EA + I+ MP EP +WE +++ CR G++ELG A+ + ++ P
Sbjct: 579 RAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYIL 638
Query: 613 LNEKSKAGLVPVNAS---ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L+ A V+A+ +L +++ KK + +E +KVH + GDT HPE ++Y
Sbjct: 639 LSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKF 698
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + A+M++ GY+P+T+ VLHD++ KE L AHSERLAV GLL+ P A + ++KN
Sbjct: 699 LEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKN 758
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+A+ +SK VGRE+++RD +RFHHFKDG CSC +YW
Sbjct: 759 LRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 45/274 (16%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V G EA E+ + + + +D TF+ ++ AC + K+VH + RL
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQ 324
Query: 440 ---LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT--------------- 481
+ + N ++ YS+C ++ A +F NMT +D+ SW+T
Sbjct: 325 PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384
Query: 482 ----------------MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
M++G+ G EDA+ +F++ + +KP D + G +AC LG
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELG 444
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + G S +++ M G + EA MP V W
Sbjct: 445 ALKHGKQLHGHIV--QLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVS-WNA 501
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSRLN 614
+++ HG+ LEL DR + E + P R++
Sbjct: 502 MISALGQHGHGREALELFDR--MVAEGIYPDRIS 533
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+ ++ Y + A SVF + + W+ MI+G+ +G+ +A ++F +
Sbjct: 230 TWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLER 289
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYL 563
+ D+ F V SAC+ +G G +H + + VP V ++V G +
Sbjct: 290 VPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNI 349
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG--DRCAEIVEQL 608
A + M ++ DV W +++ G +E D+ E+ E++
Sbjct: 350 AVARRIFDNMTLK-DVVSWNTILS-----GYVESSCLDKAVEVFEEM 390
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 250/433 (57%), Gaps = 24/433 (5%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A Q+ N+ K D A + + G V+ G +AIEV + + + T
Sbjct: 327 ARQIFNSLKDPDVVAWTA----------MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFT 376
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ ++ A +L K +H R L S N + MY++ S++ A VF+ +
Sbjct: 377 LAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLR 436
Query: 473 E-RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ RD SW +MI A++GLGE+A+++F Q G+KPD ++GV SAC+ G V +G
Sbjct: 437 QNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGR 496
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M + I P++ HY +VD+ G G L EA +F+E MPMEPDV W L++ C++
Sbjct: 497 SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV 556
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
+ N++L AE + ++P+ N + + L V +S +L K + KK
Sbjct: 557 YKNVDLAKVAAERLLLIEPN--NSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQG 614
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +++++K H + D HP+ D+IY ++ + ++K+ G+ P+T VLHD++ E K++
Sbjct: 615 LSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQ 674
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ G++S+P +RIMKNLRVC DCH+A+K ISK+V RE+I+RDA RFH
Sbjct: 675 ILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFH 734
Query: 761 HFKDGLCSCRDYW 773
HFKDG CSC+DYW
Sbjct: 735 HFKDGSCSCKDYW 747
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S L V + +L Y + + A +F+++ + D+ +W MI G+ +NGL DA+++F
Sbjct: 303 ISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVF 362
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
G +P+ + SA S++ + G +H ++ + PS+ + ++ M
Sbjct: 363 KTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTMYA 420
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G ++ A + + D W ++ HG LG+ E+ EQ+
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHG---LGEEAIELFEQM 467
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTY 448
KV + LGL C+ P + L+ L+ AK V + ++ LR S++
Sbjct: 128 KVHSFVVKLGL--HACV----PVANSLLNMYAKTGDLKMAKVVFDRMK-----LRNTSSW 176
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGL 507
N ++ ++ C +D A + F ++ERD+ SW++MI G ++G +A+ FS K L
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSL 236
Query: 508 KPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
KPD SAC+ L G + G + +M G V + +++ M +G
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYI-VRTMFDASGAVGN-----ALISMYAKSGG 290
Query: 563 LDEALEFIEKMPM-EPDVDVWEKLMNLCRMHGNLELGD 599
++ A IE+ + + DV + L+N G ++LGD
Sbjct: 291 VEIARRIIEQSGISDLDVIAFTALLN-----GYVKLGD 323
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 442 PLRVS-TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P++ + ++N IL Y++ ++ A VF + RD SW T+I G+ + G EDA+ IF
Sbjct: 37 PVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFV 96
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + P V ++C+A G G S G+ + S+++M T
Sbjct: 97 DMVKDKVLPTQFTLTNVLASCAATGSRGIGK-KVHSFVVKLGLHACVPVANSLLNMYAKT 155
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
G L A ++M + + W +++L G ++L E++ + D N
Sbjct: 156 GDLKMAKVVFDRMKLR-NTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWN 208
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 443 LRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L S Y N ++ +Y++ DA +F+ M + SW+T+++G+AK G E A +F
Sbjct: 6 LTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFD 65
Query: 501 QFKQAGLKP--DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP---SMKHYVSIVD 555
L P D + + + +G + + F M KD ++P ++ + ++
Sbjct: 66 ------LIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD-KVLPTQFTLTNVLASCA 118
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
GS G + F+ K+ + V V L+N+ G+L++
Sbjct: 119 ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMA 161
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 255/443 (57%), Gaps = 17/443 (3%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTL--EQLDGLVKEGKVKEAI-EVLGLLEK 403
I N +M S +N+ + D + Q N L L G +G KE+ L +LE
Sbjct: 647 ILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLES 706
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMD 462
I D+ T ++ C ALE +H + ++ V ++ MYS+C ++
Sbjct: 707 D-IEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAIT 765
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A +VF NM +++ SW+ MI+G++K+G ++A+ ++ + + G+ P++ F+ + SACS
Sbjct: 766 KARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 825
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
G V EG+ F SM +DY I +HY +VD+LG G L++A EF+EKMP+EP+V W
Sbjct: 826 HTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTW 885
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEK 633
L+ CR+H ++++G A+ + +LDP S + + + ++ K K
Sbjct: 886 GALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMK 945
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH-- 691
KK + +E+ S++ + AG +HP+T++IY +R L Q K GYIP+T F+L
Sbjct: 946 GVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNV 1005
Query: 692 -DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRE 750
DI +E +EE LL HSERLA+S GL+S P ++ IR+ KNLR+CGDCH+A K ISKI GR
Sbjct: 1006 KDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRR 1065
Query: 751 LIIRDAKRFHHFKDGLCSCRDYW 773
+I RD RFHHF++G CSC DYW
Sbjct: 1066 IIARDTNRFHHFENGKCSCGDYW 1088
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 10/190 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G V+EGK +EA+E+ ++ + I D TF+ L+ C + + + + +H H+ R
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 509
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MYSEC ++ A +F+ M ER+ SW++MI G+ +NG ++A+ +F
Sbjct: 510 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 569
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LH---FESMSKDYGIVPSMKHYVSIVDM 556
Q + G+KPD + S+C +L D +G LH + ++ GI+ V +VDM
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ-----VVLVDM 624
Query: 557 LGSTGYLDEA 566
G +D A
Sbjct: 625 YAKCGSMDYA 634
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 15/192 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G VK +EA + + K + D TF+ ++ CG ++ + K VH + +
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKL--IAC 305
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ T+ N ++ MY++CD + VF M ER+ +W+++I+ A+ G DA+ +F
Sbjct: 306 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ +++G K + + A + L D+ + G L ++ D I+ S ++V
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI-ILGS-----ALV 419
Query: 555 DMLGSTGYLDEA 566
DM G ++EA
Sbjct: 420 DMYSKCGMVEEA 431
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMDD---AF 465
LP +S L+Q C D+ + + K++H + + +P IL +Y+ +DD A
Sbjct: 72 LP-YSSLIQDCIDSNSFQRGKSIHTQMISNGYNP-DAYLMTKILMLYARSGCLDDLCYAR 129
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M ER+LT+W+TMI +A+ + + ++ + + +G D F V AC A+
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
D + G+ +S G+ ++ ++VD G++D+A+ ++++
Sbjct: 190 D-MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
S LM + G A + + + +H H+ R L + + ++ MYS+C +++A VF ++ E
Sbjct: 382 SILMASAGLAD-IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLE 440
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACS 522
R+ S++ ++ G+ + G E+A++++ + + G++PD F + + C+
Sbjct: 441 RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCA 490
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G + G+ +EA+ + ++ I D + S ++ +C ++ + +H + R
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR-- 608
Query: 441 SPLRVSTYNGILK-----MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
GIL+ MY++C SMD A+ V+ ++D+ + M++ F +G DA
Sbjct: 609 ---NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDA 665
Query: 496 VDIFSQFKQAGLKPDDQIFIG 516
++F Q +Q + I G
Sbjct: 666 KNLFDQMEQRNTALWNSILAG 686
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCIS---VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++ +V + +EVL L + S D TF +++AC + + + + V +
Sbjct: 147 ILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGL 206
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ Y+ MDDA + + + +W+ +I G+ K E+A IF +
Sbjct: 207 NCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDR 266
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
+ G+ PD+ F C AL
Sbjct: 267 MLKIGVCPDNFTFASALRVCGAL 289
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 243/399 (60%), Gaps = 10/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G+V EA+ ++ + D T ++ A + AK +H + R
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MYS+C ++ A +F +++R + +W+ MI G+ +GLG A+D+F + K
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ ++P+D ++ V SACS G V EG+ HF+SM +DYG+ PSM HY ++VD+LG G +
Sbjct: 544 KGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI 603
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA +FIE MP+ P + V+ C++H N+E+G++ A+ + +L+P +
Sbjct: 604 KEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIY 663
Query: 624 VNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ S+ +K E +K + +++E+R++VH + +G T+HP++ +IYA + L
Sbjct: 664 ASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELV 723
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++K AGY+P+T +L D++ + +E+ L +HSE+LA++ GLL++ I + KNLRVCG
Sbjct: 724 YEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCG 782
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A K IS + GRE+I+RD +RFHHFK+G+CSC DYW
Sbjct: 783 DCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ G+ ++AI V + ++ I T + + AC D LE K VH+ V++L
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MYS+C +D A +F+N+ R SW+ MI G+A+NG +A++ FS
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ K G+KPD + V A + L + G++ + K+ + ++ VD
Sbjct: 440 EMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTAL------VD 493
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G + A + + M + V W +++ HG
Sbjct: 494 MYSKCGAIHMARKLFD-MISDRHVITWNAMIDGYGTHG 530
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K ++ A+ L + + + F+ L++ CGD L+ K +H +
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V G++ MY++C +DDA+ +F M ERDL SW+T+I GF++NG + A+++
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G +PD + V A + +G ++ G +H ++ + + ++ ++ DM
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIS--TALADMYSK 295
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ A + M + V W +M+
Sbjct: 296 CGSVETARLIFDGMDQKTVVS-WNSMMD 322
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G K+A+E++ ++ + D T ++ A D L K++H + R
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ + MYS+C S++ A +F M ++ + SW++M+ G+ +NG E A+ +F +
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ G+ P + AC+ LGD+ G
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ ++S+ S+++A VF + ++ + TM+ G+AKN E A+ + + +KP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 511 DQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F + C D+ G +H + ++ + ++ +V+M +D+A +
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA--ANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 570 IEKMPMEPDVDVWEKLM 586
++MP E D+ W ++
Sbjct: 205 FDRMP-ERDLVSWNTII 220
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 235/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ V + ++ I + TF ++A + +++ K VH + +
Sbjct: 647 VSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 706
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N I+ MY++C S+ DA F ++ ++ SW+ MI ++K+G G +A+D F Q
Sbjct: 707 DSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQ 766
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ +GV SACS +G V +G+ +FESM+ +YG+ P +HYV +VDML G
Sbjct: 767 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAG 826
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-----RLNEK 616
L A +FI +MP+EPD VW L++ C +H N+E+G+ A + +L+P L
Sbjct: 827 LLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 886
Query: 617 SKAGLVPVNASELA----KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A +A +L KEK KK Q+ +EV++ +H + GD +HP D+I+ +
Sbjct: 887 LYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKD 946
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + E GY+ + +L ++ QE K+ + HSE+LA+S GLLS PA PI +MKNLRV
Sbjct: 947 LTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRV 1006
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH +K +SK+ RE+I+RDA RFHHF+ G CSC+DYW
Sbjct: 1007 CNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 410 LPT---FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+PT FS ++ AC ++LE + +H V +L N ++ +Y S+ A
Sbjct: 268 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+FSNM++RD +++T+I G ++ G GE A+++F + + GL+PD + ACS+ G
Sbjct: 328 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387
Query: 527 VVEGM--------LHFESMSKDYGIVPSMKHYVSIVD-------------------MLGS 559
+ G L F S K G + ++ S ++ ML +
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVA 447
Query: 560 TGYLDE---ALEFIEKMPME---PDVDVWEKLMNLCRMHGNLELGDR 600
G LD+ + +M +E P+ + ++ C G+LELG++
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 494
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++ C LE + +H + + L + ++ MY++ +D A+ +
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ SW TMI G+ + + A+ F Q G++ D+ SAC+ L + EG
Sbjct: 535 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 593
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 233/406 (57%), Gaps = 11/406 (2%)
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
GT+ + G V+ G++++A++ L +Q + + L+ A LE K +H
Sbjct: 235 GTI--ISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIA 292
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
L P+ S ++ MY++C +D++ +F M E+D SW+ MI G A +GLG++A+
Sbjct: 293 NSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEAL 352
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F +F G P + FIGV +ACS G V EG F+ M+ YGI P M+HY +VD+
Sbjct: 353 ALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDL 412
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS----- 611
L G++ +A+E I +MP PD +W ++ C++HG +ELG+ + Q+DP+
Sbjct: 413 LSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHY 472
Query: 612 ----RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
R+ + + L E+ + K+A +L+E +VH + AGD H T +IY
Sbjct: 473 VQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIY 532
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++ + ++ AGY VLHDI++E KE A+ HSERLA++ GLL + IRI+
Sbjct: 533 KMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRII 592
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH KIIS + RE+I+RD RFHHFK G+CSC+DYW
Sbjct: 593 KNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 45/289 (15%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK---EGKVKEAIEVLGLL 401
G I + ++A +++ D+A + +S ++ T+ + +++ +G + + L
Sbjct: 63 GRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFVKGDLPR--HSISLY 120
Query: 402 EKQCIS-VDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
C S V P T + ++QAC +A A+ E V HV +L V N ++ +Y
Sbjct: 121 SHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCT 180
Query: 458 CDSMDDAFSVFSN--------------------------------MTERDLTSWDTMITG 485
C ++ A VF M E+D+ SW T+I+G
Sbjct: 181 CCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISG 240
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIV 544
+NG E A+D F + + L+P++ I + + +A + LG + G +H + S + +
Sbjct: 241 CVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMT 300
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
S+ ++VDM G +DE+ ++MP E D W ++ HG
Sbjct: 301 ASLG--TALVDMYAKCGCIDESRFLFDRMP-EKDKWSWNVMICGLATHG 346
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 235/409 (57%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + ++ ++V + + + + + S ++ C + AL + +H+ V +
Sbjct: 266 MIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSK-- 323
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SPL T ++ MY +C +D A+ +F M +D+ SW+ MI+G+A++G G A+ +
Sbjct: 324 SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHL 383
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + +KPD F+ V AC+ G V G+ +F+SM K++GI HY ++D+LG
Sbjct: 384 FDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLG 443
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G LDEA+ I++MP +P ++ L+ CR+H NL+L + A + LDP+ S
Sbjct: 444 RAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPT-----SA 498
Query: 619 AGLVPV--------------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
G V + ++ KE K+ + +E++S HE+R+ D HPE
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
I+ + L +MK AGY+P+ F LHD+++E KE+ LL HSE+LA++ GL+ + PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+ KNLRVCGDCH A+K IS I RE+I+RD RFHHF++G CSC DYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G++++A ++ ++ EK +S +S ++ + LE A+ ++++V +
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVS-----WSAMISGYVEHGDLEAAEELYKNVG--M 226
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V T +L Y + ++ A +F M ++L +W++MI G+ +N ED + +F
Sbjct: 227 KSVVVET--AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ ++P+ V CS L + G + +SK + S++ M
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS-PLSKDTTACTSLISMYCKC 343
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G LD A + +MP + DV W +++ HG
Sbjct: 344 GDLDSAWKLFLEMPRK-DVISWNAMISGYAQHG 375
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
G K + K HE +++ P VS YN +L Y ++ A + F+ M +D+ SW+
Sbjct: 113 GYTKVAGKVKEAHELFDKIPEPDSVS-YNIMLVCYLRSYGVEAALAFFNKMPVKDIASWN 171
Query: 481 TMITGFAKNGLGEDAVDIFS 500
T+I+GFA+NG + A D+FS
Sbjct: 172 TLISGFAQNGQMQKAFDLFS 191
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQFK 503
VS I CD ++ A +VF M+ R +W+TM++G+ K G ++A ++F +
Sbjct: 74 VSLNKTIASFVRACD-LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP 132
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ D + + C VE L F + V + + +++ G +
Sbjct: 133 EP-----DSVSYNIMLVCYLRSYGVEAALAFFNKMP----VKDIASWNTLISGFAQNGQM 183
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+A + MP + V W +++ HG+LE + + V + + G +
Sbjct: 184 QKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLEAAEELYKNV-GMKSVVVETAMLTGYMK 241
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEY 653
ELA E+ +++A +NL+ S + Y
Sbjct: 242 FGKVELA-ERIFQRMAVKNLVTWNSMIAGY 270
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 381 QLDGLVK-EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
L G K GKVKEA E+ + + D +++ ++ + +E A A +
Sbjct: 110 MLSGYTKVAGKVKEAHELFDKIPEP----DSVSYNIMLVCYLRSYGVEAALAFFNKM--- 162
Query: 440 LSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
P++ ++++N ++ +++ M AF +FS M E++ SW MI+G+ ++G E A ++
Sbjct: 163 --PVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEEL 220
Query: 499 FSQFKQAGLK 508
+K G+K
Sbjct: 221 ---YKNVGMK 227
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 245/445 (55%), Gaps = 15/445 (3%)
Query: 344 SGNIQNGMMASQVLN---NCKHED---DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEV 397
SG + NG + + +++ NC+ E R + G K G +A+E+
Sbjct: 257 SGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALEL 316
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
G + D T ++ AC AL V +V + + V ++ MY+
Sbjct: 317 FGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYAN 376
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ A VF M E++L + M+TGF +G G +A+ IF + G+ PD+ IF V
Sbjct: 377 CGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
SACS G V EG F M++DY + P HY +VD+LG GYLDEA IE M ++P
Sbjct: 437 LSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKP 496
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASE 628
+ DVW L++ CR+H N++L A+ + +L+P S + + N
Sbjct: 497 NEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRA 556
Query: 629 LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF 688
L ++ +K S + +E+ VH++ GDTSH ++D IYA ++ L Q+K+AGY P+T
Sbjct: 557 LVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSL 616
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
VL+D+++E KE+ L HSERLA++ L+++ IRI KNLRVCGDCH+ +K+ISK+
Sbjct: 617 VLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTN 676
Query: 749 RELIIRDAKRFHHFKDGLCSCRDYW 773
RE+I+RD RFHHF+DGLCSC YW
Sbjct: 677 REIIMRDICRFHHFRDGLCSCGGYW 701
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK G+ + A EV G + + D T L+ ACGD L+ K +H +V R
Sbjct: 196 MMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG 255
Query: 441 SPLRVS---TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
RV N I+ MY C+S+ A +F + +D+ SW+++I+G+ K G A++
Sbjct: 256 ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALE 315
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + G PD+ I V +AC+ + + G +S G V ++ +++ M
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQISALRLGA-TVQSYVVKRGYVVNVVVGTALIGMY 374
Query: 558 GSTGYLDEALEFIEKMP 574
+ G L A ++MP
Sbjct: 375 ANCGSLVCACRVFDEMP 391
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
T+ +++ACGD E + VH V ++ L Y N IL MY + ++ A VF
Sbjct: 126 TYPFVLKACGDLLLREMGRKVHALV--VVGGLEEDVYVGNSILSMYFKFGDVEAARVVFD 183
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M RDLTSW+TM++GF KNG A ++F ++ G D + + SAC GDV++
Sbjct: 184 RMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSAC---GDVMD 240
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTE 473
L+Q+ ++K+L +A +H HV LR +TY + Y+ C M A +F +
Sbjct: 28 LLQSLTNSKSLTQALQLHAHVTTG-GTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVV 528
++ W++MI G+A N A+ ++ + G KPD+ + V AC L G V
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 529 EGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ + +D YV SI+ M G ++ A ++M + D+ W +M
Sbjct: 147 HALVVVGGLEEDV--------YVGNSILSMYFKFGDVEAARVVFDRMLVR-DLTSWNTMM 197
Query: 587 N 587
+
Sbjct: 198 S 198
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 230/371 (61%), Gaps = 10/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+++ L AC LE+ K VH ++ + L N +L MY++ S+ DA +F +
Sbjct: 255 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 314
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW++++T +A++G G +AV F + ++ G++P++ F+ V +ACS G + EG
Sbjct: 315 AKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGW 374
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++E M KD GIV HYV+IVD+LG G L+ AL FIE+MP+EP +W+ L+N CRM
Sbjct: 375 HYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 433
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKEN--KKLASQN 642
H N ELG AE V +LDP N + G A K KE+ KK + +
Sbjct: 434 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 493
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ + +H + A D HP+ ++I + A++KE GY+P+T V+ +DQ+ +E L
Sbjct: 494 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 553
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE++A++ LL++P + I I KN+RVCGDCHSA+K+ SK VGRE+I+RD RFHHF
Sbjct: 554 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHF 613
Query: 763 KDGLCSCRDYW 773
KDG CSC+DYW
Sbjct: 614 KDGACSCKDYW 624
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
LE I VD ++ L++ C K L + + VH H+ + + + N +L MY++C S
Sbjct: 42 LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+++A VF M ERD +W T+I+G++++ DA+ +F+Q + G P++ V A
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161
Query: 521 CSA 523
+A
Sbjct: 162 AAA 164
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + +L +Y+ MDDA VF + R+ SW+ +I G A+ E A+++F +
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G +P + +F ACS+ G + +G +H + +V + +++DM +G +
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSI 304
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A + +++ + DV W L+ HG
Sbjct: 305 HDARKIFDRLA-KRDVVSWNSLLTAYAQHG 333
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 240/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ ++ G +E++ + ++++ + TF+ L+ AC AL +H VE+L
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGF 353
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MYS+ S+D +++VF++M RD+ +W+ MI G++ +GLG+ A+ +F
Sbjct: 354 KNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQD 413
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
A P+ FIGV SA S LG V EG + + +++ I P ++HY +V +L G
Sbjct: 414 MVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAG 473
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEA F++ ++ DV W L+N C +H N +LG R AE V Q+DP S
Sbjct: 474 LLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSN 533
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ K++ V +L +E+ KK + L++R+ +H + + ++HPE+ +IY ++
Sbjct: 534 MYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQ 593
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L A +K GY+P VLHD++ E KE L HSE+LA+++GL+ P+ APIRI+KNLR+
Sbjct: 594 LLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRM 653
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K+ISK+ R +I+RDA RFHHF+DG C+C D+W
Sbjct: 654 CDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 109/211 (51%), Gaps = 14/211 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L+ LV+ G+ +EA+EVL + +C++ D T+ +M C + L+ VH + R
Sbjct: 193 LNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLR--G 250
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + G ++ MY +C + +A +VF + R++ W ++T + +NG E+++++F
Sbjct: 251 GLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLF 310
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH--FESMS-KDYGIVPSMKHYVSIVD 555
+ + G P++ F + +AC+ + + G +LH E + K++ IV + ++++
Sbjct: 311 TCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRN-----ALIN 365
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M +G +D + M + D+ W ++
Sbjct: 366 MYSKSGSIDSSYNVFTDM-IYRDIITWNAMI 395
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 420 CGDAKALEEAKAVHEHV---ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
C D K L KA+H + + +S N ++ +Y +C + A ++F M R++
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLK---PDDQIFIGVFSACSALGDVVEGML 532
SW+ ++ G+ G + +++ FK L+ P++ +F SACS G V EGM
Sbjct: 82 VSWNVLMAGYLHGG---NHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGM- 137
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ +G+V ++V M +++ AL+ ++ +P E D++
Sbjct: 138 QCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIF 187
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F+ + AC ++E H + + + ++ MYS C ++ A V +
Sbjct: 119 VFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTV 178
Query: 472 T---ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
D+ S+++++ ++G GE+AV++ + + D ++GV C+ + D+
Sbjct: 179 PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238
Query: 529 EGM-LHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G+ +H + V SM ++DM G G + A + + +V VW
Sbjct: 239 LGLRVHARLLRGGLMFDEFVGSM-----LIDMYGKCGEVLNARNVFDGLQ-NRNVVVWTA 292
Query: 585 LMN 587
LM
Sbjct: 293 LMT 295
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 237/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L GL + G ++A+ + ++++ I+ + TF L+ +C +L+ +++H H+ RL
Sbjct: 403 MLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLG 462
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSN-MTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ ++ MY++C ++ A +FS+ +D+ W++MITG+ +G G AV I+
Sbjct: 463 FAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIY 522
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + GLKP+ F+ + SACS V +G+ F SM +D+ I P KHY +VD+L
Sbjct: 523 HKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSR 582
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G +EA IEKMP +P V E L++ CR H N+ LG + ++ + LD +N
Sbjct: 583 AGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDA--MNPGIYI 640
Query: 620 GLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + A L + + KK +L+E + VH + AGD SHP ++IY
Sbjct: 641 MLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYH 700
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ LR+ ++ +GY+P+T VL D+D+E K L HSERLA++ GLL++PA + IRI K
Sbjct: 701 FLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITK 760
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+ K ISKIV RE+I+RDA RFHHF +G CSC DYW
Sbjct: 761 NLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 10/218 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G V E+ ++ L + DL T L+Q C +L K +H R
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSF 362
Query: 441 -SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S L +ST I+ +YS+C S+ A VF+ M +R++ +W M+ G A+NG EDA+ +F
Sbjct: 363 ESNLILST--AIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGML---HFESMSKDYGIVPSMKHYVSIVDM 556
+Q ++ G+ + F+ + +C+ LG + G H + + IV + ++VDM
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIV----NMTALVDM 476
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G ++ A + DV +W ++ MHG+
Sbjct: 477 YAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G A ++ + I T + L+QACG L+ K +H +V L
Sbjct: 203 IGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGL 262
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + MYS+ ++ A VF M R+L SW+ MI+G +NGL ++ D+F +
Sbjct: 263 GNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHR 322
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESM-SKDYGIVPSMKHYVSIVDMLGS 559
++ D + + CS + G +LH ++ S + ++ S +IVD+
Sbjct: 323 LVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILS----TAIVDLYSK 378
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L +A +M + +V W ++
Sbjct: 379 CGSLKQATFVFNRMK-DRNVITWTAML 404
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 4/214 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA-KAVHEHVERL 439
L G ++ G+ +E +E+ GL+ + + VD + + ++AC + E + + VE+
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ R + ++ + + +A VF M +D+ W+++I G+ + G + A +F
Sbjct: 161 MEKNRF-VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLF 219
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +G+KP + AC +G++ G G+ + S VDM
Sbjct: 220 FEMHGSGIKPSPITMTSLIQACGGIGNLKLGKC-MHGYVLGLGLGNDILVLTSFVDMYSK 278
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A KMP V W +++ C +G
Sbjct: 279 MGDIESARWVFYKMPTRNLVS-WNAMISGCVRNG 311
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 241/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G G+ EA+ + + + + D T L+ A + ALE + VH ++ ++
Sbjct: 190 MINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG 249
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N +L +Y++C ++ +A VFS M+ER+ SW ++I G A NG GE+A+++F
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFK 309
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GL P + F+GV ACS G + EG +F M ++ GI+P ++HY +VD+L
Sbjct: 310 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA 369
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G + +A E+I+ MP++P+ +W L+ C +HG+L LG+ + L+P
Sbjct: 370 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLS 429
Query: 613 ---LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+E+ + + + S L + KK +L+E+ ++V+E+ GD SHP++ +YAL
Sbjct: 430 NLYASERRWSDVQVIRRSML--KDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYAL 487
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K GY+P T VL DI++E KE+AL HSE++A++ LL++P PIR+MKN
Sbjct: 488 LEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKN 547
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A+K+I+KI RE++IRD RFHHF+ G CSC+DYW
Sbjct: 548 LRVCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
C+ D T+ L++A + + E +A+H R V N +L +Y+ C + A
Sbjct: 113 CVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESA 172
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ VF M ERDL +W++MI GFA NG +A+ +F + G++PD + + SA + L
Sbjct: 173 YKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAEL 232
Query: 525 GDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
G + V L +SK+ + S+ +D+ G + EA +M E +
Sbjct: 233 GALELGRRVHVYLLKVGLSKNSHVTNSL------LDLYAKCGAIREAQRVFSEMS-ERNA 285
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
W L+ ++G G+ E+ ++++
Sbjct: 286 VSWTSLIVGLAVNG---FGEEALELFKEME 312
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 247/404 (61%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +EA+++ + ++ ++ D T + + AC + +E+ + VH VE+L
Sbjct: 319 MVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + I+ MY++C +++DA S+F +++ W +M+ +A +G G A+++F
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + P++ +GV SACS +G V EG L+F+ M ++YGIVPS++HY IVD+ G +
Sbjct: 439 RMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRS 498
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD+A FIE+ + + VW+ L++ CR+H + E +E + QL+ + + S
Sbjct: 499 GLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLE--QCDAGSYVM 556
Query: 621 LVPVNAS--------EL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ EL +E++ +K ++ + +++ VH + AGD SHP++ +IYA
Sbjct: 557 LSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAY 616
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++KE GY T V+HD++ E +E AL HSE+LA++ G++S+P+ P+RI KN
Sbjct: 617 LEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKN 676
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A+K IS GRE+++RD RFHHFKD CSC D+W
Sbjct: 677 LRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 26/254 (10%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL++ G +A+ L + + + + T+S G + + +H V L++
Sbjct: 216 ISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRV--LIA 273
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMT--ERDLT-SWDTMITGFAKNGLGEDAV 496
L + + ++ MY +C ++ A SVF + + RD+ +W TM+ G+ +NG E+A+
Sbjct: 274 ALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEAL 333
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----- 551
D+F + + G+ D V +AC+ +G V +G + +G V + + +
Sbjct: 334 DLFRRMLREGVAADRFTLTSVAAACANVGMVEQG-------RQVHGCVEKLWYKLDAPLA 386
Query: 552 -SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
+IVDM G L++A ++ ++ VW ++ HG G E+ E++
Sbjct: 387 SAIVDMYAKCGNLEDARSIFDR-ACTKNIAVWTSMLCSYASHGQ---GRIAIELFERMTA 442
Query: 611 SRL--NEKSKAGLV 622
++ NE + G++
Sbjct: 443 EKMTPNEITLVGVL 456
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 48/215 (22%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ +++ C +E K VH + R L V N +L MY++C + A VF M
Sbjct: 114 VLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAM 173
Query: 472 TERDL-------------------------------TSWDTMITGFAKNGLGEDAVDIFS 500
ERD TSW+T+I+G ++G DA+
Sbjct: 174 AERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLR 233
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY---GIVPSMK--HYV--SI 553
+ QAG+ + + F V+ GML + + ++ +++ +V S+
Sbjct: 234 RMAQAGVVFNHYTYSTAF--------VLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSL 285
Query: 554 VDMLGSTGYLDEALEFIEKM-PMEPDVD-VWEKLM 586
+DM G L+ A + P+ D++ W ++
Sbjct: 286 MDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMV 320
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 3/146 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKP 509
+L+ + DA VF R W I+G A+ G D + F++ G P
Sbjct: 51 VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ + V C+ +GDV G M ++ G+ + +++DM G + A
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-GVHLDVVLCNAVLDMYAKCGQFERARRV 169
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNL 595
M E D W + C G++
Sbjct: 170 FGAMA-ERDAVSWNIAIGACIQSGDI 194
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 250/432 (57%), Gaps = 22/432 (5%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A + ++ KH D A + + G + G + +A+ + L+ ++ + T
Sbjct: 365 ARAIFDSLKHRDVVAWTA----------MIVGYAQNGLISDALVLFRLMIREGPKPNNYT 414
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ ++ +L+ K +H RL VS N ++ MYS S+ DA +F+++
Sbjct: 415 LAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHIC 474
Query: 473 E-RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W +MI A++GLG +A+++F + + LKPD ++GV SAC+ +G V +G
Sbjct: 475 SYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK 534
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F M + I P+ HY ++D+LG G L+EA FI MP+EPDV W L++ CR+
Sbjct: 535 SYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRV 594
Query: 592 HGNLELGDRCAEIVEQLDP-------SRLNEKSKAGLVPVNASELAKEKENKKLASQ--- 641
H ++L AE + +DP + N S G +A+++ K ++K + +
Sbjct: 595 HKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWE-DAAKVRKSMKDKAVKKEQGF 653
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +++++KVH + D HP+ D IY +I + ++K+ G+IP+T VLHD++QE KE+
Sbjct: 654 SWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQI 713
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA++ L+++P +RIMKNLRVC DCHSA++ IS +V RE+I+RDA RFHH
Sbjct: 714 LRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHH 773
Query: 762 FKDGLCSCRDYW 773
FKDG CSC+DYW
Sbjct: 774 FKDGSCSCQDYW 785
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 42/270 (15%)
Query: 382 LDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G +G A+E +L+ + D T ++ AC + ++L+ K +H H+ R
Sbjct: 249 ITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRAD 308
Query: 439 ----------LLS---------------------PLRVSTYNGILKMYSECDSMDDAFSV 467
L+S L V + +L Y + +D A ++
Sbjct: 309 VDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAI 368
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F ++ RD+ +W MI G+A+NGL DA+ +F + G KP++ V S S+L +
Sbjct: 369 FDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASL 428
Query: 528 VEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G LH ++ + V S+ +++ M +G + +A + + D W ++
Sbjct: 429 DHGKQLHAVAIRLEE--VSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMI 486
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
HG LG+ E+ E++ R+N K
Sbjct: 487 LSLAQHG---LGNEAIELFEKM--LRINLK 511
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 47/257 (18%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G K A+ + IS TF+ ++ +C A+AL+ K VH V +L V
Sbjct: 124 GLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVA 183
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM-------------------------- 482
N +L MY++C A VF M +D ++W+TM
Sbjct: 184 NSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIV 243
Query: 483 -----ITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFE 535
ITG+ G A++ FS K + LKPD V SAC+ + G +H
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
+ D I ++ + +++ M +G ++ A +E + P ++V + + G
Sbjct: 304 IVRADVDIAGAVGN--ALISMYAKSGAVEVAHRIVE-ITGTPSLNV---IAFTSLLDGYF 357
Query: 596 ELGDRCAEIVEQLDPSR 612
++GD +DP+R
Sbjct: 358 KIGD--------IDPAR 366
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 442 PLRVS-TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
PL+ + ++N IL +++ ++D A VF + + D SW TMI G+ GL + AV F
Sbjct: 75 PLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFL 134
Query: 501 QFKQAGLKPDDQIFIGVFSACSALG--DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ +G+ P F V ++C+A DV + + F G+VP S+++M
Sbjct: 135 RMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLNMYA 191
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKL----MNLCRMHGNLELGDRCAE 603
G A ++M ++ D W + M C+ L L D+ +
Sbjct: 192 KCGDSVMAKVVFDRMRLK-DTSTWNTMISMHMQFCQFDLALALFDQMTD 239
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 232/403 (57%), Gaps = 11/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +EA+ + ++ ++ + T ++ AC ALE K VH ++ R
Sbjct: 344 MISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKD 403
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
PL V ++ Y++C + DA F +M R+ +W +I G A NG +A+++FS
Sbjct: 404 LPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFS 463
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+A ++P D FIGV ACS V EG HF SM++DYGI P ++HY +VD+LG
Sbjct: 464 SMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRA 523
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G +DEA +FI MP+EP+ VW L++ C +H N+E+G+ + + LDP
Sbjct: 524 GLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLS 583
Query: 614 NEKSKAGLVPVNASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + G NA+ + KE + K K+ +L+E+ + E+ A D+ HP+ +IY +
Sbjct: 584 NTYASVGQWK-NAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKV 642
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +K GYIP T D+D+ K+ ++ HSE+LA++ GL+ S A IR+ KNL
Sbjct: 643 HEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNL 702
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA K+ISK+ RE+I+RD RFHHFKDGLCSC DYW
Sbjct: 703 RVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G VK G KE +E+ G+LE + D T + ACG + + E+ E
Sbjct: 243 MIAGYVKNGDWKEVVEMFKGMLEVRA-PFDEVTLLSVATACGRLGDANLGQWIAEYAEEK 301
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+L ++T ++ MY++C +D A +F M RD+ +W MI+G+ ++ +A+
Sbjct: 302 GMLRSRNLAT--ALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
IF++ + + P+D + V SAC+ LG + G +H KD + + ++VD
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILG--TALVDF 417
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + +A++ E MP+ + W L+
Sbjct: 418 YAKCGCIKDAVKAFESMPVR-NTWTWTALIK 447
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEA 429
RS+++ L + ++ G ++A+ + + +L+ +S D T + +++C L
Sbjct: 133 RSARSYNIL--IRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+ V + + + N ++ MY+ C + A +F + + + +W+ MI G+ KN
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G ++ V++F + D+ + V +AC LGD G E +++ G++ S
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAE-YAEEKGMLRSRNL 309
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
++VDM G LD+A ++M DV W +++ DRC E
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSR-DVVAWSAMIS------GYTQSDRCRE 356
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 236/394 (59%), Gaps = 18/394 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNG 450
E LGL + S P TF ++ AC + AL+ K VH +V++ + ++ V+ +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C + A +F M + L +W+ MI+GFA +G + A+ +FS+ G PD
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
D F+GV +AC G + G +F SM +DY + P + HY ++D+ G G DEA +
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---- 626
+ M M+PD +W L+ CR+H +EL + A+ + +L+P N + L + A
Sbjct: 525 KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPE--NPSAYVLLSNIYAGAGR 582
Query: 627 -SELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
++AK + KK+ + +EV S VHE+ GD HP++++IY ++ + ++++
Sbjct: 583 WEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEK 642
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG++P+T VL+D+D+E KE L HSE+LA++ GL+S+ IRIMKNLRVCG+CHSA
Sbjct: 643 AGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSA 702
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISKI RE+I RD RFHHFKDG CSC+DYW
Sbjct: 703 TKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA-KALEEAKAVHEHVERL 439
+ G + G+V+EA+ + + ++ ++ T ++ AC + +L+ V +E
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR 290
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ NG++ MY +C +++A ++F + ++++ SW+ MI G+ ++A+ +F
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLF 350
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH----YVSIVD 555
+ Q+ + P+D F+ + AC+ LG + G + K+ + SMK+ + S++D
Sbjct: 351 RRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN---MKSMKNTVALWTSLID 407
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
M G L A + M + + W +++ MHG+
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGH 445
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS------------ECD 459
TF + ++C + E K VH HV +L + ++ MY+ +
Sbjct: 130 TFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKS 189
Query: 460 SMDDAFS-------------------VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
SM DA S +F + RD+ SW+ MI+G+A++G E+A+ F
Sbjct: 190 SMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFE 249
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++A + P+ + V SAC+ G ++ S +D G+ +++ ++DM
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309
Query: 561 GYLDEALEFIEKM 573
G L+EA EK+
Sbjct: 310 GDLEEASNLFEKI 322
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 223/376 (59%), Gaps = 17/376 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
T S ++ AC A+ K +H +V R S Y N ++ MYS+C +D A VF
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRH-HRYESSAYFVANCLIDMYSKCGDVDTARHVF 576
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+M+++ SW +M+TG+ +G G +A+DIF + ++AG PDD F+ V ACS G V
Sbjct: 577 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 636
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ +F+SMS DYG+ P +HY +D+L +G LD+A ++ MPMEP VW L++
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR+H N+EL + + +++ N+ S + + A+ L K+ KK
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAE--NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 754
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ ++ + + GD SHP + +IYAL+ L ++K GY+PET F LHD+D+E
Sbjct: 755 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 814
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K L+ HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+++RD
Sbjct: 815 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 874
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFK+G CSC YW
Sbjct: 875 RFHHFKNGSCSCGGYW 890
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ ACG KA+ + K VH + R + V N ++ Y++C M++A VF
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ M +D+ SW+ M+ G++++G E A ++F ++ + D + V + S G
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
E + F M G +P+ +S++ S G + E
Sbjct: 384 EALNLFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 423
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 32/247 (12%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR------- 444
E L L + S LP T ++ AC A + +H + ++ L L
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 443
Query: 445 --VSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ YN ++ MYS+C S A S+F + + ER++ +W MI G A+ G DA+ +F
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 503
Query: 501 QF--KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDM 556
+ + G+ P+ + AC+ L + G + + S ++V+ ++DM
Sbjct: 504 EMISEPYGVAPNAYTISCILMACAHLAAIRIGK-QIHAYVLRHHRYESSAYFVANCLIDM 562
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G +D A + M + + W +M MHG R +E ++ D R
Sbjct: 563 YSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG------RGSEALDIFDKMR---- 611
Query: 617 SKAGLVP 623
KAG VP
Sbjct: 612 -KAGFVP 617
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+K+G++ AI V + + D T +++ACG+ + A H + V
Sbjct: 131 IKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV 190
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MYS C S+++A +F +T+R D+ SW+++++ K+ A+D+FS+
Sbjct: 191 FICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM 250
Query: 503 ------KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVD 555
K + D + + AC +L V + +H ++ G P + +++D
Sbjct: 251 TLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALID 308
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G ++ A++ M + DV W ++ GN E
Sbjct: 309 AYAKCGLMENAVKVFNMMEFK-DVVSWNAMVAGYSQSGNFE 348
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 42/214 (19%)
Query: 405 CISVDL-PT-FSQLMQACGDAKALEEAKAVHEHV----------------------ERLL 440
CI VD+ P+ F+ L++ C A + + +H+ + E +
Sbjct: 30 CIGVDVYPSHFASLLKECKSANTVHQ---IHQQIIASGLLSLPTPLLSVSLPALPSEPFI 86
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
SP + T G++ Y C + D A V +T W+ +I K G + A+++
Sbjct: 87 SPRSLGT--GVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +AG +PD V AC L G G++ + I ++ V
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNAL------VA 198
Query: 556 MLGSTGYLDEALEFIEKMPME--PDVDVWEKLMN 587
M G L+EA +++ DV W +++
Sbjct: 199 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVS 232
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 232/386 (60%), Gaps = 10/386 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ + + + P + L+ G+ A + + +H +L + N ++
Sbjct: 533 EAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALV 592
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C S D + VF +M ERD+ +W+T+ITG+A++GLG +A+ ++ AG+ P++
Sbjct: 593 SMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+G+ ACS G V EG F+SMS DYG+ P ++HY +VD+LG G + A FI
Sbjct: 652 TFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYD 711
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--P 623
MP+EPD +W L+ C++H N+E+G R AE + ++PS N S G+
Sbjct: 712 MPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEV 771
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+L KE+ K + +++++K+H + GD H + IYA + L +K GY+
Sbjct: 772 AKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYV 831
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T FVLHDID+E KE +LL HSE+LAV++GLL +P PI+IMKNLR+CGDCH+ +K +
Sbjct: 832 PDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFV 891
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSC 769
S + RE+ +RD RFHHF++G CSC
Sbjct: 892 SSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ ++A+ L L ++ + L + + AC + +ALE K VH +
Sbjct: 389 MIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAG 448
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ +Y + S+ +F MT +D S+++ ++ +N L ++A D+F+
Sbjct: 449 CQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
PD + + SAC+ E + F SM
Sbjct: 509 NMPS----PDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS++N +L Y M++A ++F M ER+ SW MI+G+ A D+F
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC 216
Query: 505 AGLKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGI-VPSMKHYVSIVDMLG 558
G+ P+ + V SA LG + + ++H +D + + Y V+M
Sbjct: 217 EGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNM-- 274
Query: 559 STGYLDEALEFIEKM 573
LD A++F E M
Sbjct: 275 ----LDSAVKFFEGM 285
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+P+ + ++ +++AK + + + P V ++N ++ Y + + +D+A +F+
Sbjct: 321 VPSRTSMLTGLARYGRIDDAKILFDQIH---EP-NVVSWNAMITGYMQNEMVDEAEDLFN 376
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-- 527
M R+ SW MI G+A+NG E A+ + G+ P F ACS + +
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436
Query: 528 --------VEGMLHFES-----MSKDYG---------------IVPSMKHYVSIVDMLGS 559
V+ F S + YG V Y S + L
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQ 496
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
DEA + MP PDV W +++ C
Sbjct: 497 NNLFDEARDVFNNMP-SPDVVSWTTIISAC 525
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+N ++ Y + + A +F M RD++SW+TM+TG+ + L E+A ++F + +
Sbjct: 128 AWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERN 187
Query: 507 LKPDDQIFIGVFSACSALG---DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ I + G D+ ML E M+ + P++ +S V LG G L
Sbjct: 188 -GVSWTVMISGYVLIEQHGRAWDMFRTML-CEGMTPEQ---PNLVSVLSAVRHLGKPGIL 242
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
+ + K E DV V ++N
Sbjct: 243 ESIHVLVHKTGFERDVVVGTAILN 266
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 214/373 (57%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS-- 469
T ++ AC LE + +HE R+ S + MY++C S+ DA + F
Sbjct: 307 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 366
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
N E++L +W+TMIT +A G G AV F + QAG++PDD F G+ S CS G V
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDV 426
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ +F MS Y I P ++HY + D+LG G L EA + + +MPM +W L+ C
Sbjct: 427 GLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAAC 486
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPV--NASELAKEKENKKLAS 640
R H NLE+ + A + L+P N ++AG + K + KK
Sbjct: 487 RKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPG 546
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ K H + GDTSHP+ +IY + L +MK AGY P+T +VLHDI +E KE
Sbjct: 547 CSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEF 606
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L+AHSE+LAV+ G+L++PA +R+ KNLR+CGDCH+A+ IS+I GRE+I+RD RFH
Sbjct: 607 NLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFH 666
Query: 761 HFKDGLCSCRDYW 773
HFK G CSC DYW
Sbjct: 667 HFKGGCCSCGDYW 679
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++++ + ++ K VH + R+ + ++ +Y +C ++DA VF
Sbjct: 170 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 229
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
NMT RD++SW+ ++ G+ K+G + A+ IF + + + + S S G
Sbjct: 230 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVS----WTTMISGYSQSGLAQ 285
Query: 529 EGMLHFESMSK-DYGIVPSMKHYVSIVDMLGSTGYLD 564
+ + F+ M K D G+ P ++V+I+ +L + L
Sbjct: 286 QALSLFDEMVKEDSGVRP---NWVTIMSVLPACAQLS 319
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 252/427 (59%), Gaps = 18/427 (4%)
Query: 364 DDFAEASR-----SSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
D F EA+R + Q++ L G V++G ++ +++ + + I D T++ ++
Sbjct: 390 DKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASIL 449
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+AC + +L K +H + R V + + ++ MY++C S+ +A +F M R+
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
SW+ +I+ +A+NG G A+ F Q +GL+P+ F+ + ACS G V EG+ +F SM
Sbjct: 510 SWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSM 569
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
++ Y + P +HY S+VDML +G DEA + + +MP EPD +W ++N CR+H N EL
Sbjct: 570 TQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQEL 629
Query: 598 GDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQNLLEV 646
+ A+ + + R + + + A+ + +E+ +K+ + + +E+
Sbjct: 630 AIKAADQLFNMKGLR-DAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEI 688
Query: 647 RSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHS 706
+ K H + A DTSHP+T +I + L QM+E GY P++ LH++D+E K E+L HS
Sbjct: 689 KQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHS 748
Query: 707 ERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
ER+A++ L+S+P +PI +MKNLR C DCH+A+K+ISKIV RE+ +RD+ RFHHF DG
Sbjct: 749 ERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGS 808
Query: 767 CSCRDYW 773
CSC+DYW
Sbjct: 809 CSCKDYW 815
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+V+E++E+ L+ F+ L+ ++ LE + +H + V
Sbjct: 320 GRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVG 379
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++CD +A +F+++ + W +I+G+ + GL ED + +F + +A +
Sbjct: 380 NSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIG 439
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
D + + AC+ L + G LH + G + ++ ++VDM G + EAL
Sbjct: 440 ADSATYASILRACANLASLTLGKQLHSRIIRS--GCLSNVFSGSALVDMYAKCGSIKEAL 497
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+ ++MP+ V W L++
Sbjct: 498 QMFQEMPVRNSVS-WNALIS 516
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 133/296 (44%), Gaps = 15/296 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + EA + + + + D T + L+ + +++ E VH HV ++
Sbjct: 111 IGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGY 170
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L Y + S+ A +F +M E+D +++ ++TG++K G DA+++F +
Sbjct: 171 DSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFK 230
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G +P + F V +A + D+ G S V ++ +++D
Sbjct: 231 MQDLGFRPSEFTFAAVLTAGIQMDDIEFGQ-QVHSFVVKCNFVWNVFVANALLDFYSKHD 289
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK--SKA 619
+ EA + +MP E D + L+ C +G +E E+ +L +R + + A
Sbjct: 290 RIVEARKLFYEMP-EVDGISYNVLITCCAWNGRVE---ESLELFRELQFTRFDRRQFPFA 345
Query: 620 GLVPVNAS----ELAKEKENKKLASQNLLEV---RSKVHEYRAGDTSHPETDKIYA 668
L+ + A+ E+ ++ ++ + + + EV S V Y D E ++I+A
Sbjct: 346 TLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD-KFGEANRIFA 400
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + N ++ Y + ++ A S+F +M +R + +W +I G+A++ +A ++F+ +
Sbjct: 73 VISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR 132
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
G+ PD L ++ G FES+++
Sbjct: 133 HGMVPDH----------ITLATLLSGFTEFESVNE 157
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 234/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ G+ + A V + + D T + L +A ALE+ + +H + +L
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ MY++C S+DDA+ +F + ++T+W+ M+ G A++G G++ + +F
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K G+KPD FIGV SACS G V E H SM DYGI P ++HY + D LG
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + +A IE M ME ++ L+ CR+ G+ E G R A + +L+P S A
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL----DSSAY 824
Query: 621 LVPVNASELAKEKENKKLASQNL-------------LEVRSKVHEYRAGDTSHPETDKIY 667
++ N A + + KLA + +EV++K+H + D S+ +T+ IY
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++ + +K+ GY+PET F L D+++E KE AL HSE+LAV+ GLLS+P PIR++
Sbjct: 885 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 944
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A+K I+K+ RE+++RDA RFH FKDG+CSC DYW
Sbjct: 945 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ D TF ++ +L + VH +L L ++ N ++ MY + A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+VF NM+ERDL SW+++I G A+NGL +AV +F Q + GLKPD V A S+L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+ +++ L+ KQ D T + + + CG A+ + K VH + + L + +GIL
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 559
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C M A F ++ D +W TMI+G +NG E A +FSQ + G+ PD+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ A S L + +G +H ++ + P + S+VDM G +D+A +
Sbjct: 620 TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFK 677
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
++ M ++ W ++ HG
Sbjct: 678 RIEM-MNITAWNAMLVGLAQHG 698
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA-KALEEAKAVHEHVERL- 439
+ G+ + G EA+ + L + + D T + +++A + L +K VH H ++
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 440 -LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDA 495
+S VST ++ YS M +A +F ER DL +W+ M+ G+ ++ G
Sbjct: 448 NVSDSFVST--ALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS-- 552
+ +F+ + G + DD VF C L + +G +H ++ Y + +VS
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY----DLDLWVSSG 557
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
I+DM G + A + +P+ DV W +++ C +G E
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIENGEEE 600
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
G L S DL ++ C A+ L E+ ER L N ++ MYS+
Sbjct: 43 FGFLRNAITSSDL-----MLGKCTHARIL----TFEENPERFL-------INNLISMYSK 86
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
C S+ A VF M +RDL SW++++ +A++
Sbjct: 87 CGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/121 (18%), Positives = 58/121 (47%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+++A + +L + + T S +++ C + + +++ H + ++
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +Y + + + +F M RD+ W+ M+ + + G E+A+D+ S F +GL P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 511 D 511
+
Sbjct: 246 E 246
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 236/402 (58%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ L + G E++ + Q I D ++ AC A+ +AKA+H ++
Sbjct: 223 MIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTG 282
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY++C S++ A +F M R++ +W MI + +G GE A+++F
Sbjct: 283 YSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFP 342
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G+ P+ F+ + ACS G + EG F SM +YG+ P +KHY +VD+LG
Sbjct: 343 MMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRA 402
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEALE IE MP+E D +W L+ CR+H +L+L +R A + +L +
Sbjct: 403 GRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLS 462
Query: 621 LVPVNA---SELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA ++AK ++ +K+ + +EV K++++ GD +HP +++IY +++
Sbjct: 463 NIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLK 522
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +++ AGY P+T VL+D+D+E K+ L +HSE+LA++ GLL P PIRI KNLR
Sbjct: 523 RLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLR 582
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ K +S I + +I+RDAKRFHHFK+G+CSCRDYW
Sbjct: 583 VCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++AC D K L+ + +H + ++ MY+ C ++DA +F M +RD
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEG 530
L +W MI A++G+ +++ F + + G+ PD + V AC+ LG + +
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++ S D + +M +DM G ++ A ++M + +V W ++
Sbjct: 277 YINGTGYSLDVILGTAM------IDMYAKCGSVESARWIFDRMQVR-NVITWSAMIAAYG 329
Query: 591 MHGNLELGDRCAEIVEQL 608
HG G++ E+ +
Sbjct: 330 YHGQ---GEKALELFPMM 344
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 402 EKQCISV---DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
E +C V D F + +C + L + + VH + + ++ N +L MY E
Sbjct: 42 ESECSHVLHYDTKRFRSSLLSC---RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVER 98
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+++DA +F M++R SW ++ G+AK G +F + ++G DD V
Sbjct: 99 GALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVI 158
Query: 519 SACSALGDVVEG-MLHFESMS--KDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKM 573
AC L D+ G ++H ++ DYG H+V ++VDM +++A + KM
Sbjct: 159 RACRDLKDLKCGRLIHCITLKCGLDYG------HFVCATLVDMYARCKVVEDAHQIFVKM 212
Query: 574 PMEPDVDVWEKLM 586
+ D+ W ++
Sbjct: 213 -WKRDLATWTVMI 224
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 228/371 (61%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ AC D A + K +H ++ R+ S + ++ MYS+C +++A SVF +
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEIL 413
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ DL SW +++ G+A++G + A+ F ++G KPD FIGV SAC+ G V +G+
Sbjct: 414 PQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGL 473
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F S+ + +G+ ++ HY I+D+L G EA I +MP++PD +W L+ CR+
Sbjct: 474 EYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRI 533
Query: 592 HGNLELGDRCAEIVEQLDP-------SRLNEKSKAGLVP--VNASELAKEKENKKLASQN 642
HGNLEL R A+ + +++P + N + AG+ N E + K +
Sbjct: 534 HGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMS 593
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+R +VH + GD SHP++ +I + L +MKE GY+P+T FVLHD++ E KEE L
Sbjct: 594 WIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENL 653
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LAV+ G++S+P+ PI++ KNLR C DCH+A+K IS I GR++I+RD+ RFH F
Sbjct: 654 SYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCF 713
Query: 763 KDGLCSCRDYW 773
+ G CSC+DYW
Sbjct: 714 EGGSCSCKDYW 724
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 45/254 (17%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
E +D L + +++EA+++L +EK S+ L L++ C +AL+E K VH H+ +
Sbjct: 93 EAIDILCGQSRLREAVQLLYRIEKPYASIYL----TLLKFCLKQRALKEGKQVHAHI-KT 147
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + N +L MY++C S+ DA VF M RDL SW+ MI+G+ K G E A ++F
Sbjct: 148 SGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLF 207
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK-DYG---------------I 543
+ D+ + + S C E + + M K DY
Sbjct: 208 DKMPNR----DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAA 263
Query: 544 VPSMKH-------------------YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+PS+ + S++DM G G ++EA +KM E DV W
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKME-ERDVVSWTT 322
Query: 585 LMNLCRMHGNLELG 598
+++ +G E G
Sbjct: 323 MIHTYLKNGRREEG 336
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCIS-VDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + +EA+E+ L++K S + T S + A +L K +H H+ R+
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +L MY +C S+++A +F M ERD+ SW TMI + KNG E+ +F
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + P+D F GV +AC+ L G +H + + S ++V M
Sbjct: 342 HLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAAS--ALVHMYSK 399
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A E +P +PD+ W L+ HG
Sbjct: 400 CGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHG 432
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 223/376 (59%), Gaps = 17/376 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
T S ++ AC A+ K +H +V R S Y N ++ MYS+C +D A VF
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRH-HRYESSAYFVANCLIDMYSKCGDVDTARHVF 583
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+M+++ SW +M+TG+ +G G +A+DIF + ++AG PDD F+ V ACS G V
Sbjct: 584 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 643
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ +F+SMS DYG+ P +HY +D+L +G LD+A ++ MPMEP VW L++
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR+H N+EL + + +++ N+ S + + A+ L K+ KK
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAE--NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 761
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ ++ + + GD SHP + +IYAL+ L ++K GY+PET F LHD+D+E
Sbjct: 762 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 821
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K L+ HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+++RD
Sbjct: 822 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 881
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFK+G CSC YW
Sbjct: 882 RFHHFKNGSCSCGGYW 897
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ ACG KA+ + K VH + R + V N ++ Y++C M++A VF
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ M +D+ SW+ M+ G++++G E A ++F ++ + D + V + S G
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
E + F M G +P+ +S++ S G + E
Sbjct: 391 EALNLFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGTEI 430
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR------- 444
E L L + S LP T ++ AC A + +H + ++ L L
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 450
Query: 445 --VSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ YN ++ MYS+C S A S+F + + ER++ +W MI G A+ G DA+ +F
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 510
Query: 501 QF--KQAGLKPDDQIFIGVFSACSALGDVVEG-------MLHFESMSKDYGIVPSMKHYV 551
+ + G+ P+ + AC+ L + G + H S Y + +
Sbjct: 511 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCL---- 566
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
+DM G +D A + M + + W +M MHG R +E ++ D
Sbjct: 567 --IDMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG------RGSEALDIFDKM 617
Query: 612 RLNEKSKAGLVP 623
R KAG VP
Sbjct: 618 R-----KAGFVP 624
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 13/221 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+K+G++ AI V + + D T +++ACG+ + A H + V
Sbjct: 138 IKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV 197
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MYS C S+++A +F +T+R D+ SW+++++ K+ A+D+FS+
Sbjct: 198 FICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM 257
Query: 503 ------KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVD 555
K + D + + AC +L V + +H ++ G P + +++D
Sbjct: 258 TLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALID 315
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G ++ A++ M + DV W ++ GN E
Sbjct: 316 AYAKCGLMENAVKVFNMMEFK-DVVSWNAMVAGYSQSGNFE 355
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 42/214 (19%)
Query: 405 CISVDL-PT-FSQLMQACGDAKALEEAKAVHEHV----------------------ERLL 440
CI VD+ P+ F+ L++ C A + + +H+ + E +
Sbjct: 37 CIGVDVYPSHFASLLKECKSANTVHQ---IHQQIIASGLLSLPTPLLSVSLPALPSEPFI 93
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
SP + T G++ Y C + D A V +T W+ +I K G + A+++
Sbjct: 94 SPRSLGT--GVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151
Query: 501 QFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +AG +PD V AC L G G++ + I ++ V
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNAL------VA 205
Query: 556 MLGSTGYLDEALEFIEKMPME--PDVDVWEKLMN 587
M G L+EA +++ DV W +++
Sbjct: 206 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVS 239
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 265/442 (59%), Gaps = 18/442 (4%)
Query: 347 IQNGMMASQVLNNCKHEDD----FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE 402
I+N ++A C+ +D F+ S + G + G + +A++++ +
Sbjct: 696 IENALLA--FYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMM 753
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
++ +D TF+ ++ AC LE VH R V + ++ MY++C +D
Sbjct: 754 QRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKID 813
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A F M R++ SW++MI+G+A++G G+ A+ IF++ KQ G PD F+GV SACS
Sbjct: 814 YASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACS 873
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+G V EG HF+SM + YG+ P ++H+ +VD+LG G + + +FI+ MPM+P++ +W
Sbjct: 874 HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIW 933
Query: 583 EKLMN-LCRMHG-NLELGDRCAEIVEQLDPSR------LNEKSKAG--LVPVNASELAKE 632
++ CR +G N ELG R A+++ +L+P L+ AG V + LA
Sbjct: 934 RTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMR 993
Query: 633 KEN-KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
K KK A + + ++ VH + AGD +HPE +KIY ++ L ++++AGY+PET++ L+
Sbjct: 994 KAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALY 1053
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGREL 751
D++ E KEE L HSE+LA++ +L+ + PIRIMKNLRVCGDCH+A K ISKIVGR++
Sbjct: 1054 DLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQI 1112
Query: 752 IIRDAKRFHHFKDGLCSCRDYW 773
I+RD+ RFHHF G+CSC DYW
Sbjct: 1113 ILRDSNRFHHFGGGMCSCGDYW 1134
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK----AVHEHVERL 439
GL ++ + +EA +V + K + ++ + L+ + L+E K VH ++ R
Sbjct: 426 GLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRS 484
Query: 440 -LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L R+S N ++ MY +C ++D+A SVF M +D SW++MI+G N E+AV
Sbjct: 485 GLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSC 544
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F K+ G+ P + I S+CS+LG + G
Sbjct: 545 FHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 17/229 (7%)
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD-SMDDAFSVFSNMTERDL 476
Q CG + ++ +H + +L + N ++ MYS+C S+DDA VF + R+
Sbjct: 252 QQCG-STGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNS 310
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAG----LKPDDQIFIGVFSACSALGDVVEGML 532
+W+++I+ + + G A +FS + G L+P++ + +A +L D G++
Sbjct: 311 VTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADC--GLV 368
Query: 533 HFESM---SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
E M + G + + ++V+ G +D A ++M V + ++ L
Sbjct: 369 LLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLA 428
Query: 590 RMHGNLELGDRCAEIVEQL-DPSRLNEKSKAGLVPVNASELAKEKENKK 637
R H G+ A++ +++ D +N +S L+ +E + KE K+
Sbjct: 429 RQHQ----GEEAAKVFKEMKDLVEINSESLVVLLS-TFTEFSNLKEGKR 472
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ +C L + +H + L VS N +L +Y+E DS+++ VF M E D
Sbjct: 564 LSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQ 623
Query: 477 TSWDTMITGFAK-NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----LGDVVEG 530
SW++ I AK A+ F + QAG +P+ FI + +A S+ LG +
Sbjct: 624 VSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHA 683
Query: 531 MLHFESMSKDYGI 543
++ S++ D I
Sbjct: 684 LILKYSVADDNAI 696
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y ++ A +F M +++L SW +I+G+ +N + ++A +F +GL
Sbjct: 179 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLL 238
Query: 509 PDDQIFIGVFSACSALG 525
P+ AC G
Sbjct: 239 PNHFAVGSALRACQQCG 255
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 234/409 (57%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + ++ ++V + + + + + S ++ C + AL + +H+ V +
Sbjct: 266 MIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSK-- 323
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
SPL T ++ MY +C +D A+ +F M +D+ +W+ MI+G+A++G G A+ +
Sbjct: 324 SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHL 383
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + +KPD F+ V AC+ G V G+ +F+SM K++GI HY ++D+LG
Sbjct: 384 FDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLG 443
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G LDEA+ I++MP P ++ L+ CR+H NL+L + A + LDP+ S
Sbjct: 444 RAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPT-----SA 498
Query: 619 AGLVPV--------------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
G V + ++ KE K+ + +E++S HE+R+ D HPE
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
I+ + L +MK AGY+P+ F LHD+++E KE+ LL HSE+LA++ GL+ + PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+ KNLRVCGDCH A+K IS I RE+I+RD RFHHF++G CSC DYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLL-EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G++++A ++ ++ EK +S +S ++ + LE A+ ++++V +
Sbjct: 174 ISGFAQNGQMQKAFDLFSVMPEKNGVS-----WSAMISGYVEHGDLEAAEELYKNVG--M 226
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V T +L Y + ++ A +F M ++L +W++MI G+ +N ED + +F
Sbjct: 227 KSVVVET--AMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ ++P+ V CS L + G + +SK + S++ M
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS-PLSKDTTACTSLISMYCKC 343
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G LD A + +MP + DV W +++ HG
Sbjct: 344 GDLDSAWKLFLEMPRK-DVITWNAMISGYAQHG 375
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
G K + K HE +++ P VS YN +L Y + A + F+ M +D+ SW+
Sbjct: 113 GYTKVAGKVKEAHELFDKIPEPDSVS-YNIMLVCYLRSYGVKAALAFFNKMPVKDIASWN 171
Query: 481 TMITGFAKNGLGEDAVDIFS 500
T+I+GFA+NG + A D+FS
Sbjct: 172 TLISGFAQNGQMQKAFDLFS 191
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
++++N ++ +++ M AF +FS M E++ SW MI+G+ ++G E A ++ +K
Sbjct: 167 IASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEEL---YKN 223
Query: 505 AGLK 508
G+K
Sbjct: 224 VGMK 227
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQFK 503
VS I CD ++ A +VF M+ R +W+TM++G+ K G ++A ++F +
Sbjct: 74 VSLNKTIASFVRACD-LESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP 132
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ D + + C V+ L F + V + + +++ G +
Sbjct: 133 EP-----DSVSYNIMLVCYLRSYGVKAALAFFNKMP----VKDIASWNTLISGFAQNGQM 183
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+A + MP + V W +++ HG+LE + + V + + G +
Sbjct: 184 QKAFDLFSVMPEKNGVS-WSAMISGYVEHGDLEAAEELYKNV-GMKSVVVETAMLTGYMK 241
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEY 653
ELA E+ +++A +NL+ S + Y
Sbjct: 242 FGKVELA-ERIFQRMAVKNLVTWNSMIAGY 270
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 238/414 (57%), Gaps = 11/414 (2%)
Query: 369 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
A + + + G L L G V+ GK +EA V ++ + D+ T L+ AC AL+
Sbjct: 369 AVKDTISYGAL--LSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQH 426
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
K H V L S N ++ MY++C +D + VF M RD+ SW+TMI G+
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
+GLG++A +F K G PDD FI + +ACS G V EG F++M+ YGI+P M+
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
HY+ +VD+L G LDEA +FI+ MP++ DV VW L+ CR+H N++LG + + I+++L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606
Query: 609 DPSRL-------NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTS 659
P N S AG + K K KK + +E+ +H + GD S
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQS 666
Query: 660 HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP 719
HP + IY + + +K+ GY +T FVL D+++E KE+ALL HSE+LA++ G+LS
Sbjct: 667 HPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLN 726
Query: 720 ARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I + KNLRVCGDCH+A+K ++ + R +I+RD RFHHFK+G CSC ++W
Sbjct: 727 EDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 382 LDGLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V ++ EA + L+E C + + + ++ C L +H + +
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCF-LSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
++ N +L MY++ +++A F + +D S+ +++G +NG E+A +F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + ++PD + + ACS L + G H + + + S+ + S++DM
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN--SLIDMYA 454
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + +KMP DV W ++ +HG
Sbjct: 455 KCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG 488
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF +++AC L + +H H L + L VST ++ +Y C A +VF+
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVST--ALIDLYIRCARFGPARNVFA 159
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAV-DIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M RD+ +W+ M+ G+A +G+ A+ + GL+P+ + + + G +
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219
Query: 529 EGMLHFESMSKDYGIVPSMKHY-------VSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+G + Y + ++ +++DM L A MP+ DV
Sbjct: 220 QG-----TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-T 273
Query: 582 WEKLMNLCRMHGNLELGDRCAE 603
W L+ G L DR E
Sbjct: 274 WSALI------GGFVLCDRMTE 289
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL---SPLRVSTYNGILKMYSECDSMDDAFSVF 468
T L+ AL + ++H + R + +V +L MY++C + A VF
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSACSALGDV 527
M R+ +W +I GF +A ++F GL + C++L D+
Sbjct: 264 HGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL 323
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ GI + S++ M G ++EA F +++ ++ D + L++
Sbjct: 324 HMGT-QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLS 381
Query: 588 LCRMHGNLE 596
C +G E
Sbjct: 382 GCVQNGKAE 390
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 214/373 (57%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS-- 469
T ++ AC LE + +HE R+ S + MY++C S+ DA + F
Sbjct: 270 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 329
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
N E++L +W+TMIT +A G G AV F + QAG++PDD F G+ S CS G V
Sbjct: 330 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDV 389
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ +F MS Y I P ++HY + D+LG G L EA + + +MPM +W L+ C
Sbjct: 390 GLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAAC 449
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPV--NASELAKEKENKKLAS 640
R H NLE+ + A + L+P N ++AG + K + KK
Sbjct: 450 RKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPG 509
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ K H + GDTSHP+ +IY + L +MK AGY P+T +VLHDI +E KE
Sbjct: 510 CSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEF 569
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L+AHSE+LAV+ G+L++PA +R+ KNLR+CGDCH+A+ IS+I GRE+I+RD RFH
Sbjct: 570 NLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFH 629
Query: 761 HFKDGLCSCRDYW 773
HFK G CSC DYW
Sbjct: 630 HFKGGCCSCGDYW 642
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++++ + ++ K VH + R+ + ++ +Y +C ++DA VF
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
NMT RD++SW+ ++ G+ K+G + A+ IF + + + + S S G
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVS----WTTMISGYSQSGLAQ 248
Query: 529 EGMLHFESMSK-DYGIVPSMKHYVSIVDMLGSTGYLD 564
+ + F+ M K D G+ P ++V+I+ +L + L
Sbjct: 249 QALSLFDEMVKEDSGVRP---NWVTIMSVLPACAQLS 282
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 244/442 (55%), Gaps = 19/442 (4%)
Query: 347 IQNGMMASQVLNNCKHE-----DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
+ NG++ C +E D E + +S N+ + G VKE K+ EA++V +
Sbjct: 67 VNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNS----LISGFVKEDKLGEALDVFRRM 122
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
+++ + T + ++ C AL K +H + + V N ++ MY +C +
Sbjct: 123 QREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVV 182
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
D +F M +DLTSW+TM+TG+A NG A+D+F++ G++PDD FI + S C
Sbjct: 183 DYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGC 242
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
S G +G F M D+G+ PS++HY +VDMLG G +D AL ++ MPM+ +
Sbjct: 243 SHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSI 302
Query: 582 WEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEKSKAGLV-PVN-ASELAKE 632
W L+N CR+H + L + A + +L+P N + AG+ VN E+ +
Sbjct: 303 WGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQT 362
Query: 633 KENKKLASQNLLEVRSKVHEYRA-GDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
+ +K A + ++V++K+H + A G +D+ + LR M+E GYIP T VLH
Sbjct: 363 RRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLH 422
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGREL 751
D+++E K + HSERLA L+ + A PIRI KNLRVC DCHS +KI+S++ GR +
Sbjct: 423 DVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVI 482
Query: 752 IIRDAKRFHHFKDGLCSCRDYW 773
++RD RFHHFK+G CSC DYW
Sbjct: 483 VLRDTNRFHHFKEGACSCNDYW 504
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G K G ++EA+ V + C+ FS ++AC D + L + VH V +
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQF 502
NG+L++Y++C+ ++ VF M ER++ SW+++I+GF K + LGE A+D+F +
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGE-ALDVFRRM 122
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G+ + C+ + ++ G +H + + P + S+VDM G
Sbjct: 123 QREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARR--PDVLVLNSLVDMYVKCG 180
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+D + M D+ W ++
Sbjct: 181 VVDYGRRLFDGMR-SKDLTSWNTMLT 205
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 238/404 (58%), Gaps = 14/404 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQC-----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
LV+ ++E+ E+ + + C ++ + TF L+ AC AL E + +H V
Sbjct: 249 ALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAE 308
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ Y C ++ DA VF M RD+ SW +MI+ FA+ G ++A+++
Sbjct: 309 RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMEL 368
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G PDD IFI V ACS G V F S+ D + P+++HY +VD+LG
Sbjct: 369 YHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLG 428
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------R 612
G L +A + + MP P ++ +++ C+++ ++E G+ AE+V +LDP
Sbjct: 429 RAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYIT 488
Query: 613 LNEKSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L A P +A+ + K E+ KK + +EV +VHE+ AGD HP+ D+IYA
Sbjct: 489 LANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAE 548
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
I+ L QMKEAGY +T+ VL D++++ KE L HSE+LA++ GL+S+P AP+RI+KN
Sbjct: 549 IQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKN 608
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+A K+ISK+ GRE+++RD RFHHF++G+CSC DYW
Sbjct: 609 LRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ-----AGLKPDDQIFIGVFSAC 521
+F M ERDL SW TM+ +N L E++ ++F + + G+ P+ FI + AC
Sbjct: 231 IFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDAC 290
Query: 522 SALGDVVEG---------------MLHFESMSKDYG----------IVPSMKH-----YV 551
S LG + EG ++ ++ YG + M+ +
Sbjct: 291 SFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWS 350
Query: 552 SIVDMLGSTGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNLEL-GDRCAEIV-- 605
S++ G +DEA+E +M E PD ++ ++ C G +E GD IV
Sbjct: 351 SMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGD 410
Query: 606 EQLDPS 611
Q++P+
Sbjct: 411 TQVEPT 416
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
L +++ L+ A + EEAK + + + ER L + +L + + +++DA F
Sbjct: 54 LGSWTALLSAFALSGHHEEAKTLFDTMQERDLI-----AWTIMLTVLATFSNIEDAKYHF 108
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF--IGVFSACSALGD 526
M ERDL +W M+ A+ G E+A + F Q P+ +F + SA GD
Sbjct: 109 DQMPERDLVAWTAMLAANAERGQMENARETFDQM------PERNLFSWTSLLSAYGRSGD 162
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V F+SM ++ +V + +++ +G + A + MP E D+ W ++
Sbjct: 163 VKAAGRVFDSM-PEWNLVA----WTAMLTGYSLSGDVVRAKRAFDSMP-ERDLIAWTAML 216
Query: 587 NLCRMHGNL 595
+ +G+L
Sbjct: 217 SAYAFNGHL 225
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ +L +Y+ + +A VF M L SW +++ FA +G E+A +F ++
Sbjct: 25 SWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERD 84
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST---GYL 563
L + + + + ++ + HF+ M + + V+ ML + G +
Sbjct: 85 LIA----WTIMLTVLATFSNIEDAKYHFDQMPE--------RDLVAWTAMLAANAERGQM 132
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
+ A E ++MP E ++ W L++ G+++ R
Sbjct: 133 ENARETFDQMP-ERNLFSWTSLLSAYGRSGDVKAAGRV 169
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 237/407 (58%), Gaps = 18/407 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--R 438
+DG + GK EA+++ + + D T ++ A +E K +H +V+ R
Sbjct: 222 MIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSR 281
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ L V ++ MY +C S++DA +VF + +D+ W+ MI G+A +G A+++
Sbjct: 282 CVQ-LNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEM 340
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q + GL P D FIG+ +ACS G V EG F+SM +YGI P ++HY +VD+LG
Sbjct: 341 FVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLG 400
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G ++EA ++ + + PD +W L+ CR+H N+ LG R A+ L + L
Sbjct: 401 RAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADF---LVANGLANSGM 457
Query: 619 AGLVPVNASELAKEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKI 666
L+ + + K +E ++ S + +E+ KV+E+ AGD SHP TD+I
Sbjct: 458 YILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEI 517
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
YA++ + A +KE G++P+T VLHD+D+ KE+AL HSE+LAV+ GL+SS + I+I
Sbjct: 518 YAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKI 577
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLR C DCH+ LK+ISKI R+++ RD RFHHF DG C+C DYW
Sbjct: 578 VKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + +L Y+ ++DDA +F + +D W+ MI G+ ++G +A+ +F + +
Sbjct: 185 VVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR 244
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+ +PD+ + V SA + LG V G + + +++ ++VDM G L+
Sbjct: 245 SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLE 304
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+A+ + D+ VW ++N MHG+
Sbjct: 305 DAVAVFHGIG-NKDIVVWNAMINGYAMHGD 333
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 232/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G ++A+++ ++ + F+ + AC ALE + +H + L
Sbjct: 396 MISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLG 455
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MY+ C ++ A ++F M D SW++MI ++G G A++++
Sbjct: 456 HDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYE 515
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + G+ PD + F+ V SACS G V EG +F SM ++YGI P HY ++D+
Sbjct: 516 QMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRA 575
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-----LNE 615
G +A I+ MP E +WE L+ CR HGN++LG AE + +L P L
Sbjct: 576 GKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLS 635
Query: 616 KSKAGLVPVN----ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
A L N +L +++ KK + + EV +KVH + DT HPE IY +
Sbjct: 636 NMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLE 695
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +MK+ GYIP+T++VLHD++ E KE AL HSE+LAV+ GL+ P A +R+ KNLR
Sbjct: 696 KLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLR 755
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A+K +SK+VGRE+++RD KRFHHFK+G CSCR+YW
Sbjct: 756 ICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 327 SRRQYQQNPNEGQY---QSYSGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQ 381
+R+ + + P ++ +G ++NG + A ++L+ + A +
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNA----------M 260
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--- 438
+ G + G ++A+ + + + VD T++ ++ AC D K VH ++ +
Sbjct: 261 ISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNEL 320
Query: 439 ------LLS-------------------------PLR-VSTYNGILKMYSECDSMDDAFS 466
LLS P++ + T+N +L Y M++A S
Sbjct: 321 NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKS 380
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
F+ M E++L +W MI+G A+NG GE A+ +F+Q K G +P+D F G +ACS LG
Sbjct: 381 FFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGA 440
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G LH + + + S+ + +++ M G ++ A MP V W +
Sbjct: 441 LENGRQLHAQIVHLGHDSTLSVGN--AMITMYARCGIVEAARTMFLTMPFVDPVS-WNSM 497
Query: 586 MNLCRMHGNLELGDRCAEIVEQ-----LDPSR------LNEKSKAGLV 622
+ HG+ G + E+ EQ + P R L+ S AGLV
Sbjct: 498 IAALGQHGH---GVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLV 542
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 451 ILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ YS ++ A +F + + RD ++ MITG++ G A+++F + A +
Sbjct: 85 LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQ 144
Query: 509 PDDQIFIGVFSACSAL 524
PDD F V SA + +
Sbjct: 145 PDDFTFASVLSASTLI 160
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 240/421 (57%), Gaps = 25/421 (5%)
Query: 369 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
A + + + G L L G V+ GK +EA V ++ + D+ T L+ AC AL+
Sbjct: 369 AVKDTISYGAL--LSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQH 426
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
K H V L S N ++ MY++C +D + VF M RD+ SW+TMI G+
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
+GLG++A +F K G PDD FI + +ACS G V EG F++M+ YGI+P M+
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
HY+ +VD+L G LDEA +FI+ MP++ DV VW L+ CR+H N++LG + + I+++L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606
Query: 609 DPS----------------RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHE 652
P R +E ++ ++ K K KK + +E+ +H
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRII-------QKVKGFKKSPGYSWIEINGSLHA 659
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ GD SHP + IY + + +K+ GY +T FVL D+++E KE+ALL HSE+LA++
Sbjct: 660 FVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIA 719
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
G+LS I + KNLRVCGDCH+A+K ++ + R +I+RD RFHHFK+G CSC ++
Sbjct: 720 FGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNF 779
Query: 773 W 773
W
Sbjct: 780 W 780
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 382 LDGLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V ++ EA + L+E C + + + ++ C L +H + +
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCF-LSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
++ N +L MY++ +++A F + +D S+ +++G +NG E+A +F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + ++PD + + ACS L + G H + + + S+ + S++DM
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN--SLIDMYA 454
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + +KMP DV W ++ +HG
Sbjct: 455 KCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG 488
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 24/202 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF +++AC L + +H H L + L VST ++ +Y C A +VF+
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVST--ALIDLYIRCARFGPARNVFA 159
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVD-IFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M RD+ +W+ M+ G+A +G+ A+ + GL+P+ + + + G +
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219
Query: 529 EGMLHFESMSKDYGIVPSMKHY-------VSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+G + Y + ++ +++DM L A MP+ DV
Sbjct: 220 QG-----TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDV-T 273
Query: 582 WEKLMNLCRMHGNLELGDRCAE 603
W L+ G L DR E
Sbjct: 274 WSALI------GGFVLCDRMTE 289
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL---SPLRVSTYNGILKMYSECDSMDDAFSVF 468
T L+ AL + ++H + R + +V +L MY++C + A VF
Sbjct: 204 TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVF 263
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSACSALGDV 527
M R+ +W +I GF +A ++F GL + C++L D+
Sbjct: 264 HGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADL 323
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ GI + S++ M G ++EA F +++ ++ D + L++
Sbjct: 324 HMGT-QLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLS 381
Query: 588 LCRMHGNLE 596
C +G E
Sbjct: 382 GCVQNGKAE 390
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 242/434 (55%), Gaps = 27/434 (6%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A ++ N DD A + + G V+ G+ + A+ + + D T
Sbjct: 1163 ARRIFNEIPSPDDVAWTT----------MISGCVENGQEEHALFTYHHMRLSKVQPDEYT 1212
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ L++AC ALE+ + +H + +L ++ MY++C +++DA +F
Sbjct: 1213 FATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTN 1272
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+ SW+ MI G A++G E+A+ F + K G+ PD FIGV SACS G V E
Sbjct: 1273 TSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYE 1332
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+F SM K YGI P ++HY +VD L G + EA + I MP E ++ L+N CR+
Sbjct: 1333 NFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQ 1392
Query: 593 GNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKEN-------------KKLA 639
+ E G R AE + L+PS S A ++ N A + EN KK
Sbjct: 1393 VDRETGKRVAEKLLALEPS----DSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDP 1448
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +++++KVH + AGD SH ETD IY + + +++E GY+P+T F L D+++E KE
Sbjct: 1449 GFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKE 1508
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
+L HSE+LA+++GL+ +P +R++KNLRVCGDCH+A+K ISK+ RE+++RDA RF
Sbjct: 1509 CSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRF 1568
Query: 760 HHFKDGLCSCRDYW 773
HHF+ G+CSC DYW
Sbjct: 1569 HHFRSGVCSCGDYW 1582
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ L ++ G+ EA++ + ++ D TF ++ LE K +H V R
Sbjct: 876 KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ MY + S+ A +VF M E DL SW+TMI+G A +GL E +V +F
Sbjct: 936 GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMF 995
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ GL PD V ACS+LG + + G+V +++D+
Sbjct: 996 VDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK 1055
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+G ++EA EF+ D+ W + MHG + GD
Sbjct: 1056 SGKMEEA-EFLFVNQDGFDLASWNAM-----MHGYIVSGD 1089
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +A+ + L+++ + T + +A G L++ K + V +
Sbjct: 1080 MMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRG 1139
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + +G+L MY +C M+ A +F+ + D +W TMI+G +NG E A+ +
Sbjct: 1140 FNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYH 1199
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + ++PD+ F + ACS L + +G +H ++ + P + S+VDM
Sbjct: 1200 HMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAK 1257
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +++A ++ + W ++ HGN E
Sbjct: 1258 CGNIEDARGLFKRTNTS-RIASWNAMIVGLAQHGNAE 1293
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 69/143 (48%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K ++ + LL + +S T + + + C + + A+++H + ++ V
Sbjct: 707 KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAG 766
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y++ + +A +F M RD+ W+ M+ + GL +A+ +FS+F + GL+P
Sbjct: 767 ALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP 826
Query: 510 DDQIFIGVFSACSALGDVVEGML 532
DD + + +V+E L
Sbjct: 827 DDVTLCTLARVVKSKQNVLEWQL 849
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 65/146 (44%), Gaps = 2/146 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +YS+ M++A +F N DL SW+ M+ G+ +G A+ ++ +++G + +
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
A L + +G +++ G + ++DM G ++ A
Sbjct: 1109 QITLANAAKAAGGLVGLKQGK-QIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIF 1167
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLE 596
++P PD W +++ C +G E
Sbjct: 1168 NEIP-SPDDVAWTTMISGCVENGQEE 1192
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 236/397 (59%), Gaps = 11/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G+ K+A+++ ++ + ++ + T S ++ AC A + KAVH + V
Sbjct: 342 VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY+ C S+DD VF+ + ++ L SW T+I +A++G ++ F + Q
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE 461
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
GL DD + SACS G + EG+ F SM D+G+ P +H++ +VD+L G L+
Sbjct: 462 GLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A I MP PD W L++ C++H + + R A+ + +L+ +E S L+
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE--DEHSTVTLLSNV 579
Query: 626 ASEL-----AKEKENKKLASQN----LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+E ++ N++ A +N +E+ VHE+ AGD SHPE + I A I+ L Q
Sbjct: 580 YAEAGRWDDVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQ 639
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MK+AGY+P+ R VLH++ +E KE+ L HSE+LA+++GL+S+P P+ I+KNLR C DC
Sbjct: 640 MKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDC 699
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K IS+IVGR++++RD+ RFHHF++G CSC+DYW
Sbjct: 700 HAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 1/146 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K+G +A+E+ + ++ TF L+ AC + + LE+ +A+H V
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294
Query: 441 SPLRVSTYNGILKMYSECDS-MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N +L MY++C S +++A VF M RD+ +W+ +I + + G +DA+DIF
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALG 525
Q + + P++ V SAC+ LG
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLG 380
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TFS + AC + + + + N ++ MYS+C S++ A VF
Sbjct: 162 DAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVF 221
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ RD+ +W+TMI+G+AK G A+++F + KP+ FIG+ +AC+ L D+
Sbjct: 222 DRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLE 281
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLG-STGYLDEALEFIEKMPMEPDVDVWEKLM 586
+G + +D G + +++M + L+EA + E+M DV W L+
Sbjct: 282 QGRAIHRKVRED-GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILI 338
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSP 442
+ G +EA+ + + + D F + C +K L++ + +H + E L
Sbjct: 32 AFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLE 91
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ ++ MY+ C ++ A F M ++ L +W+ +I G+++NG A+ I+
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 503 KQA---GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
G+KPD F AC+ +GD+ +G E+ + G ++++M
Sbjct: 152 VSKSPEGMKPDAITFSSALYACTVVGDISQGR-EIEARTVASGYASDSIVQNALINMYSK 210
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L+ A + +++ DV W +++
Sbjct: 211 CGSLESARKVFDRLK-NRDVIAWNTMIS 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY +C S+ DA +VF + + SW ++ FA+NG +A+ + + GL+PD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 514 FIGVFSACSALGDVVEGML 532
F+ CS+ D+ +G L
Sbjct: 61 FVVAIGVCSSSKDLKQGQL 79
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 222/371 (59%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+ AC AL E + +H V + N ++ Y C S+ DA VF M
Sbjct: 115 TFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGM 174
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW +MI+ FA+ G ++A++++ + G PDD IFI V ACS G V
Sbjct: 175 RRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASG 234
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F S+ D + P+++HY +VD+LG G L +A + + MP P ++ +++ C++
Sbjct: 235 DFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKL 294
Query: 592 HGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVNASELAK---EKENKKLASQN 642
+ ++E G+ AE+V +LDP L A P +A+ + K E+ KK +
Sbjct: 295 YTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCS 354
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV +VHE+ AGD HP+ D+IYA I+ L QMKEAGY +T+ VL D++++ KE L
Sbjct: 355 WIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLL 414
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+P AP+RI+KNLRVC DCH+A K+ISK+ GRE+++RD RFHHF
Sbjct: 415 WYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHF 474
Query: 763 KDGLCSCRDYW 773
DG+CSC DYW
Sbjct: 475 LDGMCSCNDYW 485
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 38/238 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ +LEE + VH V + V ++ MY +C S+++A + F +
Sbjct: 12 TYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKI 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA--GLKPDDQIFIGVFSACSALGDVVE 529
+ ++ SW M+ +A+NG A++++ + A G+ P+ FI + ACS LG + E
Sbjct: 72 SRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAE 131
Query: 530 G---------------MLHFESMSKDYG----------IVPSMKH-----YVSIVDMLGS 559
G ++ ++ YG + M+ + S++
Sbjct: 132 GRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQ 191
Query: 560 TGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNLEL-GDRCAEIV--EQLDPS 611
G +DEA+E +M E PD ++ ++ C G +E GD IV Q++P+
Sbjct: 192 RGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPT 249
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 222/371 (59%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ C AL+ K H ++++ + V ++ MY++C + A +FS
Sbjct: 335 TMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEA 394
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ +W+ M+ G+ +G GE A+ +F++ + G+KP+D FIG ACS G VVEG
Sbjct: 395 IDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
FE M D+G+VP ++HY +VD+LG G LDEA + IE MP+ P++ +W ++ C++
Sbjct: 455 GLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKI 514
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS---------ELAKEKENKKLASQN 642
H N +G+ A + L+P K + A+ + K+ KK +
Sbjct: 515 HKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMS 574
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV VH+++ GDT+HP +KI ++ + ++KEAGY+P+T VLH+ID+E KE AL
Sbjct: 575 SIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETAL 634
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+ PIR++KNLR+C DCH+ K++SKI R +I+RD RFHHF
Sbjct: 635 NYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHF 694
Query: 763 KDGLCSCRDYW 773
++G CSC YW
Sbjct: 695 REGSCSCGGYW 705
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ +CG A++ K +H ++ R + ++ ++ MY +C + A ++F +M
Sbjct: 234 TMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSM 293
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ +W MI+ +A+ + A +F Q + G++P++ + + S C+ G + G
Sbjct: 294 KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK 353
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F + G+ + +++DM G + A + ++ D+ W +M M
Sbjct: 354 W-FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGM 411
Query: 592 HG 593
HG
Sbjct: 412 HG 413
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRV 445
E + A+ + K I VD +++AC K +H + L+S + V
Sbjct: 87 ESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT-------GFAKNGLG------ 492
N +++MYSEC S+ A +F M+ERD+ SW TMI GF++ +
Sbjct: 147 --VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMI 204
Query: 493 ---------EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
E+ +F + + + P+D + + +C +G V G LH + +G
Sbjct: 205 AGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFG 264
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ S+ ++VDM G G + A + M DV W +++
Sbjct: 265 M--SLALATALVDMYGKCGEIRSARAIFDSMK-NKDVMTWTAMIS 306
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 246/429 (57%), Gaps = 14/429 (3%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
L N K + R + G V+ G +A+E+ L+ + + T + +
Sbjct: 356 LGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAM 415
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT-ERD 475
+ LE K +H + S N ++ MY++ +++ A VF +++
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKE 475
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ SW +MI A++GLG++A+++F + G+KPD ++GV SAC+ +G V +G ++
Sbjct: 476 IVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN 535
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M++ + I P++ HY ++D+ G G L EA FIE MP+EPD W L+ C++H N
Sbjct: 536 MMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNA 595
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPV--------NASE---LAKEKENKKLASQNLL 644
+L AE + +DP N + L V NA++ L K++ +K + +
Sbjct: 596 DLAKVAAERLLLIDPG--NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
++++VH + D HP+ D+IY L+ + ++K+ G+IP+T VLHD+++E KE+ L
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GLL++P +RIMKNLRVC DCHSA+K ISK+VGRE+I+RDA RFHHFKD
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 765 GLCSCRDYW 773
G CSCRDYW
Sbjct: 774 GSCSCRDYW 782
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+ + LGL C+ V + + CGD AK V + ++ +ST+N
Sbjct: 163 KIHSFVVKLGL--GSCVPVA-TSLLNMYAKCGDPVI---AKVVFDR----MTVKNISTWN 212
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLK 508
++ +Y + + A S F M +RD+ SW++MI+G+++ G +A+ IFS+ + LK
Sbjct: 213 ALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLK 272
Query: 509 PDDQIFIGVFSACSAL 524
PD+ + SAC+ L
Sbjct: 273 PDNFTLASILSACANL 288
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+ + +E A+ + EH S L + + +L Y++ ++ A +F+ + +RD
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRT--SNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHF 534
+ +W MI G+ +NGL DA+++F G +P+ + S S+L + G +H
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHA 433
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
++ PS+ + +++ M TG ++ A + + ++ W ++ HG
Sbjct: 434 SAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG- 490
Query: 595 LELGDRCAEIVEQL 608
LG + E++
Sbjct: 491 --LGKEAINLFERM 502
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ ++Q K ++VH + + L V N ++ Y++ S+ A VF M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 473 ERDLTSWDTMITGFAKN-------------------------------GLGEDAVDIFSQ 501
+ SW+T+I+G+AK GL ++A+ +F++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ P V S+C+A ++ S G+ + S+++M G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAA-NQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
A ++M ++ ++ W L++L G EL
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELA 227
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 243/406 (59%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +EA+EV + + + ++ TF + A + +++ K +H V +
Sbjct: 518 MVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG 577
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ +Y +C S++DA F M+ER+ SW+T+IT +++G G +A+D+F
Sbjct: 578 CTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFD 637
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q KQ GLKP+D FIGV +ACS +G V EG+ +F+SMS ++GI P HY +VD+LG
Sbjct: 638 QMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRA 697
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD A +F+E+MP+ + VW L++ CR+H N+E+G+ A+ + +L+P S +
Sbjct: 698 GQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEP----HDSASY 753
Query: 621 LVPVNA-------------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
++ NA ++ K++ +K ++ +EV++ VH + GD HP +IY
Sbjct: 754 VLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIY 813
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L ++ + GYI F+ H+ ++E K+ HSE+LAV+ GL+S P P+R++
Sbjct: 814 KYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVI 873
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+ +K S+++GRE+++RD RFHHF +G CSC D+W
Sbjct: 874 KNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ KEA+E ++ I D + + AC KA+ + + +H V
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS +N ++ +Y+ C +AFS+F + +D +W+ M++GFA++GL E+A+++F
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ QAG+K + F+ SA + L D+ +G ++ K G + +++ + G
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKC 595
Query: 561 GYLDEA-LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +++A ++F E E + W ++ C HG
Sbjct: 596 GSIEDAKMQFFEM--SERNHVSWNTIITSCSQHG 627
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT---FSQLMQACGDAKALEEAKA 431
N + L G + G +EA+ GL + S +PT S ++ AC A E+ +
Sbjct: 108 NVSWVAMLSGYARNGLGEEAV---GLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRL 164
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
VH V + S N ++ +Y S+ A VFS M D +++T+I+ A+ G
Sbjct: 165 VHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGN 224
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
GE A++IF + + +G PD + +AC+++GD+ +G S G+ P
Sbjct: 225 GESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGK-QLHSYLLKAGMSPDYIIEG 283
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
S++D+ G + EALE I K +V +W ++
Sbjct: 284 SLLDLYVKCGVIVEALE-IFKSGDRTNVVLWNLML 317
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVST 447
G + A+E+ + + D T + L+ AC L + K +H ++ + +SP +
Sbjct: 223 GNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYI-I 281
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+L +Y +C + +A +F + ++ W+ M+ + + + D+F Q AG+
Sbjct: 282 EGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGV 341
Query: 508 KPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLD 564
+P++ + + C+ G++ G +H S+ + YVS ++DM G+LD
Sbjct: 342 RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF----ESDMYVSGVLIDMYSKYGWLD 397
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+A +E + + DV W ++
Sbjct: 398 KARRILEVLEAK-DVVSWTSMI 418
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y++ + A VF ++ RD SW M++G+A+NGLGE+AV ++ Q +G+
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 509 PDDQIFIGVFSAC------------------------SALGDVVEGM-LHFESMSKDYGI 543
P + V SAC + +G+ + + L F S+S +
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 544 VPSMKH-----YVSIVDMLGSTGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNL 595
M + + +++ G + ALE E+M + PD L+ C G+L
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 596 ELGDRCAEIVEQ--------LDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEV 646
G + + + ++ S L+ K G++ V A E+ K + + NL+ V
Sbjct: 261 NKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVI-VEALEIFKSGDRTNVVLWNLMLV 318
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MYS+ +D A + + +D+ SW +MI G+ ++ ++A++ F + G+ PD
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445
Query: 511 DQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ SAC+ + G + ++ S D I + ++V++ G E
Sbjct: 446 NIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI------WNALVNLYARCGRSKE 499
Query: 566 ALEFIEKM 573
A E +
Sbjct: 500 AFSLFEAI 507
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 236/397 (59%), Gaps = 11/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G+ K+A+++ ++ + ++ + T S ++ AC A + KAVH + V
Sbjct: 342 VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY+ C S+DD VF+ + ++ L SW T+I +A++G ++ F + Q
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE 461
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
GL DD + SACS G + EG+ F SM D+G+ P +H++ +VD+L G L+
Sbjct: 462 GLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEA 521
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A I MP PD W L++ C++H + + R A+ + +L+ +E S L+
Sbjct: 522 AENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE--DEHSTVTLLSNV 579
Query: 626 ASEL-----AKEKENKKLASQN----LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+E ++ N++ A +N +E+ VHE+ AGD SHPE + I A I+ L Q
Sbjct: 580 YAEAGRWDDVRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQ 639
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MK+AGY+P+ R VLH++ +E KE+ L HSE+LA+++GL+S+P P+ I+KNLR C DC
Sbjct: 640 MKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDC 699
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K IS+IVGR++++RD+ RFHHF++G CSC+DYW
Sbjct: 700 HAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K+G +A+E+ + ++ TF L+ AC + + LE+ +A+H V+
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294
Query: 441 SPLRVSTYNGILKMYSECDS-MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N +L MY++C S +++A VF + RD+ +W+ +I + + G +DA+DIF
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALG 525
Q + + P++ V SAC+ LG
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLG 380
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TFS + AC + + + + N ++ MYS+C S++ A VF
Sbjct: 162 DAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVF 221
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ RD+ +W+TMI+G+AK G A+++F + KP+ FIG+ +AC+ L D+
Sbjct: 222 DRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLE 281
Query: 529 EG 530
+G
Sbjct: 282 QG 283
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSP 442
+ G +EA+ + + + D F + C +K L++ + +H + E L
Sbjct: 32 AFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLE 91
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ ++ MY+ C ++ A F M ++ L +W+ +I G+++NG A+ I+
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 503 KQA---GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
G+KPD F ACS +GD+ +G E+ + G ++++M
Sbjct: 152 VSKSPEGMKPDAITFSSALYACSVVGDISQGR-EIEARTVASGYASDSIVQNALINMYSK 210
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L+ A + +++ DV W +++
Sbjct: 211 CGSLESARKVFDRLK-NRDVIAWNTMIS 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY +C S+ DA +VF + + SW ++ FA+NG +A+ + + GL+PD +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 514 FIGVFSACSALGDVVEGML 532
F+ CS+ D+ +G L
Sbjct: 61 FVVAIGVCSSSKDLKQGQL 79
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 246/429 (57%), Gaps = 14/429 (3%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
L N K + R + G V+ G +A+E+ L+ + + T + +
Sbjct: 356 LGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAM 415
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT-ERD 475
+ LE K +H + S N ++ MY++ +++ A VF +++
Sbjct: 416 LSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKE 475
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ SW +MI A++GLG++A+++F + G+KPD ++GV SAC+ +G V +G ++
Sbjct: 476 IVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN 535
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M++ + I P++ HY ++D+ G G L EA FIE MP+EPD W L+ C++H N
Sbjct: 536 MMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNA 595
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPV--------NASE---LAKEKENKKLASQNLL 644
+L AE + +DP N + L V NA++ L K++ +K + +
Sbjct: 596 DLAKVAAERLLLIDPG--NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWI 653
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
++++VH + D HP+ D+IY L+ + ++K+ G+IP+T VLHD+++E KE+ L
Sbjct: 654 HIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKY 713
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GLL++P +RIMKNLRVC DCHSA+K ISK+VGRE+I+RDA RFHHFKD
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773
Query: 765 GLCSCRDYW 773
G CSCRDYW
Sbjct: 774 GSCSCRDYW 782
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+ + LGL C+ V + + CGD AK V + ++ +ST+N
Sbjct: 163 KIHSFVVKLGL--GSCVPVA-TSLLNMYAKCGDPVI---AKVVFDR----MTVKNISTWN 212
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLK 508
++ +Y + + A S F M +RD+ SW++MI+G+++ G +A+ IFS+ + LK
Sbjct: 213 ALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLK 272
Query: 509 PDDQIFIGVFSACSAL 524
PD+ + SAC+ L
Sbjct: 273 PDNFTLASILSACANL 288
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--- 436
+ G ++G EA+ + +L + + D T + ++ AC + + L K +H ++
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 437 ------------------------ERLL------SPLRVSTYNGILKMYSECDSMDDAFS 466
RL+ S L + + +L Y++ ++ A
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F+ + +RD+ +W MI G+ +NGL DA+++F G +P+ + S S+L
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G +H ++ PS+ + +++ M TG ++ A + + ++ W +
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSM 482
Query: 586 MNLCRMHGNLELGDRCAEIVEQL 608
+ HG LG + E++
Sbjct: 483 IMALAQHG---LGKEAINLFERM 502
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 33/217 (15%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ ++Q K ++VH + + L V N ++ Y++ S+ A VF M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 473 ERDLTSWDTMITGFAKN-------------------------------GLGEDAVDIFSQ 501
+ SW+T+I+G+AK GL ++A+ +F++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ P V S+C+A ++ S G+ + S+++M G
Sbjct: 133 MISERVPPSQFTVSNVLSSCAA-NQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
A ++M ++ ++ W L++L G EL
Sbjct: 192 DPVIAKVVFDRMTVK-NISTWNALISLYMQSGQFELA 227
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/403 (39%), Positives = 236/403 (58%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + EA+ + L+ + + T ++ +C AL+ K +HE+V++
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MY++C S+DDA VF NM RD +W MI +A +G G AV +F
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++AG +PD+ F+G+ ACS G V EG +F M YG++P +KHY +VD+LG
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRA 372
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G L+EA EFI +P+ P +W L++ C HGN+ELG R E + +LD S
Sbjct: 373 GRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILS 432
Query: 614 NEKSKAG-LVPVN-ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N ++AG VN +L E+ K+ + +EV + VHE+ +GD H + K++ +
Sbjct: 433 NLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALD 492
Query: 672 GLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++K GY+P T V H D++ E KE L HSE+LA++ GLL++P IR++KNL
Sbjct: 493 ELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNL 552
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCHSA K+IS I R++I+RD +RFHHFKDG CSC DYW
Sbjct: 553 RVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC KALEE + +H +L V ++ MY+ C+ MD A VF +
Sbjct: 123 TFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI 182
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E + +++ MITG+A+ +A+ +F + + LKP D + V S+C+ LG + G
Sbjct: 183 WEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGK 242
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
E + K+ G +K +++DM G LD+A+ E M + D W ++ +
Sbjct: 243 WMHEYVKKN-GFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVR-DTQAWSAMIMAYAI 300
Query: 592 HGN 594
HG+
Sbjct: 301 HGH 303
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 416 LMQACGDAKALEE--AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L+ C + L++ A A+ H+ LS L + + + SM A +F + +
Sbjct: 26 LLPKCTSLRELKQLQAFAIKTHLHSDLSVL--TKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
D+ ++TM G+A+ A +F+Q +GL PDD F + AC++ + EG
Sbjct: 84 PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR-Q 142
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ G+ ++ ++++M + +D A +K+ EP V + ++
Sbjct: 143 LHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI-WEPCVVTYNAMIT 195
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 234/400 (58%), Gaps = 17/400 (4%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G+ +EA+ + ++ + I D S L+ AC A E+ K VH H+ + +
Sbjct: 391 QDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIF 450
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY++C S++DA FS + R + SW MI G A++G G++A+ +F Q + G
Sbjct: 451 AGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVG 510
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ P+ + V AC+ G V E +F SM +GI P +HY ++D+LG G L+ A
Sbjct: 511 VPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAA 570
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN- 625
+E + KMP + + VW L+ R+H N++LG++ AE++ L+P EKS ++ N
Sbjct: 571 MELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEP----EKSGTHVLLANI 626
Query: 626 ------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
L K+ + KK + LEV+ KV+ + GD SH + +IYA + L
Sbjct: 627 YASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDEL 686
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+K+AGY+P LHD+++ KE+ L HSE+LAV+ GL+++P APIR+ KNLR+C
Sbjct: 687 SDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRIC 746
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ LK ISKIV RE+I+RD RFHHF++G CSC +YW
Sbjct: 747 FDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+E+L + K + ++ T S ++AC E + +H + ++ G++
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+C+SMDDA VF M ERD+ +W+ +I+G ++N E+A +F G+ +
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315
Query: 514 FIGVFSACSAL-GDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFI 570
V + +AL + + +H S+ + +YV S++D G G++++A
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGF----EFDNYVVNSLIDTYGKCGHVEDATRVF 371
Query: 571 EKMPM 575
E+ P+
Sbjct: 372 EESPI 376
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F +++AC K L K VH V N ++ +Y++C DA S+F +
Sbjct: 12 AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+R + SW+ + + + + + +AV +F +G++P++ + + C+ L D V+G
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQG- 130
Query: 532 LHFESMSKDYGIVPSMKH------YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
K +G + + + ++VDM G L++A +++ +PD+ W +
Sbjct: 131 ------RKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDIVSWNAI 183
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+ C +H E R E+ L E +K+G+ P
Sbjct: 184 IAGCVLH---EYHHRALEL--------LREMNKSGMCP 210
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 8/205 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--N 449
+EA + L+ + I + T S ++++ +A + +H L S Y N
Sbjct: 295 EEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHA--LSLKSGFEFDNYVVN 352
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ Y +C ++DA VF DL + +++T +A++G GE+A+ ++ + + G+KP
Sbjct: 353 SLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKP 412
Query: 510 DDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D + + +AC++L +G +H + +G + + S+V+M G +++A
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILK--FGFMSDIFAGNSLVNMYAKCGSIEDASC 470
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHG 593
++P+ V W ++ HG
Sbjct: 471 AFSRIPVRGIVS-WSAMIGGLAQHG 494
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++ C + + + +H ++ +L + N ++ MY++ ++DA SVF +
Sbjct: 113 SLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEI 172
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
+ D+ SW+ +I G + A+++ + ++G+ P+ AC+ + G
Sbjct: 173 AKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGR 232
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
LH + D G + V ++DM +D+A + MP E D+ W +++
Sbjct: 233 QLHSSLIKMDMGSDSFLG--VGLIDMYSKCNSMDDARLVFKLMP-ERDMIAWNAVIS 286
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 240/414 (57%), Gaps = 21/414 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-----EH 435
+ GLV +AIE GL+ + + TF +++AC L+ +H E
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEW 142
Query: 436 VERLLSPL----RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+ + + + V ++ MY++C +M+ A SVF M E+D+ SW MI G+A NGL
Sbjct: 143 IHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGL 202
Query: 492 GEDAVDIFSQFK---QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
++A+D+F Q + + G+KPD FIG+ C+ G V EG +F SM + + + PS++
Sbjct: 203 PKEAIDLFLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 262
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
HY +VD+LG G LDEA + I MPME + VW L+ CR+H + +L + + + +L
Sbjct: 263 HYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIEL 322
Query: 609 DP------SRLNEKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTS 659
+P L+ A L A+++ EK +K + +EV VHE+ GD
Sbjct: 323 EPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKY 382
Query: 660 HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP 719
HP ++KIYA + L +MK AGY+P T FVL DI++E KE L HSE+LA++ GL+S+
Sbjct: 383 HPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISAT 442
Query: 720 ARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A IR++KNLRVCGDCH A+K+IS I GRE+ +RD RFH F++G CSC DYW
Sbjct: 443 PTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 496
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 449 NGILKMYSEC--DSMDDAFS--VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
N +L M C D D ++ +F + + ++ W+TMI G N +DA++ + +
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY--------GIVPSMKHYVSIVDM 556
G P++ F V AC+ L D+ G+ + K++ G+V ++ S+VDM
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKEWIHKCIMEMGMVRNVFVGTSLVDM 165
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +++A + MP E D+ W ++
Sbjct: 166 YAKCGNMEKARSVFDGMP-EKDIVSWGAMI 194
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 261/465 (56%), Gaps = 25/465 (5%)
Query: 327 SRRQYQQNP--NEGQYQS-YSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
+R+ + ++P + + S +G ++ G M QV+ K ++ E S + +
Sbjct: 183 ARKLFDESPVLDSVSWNSILAGYVKKGDMG-QVMEAWKLFNEMDEKDMVSWS----ALIS 237
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G +EA+ + + + +D ++ AC ++ K +H V R+
Sbjct: 238 GYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIES 297
Query: 444 RVSTYNGILKMYSE----CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V+ N ++ MYS+ C +++A VF+ M E+ ++SW+ +I G A NGL E ++D+F
Sbjct: 298 YVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 357
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S+ K G+ P++ F+GV AC +G V EG HF SM + +GI P++KHY +VD+LG
Sbjct: 358 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 417
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L+EA + IE MPM PDV W L+ C+ HG+ E+G+R + +L P ++
Sbjct: 418 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPD--HDGFHV 475
Query: 620 GLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS+ + K++ K +L+E VHE+ AGD +HP +K+
Sbjct: 476 LLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEG 535
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ + ++K GY P+T V DID+E KE L HSE+LA++ GLL+ PIRIMK
Sbjct: 536 MLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMK 595
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH+A K+ISK RE+++RD RFH+FK+G CSC DYW
Sbjct: 596 NLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 46/258 (17%)
Query: 371 RSSQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE- 427
R +NG + + ++ ++A+ + L+ K + D T+ ++QAC + LE
Sbjct: 88 RIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEF 146
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA----------------------- 464
K +H+HV ++ V N ++ MY+ C +M DA
Sbjct: 147 GGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYV 206
Query: 465 -----------FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+ +F+ M E+D+ SW +I+G+ +NG+ E+A+ +F + G++ D+ +
Sbjct: 207 KKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 266
Query: 514 FIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
+ V SAC+ L G ++ G++ + + ++ H S DM G ++ ALE
Sbjct: 267 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS--DMYMKCGCVENALE 324
Query: 569 FIEKMPMEPDVDVWEKLM 586
M E V W L+
Sbjct: 325 VFNGME-EKGVSSWNALI 341
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 242/402 (60%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ G+ ++A+E ++ + D T ++ AC ALE + ++ RL
Sbjct: 264 MIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLG 323
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V N ++ MYS+C S++ A VF +M RD +W +I G A NG GE+A+D+F
Sbjct: 324 IKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFY 383
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +A PD+ F+GV +AC+ G V +G F SM++ Y I P++ HY ++D+LG
Sbjct: 384 RMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRA 443
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G L EAL+ I+KMPM+P+ +W L+ CR++GN E+G+ AE + +LDP S
Sbjct: 444 GKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLS 503
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ KS ++ EK KK +++E+ +HE+ A D SHP +IY+ +
Sbjct: 504 NMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLE 563
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++ AGY+P+ VL ++ +E K++ L HSE+LAV+ LL+S + IRI+KNLR
Sbjct: 564 NVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLR 623
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH+A+K+ISK+ GRE+I+RD RFHHF+ G CSC+DYW
Sbjct: 624 MCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 40/197 (20%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAF---- 465
T+ ++ ACG K L VH+ V +L RV N ++ MY+EC MD A+
Sbjct: 163 TYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVE--NALVDMYAECGDMDAAWVLFE 220
Query: 466 ---------------------------SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+F +M ERD +W MI G+ + G DA++
Sbjct: 221 GMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALET 280
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDM 556
F + ++ D+ + V +AC+ LG + G M + GI M +V +++DM
Sbjct: 281 FRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGR-LGI--KMDVFVGNALIDM 337
Query: 557 LGSTGYLDEALEFIEKM 573
G ++ AL+ + M
Sbjct: 338 YSKCGSIERALDVFKDM 354
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 231/392 (58%), Gaps = 14/392 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ +++Q + P+ ++ C +L+ + VH H+ R V + ++
Sbjct: 314 EALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLM 373
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C + A VF +D+ W+++I+G+A +GLGE+A+ +F + +G P+
Sbjct: 374 TMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKV 433
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
I + +ACS G + EG+ FESM + + P+++HY VDMLG G +D+A+E I
Sbjct: 434 TLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINS 493
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS----- 627
M ++PD VW L+ C+ H L+L + A+ + +++P N L +NAS
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPE--NAGPYILLSSINASRSKWG 551
Query: 628 ELAKEKEN------KKLASQNLLEVRSKVHEY-RAGDTSHPETDKIYALIRGLRAQMKEA 680
++A+ ++N K + +EV KVH + R G +HPE I ++ ++EA
Sbjct: 552 DVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREA 611
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY P+ VLHD+D+E K ++L HSERLAV++GLL P PIR+MKNLRVCGDCH+A+
Sbjct: 612 GYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAI 671
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
K+ISK+ RE+I+RDA RFHHF +G CSCRDY
Sbjct: 672 KLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 118/295 (40%), Gaps = 79/295 (26%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--- 437
+ GL +EG+V EA E+ + ++ ++ T++ ++ G K ++ A+ + E +
Sbjct: 178 MIGGLCREGRVDEAREIFDEMRER----NVITWTTMITGYGQNKRVDVARKLFEVMPEKT 233
Query: 438 ---------------RL--------LSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTE 473
R+ + P++ V N ++ E + A VF M +
Sbjct: 234 EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMED 293
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL--------- 524
RD +W MI + + G +A+++F+Q ++ G++P I + S C+ L
Sbjct: 294 RDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQV 353
Query: 525 --------------------------GDVVEGMLHFESM-SKDYGIVPSMKHYVSIVDML 557
G++V+ L F+ SKD + + SI+
Sbjct: 354 HAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD------IIMWNSIISGY 407
Query: 558 GSTGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
S G +EAL+ +MP+ P+ ++ C G LE G EI E ++
Sbjct: 408 ASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEG---LEIFESME 459
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++N I+ Y +A +F M ER++ SW+ +++G+ KN + E+A ++F +
Sbjct: 48 IGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPE 107
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST---G 561
+ + G G VVE L F M + ++ VS M G G
Sbjct: 108 RNVVSWTAMVKGYVQE----GMVVEAELLFWRMPE--------RNEVSWTVMFGGLIDGG 155
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+D+A + + MP + V + LCR
Sbjct: 156 RIDDARKLYDMMPGKDVVASTNMIGGLCR 184
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 66/361 (18%), Positives = 145/361 (40%), Gaps = 62/361 (17%)
Query: 259 GEVMQNRNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQN 318
G++ + R F+S R+ +++GS+N +SG+++ G+ + + + +
Sbjct: 31 GQINEARKFFDSLRY-KAIGSWN-----------SIVSGYFAN--GLPREARQMFDEMPE 76
Query: 319 GGQYQW-------------DQSRRQYQQNPNEGQYQSYS----GNIQNGMMASQVLNNCK 361
W +++R ++ P E S++ G +Q GM+ +
Sbjct: 77 RNIVSWNGLVSGYIKNRMIEEARNVFEIMP-ERNVVSWTAMVKGYVQEGMVV-------E 128
Query: 362 HEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG 421
E F ++ + T+ GL+ G++ +A ++ ++ + + L C
Sbjct: 129 AELLFWRMPERNEVSWTV-MFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGL---CR 184
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
+ + E + E ER V T+ ++ Y + +D A +F M E+ SW +
Sbjct: 185 EGRVDEAREIFDEMRER-----NVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTS 239
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS-KD 540
M+ G+ +G EDA + F + + + + A +G++V+ F+ M +D
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV----ALGEVGEIVKARRVFDQMEDRD 295
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLEL 597
+ ++ G+ EALE +M + P ++++C +L+
Sbjct: 296 NAT------WRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQY 349
Query: 598 G 598
G
Sbjct: 350 G 350
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 242/405 (59%), Gaps = 16/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLL--EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G K EA+ + LL EK+ S D T + ++ AC A ++ + +H ++ R
Sbjct: 470 IGGYSKNCYANEALSLFNLLLVEKR-FSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
S V+ N ++ MY++C ++ A +F ++T +DL SW MI G+ +G G++A+
Sbjct: 529 GYFSDRHVA--NSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F+Q +QAG++PD+ F+ + ACS G V EG F M + I P+++HY IVDML
Sbjct: 587 LFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDML 646
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
TG L +A FIE MP+ PD +W L+ CR+H +++L +R AE V +L+P
Sbjct: 647 ARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYV 706
Query: 618 KAGLVPVNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ A + + K +K Q + +E++ +V+ + AGD+S+PET+KI A
Sbjct: 707 LMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEA 766
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+RG+RA+M E GY P T++ L D ++ KEEAL HSE+LA++ G++SS IR+ K
Sbjct: 767 FLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTK 826
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH K +SK+ RE+++RD+ RFH FKDG CSCR +W
Sbjct: 827 NLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +EG EA+++ +E++ IS D+ T + ++ C + L+E K VHE ++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEND 427
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C SM +A VFS M +D+ SW+T+I G++KN +A+ +F+
Sbjct: 428 MGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFN 487
Query: 501 -QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV-SIVDML 557
+ PD++ V AC++L +G +H M Y S +H S+VDM
Sbjct: 488 LLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMY 544
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L A + + D+ W ++ MHG
Sbjct: 545 AKCGALLLARLLFDDIT-SKDLVSWTVMIAGYGMHG 579
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G V G ++ + V + I +DL T + C D++ + +AVH +
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF 327
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MYS+C +D A VF M+ R + S+ +MI G+A+ GL +AV +F +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ PD V + C+ + EG +H D G + + +++DM
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKC 445
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + EA +M ++ D+ W ++
Sbjct: 446 GSMREAELVFSEMRVK-DIISWNTVI 470
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 43/266 (16%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++ L K G +I + + + +D TFS + ++ +++ + +H ++ +
Sbjct: 167 MNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGF 226
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
R S N ++ Y + +D A VF MTERD+ SW+++I G+ NGL E + +F Q
Sbjct: 227 GERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 502 FKQAGLKPDDQIFIGVFSAC-----------------------------------SALGD 526
+G++ D + VF+ C S GD
Sbjct: 287 MLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME---PDVDVWE 583
+ + F MS S+ Y S++ G EA++ E+M E PDV
Sbjct: 347 LDSAKVVFREMSG-----RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLD 609
++N C + L+ G R E +++ D
Sbjct: 402 AVLNCCARNRLLDEGKRVHEWIKEND 427
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D RS + T QL + G +K A+++L + K +D T ++Q C D+
Sbjct: 52 DSITTFDRSVTDANT--QLRRFCESGNLKNAVKLLHVSGKW--DIDPRTLCSVLQLCADS 107
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
K+L++ K V + L + + + MY+ C + +A VF + W+ ++
Sbjct: 108 KSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILM 167
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
AK+G ++ +F + +G++ D F V + S+L V G LH + +G
Sbjct: 168 NELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFG 227
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S+ + S+V +D A + ++M E DV W ++N
Sbjct: 228 ERNSVGN--SLVAFYLKNHRVDSARKVFDEMT-ERDVISWNSIIN 269
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 223/376 (59%), Gaps = 17/376 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
T S ++ AC A+ K +H +V R S Y N ++ MYS+C +D A VF
Sbjct: 373 TISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTARHVF 431
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+M+++ SW +M+TG+ +G G +A+DIF + ++AG PDD F+ V ACS G V
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 491
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ +F+SMS DYG+ P +HY +D+L G LD+A + ++ MPMEP VW L++
Sbjct: 492 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR+H N+EL + + +++ N+ S + + A+ L K+ KK
Sbjct: 552 CRVHSNVELAEHALNKLVEMNAE--NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 609
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ ++ + + GD SHP + +IYAL+ L ++K GY+PET F LHD+D+E
Sbjct: 610 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 669
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K L+ HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+++RD
Sbjct: 670 KNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 729
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFK+G CSC YW
Sbjct: 730 RFHHFKNGSCSCGGYW 745
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ ACG KA+ + K VH + R + L V N ++ Y++C M++A VF
Sbjct: 119 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 178
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ M +D+ SW+ M+ G++++G + A ++F ++ + D + V + S G
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
E + F M G +P+ +S++ S G + +E
Sbjct: 239 EALNVFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGMEI 278
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 42/252 (16%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR------- 444
E L + + S LP T ++ AC A + +H + ++ L L
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298
Query: 445 --VSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ YN ++ MYS+C S A S+F + + ER++ +W MI G A+ G DA+ +F
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358
Query: 501 QF--KQAGLKPDDQIFIGVFSACSALGDVVEG-------MLHFESMSKDYGIVPSMKHYV 551
+ + G+ P+ + AC+ L + G + H + S Y + +
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL---- 414
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
++M G +D A + M + + W +M MHG R +E ++ D
Sbjct: 415 --INMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG------RGSEALDIFDKM 465
Query: 612 RLNEKSKAGLVP 623
R KAG VP
Sbjct: 466 R-----KAGFVP 472
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T +++ACG+ + A H + V N ++ MYS C S+++A +
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67
Query: 468 FSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF------KQAGLKPDDQIFIGVF 518
F +T+R D+ SW+++++ K+ A+D+FS+ K + D + +
Sbjct: 68 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 127
Query: 519 SACSALGDV 527
AC +L V
Sbjct: 128 PACGSLKAV 136
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 228/371 (61%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ AC D A K VH ++ + ++ MYS+C + A VF+ M
Sbjct: 323 TFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEM 382
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ DL SW ++I G+A+NG ++A+ F Q+G KPD ++GV SAC+ G V +G+
Sbjct: 383 HQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGL 442
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F S+ + +G++ + HY ++D+L +G EA I+ MP++PD +W L+ CR+
Sbjct: 443 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRI 502
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---SELAKEKENK------KLASQN 642
HGNLEL R A+ + +++P + NA SE+A +++ K ++
Sbjct: 503 HGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKS 562
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E++ +VH + GDTSHP+T I+ + L ++KE GY+P+T FVLHD+++E KE+ L
Sbjct: 563 WIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNL 622
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
+ HSE+LAV G++S+P PI++ KNLR C DCH+A+K ISKIV R++ +RD+ RFH F
Sbjct: 623 VYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCF 682
Query: 763 KDGLCSCRDYW 773
+DG CSC+DYW
Sbjct: 683 EDGSCSCKDYW 693
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 47/263 (17%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
S++N E +D L ++ +VKEA+E LL + +S L+ AC +ALE + V
Sbjct: 53 SEDNKFEEAVDVLCQQKRVKEAVE---LLHRTDHRPSARVYSTLIAACVRHRALELGRRV 109
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H H + V N +L MY++C S+ DA +F M RDL SW+TMI G+AK G
Sbjct: 110 HAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRL 169
Query: 493 EDAVDIFSQFKQ----------AGLKPDDQI--FIGVFSA-------------------- 520
E A +F + Q +G +Q + +F
Sbjct: 170 EQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAA 229
Query: 521 -----CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
C LG + G L ++ D + + +++D+ G G LDEA ++M
Sbjct: 230 SAAIPCLRLGKEIHGYLIRTELNLDEVV------WSALLDLYGKCGSLDEARGIFDQMK- 282
Query: 576 EPDVDVWEKLMNLCRMHGNLELG 598
+ DV W +++ C G E G
Sbjct: 283 DRDVVSWTTMIHRCFEDGRREEG 305
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEK-QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V + +EA+E+ ++++ + S + T S + A L K +H ++ R
Sbjct: 191 ISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTE 250
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L ++ +L +Y +C S+D+A +F M +RD+ SW TMI ++G E+ +F
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIV 554
Q+G++P++ F GV +AC+ LG V G M+H G P ++V
Sbjct: 311 DLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMH-------AGYDPGSFAISALV 363
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G A +M +PD+ W L+
Sbjct: 364 HMYSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 246/425 (57%), Gaps = 17/425 (4%)
Query: 360 CKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA 419
C D+ E +S + + G + G+ E +++L ++ + +S D T + ++
Sbjct: 122 CVMFDEMPEPDSASWST----MVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGV 177
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
CGD L+ K VH ++++ + V ++ MYS+C S+D+A VF M ERD+T+W
Sbjct: 178 CGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTW 237
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
MI G+A +G E A+ +F K++ + P+ F V SA S G V +G FE+M
Sbjct: 238 SIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWT 297
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+Y I P +KHY +VD+ G + A +FI+ MP+EP+V +W L+ C+ HG LG+
Sbjct: 298 EYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGE 357
Query: 600 RCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRS 648
+ + +LDPS + ++ + V AS L KEK KK + +E+
Sbjct: 358 HISRKILKLDPS--SPENYVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINF 415
Query: 649 KVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSER 708
VH++ G+ SHP+ +KIY ++ + ++K+ G++ T VLHDID+E KE AL HSER
Sbjct: 416 MVHKFIMGEESHPKREKIYGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSER 475
Query: 709 LAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCS 768
LA+++GLL +P +PIRI+KNLR C DCH +K+IS++ RE+I+RD FHHF++ CS
Sbjct: 476 LAIAYGLLHTPNGSPIRIVKNLRACRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCS 535
Query: 769 CRDYW 773
C DYW
Sbjct: 536 CNDYW 540
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
IS + TF ++ AC L E + +H + + NG++K+Y+ C MD A
Sbjct: 63 ISPNSYTFGFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYAC 122
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M E D SW TM++G+++NG + + + + + + D V C LG
Sbjct: 123 VMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLG 182
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G + K+ G+ + ++V M G LD AL+ + M E DV W +
Sbjct: 183 VLDLGKWVHSYIDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMA-ERDVTTWSIM 240
Query: 586 MNLCRMHGNLE 596
+ +HG+ E
Sbjct: 241 IAGYAIHGHDE 251
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +FS +L W+T+I G++ + A+ ++ G+ P+ F V +AC
Sbjct: 20 AHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCK 79
Query: 524 LGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
L + EG LH + + + + ++ + + G +D A ++MP EPD W
Sbjct: 80 LLRLCEGQELHSQIVKAGLDFETPLLN--GLIKLYAACGCMDYACVMFDEMP-EPDSASW 136
Query: 583 EKLMN 587
+++
Sbjct: 137 STMVS 141
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G +A+E+ ++ + D T ++ A D ALE A+ V VER
Sbjct: 201 MIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+ N ++ ++C +D A +VF M +R + SW ++I A G G++AV +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K AG+ PDD FIGV +ACS G V EG +F++M +YGI P ++HY +VDM G
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++ A+EF+ MP++P+ +W L++ CR HG LELG+ + P+ +E +
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPA--HEANYIM 438
Query: 621 LVPVNA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L V A SE+ +E KK+ +++E+ +VHE+ AGD SHP+ IY +
Sbjct: 439 LSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRM 498
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ G+I T VL D+D+E KE AL HSE+LA++ LL +P +R++KN
Sbjct: 499 VEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKN 558
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+A+K IS++ RE+++RD RFH FKDG CSC+D+W
Sbjct: 559 LRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSEC---DSMDDAFS 466
TF L++AC + + H L Y N ++ MYS C + DA +
Sbjct: 128 TFPFLLKACAALPGSPDV-GLQAHAAALKFGFATDQYVSNTLIHMYS-CFGGGFLGDARN 185
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M + +W MI G+ + GL DAV++F + + G++ D+ IGV +A + LG
Sbjct: 186 VFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLG- 244
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+E + GI S+ +++D L G +D A+ E M + V W ++
Sbjct: 245 ALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM-QQRSVVSWTSVI 303
Query: 587 NLCRMHGNLELGDRCAEIVEQL 608
+ M G G + E++
Sbjct: 304 DALAMEGR---GKEAVRVFEEM 322
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 247/404 (61%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + + EA+ + L+ + + + T ++ +C AL+ K +HE+V++ L
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
++V+T ++ MY++C S+D A SVF +M+ RD +W MI +A +G G+D + +F
Sbjct: 260 DKYVKVNT--ALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMF 317
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +A ++PD+ F+G+ ACS G V EG +F SMS+ YGI+P +KHY +VD+LG
Sbjct: 318 EEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGR 377
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------- 612
G L EA +FI+++P++P +W L++ C HGNLEL + + +LD S
Sbjct: 378 AGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVIL 437
Query: 613 LNEKSKAG-LVPVNA-SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N ++AG V+ +L K K+ + +EV + VHE+ +GD H + ++ +
Sbjct: 438 SNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRAL 497
Query: 671 RGLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
L ++K GY+P+T V+H D++ E KE L HSE+LA+S GLL++P IR++KN
Sbjct: 498 DELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKN 557
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCHSA K+IS ++ RE+I+RD +RFHHFKDG CSC DYW
Sbjct: 558 LRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 20/270 (7%)
Query: 339 QYQSYS--GNIQNGM-MASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVK--- 392
Q Q++S ++QN + + ++++N+C A + Q + Q D ++ +
Sbjct: 44 QIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYS 103
Query: 393 ---EAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERL---LSPL 443
++ + L K LP TF L++AC AKA ++ K +H +L +P
Sbjct: 104 RSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPY 163
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
T ++ MY+ C+ +D A VF + E + S++ +ITG+A++ +A+ +F Q +
Sbjct: 164 VCPT---LINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQ 220
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
LKP+D + V S+C+ LG + G E + K+ G+ +K +++DM G L
Sbjct: 221 ARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKN-GLDKYVKVNTALIDMYAKCGSL 279
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
D A+ E M + D W ++ MHG
Sbjct: 280 DGAISVFESMSVR-DTQAWSAMIVAYAMHG 308
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 246/436 (56%), Gaps = 36/436 (8%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGD 422
D E S T LD K G + A ++ GL +K +S ++ ++ C
Sbjct: 218 DKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS-----WTAMIAGCIR 272
Query: 423 AKALEEAKAVHEHV-ERLLSPLRVSTYN------------GILKMYSECDSMDDAFSVFS 469
+ LEE + + E + P ++ N ++ MY++C ++ A +F
Sbjct: 273 SNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFI 332
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
RD+ W+ +ITGFA +G GE+A+DIF++ ++ G+KP+D FIG+ ACS G V E
Sbjct: 333 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 392
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G FE M +G+VP ++HY +VD+LG G LDEA E I+ MP++P+ VW L+ C
Sbjct: 393 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 452
Query: 590 RMHGNLELGDRCAEIVEQLDP-------------SRLNEKSKAGLVPVNASELAKEKENK 636
R+H N +LG+ A + +++P + N S A V + +KE
Sbjct: 453 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKE-- 510
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
+++EV VHE+ GD SHP+ +I ++ +R ++ EAGY+P+T VL +ID+E
Sbjct: 511 --PGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEE 568
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE AL HSE+LA++ GL+S+ PIRI+KNLRVC DCH+A K++SKI GR +I+RD
Sbjct: 569 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 628
Query: 757 KRFHHFKDGLCSCRDY 772
RFHHF++G CSC DY
Sbjct: 629 NRFHHFREGYCSCGDY 644
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 247/446 (55%), Gaps = 25/446 (5%)
Query: 346 NIQNGMMASQVLNNCKHEDD----FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLG-L 400
+I+ +M V +NC DD F+E S TL L G AI+ +
Sbjct: 259 HIKTALMDIYVSHNC--VDDAHRVFSEMSVKDVAAWTL-MLTGFSSGRHWDRAIKHFNKM 315
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L Q + +D ++ +C + AL++ + VH + + + ++ MY+ C +
Sbjct: 316 LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++DA F M E+D+ W+ MI G NG G DA+D+F Q K +GL PD+ F+ V A
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS G V EG+ F M K ++P+++HY ++D+LG G LD A FI MP +PD D
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLAS 640
V+ L+ CR+HGN++LG ++ + +++P N+ L+ N LA E K+
Sbjct: 496 VYSTLLGACRIHGNIKLGHEISQKIFEMEP---NDAGYYVLLS-NMYALAGNWEGVKMTR 551
Query: 641 QNL-------------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+L +E+ +++ + AG+ HP+ KI +++GL ++K+AGY+P T
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
+L D+ + K++ L HSE++A++ GL+ + IRI KNLR C DCH+A K +SK+
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVF 671
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
GR L+I+DA RFH F+DG+CSCRDYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL K EAI+V + + T S ++ A + + AK+VH R
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS+ M A +F +M+ER++ +W+ +++G++ +G E+A+D+F+
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 502 FKQAGLKPDDQIFIGVFSA-----CSALGDVVEGMLHFESMSKDYGIVPSMKHY-VSIVD 555
++ GL D + + A C +G + G + D KH +++D
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND-------KHIKTALMD 266
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ S +D+A +M ++ DV W ++
Sbjct: 267 IYVSHNCVDDAHRVFSEMSVK-DVAAWTLMLT 297
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNM 471
+ +++ D K L++ H + + S L +T+ N ++ Y C + DA +F +
Sbjct: 28 ASILRKLKDLKPLQQI-----HAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEG 530
+++ SW +I+G AKN +A+D+F + KP+ V A + LG + +
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + G ++ ++VDM G + A + E M E +V W +++
Sbjct: 143 SVHCFWVRG--GFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYS 199
Query: 591 MHG 593
HG
Sbjct: 200 DHG 202
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 223/373 (59%), Gaps = 14/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ + VH H+ + L N +L MY++ SM DA VF M
Sbjct: 161 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 220
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RDL +W+TM+T A+ GLG++AV F + ++ G++ + F+ V +ACS G V EG
Sbjct: 221 DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK 280
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
H+ M KDY + P + HYVS VD+LG G L EAL F+ KMPMEP VW L+ CRM
Sbjct: 281 -HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRM 339
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N ++G A+ V +LDP + L + AS ++ K KK +
Sbjct: 340 HKNAKMGQYAADHVFELDPD--DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPA 397
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +++ + VH + A D +HP++ IY + + ++K+AGY+P T VL I+++ +E
Sbjct: 398 CSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERET 457
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE++A++ L++ PA A IRIMKN+R+CGDCHSA K +SK+ RE+++RD RFH
Sbjct: 458 KLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFH 517
Query: 761 HFKDGLCSCRDYW 773
HF +G CSC DYW
Sbjct: 518 HFSEGSCSCGDYW 530
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E +GLL + P TF+ L++A G + +H + V + +L
Sbjct: 41 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 100
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C+ MD A VF + ++ SW+ +I GFA+ GE + F++ ++ G
Sbjct: 101 DMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHF 160
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ +FSA + +G + +G +H + + + + +++ M +G + +A + +
Sbjct: 161 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGN--TMLGMYAKSGSMVDARKVFD 218
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
+M + D+ W ++ +G
Sbjct: 219 RMD-KRDLVTWNTMLTALAQYG 239
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY +C ++ DA VF M RD+ SW +I G+A+N + +A+ + +A +P+
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F + A A G G +++ Y + +++DM +D A+ +++
Sbjct: 61 FTSLLKATGACGGCSIGE-QMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 574 PMEPDVDVWEKLM 586
+ +V W L+
Sbjct: 120 VSKNEVS-WNALI 131
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 236/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ V + ++ I + TF ++A + +++ K VH + +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C S+ DA F ++ ++ SW+ +I ++K+G G +A+D F Q
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ +GV SACS +G V +G+ +FESM+ +YG+ P +HYV +VDML G
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L A EFI++MP++PD VW L++ C +H N+E+G+ A + +L+P S
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L SK + KEK KK Q+ +EV++ +H + GD +HP D+I+ +
Sbjct: 904 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 963
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + E GY+ + +L+++ E K+ + HSE+LA+S GLLS PA PI +MKNLRV
Sbjct: 964 LTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRV 1023
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ +K +SK+ RE+I+RDA RFHHF+ G CSC+DYW
Sbjct: 1024 CNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
R ++ + + GL K EAI + + I FS ++ AC ++LE +
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+H V +L N ++ +Y ++ A +FSNM++RD +++T+I G ++ G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM--------LHFESMSK--- 539
GE A+++F + GL+PD + ACSA G + G L F S +K
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 540 ----------------DYGIVPSMKHYVSIVDMLGSTGYLDE---ALEFIEKMPME---P 577
DY + +++ V ML + G LD+ + +M +E P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 578 DVDVWEKLMNLCRMHGNLELGDR 600
+ + ++ C G+LELG++
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQ 511
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 42/258 (16%)
Query: 378 TLEQLDGLVKEGKVKEAI-EVLGLLEKQCISVDLP---TFSQLMQAC-GDAKALEEAKAV 432
T+ + ++KE + I EV GL + P TFS +++AC G + A + + +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 433 HEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
H + L LR ST N ++ +YS +D A VF + +D +SW MI+G +KN
Sbjct: 210 HARI--LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKD----- 540
+A+ +F G+ P F V SAC +G+ + G++ S D
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 541 --------YGIVPSMKH------------YVSIVDMLGSTGYLDEALEFIEKMP---MEP 577
G + S +H Y ++++ L GY ++A+E ++M +EP
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 578 DVDVWEKLMNLCRMHGNL 595
D + L+ C G L
Sbjct: 388 DSNTLASLVVACSADGTL 405
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++ C LE + +H + + L + ++ MY++ +D A+ +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ SW TMI G+ + + A+ F Q G++ D+ SAC+ L + EG
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 246/409 (60%), Gaps = 22/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD-AKALEEAKAVHEHV--E 437
L G + G+ +EA ++ L K+ I + TFS ++ AC A E+ K H +
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKM 524
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
RL + L VS+ ++ MY++ ++D A VF ERDL SW++MI+G++++G + A++
Sbjct: 525 RLNNALCVSS--ALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALE 582
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + ++ + D FIGV +AC+ G V +G +F SM D+ I P+MKHY ++D+
Sbjct: 583 VFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLY 642
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G L++A+ I +MP P VW L+ R+H N+ELG+ AE + L P E S
Sbjct: 643 SRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQP----EDS 698
Query: 618 KAGLVP-------------VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
A ++ N +L +++ KK + +EV++K + + AGD +HP ++
Sbjct: 699 AAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSN 758
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY+ + L ++K+AGY P+T+ V HDI+ E KE L HSERLA++ GL+++P PI
Sbjct: 759 QIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPI 818
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+I+KNLRVCGDCH+ K++S + R +++RD+ RFHHFKDGLCSC DYW
Sbjct: 819 QIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ +N ++ +YS + DA VF M RD +W++MI G+ +NG + +IF++ +
Sbjct: 229 IPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQL 288
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG+KP F V +C++L ++ L + + G +++ L +D
Sbjct: 289 AGVKPTHMTFASVIKSCASLRELALVKL-MQCKALKSGFTTDQIVITALMVALSKCKEMD 347
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+AL M +V W +++ C +G
Sbjct: 348 DALSLFSLMEEGKNVVSWTAMISGCLQNG 376
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ E E+ ++ + TF+ ++++C + L K + +
Sbjct: 266 MIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSG 325
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIF 499
++ S+C MDDA S+FS M E +++ SW MI+G +NG + AV++F
Sbjct: 326 FTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLF 385
Query: 500 SQFKQAGLKPDDQIFIGVFSA 520
SQ ++ G+KP+ + + +
Sbjct: 386 SQMRREGVKPNHFTYSAILTV 406
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 357 LNNCKHEDD----FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
L+ CK DD F+ + G ++ G +A+ + + ++ + + T
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399
Query: 413 FSQLMQACGDAKALE-EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+S ++ E A+ + + ER S +L Y + + DA VF +
Sbjct: 400 YSAILTVHYPVFVSEMHAEVIKTNYER-----SSSVGTALLDAYVKLGNTIDAVKVFEII 454
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+DL +W M+ G+A+ G E+A +F Q + G+KP++ F V +AC++ E
Sbjct: 455 EAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQG 514
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F + + + ++ ++V M G +D A E ++ E D+ W +++
Sbjct: 515 KQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQ 573
Query: 592 HG 593
HG
Sbjct: 574 HG 575
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++ + KEA+ + L + D T S + C + + + VH + VS
Sbjct: 70 RDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVS 129
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ MY + ++++D VF M ER++ SW +++ G++ NGL ++F Q + G
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG 189
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ P+ V +A G V G L +M +G ++ + S++ + G L +A
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIG-LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248
Query: 567 LEFIEKMPMEPDVDVWEKLM 586
+ +KM + D W ++
Sbjct: 249 RDVFDKMEIR-DWVTWNSMI 267
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 236/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ V + ++ I + TF ++A + +++ K VH + +
Sbjct: 624 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 683
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C S+ DA F ++ ++ SW+ +I ++K+G G +A+D F Q
Sbjct: 684 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 743
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ +GV SACS +G V +G+ +FESM+ +YG+ P +HYV +VDML G
Sbjct: 744 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 803
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L A EFI++MP++PD VW L++ C +H N+E+G+ A + +L+P S
Sbjct: 804 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 863
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L SK + KEK KK Q+ +EV++ +H + GD +HP D+I+ +
Sbjct: 864 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 923
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + E GY+ + +L+++ E K+ + HSE+LA+S GLLS PA PI +MKNLRV
Sbjct: 924 LTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRV 983
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ +K +SK+ RE+I+RDA RFHHF+ G CSC+DYW
Sbjct: 984 CNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
R ++ + + GL K EAI + + I FS ++ AC ++LE +
Sbjct: 209 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 268
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+H V +L N ++ +Y ++ A +FSNM++RD +++T+I G ++ G
Sbjct: 269 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 328
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM--------LHFESMSK--- 539
GE A+++F + GL+PD + ACSA G + G L F S +K
Sbjct: 329 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 388
Query: 540 ----------------DYGIVPSMKHYVSIVDMLGSTGYLDE---ALEFIEKMPME---P 577
DY + +++ V ML + G LD+ + +M +E P
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 578 DVDVWEKLMNLCRMHGNLELGDR 600
+ + ++ C G+LELG++
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQ 471
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 42/258 (16%)
Query: 378 TLEQLDGLVKEGKVKEAI-EVLGLLEKQC---ISVDLPTFSQLMQAC-GDAKALEEAKAV 432
T+ + ++KE + I EV GL + ++ + TFS +++AC G + A + + +
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 169
Query: 433 HEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
H + L LR ST N ++ +YS +D A VF + +D +SW MI+G +KN
Sbjct: 170 HARI--LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKD----- 540
+A+ +F G+ P F V SAC +G+ + G++ S D
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287
Query: 541 --------YGIVPSMKH------------YVSIVDMLGSTGYLDEALEFIEKMP---MEP 577
G + S +H Y ++++ L GY ++A+E ++M +EP
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347
Query: 578 DVDVWEKLMNLCRMHGNL 595
D + L+ C G L
Sbjct: 348 DSNTLASLVVACSADGTL 365
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++ C LE + +H + + L + ++ MY++ +D A+ +
Sbjct: 452 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 511
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ SW TMI G+ + + A+ F Q G++ D+ SAC+ L + EG
Sbjct: 512 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 570
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 223/373 (59%), Gaps = 14/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ + VH H+ + L N +L MY++ SM DA VF M
Sbjct: 264 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 323
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RDL +W+TM+T A+ GLG++AV F + ++ G++ + F+ V +ACS G V EG
Sbjct: 324 DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK 383
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
H+ M KDY + P + HYVS VD+LG G L EAL F+ KMPMEP VW L+ CRM
Sbjct: 384 -HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRM 442
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N ++G A+ V +LDP + L + AS ++ K KK +
Sbjct: 443 HKNAKMGQYAADHVFELDPD--DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPA 500
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +++ + VH + A D +HP++ IY + + ++K+AGY+P T VL I+++ +E
Sbjct: 501 CSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERET 560
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE++A++ L++ PA A IRIMKN+R+CGDCHSA K +SK+ RE+++RD RFH
Sbjct: 561 KLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFH 620
Query: 761 HFKDGLCSCRDYW 773
HF +G CSC DYW
Sbjct: 621 HFSEGSCSCGDYW 633
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ ++ AC K L A+A+H H+ R N ++ MY +C ++ DA VF M
Sbjct: 63 YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD+ SW +I G+A+N + +A+ + +A +P+ F + A A G G
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGE- 181
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++ Y + +++DM +D A+ +++ + +V W L+
Sbjct: 182 QMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS-WNALI 234
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E +GLL + P TF+ L++A G + +H + V + +L
Sbjct: 144 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 203
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C+ MD A VF + ++ SW+ +I GFA+ GE + F++ ++ G
Sbjct: 204 DMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHF 263
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ +FSA + +G + +G +H + + + + +++ M +G + +A + +
Sbjct: 264 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGN--TMLGMYAKSGSMVDARKVFD 321
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
+M + D+ W ++ +G
Sbjct: 322 RMD-KRDLVTWNTMLTALAQYG 342
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 242/405 (59%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA++V +++ ++ TF + A + +++ K +H V +
Sbjct: 519 ISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGY 578
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ +Y +C S++DA F MT+R+ SW+T+IT +++G G +A+D+F Q
Sbjct: 579 TSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ 638
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
KQ GLKP D F+GV +ACS +G V EG+ +F+SMS ++GI P HY +VD+LG G
Sbjct: 639 MKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAG 698
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LD A F+E+MP+ D VW L++ C++H NLE+G+ A+ + +L+P S + +
Sbjct: 699 QLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEP----HDSASYV 754
Query: 622 VPVNA-------------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ NA ++ K++ +K ++ +EV++ VH + GD HP D+IY
Sbjct: 755 LLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYN 814
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L ++ + GY E + H+ ++EGK+ HSE+LAV+ GL+S P+ P+R++K
Sbjct: 815 FLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIK 874
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH+ +K S ++GRE+++RD RFHHF +G CSC DYW
Sbjct: 875 NLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 14/252 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ KEA+E ++ I D + + AC KA+ + +H V
Sbjct: 417 MIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSG 476
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS +NG++ +Y+ C +AFS F + ++ +W+ +I+GFA++GL E+A+ +F
Sbjct: 477 YSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFM 536
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ QAG K + F+ SA + L D+ +G +H + Y + + +++ + G
Sbjct: 537 KMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISN--ALISLYGK 594
Query: 560 TGYLDEA-LEFIEKMPMEPDVDVWEKLMNLCRMHGN-LELGDRCAEIVEQ-LDPS----- 611
G +++A ++F E M +V W ++ C HG LE D ++ +Q L PS
Sbjct: 595 CGSIEDAKMDFFE-MTKRNEVS-WNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFV 652
Query: 612 -RLNEKSKAGLV 622
L S GLV
Sbjct: 653 GVLTACSHVGLV 664
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE 434
N + L G + G +EA+ + + + + S ++ AC + + + +H
Sbjct: 108 NVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHV 167
Query: 435 HVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
V + S V N ++ +Y C S A VF +M D +++T+I+G A+ G G
Sbjct: 168 QVYKQGFFSETFVG--NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHG 225
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-----MLHFESMSKDYGIVPSM 547
+ A+ IF + + +GL PD + +ACSA+GD+ +G L MS DY + S+
Sbjct: 226 DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL 285
Query: 548 KHYVSIVDMLGSTGYLDEALEFIE 571
+D+ +G ++EAL+ +
Sbjct: 286 ------LDLYVKSGDIEEALQIFD 303
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D T + L+ AC L + K +H ++ + L +L +Y + +++A
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F + ++ W+ M+ + + + DIF + AG++P+ + + C+ G
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
++ G S++ G M YVS ++DM G+LD+A ++ M E DV W
Sbjct: 360 EIGLGE-QIHSLTIKNGFQSDM--YVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVSWT 415
Query: 584 KLM 586
++
Sbjct: 416 SMI 418
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y++ + A VF ++ RD SW +++G+A+NGLGE+AV ++ + ++G+
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 509 PDDQIFIGVFSACS 522
P + + SAC+
Sbjct: 141 PTPYVLSSILSACT 154
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MYS+ +D A + + E+D+ SW +MI G+ ++ ++A++ F + + G+ PD
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445
Query: 511 DQIFIGVFSACSALGDVVEG 530
+ SAC+ + V +G
Sbjct: 446 NIGLASAISACAGIKAVHQG 465
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 272/540 (50%), Gaps = 52/540 (9%)
Query: 253 PIHYGPGEVMQN-------RNGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGI 305
P HY V++ RNG + E LG + +Q+ H AL G +
Sbjct: 111 PDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKV 170
Query: 306 HQNSPSFYQQDQNGGQYQWD-QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHED 364
P Q+D W+ R + EG Y+
Sbjct: 171 FDKMP---QRDV----ITWNIMIARLVKMGDAEGAYKL---------------------- 201
Query: 365 DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK 424
FAE + + T + G + GK KEAI++ +E + + T ++ AC D
Sbjct: 202 -FAEMPERNVRSWT-SMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMG 259
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
L + +H+ R + N ++ MY +C ++DA +F NM ER + SW MI
Sbjct: 260 NLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
G A +G EDA+ +F++ G+KP+ FIG+ ACS +G V +G +F SM++DYGIV
Sbjct: 320 GLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIV 379
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
P ++HY +VD+ G L EA EFI MP+ P+ VW L+ C++H N++L +
Sbjct: 380 PRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRH 439
Query: 605 VEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEY 653
+ +LDP LN+ L + A +L +++ KK + + V V+ +
Sbjct: 440 LSKLDP--LNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNF 497
Query: 654 RAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSH 713
AGD +HP+T++I+ L +MK GY+P T VL D++++ KE+ L HSE+LAV
Sbjct: 498 VAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVF 557
Query: 714 GLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GL+ + IRIMKNLRVC DCH+ALKIIS + RE+++RD RFH FK+G CSC DYW
Sbjct: 558 GLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+AI + L + IS D T S +++AC + K VH +VE+L + N I+
Sbjct: 96 DAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIV 155
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMIT---------------------------- 484
+Y+ C + A VF M +RD+ +W+ MI
Sbjct: 156 HLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTS 215
Query: 485 ---GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
G+A+ G ++A+D+F + + AGL P++ + V AC+ +G++V G S
Sbjct: 216 MIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGR-RIHDFSNRS 274
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +++ +++DM G L++A + M E V W ++ HG E
Sbjct: 275 GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAHGRAE 328
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
E K +H H+ + SPL + + + + S A +F + ++T W+T + FA
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFA 89
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
+ DA+ +F + ++ + PD V ACS L DV G + + K G+ +M
Sbjct: 90 EGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEK-LGLQSNM 148
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
IV + G + A + +KMP + DV W ++
Sbjct: 149 FLQNMIVHLYALCGEIGVARKVFDKMP-QRDVITWNIMI 186
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 224/375 (59%), Gaps = 17/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++A ALE + +H + + N ++ MY++C +DDA F M
Sbjct: 410 TYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM 469
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D SW+ +I G++ +GLG +A+++F +Q+ KP+ F+GV SACS G + +G
Sbjct: 470 DKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
HF+SM +DYGI P ++HY +V +LG +G DEA++ I ++P +P V VW L+ C +
Sbjct: 530 AHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVI 589
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ---------- 641
H NL+LG CA+ V +++P + ++ N AK +N +
Sbjct: 590 HKNLDLGKVCAQRVLEMEP----QDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKE 645
Query: 642 ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E + VH + GDTSHP I+A++ L + ++AGY+P+ VL D++ + K
Sbjct: 646 PGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEK 705
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E L HSERLA++ GL+ P+ IRI+KNLR+C DCH+ +K++SKIV RE++IRD R
Sbjct: 706 ERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINR 765
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+ G+CSC DYW
Sbjct: 766 FHHFRQGVCSCGDYW 780
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 15/211 (7%)
Query: 390 KVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K KEA+E+ + + SV +P TF+ ++QAC L +H V ++ V
Sbjct: 286 KSKEALELFCRMRQS--SVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVF 343
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ +Y++C ++++ +F+ TE++ +W+T+I G+ + G GE A+++FS
Sbjct: 344 VSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD 403
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM----LHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++P + + V A ++L + G L ++M +V + S++DM G
Sbjct: 404 IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN-----SLIDMYAKCGR 458
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+D+A +KM + +V W L+ +HG
Sbjct: 459 IDDARLTFDKMDKQDEVS-WNALICGYSIHG 488
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F+ L++ + +VH +V +L ++ YS C ++D A VF +
Sbjct: 106 VFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GD 526
+D+ SW M+ +A+N ED++ +F Q + G +P++ +C+ L G
Sbjct: 166 YFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGK 225
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V G +D + ++++++ +G + EA +F E+MP + D+ W ++
Sbjct: 226 SVHGCALKVCYDRDLYV------GIALLELYTKSGEIAEAQQFFEEMP-KDDLIPWSLMI 278
Query: 587 N 587
+
Sbjct: 279 S 279
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 230/380 (60%), Gaps = 21/380 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFS 466
D T + ++ AC +L+ K VH H+ R S +V+ N ++ MY +C A
Sbjct: 198 DGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA--NALVDMYVKCGVPVLARL 255
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F + +DL +W MI G+ +G G +A+ F++ +QAG++PD+ FI + ACS G
Sbjct: 256 LFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGL 315
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ EG F M + + P ++HY IVD+L +G L A +FI+ MP+EPD +W L+
Sbjct: 316 LDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALL 375
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-SELAKEKENKKLASQ---- 641
+ CR+H +++L ++ AE V +L+P E + ++ N +E K +E KKL +
Sbjct: 376 SGCRIHHDVKLAEKVAEHVFELEP----ENTGYYVLLANTYAEAEKWEEVKKLRQKIGRR 431
Query: 642 --------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
+ +EV+SKVH + AG++SHP+ KI L++ LR++MKE GY P+TR+ L +
Sbjct: 432 GLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINA 491
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
D KE AL HSE+LA++ G+L+ P IR+ KNLRVCGDCH K ISK +GRE+++
Sbjct: 492 DSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVL 551
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD+ RFHHFKDG+C CR +W
Sbjct: 552 RDSNRFHHFKDGVCCCRGFW 571
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+EG EAI + ++++ +S D+ T + ++ AC +LE K VH ++ +
Sbjct: 76 REGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIF 135
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY++C SM+DA SVF M +D+ SW+TMI G++KN L +A+ +F
Sbjct: 136 VCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE- 194
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+KPD + AC++L + G +H + G + ++VDM G
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRN--GFFSDQQVANALVDMYVKCGVPVL 252
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A + +P + D+ W ++ MHG
Sbjct: 253 ARLLFDMIPTK-DLITWTVMIAGYGMHG 279
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++QAC + + +AVH + + + N +L MY++C +D A VF M+ R
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ +W ++I +A+ GL ++A+ +F + + G+ PD V AC+ G + G
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK-DVH 122
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ ++ + ++ +++DM G +++A +MP++ D+ W ++
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMI 172
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 235/402 (58%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ G +A + + + ISV P S ++ AC + E K +H V L
Sbjct: 210 ISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLG 269
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C + A +F M +D+ SW ++I G A++G E+A+ ++
Sbjct: 270 YESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYD 329
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ AG+KP++ F+G+ ACS G V +G F +M +D+GI PS++HY ++D+ +
Sbjct: 330 EMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRS 389
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL---DPSRL---- 613
G+LDEA I MP+ PD W L++ C+ HGN ++ R A+ + L DPS
Sbjct: 390 GHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLS 449
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + AG+ +L E KK + +++ H + AG+TSHP D+I L+R
Sbjct: 450 NIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMR 509
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M++ GY P+T VLHD+DQ+ KE L HSERLAV++GLL + IRI+KNLR
Sbjct: 510 ELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLR 569
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ LK+IS I RE+ +RDAKR+HHFKDG CSC D+W
Sbjct: 570 VCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L Y +C + DA +F + RD +W +++T + A+ I G
Sbjct: 42 NTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFH 101
Query: 509 PDDQIFIGVFSACSALG 525
PD +F + AC+ LG
Sbjct: 102 PDHFVFASLVKACANLG 118
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS--TYNGILKMYSECDSMDDAFSVFS 469
F+ L++AC + L + H LSP + ++ MY++ D +VF
Sbjct: 106 VFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFD 165
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+++ + SW TMI+G+A++G +A +F Q
Sbjct: 166 SISSLNSISWTTMISGYARSGRKFEAFRLFRQ 197
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S L ++ ++ Y+ +AF +F R+L +W +I+G ++G G DA +F
Sbjct: 167 ISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLF 226
Query: 500 SQFKQAGLKPDDQIFI-GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH----YVS-- 552
+ + G+ D + + V AC+ L +E + +G+V ++ + ++S
Sbjct: 227 VEMRHEGISVTDPLVLSSVVGACANLA-------LWELGKQMHGVVITLGYESCLFISNA 279
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++DM L A +M DV W ++ HG E
Sbjct: 280 LIDMYAKCSDLVAAKYIFCEM-CRKDVVSWTSIIVGTAQHGQAE 322
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 230/405 (56%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G ++A+ + ++ I+ L T L+ AC AL+ H +
Sbjct: 385 ISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGF 444
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N I+ MYS+C + + +F M RD+ SW+TMI G+ +GL +A+ +F +
Sbjct: 445 TNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQE 504
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ GLKPDD I V SACS G V EG F SMS+++ I P M HY+ +VD+L G
Sbjct: 505 LQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAG 564
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------- 610
LDEA FI++MP P+V +W L+ CR H N+E+G++ ++ ++ L P
Sbjct: 565 NLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSN 624
Query: 611 --SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S + A + + + KK + +E+ +H + G SHP++ I
Sbjct: 625 IYSSVGRWDDAAYI----RSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINK 680
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ L QMK+ GY ++ FVLHD+++E KE+ LL HSE++A++ G+L++ + I + K
Sbjct: 681 KLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTK 740
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCHSA+K I+ + RE+ +RDA RFHHFKDG+C+C+D+W
Sbjct: 741 NLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +++AC L+ K +H H+ + L + N ++ MY++C MD+A M
Sbjct: 314 TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM 373
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D S+ +I+G +NG E A+ IF Q + +G+ P + I + ACS L + G
Sbjct: 374 IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG- 432
Query: 532 LHFESMSKDYGIVPSMKHYVS----IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ Y +V + S I+DM G + + E ++M D+ W ++
Sbjct: 433 ----TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ-NRDIISWNTMII 487
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
+HG C E + S E GL P + + +A
Sbjct: 488 GYGIHG------LCVEAL-----SLFQELQALGLKPDDVTLIA 519
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC +AL+ + +H H L + + +L MY++C + A ++F+++
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168
Query: 472 T--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ +RD+ +W+ MI F+ + L + +Q +QAG+ P+ + +
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSIL 217
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ G A AL + KA+H + R V +L MY++C + A +F+ +
Sbjct: 212 TLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTV 271
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+++ W MI G+ + DA+ ++ GL P + AC+ L D+ G
Sbjct: 272 NKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRG 331
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
LH + + ++ + S++ M G +D A+ F+++M + D + +++ C
Sbjct: 332 KKLHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGC 388
Query: 590 RMHGNLE 596
+G E
Sbjct: 389 VQNGYAE 395
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 263/474 (55%), Gaps = 46/474 (9%)
Query: 322 YQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ 381
+QW R Y N Y SGN+ +A ++ + + D + ++
Sbjct: 173 FQWAVDRDLYSWNTLIAAYVG-SGNMS---LAKELFDGMRERDVVSWST----------I 218
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV----- 436
+ G V+ G EA++ + + + T + AC + AL++ K +H ++
Sbjct: 219 IAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEI 278
Query: 437 ---ERLLSPLRVSTYNGILKMYSECDSMDDAFSVF-SNMTERDLTSWDTMITGFAKNGLG 492
ERLL+ I+ MY++C ++ A VF + ++ + W+ MI GFA +G+
Sbjct: 279 KMNERLLA--------SIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMP 330
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+A+++F Q K + P+ FI + +ACS V EG L+F M DY I P ++HY
Sbjct: 331 NEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGC 390
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
+VD+L +G L EA + I MPM PDV +W L+N CR++ ++E G R I++ +DP+
Sbjct: 391 MVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNH 450
Query: 613 L-------NEKSKAGLVPVNASELAKEK-----ENKKLASQNLLEVRSKVHEYRAGDTSH 660
+ N S +G N + + +EK + KK+ + +E++ H++ GD SH
Sbjct: 451 IGCHVLLSNIYSTSG--RWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSH 508
Query: 661 PETDKIYALIRGLRAQMKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSP 719
P++ +IY+ + + ++K AGY+PE +LHDI D+E KE AL HSE+LA++ GL+++
Sbjct: 509 PQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTA 568
Query: 720 ARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIRI+KNLRVCGDCH A K ISK+ R +I+RD R+HHF+DG+CSC+DYW
Sbjct: 569 NGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 102/258 (39%), Gaps = 35/258 (13%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+F ACG+ ++E + V H ++ V N ++ MY + + ++ VF
Sbjct: 117 SFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWA 176
Query: 472 TERDLTSWDTM-------------------------------ITGFAKNGLGEDAVDIFS 500
+RDL SW+T+ I G+ + G +A+D F
Sbjct: 177 VDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFH 236
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ Q G KP++ + +ACS L + +G + K I + + SI+DM
Sbjct: 237 KMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKG-EIKMNERLLASIIDMYAKC 295
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++ A + ++ V +W ++ MHG + + + EQ+ +++
Sbjct: 296 GEIESASRVFFEHKVKQKVWLWNAMIGGFAMHG---MPNEAINVFEQMKVEKISPNKVTF 352
Query: 621 LVPVNASELAKEKENKKL 638
+ +NA E KL
Sbjct: 353 IALLNACSHGYMVEEGKL 370
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 223/376 (59%), Gaps = 17/376 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
T S ++ AC A+ K +H +V R S Y N ++ MYS+C +D A VF
Sbjct: 480 TISCILMACAHLAAIRIGKQIHAYVLRH-HQYDSSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+M+++ SW +M+TG+ +G G +A+DIF + ++AG PDD F+ V ACS G V
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 598
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ +F+SMS DYG+ P +HY +D+L G LD+A + ++ MPMEP VW L++
Sbjct: 599 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR+H N+EL + + +++ N+ S + + A+ L K+ KK
Sbjct: 659 CRVHSNVELAEHALNKLVEMNAE--NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 716
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ ++ + + GD SHP + +IYAL+ L ++K GY+PET F LHD+D+E
Sbjct: 717 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 776
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K L+ HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+++RD
Sbjct: 777 KNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 836
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFK+G CSC YW
Sbjct: 837 RFHHFKNGSCSCGGYW 852
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ ACG KA+ + K VH + R + L V N ++ Y++C M++A VF
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ M +D+ SW+ M+ G++++G + A ++F ++ + D + V + S G
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
E + F M G +P+ +S++ S G + +E
Sbjct: 346 EALNVFRQMIFS-GSLPNCVTIISVLSACASLGAFSQGMEI 385
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 42/252 (16%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR------- 444
E L + + S LP T ++ AC A + +H + ++ L L
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405
Query: 445 --VSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ YN ++ MYS+C S A S+F + + ER++ +W MI G A+ G DA+ +F
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465
Query: 501 QF--KQAGLKPDDQIFIGVFSACSALGDVVEG-------MLHFESMSKDYGIVPSMKHYV 551
+ + G+ P+ + AC+ L + G + H + S Y + +
Sbjct: 466 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL---- 521
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
++M G +D A + M + + W +M MHG R +E ++ D
Sbjct: 522 --INMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHG------RGSEALDIFDKM 572
Query: 612 RLNEKSKAGLVP 623
R KAG VP
Sbjct: 573 R-----KAGFVP 579
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+K+G++ AI V + + +D T +++ACG+ + A H + V
Sbjct: 93 IKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNV 152
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MYS C S+++A +F +T+R D+ SW+++++ K+ A+D+FS+
Sbjct: 153 FICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM 212
Query: 503 ------KQAGLKPDDQIFIGVFSACSALGDV 527
K + D + + AC +L V
Sbjct: 213 TLIVHEKPTNERSDIISIVNILPACGSLKAV 243
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 241/401 (60%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+ +EA+ + ++++ T+S L+ +C LE+ K +H H+ +
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N +L MY++ S+ DA VF + + D+ S ++M+ G+A++GLG++A F +
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P+D F+ V +ACS + EG H+ + + Y I P + HY +IVD+LG G
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGK-HYFGLMRKYNIEPKVSHYATIVDLLGRAG 426
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LD+A FIE+MP+EP V +W L+ +MH N E+G A+ V +LDPS +
Sbjct: 427 LLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLAN 486
Query: 622 VPVNAS---------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +A ++ K+ KK + + +EV + VH + A D +HP+ +KI+ +
Sbjct: 487 IYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEK 546
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++KE GY+P+T VL +DQ+ KE L HSE+LA+S LL++P + IRIMKN+RV
Sbjct: 547 LNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRV 606
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA+K +S +V RE+I+RD RFHHF DG CSC DYW
Sbjct: 607 CGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K + VL L++ + D ++ L++ C L+E K VH HV + N +
Sbjct: 56 KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY+ C S++ A +F M RD+ SW +MITG+A+N DA+ +F + G +P++
Sbjct: 116 LFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ C + G + YG ++ S+VDM GYL EA+ +
Sbjct: 176 FTLSSLVKCCGYMASYNCGR-QIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFD 234
Query: 572 KMPMEPDVDVWEKLM 586
K+ + +V W L+
Sbjct: 235 KLGCKNEVS-WNALI 248
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S L++ CG + + +H + V + ++ MY+ C + +A VF +
Sbjct: 177 TLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
++ SW+ +I G+A+ G GE+A+ +F + ++ G +P + + + S+CS++G + +G
Sbjct: 237 GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGK 296
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
LH M +V + + +++ M +G + +A + +K+
Sbjct: 297 WLHAHLMKSSQKLVGYVGN--TLLHMYAKSGSIRDAEKVFDKL 337
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 237/404 (58%), Gaps = 9/404 (2%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + G V G ++A+++ + + + T++ + ACG+ +L+ K +H H+ +
Sbjct: 399 MVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQ 458
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S N ++ MY+ C ++ +A +F M D SW+ MI+ ++G G +A+++
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALEL 518
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+ PD F+ V +AC+ G V EG +FESM +D+GI+P HY ++D+LG
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLG 578
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G + EA + I+ MP EP +WE +++ CR G++ELG A+ + ++ P
Sbjct: 579 RAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYIL 638
Query: 613 -LNEKSKAG--LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N S AG + +L +++ KK + +E +KVH + GDT HPE K+Y
Sbjct: 639 LSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKF 698
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + A+M++ GY+P+T+ VLHD++ KE L AHSERLAV GLL P A + ++KN
Sbjct: 699 LEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKN 758
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+ + +SK VGRE+++RD +RFHHFKDG CSC +YW
Sbjct: 759 LRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 51/277 (18%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V G V EA E+ + + + +D TF+ ++ AC +A K+VH + RL
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 440 ---LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT--------------- 481
+ + N ++ +YS+C ++ A +F NM +D+ SW+T
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAV 384
Query: 482 ----------------MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
M++G+ G EDA+ +F++ + +KP D + G SAC LG
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELG 444
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA-LEFIEKMPMEPDVD--V 581
+ G LH + G S +++ M G + EA L F+ + P++D
Sbjct: 445 SLKHGKQLHGHLV--QLGFEGSNSAGNALITMYARCGAVKEANLMFL----VMPNIDSVS 498
Query: 582 WEKLMNLCRMHGN----LELGDRCAEIVEQLDPSRLN 614
W +++ HG+ LEL DR + E + P R++
Sbjct: 499 WNAMISALGQHGHGREALELFDR--MVAEGIYPDRIS 533
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 445 VSTYNGILKMYSECDSMD---DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ +Y +C++++ DA V M ++D +W TM+ G+ + G D S
Sbjct: 194 LSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG---DVGAARSV 250
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
F++ +K D ++ + S G VVE F M
Sbjct: 251 FEEVDVK-FDVVWNAMISGYVHSGMVVEAFELFRRM 285
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 229/378 (60%), Gaps = 23/378 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFS 469
T S + C + AL+ + VH+ V + SPL T G ++ MY +C ++D + +F
Sbjct: 199 TLSSALLGCSELSALQLGRQVHQLVCK--SPLCDDTTAGTSLISMYCKCGVLEDGWKLFV 256
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ RD+ +W+ MI+G+A++G G+ A+ +F + + G+KPD F+ V AC+ G
Sbjct: 257 QVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDL 316
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ +F SM+KDYG+V HY +VD+LG G L EA++ IEKMP +P V+ L+ C
Sbjct: 317 GVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGAC 376
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV-----------NASELAKEKENKKL 638
R+H N E+ + ++ + LDP+ S G V + + + + K ++ K+
Sbjct: 377 RIHKNTEMAEFASQKLLNLDPA-----SATGYVQLANVYAATKRWDHVARVRKSMKSCKV 431
Query: 639 ASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+ +EV+S H++R+GD HPE I+ ++ L +MK AGY+P+ F LHD+ +
Sbjct: 432 VKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGE 491
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE+ LL HSE+LA+++GL+ P PIR+ KNLRVCGDCH A+K IS+I RE+I+RD
Sbjct: 492 EQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRD 551
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHFKDG CSC DYW
Sbjct: 552 TTRFHHFKDGHCSCADYW 569
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 85/217 (39%), Gaps = 39/217 (17%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSV 467
D P+++ ++ + +++A+ + L+ P + V T+N ++ Y EC +D A +
Sbjct: 68 DTPSWNTMITGFAQNQQMDKARDLF-----LIMPTKNVVTWNAMISGYVECGDLDSALKL 122
Query: 468 FSN-------------------------------MTERDLTSWDTMITGFAKNGLGEDAV 496
F M E++L +W+ MI G+ +N ED V
Sbjct: 123 FEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGV 182
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F G++P+ CS L + G + + K + S++ M
Sbjct: 183 KLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKS-PLCDDTTAGTSLISM 241
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L++ + ++P DV W +++ HG
Sbjct: 242 YCKCGVLEDGWKLFVQVPRR-DVVTWNAMISGYAQHG 277
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
G +K + K E ++ P VS YN +L Y +M+ A + F +M +D SW+
Sbjct: 15 GMSKKRGKLKEAQELFVKIPEPDAVS-YNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWN 73
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
TMITGFA+N + A D+F + + + G + C GD+ + FE
Sbjct: 74 TMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISG-YVEC---GDLDSALKLFEKAP-- 127
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
S+ + +++ G + A EKMP E ++ W ++
Sbjct: 128 ---FKSVVAWTAMITGYMKLGRIGLAERLFEKMP-EKNLVTWNAMI 169
>gi|357501247|ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 415
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/389 (40%), Positives = 229/389 (58%), Gaps = 51/389 (13%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
++EG V + +E++G Q D F L++ C D K+LE K VHE + R
Sbjct: 78 FLQEGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ +Y +C S+ DA VF M +R++ SW+ MI G+ NGLG D + +F Q +Q
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMRQ 193
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PD++ F V + C+ + V EGM +HY+ +V++ G G L+
Sbjct: 194 QGIVPDEETFALVLAVCALVDGVEEGM----------------EHYLGVVNIFGCAGRLN 237
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA EFIE + +HG+LE D E++ +DPS+ K L
Sbjct: 238 EAHEFIENI-----------------IHGDLEREDCADELLTVIDPSKAAADDKVPL--- 277
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+ KK ++ N++E +++V EYR E D+ +RGL QM+EAGY+P
Sbjct: 278 --------PQRKKQSAINMMEEKNRVSEYRCNMPYEEEDDE---KLRGLTGQMREAGYVP 326
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
+TR+VLHDID+E KE+AL HSE LA+++GL+S+P R +RI+KNLR+CGDCH+A+KI+S
Sbjct: 327 DTRYVLHDIDEEEKEKALQYHSECLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMS 386
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIVGRELI+RD KRFHHFKDG CSC DYW
Sbjct: 387 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 415
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 234/392 (59%), Gaps = 16/392 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E L L + ++ +P T ++ ACG ALE + +H ++E + V ++
Sbjct: 256 ESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALI 315
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C S++DA VF + ++D+ +W++MI G+A +G + A+ +F + + G KP D
Sbjct: 316 DMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDI 375
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
FIG+ SAC G V EG F M YGI P ++HY +V++LG G+L+EA ++
Sbjct: 376 TFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKN 435
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE---- 628
M + D +W L+ CR+H N++LG+ A+ + +D N + L + A+
Sbjct: 436 MTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFL--VDQKLANSGTYVLLSNMYAATGNWE 493
Query: 629 -------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
L KE +K + +EV +KVHE+ AG+ HP++ +IY ++ + + +K G
Sbjct: 494 GVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARG 553
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y P+T VLHD+ +E KE++L HSE+LA++ GL+S+ ++I+KNLRVC DCH+ +K
Sbjct: 554 YTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMK 613
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+IS+I GR++++RD RFHHF+DGLCSC DYW
Sbjct: 614 MISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L YS+ +D A S+F M ERD+ W+ MI G+A++G+ +++ +F + A P+
Sbjct: 213 MLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPN 272
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + V SAC LG + G S ++ GI ++ +++DM G L++A
Sbjct: 273 EVTVLAVLSACGQLGALESGRW-IHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVF 331
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+++ + DV W ++ MHG
Sbjct: 332 DRIR-DKDVVAWNSMIVGYAMHG 353
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 237/403 (58%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G E ++ + I +FS +M AC L K +H ++ R
Sbjct: 373 IAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 432
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + ++ MY++C ++ A +F M RD+ SW MI G A +G DA+++F Q
Sbjct: 433 DENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQ 492
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G++P+ F+ V +ACS G V E +F SM+ D+GI P ++HY ++ D+LG G
Sbjct: 493 MKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAG 552
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA +FI MP+ P VW L++ CR+H N+++ ++ A + ++DP N + L
Sbjct: 553 RLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPK--NTGAYILL 610
Query: 622 VPVNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ ++ E AK + + +K + + +EVR+KV+ + AGD SHP +KI +
Sbjct: 611 ANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAM 670
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L M++ GY+P+T V HD+++E K+ + +HSERLA+ G++++PA IR+ KNL
Sbjct: 671 EVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNL 730
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K ISKIVGRE+++RD RFHHFK+G CSC DYW
Sbjct: 731 RVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ + + + K +H R V + ++ MY++C + D++ VF+ +
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
TERD SW+++I G +NGL ++ + F Q A +KP F + AC+ L + G
Sbjct: 362 TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 421
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++++ G ++ S+VDM G + A + ++M + D+ W ++ C +
Sbjct: 422 QLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCAL 479
Query: 592 HGN 594
HG+
Sbjct: 480 HGH 482
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+K S S+D +F M E+DL SW+T+I G A+NGL + + + + A LKPD
Sbjct: 241 IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300
Query: 512 QIFIGVFSACSALGDVVEGM-LH------------------FESMSKDYGIVPSMKHYV- 551
V + D+ +G +H + +K +V S + +
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360
Query: 552 ----------SIVDMLGSTGYLDEALEFIEKMPM---EPDVDVWEKLMNLCRMHGNLELG 598
SI+ G DE L+F +M M +P + +M C L LG
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+YS + + D+ +F+ + +W ++I + +GL ++ F +GL PD +
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 514 FIGVFSACSALGDV 527
F V AC+ L D+
Sbjct: 111 FPSVLKACAMLMDL 124
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 235/407 (57%), Gaps = 16/407 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G +A+E+L + E+ C + T S + AC AL K +H + R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALR 505
Query: 439 L---LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
PL VS N ++ MY++C + DA VF NM E++ +W +++TG+ +G GE+A
Sbjct: 506 NQQNAVPLFVS--NCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEA 563
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ IF + ++ G K D + V ACS G + +GM +F M D+G+ P +HY +VD
Sbjct: 564 LGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVD 623
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+LG G L+ AL IE+MPMEP VW L++ CR+HG +ELG+ A+ + +L +
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGS 683
Query: 616 KSKAGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
+ + NA L + K KK + +E + GD +HP +I
Sbjct: 684 YTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
Y ++ ++K+ GY+PET F LHD+D E K++ L HSE+LA+++G+L++P A IRI
Sbjct: 744 YQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRI 803
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A +S+I+ E+I+RD+ RFHHFK+GLCSC+ YW
Sbjct: 804 TKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVS 446
G+ + + L+ + D TF + +ACG+ ++ + H V +S + V
Sbjct: 106 GRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVG 165
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QA 505
N ++ MYS C S+ DA VF M D+ SW+++I +AK G + A+++FS+ +
Sbjct: 166 --NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEF 223
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G +PDD + V C+++G G F + ++ +M +VDM G +DE
Sbjct: 224 GFRPDDITLVNVLPPCASVGTRSLGK-QFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDE 282
Query: 566 ALEFIEKMPMEPDVDVWEKLM 586
A MP++ DV W ++
Sbjct: 283 ANTVFSNMPVK-DVVSWNAMV 302
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+ V + I + T ++ C AL K +H + +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 442 PLRVS-------TYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLG 492
LR + N ++ MY++C +D A ++F +++ ERD+ +W MI G++++G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 493 EDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
A+++ S+ + +P+ AC++L + G +H ++ VP
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPL--- 513
Query: 550 YVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+VS ++DM G + +A + M ME + W LM MHG
Sbjct: 514 FVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHG 558
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 52/193 (26%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ---- 504
N ++ MY++ MD+A +VFSNM +D+ SW+ M+ G+++ G EDAV +F Q ++
Sbjct: 268 NCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIK 327
Query: 505 -------------------------------AGLKPDDQIFIGVFSACSALGDVVEGM-L 532
+G+KP++ I V S C+++G ++ G +
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 533 HFESMSK----------DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PMEPDVDV 581
H ++ D +V + ++DM +D A + + P E DV
Sbjct: 388 HCYAIKYPMDLRKNGHGDENMVIN-----QLIDMYAKCKKVDIARAMFDSLSPKERDVVT 442
Query: 582 WEKLMNLCRMHGN 594
W ++ HG+
Sbjct: 443 WTVMIGGYSQHGD 455
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 423 AKALEEAKAVHEHVERLLS--PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD--LTS 478
K + + K +H+ +LLS L ++ + ++ Y + A S+ D +
Sbjct: 38 CKTISQVKLIHQ---KLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYH 94
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W+++I + NG + F PD+ F VF AC + V G ++S
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD-SSHALS 153
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + ++ ++V M G L +A + ++MP+ DV W ++
Sbjct: 154 RVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVW-DVVSWNSII 200
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G +A+++ ++ + D T ++ A D ALE A+ V VER
Sbjct: 201 MIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFVEREG 260
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+ N ++ ++C +D A +VF M +R + SW ++I A G G++AV +F
Sbjct: 261 IGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFE 320
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K AG+ PDD FIGV +ACS G V EG +F++M +YGI P ++HY +VDM G
Sbjct: 321 EMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRA 380
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++ A+EF+ MP++P+ +W L++ CR HG LELG+ + P+ +E +
Sbjct: 381 GMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPA--HEANYIM 438
Query: 621 LVPVNA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L V A SE+ +E KK+ +++E+ +VHE+ AGD SHP+ IY +
Sbjct: 439 LSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRM 498
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ G+I T VL D+D+E KE AL HSE+LA++ LL +P +R++KN
Sbjct: 499 VEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKN 558
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+A+K IS++ RE+++RD RFH FKDG CSC+D+W
Sbjct: 559 LRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSEC---DSMDDAFS 466
TF L++AC + + H L Y N ++ MYS C + DA +
Sbjct: 128 TFPFLLKACAALPGSPDV-GLQAHAAALKFGFATDQYVSNTLIHMYS-CFGGGFLGDARN 185
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M + +W MI G+ + GL DAVD+F + + G++ D+ IGV +A + LG
Sbjct: 186 VFDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLG- 244
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+E + GI S+ +++D L G +D A+ E M + V W ++
Sbjct: 245 ALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGM-QQRSVVSWTSVI 303
Query: 587 NLCRMHGNLELGDRCAEIVEQL 608
+ M G G + E++
Sbjct: 304 DALAMEGR---GKEAVRVFEEM 322
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 252/469 (53%), Gaps = 30/469 (6%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMM-----------ASQVLNNCKHEDDFAEASRSS 373
+Q R + G+ +S + ++N ++ A +V + H D F+ S +
Sbjct: 104 EQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMIT 163
Query: 374 QNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH 433
E L EA+E+ + + I T + ++ AC + AL+ K +H
Sbjct: 164 ACTENCELL----------EALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIH 213
Query: 434 EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE 493
++ V +L MY++C S++ + VF+ M R+ SW MI A++G G+
Sbjct: 214 SRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGD 273
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
+A+++F + G+ D FI V ACS G + E + F SM +DY I P+ HY
Sbjct: 274 EALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRA 333
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
+D +G G L +A E I MP P+ W+ L+N CR+H E + AE++ +L P
Sbjct: 334 LDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDS 393
Query: 614 NEKSKAGLV---------PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
+ G V + + ++ KK+ ++ +EV++KVHE+ AGD +HP D
Sbjct: 394 MAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRD 453
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+I + L +M+EAGY+P T+ VLH +++E KE+ + HSE+LA++ GL+++P P+
Sbjct: 454 EILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPL 513
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLRVC DCH+A K+I+KI+ R +++RD RFHHF+DG CSC+DYW
Sbjct: 514 LIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
+EE + +H + NG++ MY++C +D+A ++F+ + ER + SW MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 486 FAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
+A +G G++A+ +F + + G ++P+ F GVF+AC + D+ +G +++ G +
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGR-EIHALAMASGEL 119
Query: 545 PSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
S + ++++M G L+EA + + M PD W ++ C
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 9/201 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
TF+ + ACG + LE+ + +H + L+ S N +L MY C S+++A VF
Sbjct: 89 TFTGVFNACGVIEDLEQGREIHA-LAMASGELKSSNAILENALLNMYVRCGSLEEARKVF 147
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M D SW +MIT +N +A+++F + G+ P V +AC+ G +
Sbjct: 148 DTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALK 207
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G S G S+ +++DM G L+ + + M V W ++
Sbjct: 208 VGK-QIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVS-WTAMIAA 265
Query: 589 CRMHGNLELGDRCAEIVEQLD 609
HG GD E+ ++++
Sbjct: 266 LAQHGQ---GDEALELFKEMN 283
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/381 (41%), Positives = 230/381 (60%), Gaps = 15/381 (3%)
Query: 401 LEKQCISVDLP----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKM 454
L KQ + DL TFS +++ CG++ LE K +H L + S++ G ++ +
Sbjct: 98 LFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLC--LKTSYDSSSFVGSSLISL 155
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+C ++DA+ VF + R+L W+ M+ A++ E A D+F Q + G+KP+ F
Sbjct: 156 YSKCGVIEDAYLVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITF 215
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ V ACS G V +G +FE M K+YGI P +HY S+VD+LG G L +A+ I+KMP
Sbjct: 216 LCVLYACSHAGLVEKGQFYFELM-KEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMP 274
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV--PVNASELAKE 632
MEP VW L+ CR+HG+ EL A+ V +L P S AG A ++ ++
Sbjct: 275 MEPTESVWGALLTGCRIHGDTELASFVADRVFELGPV----SSAAGRYEEAARARKMLRD 330
Query: 633 KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHD 692
+ KK + +E +++H + AGD SHP T IY + L +M+ AGYI +T FVL +
Sbjct: 331 QGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQE 390
Query: 693 IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELI 752
+D E K + + HSERLA++ GL+S P PIR+MKNLRVCGDCH+A+K +SK GR +I
Sbjct: 391 VDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTII 450
Query: 753 IRDAKRFHHFKDGLCSCRDYW 773
+RD RFH F+DG CSCRDYW
Sbjct: 451 VRDNNRFHRFEDGNCSCRDYW 471
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F +ACG + ++VH + V + ++ MY++C + DA +F M
Sbjct: 12 IFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDARKMFDEM 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGD 526
+R++ SW MI G+++ G E+A+ +F Q L +D F V C LG
Sbjct: 72 PDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGK 131
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G L ++ V S S++ + G +++A ++P+ ++ +W ++
Sbjct: 132 QIHG-LCLKTSYDSSSFVGS-----SLISLYSKCGVIEDAYLVFHEIPIR-NLGMWNAML 184
Query: 587 NLCRMHGNLE 596
C H + E
Sbjct: 185 IACAQHAHTE 194
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 275/523 (52%), Gaps = 35/523 (6%)
Query: 266 NGFNSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWD 325
N N+ S S SF G+ + H A+ +G+ + FY + G
Sbjct: 149 NHLNAAGPSASACSFLGSHV-----HALAVKAGAAGDLFVRNALVHFYGVSGDVGAM--- 200
Query: 326 QSRRQYQQNPNEGQYQSY----SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTL 379
RR + + P ++ +G ++ GMM A +V + D+ + ++
Sbjct: 201 --RRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWST--------- 249
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G VKE +++ A+ V + +Q + + + A LE K VH V+R
Sbjct: 250 -LVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRS 308
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P+ ++ ++ MY++C + A VF M RD+ +W+ MI G A +GLG DAV++F
Sbjct: 309 GMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELF 368
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+F GL P + F+GV + CS G V EG +F+ + + Y I P M+HY +VD+LG
Sbjct: 369 ERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGR 428
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G + EA+E IE M + PD +W +++ C+ HG ++LG + +LDP+
Sbjct: 429 AGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLL 488
Query: 620 GLVPVNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A++ + +E +KL S +L+E KVH++ GDT H ++ +IY +
Sbjct: 489 SGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTL 548
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++ EAGY+P+ VLHDI +E K A+ HSERLA+++G + A +PIRI+KNL
Sbjct: 549 DMINKRLTEAGYVPDVSSVLHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNL 608
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH K+++ + RE+I+RD RFHH K+G CSC DYW
Sbjct: 609 RVCGDCHEFSKMVTMVFQREIIVRDGSRFHHMKEGKCSCLDYW 651
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 246/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G +EA++V + + V++ T+ + A +++ + +H V +
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ +Y++ S+ DA+ F++M+ER++ SW+ MITG++++G G +A+ +F +
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEE 756
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G+ P+ F+GV SACS +G V EG+ +FESM K + +VP +HYV +VD+LG G
Sbjct: 757 MKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAG 816
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LD A+E+I++MP+ D +W L++ C +H N+E+G+R A + +L+P S
Sbjct: 817 QLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISN 876
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ S+ + + +L K++ KK ++ +EV++ VH + AGD HP T++IY I
Sbjct: 877 IYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGH 936
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + E GY+ ++ +L++ +Q K+ HSE+LA++ GLLS PIR+MKNLRV
Sbjct: 937 LNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRV 996
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ +K +SKI R +I+RDA RFHHF G+CSC+D+W
Sbjct: 997 CNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLV++G A+E+ +++ C+ D T + L+ AC AL + +H H +
Sbjct: 334 ISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGM 393
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +L +YS+C ++ A F ++ W+ M+ + + D+ +IF Q
Sbjct: 394 SADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ 453
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLG 558
+ G+ P+ + + C++LG + G +H + + + YV ++DM
Sbjct: 454 MQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGF----QLNVYVCSVLIDMYA 509
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L AL + ++P E DV W ++
Sbjct: 510 KYGQLALALRILRRLP-EDDVVSWTAMI 536
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
QLD L ++ +++ G++ Q T+ +++ C AL + +H HV +
Sbjct: 440 QLDNLSDSFEIFRQMQMEGMIPNQ------FTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V + ++ MY++ + A + + E D+ SW MI G+ ++ + +A+ +F
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G++ D+ F SAC+ + + +G +H +S + +G S+ + +++ +
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYAR 611
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + EA EK+ + ++ W L++
Sbjct: 612 CGRIQEAYLAFEKIGDKNNIS-WNSLVS 638
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + GL + G +EAI + + I S ++ A + E + +H V +
Sbjct: 230 VAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIK 289
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
NG++ +YS + A +FS M RD S++++I+G + G + A+++
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFES----MSKDYGIVPSM------ 547
F++ ++ LKPD + SAC+++G + +GM LH + MS D + S+
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409
Query: 548 --------KHYVS-----IV---DMLGSTGYLD---EALEFIEKMPME---PDVDVWEKL 585
K +++ IV ML + G LD ++ E +M ME P+ + +
Sbjct: 410 CADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 586 MNLCRMHGNLELGDR 600
+ C G L LG++
Sbjct: 470 LRTCTSLGALYLGEQ 484
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 412 TFSQLMQAC-GDAKALEEAKAVHEHVERL---LSPLRVSTYNGILKMYSECDSMDDAFSV 467
TF+ +++AC G A K VH SPL N ++ +YS+ ++ A V
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL---VANLLIDLYSKNGYIESAKKV 217
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA---- 523
F+ + +D+ +W MI+G ++NGL E+A+ +F + + P + V SA +
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 524 -LGD----------------VVEGMLHFESMSKDY----GIVPSMK-----HYVSIVDML 557
LG+ V G++ S S+ I +M Y S++ L
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGL 337
Query: 558 GSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELG 598
G+ D ALE KM ++PD L++ C G L G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 62/119 (52%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ EA+++ +E + I D F+ + AC +AL + + +H
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S N ++ +Y+ C + +A+ F + +++ SW+++++G A++G E+A+ +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 24/240 (10%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
+ N+ + +Q +++GK K I+++ +E++ + + + L++ C + +L E +
Sbjct: 22 ATNSHSFDQTTLHMEQGKSKR-IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRL 80
Query: 433 HEHVERLL---SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
H + + PL + + ++ Y A VF + R + SW+ MI F
Sbjct: 81 HCRISKSGFDGEPLLI---DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMK 548
+F + G+ P+ F GV AC GD+ + S + YG S
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPL 196
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW--------------EKLMNLCRMHGN 594
++D+ GY++ A + + M+ D+ W E ++ C MH +
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 239/405 (59%), Gaps = 15/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+++ L+++ + + T++ ++ A AL+ + VH HV R
Sbjct: 651 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 710
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
P V N ++ MYS+C S+ + +F +M ER + SW+ M+ G++K+GLG +AV++F
Sbjct: 711 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 770
Query: 502 FKQAG-LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K+ +KPD F+ V S CS G G+ + +E +++ G P ++HY +VD+ G
Sbjct: 771 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 830
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G ++EA EFI+KMP EP +W L+ CR+H N+ +G+ A + +++ N +
Sbjct: 831 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE--NAGNYV 888
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS EL KEK K ++ +E+ +H + A D SHP ++++A
Sbjct: 889 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 948
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+R L ++KEAGY+PE VL+D+D E KE+ L HSE+LA++ GL+ +P P+RI+K
Sbjct: 949 KVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIK 1008
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH+ K +S++ GRE+ +RD RFHH G CSC DYW
Sbjct: 1009 NLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L ++KEA+ +G+ Q + V+ + ++ C A+ E + VH H+ +
Sbjct: 452 LKTLCSNRQLKEALLEMGI---QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCY 508
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ +Y++C + DA V M ER++ SW MI+G+++ G +A+ +F +
Sbjct: 509 EPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVE 568
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+G P++ F V ++C++ LG + ++ ++ + + V S S++DM
Sbjct: 569 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLV-IKTSFESHIFVGS-----SLLDM 622
Query: 557 LGSTGYLDEALEFIEKMPMEPDV 579
G + EA + +P E DV
Sbjct: 623 YAKAGKICEARRVFDGLP-ERDV 644
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 394 AIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
A E L L + +S P TF+ ++ +C + + + +H V + + +
Sbjct: 559 ASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSS 618
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L MY++ + +A VF + ERD+ S +I+G+A+ GL E+A+D+F + ++ G++ +
Sbjct: 619 LLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSN 678
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ V +A S L + G +H + +++ S++DM G L +
Sbjct: 679 YVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRI 736
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ MP E V W ++ HG LG E+ + +
Sbjct: 737 FDSMP-ERTVISWNAMLVGYSKHG---LGREAVELFKLM 771
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 247/405 (60%), Gaps = 13/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA++ + L+ +D TFS ++ AC ALE +H R
Sbjct: 659 MISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSH 718
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C +D A VF +M++++ SW++MI+G+A++GLG A++IF
Sbjct: 719 LESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFE 778
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +++G PD F+ V SACS G V G+ +FE M +DYGI+P ++HY ++D+LG
Sbjct: 779 EMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRA 837
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLC---RMHGNLELGDRCAEIVEQLDPSR----- 612
G LD+ E++++MPM+P+ +W ++ C + ++LG + ++ +L+P
Sbjct: 838 GELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYV 897
Query: 613 LNEKSKAGLV----PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L+ K A + A K KK A ++ + + VH + AGD SHP T +IY
Sbjct: 898 LSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYE 957
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +++ AGY+P T +VLHD+++E KEE L HSE+LAV+ L S + PIRIMK
Sbjct: 958 KLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMK 1017
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A + IS+IVGR++I+RD+ RFHHFKDG CSC DYW
Sbjct: 1018 NLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 23/258 (8%)
Query: 374 QNNGTLEQL-DGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGD----AKALE 427
+N TL L GLVK+ + A E+ +G + ++VD T+ L+ A + + L
Sbjct: 342 RNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TYVVLLSAIAEFSTAEQGLR 399
Query: 428 EAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
+ + VH HV R R ++ NG++ MY++C ++D A VF M RD SW+T+IT
Sbjct: 400 KGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITAL 459
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVP 545
+NG E A+ + +Q + P + I S+C+ LG + G LH +++ +G+
Sbjct: 460 DQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV--KWGLYL 517
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
++V M G G + E E M DV W +M + + A I
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMGV--------MASSQAPIT 568
Query: 606 EQLDPSRLNEKSKAGLVP 623
E + + K+GLVP
Sbjct: 569 ESVQV--FSNMMKSGLVP 584
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 27/252 (10%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+ + E+++V + K + + TF + A LE K +H + + +
Sbjct: 564 QAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAV 623
Query: 448 YNGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ Y++ +D +FS M+ RD SW++MI+G+ NG ++A+D +
Sbjct: 624 DNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSE 683
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV----SIVDMLGSTG 561
D F V +AC+++ + GM +H +G+ ++ V ++VDM G
Sbjct: 684 QMMDHCTFSIVLNACASVAALERGMEMH------AFGLRSHLESDVVVESALVDMYSKCG 737
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD-----------P 610
+D A + M + + W +++ HG LG + EI E++
Sbjct: 738 RIDYASKVFHSMSQKNEFS-WNSMISGYARHG---LGRKALEIFEEMQESGESPDHVTFV 793
Query: 611 SRLNEKSKAGLV 622
S L+ S AGLV
Sbjct: 794 SVLSACSHAGLV 805
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 412 TFSQLMQACGDAKA--LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS--V 467
TF +++AC D+ L A VH V + + N ++ MY C + V
Sbjct: 170 TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRV 229
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-------LKPDDQIFIGVFSA 520
F RDL +W+ +++ +AK G DA+ F+ F+ L+P + F + +A
Sbjct: 230 FDTTPVRDLITWNALMSVYAKRG---DAICTFTLFRAMQYDDSGIELRPTEHTFGSLITA 286
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ--AG 506
N ++ Y++ +D A VF M R+ SW +I+G +GL EDA +F + G
Sbjct: 104 NHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPG 163
Query: 507 LKPDDQIFIGVFSAC 521
+P F V AC
Sbjct: 164 CRPTSFTFGSVLRAC 178
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 216/378 (57%), Gaps = 23/378 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F+ + AC ALE + +H + L +S N ++ MY++C ++ A SVF M
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
DL SW++MI ++G G A+++F Q + G+ PD F+ V +ACS G V +G
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM + YGI P HY +VD+ G A I+ MP +P VWE L+ CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 592 HGNLELGDRCAEIVEQLDP----------------SRLNEKSKAGLVPVNASELAKEKEN 635
HGN++LG AE + +L P R NE +K +L +++
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKV-------RKLMRDQAV 659
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+K + + +EV +KVH + D HPE +Y + L +MK+ GYIP+T+FVLHD++
Sbjct: 660 RKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEY 719
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE AL HSE+LAV G++ P A +R+ KN+R+CGDCH+A K +SK+ RE+I+RD
Sbjct: 720 EQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRD 779
Query: 756 AKRFHHFKDGLCSCRDYW 773
KRFHHFK+G CSCRDYW
Sbjct: 780 RKRFHHFKNGDCSCRDYW 797
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 51/288 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G V G +EA+ + + I D T++ ++ AC + + + K VH ++ +
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE 319
Query: 439 --------------LLS------------------PLR-VSTYNGILKMYSECDSMDDAF 465
L++ P+R + T+N IL Y M++A
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
S F M ++L + MI+G A+NG G++ + +F Q + G +P D F G +ACS LG
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + + Y S+ + +++ M G ++ A MP D+ W
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGN--AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNS 496
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSR------LNEKSKAGLV 622
++ HG+ +EL D+ + E + P R L S AGLV
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLK--EGVFPDRITFLTVLTACSHAGLV 542
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+ ++ Y D ++ A VF M E +W+ MI+G+ G ++A+ + + + G
Sbjct: 225 TWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLG 284
Query: 507 LKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ DD + + SAC+ +G V + ++ ++ S+ + +++ +
Sbjct: 285 IQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSN--ALITLYCKNN 342
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+DEA + MP+ ++ W +++
Sbjct: 343 KVDEARKIFYAMPVR-NIITWNAILS 367
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
RD ++ MITG+A NG G A+++F ++ +PDD F V SA
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 239/405 (59%), Gaps = 15/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+++ L+++ + + T++ ++ A AL+ + VH HV R
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
P V N ++ MYS+C S+ + +F +M ER + SW+ M+ G++K+GLG +AV++F
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 303
Query: 502 FKQAG-LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K+ +KPD F+ V S CS G G+ + +E +++ G P ++HY +VD+ G
Sbjct: 304 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 363
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G ++EA EFI+KMP EP +W L+ CR+H N+ +G+ A + +++ N +
Sbjct: 364 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE--NAGNYV 421
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS EL KEK K ++ +E+ +H + A D SHP ++++A
Sbjct: 422 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFA 481
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+R L ++KEAGY+PE VL+D+D E KE+ L HSE+LA++ GL+ +P P+RI+K
Sbjct: 482 KVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIK 541
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH+ K +S++ GRE+ +RD RFHH G CSC DYW
Sbjct: 542 NLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
Q + V+ + ++ C A+ E + VH H+ + V ++ +Y++C + D
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A V M ER++ SW MI+G+++ G +A+ +F + +G P++ F V ++C++
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 524 -----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
LG + ++ ++ + + V S S++DM G + EA + +P E D
Sbjct: 124 SSGFQLGRQIHSLV-IKTSFESHIFVGS-----SLLDMYAKAGKICEARRVFDGLP-ERD 176
Query: 579 V 579
V
Sbjct: 177 V 177
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 394 AIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
A E L L + +S P TF+ ++ +C + + + +H V + + +
Sbjct: 92 ASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSS 151
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L MY++ + +A VF + ERD+ S +I+G+A+ GL E+A+D+F + ++ G++ +
Sbjct: 152 LLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSN 211
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ V +A S L + G +H + +++ S++DM G L +
Sbjct: 212 YVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRI 269
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ MP E V W ++ HG LG E+ + +
Sbjct: 270 FDSMP-ERTVISWNAMLVGYSKHG---LGREAVELFKLM 304
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 233/396 (58%), Gaps = 12/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
G E++E+ + K I+ + T S ++ AC + + K +H+ V ++ V
Sbjct: 187 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 246
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
I+ MY +C ++ A F M E+++ SW M+ G+ +G ++A+++F + AG+
Sbjct: 247 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 306
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F+ V +ACS G + EG F++MS ++ + P ++HY +VD+LG GYL EA
Sbjct: 307 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 366
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
+ I+ M + PD VW L+ CRMH N++LG+ A + +LDP + +A
Sbjct: 367 DLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG 426
Query: 628 ELAKEKENKKLASQN----------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
++ E ++ +N L++++ +VH + GD HP+ +KIY + L ++
Sbjct: 427 RW-EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL 485
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+E GY+P+ VLHD+ E KE L HSE+LAV+ G++++ I I+KNLRVCGDCH
Sbjct: 486 QEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCH 545
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A+K ISKIV RE+++RD+KRFHHF+DGLCSC DYW
Sbjct: 546 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 17/284 (5%)
Query: 322 YQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLE- 380
+ W RR+Y NPN + + N + V+ D EA R+ + L
Sbjct: 13 FSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSL 72
Query: 381 QLDGLVKEGKVKEAIEVLGL-----LEKQCISV----DLPTFSQLMQACGDAKALEEAKA 431
+ + +K +L L +Q + DL S L+ L +A+
Sbjct: 73 KPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDART 132
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+ + + S + ++ ++ Y + D A VF M ERD+ SW+++I +A+NG+
Sbjct: 133 LFDEI----SHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGM 188
Query: 492 GEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY 550
++++IF + + G + + V AC+ G G + + K G+ ++
Sbjct: 189 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVG 247
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
SI+DM G ++ A + ++M E +V W ++ MHG+
Sbjct: 248 TSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMHGH 290
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 231/402 (57%), Gaps = 15/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G+ +EA+++ +++ I D T Q + AC + +LEE H + + S L
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG--KAITSGL 402
Query: 444 --RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ N ++ +Y +C +DD+ +F+ M RD SW M++ +A+ G + + +F +
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
Q GLKPD GV SACS G V +G +F+ M+ +YGIVPS+ HY ++D+ +G
Sbjct: 463 MVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------S 611
L+EA+ FI MP PD W L++ CR GNLE+G AE + +LDP S
Sbjct: 523 RLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 582
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
K K V +EK KK Q+ ++ + K+H + A D S P D+IYA +
Sbjct: 583 IYASKGKWDSVA-QLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++ + GY P+T FV HD+++ K + L HSERLA++ GL+ P+ PIR+ KNLR
Sbjct: 642 ELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLR 701
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A K IS + GRE+++RDA RFH FKDG CSC D+W
Sbjct: 702 VCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G KEAIE ++ Q + +D F ++ ACG A+ E K +H + R
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY +C + A +VF M ++++ SW M+ G+ + G E+AV IF
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDM 556
+++G+ PD SAC+ + + EG S I + HYV S+V +
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
G G +D++ +M + V W +++ G R E ++ D
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFG------RAVETIQLFD 461
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
YN ++ C ++DA +F M E+D SW MI G A+NGL ++A++ F + K GL
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 508 KPDDQIFIGVFSACSALGDVVEG 530
K D F V AC LG + EG
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEG 289
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 238/411 (57%), Gaps = 27/411 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF--SQLMQACGDAKALEEAKAVHEHVER 438
+ G VK + +A+EV E + + V+ F + + AC A AL + ++ VE+
Sbjct: 201 MISGYVKADRFLDALEVFD--EMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQ 258
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ MY +C +D+A+ VF ++ R LT+W+ MI GFA +G +DA+++
Sbjct: 259 SGIEVDAKLATAVVDMYCKCGCVDEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALEL 318
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q + AG+ PDD + V +AC+ G+V EG + + +GI P +HY +VD+ G
Sbjct: 319 FHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFG 378
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
G LDEA + I++MPM+PD+ V L+ C++HG+++LG+ V LDP
Sbjct: 379 RAGQLDEAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVL 438
Query: 611 --------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPE 662
R +E K L E+ K A ++++EV + E+R G+ HP+
Sbjct: 439 LANLLAGAGRWDEVGKV-------RRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQ 491
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
+IYA+ + ++++ GY+P+T LHD+ +E KE ALL HSE+LA++ GLL + R
Sbjct: 492 AREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRE 551
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+RI KNLRVC DCH A K +S++ GRE+++RD RFHHFKDG+CSC+DYW
Sbjct: 552 TLRITKNLRVCRDCHEATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L V ++ ++ +DDA VF M R+L SW++MI+G+ K DA+++F +
Sbjct: 162 LDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEM 221
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G++ + + AC+ G + G + + + GI K ++VDM G
Sbjct: 222 RALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGC 280
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
+DEA + +P + W ++ +HG RC + +E ++ AG+
Sbjct: 281 VDEAWGVFDSLPAR-GLTTWNCMIGGFAVHG------RCDDALEL-----FHQMEAAGVA 328
Query: 623 PVNASEL 629
P + + L
Sbjct: 329 PDDVTLL 335
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 249/431 (57%), Gaps = 20/431 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A +V N + +D + S L GL K G +EA+ + ++ I +D T
Sbjct: 267 AQEVFNRIREKDVLSWTS----------MLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++ AC AL++ K +H +++ + ++ MY++C S+D A VF M
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ +W+ +I G A +G GEDA+ +F Q + L PDD FI + ACS G V EG+
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
F++M + I P M+HY +VD+L +D+AL FIE MP++ + +W L+ CR
Sbjct: 437 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSG 496
Query: 593 GNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVN-ASELAKEKENK---KLASQNL 643
G+ +L ++ V +L+P + AG+ + A +L K+ +NK K +
Sbjct: 497 GHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSW 556
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEAL 702
+E+ +H++ AGD SH +T++IYA+I + ++ + G++P T VL DI++E KE +L
Sbjct: 557 IELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSL 616
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+P+ +PIRI+KNLRVC DCHS LK+ SK+ RE++ RD RFHHF
Sbjct: 617 FLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHF 676
Query: 763 KDGLCSCRDYW 773
K+G CSC D+W
Sbjct: 677 KEGSCSCMDFW 687
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T L+ AC LE K +H + + L + N IL MY +CD ++ A VF
Sbjct: 212 DEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVF 271
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ + E+D+ SW +M++G AK+G ++A+ +F + + ++ D+ +GV SAC+ G +
Sbjct: 272 NRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALD 331
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G + + + I + ++VDM G +D AL+ +M + +V W L+
Sbjct: 332 QGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGG 389
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL 613
MHG+ G+ + +Q++ +L
Sbjct: 390 LAMHGH---GEDAISLFDQMEHDKL 411
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + ++ + VD T+ ++ AC A++ + H V + + N ++
Sbjct: 94 EAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALI 153
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKPDD 511
+ Y C S A VF T RD+ +W+ MI GL E A D+ + K L+PD+
Sbjct: 154 QFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDE 213
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + AC+ LG++ G LH S SK+ G+ +++ +I+DM ++ A E
Sbjct: 214 VTMVSLVPACAQLGNLERGKFLH--SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVF 271
Query: 571 EKMPMEPDVDVWEKLMN 587
++ E DV W +++
Sbjct: 272 NRIR-EKDVLSWTSMLS 287
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
ISVD L C ++A A+ L +PL S L + S ++ A
Sbjct: 12 ISVDF-----LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLAL-SHSGDLNYAR 65
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F+ M D +TMI G+A++ +AV ++ + G+ D+ + V +AC+ LG
Sbjct: 66 KLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG 125
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
V G H E + +G + +++ + G A + ++ + DV W
Sbjct: 126 AVKLGRRFHCEVLKNGFG--SDLFVINALIQFYHNCGSFGCACDVFDESTVR-DVVTWNI 182
Query: 585 LMNLCRMHGNLELGDRCAEIVEQ---LDPSRLNEKSKAGLVPVNA 626
++N H N L ++ +++++ LD R +E + LVP A
Sbjct: 183 MIN---AHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 240/404 (59%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEK-QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G EAIEV L+E+ + I + T+ ++ A AL++ +H V +
Sbjct: 167 ITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNC 226
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S + V T ++ MY +C +DDA S+F + ++ W+ MI+ + +G GE A+++
Sbjct: 227 LYSDVFVGT--CLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALEL 284
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + K +KPD F+ + SACS G V + F M ++YGI PS+KHY +VD+ G
Sbjct: 285 FREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFG 344
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L+ A FI+KMP++PD W L+N CR+HGN+ELG +E + ++D +
Sbjct: 345 RAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVL 404
Query: 619 AGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ N + LA+++ +K + + + +KV + G+ +HP+ ++IY
Sbjct: 405 LSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRE 464
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+R L +++K GY+P+ FVL D++++ KE L+ HSERLA+++G++S+ + PIRI KN
Sbjct: 465 LRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKN 524
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+ K IS I RE+I+RD+ RFHHFK G CSC DYW
Sbjct: 525 LRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 122/251 (48%), Gaps = 11/251 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
DD R S N + G + G EA+++ + + + +D T + ++ C
Sbjct: 53 DDMPARDRGSWN----AMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQV 108
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ K +H +V + + N ++ MY++ S+ A VF + +D+ SW+T+I
Sbjct: 109 GDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLI 167
Query: 484 TGFAKNGLGEDAVDIFSQFKQ-AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
TG+A+NGL +A++++ ++ + P+ ++ + A S +G + +GM + K+
Sbjct: 168 TGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN-C 226
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA 602
+ + ++DM G G LD+A+ ++P + V W +++ +HG+ G++
Sbjct: 227 LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVP-WNAMISCYGVHGD---GEKAL 282
Query: 603 EIVEQLDPSRL 613
E+ ++ R+
Sbjct: 283 ELFREMKAERV 293
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++ACGD L + K +H V +L V ++ MYS + DA +F +M RD
Sbjct: 3 VVKACGD---LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
SW+ MI+G+ +NG +A+DI + + G+K D V C+ +GD++ G L
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKL 116
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 239/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
LD G+ E + + + I + T++ +++AC + + + K VH + +
Sbjct: 234 MLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSR 293
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+ M A VF M + DL SW MI+G+A+NG ++A+ F
Sbjct: 294 TGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFD 353
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+G +PD F+GV SAC+ G V +G+ F S+ YGI + HY ++D+L +
Sbjct: 354 MLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRS 413
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + A + I MP++P+ +W L+ CR+H N+ L AE + +++P N +
Sbjct: 414 GLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPE--NPATYVT 471
Query: 621 LVPVNASE-LAKEKEN----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + AS L E EN K+ + + +EV ++VH + GD SHP+ ++IYAL
Sbjct: 472 LANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYAL 531
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ L +M+E GY+ +T FVLHD++ E K++ + HSERLAV+ G++++P +PI++ KN
Sbjct: 532 LKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKN 591
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+CGDCH+ +K+ISKIV RE+I+RD+ RFHHFK+G CSCRDYW
Sbjct: 592 LRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+ +H HV R ++ + MY++ +DDA SVF M RD+ SW M+ +
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDA 241
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIV 544
G + +F + ++G+ P++ + GV AC+ LG V G + +S + D
Sbjct: 242 GRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMA-KSRTGDSCFA 300
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S ++V M G + A+ MP +PD+ W +++
Sbjct: 301 GS-----ALVHMYSKYGDMGTAMRVFRGMP-KPDLVSWTAMIS 337
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 235/403 (58%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G + A+ V +++ T+S + ALE+ K VH H+ +
Sbjct: 225 ISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQ 284
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N +L MY++ SM DA VF + +DL +W++M+T FA+ GLG++AV F +
Sbjct: 285 KLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++G+ + F+ + +ACS G V EG H+ M K+Y + P ++HYV++VD+LG G
Sbjct: 345 MRKSGIYLNQITFLCILTACSHGGLVKEGK-HYFDMIKEYNLEPEIEHYVTVVDLLGRAG 403
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+ AL FI KMPMEP VW L+ CRMH N ++G A+ V QLDP + L
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPD--DSGPPVLL 461
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS ++ K KK + + +E+ + VH + A D +HP ++IY +
Sbjct: 462 YNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMW 521
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++++ GY+P+ +VL +D++ +E L HSE++A++ L+ PA A IRIMKN+
Sbjct: 522 DEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNI 581
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCHSA K ISK+ RE+++RD RFHHF +G CSC DYW
Sbjct: 582 RICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ + AC +K L++A+ +H H+ N ++ +Y +C S+ +A VF M
Sbjct: 53 VYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEG 530
++D+ SW ++I G+A+N + +A+ + + KP+ F + A A D + G
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGG 172
Query: 531 MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H ++ D+ YV +++DM G +D A +K+ + V W L++
Sbjct: 173 QIHALAVKCDW----HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS-WNALIS 226
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ L++A G +H + V + +L MY+ C MD A +VF +
Sbjct: 154 TFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL 213
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ SW+ +I+GFA+ G GE A+ +F++ ++ G + + +FS + +G + +G
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGK 273
Query: 532 LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
M K + +V +++DM +G + +A + E++ + D+ W ++
Sbjct: 274 WVHAHMVKSR---QKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAF 329
Query: 590 RMHGNLELGDRCAEIVEQLDPS 611
+G LG E++ S
Sbjct: 330 AQYG---LGKEAVSHFEEMRKS 348
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 238/411 (57%), Gaps = 27/411 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF--SQLMQACGDAKALEEAKAVHEHVER 438
+ G VK + +A+EV E + + V+ F + + AC A AL + ++ VE+
Sbjct: 201 MISGYVKADRFLDALEVFD--EMRALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQ 258
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ MY +C +D+A+ VF ++ R LT+W+ MI GFA +G +DA+++
Sbjct: 259 SGIEVDAKLATAVVDMYCKCGCVDEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALEL 318
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q + AG+ PDD + V +AC+ G+V EG + + +GI P +HY +VD+ G
Sbjct: 319 FHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFG 378
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------- 611
G LDEA + I++MPM+PD+ V L+ C++HG+++LG+ V LDP
Sbjct: 379 RAGQLDEAKKVIDEMPMDPDLAVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVL 438
Query: 612 ---------RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPE 662
R +E K L E+ K A ++++EV + E+R G+ HP+
Sbjct: 439 LANLLAGAGRWDEVGKV-------RRLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQ 491
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
+IYA+ + ++++ GY+P+T LHD+ +E KE ALL HSE+LA++ GLL + R
Sbjct: 492 AREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRE 551
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+RI KNLRVC DCH A K +S++ GRE+++RD RFHHFKDG+CSC+DYW
Sbjct: 552 TLRITKNLRVCRDCHEATKYVSRVFGREIVVRDRSRFHHFKDGMCSCKDYW 602
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L V ++ ++ +DDA VF M R+L SW++MI+G+ K DA+++F +
Sbjct: 162 LDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEM 221
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G++ + + AC+ G + G + + + GI K ++VDM G
Sbjct: 222 RALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQS-GIEVDAKLATAVVDMYCKCGC 280
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
+DEA + +P + W ++ +HG RC + +E ++ AG+
Sbjct: 281 VDEAWRVFDSLPAR-GLTTWNCMIGGFAVHG------RCDDALEL-----FHQMEAAGVA 328
Query: 623 PVNASEL 629
P + + L
Sbjct: 329 PDDVTLL 335
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 230/378 (60%), Gaps = 24/378 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S ++ AC +LE+ K VH + + L N +L MY++ S++DA VF +
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW++M+TG++++GLG+ A+ F + + + P+D F+ V +ACS G + EG
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
H+ M K Y + P + HYV++VD+LG G+LD A++FI +MP++P VW L+ CRM
Sbjct: 341 -HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRM 399
Query: 592 HGNLELGDRCAEIVEQLD----------------PSRLNEKSKAGLVPVNASELAKEKEN 635
H N+ELG AE + +LD R N+ +K ++ KE
Sbjct: 400 HKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV-------RKMMKESGV 452
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
KK + + +E+ ++VH + A D +HP+ +I+ + + ++KE GY+P++ VL +DQ
Sbjct: 453 KKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQ 512
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
+ +E L HSE+LA++ LL++P + IRI KN+R+CGDCHSA K +SK+V RE+I+RD
Sbjct: 513 QEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRD 572
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHF DG CSC DYW
Sbjct: 573 TNRFHHFCDGACSCEDYW 590
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 8/175 (4%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L++ C L E K +H + L S R + N +L +Y++C + A +F M+
Sbjct: 21 LLKRCTHLNKLNEGKIIHALL--LNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS 78
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG--DVVEGM 531
RD+ +W +ITG++++ +DA+ + + + GLKP+ + A S +G DV++G
Sbjct: 79 RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ YG ++ +I+DM +L+EA + M + +V W L+
Sbjct: 139 -QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS-WNALI 191
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
IL MY+ C +++A +F M ++ SW+ +I G+A+ G G+ A +FS + +KP
Sbjct: 158 AILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKP 217
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEAL 567
+ V AC+++G + +G M K +G + +V +++DM +G +++A
Sbjct: 218 THFTYSSVLCACASMGSLEQGKWVHALMIK-WG--EKLVAFVGNTLLDMYAKSGSIEDAK 274
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+ +++ + DV W ++ HG LG + E++ +R+ L + A
Sbjct: 275 KVFDRLA-KRDVVSWNSMLTGYSQHG---LGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 249/404 (61%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + GK +EA+ + ++ + I D T L+ AC AL K H ++ ++
Sbjct: 194 INGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGL 253
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + N +L +Y+ C +++A ++F M +++ SW ++I G A NGLG++A+++F
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKN 313
Query: 502 FK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GL P + F+G+ ACS G V EG +F MS++Y I P ++H+ +VD+L
Sbjct: 314 MESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARA 373
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + +A E+I KMPM+P+V +W L+ C +HG+ +L + + QL+P+ +
Sbjct: 374 GQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPN--HSGDYVL 431
Query: 621 LVPVNASE-----LAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + ASE + K ++ +K+ +L+EV ++VHE+ GD SHP+ D IYA
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAK 491
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ + +++ GY+P+ V D+++E KE AL+ HSE++A++ L+S+P R PIR++KN
Sbjct: 492 LKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKN 551
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
L+VC DCH A+K++SK+ RE+++RD RFHHFK+G CSC+DYW
Sbjct: 552 LKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T+ L++A G + + +H V R + N +L +Y+ C + A+ VF
Sbjct: 120 DTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M E+DL +W+++I GFA+NG E+A+ ++++ G+KPD + + SAC+ +G +
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALT 239
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G F G+ ++ ++D+ G ++EA ++M + V W L+
Sbjct: 240 LGK-RFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLIVG 297
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
++G LG E+ + N +SK GL+P
Sbjct: 298 LAVNG---LGKEAIELFK-------NMESKEGLLP 322
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 461 MDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVF 518
M A VFS + + ++ W+T+I G+A+ G AV ++ + + +G ++PD + +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128
Query: 519 SACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
A + DV G +H + +G + +++ S++ + + G + A + +KMP E
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSGFGSLIYVQN--SLLHLYANCGDVASAYKVFDKMP-EK 185
Query: 578 DVDVWEKLMN 587
D+ W ++N
Sbjct: 186 DLVAWNSVIN 195
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 239/403 (59%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V++G +++ + + D TF+ +++A +L K +H + R +
Sbjct: 424 ISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN 483
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + +G++ MY++C S+ DA VF M +R+ SW+ +I+ A NG GE A+ F++
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++GL+PD +GV +ACS G V +G +F++MS YGI P KHY ++D+LG G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
EA + +++MP EPD +W ++N CR+H N L +R AE + ++ R + + +
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR-DAAAYVSM 662
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+ + +E+ KK+ + + +EV K+H + + D +HP D+I I
Sbjct: 663 SNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKI 722
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L A+++ GY P+T V+ D+D++ K E+L HSERLAV+ L+S+P PI +MKNL
Sbjct: 723 NELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNL 782
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R C DCH+A+K+ISKIV RE+ +RD RFHHF +G+CSC DYW
Sbjct: 783 RACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL---LSPLRVSTYNGILKMYSECDSM 461
C D TF+ L+ C DA VH +L +P ++ N +LK Y E +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF-LTVSNVLLKSYCEVRRL 200
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
D A +F + E+D +++T+ITG+ K+GL +++ +F + +Q+G +P D F GV A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 522 SALGDVVEG-MLHFESMSKDY 541
L D G LH S++ +
Sbjct: 261 VGLHDFALGQQLHALSVTTGF 281
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 402 EKQCISVD---LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
E QC+ D P F+ ++ + +L+ + +H + + N ++ MY++C
Sbjct: 341 EMQCMGFDRRNFP-FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ ++A +F ++ +R SW +I+G+ + GL + +F++ + + L+ D F V
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
A ++ ++ G + G + ++ +VDM G + +A++ E+MP
Sbjct: 460 KASASFASLLLGK-QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 579 VDVWEKLMN 587
V W L++
Sbjct: 519 VS-WNALIS 526
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 228/394 (57%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G E++ + + ++ + D ++ AC A+ +A+ + ++++R L V
Sbjct: 468 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 527
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ M+++C ++ A +F M E+++ SW MI + +G G A+D+F ++G+
Sbjct: 528 TAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 587
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ + + ACS G V EG+ F M +DY + +KHY +VD+LG G LDEAL+
Sbjct: 588 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 647
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
IE M +E D +W + CR H ++ L ++ A + +L P + NA
Sbjct: 648 LIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGR 707
Query: 628 --------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+L ++ KK+ +EV +K H++ GDT+HP + +IY +++ L +++
Sbjct: 708 WEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLEL 767
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
GY+P+T FVLHD+D+E K L +HSE+LA++ GL+++P PIRI+KNLRVCGDCH+
Sbjct: 768 VGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTF 827
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K++S I GR +I+RDA RFHHFK+G CSC DYW
Sbjct: 828 CKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 47/275 (17%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC D K L+ A ++ MY +C ++DA +F M
Sbjct: 181 TLPFVIRACRDLKNLQMA---------------------LVDMYVKCREIEDARFLFDKM 219
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ERDL +W MI G+A+ G +++ +F + ++ G+ PD + V AC+ LG
Sbjct: 220 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA----- 274
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + DY + V +++DM G ++ A E ++M E +V W ++
Sbjct: 275 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIA 333
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLV--PVNASELAKEKENKKLAS--- 640
HG G + ++ + S + ++ + A L+ +N L + ++ AS
Sbjct: 334 AYGYHGQ---GRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHG 390
Query: 641 --QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
QNL+ VH Y + + D Y L G+
Sbjct: 391 MLQNLIVANKLVHFY----SYYRALDDAYGLFDGM 421
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH--VERLLSPLRVS 446
G+ ++A+++ ++ + D T + L+ AC + + L + + VH V +L L V+
Sbjct: 339 GQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVA 398
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ YS ++DDA+ +F M RD SW M+ GFAK G + F + + G
Sbjct: 399 --NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCG 456
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+PD+ G+ E ++ F+ M ++ G+VP V++V G + +A
Sbjct: 457 ARPDNYTL-------PFCGNANESLVLFDKMREE-GVVPDKVAMVTVVFACAKLGAMHKA 508
Query: 567 L---EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
++I++ + DV + +++ MH + EI ++++
Sbjct: 509 RTIDDYIQRKKFQLDVILGTAMID---MHAKCGCVESAREIFDRME 551
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + GK E++ + + ++ + D ++ AC A+ +A+ + ++++R
Sbjct: 230 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY++C ++ A +F M E+++ SW MI + +G G A+D+F
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 501 QFKQAGLKPDDQIFIGVFSAC 521
+G+ PD + AC
Sbjct: 350 MMLSSGMLPDKITLASLLYAC 370
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 417 MQACGDAKALEEAKAVHEH--VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+ A + + L + + VH V +L + V+ N ++ YS ++DDA+ +F M R
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVA--NKLIYFYSYYRALDDAYGLFDGMCVR 142
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQ---AGLKPDDQIFIGVFSACSALGDV 527
D SW M+ GFAK G D ++ F F++ G +PD+ V AC L ++
Sbjct: 143 DSVSWSVMVGGFAKVG---DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL 195
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 230/376 (61%), Gaps = 19/376 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T ++ AC A AL E + VH+H+ + S L V+T + MY C S++ A +F
Sbjct: 533 TCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVAT--ALASMYGRCGSLESAREIFE 590
Query: 470 NM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ ERD+ ++ MI +++NGL +A+ +F + +Q G +PD+Q F+ V SACS G
Sbjct: 591 KVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLAD 650
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG F SM + YGI PS HY VD+LG G+L +A E I M ++P V VW+ L+
Sbjct: 651 EGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGA 710
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV--------NASELAKEKENKKL-- 638
CR + +++ G +V +LDP +E + L + A+E+ E E++ L
Sbjct: 711 CRKYRDVDRGRLANSMVRELDPG--DESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRK 768
Query: 639 -ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
A ++ +E++S+VHE+ AGD SHP +++IY + L A+++E GY+P+TR VL +D+
Sbjct: 769 EAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAE 828
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE L HSERLA++ G++SS +R+MKNLRVC DCH+A K ISKIV +E+++RD
Sbjct: 829 KERLLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTH 887
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHF DG CSC DYW
Sbjct: 888 RFHHFVDGSCSCGDYW 903
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 23/188 (12%)
Query: 409 DLPTFS----------QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
DLP+ S +L++A GD + L + + +H + L L N +L++Y +C
Sbjct: 18 DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSL--GLEEELGNHLLRLYLKC 75
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+S+ D VFS + RD SW T+IT + ++G + A+ +F + +Q G++ D F+ V
Sbjct: 76 ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVL 135
Query: 519 SACSALGDVVEGM-LH---FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
AC+ LGD+ +G +H ES K ++ ++ ++ + GS G + A+ EK
Sbjct: 136 KACARLGDLSQGRSIHAWIVESGLKGKSVLANL-----LLHIYGSCGCVASAMLLFEK-- 188
Query: 575 MEPDVDVW 582
ME D+ W
Sbjct: 189 MERDLVSW 196
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 109/212 (51%), Gaps = 8/212 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG----DAKALEEAKAVHEHVE 437
+ G ++G++K A+E+ ++ + ++ T+ L++A +A+A+ E + +H +
Sbjct: 395 IAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN--MTER-DLTSWDTMITGFAKNGLGED 494
+ ++KMY+ C ++D+A + F M +R D+ SW+ +I+ +++G G+
Sbjct: 455 SCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKR 514
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
A+ F + G+ P+ + V AC+ + EG + + + + G+ ++ ++
Sbjct: 515 ALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL-RHSGMESNLFVATALA 573
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G G L+ A E EK+ +E DV ++ ++
Sbjct: 574 SMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ K AI + ++++ + D TF +++AC L + +++H + +
Sbjct: 107 GQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLA 166
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y C + A +F M ERDL SW+ I A++G A+++F + + G++
Sbjct: 167 NLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVR 225
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P + + C+ + +HF + ++ G+ ++ ++ G+L +A E
Sbjct: 226 PARITLVIALTVCATIRQA--QAIHF--IVRESGLEQTLVVSTALASAYARLGHLYQAKE 281
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNL 595
++ E DV W ++ HG++
Sbjct: 282 VFDR-AAERDVVSWNAMLGAYAQHGHM 307
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 47/279 (16%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
P L+ A + +A+A+H V L L VST + Y+ + A VF
Sbjct: 226 PARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVST--ALASAYARLGHLYQAKEVF 283
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL--GD 526
ERD+ SW+ M+ +A++G +A +F++ G+ P + + CS+L G
Sbjct: 284 DRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGR 343
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ G + + +D + ++ +DM G +EA +++P + W ++
Sbjct: 344 MIHGCALEKGLDRDIVLGNAL------LDMYTRCGSPEEARHLFKRIPC--NAVSWNTMI 395
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEV 646
G ++ R E+ +++ G+ PV A+ L NLLE
Sbjct: 396 AGSSQKGQMK---RAVELFQRMQLE--------GMAPVRATYL------------NLLEA 432
Query: 647 RSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
+ S+PE + A R L +++ GY E
Sbjct: 433 VA----------SNPEEARAMAEGRKLHSRIVSCGYASE 461
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 241/397 (60%), Gaps = 13/397 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G EA+E+ ++K+ I ++ AC + AL++ + +H + +R L
Sbjct: 231 RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 290
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ MY++C +D A+ VF M+ ++++SW+ MI G A +G EDA+D+FS+
Sbjct: 291 LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD--- 347
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ P++ F+GV +AC+ G V +G+ F SM K+YG+ P ++HY IVD+LG G L EA
Sbjct: 348 INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 407
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKA 619
+ + +P EP VW L+ CR HGN+ELG+R +I+ +L+P N +KA
Sbjct: 408 EKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKA 467
Query: 620 GLVPV--NASELAKEKENKKLASQNLLEV-RSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
G +L KE+ K +++++ R +VH++ GD SHP+ IY ++ ++ +
Sbjct: 468 GRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKER 527
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
++ GY P+ VL DID+E KE A+ HSE+LA+ GL+++ IRI+KNLRVC DC
Sbjct: 528 LQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDC 587
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HSA K+IS++ RE+I+RD R+HHF++G CSC+D+W
Sbjct: 588 HSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++AC DA + E VH H+ + + ++MY+ + +A + +
Sbjct: 160 TYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDK 219
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
E D + G +A++IF Q ++ ++P + V SAC+ LG + +G
Sbjct: 220 GGEVDAVCMPD------RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 273
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ +K I S+VDM G +D A E EKM +V W ++
Sbjct: 274 RW-IHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWNAMIGGLA 331
Query: 591 MHGNLE 596
MHG E
Sbjct: 332 MHGRAE 337
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 220/376 (58%), Gaps = 11/376 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF +++AC L E KA+H + V N ++ MY+ C S+++A +F
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+ + SW M+ F++ G +A+D+F + G+KPDD + + C+ G +
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLE 562
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G +F M++ +G+ P+ H+ ++VD+LG +G L +A E +E MP EPD W +
Sbjct: 563 QGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTA 622
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASELAKEKEN--KKLA 639
CR+HG LELG+ AE V +LDPS N + G+ AS K +E KKL
Sbjct: 623 CRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLP 682
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +EV K+HE+ +G HP TD+I + L M+ AGY+P+T+ VLHD+ + KE
Sbjct: 683 GLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKE 742
Query: 700 EALLAHSERLAVSHGLLSSPARA-PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
LL HSE++A++ GL+SS PIR++KNLRVC DCH+A K I++I GR++I+RD R
Sbjct: 743 TMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNR 802
Query: 759 FHHF-KDGLCSCRDYW 773
FH F DG CSC DYW
Sbjct: 803 FHRFSSDGKCSCGDYW 818
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLR 444
V+ G EA+E+ L+ + TF ++ AC KAL + + VH H+ ER L
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS-E 342
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ ++ MY++C S+++A VF+ M RD +W T+I +A NG G+DA F +
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G + D + + + G V M F M+ G+ P ++++++ S G L
Sbjct: 403 LGSR-DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 565 EALEF---IEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
E I + +E +V V L+N+ G+LE +R
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAER 500
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ +C + E +A+HE + N ++ MY +CDS+ DA SVF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 469 SNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+M +R++ SW+ MI +A+NG +A+ ++ + GL D F+ V ACS+L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T+ ++ + L E + +H + S L V+T ++ MY +C S +A VF
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVAT--ALINMYGKCGSSHEAREVFD 266
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +RD+ SW+ MI + +NG +A++++ + G K F+ + ACS++ + +
Sbjct: 267 KMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L S + G+ + ++V+M G L+EA + M D W L+
Sbjct: 327 GRL-VHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLI 381
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV--S 446
G EA+ + + Q + D TF ++ AC +L + + +H V S L S
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRV--FYSGLDSFQS 143
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY+ S+ DA +F ++ RD TSW+ +I +++G A+ IF + K
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CD 202
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+KP+ +I V S S + EG +H E ++ G + ++++M G G E
Sbjct: 203 MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN--GFDSDLVVATALINMYGKCGSSHE 260
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV- 624
A E +KM + D+ W ++ +G+ E+ ++LD +++KA V +
Sbjct: 261 AREVFDKMK-KRDMVSWNVMIGCYVQNGDFH---EALELYQKLDMEGF-KRTKATFVSIL 315
Query: 625 NASELAKEKENKKLASQNLLE 645
A K +L ++LE
Sbjct: 316 GACSSVKALAQGRLVHSHILE 336
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 236/396 (59%), Gaps = 13/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EA++ + + + +D +FS + G+ L+E + +H + +L L
Sbjct: 732 GPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVL 791
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N + MY +C +DD F + R SW+ +I+ A++G A + F + GLK
Sbjct: 792 NATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLK 851
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+ + SACS G V EG+++F SM+ ++G+ +++H V I+D+LG +G L EA
Sbjct: 852 PDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEG 911
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE 628
FI+KMP+ P+ VW L+ C++HGNLELG + A+ + +L+ S ++ + V AS
Sbjct: 912 FIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSS--DDSAYVLYSNVCAST 969
Query: 629 LA---KEKENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
E K++ SQ+L +++++KV + GD HP++ +IYA + LR
Sbjct: 970 QRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMT 1029
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+E G++P+T + L D D+E KE L HSER+A++ GL++S +P+RI KNLRVCGDCH
Sbjct: 1030 REEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCH 1089
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S K++SKIVGR++++RD+ RFHHF G CSC DYW
Sbjct: 1090 SVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 342 SYSGNIQNGMMASQVLNNCKHEDDFAEAS--RSSQNNGTLEQLDGLVKEGKVKEAIEVLG 399
S GN + AS+V NN + D + S +S +NG E E++
Sbjct: 394 SMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFE------------ESLGHFF 441
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+ + D T S L+ ACG A+ L+ + +H + + V N +L MY++
Sbjct: 442 WMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAG 501
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S +DA VF M RDL SW++M+ ++G A+ + + + + F S
Sbjct: 502 SSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALS 561
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
AC L E + + + + ++ ++V M G G +DEA + + MP E DV
Sbjct: 562 ACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDV 616
Query: 580 DVWEKLM 586
W L+
Sbjct: 617 VTWNALI 623
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MYS+ S+ A VF M +R+ SW+ MI+GF + G A+ F + G+
Sbjct: 186 NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVT 245
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P + + +AC G + EG G++ ++ S++ G+ G + EA +
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305
Query: 569 FIEKMPMEPDVDVWEKLM 586
E++ EP++ W LM
Sbjct: 306 LFEEIE-EPNIVSWTSLM 322
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 10/236 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D + + +S NN + G V+ G +A++ + + ++ + ++ AC +
Sbjct: 206 DKMYDRNDASWNN----MISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRS 261
Query: 424 KALEE-AKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
+ E A+ +H +V + L+S + V T +L Y S+ +A +F + E ++ SW
Sbjct: 262 GCMTEGARQIHGYVVKCGLMSNVFVGT--SLLHFYGTHGSVSEANKLFEEIEEPNIVSWT 319
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
+++ +A NG ++ ++I+ + GL V C GD G + K
Sbjct: 320 SLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKS 379
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
S+ S++ M G+ ++EA M E D W ++ +G E
Sbjct: 380 GLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQ-ERDTISWNSIITASAHNGRFE 434
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V++GK AI +L + K +++ TF+ + AC + LE+ K VH V +
Sbjct: 529 VEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNL 585
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY + MD+A V M ERD+ +W+ +I G A + + F+ ++
Sbjct: 586 IIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRRE 645
Query: 506 GLKPDDQIFIGVFSAC 521
GL + + + C
Sbjct: 646 GLLSNYITIVNLLGTC 661
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS N ++ M+ DS+++A VF+NM ERD SW+++IT A NG E+++ F ++
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
K D + AC + + G LH + G+ ++ S++ M G
Sbjct: 446 THPKTDYITISALLPACGSAQHLKWGRGLH--GLITKSGLESNVCVCNSLLSMYAQAGSS 503
Query: 564 DEALEFIEKMPMEPDVDVWEKLM 586
++A MP D+ W +M
Sbjct: 504 EDAELVFHTMPAR-DLISWNSMM 525
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 376 NGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
N T++ + + +EG + I ++ LL C+S D L+ +H H
Sbjct: 633 NATIQAFNLMRREGLLSNYITIVNLL-GTCMSPDY--------------LLKHGMPIHAH 677
Query: 436 VERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE 493
+ +++ + TY + ++ MY++C ++ + +F + ++ ++W+ + + A G GE
Sbjct: 678 I--VVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGE 735
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV- 551
+A+ ++ + G+ D F + L + EG LH + + + YV
Sbjct: 736 EALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGF----ELDEYVL 791
Query: 552 -SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ +DM G G +D+ I +P W L++ HG
Sbjct: 792 NATMDMYGKCGEIDDVFR-ILPIPKIRSKRSWNILISALARHG 833
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 237/403 (58%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERL 439
L GL + ++A+EV L K+ + + TFS ++ AC + A +E K +H +
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + +L MYS+ +++ A VF+ ERD+ SW++MITG+ ++G + A+++F
Sbjct: 536 GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVF 595
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ GL DD FIGV +AC+ G V EG +F M KDY I ++HY +VD+
Sbjct: 596 QIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSR 655
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP--------- 610
G D+A++ I MP +W L+ CR+H NLELG AE + L P
Sbjct: 656 AGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLL 715
Query: 611 SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S ++ + + +L E++ KK A + +E+++++ + AGD SHP +D +YA +
Sbjct: 716 SNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKL 775
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++K+ GY P+T +V HD+++E KE L HSERLA+++GL++ P API+I KNL
Sbjct: 776 EELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNL 835
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCH+ +++IS I R LI+RD+ RFHHFK G+CSC YW
Sbjct: 836 RICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 7/183 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ + F ++ C + L K +H V + ++ YS+C S+D+AF
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 466 SVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+FS ++ +W MI GF +N E AVD+F Q + G++P+ + V + +
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS- 420
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ LH + + Y VPS+ +++D TG + E+ +P + D+ W
Sbjct: 421 --SLLSQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSA 475
Query: 585 LMN 587
++
Sbjct: 476 MLT 478
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G E I ++ ++ + ++ + TF+ ++ A D +E VH + +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY + + + DA +VF +M RD +W+ MI G+A G + +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
+ AG+K +F CS
Sbjct: 297 MRLAGVKLSRTVFCTALKLCS 317
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYN 449
+EA+ + L + VD T S ++ CG ++ H + L S VS
Sbjct: 86 REALHLFKDLHSSGLGVDGLTLSCALKVCG--VLFDQVVGRQVHCQSLKSGFLEDVSVGT 143
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY + + +D +F M +++ SW ++++G+A+NGL ++ + + +Q + G+ P
Sbjct: 144 SLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNP 203
Query: 510 DDQIFIGVFSACSALGD--VVEGMLHFESM 537
+ F V AL D ++EG + +M
Sbjct: 204 NGFTFATVL---GALADESIIEGGVQVHAM 230
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S +L Y + ++ ++ VF ++ +D+ +W M+TG A+ E A+++F Q +
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+KP++ F V +ACS+ VE + + G ++ +++ M G ++
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
A + + E D+ W ++ HG+
Sbjct: 560 AEKVFTRQE-ERDIVSWNSMITGYGQHGD 587
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 233/396 (58%), Gaps = 12/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
G E++E+ + K I+ + T S ++ AC + + K +H+ V ++ V
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
I+ MY +C ++ A F M E+++ SW M+ G+ +G ++A+++F + AG+
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 460
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F+ V +ACS G + EG F++MS ++ + P ++HY +VD+LG GYL EA
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAF 520
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
+ I+ M + PD VW L+ CRMH N++LG+ A + +LDP + +A
Sbjct: 521 DLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG 580
Query: 628 ELAKEKENKKLASQN----------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
++ E ++ +N L++++ +VH + GD HP+ +KIY + L ++
Sbjct: 581 RW-EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL 639
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+E GY+P+ VLHD+ E KE L HSE+LAV+ G++++ I I+KNLRVCGDCH
Sbjct: 640 QEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCH 699
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A+K ISKIV RE+++RD+KRFHHF+DGLCSC DYW
Sbjct: 700 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ + K + + TF +++C L + H+
Sbjct: 127 LARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPD 186
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-- 502
+ + ++ MYS+C + DA ++F ++ R++ SW +MITG+ +N A+ +F +F
Sbjct: 187 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLV 246
Query: 503 KQAGLKPDDQI------FIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
+++G + D ++ + V SACS ++ + V G L D G+ ++
Sbjct: 247 EESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTL---- 302
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+D G L + + M E DV W ++ +
Sbjct: 303 --MDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIAV 336
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ VD ++ AC + VH + + + N ++ Y++C + +
Sbjct: 257 VCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSR 316
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSAL 524
VF M ERD+ SW+++I +A+NG+ ++++IF + + G + + V AC+
Sbjct: 317 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 376
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G G + + K G+ ++ SI+DM G ++ A + ++M E +V W
Sbjct: 377 GSQRLGKCIHDQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR-EKNVKSWSA 434
Query: 585 LMNLCRMHGN 594
++ MHG+
Sbjct: 435 MVAGYGMHGH 444
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH 533
++ SW+++I A++G +A+ FS ++ LKP+ F +CSAL D+ G H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+++ +G P + ++VDM G L +A +++
Sbjct: 176 QQALI--FGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 213
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 234/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G EA+ + + K + T ++ ACG ALE + VH ++E
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 286
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MYS+C S++DA VF + ++D+ +W++MI G+A +G ++A+ +F
Sbjct: 287 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 346
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL P + FIG+ SAC G V EG F M +YGI P ++HY +V++LG
Sbjct: 347 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 406
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G++++A E ++ M +EPD +W L+ CR+HG + LG++ E++ +D + N +
Sbjct: 407 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYIL 464
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ + K+ KK + +EV +KVHE+ AG +HP+ +IY +
Sbjct: 465 LSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMM 524
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K GY P+T VLHDI + KE +L HSE+LA++ GL+++ I+I+KN
Sbjct: 525 LEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKN 584
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISKI GR++++RD RFHHF +G CSC DYW
Sbjct: 585 LRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + +L Y++ +D A +F M ERD W+ MI G+ +NG+ +A+ +F + +
Sbjct: 190 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 249
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A KP++ + V SAC LG + G S ++ GI ++ ++VDM G L+
Sbjct: 250 AKAKPNEVTVLSVLSACGQLGALESGRW-VHSYIENNGIQFNVHVGTALVDMYSKCGSLE 308
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A +K+ + DV W ++ MHG
Sbjct: 309 DARLVFDKID-DKDVVAWNSMIVGYAMHG 336
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 260/459 (56%), Gaps = 30/459 (6%)
Query: 328 RRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK 387
R Y N G Y SGN M+ ++ L + HE D S + G V+
Sbjct: 342 RDFYSWNTMIGAYVG-SGN----MVLAKELFDEMHERDVVSWS---------TIIAGYVQ 387
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
G EA++ + + + + T + AC + AL++ K +H ++ R +
Sbjct: 388 VGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRL 447
Query: 448 YNGILKMYSECDSMDDAFSVF-SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ MY++C +D A SVF + +R + W+ MI GFA +G E+A+++F + K
Sbjct: 448 LASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEK 507
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ P+ FI + +ACS V EG +FE M+ DYGI P ++HY +VD+L +G+L ++
Sbjct: 508 VSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDS 567
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKA 619
E I MPM PDV +W L+N CR++ ++E G R I++++DP+ + N S +
Sbjct: 568 EEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTS 627
Query: 620 GLVPVNASELAKEK-----ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
G N + + +EK + KK+ + +E+ HE+ GD SHP++ +IY+ + +
Sbjct: 628 G--RWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMI 685
Query: 675 AQMKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+++K AGY+PE VL D D+E KE AL HSE+LA++ GL+++ PIRI+KNLRVC
Sbjct: 686 SKLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVC 745
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GDCH A K ISK+ R +I+RD R+HHFKDG+CSC+DY
Sbjct: 746 GDCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
ACG+ + E + V H ++ V N ++ M+ + ++DA +VF + +RD S
Sbjct: 287 ACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYS 346
Query: 479 WDTM-------------------------------ITGFAKNGLGEDAVDIFSQFKQAGL 507
W+TM I G+ + G +A+D F + Q+ +
Sbjct: 347 WNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEV 406
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP++ + +ACS L + +G + +D I + + S++DM G +D A
Sbjct: 407 KPNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEIDSAS 465
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRLN 614
+ ++ V W ++ MHG E E VE++ P+++
Sbjct: 466 SVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVT 514
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 236/398 (59%), Gaps = 17/398 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVS 446
G +EA+ V +++ I D T ++ +C + +LEE H V L+ + VS
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ +Y +C S++DA +F M+ D SW +++G+A+ G ++ +D+F + G
Sbjct: 412 --NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKG 469
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+KPD FIGV SACS G V +G +F SM KD+GIVP HY ++D+ +G L EA
Sbjct: 470 VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEA 529
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
EFI++MPM PD W L++ CR+ G++E+G AE + ++DP N S L ++A
Sbjct: 530 EEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQ--NPASYVLLCSMHA 587
Query: 627 S-----ELA------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+ E+A ++++ KK + ++ ++KVH + A D SHP + IY + L +
Sbjct: 588 AKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNS 647
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+M E GY P+ VLHD+ K + HSE+LA++ GL+ P PIRI+KNLRVC D
Sbjct: 648 KMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVD 707
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K ISKI GR++++RDA RFH F DG+CSC D+W
Sbjct: 708 CHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EA+E+ + Q I++D TF ++ ACG ALE+ K +H ++ R
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C S+ A +VF MT +++ SW +I G+ +NG E+AV +FS
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI----VDM 556
+ ++ G+ PDD V S+C+ L + EG F ++ +V + HY+++ V +
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGA-QFHCLA----LVSGLMHYITVSNALVTL 417
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G G +++A ++M V W L++
Sbjct: 418 YGKCGSIEDAHRLFDEMSFHDQVS-WTALVS 447
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ C +++A +F MT+RD +W TM+TGF +NGL +A++IF + +
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRF 265
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ D F + +AC AL + +G
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQG 291
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA- 505
TYN +L + + D ++F++MT+RD+ S++ +I GF+ G AV ++ QA
Sbjct: 74 TYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQAD 133
Query: 506 -GLKPDDQIFIGVFSACSALGDVVEG 530
++P + A SALGD G
Sbjct: 134 SSVRPSRITMSTMVMAASALGDRALG 159
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 225/373 (60%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + AL + VH +VE++ N ++ +Y++C S++DA +F M
Sbjct: 909 TIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEM 968
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R + SW ++I G A NG G++A+++FS ++ L P + +GV ACS G V +G
Sbjct: 969 GLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDG 1028
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F+ M +DYGI P ++H +VD+LG G ++EA ++I MP+EP+ VW L+ C
Sbjct: 1029 FRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCA 1088
Query: 591 MHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGL---VPVNASELAKEKENKKLAS 640
MH LELG E + +LDP N + G+ V V + K++ K
Sbjct: 1089 MHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKN-PG 1147
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+L+E+R+ V+E+ GD SHPE+++IY ++ + +++ GYIP T VL DI++E KE
Sbjct: 1148 HSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKET 1207
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
AL HSERLA++ LL S PIRI+KNLR+CGDCH A +ISK+ RE+I+RD RFH
Sbjct: 1208 ALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFH 1267
Query: 761 HFKDGLCSCRDYW 773
HF+ G CSC+DYW
Sbjct: 1268 HFQGGACSCKDYW 1280
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T+ L+QAC AL E + +H + V N ++ +Y C + A VF
Sbjct: 803 DTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVF 862
Query: 469 SNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
M R +L SW++M+ FA NG + + +F + PD + V +AC+ G
Sbjct: 863 DEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGA 922
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + G+V + +++D+ G +++A E+M + V W L+
Sbjct: 923 LALGR-RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 981
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 245/401 (61%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G +EA++V + + V++ T+ + A +++ + +H V +
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ +Y++ S+ DA+ F++M+ER++ SW+ MITG++++G G +A+ +F +
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEE 756
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G+ P+ F+GV SACS +G V EG+ +FESM K + +VP +HYV +VD+LG G
Sbjct: 757 MKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAG 816
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LD A+E+I++MP+ D +W L++ C +H N+E+G+R A + +L+P S
Sbjct: 817 QLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISN 876
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ S+ + + +L K+ KK ++ +EV++ VH + AGD HP T++IY I
Sbjct: 877 IYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGH 936
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + E GY+ ++ +L++ +Q K+ HSE+LA++ GLLS PIR+MKNLRV
Sbjct: 937 LNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRV 996
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ +K +SKI R +I+RDA RFHHF G+CSC+D+W
Sbjct: 997 CNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLV++G A+E+ +++ C+ D T + L+ AC AL + +H H +
Sbjct: 334 ISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGM 393
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +L +YS+C ++ A F ++ W+ M+ + + D+ +IF Q
Sbjct: 394 SADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ 453
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLG 558
+ G+ P+ + + C++LG + G +H + + + YV ++DM
Sbjct: 454 MQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGF----QLNVYVCSVLIDMYA 509
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L AL + ++P E DV W ++
Sbjct: 510 KYGQLALALRILRRLP-EDDVVSWTAMI 536
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
QLD L ++ +++ G++ Q T+ +++ C AL + +H HV +
Sbjct: 440 QLDNLSDSFEIFRQMQMEGMIPNQ------FTYPSILRTCTSLGALYLGEQIHTHVIKTG 493
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V + ++ MY++ + A + + E D+ SW MI G+ ++ + +A+ +F
Sbjct: 494 FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFE 553
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G++ D+ F SAC+ + + +G +H +S + +G S+ + +++ +
Sbjct: 554 EMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALISLYAR 611
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + EA EK+ + ++ W L++
Sbjct: 612 CGRIQEAYLAFEKIGDKNNIS-WNSLVS 638
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + GL + G +EAI + + I S ++ A + E + +H V +
Sbjct: 230 VAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIK 289
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
NG++ +YS + A +FS M RD S++++I+G + G + A+++
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F++ ++ LKPD + SAC+++G + +GM S + G+ + S++D+
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGM-QLHSHAIKAGMSADIILEGSLLDLYS 408
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ A +F E ++ +W ++
Sbjct: 409 KCADVETAHKFFLXTETE-NIVLWNVML 435
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 412 TFSQLMQAC-GDAKALEEAKAVHEHVERL---LSPLRVSTYNGILKMYSECDSMDDAFSV 467
TF+ +++AC G A K VH SPL N ++ +YS+ ++ A V
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPL---VANLLIDLYSKNGYIESAKKV 217
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA---- 523
F+ + +D+ +W MI+G ++NGL E+A+ +F + + P + V SA +
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 524 -LGD----------------VVEGMLHFESMSKDY----GIVPSMK-----HYVSIVDML 557
LG+ V G++ S S+ I +M Y S++ L
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGL 337
Query: 558 GSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELG 598
G+ D ALE KM ++PD L++ C G L G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 62/119 (52%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ EA+++ +E + I D F+ + AC +AL + + +H
Sbjct: 535 MIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAG 594
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S N ++ +Y+ C + +A+ F + +++ SW+++++G A++G E+A+ +F
Sbjct: 595 FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 98/240 (40%), Gaps = 24/240 (10%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
+ N+ + +Q +++GK K I+++ +E++ + + + L++ C + +L E +
Sbjct: 22 ATNSHSFDQTTLHMEQGKSKR-IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRL 80
Query: 433 HEHVERLL---SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
H + + PL + + ++ Y A VF + R + SW+ MI F
Sbjct: 81 HCRISKSGFDGEPLLI---DSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ 137
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMK 548
+F + G+ P+ F GV AC GD+ + S + YG S
Sbjct: 138 KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPL 196
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW--------------EKLMNLCRMHGN 594
++D+ GY++ A + + M+ D+ W E ++ C MH +
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 230/390 (58%), Gaps = 10/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+++ ++ + D + S ++ ACGD A + +HE+VER + N ++
Sbjct: 289 EAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALI 348
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C + +A +VF M RD+ SW +MI+ + +G G+DAV +F + + +G PD
Sbjct: 349 DMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWI 408
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ V +ACS G V EG F M+ +YGI P ++HY +VD+LG G +DEA +
Sbjct: 409 AFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQ 467
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--P 623
MPMEP+ VW L++ CR++ ++ + A+ + QL P + N +KAG
Sbjct: 468 MPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDV 527
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+ K KK+ + +E+ V+ + AGD SH ++ +IY + L +MKE GY+
Sbjct: 528 ETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYM 587
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
PET LHD+++E KE L HSE+LA+ +L++ + IRI KN+RVCGDCH A K+I
Sbjct: 588 PETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLI 647
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SKI RE+IIRD RFHHF+DG+CSC DYW
Sbjct: 648 SKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 8/237 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G ++A+ V + Q D T+ +++AC + L +H V +L + +
Sbjct: 113 VNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNL 172
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
NG++ MY +C +D A V M RD+ SW++M+ G+A+NG DA+ + + +
Sbjct: 173 YIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDL 232
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
LKPD + A + + +L+ + M S+ + ++ + + +E
Sbjct: 233 KLKPDAGTMGSLLPAVT--NTSCDNVLYVKDMFVKLK-EKSLISWNVMIAVYVNNAMPNE 289
Query: 566 ALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
A++ +M +EPD ++ C LG R E VE +L P+ L E +
Sbjct: 290 AVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENA 346
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
+ CD++ +F + E+ L SW+ MI + N + +AVD++ Q + G++PD
Sbjct: 251 TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSIS 310
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V AC L V G E + + + P++ +++DM G L EA ++M M
Sbjct: 311 SVLPACGDLSAAVLGRRIHEYVERK-KLRPNLLLENALIDMYAKCGCLKEARAVFDQM-M 368
Query: 576 EPDVDVWEKLMNLCRMHG 593
DV W +++ M G
Sbjct: 369 FRDVVSWTSMISAYGMSG 386
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ Y+ C +F +T++++ ++ MI + NGL +DA+ +F G PD
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALE 568
+ + V ACS G++ G L G+ M Y+ +V M G +LD A
Sbjct: 137 NYTYPCVLKACSVSGNLWVG-LQIHGAVVKLGL--DMNLYIGNGLVSMYGKCKWLDAARR 193
Query: 569 FIEKMP 574
+++MP
Sbjct: 194 VLDEMP 199
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 217/372 (58%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T S + AC AL + VH +V R + + N ++ MYS+ +D A VF N
Sbjct: 615 TLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDN 674
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M +R+ SW +++TG+ +G GEDA+ +F + ++ L PD F+ V ACS G V G
Sbjct: 675 MPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHG 734
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ F MSKD+G+ P +HY +VD+ G G L EA++ I +MPMEP VW L++ CR
Sbjct: 735 INFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACR 794
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL---------AKEKENKKLASQ 641
+H N+ELG+ A + +L+ + + NA K KK
Sbjct: 795 LHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGC 854
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ ++ R V + GD SHP++ +IY + L ++K GY+P+T F LHD+D E K +
Sbjct: 855 SWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDL 914
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+++G+L+ RAPIRI KNLR+CGDCHSA+ ISKI+ E+I+RD+ RFHH
Sbjct: 915 LFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHH 974
Query: 762 FKDGLCSCRDYW 773
FK+G CSC+ YW
Sbjct: 975 FKNGSCSCKGYW 986
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA++V + ++ T L+ AC AL K H + + +
Sbjct: 472 ITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFIL 531
Query: 442 PLR--------VSTYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGL 491
L + NG++ MY++C S + A +F +++ +RD+ +W MI G+A++G
Sbjct: 532 NLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGD 591
Query: 492 GEDAVDIFS-QFKQ-AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMK 548
+A+ +FS FK +KP+D AC+ L + G +H + YG S+
Sbjct: 592 ANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG---SVM 648
Query: 549 HYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
+V+ ++DM +G +D A + MP V W LM MHG E R
Sbjct: 649 LFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVS-WTSLMTGYGMHGRGEDALRV----- 702
Query: 607 QLDPSRLNEKSKAGLVP 623
+E K LVP
Sbjct: 703 ------FDEMRKVPLVP 713
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+ + +S D+ + ++ AC A + VH R V N ++ MY++C
Sbjct: 354 MTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCG 413
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
M++A VF M +D+ SW+ M+TG+++ G E A+ +F + + ++ D + V +
Sbjct: 414 KMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT 473
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ G E + F M D G P++ VS++ S G L
Sbjct: 474 GYAQRGQGCEALDVFRQMC-DCGSRPNVVTLVSLLSACVSVGAL 516
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + +AC + +L ++H V R V N ++ MY +C ++ A ++F ++
Sbjct: 261 TFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL 320
Query: 472 TER---DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI-FIGVFSACSALGDV 527
R DL SW+++++ + A+ +F + L D I + + AC++L
Sbjct: 321 CHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAAS 380
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G S G+V + ++VDM G ++EA + ++M + DV W ++
Sbjct: 381 LRGR-QVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVT 438
Query: 588 LCRMHGNLE 596
G LE
Sbjct: 439 GYSQAGRLE 447
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 217/373 (58%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F+ + AC ALE + +H + L +S N ++ MY++C ++ A SVF M
Sbjct: 427 AFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM 486
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
DL SW++MI ++G G A+++F Q + G+ PD F+ V +ACS G V +G
Sbjct: 487 PSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGR 546
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM + YGI P HY +VD+ G A I+ MP +P VWE L+ CR+
Sbjct: 547 HYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRI 606
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
HGN++LG AE + +L P N+ + L + A +L +++ +K +
Sbjct: 607 HGNMDLGIEAAEQLFKLMPQ--NDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPA 664
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +EV +KVH + D HPE +Y + L +MK+ GYIP+T+FVLHD++ E KE
Sbjct: 665 CSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEH 724
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
AL HSE+LAV G++ P A +R+ KN+R+CGDCH+A K +SK+ RE+I+RD KRFH
Sbjct: 725 ALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFH 784
Query: 761 HFKDGLCSCRDYW 773
HFK+G CSCRDYW
Sbjct: 785 HFKNGDCSCRDYW 797
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 51/288 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G V G +EA+ + + I D T++ ++ AC + + + K +H ++ +
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE 319
Query: 439 --------------LLS------------------PLR-VSTYNGILKMYSECDSMDDAF 465
L++ P+R + T+N IL Y M++A
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
S F M ++L + MI+G A+NG G++ + +F Q + G +P D F G +ACS LG
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + + Y S+ + +++ M G ++ A MP D+ W
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGN--AMISMYAKCGVVEAAESVFVTMP-SVDLVSWNS 496
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSR------LNEKSKAGLV 622
++ HG+ +EL D+ + E + P R L S AGLV
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLK--EGVFPDRITFLTVLTACSHAGLV 542
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+ ++ Y D ++ A VF M E +W+ MI+G+ G ++A+ + + + G
Sbjct: 225 TWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLG 284
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYL 563
++ DD + + SAC+ +G G +H + + S VS ++ + +
Sbjct: 285 IQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKV 344
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
DEA + MP+ ++ W +++
Sbjct: 345 DEARKIFYAMPVR-NIITWNAILS 367
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
RD ++ MITG+A NG G A+++F ++ +PDD F V SA
Sbjct: 110 RDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA 156
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 234/402 (58%), Gaps = 10/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K G +EA+ + + + I D T + A +LE A+ + ++V +
Sbjct: 327 MISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSN 386
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C S++ A VF +++D+ W MI G+ +G G +A++++
Sbjct: 387 YGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYH 446
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
KQAG+ P+D FIG+ +AC+ G V EG F M KD+ IVP +HY +VD+LG
Sbjct: 447 VMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRA 505
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
GYL EA FI K+P+EP V VW L++ C+++ + LG+ A + LDP S
Sbjct: 506 GYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLS 565
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L S + L +EK K +++E+ K+ + GD SHP +I+ ++
Sbjct: 566 NLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQ 625
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++KE G++P T VLHD++ E KEE L HSER+AV++GL+S+ +RI KNLR
Sbjct: 626 RLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLR 685
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C +CHSA+K+ISK+V RE+I+RDA RFHHFKDGLCSC DYW
Sbjct: 686 ACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + GK EA+ + + + D +++A D LE+ +++H V ++
Sbjct: 227 ISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGL 286
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + Y++C + A S F M ++ W+ MI+G+AKNG E+AV++F
Sbjct: 287 EDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHY 346
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY-------VSIV 554
+KPD + V SA A V G L DY S +Y S++
Sbjct: 347 MISRNIKPDS---VTVRSAVLASAQV--GSLELAQWMDDY---VSKSNYGSDIFVNTSLI 398
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G ++ A ++ + DV +W ++ +HG
Sbjct: 399 DMYAKCGSVEFARRVFDRNS-DKDVVMWSAMIMGYGLHG 436
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++ +E+ + + D TF +++AC + + +H + + V NG+
Sbjct: 136 RDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGL 195
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y++C + A VF + R + SW ++I+G+A+NG +A+ +FSQ + G+KPD
Sbjct: 196 VALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDW 255
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ + A + + D+ +G G+ +S+ G + A F +
Sbjct: 256 IALVSILRAYTDVDDLEQGR-SIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFD 314
Query: 572 KMPMEPDVDVWEKLMN 587
+M +V +W +++
Sbjct: 315 QMK-TTNVIMWNAMIS 329
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 234/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G EA+ + + K + T ++ ACG ALE + VH ++E
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MYS+C S++DA VF + ++D+ +W++MI G+A +G ++A+ +F
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL P + FIG+ SAC G V EG F M +YGI P ++HY +V++LG
Sbjct: 281 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 340
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G++++A E ++ M +EPD +W L+ CR+HG + LG++ E++ +D + N +
Sbjct: 341 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYIL 398
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ + K+ KK + +EV +KVHE+ AG +HP+ +IY +
Sbjct: 399 LSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMM 458
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K GY P+T VLHDI + KE +L HSE+LA++ GL+++ I+I+KN
Sbjct: 459 LEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKN 518
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISKI GR++++RD RFHHF +G CSC DYW
Sbjct: 519 LRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + +L Y++ +D A +F M ERD W+ MI G+ +NG+ +A+ +F + +
Sbjct: 124 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 183
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A KP++ + V SAC LG + G S ++ GI ++ ++VDM G L+
Sbjct: 184 AKAKPNEVTVLSVLSACGQLGALESGRW-VHSYIENNGIQFNVHVGTALVDMYSKCGSLE 242
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A +K+ + DV W ++ MHG
Sbjct: 243 DARLVFDKID-DKDVVAWNSMIVGYAMHG 270
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 243/402 (60%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+++EA+ + + + + VD T L+ AC AL++ +A+H +E+ L
Sbjct: 343 MMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL 402
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +L MY +C +D+A VF M +RD+ +W MI G A NG+G+ A++ F
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFY 462
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + G +P+ +I V +ACS + EG L+F+ M Y I P ++HY ++D+LG +
Sbjct: 463 QMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRS 522
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEA++ ++ MP++P+ +W +++ CR+H +++L AE + +L+P +
Sbjct: 523 GLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLY 582
Query: 621 LVPV------NASE---LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ + NAS+ L +E++ KK A + + V +VH++ D SHP +I A++
Sbjct: 583 NIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLE 642
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K GY P T + D+D+E KE+ALLAHSE+LA++ GL++ P+ I KNLR
Sbjct: 643 EISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLR 702
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHSA+K+IS++ RE+I+RD RFHHF++G CSC D+W
Sbjct: 703 VCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ + +EA+ + I+ D T ++ AC K LE +++H VE P +
Sbjct: 216 RANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSEN 275
Query: 447 TYNGILKMYSEC----------DSM----------------------DDAFSVFSNMTER 474
++ MY++C D++ D A S+F M R
Sbjct: 276 LVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVR 335
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH 533
D+ ++++M+TG+ +G +A+ +F ++ L+ D+ + + +AC++LG + +G LH
Sbjct: 336 DIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALH 395
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ + + + +++DM G +DEA ++M + DV W ++
Sbjct: 396 --ACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRDVHTWTAMI 445
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+G+ KM CD+ + S RD+ SW ++I +++ +AV F G+
Sbjct: 181 SGLAKMGMLCDTQ----LLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIA 236
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
PD+ I V SAC+ L D+ G LH + ++ G+ S V+++DM G A
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHL--LVEEKGMPTSENLVVALIDMYAKCGDFGHAQ 294
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
+ + + P W +++ HG++++
Sbjct: 295 QVFDALGRGPRPQSWNAIIDGYCKHGHVDVA 325
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 247/404 (61%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + GK +EA+ + + + I D T L+ AC AL K VH ++ ++
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + N +L +Y+ C +++A ++F M +++ SW ++I G A NG G++A+++F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 502 FKQA-GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL P + F+G+ ACS G V EG +F M ++Y I P ++H+ +VD+L
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + +A E+I+ MPM+P+V +W L+ C +HG+ +L + + QL+P+ +
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN--HSGDYVL 298
Query: 621 LVPVNASE-----LAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + ASE + K ++ KK+ +L+EV ++VHE+ GD SHP++D IYA
Sbjct: 299 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 358
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ + +++ GY+P+ V D+++E KE A++ HSE++A++ L+S+P R+PI ++KN
Sbjct: 359 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 418
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A+K++SK+ RE+++RD RFHHFK+G CSC+DYW
Sbjct: 419 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y+ C + A+ VF M E+DL +W+++I GFA+NG E+A+ ++++ G+K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD + + SAC+ +G + G M K G+ ++ ++D+ G ++EA
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 569 FIEKMPMEPDVDVWEKLM 586
++M + V W L+
Sbjct: 146 LFDEMVDKNSVS-WTSLI 162
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 224/374 (59%), Gaps = 15/374 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC A AL E VH+H+ V + MY C S++ A +F +
Sbjct: 533 TCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKV 592
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
ERD+ ++ MI +++NGL +A+ +F + +Q G +PD+Q F+ V SACS G EG
Sbjct: 593 AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG 652
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F SM + YGI PS HY VD+LG G+L +A E I M ++P V VW+ L+ CR
Sbjct: 653 WEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACR 712
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV--------NASELAKEKENKKL---A 639
+ +++ G +V +LDP +E + L + A+E+ E E++ L A
Sbjct: 713 KYRDVDRGRLANSMVRELDPG--DESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQA 770
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
++ +E++S+VHE+ AGD SHP +++IY + L A+++E GY+P+TR VL +D+ KE
Sbjct: 771 GKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKE 830
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
L HSERLA++ G++SS +R+MKNLRVC DCH+A K ISKIV +E+++RD RF
Sbjct: 831 RLLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRF 889
Query: 760 HHFKDGLCSCRDYW 773
HHF DG CSC DYW
Sbjct: 890 HHFVDGSCSCGDYW 903
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 409 DLPTFS----------QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
DLP+ S +L++A GD + L + + +H + L L N +L++Y +C
Sbjct: 18 DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSL--GLEEELGNHLLRLYLKC 75
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+S+ D VFS + RD SW T+IT + ++G + A+ +F + +Q G++ D F+ V
Sbjct: 76 ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVL 135
Query: 519 SACSALGDVVEGM-LH---FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
AC+ LGD+ +G +H ES + ++ ++ ++ + GS G + A+ E+
Sbjct: 136 KACARLGDLSQGRSIHAWIVESGLEGKSVLANL-----LLHIYGSCGCVASAMLLFER-- 188
Query: 575 MEPDVDVWEKLMNLCRMHGNLELG 598
ME D+ W + G+L++
Sbjct: 189 MERDLVSWNAAIAANAQSGDLDMA 212
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG----DAKALEEAKAVHEHVE 437
+ G ++G++K A+E+ ++ + ++ T+ L++A +A+A+ E + +H +
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN--MTER-DLTSWDTMITGFAKNGLGED 494
+ ++KMY+ C ++D+A + F M +R D+ SW+ +I+ +++G G+
Sbjct: 455 SCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKR 514
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
A+ F + G+ P+ + V AC+ + EG++ + + + G+ ++ ++
Sbjct: 515 ALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHL-RHSGMESNVFVATALA 573
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G G L+ A E EK+ +E DV ++ ++
Sbjct: 574 SMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ K AI + ++++ + D TF +++AC L + +++H + +
Sbjct: 107 GQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLA 166
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y C + A +F M ERDL SW+ I A++G + A+++F + + G++
Sbjct: 167 NLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVR 225
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P + S C+ + S+ ++ G+ ++ ++ G+LD+A E
Sbjct: 226 PARITLVITLSVCAK----IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKE 281
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNL 595
++ E DV W ++ HG++
Sbjct: 282 VFDR-AAERDVVSWNAMLGAYAQHGHM 307
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 50/303 (16%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLR 444
+ G + A+E+ ++ + + T + C + +A+A+H V L L
Sbjct: 205 QSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLV 261
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VST + Y+ +D A VF ERD+ SW+ M+ +A++G +A +F++
Sbjct: 262 VST--ALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLH 319
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK--DYGIVPSMKHYVSIVDMLGSTGY 562
G+ P + + CS+L M+H ++ K D IV +++DM G
Sbjct: 320 EGIPPSKVTLVNASTGCSSLR--FGRMIHACALEKGLDRDIVLGN----ALLDMYTRCGS 373
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
+EA E +P + W ++ G ++ R E+ +++ G+
Sbjct: 374 PEEARHLFEGIP--GNAVSWNTMIAGSSQKGQMK---RALELFQRMQLE--------GMA 420
Query: 623 PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
PV A+ L NLLE S+PE + A R L +++ GY
Sbjct: 421 PVRATYL------------NLLE----------AVASNPEEARAMAEGRKLHSRIVSCGY 458
Query: 683 IPE 685
E
Sbjct: 459 ASE 461
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 242/397 (60%), Gaps = 13/397 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRV 445
++G+ KE + L + + TF+ ++ AC D A + K VH ++ R+ P
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSF 333
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ + ++ +YS+C + + A VF+ M DL SW ++I G+A+NG + A+ F ++
Sbjct: 334 AA-SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G KPD+ F+GV SAC+ G V G+ +F S+ + +G+V + HY ++D+L +G E
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEKSK 618
A I+ MPM+PD +W L+ CR+HGN+EL +R A+ + +L+P + N +
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYAN 512
Query: 619 AGLVPVNASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
AGL +++ + +N+ K ++ +E++ +VH + GDTSHP+ I+ + L
Sbjct: 513 AGLW-TEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSK 571
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+MKE GY+ +T FVLHD+++E KE+ + HSE+LAV+ G++S+ PI++ KNLR C D
Sbjct: 572 KMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVD 631
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
CH+A+K ISKIV R++I+RD+ RFH F DG CSC+DY
Sbjct: 632 CHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 13/235 (5%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL-EKQCISVDLP 411
A ++ + H D+F+ + + G V +G EA+++ ++ E + + ++
Sbjct: 148 ARKLFDEMPHRDNFSWNA----------VISGYVSQGWYMEALDLFRMMQENESSNCNMF 197
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S + A +L K +H ++ R L + +L +Y +C S+++A +F M
Sbjct: 198 TLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM 257
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ SW TMI ++G ++ +F +G++P++ F GV +AC+ L G
Sbjct: 258 ADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGK 317
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M++ G P ++V + G + A +MP PD+ W L+
Sbjct: 318 EVHGYMTR-VGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 50/296 (16%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
E ++ ++ ++KEA++ L + + + +S L+ AC + LE K VH H +
Sbjct: 37 EIIELFCQQNRLKEAVDYLHRIPQPSPRL----YSTLIAACLRHRKLELGKRVHAHTKAS 92
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N ++ MY++C S+ DA +F + ++DL SW+TMI+G+A G E A +F
Sbjct: 93 NFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLF 152
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD------------------- 540
+ D+ + V S + G +E + F M ++
Sbjct: 153 DEMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAA 208
Query: 541 ------------YGIVPSMKH----YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
Y I ++ + +++D+ G G L+EA ++M + D+ W
Sbjct: 209 ISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA-DKDIVSWTT 267
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPS--RLNEKSKAGLVPVNASELAKEKENKKL 638
+++ C G + G + L S R NE + AG++ A +LA E+ K++
Sbjct: 268 MIHRCFEDGRKKEG---FSLFRDLMGSGVRPNEYTFAGVLNACA-DLAAEQMGKEV 319
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 252/429 (58%), Gaps = 15/429 (3%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
+N C E FA S + + G + + +A++++ + ++ +D TF+ +
Sbjct: 1114 MNEC--EKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATV 1171
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ AC LE VH R V + ++ MYS+C +D A F M R++
Sbjct: 1172 LSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 1231
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI-FIGVFSACSALGDVVEGMLHFE 535
SW++MI+G+A++G GE A+ +F++ G PD +GV SACS +G V EG HF+
Sbjct: 1232 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFK 1291
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG- 593
SMS+ Y + P ++H+ +VD+LG G LDE +FI MPM+P+V +W ++ CR +G
Sbjct: 1292 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGR 1351
Query: 594 NLELGDRCAEIVEQLDP-SRLNEKSKAGLVP--------VNASELAKEKENKKLASQNLL 644
N ELG R AE++ +L+P + +N A + A KE KK A + +
Sbjct: 1352 NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWV 1411
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
++ VH + AGD HPE D IY +R L +M++AGYIP+T++ L D++ E KEE L
Sbjct: 1412 TMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSY 1471
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE++AV+ +L+ + PIRIMKNLRVCGDCHSA ISKIVGR++++RD+ RFHHF+D
Sbjct: 1472 HSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFED 1530
Query: 765 GLCSCRDYW 773
G CSC DYW
Sbjct: 1531 GKCSCGDYW 1539
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK----AVHEHVERL 439
GLVK+ + + A +V + K + ++ ++ L+ A + LEE + VH HV R
Sbjct: 830 GLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRT 888
Query: 440 -LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+ +V+ NG++ MY++ ++ DA SVF M E+D SW+++I+G +N EDA +
Sbjct: 889 GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAES 948
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
F + ++ G P + I S+C++LG ++ G +H + + G+ + +++ +
Sbjct: 949 FLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK--LGLDTDVSVSNALLALY 1006
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
TG E L+ MP E D W ++
Sbjct: 1007 AETGCFTECLKVFSLMP-EYDQVSWNSVI 1034
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 445 VSTYNGILKMYSEC-DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY C DS +DA SVF + R+ SW+++I+ +++ G A D+FS +
Sbjct: 682 VVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQ 741
Query: 504 QAGL----KPDDQIFIGVFSACSALGD----VVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ GL KP++ F + +A + D V+E ML + + G + + ++V
Sbjct: 742 KEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQML---ARVEKSGFLQDLYVGSALVS 798
Query: 556 MLGSTGYLDEALEFIEKM 573
G D+A E+M
Sbjct: 799 GFARFGLTDDAKNIFEQM 816
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+ + EEA+ +H + + N ++ +Y + A +F M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ R+L +W +I+G+ +NG ++A F +AG P+ F AC
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 154/397 (38%), Positives = 237/397 (59%), Gaps = 19/397 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNG 450
+EA+ + ++ + + + TF ++ AC AL+ K VH ++++ L + S +
Sbjct: 346 EEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS 405
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL-KP 509
++ MY++C ++ A VF +M R+L SW+ M++GFA +G E A+ +FS+ GL +P
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRP 465
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
DD F+GV SAC+ G V G +F SM +DYGI P ++HY ++D+L +EA
Sbjct: 466 DDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL 525
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA--- 626
++ M MEPD +W L++ C+ HG +E G+ AE + QL+P E + A ++ N
Sbjct: 526 MKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEP----ENAGAFVLLSNIYAG 581
Query: 627 ----SELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
++A+ +K KK+ +E+ VHE+ GD HPE + IY ++ +
Sbjct: 582 AGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKL 641
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
++E G++P T VL+D+D+E KE AL HSE+LA+S GL+ + IRI+KNLRVCG+C
Sbjct: 642 LEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNC 701
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HSA K+ISKI RE+I RD RFHHFKDG CSC D W
Sbjct: 702 HSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +EAI +++ + + T ++ ACG ++ E K + V
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY +C D A +F + E+D+ SW+TMI G++ L E+A+ +F
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ +KP+D F+G+ AC+ LG + G + K+ + + S++DM
Sbjct: 354 VMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKC 413
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G + EA E + + ++ W +++ MHG+ E
Sbjct: 414 GCI-EAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM---------- 461
TF L ++C AKA E K +H H +L + ++ MY+ M
Sbjct: 133 TFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKS 192
Query: 462 ---------------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
DDA +F + +D+ SW+ MI+G+ ++G E+A+ F
Sbjct: 193 SLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFY 252
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGML--HFESMSKDYGIVPSMKHYVSIVDMLG 558
+ ++A + P+ + V SAC G G L S +D G +++ +++DM
Sbjct: 253 EMQEANVLPNKSTMVVVLSAC---GHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYC 309
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G D A E + + E DV W ++
Sbjct: 310 KCGETDIARELFDGIE-EKDVISWNTMI 336
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 233/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G EA+ + + K + T ++ ACG ALE + VH ++E
Sbjct: 174 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 233
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MYS+C S++DA VF + ++D+ +W++MI G+A G ++A+ +F
Sbjct: 234 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFK 293
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL P + FIG+ SAC G V EG F M +YGI P ++HY +V++LG
Sbjct: 294 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 353
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G++++A E ++ M +EPD +W L+ CR+HG + LG++ E++ +D + N +
Sbjct: 354 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL--VDQNLANSGTYIL 411
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ + K+ KK + +EV +KVHE+ AG +HP+ +IY +
Sbjct: 412 LSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMM 471
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K GY P+T VLHDI + KE +L HSE+LA++ GL+++ I+I+KN
Sbjct: 472 LEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKN 531
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISKI GR++++RD RFHHF +G CSC DYW
Sbjct: 532 LRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + +L Y++ +D A +F M ERD W+ MI G+ +NG+ +A+ +F + +
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 196
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A KP++ + V SAC LG + G S ++ GI ++ ++VDM G L+
Sbjct: 197 AKAKPNEVTVLSVLSACGQLGALESGRW-VHSYIENNGIQFNVHVGTALVDMYSKCGSLE 255
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+A +K+ + DV W ++
Sbjct: 256 DARLVFDKID-DKDVVAWNSMI 276
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 247/404 (61%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + GK +EA+ + + + I D T L+ AC AL K VH ++ ++
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + N +L +Y+ C +++A ++F M +++ SW ++I G A NG G++A+++F
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313
Query: 502 FKQA-GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL P + F+G+ ACS G V EG +F M ++Y I P ++H+ +VD+L
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + +A E+I+ MPM+P+V +W L+ C +HG+ +L + + QL+P+ +
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN--HSGDYVL 431
Query: 621 LVPVNASE-----LAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + ASE + K ++ KK+ +L+EV ++VHE+ GD SHP++D IYA
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ + +++ GY+P+ V D+++E KE A++ HSE++A++ L+S+P R+PI ++KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A+K++SK+ RE+++RD RFHHFK+G CSC+DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ V GL+E D T+ L++A + + +H V R + N +L +
Sbjct: 111 MRVSGLVEP-----DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHL 165
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y+ C + A+ VF M E+DL +W+++I GFA+NG E+A+ ++++ G+KPD
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ + SAC+ +G + G M K G+ ++ ++D+ G ++EA ++M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 575 MEPDVDVWEKLM 586
+ V W L+
Sbjct: 285 DKNSVS-WTSLI 295
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 461 MDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL-KPDDQIFIGVF 518
M A VFS + + ++ W+T+I G+A+ G A ++ + + +GL +PD + +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 519 SACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
A + + DV G +H + +G + +++ S++ + + G + A + +KMP E
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQN--SLLHLYANCGDVASAYKVFDKMP-EK 185
Query: 578 DVDVWEKLMN 587
D+ W ++N
Sbjct: 186 DLVAWNSVIN 195
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 236/403 (58%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERL 439
L GL + ++A+EV L K+ + + TFS ++ AC + A +E K +H +
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + +L MYS+ +++ A VF+ ERD+ SW++MITG+ ++G + A+++F
Sbjct: 536 GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVF 595
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ GL DD FIGV +AC+ G V EG +F M KDY I +HY +VD+
Sbjct: 596 QIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSR 655
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP--------- 610
G D+A++ I MP +W L+ CR+H NLELG AE + L P
Sbjct: 656 AGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLL 715
Query: 611 SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S ++ + + +L E++ KK A + +E+++++ + AGD SHP +D +YA +
Sbjct: 716 SNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKL 775
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++K+ GY P+T +V HD+++E KE L HSERLA+++GL++ P API+I KNL
Sbjct: 776 EELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNL 835
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCH+ +++IS I R LI+RD+ RFHHFK G+CSC YW
Sbjct: 836 RICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G E I ++ ++ + ++ + TF+ ++ A D +E VH + +
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY + + + DA +VF +M RD +W+ MI G+A G + +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
+ AG+K +F CS
Sbjct: 297 MRLAGVKLSRTVFCTALKLCS 317
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 7/183 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ + F ++ C + L K +H V + ++ YS+C S+D+AF
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361
Query: 466 SVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+FS ++ +W MI GF +N + AVD+F Q + G++P+ + V + +
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS- 420
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ LH + + Y VPS+ +++D TG + E+ +P + D+ W
Sbjct: 421 --SLLSQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSA 475
Query: 585 LMN 587
++
Sbjct: 476 MLT 478
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYN 449
+EA+ + L + VD T S ++ CG ++ H + L S VS
Sbjct: 86 REALHLFKDLHSSGLGVDGLTLSCALKVCG--VLFDQVVGRQVHCQSLKSGFLEDVSVGT 143
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY + + +D +F M +++ SW ++++G+A+NGL ++ + + +Q + G+ P
Sbjct: 144 SLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNP 203
Query: 510 DDQIFIGVFSACSALGD--VVEGMLHFESM 537
+ F V AL D ++EG + +M
Sbjct: 204 NGFTFATVL---GALADESIIEGGVQVHAM 230
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 343 YSGNIQNGMMASQVLNNCKHEDD----FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVL 398
++ +I+ +M + + C D+ F+ A + + G V+ K+A+++
Sbjct: 339 FAQDIRTALMVTY--SKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLF 396
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
+ ++ + + T+S ++ G +L +H + + S +L Y +
Sbjct: 397 CQMSREGVRPNHFTYSTVL--AGKPSSL--LSQLHAQIIKAYYEKVPSVATALLDAYVKT 452
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
++ ++ VF ++ +D+ +W M+TG A+ E A+++F Q + G+KP++ F V
Sbjct: 453 GNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
+ACS+ VE + + G ++ +++ M G ++ A + + E D
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERD 571
Query: 579 VDVWEKLMNLCRMHGN 594
+ W ++ HG+
Sbjct: 572 IVSWNSMITGYGQHGD 587
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 237/405 (58%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G G KEAI++ ++++ + D T ++ AC ALE + V V+R
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L +P+ + ++ +Y++C SM A+ VF M E+D W+ +I+G A NG + +
Sbjct: 345 FLYNPVLGT---ALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F Q ++ G+KPD FIG+ C+ G V EG +F SM + + + PS++HY +VD+L
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLL 461
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------S 611
G G LDEA + I MPME + VW L+ CR+H + +L + + + +L+P
Sbjct: 462 GRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYV 521
Query: 612 RLNEKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L+ A L A+++ EK +K + +EV VHE+ GD HP ++KIYA
Sbjct: 522 LLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYA 581
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +MK AGY+P T FVL DI++E KE L HSE+LA++ GL+S+ A IR++K
Sbjct: 582 KLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVK 641
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH A+K+IS I GRE+ +RD RFH F++G CSC DYW
Sbjct: 642 NLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 12/221 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + GK +EAI++ L + ++ D T +++ AC L + +H+ + +
Sbjct: 185 ISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MY++C +M+ A SVF M E+D+ SW MI G+A NGL ++A+D+F Q
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++ +KPD +GV SAC+ LG + V G++ ++ P + +++D+
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD----RNEFLYNPVLG--TALIDL 358
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
G + A E + M E D VW +++ M+G +++
Sbjct: 359 YAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKI 398
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 4/207 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV +AIE GL+ + + TF +++AC L+ +H V +
Sbjct: 83 MIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG 142
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ +Y++C ++DA VF ++ ++++ SW +I+G+ G +A+D+F
Sbjct: 143 FDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFR 202
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + L PD + V SAC+ LGD+ G +H M + G+V ++ S+VDM
Sbjct: 203 RLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM--EMGMVRNVFVGTSLVDMYAK 260
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +++A + MP E D+ W ++
Sbjct: 261 CGNMEKARSVFDGMP-EKDIVSWGAMI 286
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 449 NGILKMYSEC--DSMDDAFS--VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
N +L M C D D ++ +F + + ++ W+TMI G N +DA++ + +
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G P++ F V AC+ L D+ G + ++ G + S+V + GYL+
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLG-VKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
+A + + +P + +V W +++
Sbjct: 165 DAHKVFDDIP-DKNVVSWTAIIS 186
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 219/375 (58%), Gaps = 16/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + AC ALE + +H V L V ++ MYS+C S+++A VF++
Sbjct: 259 TVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDT 318
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEG 530
+D+ +W+ MITG+A +G +DA+ +F + + GL+P D FIG AC+ G V EG
Sbjct: 319 PRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEG 378
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ FESM ++YGI P ++HY +V +LG G L A E I+ M ME D +W ++ C+
Sbjct: 379 IQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCK 438
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP------------VNASELAKEKENKKL 638
+HG LG EI E L ++ L+ L KEK K
Sbjct: 439 LHGEFMLGK---EIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKE 495
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ +KVHE+RAGD H ++ +IY ++R + ++K GY+P T VLHD+++ K
Sbjct: 496 PGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEK 555
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E +L HSERLA+++GL+S+ +P++I KNLRVC DCH+ K+ISKI GR++++RD R
Sbjct: 556 ERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNR 615
Query: 759 FHHFKDGLCSCRDYW 773
FHHF DG CSC D+W
Sbjct: 616 FHHFSDGSCSCDDFW 630
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL- 507
++ Y++ +++ A ++F M ERD+ SW+ MI G++++G DA+ +F + G
Sbjct: 194 TAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKP 253
Query: 508 KPDDQIFIGVFSACSALGDVVEG-MLH-FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
KPD+ + SACS +G + G +H F + S+ I ++K +++DM G L+E
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSR---IRLNVKVCTALIDMYSKCGSLEE 310
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A+ P + D+ W ++ MHG
Sbjct: 311 AVLVFNDTPRK-DIVAWNAMITGYAMHG 337
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 264/506 (52%), Gaps = 32/506 (6%)
Query: 289 GQHQQALSGHYS-GNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNI 347
G+H +ALS Y G+ N + ++ + + RQ + + + ++
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI-FDAHV 441
Query: 348 QNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIE 396
NG++ A++V C D A S + L Q D EG +K +E
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT----ALSQCDH--GEGAIKLFME 495
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L ++ + D S L+ AC A E+ K VH H+ + N ++ Y+
Sbjct: 496 ML----RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C S++DA FS++ ER + SW MI G A++G G+ A+++F + G+ P+
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V AC+ G V E +F SM + +GI + +HY ++D+LG G LD+A+E + MP +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNAS 627
+ +W L+ R+H + ELG AE + L+P + N + AG+
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVR 731
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+L K+ KK + + +EV+ KVH + GD SHP T +IYA + L M +AG++P
Sbjct: 732 KLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVD 791
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
LHD+D+ KE L HSERLAV+ LLS+P APIR+ KNLR+C DCH A K ISKIV
Sbjct: 792 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIV 851
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
RE+IIRD RFHHF+DG CSC DYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ VK + +AI+V G + I FS ++ AC ++ +E + VH V R+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V T N ++ MY + +D A +F M + D+ SW+ +I+G NG A+++ Q
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
K +GL P+ + ACS LG + G M+ + S DY V +VD
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY-------IGVGLVD 346
Query: 556 MLGSTGYLDEALEFIEKM 573
M +LD+A + + M
Sbjct: 347 MYAKNHFLDDARKVFDWM 364
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY MDDA VF+ +ER+ SW+ +++ + KN DA+ +F +
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G++P + F V +AC+ ++ G +M G + ++VDM G +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGR-QVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D A EKMP + DV W L++ C ++G+ R E++ Q+ S GLVP
Sbjct: 254 DIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQMKYS--------GLVP 301
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ EA+ + L K+ + V+ T + ++++ +A + VH ++
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
NG++ Y +C + DA VF + D+ + +MIT ++ GE A+ +F +
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
+ GL+PD + + +AC++L
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASL 518
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G AIE+L ++ + ++ T S +++AC A A + + +H + + +
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF M RDL + +I+G + G ++A+ +F +
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
++ GL + V + ++L
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASL 417
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 10/178 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T SQ + A+AL H H L S S N ++ YS+C A VF +
Sbjct: 6 TISQQLTRYAAAQAL--LPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC--SALGDVVE 529
+ SW +++T ++ NGL A+ F + G+ ++ V + LG V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVH 123
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M D + ++ V M G G++D+A + E + W LM+
Sbjct: 124 AMAMATGFGSDVFVANAL------VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 264/506 (52%), Gaps = 32/506 (6%)
Query: 289 GQHQQALSGHYS-GNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNI 347
G+H +ALS Y G+ N + ++ + + RQ + + + ++
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI-FDAHV 441
Query: 348 QNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIE 396
NG++ A++V C D A S + L Q D EG +K +E
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT----ALSQCDH--GEGAIKLFME 495
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L ++ + D S L+ AC A E+ K VH H+ + N ++ Y+
Sbjct: 496 ML----RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C S++DA FS++ ER + SW MI G A++G G+ A+++F + G+ P+
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V AC+ G V E +F SM + +GI + +HY ++D+LG G LD+A+E + MP +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNAS 627
+ +W L+ R+H + ELG AE + L+P + N + AG+
Sbjct: 672 ANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVR 731
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+L K+ KK + + +EV+ KVH + GD SHP T +IYA + L M +AG++P
Sbjct: 732 KLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVD 791
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
LHD+D+ KE L HSERLAV+ LLS+P APIR+ KNLR+C DCH A K ISKIV
Sbjct: 792 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIV 851
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
RE+IIRD RFHHF+DG CSC DYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ VK + +AI+V G + I FS ++ AC ++ +E + VH V R+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY 233
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V T N ++ MY + +D A +F M + D+ SW+ +I+G NG A+++ Q
Sbjct: 234 DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
K +GL P+ + ACS LG + G M+ + S DY V +VD
Sbjct: 294 MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY-------IGVGLVD 346
Query: 556 MLGSTGYLDEALEFIEKM 573
M +LD+A + + M
Sbjct: 347 MYAKNHFLDDARKVFDWM 364
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY MDDA VF+ +ER+ SW+ +++ + KN DA+ +F +
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G++P + F V +AC+ ++ G +M G + ++VDM G +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGR-QVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D A EKMP + DV W L++ C ++G+ R E++ Q+ S GLVP
Sbjct: 254 DIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQMKYS--------GLVP 301
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ EA+ + L K+ + V+ T + ++++ +A + VH ++
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
NG++ Y +C + DA VF + D+ + +MIT ++ GE A+ +F +
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
+ GL+PD + + +AC++L
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASL 518
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G AIE+L ++ + ++ T S +++AC A A + + +H + + +
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF M RDL + +I+G + G ++A+ +F +
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYE 394
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
++ GL + V + ++L
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASL 417
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 10/178 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T SQ + A+AL H H L S S N ++ YS+C A F +
Sbjct: 6 TISQQLTRYAAAQAL--LPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC--SALGDVVE 529
+ SW +++T ++ NGL A+ F + G+ ++ V + LG V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVH 123
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M D + ++ V M G G++D+A + E + W LM+
Sbjct: 124 AMAMATGFGSDVFVANAL------VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 241/408 (59%), Gaps = 21/408 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ KEA+ + ++ I D T ++ AC ALE + + ++++
Sbjct: 234 MIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDK-- 291
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ T+ N ++ MY +C +++ A S+F+ + +RD +W M+ G A NG GE+A+++
Sbjct: 292 NKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNM 351
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FSQ +A + PD+ ++GV SAC+ G V EG F SM+ +GI P++ HY +VD+LG
Sbjct: 352 FSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLG 411
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
G+L EA E I+ MPM+P+ VW L+ CR+H + E+ +R E + +L+P
Sbjct: 412 KAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVL 471
Query: 611 -----SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ N+ K ++ ++ KK +L+E+ VHE+ AGD SHP+T +
Sbjct: 472 QCNIYAACNKWDKLR----ELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKE 527
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY + + + +K AGY P T V DI +E KE A+ HSE+LA++ GL++S IR
Sbjct: 528 IYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIR 587
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLR+C DCH K++SK+ RE+I+RD RFHHF+ G CSC+DYW
Sbjct: 588 IVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ I+ + +D A F M ERD SW MI G+ + ++A+ +F + +
Sbjct: 197 VISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT 256
Query: 505 AGLKPDDQIFIGVFSACSALG 525
+ +KPD+ + V +AC+ LG
Sbjct: 257 SKIKPDEFTMVSVLTACAQLG 277
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 225/373 (60%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + AL + VH +VE++ N ++ +Y++C S++DA +F M
Sbjct: 221 TIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEM 280
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R + SW ++I G A NG G++A+++FS ++ L P + +GV ACS G V +G
Sbjct: 281 GLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDG 340
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F+ M +DYGI P ++H +VD+LG G ++EA ++I MP+EP+ VW L+ C
Sbjct: 341 FRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCA 400
Query: 591 MHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGL---VPVNASELAKEKENKKLAS 640
MH LELG E + +LDP N + G+ V V + K++ K
Sbjct: 401 MHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKN-PG 459
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+L+E+R+ V+E+ GD SHPE+++IY ++ + +++ GYIP T VL DI++E KE
Sbjct: 460 HSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKET 519
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
AL HSERLA++ LL S PIRI+KNLR+CGDCH A +ISK+ RE+I+RD RFH
Sbjct: 520 ALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFH 579
Query: 761 HFKDGLCSCRDYW 773
HF+ G CSC+DYW
Sbjct: 580 HFQGGACSCKDYW 592
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 3/180 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T+ L+QAC AL E + +H + V N ++ +Y C + A VF
Sbjct: 115 DTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVF 174
Query: 469 SNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
M R +L SW++M+ FA NG + + +F + PD + V +AC+ G
Sbjct: 175 DEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGA 234
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + G+V + +++D+ G +++A E+M + V W L+
Sbjct: 235 LALGR-RVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLI 293
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 237/406 (58%), Gaps = 15/406 (3%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+DG + G +A+ + LL + D T + AC ALE + +H V+
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L V G++ MYS+C S+++A VF++ +D+ +W+ MI G+A +G +DA+ +F
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 500 SQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
++ + GL+P D FIG AC+ G V EG+ FESM ++YGI P ++HY +V +LG
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L A E I+ M M+ D +W ++ C++HG+ LG AE + L+ N
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK--NSGIY 466
Query: 619 AGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + AS L KEK K + +E+ +KVHE+RAGD H ++ +IY
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++R + ++K GY+P T VL D+++ KE++L HSERLA+++GL+S+ +P++I
Sbjct: 527 TMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIF 586
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+ K+ISKI GR++++RD RFHHF DG CSC D+W
Sbjct: 587 KNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL- 507
++ Y++ +++ A ++F +M ERD+ SW+ MI G+A++G DA+ +F + G
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KPD+ + SACS +G + G K I ++K ++DM G L+EA+
Sbjct: 256 KPDEITVVAALSACSQIGALETGRW-IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV 314
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
P + D+ W ++ MHG
Sbjct: 315 LVFNDTPRK-DIVAWNAMIAGYAMHG 339
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 230/394 (58%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++ +++ L+++ I+ D T L++AC D +A+++H ++ R +
Sbjct: 301 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 360
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L +Y++ ++ + +F + +RD +W M+ G+A + G +A+ +F + G++
Sbjct: 361 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 420
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F + SACS G V EG +FE MS+ Y + P + HY +VD+LG +G L++A E
Sbjct: 421 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 480
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGL 621
I+ MPMEP VW L+ CR++GN+ELG AE + LDPS N S AGL
Sbjct: 481 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 540
Query: 622 V--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L KE+ + + +E +K+H + GD HP +D+I+ + L +++E
Sbjct: 541 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 600
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG P+T FVLHDID+E K + + HSE+LA++ GLL + + P+ I KNLR+CGDCHS
Sbjct: 601 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 660
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K S + R +IIRD+KRFHHF DGLCSCRDYW
Sbjct: 661 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC D AL+E K++H V +L + N ++ MY + +D A +F M
Sbjct: 223 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 282
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
R L SW++M+ NG E +D+F+ K+AG+ PD + + AC+ G
Sbjct: 283 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 336
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+ A ++ A+H V + L+ + ++ MY + +DA +F M +D
Sbjct: 125 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 184
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
L SW+++++G + G ++ F + + ++G +P++ + V SAC+ +G + EG
Sbjct: 185 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGK-SL 243
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ G+ K S+++M G G+LD A + E+MP+ V W ++ + +G
Sbjct: 244 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMVVIHNHNGY 302
Query: 595 LELG 598
E G
Sbjct: 303 AEKG 306
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 363 EDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD 422
ED F E + T L G +EAI++ L+ K+ + VD TF+ L+ AC
Sbjct: 377 EDIFEEIKDRDRIAWT-AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 435
Query: 423 AKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ +EE K E + + + P R+ Y+ ++ + ++DA+ + +M
Sbjct: 436 SGLVEEGKKYFEIMSEVYRVEP-RLDHYSCMVDLLGRSGRLEDAYELIKSM 485
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 222/371 (59%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ C A +LE K +H ++++ + + MY+ C +D A +F+
Sbjct: 431 TMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEA 490
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
T+RD++ W+ MI+GFA +G GE A+++F + + G+ P+D FIG ACS G + EG
Sbjct: 491 TDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGK 550
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F M ++G P ++HY +VD+LG G LDEA E I+ MPM P++ V+ + C++
Sbjct: 551 RLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKL 610
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA---------KEKENKKLASQN 642
H N++LG+ A+ L+P + + +A+ K++ K +
Sbjct: 611 HKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVS 670
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV +HE+ GD HP+ K+Y +I +R ++++AGY P+ VLH+ID+E K AL
Sbjct: 671 SIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSAL 730
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA+++GL+S+ PIRI+KNLRVC DCH+A K++SKI GRE+I+RD RFHHF
Sbjct: 731 NYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHF 790
Query: 763 KDGLCSCRDYW 773
K+G CSC DYW
Sbjct: 791 KEGSCSCCDYW 801
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L++ CG A ALE K +H R L + + MY +C + A SVF +
Sbjct: 330 TMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF 389
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+DL W MI+ +A+N ++A DIF G++P+++ + + C+ G + G
Sbjct: 390 KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGK 449
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ K GI M S VDM + G +D A + + D+ +W +++ M
Sbjct: 450 WIHSYIDKQ-GIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAM 507
Query: 592 HGNLELGDRCAEIVEQLD 609
HG+ G+ E+ E+++
Sbjct: 508 HGH---GEAALELFEEME 522
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 1/174 (0%)
Query: 358 NNCKHEDDFAEASRSSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
+NC + A S N L +K +A ++ + VD +
Sbjct: 71 SNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSV 130
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
++AC + + VH V + V N ++ MYSE S+ A +F + +D+
Sbjct: 131 LKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDV 190
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
SW TMI + ++GL ++A+D+ +KP + I + + L D+ G
Sbjct: 191 VSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLG 244
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 387 KEGKVKEAIEVL---GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLS 441
+ G + EA+++L ++ + + + + + ++ D L+ KA+H +V R
Sbjct: 202 RSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELAD---LKLGKAMHAYVMRNGKCG 258
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MY +C+++ A VF +++ + SW MI + + V +F +
Sbjct: 259 KSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVK 318
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+ P++ + + C G + G L + + G S+ + +DM G G
Sbjct: 319 MLGEGMFPNEITMLSLVKECGTAGALELGKL-LHAFTLRNGFTLSLVLATAFIDMYGKCG 377
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+ A + D+ +W +++
Sbjct: 378 DVRSARSVFDSFK-SKDLMMWSAMIS 402
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 227/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K +AIE+ LL+ + + + ++ +C ALE + H+++ R
Sbjct: 216 MISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNK 275
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY+ C S+D A VF + RD SW T+I GFA +G E A++ FS
Sbjct: 276 MTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFS 335
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++AGL P + F V SACS G V G+ FESM +DY I P ++HY +VD+LG
Sbjct: 336 RMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRA 395
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G L EA +F+ +MPM+P+ +W L+ CR+H N E+ +R + + +L P S
Sbjct: 396 GKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLS 455
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ ++ N ++ KE+ K L E+ KVH++ GD +HPE +I +
Sbjct: 456 NIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWE 515
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++ AGY L DID+E KE + HSE+LA+++ ++ + PIRI+KNLR
Sbjct: 516 EILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLR 575
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A K+ISK+ RELI+RD RFHHFK G CSC DYW
Sbjct: 576 VCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 435 HVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
+V R +S L V ++ ++ Y + + A +F M E++L +W MI+G+AKN +
Sbjct: 169 YVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDK 228
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--- 551
A++++ + G+ ++ + + V ++C+ L G L + DY + M +
Sbjct: 229 AIELYFLLQSEGVHANETVMVSVIASCAHL-----GALELGERAHDYILRNKMTVNLILG 283
Query: 552 -SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
++VDM G +D+A+ +++P D W L+ MHG E + E +++
Sbjct: 284 TALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTLIAGFAMHGYAE---KALEYFSRME- 338
Query: 611 SRLNEKSKAGLVP 623
KAGL P
Sbjct: 339 -------KAGLTP 344
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 226/400 (56%), Gaps = 11/400 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G+ EA+++ +++ I D T Q + AC + +LEE H
Sbjct: 342 GYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIH 401
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
++ N ++ +Y +C +DD+ +F+ M RD SW M++ +A+ G +A+ +F +
Sbjct: 402 YITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMV 461
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
Q GLKPD GV SACS G V +G +FE M +YGIVPS HY ++D+ +G +
Sbjct: 462 QLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRI 521
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------SRL 613
+EA+ FI MP PD W L++ CR GNLE+G AE + +LDP S
Sbjct: 522 EEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 581
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
K K V KEK +K Q+ ++ + K+H + A D S P +D+IYA + L
Sbjct: 582 ASKGKWDCVA-QLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEEL 640
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++ + GY P+T FV HD+++ K + L HSERLA++ GL+ P+ PIR+ KNLRVC
Sbjct: 641 YQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVC 700
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A K IS + GRE+++RDA RFH FKDG CSC D+W
Sbjct: 701 VDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G KEAIE ++ + + +D F ++ ACG A+ + + +H + R
Sbjct: 238 MIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN 297
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY +C + A +VF M ++++ SW M+ G+ + G +AV IF
Sbjct: 298 LQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFL 357
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDM 556
+++G+ PD SAC+ + + EG S I + HY+ S+V +
Sbjct: 358 DMQRSGIDPDHYTLGQAISACANISSLEEG-----SQFHGKAITAGLIHYITVSNSLVTL 412
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSR 612
G G +D++ +M + +V W +++ G ++L D+ ++ + D
Sbjct: 413 YGKCGDIDDSTRLFNEMNVRDEVS-WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVT 471
Query: 613 L----NEKSKAGLV 622
L + S+AGLV
Sbjct: 472 LTGVISACSRAGLV 485
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
YN ++ C ++DA +F M E+D SW MI G A+NG+ ++A++ F + K GL
Sbjct: 205 YNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGL 263
Query: 508 KPDDQIFIGVFSACSALGDVVEG 530
K D F V AC LG + +G
Sbjct: 264 KMDQYPFGSVLPACGGLGAINDG 286
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 231/401 (57%), Gaps = 11/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G AIE+ ++ S + T + +++AC LE + VH HV +
Sbjct: 252 IAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYER 311
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + +N +L MY +C S++DA ++F M +RD+ SW TMI+G A+NG +A+ +F
Sbjct: 312 DLIL--HNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDL 369
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G+ P+ +GV ACS G V +G +F SM K +GI P +H+ +VD+LG G
Sbjct: 370 MKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAG 429
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-----RLNEK 616
LDEA+EFI M +EPD +W L+ CRMH + L A + +L+P L
Sbjct: 430 KLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSN 489
Query: 617 SKAGLVPVNASELA----KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A L +E + +++ KK ++ +E+ VH + AGD SHP +D I +
Sbjct: 490 TYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNR 549
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++ GY+P+T FVL D+ E KE+ L HSE++A++ G + + PIRIMKNLR+
Sbjct: 550 LIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRI 609
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ K++SK GR +IIRD RFHHF+DG CSC DYW
Sbjct: 610 CGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+G+ +EA+ L + + ++ + TFS ++ ACG L A+H ++ V
Sbjct: 160 DGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFV 216
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ ++ Y + +D VF M RDL W+++I GFA++G G A+++F + K AG
Sbjct: 217 RSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGF 276
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYL 563
+ V AC+ GM+ E+ + + V + + +++DM G L
Sbjct: 277 SANQGTLTSVLRACT-------GMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSL 329
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
++A +MP + DV W +++
Sbjct: 330 EDAEALFHRMP-QRDVISWSTMIS 352
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG-----------ILKMYSE 457
D + ++L++ C + + +H HVE + ++S Y+G ++ MY++
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVE---AHGQLSHYSGGAGGGIFVSNSLVSMYAK 127
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+DDA +F M ER++ +W T++ A +G E+A+ + G+ P+ F
Sbjct: 128 FGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSS 187
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V AC G V LH ++ G+ + S++D G LD ++M +
Sbjct: 188 VLGACGTPG--VLAALHASTVK--VGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEM-VT 242
Query: 577 PDVDVWEKLM 586
D+ VW ++
Sbjct: 243 RDLVVWNSII 252
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 241/403 (59%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ G +A+ + + ++ +S+ P S ++ AC ++ E K VH V L
Sbjct: 215 ISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLG 274
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C + A +F M +D+ SW ++I G A++GL E+A+ ++
Sbjct: 275 YESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYD 334
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
AG+KP++ F+G+ ACS +G V +G F+SM +D+GI PS++HY ++D+ +
Sbjct: 335 DMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRS 394
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL---DPSRL---- 613
G+LDEA I MP++PD W L++ C+ HGN ++ R A+ + L DPS
Sbjct: 395 GHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLS 454
Query: 614 NEKSKAGLVPVNAS---ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + AG+ N S +L KE KK+ + +++ + + AG+ S P D+I L+
Sbjct: 455 NIYAGAGMWE-NVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLM 513
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++M+ GY+P+T VL D+DQ+ KE L HSERLA+++GLL + IRI+KNL
Sbjct: 514 TKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNL 573
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH+ LK+IS I RE+ +RD KR+HHFKDG CSC D+W
Sbjct: 574 RVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y +C + DA +F + ++D +W T+++ + L A I GL+PD
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPD 108
Query: 511 DQIFIGVFSACSALGDV 527
+F + AC+ LG V
Sbjct: 109 HFVFSSLIKACANLGSV 125
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 378 TLEQLDGLVKEGKVKEAIEV----LGLLEKQCISVDLP-----------TFSQLMQACGD 422
L+ D L ++ V A + L L + S+ LP FS L++AC +
Sbjct: 62 ALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACAN 121
Query: 423 AKALEEAKAVHEHVERLLSPLRVS--TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
++ H LLSP + ++ MY++ + D +VF ++ E SW
Sbjct: 122 LGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWT 181
Query: 481 TMITGFAKNGLGEDAVDIF--SQFK 503
MI+G+A++G +A+++F S FK
Sbjct: 182 AMISGYARSGRKLEALELFRESPFK 206
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 233/395 (58%), Gaps = 17/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+++ G + +++D +FS + A + LEE + +H V +L + N
Sbjct: 1334 EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAA 1393
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C M D + R SW+ +I+ FA++G + A + F + + G KPD
Sbjct: 1394 MDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDH 1453
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ + SAC+ G V EG+ +++SM++++G+ P ++H V I+D+LG +G L A FI+
Sbjct: 1454 VTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIK 1513
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK 631
+MP+ P+ W L+ CR+HGNLEL + AE + +LDPS A ++ N +
Sbjct: 1514 EMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPS----DDSAYVLYSNVCATSG 1569
Query: 632 EKEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+ E+ K++ S N+ ++++ KVH + G+ HP+ +I A + L K
Sbjct: 1570 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 1629
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGY+P+T F LHD+D+E KE L HSERLA++ GL+++P + +RI KNLRVCGDCHS
Sbjct: 1630 EAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHS 1689
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +S IVGR++++RD RFHHF G CSC DYW
Sbjct: 1690 VYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A+++ + + I +D ++ C + + +H + V+ N ++
Sbjct: 317 DALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALI 376
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++ ++DA F M E+++ SW ++I+G+AK+G G AV ++ + + G KP+D
Sbjct: 377 DMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDV 436
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + ACS G EG F +M Y I P +HY +VD+ G L+EA + K
Sbjct: 437 TFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCK 496
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
+ ++ + +W ++ ++G + LG A + + P
Sbjct: 497 IDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP 534
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L+ + +H V +L V N +L +YSE +DA VF MTERDL SW++M+
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG----MLHFESMSKDY 541
+ ++G D + I ++ Q G + F +ACS ++E L + D+
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
IV + ++V M G G + EA + ++ MP +PD W L+
Sbjct: 1184 LIVGN-----ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 1222
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
KA+H L + N ++ MYS+ +++ A VF M R+ SW TM++G+ +
Sbjct: 764 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRV 823
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
GL E+AV +F Q G++P+ + + +ACS G + + GI+ +
Sbjct: 824 GLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYV 883
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++V GS G + A + E+MP + +V W LM
Sbjct: 884 GTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILK 453
E L LL +D + +++Q C D KA ++ +H H+ S L ++T ++
Sbjct: 16 EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT--KLII 73
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
Y + + A +VF M ER + SW M++G+++NG E A +FS + G+K +
Sbjct: 74 FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFT 133
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ AC++L + G + + + V ++ ++VD G +++A M
Sbjct: 134 YGSALRACTSLRCLDMG-IQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192
Query: 574 PMEPDVDVWEKLM 586
ME DV W ++
Sbjct: 193 -MERDVVSWNAMI 204
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAK-ALEEAKAVHEHVERLLSPLRVSTY--N 449
EA++ L+ ++ I + T ++ AC L+ +H H+ +L+ Y N
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHI--VLTGFESDDYVKN 1290
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C ++ + +F + + +W+ M+ A +G GE+A+ IF + + G+
Sbjct: 1291 SLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNL 1350
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F G +A + L + EG + G + + +DM G G + + L+
Sbjct: 1351 DQFSFSGGLAATANLAVLEEGQ-QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 1409
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHG 593
+ + P+ W L++ HG
Sbjct: 1410 LPQ-PINRSRLSWNILISAFARHG 1432
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--R 438
+ G + G+ ++A + + + + T+ ++AC + L+ V ++ R
Sbjct: 102 MVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGR 161
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ L V + ++ +S+C M+DA +F M ERD+ SW+ MI G+A G +D+ +
Sbjct: 162 FVENLFVKS--ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCM 219
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F + GL PD C LG V+
Sbjct: 220 FRSMLRGGLVPD----------CYTLGSVLRA 241
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V++GK + +++L L + ++ TF+ + AC + + L E+K VH + +
Sbjct: 1125 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 1184
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY + M +A V M + D +W+ +I G A+N +AV + ++
Sbjct: 1185 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 1244
Query: 506 GLKPDDQIFIGVFSACSALGDVVE 529
G+ + + V ACSA D+++
Sbjct: 1245 GIPANYITMVSVLGACSAPDDLLK 1268
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G G E + V + ++ +S + TF+ + +CG + V H+ +
Sbjct: 921 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 980
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS N ++ M+S S+++A VF +M E D+ SW+ MI+ +A +GL +++ F +
Sbjct: 981 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040
Query: 504 Q 504
Sbjct: 1041 H 1041
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 237/410 (57%), Gaps = 9/410 (2%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
S++ T + G + E++ + + ++ + D ++ AC A+ A+
Sbjct: 164 SKDLVTWTVMIGAYADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFA 223
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
++++ R L V ++ MY++C S++ A VF M E+++ SW MI + +G G
Sbjct: 224 NDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRG 283
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+DA+D+F + P+ F+ + ACS G + EG+ F SM +++ + P +KHY
Sbjct: 284 KDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
+VD+LG G LDEAL IE M +E D +W L+ CR+H +EL ++ A + +L P
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN 403
Query: 613 -------LNEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPET 663
N +KAG A ++ +++ KK+ +EV +K +++ GD SHP++
Sbjct: 404 PGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQS 463
Query: 664 DKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAP 723
+IY ++ L +++ AGY+P+T FVL D+++E K+E L HSE+LA++ GL++ P P
Sbjct: 464 KEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEP 523
Query: 724 IRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IRI KNLRVCGDCH+ K++S I+ R +I+RDA RFHHF DG CSC DYW
Sbjct: 524 IRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+ VH HV + + N +L Y++ ++DDA+S+F +T RD +W M+ GFAK
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G F + + G+ PD+ V C D+ G + + + K +G++ H
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLK-HGLLSD--H 136
Query: 550 YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL---CRMHGNLELGDRCAE 603
+V S+VDM +++A E+M + D+ W ++ C + +L L DR E
Sbjct: 137 FVCASLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMIGAYADCNAYESLVLFDRMRE 194
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 239/406 (58%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVER 438
L G + G +EA+++ +++ + D T ++ +C + +LEE H V
Sbjct: 342 MLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 401
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S + VS N ++ +Y +C S +++ +F+ M RD SW ++ G+A+ G + + +
Sbjct: 402 LISFITVS--NALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGL 459
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + GLKPD FIGV SACS G V +G+ +FESM K++GI+P + H I+D+LG
Sbjct: 460 FERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLG 519
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L+EA FI MP PDV W L++ CR+HG++E+G A+ + L+P N S
Sbjct: 520 RAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQ--NPASY 577
Query: 619 AGLVPVNASE-----LA------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + AS+ +A ++K +K + ++ + KVH + A D S P +IY
Sbjct: 578 VLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIY 637
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + L +M E GY+P+ VLHD+++ K + L HSE+LA++ GL+ P PIR++
Sbjct: 638 AELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVI 697
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A K ISKI RE+++RDA RFH FKDG CSC D+W
Sbjct: 698 KNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL++ G +EA+++ + ++D TF ++ ACG AL E K +H +V R
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C S+ A +VF M ++++ SW M+ G+ +NG E+AV IF
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFF 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ G++PDD V S+C+ L + EG F + G++ + +++ + G
Sbjct: 361 EMQRNGVEPDDFTLGSVISSCANLASLEEGA-QFHCRALVSGLISFITVSNALITLYGKC 419
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + + +M + +V W L+
Sbjct: 420 GSTENSHRLFTEMNIRDEVS-WTALL 444
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ C ++++ +F + ERD SW MITG +NGL +A+D+F + +
Sbjct: 204 VVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRL 263
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLH---FESMSKDYGIVPSMKHYVSIVDMLGST 560
AG D F V +AC +L + EG +H + KD V S ++VDM
Sbjct: 264 AGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS-----ALVDMYSKC 318
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
+ A ++MP + +V W ++
Sbjct: 319 RSIKSAETVFKRMP-QKNVISWTAML 343
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS-QFKQA 505
++N IL +YS+ + +F+ M RD SW+ I+G+A G DAV ++ K A
Sbjct: 73 SWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDA 132
Query: 506 GLKPDDQIFIGVFSACSA-----LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + F + CS LG + G +L F S + P +VDM
Sbjct: 133 AMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP-------LVDMYTK 185
Query: 560 TGYLDEALEFIEKMP 574
G + +A + ++MP
Sbjct: 186 LGLIYDAKRYFDEMP 200
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 227/403 (56%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L+G G+ E + V + + + D T ++ AC + L + VH V ++
Sbjct: 197 LNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGL 256
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ +Y++C +DDA +F M R + SW ++I G A NG G DA+ +FS
Sbjct: 257 VGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFS 316
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ L P + +GV ACS G V +G +F+ M +YGI P ++H +VD+LG
Sbjct: 317 MMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRA 376
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-----LNE 615
G ++EA +I MP+EP+ VW L+ C MH LE+G+ + +LDP L
Sbjct: 377 GRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLS 436
Query: 616 KSKAGL-----VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
AG+ V V + K +L+E+R+ V+E+ GD SHPETD+IY ++
Sbjct: 437 NLYAGVGRWADVHVLRKTMVTHGVRKN-PGHSLVELRNSVYEFVMGDRSHPETDQIYEML 495
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +++ GYIP T VL DI+ E KE AL HSERLA++ LL S PIRI+KNL
Sbjct: 496 GDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNL 555
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH A+K+ISK+ RE+I+RD RFHHFK G CSC+DYW
Sbjct: 556 RVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMY 455
L L + D T+ L+QAC AL + +H + L+S V N ++ +Y
Sbjct: 110 LALHRRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVS--LVFVKNSLVHLY 167
Query: 456 SECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
C + A VF + ER+L SW++++ GFA NG + + +F + + PD
Sbjct: 168 GACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFT 227
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ V +AC+ +G + G G+V + +++D+ G +D+A + +M
Sbjct: 228 VVSVLTACAEIGVLALGR-RVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEM 286
Query: 574 PMEPDVDVWEKLM 586
+ V W L+
Sbjct: 287 GVGRTVVSWTSLI 299
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 233/401 (58%), Gaps = 13/401 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G +EA+ V ++ + T+S +++AC ++ A +H +E+
Sbjct: 439 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 498
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ Y++C + DA VF ++ ERD+ SW+ +I+G+A +G DA+++F +
Sbjct: 499 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 558
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
++ ++ +D F+ + S CS+ G V G+ F+SM D+GI PSM+HY IV +LG G L
Sbjct: 559 KSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 618
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
++AL+FI +P P VW L++ C +H N+ LG AE + +++P +E + L
Sbjct: 619 NDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQ--DETTYVLLSN 676
Query: 624 VNASE--------LAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A+ L K N +K+ + +E++ ++H + G HP+ I A++
Sbjct: 677 MYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEW 736
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + GYIP+ VLHD+D+E K L HSERLA+++GL+ +P PIRI+KNLR
Sbjct: 737 LNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRS 796
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A +ISKIV RE+I+RD RFHHF+DG CSC DYW
Sbjct: 797 CLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A E+ L + + + + S ++QAC + L+ K +H H ++ + N +
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C+ MD + +FS++ + + SW+T++ GF+++GLGE+A+ +F + + A +
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465
Query: 512 QIFIGVFSACSALGDVVE-GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ V AC++ + G +H + + + S++D GY+ +AL+
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVF 523
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGN----LELGDR 600
+ + ME D+ W +++ +HG LEL DR
Sbjct: 524 QHL-MERDIISWNAIISGYALHGQAADALELFDR 556
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+G++ YS C + DA VF+ + +D W M++ +++N E+A +FS+ + +G K
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCK 260
Query: 509 PDDQIFIGVFSACSALGDVVEG 530
P+ V A L VV G
Sbjct: 261 PNPFALTSVLKAAVCLPSVVLG 282
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 408 VDLPTFSQLMQAC---GDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMD 462
VD ++ +Q C GDA+ +AVH HV R + L + N +L MY + +
Sbjct: 57 VDSFACARQLQGCIARGDARG---GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLA 113
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
A +F M ER++ S+ T++ A+ G E A +F + + G
Sbjct: 114 SARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG 157
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 231/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ +EA V ++ + D T L+ AC AL+ + H V
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 472
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N ++ MY++C +D + VF+ M RD+ SW+TMI G+ +GLG++A +F +
Sbjct: 473 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 532
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G PD FI + SACS G V+EG F M YG+ P M+HY+ +VD+L G
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 592
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+LDEA EFI+ MP+ DV VW L+ CR++ N++LG + + ++++L P N
Sbjct: 593 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 652
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG + K + KK + +E+ +H + GD SHP++ +IY +
Sbjct: 653 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 712
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K+ GY P+T FVL D+++E KE+AL+ HSE+LA+++G+LS I + KNLRV
Sbjct: 713 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 772
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +K IS + R +I+RDA RFHHFK+G CSC D+W
Sbjct: 773 CGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V ++ +A + + Q + PT + ++AC L + +H + +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ N +L MY++ +D A ++F M +D S+ +++G+ +NG E+A +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD + + ACS L + G S+ G+ +++DM
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 489
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + MP D+ W ++ +HG
Sbjct: 490 GRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF ++AC +A+H H L + L VST +L MY +C + DA +F+
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVST--ALLDMYVKCACLPDAAHIFA 184
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVD--IFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M RDL +W+ M+ G+A +G+ AV + Q + L+P+ + + + G +
Sbjct: 185 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 244
Query: 528 VEGM----------LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
+G LH SK + + +++DM G L A + MP
Sbjct: 245 AQGTSVHAYCIRACLHPNRNSKS-KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303
Query: 578 DVDVWEKLM 586
+V W L+
Sbjct: 304 EV-TWSALI 311
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 12/179 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLR---------VSTYNGILKMYSECDSM 461
T L+ AL + +VH + R L P R V +L MY++C S+
Sbjct: 230 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 289
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSA 520
A VF M R+ +W +I GF A +F GL I A
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 349
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C++L + G ++ G+ + S++ M G +D+A+ ++M ++ V
Sbjct: 350 CASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 407
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 231/371 (62%), Gaps = 10/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + AC + +LE+ K VH HV + N ++ MY++ S+ DA VF +
Sbjct: 309 TYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 368
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ SW+++I+G+A++GLG +A+ +F Q +A ++P++ F+ V +ACS G + EG
Sbjct: 369 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 428
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+FE M K + I + H+V++VD+LG G L+EA +FIE+MP++P VW L+ CRM
Sbjct: 429 YYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRM 487
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAKEKENKKLASQN 642
H N++LG AE + +LDP N + AG + ++ KE KK + +
Sbjct: 488 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 547
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ ++VH + A D SHP ++I + + ++KE GY+P+T VL ++Q+ +E L
Sbjct: 548 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 607
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ +L +P IRI KN+R+CGDCHSA K S+++GRE+I+RD RFHHF
Sbjct: 608 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 667
Query: 763 KDGLCSCRDYW 773
G+CSCRDYW
Sbjct: 668 LHGMCSCRDYW 678
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA+ + + + T S L++A G + + +H +
Sbjct: 178 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 237
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ V + +L MY+ M +A +F+++ +++ SW+ +I G A+ G GE + +F Q
Sbjct: 238 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 297
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G +P + VF+AC++ G + +G + K G P +++DM +G
Sbjct: 298 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSG 356
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
+ +A + ++ ++ D+ W +++ HG LG ++ EQ+ +++
Sbjct: 357 SIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG---LGAEALQLFEQMLKAKV 404
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ VL L+ + + +S+++ C + L++ +A+H H++ + N IL M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y++C S+++A +F M +D+ SW +I+G++++G +A+ +F + G +P++
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ A S G + S YG ++ S++DM ++ EA
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 260
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 218/377 (57%), Gaps = 25/377 (6%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+V LPT Q + A E K + N ++ MYS C +DDA
Sbjct: 462 TVGLPTKGQQLHALSIKTGFESDKGIS---------------NSLVSMYSRCGYLDDACR 506
Query: 467 VFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
F M + ++ SW ++I+ AK+G E A+ +F +G+KP+D +I V SACS +G
Sbjct: 507 AFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG 566
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V EG +F SM KD+ ++P M+HY +VD+L +G + EALEFI +MP + D VW+ L
Sbjct: 567 LVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTL 626
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAKEKENK 636
+ CR + N+E+G+ A V L+P N + GL L + +
Sbjct: 627 LGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLS 686
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + + V + +HE+RAGDTSHP +IYA + L ++K+ GY+P+T VLHD+ +
Sbjct: 687 KETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDK 746
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE+ LL HSE++AV+ GL+++ PIRI KNLRVC DCHSA+K ISK GRE+I+RD+
Sbjct: 747 LKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDS 806
Query: 757 KRFHHFKDGLCSCRDYW 773
RFH KDG CSC +YW
Sbjct: 807 NRFHRMKDGKCSCGEYW 823
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ A+E+L + + I + T+S L++AC + + + +H V +
Sbjct: 333 GQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVG 392
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY+E M++A F + ER+L S + I G SQ + +
Sbjct: 393 NALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI-----GETGRSNASWSSQIESMDVG 447
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
F + SA + +G +G ++S G S+V M GYLD+A
Sbjct: 448 VSTFTFASLLSAAATVGLPTKGQ-QLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACR 506
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++M + +V W +++ HG+ E
Sbjct: 507 AFDEMEDDHNVISWTSIISALAKHGHAE 534
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS ++ M++ + A VF+ + ER + W MIT + + G AV++F +
Sbjct: 183 VSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLE 242
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTG 561
G +PD + SAC+ G G S+ G+V +VDM L
Sbjct: 243 DGFEPDGYTMSSMVSACAEQGSAGLGQ-QLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN---LCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
++ A + ++MP +V W L++ C N + C + E ++P+ L S
Sbjct: 302 SMECARKVFKRMPTH-NVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N +L MYS+C + A VF M RDL SW M +NG ++A+ + + ++GL
Sbjct: 83 NSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGL 142
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY-------VSIVDMLGST 560
+P+ F+ C+A G L S G + +++DM
Sbjct: 143 RPN------AFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARN 196
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L A + + +E V VW ++
Sbjct: 197 GDLVAARKVFNGL-VERTVVVWTLMIT 222
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 219/376 (58%), Gaps = 11/376 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF +++AC L E KA+H + V N ++ MY+ C S+++A +F
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLF 502
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+ + SW M+ F++ G +A+D+F + G+KPDD + + C+ G +
Sbjct: 503 AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLE 562
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G +F M++ + + P+ H+ ++VD+LG +G L +A E +E MP EPD W +
Sbjct: 563 QGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTA 622
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASELAKEKEN--KKLA 639
CR+HG LELG+ AE V +LDPS N + G+ AS K +E KKL
Sbjct: 623 CRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLP 682
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +EV K+HE+ +G HP TD+I + L M+ AGY+P+T+ VLHD+ + KE
Sbjct: 683 GLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKE 742
Query: 700 EALLAHSERLAVSHGLLSSPARA-PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
LL HSE++A++ GL+SS PIR++KNLRVC DCH+A K I++I GR++I+RD R
Sbjct: 743 TMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNR 802
Query: 759 FHHF-KDGLCSCRDYW 773
FH F DG CSC DYW
Sbjct: 803 FHRFSSDGKCSCGDYW 818
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLR 444
V G EA+E+ L+ + TF ++ AC KAL + + VH H+ ER L
Sbjct: 284 VLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS-E 342
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ ++ MY++C S+++A VF+ M RD +W T+I +A NG G+DA F +
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G + D + + + G V M F M+ G+ P ++++++ S G L
Sbjct: 403 LGSR-DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 565 EALEF---IEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
E I + +E +V V L+N+ G+LE +R
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAER 500
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ +C + E +A+HE + N ++ MY +CDS+ DA SVF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 469 SNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+M +R++ SW+ MI +A+NG +A+ ++ + GL D F+ V ACS+L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T+ ++ + L E + +H + + L V+T ++ MY +C S +A VF
Sbjct: 209 TYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT--ALINMYGKCGSSHEAREVFD 266
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +RD+ SW+ MI + NG +A++++ + G K F+ + ACS++ + +
Sbjct: 267 KMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L S + G+ + ++V+M G L+EA + M D W L+
Sbjct: 327 GRL-VHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLI 381
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV--S 446
G EA+ + + Q + D TF ++ AC +L + + +H V S L S
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRV--FYSGLDSFQS 143
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY+ S+ DA +F ++ RD TSW+ +I +++G A+ IF + K
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CD 202
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+KP+ +I V S S + EG +H E ++ G + ++++M G G E
Sbjct: 203 VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN--GFDTDLVVATALINMYGKCGSSHE 260
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV- 624
A E +KM + D+ W ++ ++G+ E+ ++LD +++KA V +
Sbjct: 261 AREVFDKMK-KRDMVSWNVMIGCYVLNGDFH---EALELYQKLDMEGF-KRTKATFVSIL 315
Query: 625 NASELAKEKENKKLASQNLLE 645
A K +L ++LE
Sbjct: 316 GACSSVKALAQGRLVHSHILE 336
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 240/404 (59%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G GK EA+ + + + + D T L+ AC + L + H ++ ++
Sbjct: 79 INGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVKVGL 138
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N +L +Y++C ++ +A +F M ER++ SW ++I G A NG G++A++ F
Sbjct: 139 NKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEALEHFK 198
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ GL P + F+GV ACS G V EG +F+ M + Y IVP ++HY +VD+LG
Sbjct: 199 DMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRA 258
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS--------- 611
G L EA ++I+ MP++P+ +W L+ C +HG+L LG + QL+P
Sbjct: 259 GLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLS 318
Query: 612 --RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+E+ + + V + L++ +K +L+E+ + VHE+ GD +HP+++ IY +
Sbjct: 319 NLYASEQRWSDVHEVRRTMLSEGV--RKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKM 376
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + ++K AGY+P T VL DI++E KE AL HSE++A++ L+++ PIRI+KN
Sbjct: 377 LVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKN 436
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A+K+ISK+ R++++RD RFHHF+DG CSCRDYW
Sbjct: 437 LRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSCRDYW 480
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ A+ VF M E+D+ +W+++I GFA NG +A+ ++ + G++PD + + SAC
Sbjct: 58 ESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSAC 117
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+ L +V G M K G+ ++ +++D+ G + EA + ++M +E +V
Sbjct: 118 AELATLVLGRRAHVYMVK-VGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVS 176
Query: 582 WEKLM 586
W L+
Sbjct: 177 WTSLI 181
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 244/421 (57%), Gaps = 17/421 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ +E S +S N + G + G ++AI + ++K + + T + ++ AC
Sbjct: 367 DESSEKSLASWN----AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQL 422
Query: 424 KALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL K VH+ + R S + VST ++ MY++C S+ +A +FS M E++ +W+
Sbjct: 423 GALSLGKWVHDLINRESFESNIFVST--ALIDMYAKCGSITEAQRLFSMMPEKNAVTWNA 480
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +G G +A+++F++ + + P F+ V ACS G V EG F SM D+
Sbjct: 481 MISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDH 540
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G P +HY +VD+LG G LD+AL+FI KMP+EP VW L+ C +H + L
Sbjct: 541 GFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLA 600
Query: 602 AEIVEQLDPSRL-------NEKSKAGLVPVNASE--LAKEKENKKLASQNLLEVRSKVHE 652
++ + +LDP + N S P AS + K ++ K L+EV + +H
Sbjct: 601 SDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHI 660
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ +GD SHP+ IYA++ L +M+EAG+ ET LHD+++E KE + HSE+LA++
Sbjct: 661 FTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIA 720
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GL++S IRI+KNLRVC DCH+A K ISKI R +++RDA RFHHFKDG+CSC DY
Sbjct: 721 FGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDY 780
Query: 773 W 773
W
Sbjct: 781 W 781
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L + +H + S + +YS + ++ A +F +E+ L SW+ MI+G
Sbjct: 324 LHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKD 540
+A+NGL E A+ +F + ++ ++P+ + SAC+ LG + V +++ ES +
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ +++DM G + EA MP E + W +++ +HG
Sbjct: 444 IFV------STALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHG 489
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ I+ Y + + A VF M ERD W+TM++G KN ++A+ IF + G+
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204
Query: 509 PDDQIFIGVFSACSALGDVVEGM 531
D V + L D+ GM
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGM 227
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLVK EAI + G + K I D T + ++ + + L + ++
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
G+ +YS+C ++ A +F + + DL S++ MI+G+ N E +V +F
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297
Query: 501 QFKQAGLKPDDQIFIGVF 518
+ +G K + +G+
Sbjct: 298 ELLVSGEKVNSSSIVGLI 315
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 239/404 (59%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ +EA+ V L++ + + V+ ++ AC AL++ + H ++ER
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ +Y++C M+ A VF M E+++ +W + + G A NG GE +++FS
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
KQ G+ P+ F+ V CS +G V EG HF+SM ++GI P ++HY +VD+
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARA 390
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L++A+ I++MPM+P VW L++ RM+ NLELG ++ + +L+ + N +
Sbjct: 391 GRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETA--NHGAYVL 448
Query: 621 LVPV--------NASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + N S + + ++K + Q +++EV +VHE+ GD SHP+ +I A+
Sbjct: 449 LSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAV 508
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ AGY +T V+ DID+E KE+AL HSE+ A++ G++S PIRI+KN
Sbjct: 509 WKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKN 568
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH +ISKI RE+I+RD RFHHFKDG CSC +W
Sbjct: 569 LRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
+ C + A +F M ERD +W+ MI+G+A+ G +A+++F + G+K + I
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V SAC+ LG + +G + ++ I +++ ++VD+ G +++A+E M
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERN-KIKITVRLATTLVDLYAKCGDMEKAMEVFWGME- 302
Query: 576 EPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
E +V W +N M+G G++C E+
Sbjct: 303 EKNVYTWSSALNGLAMNG---FGEKCLEL 328
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 220/373 (58%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T S ++ AC AL K +H +V R P N ++ MYS+C +D A +VF
Sbjct: 514 TISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFD 573
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+M +R+ SW +M++G+ +G G++A+DIF + ++AG PDD F+ + ACS G V +
Sbjct: 574 SMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQ 633
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ +F+ M +DY +V S +HY ++D+L G LD+A + I++MPMEP +W L++ C
Sbjct: 634 GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS---------ELAKEKENKKLAS 640
R+H N+EL + + + + + NA +L K+ KK
Sbjct: 694 RVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPG 753
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ ++ + + GD SHP + +IY+L+ L ++K GY+PET F LHD+D E K
Sbjct: 754 CSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNN 813
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+I+RD+ RFH
Sbjct: 814 LLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFH 873
Query: 761 HFKDGLCSCRDYW 773
HFK+G CSC YW
Sbjct: 874 HFKNGSCSCGGYW 886
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR-----------VSTYNGILKMYSECD 459
T L+ AC AL + +H + +++ L L + YN ++ MYS+C
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456
Query: 460 SMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFI 515
S A S+F ++ ER++ +W MI G+A+ G DA+ IFS+ K + P+
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKM 573
+ AC+ L + G +++ + PS+ ++V+ ++DM G +D A + M
Sbjct: 517 CILMACAHLAALRMGKQIHAYVTRHHEYEPSV-YFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 574 PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
P +V W +M+ MHG G +I +++ KAG VP + S L
Sbjct: 576 PKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKMQ--------KAGFVPDDISFLV 620
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 36/167 (21%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ AC KAL + K +H + R + N ++ Y++C SM+DA VF
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317
Query: 469 SNMTERDLTSWDTMIT-----------------------------------GFAKNGLGE 493
+ M +D+ SW+ M+T G+A+ G +
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQ 377
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSK 539
+A+D F Q G +P+ I + SAC++LG + +GM +H S+ K
Sbjct: 378 EALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKK 424
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+KEG + AI V + + D T ++ACG+ + +A+H + V
Sbjct: 125 IKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNV 184
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MYS C S++DA VF +T + D+ SW++++ K A+++FS+
Sbjct: 185 FVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM 244
Query: 503 ------KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
K + D + + AC++L + + S + G +++D
Sbjct: 245 SMIVHEKATNERSDIISIVNILPACASL-KALPQIKEIHSYAIRNGTFADAFVCNALIDT 303
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +++A++ M + DV W ++
Sbjct: 304 YAKCGSMNDAVKVFNVMEFK-DVVSWNAMVT 333
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 25/152 (16%)
Query: 395 IEVLGLLEKQCISVDL-PT-FSQLMQACGDAKALEEAKAVHEHVERL------------- 439
++ L + C D+ PT F+ L++ C +++ + +H+ +
Sbjct: 14 VQFLSVASADCFGRDVSPTHFASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSVP 70
Query: 440 LSPLRVSTY-------NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
L+PL +Y G++ Y C + DA SV +T W+ ++ K G
Sbjct: 71 LAPLPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHL 130
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ A+ + + +AG KPD AC L
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGEL 162
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 225/376 (59%), Gaps = 17/376 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVF 468
T S ++ AC +L K +H +V R S Y N ++ MYS+C +D A +VF
Sbjct: 514 TISCILMACAHLSSLRMGKQIHAYVTRH-HEYESSVYFVANCLIDMYSKCGDVDTARNVF 572
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+M +R+ SW +M++G+ +G G++A+DIF + ++AG PDD F+ + ACS G V
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ +F+ M DYG++ S +HY ++D+L +G LD+A + I++MPMEP +W L++
Sbjct: 633 QGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSA 692
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
CR+H N+EL + + + N+ S + + A+ +L K+ KK
Sbjct: 693 CRVHSNVELAEYALNKLVSMKAE--NDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ ++ + + GD SHP + +IY+L+ L ++K GY+PET F LHD+D E
Sbjct: 751 RPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEE 810
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
K L HSE+LA+++GLL++ PIRI KNLRVCGDCHSA ISKIV E+I+RD+
Sbjct: 811 KNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSS 870
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFK+G CSC YW
Sbjct: 871 RFHHFKNGSCSCGGYW 886
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 36/167 (21%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ AC KAL + K +H + R + N ++ Y++C SM DA +VF
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317
Query: 469 SNMTERDLTSWDTMIT-----------------------------------GFAKNGLGE 493
+ M +D+ SW+ M+T G+A+ G G+
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQ 377
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSK 539
+A+D F Q G +P+ I + SAC++LG + +GM H S+ K
Sbjct: 378 EALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKK 424
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLR-----------VSTYNGILKMYSECD 459
T L+ AC AL + H + +++ L L + +N ++ MYS+C
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456
Query: 460 SMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFI 515
S A ++F+++ ER++ +W MI G+A+ G DA+ +FS+ K + P+
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKM 573
+ AC+ L + G +++ + S+ ++V+ ++DM G +D A + M
Sbjct: 517 CILMACAHLSSLRMGKQIHAYVTRHHEYESSV-YFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 574 PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
P +V W +M+ MHG G +I +++ KAG VP + S L
Sbjct: 576 PKRNEVS-WTSMMSGYGMHGR---GKEALDIFDKMQ--------KAGFVPDDISFLV 620
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
++EG++ AI V + + D T ++ACG+ + A H + V
Sbjct: 125 IEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNV 184
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MYS S++DA VF +T + D+ SW++++ K A+D+FS+
Sbjct: 185 FVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEM 244
Query: 503 ------KQAGLKPDDQIFIGVFSACSAL 524
K + D + + AC++L
Sbjct: 245 TTIVHEKATNERSDIISIVNILPACASL 272
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 25/152 (16%)
Query: 395 IEVLGLLEKQCISVDL-PT-FSQLMQACGDAKALEEAKAVHEHV---------ERLLS-- 441
++ L + +C D+ PT F+ L++ C +++ + +H+ + LLS
Sbjct: 14 VQFLSVASAECTGRDVSPTHFASLLKEC---RSVNTVRQIHQKIIAYGLLSYPASLLSVS 70
Query: 442 --PLRVSTY-------NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
PL +Y G++ Y C + DA SV + W+ ++ + G
Sbjct: 71 LPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRL 130
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ A+ + + +AG KPD AC L
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGEL 162
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 244/401 (60%), Gaps = 16/401 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V++G +EA+++ + ++ + D TF+ ++A + ++ K +H V RL L
Sbjct: 422 VQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRL--GLLS 479
Query: 446 STYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
S ++G ++ MY+ C SM DA VF M +R++ W+ +I+ +++NG E F+
Sbjct: 480 SVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMI 539
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
++GL PD F+ V +ACS G V + + +F SM++ Y + P KHY +++D+L +G
Sbjct: 540 ESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRF 599
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--------LNE 615
+EA I +MP EPD +W ++N CR+H N +L + A+ + ++D R N
Sbjct: 600 NEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNI 659
Query: 616 KSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++AG NA+++ K E+ KK+ + + +E+ +VH + A D +HP+T++I I
Sbjct: 660 YAEAGKWE-NAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINS 718
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L M + GY P+T L ++D+E K E+L HSERLA++ L+++P +PI IMKNLR
Sbjct: 719 LVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRA 778
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A+K+ISKIVGRE+ +RD+ RFHHF+DG CSC DYW
Sbjct: 779 CVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA + + + + D TF+ L+ D L+E +H H+ R + +N +
Sbjct: 125 KEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSL 184
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y + +D A +FS M +D S++ MITG+ K G E+A+ +F Q + +P
Sbjct: 185 VDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSG 244
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F + DV+ G +H ++ Y V + +++D Y+D A
Sbjct: 245 FTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY--VWDIFVANALLDFYSKHDYIDLAKNLF 302
Query: 571 EKMP 574
++MP
Sbjct: 303 DEMP 306
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F+ ++ L + H + V N ++ MY++C+ +DA +F+N+
Sbjct: 348 FATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R+ W +I+ + + G E+A+ +F + + + D F A + L V G
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
S+ + G++ S+ +VDM + G + +A+E ++MP + ++ W L++ +
Sbjct: 468 LHSSVIR-LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYSQN 525
Query: 593 GNLE 596
G+ E
Sbjct: 526 GDAE 529
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R S+ N ++ Y + ++ A +F +M R+ SW MI G+++N ++A ++++
Sbjct: 73 PYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYT 132
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++G+KPD F + S + E +L S +G S+ + S+VD T
Sbjct: 133 EMCRSGVKPDHITFATLLSGFDDTTTLKE-VLQIHSHIIRFGFSASLIVFNSLVDSYCKT 191
Query: 561 GYLDEALEFIEKMPMEPDV 579
LD A + +MP + V
Sbjct: 192 CCLDIASQLFSEMPTKDSV 210
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N +L YS+ D +D A ++F M E D S++ +ITG+A NG E + D+F + +
Sbjct: 283 NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 231/401 (57%), Gaps = 11/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G AIE+ ++ S + T + +++AC LE + VH HV +
Sbjct: 241 IAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDR 300
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + +N +L MY +C S++DA ++F M +RD+ SW TM++G A+NG +A+ +F
Sbjct: 301 DLIL--HNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G+ P+ +GV ACS G V +G +F SM + +GI P +H+ +VD+LG G
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAG 418
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-----RLNEK 616
LDEA+EFI M +EPD +W L+ CRMH N L A + +L+P L
Sbjct: 419 KLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSN 478
Query: 617 SKAGLVPVNASE----LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A L +E +++ +K ++ +E+ +VH + AGD SHP +D I +
Sbjct: 479 TYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNR 538
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++K GY+P+T FVL D+ E KE+ L HSE++A+ G + + PIRIMKNLR+
Sbjct: 539 LIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRI 598
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ K++SK GR ++IRD RFHHF+DG CSC DYW
Sbjct: 599 CGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+G+ +EA+ L + + ++ + TFS ++ AC L AVH + V
Sbjct: 149 DGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDSDVFV 205
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ ++ Y + +D VF M RDL W+++I GFA++G G A+++F + K AG
Sbjct: 206 RSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGF 265
Query: 508 KPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ V AC+ + + G +H + D ++ + +++DM G L++A
Sbjct: 266 SSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDRDLIL----HNALLDMYCKCGSLEDA 321
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
+MP + DV W +++
Sbjct: 322 DALFHRMP-QRDVISWSTMVS 341
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR------VSTYNGILKMYSECDSMD 462
D + ++L++ C + + +H HVE PL + N + MY++ +D
Sbjct: 63 DPVSLTRLVKLCVRHGTADHGRLIHRHVEAH-GPLPHDGAGGLFVSNSLASMYAKFGLLD 121
Query: 463 DAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
DA +F M R++ +W T++ A +G ++A+ ++ G+ P+ F V AC
Sbjct: 122 DALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGAC 181
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+ G + +H ++ G+ + S++D G LD ++M + D+ V
Sbjct: 182 TTPGMLTA--VHASTVKA--GLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM-VTRDLVV 236
Query: 582 WEKLM 586
W ++
Sbjct: 237 WNSII 241
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 231/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ +EA V ++ + D T L+ AC AL+ + H V
Sbjct: 413 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 472
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N ++ MY++C +D + VF+ M RD+ SW+TMI G+ +GLG++A +F +
Sbjct: 473 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 532
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G PD FI + SACS G V+EG F M YG+ P M+HY+ +VD+L G
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGG 592
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+LDEA EFI+ MP+ DV VW L+ CR++ N++LG + + ++++L P N
Sbjct: 593 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 652
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG + K + KK + +E+ +H + GD SHP++ +IY +
Sbjct: 653 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 712
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K+ GY P+T FVL D+++E KE+AL+ HSE+LA+++G+LS I + KNLRV
Sbjct: 713 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 772
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +K IS + R +I+RDA RFHHFK+G CSC D+W
Sbjct: 773 CGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V ++ +A + + Q + PT + ++AC L + +H + +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ N +L MY++ +D A ++F M +D S+ +++G+ +NG E+A +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD + + ACS L + G S+ G+ +++DM
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 489
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + MP D+ W ++ +HG
Sbjct: 490 GRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF ++AC +A+H H L + L VST +L MY +C + DA +F+
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVST--ALLDMYVKCACLPDAAHIFA 184
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVD--IFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M RDL +W+ M+ G+A +G+ AV + Q + L+P+ + + + G +
Sbjct: 185 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 244
Query: 528 VEGM----------LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
+G LH SK + + +++DM G L A + MP
Sbjct: 245 AQGTSVHAYRIRACLHSNRNSKS-KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303
Query: 578 DVDVWEKLM 586
+V W L+
Sbjct: 304 EV-TWSALI 311
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L MY++C S+ A VF M R+ +W +I GF A +F GL
Sbjct: 277 TALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336
Query: 509 PDDQIFIG-VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
I AC++L + G ++ G+ + S++ M G +D+A+
Sbjct: 337 FLSPTSIASALRACASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 568 EFIEKMPMEPDV 579
++M ++ V
Sbjct: 396 ALFDEMAVKDTV 407
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 232/403 (57%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G + A+ + + T+S + + ALE+ K VH HV +
Sbjct: 225 ISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQ 284
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N +L MY++ SM DA VF + +DL +W++M+T FA+ GLG++AV F +
Sbjct: 285 KLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++G+ + F+ + +ACS G V EG +FE M K+Y + P + HYV++V +LG G
Sbjct: 345 MRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAG 403
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+ AL FI KMPMEP VW L+ CRMH N ++G A+ V +LDP + L
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD--DSGPPVLL 461
Query: 622 VPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS + K KK + + +E+ + VH + A D +HP+ ++IY +
Sbjct: 462 YNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMW 521
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++++ GY+P+ +VL +D + KE L HSE+LA++ L+ PA A IRIMKN+
Sbjct: 522 GEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNI 581
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCHSA K ISK+ GRE+++RD RFHHF G CSC DYW
Sbjct: 582 RICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L LL+ ++ + + AC +K LE+A+ +H H+ N ++ MY +
Sbjct: 39 LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ DA +VF M +D+ SW ++I G+A+N + +A+ + + KP+ F +
Sbjct: 99 CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
A A D G +++ G + +++DM G +D A +K+ +
Sbjct: 159 LKAAGAYADSGTGR-QIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217
Query: 578 DVDVWEKLMN 587
V W L++
Sbjct: 218 GVS-WNALIS 226
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 395 IEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+E +GLL P TF+ L++A G + +H + V + +
Sbjct: 134 VEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSAL 193
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY+ C MD A +VF + ++ SW+ +I+GFA+ G GE A+ F++ + G +
Sbjct: 194 LDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATH 253
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ VFS+ + LG + +G +H + + + + +++DM +G + +A +
Sbjct: 254 FTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGN--TLLDMYAKSGSMIDARKVF 311
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+++ D+ W ++ +G
Sbjct: 312 DRVD-NKDLVTWNSMLTAFAQYG 333
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 245/441 (55%), Gaps = 21/441 (4%)
Query: 344 SGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
+G ++ GM+ A +V + D+ + ++ + G VKEG+ + A+ V +
Sbjct: 207 AGYVRAGMVGVAREVFDGMPVRDEVSWST----------VIGGYVKEGEPEVALGVFKNM 256
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
Q + + + A LE+ K VHE V+R+ + V+ ++ MYS+C S+
Sbjct: 257 VAQGVKANEAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSV 316
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A VF M RD+ +W++MI G A +GLG DAV +F +F G P F+GV +AC
Sbjct: 317 AAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNAC 376
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
S G V EG +F+ M++ Y I M+HY +VD+L G + EA+E IE M + PD +
Sbjct: 377 SRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVL 436
Query: 582 WEKLMNLCRMHGNLELGDRCAEIVEQLDPSR---------LNEKSKAGLVPVNASELAKE 632
W +++ C+ HG ++LG + +LDP+ + K+K +L
Sbjct: 437 WGTILSACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSN 496
Query: 633 KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHD 692
+ K A +L+E VH++ GD +H ++ +IY ++ + ++ EAGY+P+ VLHD
Sbjct: 497 RGTSKSAGWSLMEAHGIVHKFLVGDMNHKDSARIYNMLCTINRRLAEAGYVPDVSSVLHD 556
Query: 693 IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELI 752
I E K A+ HSERLA+++G + A +PIRI+KNL VCGDCH K+++K+ GRE++
Sbjct: 557 IGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFSKMVTKVFGREIV 616
Query: 753 IRDAKRFHHFKDGLCSCRDYW 773
+RD RFHH KDG CSC DYW
Sbjct: 617 VRDGSRFHHMKDGKCSCHDYW 637
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
CGD A+ + + L V T+N +L Y + A VF M RD S
Sbjct: 179 VCGDVAAMRKV------FDELPIVRDVVTWNAVLAGYVRAGMVGVAREVFDGMPVRDEVS 232
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W T+I G+ K G E A+ +F G+K ++ + SA + LG + +G E +
Sbjct: 233 WSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALSAAAQLGLLEQGKFVHE-VV 291
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
K G+ S+ +++DM G + A E + MP DV W ++ HG LG
Sbjct: 292 KRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRR-DVFAWNSMICGLATHG---LG 347
Query: 599 DRCAEIVEQLD-----PSR------LNEKSKAGLV 622
++ E+ P+ LN S+ GLV
Sbjct: 348 HDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLV 382
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 224/387 (57%), Gaps = 17/387 (4%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+L Q + +D ++ +C + AL++ + VH + + + ++ MY+ C
Sbjct: 315 MLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCG 374
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+++DA F M E+D+ W+ MI G NG G DA+D+F Q K +GL PD+ F+ V
Sbjct: 375 NLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLY 434
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ACS G V EG+ F M K +P+++HY ++D+LG G LD A FI MP +PD
Sbjct: 435 ACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDF 494
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLA 639
DV+ L+ CR+HGN++LG ++ + +++P N+ L+ N LA E K+
Sbjct: 495 DVYSTLLGACRIHGNIKLGHEISQKIFEMEP---NDAGYYVLLS-NMYALAGNWEGVKMT 550
Query: 640 SQNL-------------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPET 686
+L +E+ +++ + AG+ HP+ KI +++GL ++K+AGY+P T
Sbjct: 551 RASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNT 610
Query: 687 RFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKI 746
+L D+ + K++ L HSE++A++ GL+ + IRI KNLR C DCHSA K +SK+
Sbjct: 611 NVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKV 670
Query: 747 VGRELIIRDAKRFHHFKDGLCSCRDYW 773
GR L+I+DA RFH F+DG+CSCRDYW
Sbjct: 671 FGRVLVIKDANRFHVFQDGVCSCRDYW 697
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EAI++ L+ ++ + VD T L+ A L+ +H + R
Sbjct: 195 VSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGY 254
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ +Y + +DDA VFS M +D+ +W M+TGF+ + A+ F++
Sbjct: 255 ENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNK 314
Query: 502 FKQA-GLKPDDQIFIGVFSACSALGDVVEG----MLHFESMSKDYGIVPSMKHYVSIVDM 556
LK D + +G+ S+CS G + +G L ++ + V S +++DM
Sbjct: 315 MLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGS-----AVIDM 369
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G L++A F M E DV W ++
Sbjct: 370 YANCGNLEDAKRFFYGMG-EKDVVCWNAMI 398
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL K EAI+V + + T S ++ A + + AK+VH R
Sbjct: 94 ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS+ M A +F +M+ER++ SW+ +++G++ +G E+A+D+F+
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213
Query: 502 FKQAGLKPDDQIFIGVFSA-----CSALGDVVEGMLHFESMSKDYGIVPSMKHY-VSIVD 555
++ GL D + + A C +G + G + D KH +++D
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND-------KHIKTALMD 266
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ S +D+A +M ++ DV W ++
Sbjct: 267 IYVSHNCVDDAHRVFSEMFVK-DVAAWTLMLT 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNM 471
+ +++ D K L++ H + + S L +T+ N ++ Y C + DA +F +
Sbjct: 28 ASILRKLKDLKPLQQI-----HAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEG 530
+++ SW +I+G AKN +A+D+F + KP+ V A + LG + +
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + G ++ ++VDM G + A + E M E +V W +++
Sbjct: 143 SVHCFWVRG--GFEGNVFVETALVDMYSKFGCMGVARQLFESMS-ERNVVSWNAIVS 196
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 231/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ +EA V ++ + D T L+ AC AL+ + H V
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N ++ MY++C +D + VF+ M RD+ SW+TMI G+ +GLG++A +F +
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G PD FI + SACS G V+EG F M YG+ P M+HY+ +VD+L G
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+LDEA EFI+ MP+ DV VW L+ CR++ N++LG + + ++++L P N
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG + K + KK + +E+ +H + GD SHP++ +IY +
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K+ GY P+T FVL D+++E KE+AL+ HSE+LA+++G+LS I + KNLRV
Sbjct: 598 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 657
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +K IS + R +I+RDA RFHHFK+G CSC D+W
Sbjct: 658 CGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V ++ +A + + Q + PT + ++AC L + +H + +
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ N +L MY++ +D A ++F M +D S+ +++G+ +NG E+A +F
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD + + ACS L + G S+ G+ +++DM
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 374
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + MP D+ W ++ +HG
Sbjct: 375 GRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG 406
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF ++AC +A+H H L + L VST +L MY +C + DA +F+
Sbjct: 12 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVST--ALLDMYVKCACLPDAAHIFA 69
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVD--IFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M RDL +W+ M+ G+A +G+ AV + Q + L+P+ + + + G +
Sbjct: 70 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 129
Query: 528 VEGM----------LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
+G LH SK + + +++DM G L A + MP
Sbjct: 130 AQGTSVHAYCIRACLHPNRNSKS-KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188
Query: 578 DVDVWEKLM 586
+V W L+
Sbjct: 189 EV-TWSALI 196
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 12/179 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLR---------VSTYNGILKMYSECDSM 461
T L+ AL + +VH + R L P R V +L MY++C S+
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSA 520
A VF M R+ +W +I GF A +F GL I A
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C++L + G ++ G+ + S++ M G +D+A+ ++M ++ V
Sbjct: 235 CASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 233/403 (57%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G KEA+++ ++ + D + + + AC ALE+ K +H + +
Sbjct: 214 MISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTR 273
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++C M++A VF NM + + W +I+G+A +GLG +A+ F
Sbjct: 274 TRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFL 333
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KP+ F V +ACS G V EG F ++ +DY + P+++HY +VD+LG
Sbjct: 334 EMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRA 393
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G L+EA FI+KMP++P+ +W L+ C++H N+ELG++ EI+ ++D +
Sbjct: 394 GLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMA 453
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
++ K L +E+ K+ + + + HE+ AGD SH E +I R
Sbjct: 454 NIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWR 513
Query: 672 GLRAQMKEAGYIPETRFVLHD-IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+R +++E GY+PE +L D +D E KE + HSE+LA+++GL+ + IRIMKNL
Sbjct: 514 FVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGTTIRIMKNL 573
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH + +ISKI R++++RD RFHHFKDG CSC DYW
Sbjct: 574 RVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 34/214 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC + A +E +H H+ + + N ++ Y+ + A +F +
Sbjct: 112 TFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRI 171
Query: 472 TERDLTSWDTMITGFAK--------------------------------NGLGEDAVDIF 499
E D SW+++I G+ K G+ ++A+ +F
Sbjct: 172 QEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLF 231
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + + + PD+ SACS LG + +G +K + S+ V ++DM
Sbjct: 232 HEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCV-LIDMYAK 290
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++EAL + M + V VW L++ HG
Sbjct: 291 CGEMEEALGVFKNMKTK-SVQVWTALISGYAYHG 323
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 248/402 (61%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+ +EA+ + ++++ T+S L+ + +LE+ K +H H+ +
Sbjct: 268 ISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGK 327
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L N +L MY++ ++ DA VF + + D+ S ++M+ G+A++GLG++AV++F +
Sbjct: 328 KLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEE 387
Query: 502 FK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++P+D F+ V +ACS G + EG+ +FE M K YG+ P + HY ++VD+ G
Sbjct: 388 MMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRA 446
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLN 614
G LD+A FIE+MP+EP+ +W L+ +MH N E+G A+ V +LDP + L+
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLS 506
Query: 615 EKSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ + +++ KE ++ KK + + +E+ + VH + A D SHP+ +K+Y +
Sbjct: 507 NIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWE 566
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++KE GY+P+T V +DQ+ KE L HSE+LA++ LL++ + IRIMKN+R
Sbjct: 567 NLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIR 626
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCHSA+K +S +V RE+I+RD RFHHF+DG CSCRDYW
Sbjct: 627 VCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGIL 452
+ VL L+ + D +++L++ C L++ K VH H+ S R + N IL
Sbjct: 76 LHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMN--SKFRNDLVIKNSIL 133
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD---IFSQFKQAGLKP 509
MY++C S++ A VF M +D+ +W +MITG++++G A +F + + GL+P
Sbjct: 134 FMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRP 193
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
++ + C LG V+G YG ++ S+VDM G L E+
Sbjct: 194 NEFALSSLVKCCGFLGSCVDGK-QIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLV 252
Query: 570 IEKMPMEPDVDVWEKLMN 587
+++ + +V W L++
Sbjct: 253 FDELESKNEVS-WNALIS 269
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
S L++ CG + + K +H + V + ++ MY+ C + ++ VF +
Sbjct: 197 ALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL 256
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
++ SW+ +I+GFA+ G GE+A+ +F + ++ G + + + + S G + +G
Sbjct: 257 ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGK 316
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
LH M +V + + +++ M +G + +A + +++ ++ DV ++
Sbjct: 317 WLHAHMMKSGKKLVGYVGN--TLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIGYA 373
Query: 591 MHGNLELGDRCAEIVEQL 608
HG LG E+ E++
Sbjct: 374 QHG---LGKEAVELFEEM 388
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 248/456 (54%), Gaps = 30/456 (6%)
Query: 338 GQYQSYSGNIQNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV 386
G+ +S + ++N ++ A +V + H D F+ + + E L
Sbjct: 4 GELKSSNAILENALLNMYVRCGSLEEARKVFDAMDHPDAFSWTNMITACTENCELL---- 59
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
EA+E+ + + I T + ++ AC + AL+ K +H ++ V
Sbjct: 60 ------EALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVL 113
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+L MY++C S++ + VF+ M R+ SW MI A++G G++A+++F + G
Sbjct: 114 AQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEG 173
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ D FI V ACS G + E + F SM +DY I P+ HY +D +G G L +A
Sbjct: 174 MVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDA 233
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV---- 622
E I MP P+ W+ L+N CR+H E + AE++ +L P + G V
Sbjct: 234 EELIHSMPFHPETVTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAAT 293
Query: 623 -----PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+ + ++ KK+ ++ +EV++KVHE+ AGD +HP D+I + L +M
Sbjct: 294 ERYGDQMRVRKSMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRM 353
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+EAGY+P T+ VLH +++E KE+ + HSE+LA++ GL+++P P+ I+KNLRVC DCH
Sbjct: 354 REAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCH 413
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A K+I+KI+ R +++RD RFHHF+DG CSC+DYW
Sbjct: 414 AATKVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 449
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 240/402 (59%), Gaps = 10/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K G +EAI++ + + + D + + + AC +LE+A++++E+V R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ M+++C S++ A VF +RD+ W MI G+ +G +A+ ++
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ P+D F+G+ AC+ G V EG F M+ D+ I P +HY ++D+LG
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRA 472
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------RLN 614
G+LD+A E I+ MP++P V VW L++ C+ H ++ELG+ A+ + +DPS +L+
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 615 EKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
A + +E+ KEK K + +EVR ++ +R GD SHP ++I +
Sbjct: 533 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++KE G++ LHD++ E EE L +HSER+A+++GL+S+P P+RI KNLR
Sbjct: 593 WIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLR 652
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C +CH+A K+ISK+V RE+++RD RFHHFKDG+CSC DYW
Sbjct: 653 ACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D TF L++AC L+ + VH V RL V NG++ +Y++C + A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 466 SVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
+VF + ER + SW +++ +A+NG +A++IFSQ ++ +KPD + V +A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 524 LGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
L D+ +G +H + I P + +S+ M G + A +KM P++ +W
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILW 291
Query: 583 EKLMN 587
+++
Sbjct: 292 NAMIS 296
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+E+ + K + D ++ A + L++ +++H V ++ +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ MY++C + A +F M +L W+ MI+G+AKNG +A+D+F + ++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMS----KDYGIVPSMKHYVSIVDMLGSTGYLD 564
PD SAC+ +G + + +E + +D + S +++DM G ++
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS-----ALIDMFAKCGSVE 375
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A + ++ DV VW ++ +HG
Sbjct: 376 GA-RLVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD---AFSVFSNMTERDLTSWDT 481
A +A+ H L+ L+ S + I K+ S D A VF ++ + W+
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFL-ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+I G+++N +DA+ ++S + A + PD F + ACS L + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 234/402 (58%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +EA+ + ++ + + T ++ AC ALE K VH ++ R
Sbjct: 292 MISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKR 351
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ Y++C +DDA F +M ++ +W +I G A NG G +A+++FS
Sbjct: 352 LSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFS 411
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++A ++P D FIGV ACS V EG HF+SM++DYGI P +HY +VD+LG
Sbjct: 412 SMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRA 471
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G +DEA +FI MP+EP+ +W L++ C +H N+E+G+ + + L+PS +
Sbjct: 472 GLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLS 531
Query: 621 LVPV------NASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA+ + KE +++ K +L+E+ V E+ A D+ HP+ +IY +
Sbjct: 532 NIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVE 591
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K AGYIP T V ++D+ KE ++ HSE+LA++ GL+ A IR+ KNLR
Sbjct: 592 EMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLR 651
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHSA K+ISK+ RE+++RD RFHHFKDG CSC DYW
Sbjct: 652 VCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 341 QSYSGNIQNGMMASQ-VLNNCKHE----DDFAEASR---SSQNNGTL---EQLDGLVKEG 389
Q+Y+ ++ G+MA + VL++ H D A A + + NG + + +K G
Sbjct: 142 QAYA--VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNG 199
Query: 390 KVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
E +E+ G+LE ++ D T ++ ACG + K V E+V+ +
Sbjct: 200 NWMEVVEMFKGMLEVG-VAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C + A +F M RD+ +W MI+G+ + +A+ +FS+ + A ++
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
P+D + V SAC+ LG + G +H K + + ++VD G +D+A+
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG--TALVDFYAKCGCIDDAV 376
Query: 568 EFIEKMPME 576
E E MP++
Sbjct: 377 EAFESMPVK 385
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 382 LDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VERL 439
+ L+ G ++A+ + + +L+ + D T + +++C L+ + + + V+R
Sbjct: 90 MRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRG 149
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L R + ++ MY+ C + A +F + E + W+ +IT + KNG + V++F
Sbjct: 150 LMADRF-VLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMF 208
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ G+ D+ + V +AC +GD G E + + G+V + +++DM
Sbjct: 209 KGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEK-GLVRNRNLMTALIDMYAK 267
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L +A + M DV W +++
Sbjct: 268 CGELGKARRLFDGM-QSRDVVAWSAMIS 294
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 232/401 (57%), Gaps = 13/401 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G +EA+ V ++ + T+S +++AC ++ A +H +E+
Sbjct: 420 GFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNN 479
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ Y++C + DA VF ++ ERD+ SW+ +I+G+A +G DA+++F +
Sbjct: 480 DTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMN 539
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
++ ++ +D F+ + S C + G V G+ F+SM D+GI PSM+HY IV +LG G L
Sbjct: 540 KSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRL 599
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
++AL+FI +P P VW L++ C +H N+ LG AE + +++P +E + L
Sbjct: 600 NDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQ--DETTYVLLSN 657
Query: 624 VNASE--------LAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A+ L K N +K+ + +E++ ++H + G HP+ I A++
Sbjct: 658 MYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEW 717
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L + GYIP+ VLHD+D+E K L HSERLA+++GL+ +P PIRI+KNLR
Sbjct: 718 LNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRS 777
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+A +ISKIV RE+I+RD RFHHF+DG CSC DYW
Sbjct: 778 CLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A E+ L + + + + S ++QAC + L+ K +H H ++ + N +
Sbjct: 327 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 386
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C+ MD + +FS++ + + SW+T++ GF+++GLGE+A+ +F + + A +
Sbjct: 387 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 446
Query: 512 QIFIGVFSACSALGDVVE-GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ V AC++ + G +H + + + S++D GY+ +AL+
Sbjct: 447 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVF 504
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGN----LELGDR 600
+ + ME D+ W +++ +HG LEL DR
Sbjct: 505 QHL-MERDIISWNAIISGYALHGQAADALELFDR 537
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 408 VDLPTFSQLMQAC---GDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMD 462
VD ++ +Q C GDA+ +AVH HV R + L + N +L MY + +
Sbjct: 57 VDSFACARQLQGCIARGDARG---GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLA 113
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
A +F M ER++ S+ T++ A+ G E A +F + + G
Sbjct: 114 SARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEG 157
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 264/498 (53%), Gaps = 30/498 (6%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSY----SGN 346
H A+ +G+ + FY + G R + + P ++ +G
Sbjct: 153 HALAVKAGAAGDLYVRNALTHFYGVCGDVGAM-----RTVFDELPRVRDVVTWNAVLAGY 207
Query: 347 IQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQ 404
++ GM+ A +V D+ + ++ + G VKEG++ A+ V + ++
Sbjct: 208 VRAGMVRAAREVFEEMPVRDEVSWST----------LVGGYVKEGELDVALGVFRDMVEK 257
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
+ V+ + A LE + VHE V+R P+ V+ ++ M+S+C + A
Sbjct: 258 GVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKCGCVAVA 317
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
VF M RD+ +W+ MI G A +GLG+DAV++F +F GL P D F+GV +ACS
Sbjct: 318 REVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRC 377
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V EG +F+ M Y I P M+HY +VD+LG G + EA+E IE M + PD +W
Sbjct: 378 GLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPVLWGT 437
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ--- 641
+++ C+ H ++LG + +L+P+ + A + + +E +KL S
Sbjct: 438 VLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGT 497
Query: 642 ------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+L+E + +H++ GD H ++ +IY ++ + ++ +AGY+P+ VLHDI
Sbjct: 498 GKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGD 557
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E K A+ HSERLA+++G + + +PIRI+KNL+VCGDCH K+++K+ RE+I+RD
Sbjct: 558 EEKVHAIKVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRD 617
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHH K+G CSC DYW
Sbjct: 618 GSRFHHMKEGKCSCLDYW 635
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 223/373 (59%), Gaps = 13/373 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++ AC + LE ++VH + + + ++ MY +C S+++A VFS +
Sbjct: 313 ISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP 372
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA--GLKPDDQIFIGVFSACSALGDVVEG 530
ER+L +W+ MI G+A G + A+ +F + G++P I + S CS +G V G
Sbjct: 373 ERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERG 432
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ FESM +YGI P +H+ +VD+LG +G +D A EFI+ M ++P + VW L+ CR
Sbjct: 433 IQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACR 492
Query: 591 MHGNLELGDRCAEIVEQLD-------PSRLNEKSKAGLVPVNASELAKEKEN---KKLAS 640
MHG ELG AE + +LD N + AG A+ + KE ++ KK
Sbjct: 493 MHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWE-EATVVRKEMKDIGIKKNVG 551
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ + V++++H ++A D+SH +I A++ LR MKEAGY+P+T L D++ E K
Sbjct: 552 YSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKAS 611
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+ HSE++A++ GL++ P PIRI KNLR+CGDCHSA+K IS+IVGRE+I+RD RFH
Sbjct: 612 EVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFH 671
Query: 761 HFKDGLCSCRDYW 773
FKDG CSC+DYW
Sbjct: 672 RFKDGCCSCKDYW 684
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + AC D L + +H + R VS NG++ Y +C + A VF+ +
Sbjct: 211 TFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRI 270
Query: 472 TER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R ++ SW +M+ +N E A +F Q ++ ++P D + V SAC+ LG + G
Sbjct: 271 GNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELG 329
Query: 531 ----MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
L ++ +D V S ++VDM G G ++ A + ++P E ++ W ++
Sbjct: 330 RSVHALAVKACVEDNIFVGS-----ALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMI 383
Query: 587 NLCRMHGNLELGDRCAE 603
G++++ R E
Sbjct: 384 GGYAHQGDIDMALRLFE 400
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 430 KAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
+ +H H+ R ++PL N ++ MYS+ D ++ A V S R + +W ++I+G
Sbjct: 26 RTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVH 85
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
N A+ F+ ++ ++P+D F VF A SA + ++ G++ +
Sbjct: 86 NRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA-SAFVQIPMTGKQIHGLALKGGMIYDVF 144
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMP 574
S DM TG+ +A ++MP
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMP 170
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 229/379 (60%), Gaps = 23/379 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ L S LR S ++ MYS+C ++ A
Sbjct: 298 TMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS----LIDMYSKCGDIEAAH 353
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF++M + L +W+ MI GFA +G A DIFS+ ++ +KPDD F+G+ SACS G
Sbjct: 354 QVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAG 413
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F SM+ +Y I P ++HY ++D+LG +G EA E I M MEPD +W L
Sbjct: 414 MLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSL 473
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKEKE 634
+ C+MHGN+ELG++ A+ + +++P+ N S L + A+ L +K
Sbjct: 474 LKACKMHGNVELGEKFAQNLFKIEPN--NPGSYVLLSNIYATAGRWNEVARIRGLLNDKG 531
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
KK+ + +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL +++
Sbjct: 532 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEME 591
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I R
Sbjct: 592 EEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 651
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHF+DG+CSC DYW
Sbjct: 652 DRTRFHHFRDGVCSCNDYW 670
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G KEA+E+ + K + D T ++ A + ++E + VH +
Sbjct: 166 MISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG 225
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ YS+C M+ A +F ++ +D+ SW+ +I G+ L ++A+ +F
Sbjct: 226 FGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQ 285
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++G P+D + + AC+ LG + G +H + G+ + S++DM
Sbjct: 286 EMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSK 345
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + M + + W ++ MHG
Sbjct: 346 CGDIEAAHQVFNSM-LHKSLPAWNAMIFGFAMHG 378
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C KA +E +H HV +L L + + ++ MY + + ++DA VF
Sbjct: 65 TFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS 124
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
+ RD+ S W+ MI+G+ + G ++A+++F
Sbjct: 125 SHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFK 184
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SA + G + G S D+G ++K +++D
Sbjct: 185 EMMKTNVRPDESTMVTVISASARSGSIELGR-QVHSWIADHGFGSNLKIVNALIDFYSKC 243
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A + + DV W L+
Sbjct: 244 GEMETACGLFLGLSYK-DVISWNILI 268
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 233/407 (57%), Gaps = 18/407 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + ++A+E L+ + + + ++ +C AL + HE+V R
Sbjct: 220 MISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNK 279
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ MY+ C +++ A VF + E+D+ W +I G A +G E A+ FS
Sbjct: 280 LSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFS 339
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G P D F V +ACS G V G+ FESM +D+G+ P ++HY +VD+LG
Sbjct: 340 EMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRA 399
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------- 610
G L +A +F+ KMP++P+ +W L+ CR+H N+E+G+R +I+ ++ P
Sbjct: 400 GKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLS 459
Query: 611 ---SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+R N+ ++ ++ K+K +K +L+E+ KVHE+ GD +HPE +KI
Sbjct: 460 NIYARANKWKDVTVM----RQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIE 515
Query: 668 ALIRG-LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
+ + ++K AGY+ T + DID+E KE AL HSE+LA+++G++ A PIRI
Sbjct: 516 RIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRI 575
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVC DCH+A K+ISK+ ELI+RD RFHHFK+G CSC DYW
Sbjct: 576 VKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKEGTCSCMDYW 622
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ ++ Y C A +F M ER+L +W TMI+G+A+N E AV+ F +
Sbjct: 183 VVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQA 242
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ ++ + +GV S+C+ LG + G E + ++ + ++ ++VDM G ++
Sbjct: 243 EGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRN-KLSLNLILGTAVVDMYARCGNVE 301
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+A+ E++P E DV W L+ MHG E
Sbjct: 302 KAVMVFEQLP-EKDVLCWTALIAGLAMHGYAE 332
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 248/431 (57%), Gaps = 20/431 (4%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A +V N + +D + S L GL K G +E++ + ++ I D T
Sbjct: 65 AQEVFNRIREKDVLSWTS----------MLSGLAKSGYFQESLALFRKMQLHKIEPDEIT 114
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++ AC AL++ K +H +++ + ++ MY++C S+D A VF M
Sbjct: 115 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 174
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R++ +W+ MI G A +G GEDA+ +F Q + L PDD FI + ACS G V EG+
Sbjct: 175 VRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLA 234
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
F++M + I P M+HY +VD+L +D+AL FIE MP++ + +W L+ CR
Sbjct: 235 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSG 294
Query: 593 GNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVN-ASELAKEKENK---KLASQNL 643
G+ +L ++ V +L+P + AG+ + A +L K+ +NK K +
Sbjct: 295 GHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSW 354
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEAL 702
+E+ +H++ AGD SH +T++IYA+I + ++ + G++P T VL DI++E KE +L
Sbjct: 355 IELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSL 414
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+P+ +PIRI+KNLRVC DCHS LK+ SK+ RE++ RD RFHHF
Sbjct: 415 FLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHF 474
Query: 763 KDGLCSCRDYW 773
K+G CSC D+W
Sbjct: 475 KEGSCSCMDFW 485
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T L+ AC LE K +H + + L +S N IL MY +CD ++ A VF
Sbjct: 10 DEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVF 69
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ + E+D+ SW +M++G AK+G ++++ +F + + ++PD+ +GV SAC+ G +
Sbjct: 70 NRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGALD 129
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G + + + I + ++VDM G +D AL+ +M + +V W ++
Sbjct: 130 QGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNAMIGG 187
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL 613
MHG+ G+ + +Q++ +L
Sbjct: 188 LAMHGH---GEDAISLFDQMEXDKL 209
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 238/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G VK +++EA+E+ ++ D T +++AC ++ L K +H +V R
Sbjct: 552 IGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWK 611
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ N ++ MY++C + + +VF M +D+ SW+TMI +G G++A+ +F +
Sbjct: 612 DWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEK 671
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ +KPD F V SACS V EG+ F SMS+D+ + P +HY +VD+ G
Sbjct: 672 MLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAG 731
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLN 614
L+EA FI++MPMEP W+ + CR++ N+EL A+ + ++DP + N
Sbjct: 732 CLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFN 791
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A L +L KE+ K + V ++VH + AGD S+ E+DKIY +
Sbjct: 792 ILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDE 851
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L A++K AGY P+T +VLHDIDQE K E+L HSE+LAV+ G+L+ ++ IR+ KNLR+
Sbjct: 852 LFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 911
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K +S +VG +++RD+ RFHHFK+G CSC+D+W
Sbjct: 912 CGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T S ++ AC D + L+ KA+H + V N ++ +Y C + +A +VF
Sbjct: 241 DPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF 300
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M R++ +W+++ + + G + +++F + G+KPD + ACS L D+
Sbjct: 301 DLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLK 360
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
G + +G+V + ++V++ + + EA + MP +V W L
Sbjct: 361 SGKT-IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ C D + L+ K +H V R V + + Y++C + +A +VF M
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ +W+++ + + G + +++F + G+KPD + SACS L D+ G
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ +G+V ++ ++V++ S + EA + MP +V W L
Sbjct: 263 -AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWNSL 314
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 45/225 (20%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL T ++ AC D + L+ K +H R V N +L +Y++C + +A VF
Sbjct: 443 DLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVF 502
Query: 469 SNMTERDLTSWDTMIT-----------------------------------GFAKNGLGE 493
+ R++ SW+ ++T G KN E
Sbjct: 503 DLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIE 562
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV----EGMLHFESMSKDYGIVPSMKH 549
+A++IF + + G KPD+ + ACS L + + E + KD+ + +
Sbjct: 563 EAMEIFRKMQTMGFKPDETTIYSILRACS-LSECLRMGKEIHCYVFRHWKDWDLARTN-- 619
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
++VDM G L + + MP++ DV W ++ MHGN
Sbjct: 620 --ALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN 661
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G EAI++ + I D P F + +AC ++ + K H+ R V
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S N + Y +C ++ A VF ++ RD+ +W+++ + G + +++F +
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+K + + CS L D+ G +G+V + + V+ + E
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGK-EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194
Query: 566 ALEFIEKMPMEPDVDVWEKL 585
A + MP DV W L
Sbjct: 195 AQTVFDLMP-HRDVVTWNSL 213
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D S ++ AC K L+ K +H + V ++ +Y+ C + +A +VF
Sbjct: 342 DPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVF 401
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M R++ +W+++ + + G + +++F + G+KPD + + ACS L D+
Sbjct: 402 DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLK 461
Query: 529 EG 530
G
Sbjct: 462 SG 463
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 226/399 (56%), Gaps = 11/399 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V EG+ +A+ K+ I S ++ AC LE K+VH + +
Sbjct: 185 VLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNI 244
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ ++ MY +C S++DA F M ER+L +W+ MI G+A G + AV +F +
Sbjct: 245 FVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCG 304
Query: 506 G--LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ P+ F+ V SACS G V GM FESM YGI P +HY +VD+LG G +
Sbjct: 305 SHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMV 364
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKS 617
++A +FI+KMP+ P V VW L+ +M G ELG A+ + +LDP L+
Sbjct: 365 EQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMF 424
Query: 618 KAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
A A+ + KE ++ KK A + + + VH ++A DTSH +I A++ LR
Sbjct: 425 AAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLR 484
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M+ AGYIP+T F L D+++E K + HSE++A++ GL+S PA PIRI KNLR+CG
Sbjct: 485 GEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICG 544
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHSA+K IS IVGRE+I+RD FH F+D CSCRDYW
Sbjct: 545 DCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ A+ + + I + TF +A G ++ K VH +
Sbjct: 80 IAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ 139
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V MYS+ ++A +F M ER++ +W+ ++ G +DA+ F +
Sbjct: 140 ISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE 199
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G++P D + V SAC+ L V+E +++ +V ++ ++VDM G G
Sbjct: 200 ARKEGIEPTDFMVSSVLSACAGL-SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCG 258
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
+++A ++MP E ++ W ++
Sbjct: 259 SIEDAERAFDEMP-ERNLVTWNAMI 282
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL-SPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+ + L+++ + +A H + + L +PL YN ++ MYS+ D + A + S
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R + +W +I G +NG A+ FS ++ ++P+D F F A +L + G
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++ G + + S DM G +EA + ++MP E ++ W ++
Sbjct: 128 K-QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAYLS 182
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 210/334 (62%), Gaps = 9/334 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY+ S++ A +F T+RDL SW++M++G+A++G + A+D+F Q + G++
Sbjct: 545 SALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIE 604
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F+ V C+ G V EG +F+SM++DYGI P+M+HY +VD+ G LDEA+
Sbjct: 605 MDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMS 664
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEKSKAGL 621
IE M VW L+ C++H N+ELG AE + L+P N S AG
Sbjct: 665 LIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGK 724
Query: 622 VPVN--ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+L K+ KK A + +++++KVH + A D SHP +++IYA +R + ++K+
Sbjct: 725 WKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQ 784
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
GY P+T F LH++ +E KE L HSERLA++ GL+++P AP+ I KNLRVCGDCH+
Sbjct: 785 EGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTV 844
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K++SKI RE+++RD RFHHF G+CSC D+W
Sbjct: 845 IKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G +++G + + +E+ + + + + TF+ ++ ++ + VH +
Sbjct: 177 LTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGC 236
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++C +++A VF M RD+ SW+T++ G NG +A+ +F
Sbjct: 237 CSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHD 296
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSK---DYGIVPSMKHYVSIVDML 557
+ + + V C+ + + + LH + + YG V + +++D
Sbjct: 297 SRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT-----ALMDAY 351
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
G L AL+ M +V W ++N C +G++ L
Sbjct: 352 SKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLA 392
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 329 RQYQQNPNEGQYQSYSGNIQNGMM-----ASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
RQ + + + SY GN+ +M A Q+ N D F S S ++
Sbjct: 326 RQLHSSVLKRGFHSY-GNVMTALMDAYSKAGQLGNAL---DIFLLMSGSQNVVSWTAMIN 381
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G ++ G V A + + + ++ + T+S ++ A +H V +
Sbjct: 382 GCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYEC 437
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+L YS+ + ++A S+F + ++D+ SW M+T +A+ G + A +IF +
Sbjct: 438 TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
GLKP++ V AC++ V+ F ++S + ++ ++V M G +
Sbjct: 498 MHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI 557
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ A E+ + D+ W +++ HG
Sbjct: 558 ESAQCIFERQT-DRDLVSWNSMLSGYAQHG 586
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ MY + S+ D VF M +R++ +W +++TG+ ++G D +++F + +
Sbjct: 139 VGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRA 198
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ P+ F V S ++ G V G + S +G ++ S+++M G ++
Sbjct: 199 EGVWPNSVTFASVLSVVASQGMVDLGR-RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
EA M D+ W LM
Sbjct: 258 EARVVFCGMETR-DMVSWNTLM 278
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 231/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G E++ + + ++ + D ++ AC A+ +A+ + ++++R
Sbjct: 304 MIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 363
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ M+++C ++ A +F M E+++ SW MI + +G G A+D+F
Sbjct: 364 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 423
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G+ P+ + + ACS G V EG+ F M +DY + +KHY +VD+LG
Sbjct: 424 MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRA 483
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEAL+ IE M +E D +W + CR H ++ L ++ A + +L P
Sbjct: 484 GRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLS 543
Query: 621 LVPVNAS---------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA +L ++ KK+ +EV +K H++ GDT+HP + +IY +++
Sbjct: 544 NIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 603
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +++ GY+P+T FVLHD+D+E K L +HSE+LA++ GL+++P PIRI+KNLR
Sbjct: 604 SLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLR 663
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ K++S I GR +I+RDA RFHHFK+G CSC DYW
Sbjct: 664 VCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + GK E++ + + ++ + D ++ AC A+ +A+ + ++++R
Sbjct: 102 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 161
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY++C ++ A +F M E+++ SW MI + +G G A+D+F
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLG 558
+G+ PD + ACS L ++ G L + K +G+ + H+V ++VDM G
Sbjct: 222 MMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYK-FGL--DLDHFVCAALVDMYG 278
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++A +KMP E D+ W ++
Sbjct: 279 KCREIEDARFLFDKMP-ERDLVTWTVMI 305
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ ++A+++ ++ + D T + L+ AC D K L+ + +H V + L
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY +C ++DA +F M ERDL +W MI G+A+ G +++ +F + ++ G+
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLD 564
PD + V AC+ L G +H DY + V +++DM G ++
Sbjct: 331 PDKVAMVTVVFACAKL-----GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 385
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A E ++M E +V W ++ HG
Sbjct: 386 SAREIFDRME-EKNVISWSAMIAAYGYHG 413
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC D K L+ + +H V + L ++ MY +C ++DA +F M
Sbjct: 32 TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM 91
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ERDL +W MI G+A+ G +++ +F + ++ G+ PD + V AC+ L G
Sbjct: 92 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL-----GA 146
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + DY + V +++DM G ++ A E ++M E +V W ++
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIA 205
Query: 588 LCRMHG 593
HG
Sbjct: 206 AYGYHG 211
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 238/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +E ++ +++ D TF ++ +C + L + + +H V + +
Sbjct: 257 IAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGA 316
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L VS + ++ MYS C ++ + VF D+ W +MI + +G G +A+D+F+Q
Sbjct: 317 SLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQ 376
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q L+ +D F+ + ACS G +G+ F+ M + YG+ P ++HY +VD+LG G
Sbjct: 377 MEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYG 436
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
++EA I MP++ DV W+ L++ C++H E+ R +E V +LDP S
Sbjct: 437 SVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSN 496
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++ K + + ++++ KK + LEV++++H++ GD SHP++ +I + +R
Sbjct: 497 IHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRE 556
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++MK+ GY+P+ VLHD+D E KE +L+ HSE+LA++ LL +P PIR++KNLRV
Sbjct: 557 LTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRV 616
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K IS+I RE+I+RD+ RFHHFK+G CSC DYW
Sbjct: 617 CSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++ C +AL + VH +V + + + + MY +C S+ + + M ++
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHF 534
+ +W+T+I G A+NG E+ +D ++ K AG +PD F+ V S+CS L + +G +H
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE-FIEKMPMEPDVDVWEKLMNLCRMHG 593
E + ++ S+ S++ M G L+ +L+ F+E DV W ++ HG
Sbjct: 310 EVIKAGASLIVSV--ISSLISMYSRCGCLEYSLKVFLE--CENGDVVCWSSMIAAYGFHG 365
Query: 594 NLELGDRCAEIVEQLDPSRL 613
G ++ Q++ +L
Sbjct: 366 R---GVEAIDLFNQMEQEKL 382
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 33/205 (16%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF---- 468
FS L+Q+C +L K +H + N +L +YS+C +D A ++F
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 469 ---------------------------SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
M ER++ +W+ M+ G + E+ + +FS+
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G PD+ V C+ L +V G + G ++ S+ M G
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGR-QVHGYVRKCGFEFNLVVVSSLAHMYMKCG 233
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
L E I MP + +V W L+
Sbjct: 234 SLGEGERLIRAMPSQ-NVVAWNTLI 257
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 233/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V + +EA+E+ ++ +S D T ++ AC ALE + V ++ R
Sbjct: 226 MIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 285
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MYS+C S++ A VF M RD +W +I G A NG E+A+++F
Sbjct: 286 IKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFH 345
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + PD+ FIGV +AC+ G V +G F SM + Y I P++ HY I+D+LG
Sbjct: 346 RMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRA 405
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G + EAL+ I++MPM P+ +W L+ CR+HGN E+G+ AE + +LDP E S
Sbjct: 406 GKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDP----ENSMVY 461
Query: 621 LVPVNA-------------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
++ N EK KK +L+E+ +HE+ AGD SHP + +IY
Sbjct: 462 ILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIY 521
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + + + + GY P+ V ++ ++ K++ L HSE+LA++ LLSS IRI+
Sbjct: 522 SKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIV 581
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+C DCH+A+K+IS++ GRE+++RD RFHHF+ G CSC+DYW
Sbjct: 582 KNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 41/198 (20%)
Query: 412 TFSQLMQACGD-AKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSM------- 461
T+ ++ ACG + + VH V +L LRV N ++ MY+EC M
Sbjct: 124 TYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVE--NALVDMYAECADMGSAWKVF 181
Query: 462 ------------------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
D+A +F M ERD SW MI G+ +A++
Sbjct: 182 DGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALE 241
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVD 555
+F + + + + D+ + V +AC+ LG + G MS+ GI M +V +++D
Sbjct: 242 MFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQ-GI--KMDAFVGNALID 298
Query: 556 MLGSTGYLDEALEFIEKM 573
M G ++ AL+ + M
Sbjct: 299 MYSKCGSIERALDVFKGM 316
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 37/198 (18%)
Query: 409 DLPTFSQLMQAC----GDAKALEEAKAVHEHVERLLSPLRVSTYNGILK----------- 453
D TF L++A G + + A+AVH HV RL + ++
Sbjct: 18 DAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAA 77
Query: 454 --MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ ECD+ +W+ +I+G + G ++ F +AG P
Sbjct: 78 RALVGECDTP---------------VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTP 122
Query: 512 QIFIGVFSAC-SALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
++ V SAC DV+ GM +H + G++P ++ ++VDM + A +
Sbjct: 123 VTYVSVLSACGKGTRDVLLGMQVHGRVVGS--GVLPDLRVENALVDMYAECADMGSAWKV 180
Query: 570 IEKMPMEPDVDVWEKLMN 587
+ M + V W L++
Sbjct: 181 FDGMQVRSVVS-WTSLLS 197
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 240/402 (59%), Gaps = 10/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G K G +EAI++ + + + D + + + AC +LE+A++++E+V R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ M+++C S++ A VF +RD+ W MI G+ +G +A+ ++
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ P+D F+G+ AC+ G V EG F M+ D+ I P +HY ++D+LG
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRA 472
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------RLN 614
G+LD+A E I+ MP++P V VW L++ C+ H ++ELG+ A+ + +DPS +L+
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 615 EKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
A + +E+ KEK K + +EVR ++ +R GD SHP ++I +
Sbjct: 533 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++KE G++ LHD++ E EE L +HSER+A+++GL+S+P P+RI KNLR
Sbjct: 593 WIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLR 652
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C +CH+A K+ISK+V RE+++RD RFHHFKDG+CSC DYW
Sbjct: 653 ACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D TF L++AC L+ + VH V RL V NG++ +Y++C + A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 466 SVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
+VF + ER + SW +++ +A+NG +A++IFS ++ +KPD + V +A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC 234
Query: 524 LGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
L D+ +G +H + I P + +S+ M G + A +KM P++ +W
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILW 291
Query: 583 EKLMN 587
+++
Sbjct: 292 NAMIS 296
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+E+ + K + D ++ A + L++ +++H V ++ +
Sbjct: 201 GEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ MY++C + A +F M +L W+ MI+G+AKNG +A+D+F + ++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMS----KDYGIVPSMKHYVSIVDMLGSTGYLD 564
PD SAC+ +G + + +E + +D + S +++DM G ++
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS-----ALIDMFAKCGSVE 375
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A ++ ++ DV VW ++ +HG
Sbjct: 376 GARLVFDR-TLDRDVVVWSAMIVGYGLHG 403
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD---AFSVFSNMTERDLTSWDT 481
A +A+ H L+ L+ S + I K+ S D A VF ++ + W+
Sbjct: 31 ATHKAQLKQIHARLLVLGLQFSGFL-ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+I G+++N +DA+ ++S + A + PD F + ACS L + G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 230/403 (57%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG V+ ++++ + V L +Q I + TFS L++AC + ALE+ +H V ++
Sbjct: 216 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 275
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MY +C ++ A F + + +W+++++ F ++GLG+DA+ IF +
Sbjct: 276 DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFER 335
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+KP+ FI + + CS G V EG+ +F SM K YG+VP +HY ++D+LG G
Sbjct: 336 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 395
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA EFI +MP EP+ W + CR+HG+ E+G AE + +L+P N + L
Sbjct: 396 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK--NSGALVLL 453
Query: 622 VPVNASELAKEKEN-----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+E E KKL + ++V K H + A D SHP IY +
Sbjct: 454 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKL 513
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L Q+K AGY+P T V D+D KE+ L HSER+AV+ L+S P PI + KNL
Sbjct: 514 DTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 573
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA+K ISK+ GR++I+RD RFHHF DG CSC DYW
Sbjct: 574 RVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG K G+ +EA+ + + +++D + ACG KA + ++VH V +L
Sbjct: 113 MIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG 172
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N + MYS+ M+ A +VF +E R++ S+ +I G+ + E + +F
Sbjct: 173 FESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 232
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ ++ G++P++ F + AC+ + +G LH + M ++ P + +VDM G
Sbjct: 233 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYG 290
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G L++A++ +++ +P W L+++ HG LG +I E++
Sbjct: 291 KCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHG---LGKDAIKIFERM 336
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT---FSQLMQACGDAKALEEAKAVHEHVE 437
+ GL + K EAI + I ++PT FS ++AC ++E K +H
Sbjct: 12 MISGLSQNSKFSEAIRTFCGMR---ICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ + + + MYS+C +M DA VF M +D SW MI G++K G E+A+
Sbjct: 69 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSAL 524
F + + D + AC AL
Sbjct: 129 AFKKMIDEEVTIDQHVLCSTLGACGAL 155
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M +R+L SW MI+G ++N +A+ F + G P F AC++LG + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ +GI + ++ DM G + +A + E+MP + +V W +++
Sbjct: 61 K-QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMID 115
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 228/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G E++ + + ++ + D ++ AC A+ +A+ + ++++R
Sbjct: 908 MIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 967
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ M+++C ++ A +F M E+++ SW MI + +G G A+D+F
Sbjct: 968 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 1027
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G+ P+ + + ACS G V EG+ F M +DY + +KHY +VD+LG
Sbjct: 1028 MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRA 1087
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEAL+ I M E D +W + CR H ++ L ++ A + +L P
Sbjct: 1088 GRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLS 1147
Query: 621 LVPVNAS---------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA +L ++ KK+ +EV +K H++ GDT+HP + +IY +++
Sbjct: 1148 NIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 1207
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +++ GY+P+T FVLHD+D+E K L HSE+LA++ GL+++P PIRI+KNLR
Sbjct: 1208 SLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 1267
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ K++S I GR +I+RDA RFHHFK+G CSC DYW
Sbjct: 1268 VCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 194/360 (53%), Gaps = 9/360 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + GK E++ + + ++ + D ++ AC A+ +A+ + ++++R
Sbjct: 232 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 291
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY++C ++ A +F M E+++ SW MI + +G G A+D+F
Sbjct: 292 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 351
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+G+ PD + ACS G V EG+ F SM +DY + +KHY +VD+LG
Sbjct: 352 MMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRA 411
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEAL+ I+ M +E D +W + CR H ++ L ++ A + +L
Sbjct: 412 GRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLS 471
Query: 621 LVPVNA---------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ NA +L ++ KK +EV +K H++ GDT+HP + +IY +++
Sbjct: 472 NIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 531
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +++ GY+P+T FVLHD+D+E K L HSE+LA++ GL+++P PIRI+KNLR
Sbjct: 532 SLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC D K L+ + +H V + L ++ MY +C ++DA +F M
Sbjct: 162 TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM 221
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ERDL +W MI G+A+ G +++ +F + ++ G+ PD + V AC+ L G
Sbjct: 222 QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL-----GA 276
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + DY + V +++DM G ++ A E ++M E +V W ++
Sbjct: 277 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIA 335
Query: 588 LCRMHG 593
HG
Sbjct: 336 AYGYHG 341
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC D K L+ + +H V + L ++ MY +C ++DA +F M
Sbjct: 838 TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM 897
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ERDL +W MI G+A+ G +++ +F + ++ G+ PD + V AC+ L G
Sbjct: 898 XERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL-----GA 952
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H DY + V +++DM G ++ A E ++M E +V W ++
Sbjct: 953 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIA 1011
Query: 588 LCRMHG 593
HG
Sbjct: 1012 AYGYHG 1017
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 426 LEEAKAVHEH--VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
L + + VH V +L L V+ N ++ YS ++DDA+ +F M RD SW M+
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVA--NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
GFAK G + F + + G +PD+ V AC L ++ G L + K +G+
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYK-FGL 867
Query: 544 VPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ H+V ++VDM G +++A +KM E D+ W ++
Sbjct: 868 --DLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMI 909
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 417 MQACGDAKALEEAKAVHEH--VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+ A + + L + + VH V +L + V+ N ++ YS ++DDA+ +F M R
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVA--NKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQ---AGLKPDDQIFIGVFSACSALGDVVEGM 531
D SW M+ GFAK G D ++ F F++ G +PD+ V AC L ++ G
Sbjct: 124 DSVSWSVMVGGFAKVG---DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGR 180
Query: 532 LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
L + K +G+ + H+V ++VDM +++A +KM E D+ W ++
Sbjct: 181 LIHHIVYK-FGL--DLDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMI 233
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 242/400 (60%), Gaps = 12/400 (3%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + + EA+ + L++ + T ++ +C +L+ + +HE+V++
Sbjct: 188 LARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRY 247
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ MY++C S+DDA +VF +M +RD +W +I +A +G G A+ + ++ K+
Sbjct: 248 VKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKK 307
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++PD+ F+G+ ACS G V EG +F M+ +YGIVPS+KHY +VD+LG G LD
Sbjct: 308 EKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLD 367
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKS 617
EA +FI+++P++P +W L++ C HGN+E+G R E + +LD S N +
Sbjct: 368 EAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCA 427
Query: 618 KAGLVPVNASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ G + + L K +K K+ + +EV + VHE+ AG+ H + ++ + L
Sbjct: 428 RYGKWD-DVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELV 486
Query: 675 AQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++K AGY+P+T V + D++ E KE L HSE+LA++ GLL++P IR++KNLRVC
Sbjct: 487 KELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 546
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K IS I GR++I+RD +RFHHFKDG CSC DYW
Sbjct: 547 GDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F + ++ KAL E K +H +L + ++ MY+ C +D + VF +
Sbjct: 115 FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKID 174
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
E + +++ +I A+N +A+ +F + ++ GLKP D + V S+C+ LG + G
Sbjct: 175 EPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
E + K YG +K +++DM G LD+A+ MP + D W ++ H
Sbjct: 235 MHEYVKK-YGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP-KRDTQAWSAIIVAYATH 292
Query: 593 GN 594
G+
Sbjct: 293 GD 294
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 230/403 (57%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG V+ ++++ + V L +Q I + TFS L++AC + ALE+ +H V ++
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 340
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MY +C ++ A F + + +W+++++ F ++GLG+DA+ IF +
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFER 400
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+KP+ FI + + CS G V EG+ +F SM K YG+VP +HY ++D+LG G
Sbjct: 401 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 460
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA EFI +MP EP+ W + CR+HG+ E+G AE + +L+P N + L
Sbjct: 461 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK--NSGALVLL 518
Query: 622 VPVNASELAKEKEN-----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+E E KKL + ++V K H + A D SHP IY +
Sbjct: 519 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKL 578
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L Q+K AGY+P T V D+D KE+ L HSER+AV+ L+S P PI + KNL
Sbjct: 579 DTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 638
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA+K ISK+ GR++I+RD RFHHF DG CSC DYW
Sbjct: 639 RVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG K G+ +EA+ + + +++D + ACG KA + ++VH V +L
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG 237
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N + MYS+ M+ A +VF +E R++ S+ +I G+ + E + +F
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVDM 556
+ ++ G++P++ F + AC+ + +G LH + M ++ P +VS +VDM
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP----FVSSILVDM 353
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G G L++A++ +++ +P W L+++ HG LG +I E++
Sbjct: 354 YGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHG---LGKDAIKIFERM 401
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
D + ++Q K L K +H + +P T N ++ MYS+C +D A +
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLT-NHLVNMYSKCGELDHALKL 62
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M +R+L SW MI+G ++N +A+ F + G P F AC++LG +
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ +GI + ++ DM G + +A + E+MP + +V W +++
Sbjct: 123 EMGK-QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMID 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT---FSQLMQACGDAKALEEAKAVHEHVE 437
+ GL + K EAI + I ++PT FS ++AC ++E K +H
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMR---ICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ + + + MYS+C +M DA VF M +D SW MI G++K G E+A+
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSAL 524
F + + D + AC AL
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGAL 220
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 264/466 (56%), Gaps = 31/466 (6%)
Query: 327 SRRQYQQNPNEGQYQ---SYSGNIQNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQ 381
+R+ + +PN Y SG + G M A Q+ + +D + +
Sbjct: 156 ARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT----------M 205
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G EA+++ + + +S + T + + AC + AL++ + +H ++++
Sbjct: 206 ISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNI 265
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ G++ MY++C ++ A +F++ +R + W+ MI GFA +G ++A+++F
Sbjct: 266 QMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVF 325
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q K + P+ F+ + +ACS V EG +FESM+ Y + P ++HY +VD+LG
Sbjct: 326 EQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGR 385
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------ 613
G L EA E I M + PDV +W L++ C++H + E+G+R +IV++LDP+ L
Sbjct: 386 AGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLL 445
Query: 614 -NEKSKAGLVPVNASELAKEKE----NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
N S G N + +EK KK + +E+ H++ GD SHP+T ++Y
Sbjct: 446 ANIYSLTG--NWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYL 503
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQ-EGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + ++K AGYIPE+ VL DID E +E ALL HSE+LA++ GL+++ + PIRI+
Sbjct: 504 FLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIV 563
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH A+K ISK+ RE+I+RD R+HHFKDG CSC DYW
Sbjct: 564 KNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 96/247 (38%), Gaps = 36/247 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+F+ + CG + E + V H +L + N ++ MY D + DA VF
Sbjct: 104 SFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWS 163
Query: 472 TERDLTSWDTMITGFAKNGLGE-------------------------------DAVDIFS 500
RD+ SW+ M++G+A+ G + +A+DIF
Sbjct: 164 PNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFH 223
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+ P++ +AC+ L + +G + K+ I + + ++DM
Sbjct: 224 NMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKN-NIQMNERLLAGLIDMYAKC 282
Query: 561 GYLDEALEFIEKMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L+ A + P ++ V W ++ +HG E+ EQ+ +++
Sbjct: 283 GELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGK---SKEAIEVFEQMKIEKVSPNKVT 339
Query: 620 GLVPVNA 626
+ +NA
Sbjct: 340 FVALLNA 346
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 227/366 (62%), Gaps = 9/366 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC AL+ K +H + R + + N + MY++C + +A VF M
Sbjct: 293 TLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM 352
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ERD+ SW +I G A G +A + F++ + GL+P+D F+G+ +AC+ G V +G+
Sbjct: 353 HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGL 412
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M + YGI P ++HY +VD+L G LD+A I MPM+P+V VW L+ CR+
Sbjct: 413 EYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRI 472
Query: 592 HGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVPVNASELAKEKENKKLASQ--N 642
+ + E G+R + +LD + N + G + AS + ++NK + + +
Sbjct: 473 YKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCS 532
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ + V+E+ GD+SHP++ +IY++IR L+ +MK AGY P+T V+H+ID+E KE+AL
Sbjct: 533 WIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDAL 592
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+++ IRI+KNLRVC DCH A+KIISKIV RE+++RD RFHHF
Sbjct: 593 STHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHF 652
Query: 763 KDGLCS 768
KDG CS
Sbjct: 653 KDGKCS 658
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 8/181 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK- 503
+ +++ ++ Y+ ++++A +F NM R++ SW+ MI G+A+N DA+++F Q +
Sbjct: 224 LVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQH 283
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ GL P+D + V SAC+ LG + G + ++ I + ++ DM G +
Sbjct: 284 EGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN-KIEVGLFLGNALADMYAKCGCV 342
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL-ELGDRCAEIVEQ-LDPSRLNEKSKAGL 621
EA +M E DV W ++ M+G E + AE++E L+P N+ S GL
Sbjct: 343 LEAKGVFHEMH-ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEP---NDISFMGL 398
Query: 622 V 622
+
Sbjct: 399 L 399
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ +++AC + E + VH V + + N ++ +Y + A +F M
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+T+I+G+ +G+ + A +F + L + + S + +G++ E
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVS----WSTMISGYARVGNLEEAR 244
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD-----EALEFIEKMPME----PDVDVW 582
FE+M M++ VS M+ GY +A+E +M E P+
Sbjct: 245 QLFENM--------PMRNVVSWNAMIA--GYAQNEKYADAIELFRQMQHEGGLAPNDVTL 294
Query: 583 EKLMNLCRMHGNLELG 598
+++ C G L+LG
Sbjct: 295 VSVLSACAHLGALDLG 310
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 229/394 (58%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++ +++ L+++ I+ D T L++AC D +A+++H ++ R +
Sbjct: 321 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 380
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L +Y++ ++ + +F + +RD +W M+ G+A + G +A+ +F + G++
Sbjct: 381 TALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 440
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F + SACS G V EG +FE MS+ Y + P + HY +VD+LG +G L++A E
Sbjct: 441 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 500
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGL 621
I+ MPMEP VW L+ CR++GN+ELG AE + LDPS N S AGL
Sbjct: 501 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 560
Query: 622 --VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L KE+ + + +E +K+H + GD HP +D+I+ + L ++ E
Sbjct: 561 WRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXE 620
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG P+T FVLHDID+E K + + HSE+LA++ GLL + + P+ I KNLR+CGDCHS
Sbjct: 621 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 680
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K S + R +IIRD+KRFHHF DGLCSCRDYW
Sbjct: 681 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC AL+E K++H V +L + N ++ MY + +D A +F M
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 302
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
R L SW++M+ NG E +D+F+ K+AG+ PD + + AC+ G
Sbjct: 303 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 356
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+ A ++ A+H V + L+ + ++ MY + +DA +F M RD
Sbjct: 145 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRD 204
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
L SW+++++G + G ++ F + + ++G +P++ + V SAC+ +G + EG
Sbjct: 205 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGK-SL 263
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ G+ K S+++M G G+LD A + E+MP+ V W ++ + +G
Sbjct: 264 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMVVIHNHNGY 322
Query: 595 LELG 598
E G
Sbjct: 323 AEKG 326
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
+D E + L G +EAI++ L+ K+ + VD TF+ L+ AC +
Sbjct: 397 EDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHS 456
Query: 424 KALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+EE K E + + + P R+ Y+ ++ + ++DA+ + +M
Sbjct: 457 GLVEEGKKYFEIMSEVYRVEP-RLDHYSCMVDLLGRSGRLEDAYELIKSM 505
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 229/373 (61%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ +++AC + + + K VH + + + + ++ MYS+ M A VF M
Sbjct: 265 TYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGM 324
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ DL SW MI+G+A+NG ++A+ F ++G +PD F+GV SAC+ G V +G+
Sbjct: 325 PKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGL 384
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F S+ +YGI + HY ++D+L +G + A E I M ++P+ +W L+ CR+
Sbjct: 385 SIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRI 444
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-LAKEKENK----------KLAS 640
H N+ L AE + +++P N + L + AS L E EN K+ +
Sbjct: 445 HKNVRLARWAAEALFEIEPE--NPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPA 502
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +EV +++H + GD HP+ +++YAL++ L +M+E GY+ +T FVLHD++ E K++
Sbjct: 503 SSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQ 562
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+ HSERLAV+ G++++P API++ KNLR+CGDCH+ +K+ISKIV RE+I+RD+ RFH
Sbjct: 563 DIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFH 622
Query: 761 HFKDGLCSCRDYW 773
HFK+G CSCRDYW
Sbjct: 623 HFKNGSCSCRDYW 635
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+ +H HV R ++ + MY++C +DDA SVF M RD+ SW M+ +
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDA 241
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIV 544
+ +F + ++G++P++ + GV AC+ LG V G + +S + D
Sbjct: 242 RRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMT-KSRAGDSCFA 300
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S ++V M G + A+ MP + D+ W +++
Sbjct: 301 ES-----ALVHMYSKYGDMGTAVRVFRGMP-KLDLVSWTAMIS 337
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 230/394 (58%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++ +++ L+++ I+ D T L++AC D +A+++H ++ R +
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L +Y++ ++ + +F + +RD +W M+ G+A + G +A+ +F + G++
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 363
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F + SACS G V EG +FE MS+ Y + P + HY +VD+LG +G L++A E
Sbjct: 364 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 423
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGL 621
I+ MPMEP VW L+ CR++GN+ELG AE + LDPS N S AGL
Sbjct: 424 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 483
Query: 622 V--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L KE+ + + +E +K+H + GD HP +D+I+ + L +++E
Sbjct: 484 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 543
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG P+T FVLHDID+E K + + HSE+LA++ GLL + + P+ I KNLR+CGDCHS
Sbjct: 544 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHST 603
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K S + R +IIRD+KRFHHF DGLCSCRDYW
Sbjct: 604 AKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC D AL+E K++H V +L + N ++ MY + +D A +F M
Sbjct: 166 TLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
R L SW++M+ NG E +D+F+ K+AG+ PD + + AC+ G
Sbjct: 226 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 279
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+ A ++ A+H V + L+ + ++ MY + +DA +F M +D
Sbjct: 68 LVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 127
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
L SW+++++G + G ++ F + + ++G +P++ + V SAC+ +G + EG
Sbjct: 128 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGK-SL 186
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ G+ K S+++M G G+LD A + E+MP+ V W ++ + +G
Sbjct: 187 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMVVIHNHNGY 245
Query: 595 LELG 598
E G
Sbjct: 246 AEKG 249
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 363 EDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD 422
ED F E + T L G +EAI++ L+ K+ + VD TF+ L+ AC
Sbjct: 320 EDIFEEIKDRDRIAWT-AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 378
Query: 423 AKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ +EE K E + + + P R+ Y+ ++ + ++DA+ + +M
Sbjct: 379 SGLVEEGKKYFEIMSEVYRVEP-RLDHYSCMVDLLGRSGRLEDAYELIKSM 428
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V GK KEA+ + ++ I +D +QAC D L++ K +H ++++
Sbjct: 221 MISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK-- 278
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ + G ++ MY++C +++A VF M E+ ++ W MI+G+A +G G +A++
Sbjct: 279 HEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEW 338
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + AG++P+ F G+ +ACS G V E L FESM + +G PS++HY +VD+LG
Sbjct: 339 FMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLG 398
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L EA E IE MP++P+ +W L+N C +HGNLELG + +I+ Q+DP
Sbjct: 399 RAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH 458
Query: 619 AGLVPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ A E KE+ KL +++ V HE+ AGD SHP+ +I +
Sbjct: 459 LASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHM 518
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++E GY P+ +L D++ + KE A+ HSE+LAV+ GL+S+ IRI+KN
Sbjct: 519 LEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKN 578
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+ +K+ISK+ RE+++RD RFH FKDG C+C DYW
Sbjct: 579 LRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC A EE + +H H+ ++ + T N +L +YS+ + A +F +
Sbjct: 120 TFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 472 TERDLTSWDTMITGFAKNGLGE-------------------------------DAVDIFS 500
+RD SW++MI G+ K G E +A+++F
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + AG+K D+ + AC+ LG + +G +H + I P + ++DM
Sbjct: 240 RMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG--CVLIDMYAK 297
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+EA+E KM E V VW +++ +HG
Sbjct: 298 CGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHG 330
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/404 (38%), Positives = 237/404 (58%), Gaps = 12/404 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK EA V + ++ + + P S ++ AC + A + VH V L
Sbjct: 209 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 268
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY++C + A +FS M RD+ SW ++I G A++G E A+ ++
Sbjct: 269 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+KP++ F+G+ ACS +G V +G F+SM+KDYGI PS++HY ++D+LG +
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE-IVEQL---DPSR---L 613
G LDEA I MP PD W L++ C+ G ++G R A+ +V DPS L
Sbjct: 389 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 614 NEKSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ + + SE + E E +K + +EVR + + AG+TSHP + I+ L+
Sbjct: 449 SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508
Query: 671 RGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +M+ GY+P+T ++LHD+D++ KE+ L HSER AV++GLL + PIRI+KN
Sbjct: 509 KKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 568
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH LK IS+I RE+I+RDA R+HHFK G CSC D+W
Sbjct: 569 LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+P + +Q C + L AKA+H H+ +L N ++ +Y +C + A VF
Sbjct: 3 IPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFD 62
Query: 470 NMTERDLTSWDTMITGFAKNGL-GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M RD +W +++T + L G+ S +GL+PDD +F + AC+ LG +
Sbjct: 63 EMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 529 EG-MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEA 566
G +H + +Y +V S S+VDM G L+ A
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKS-----SLVDMYAKCGLLNSA 159
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-------NGILKMYSECDSMDDA 464
FS L++AC + +++ + VH H VS Y + ++ MY++C ++ A
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCH-------FIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+VF ++ ++ SW M++G+AK+G E+A+++F
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 240/409 (58%), Gaps = 22/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--- 437
+DG + G+ EA+ + + + D T ++ A +E K +H +V+
Sbjct: 490 MIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSR 549
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
R+ +RV T ++ MY +C S+ DA VF + ++D+ W+ MI G+A +G A++
Sbjct: 550 RVQLSVRVGT--ALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALE 607
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F Q ++ GL P D FIG+ +ACS G V EG F+SM ++YGI P ++HY +VD+L
Sbjct: 608 MFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLL 667
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRL-- 613
G G + EA ++ M + PD +W L+ CR+H N+ LG + A+ + + L S +
Sbjct: 668 GRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYI 727
Query: 614 ---NEKSKAGLVPVNASELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETD 664
N + G N E+A+ + K + + +E+ +V+E+ AGD SHP TD
Sbjct: 728 LLSNIYAAVG----NWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTD 783
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY ++ + +KE G++P+T VLHD+D+ KE+AL HSE+LA++ GL+S+ A I
Sbjct: 784 EIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATI 843
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+I+KNLR C DCH+ LK+IS+I GR+++ RD RFHHF DG CSC DYW
Sbjct: 844 KIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 1/167 (0%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
+A A + +L V + +L Y++ ++DDA S+F + +D W+ MI G+
Sbjct: 436 DATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYT 495
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
++G +A+ +F + +G++PD+ + V SA + LG V G + + S+
Sbjct: 496 QHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSV 555
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ +++DM G L +A++ + + D+ VW ++N MHG+
Sbjct: 556 RVGTALIDMYCKCGSLGDAVDVFHGIG-DKDIVVWNAMINGYAMHGD 601
>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
Length = 521
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 214/372 (57%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+ ++ +C + AL+ ++VH L L P R S N ++ MY++ ++ DA +VF
Sbjct: 151 AVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFR-SVGNSLVSMYAKTGALHDARAVFDA 209
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M R +W +I G+A+NG G ++++++ ++G +PD FIG+ ACS G V G
Sbjct: 210 MPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFACSHAGLVDAG 269
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
HF SM+ DYGI P HY +VD+LG G LDEA++ + + E D VW+ L+ CR
Sbjct: 270 RDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATVWKSLLGACR 329
Query: 591 MHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQ 641
+H N EL +R AE+V +LDP S L +++ L K + K
Sbjct: 330 VHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALMKARGITKEPGC 389
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ + V H + D HP +IY + + +++ GY+P+T + L D EG+E
Sbjct: 390 SWVGVNGVTHLFHVEDRGHPRAAEIYRKVEEMTERIRAEGYVPDTDWALQDEAPEGRERG 449
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSERLAV+ GLL+ PA APIR+ KNLRVCGDCH+A+K+++K GR +I+RDA FHH
Sbjct: 450 LAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKMVAKAYGRVIILRDANCFHH 509
Query: 762 FKDGLCSCRDYW 773
KDG CSC DYW
Sbjct: 510 MKDGECSCGDYW 521
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +VF M RD+ +W +++TG A+ G AV + AG++ D+ V S+C+
Sbjct: 102 ARAVFDEMPRRDVVTWTSLLTGLARAGAHAAAVRAYHGMVAAGVQTDEFAVAAVLSSCAG 161
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ G + + G+ P S+V M TG L +A + MP + W
Sbjct: 162 STALDVGR-SVHAAAVHLGLCPFRSVGNSLVSMYAKTGALHDARAVFDAMPARCTI-TWT 219
Query: 584 KLM 586
L+
Sbjct: 220 ALI 222
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 237/404 (58%), Gaps = 14/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G G +EAI++ + + I VD T + A +LE A+ + ++ +
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK-- 315
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S R T+ G++ MY++C S+ A VF + ++D+ W MI G+ +G G++A+ +
Sbjct: 316 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 375
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+++ KQAG+ P+D FIG+ +AC G V EG F M D+GI P +HY +VD+LG
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLG 434
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
GYL++A +FI MP++P V VW L++ C++H + LG+ AE + LDP
Sbjct: 435 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 494
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
S L + N + +K K + +E+ + ++ GD SHP++ +I+
Sbjct: 495 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 554
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++K AGY+P VLHD++ E EE L HSERLAV++G++S+ +RI KN
Sbjct: 555 LDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKN 614
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR C +CHSA+K+ISK+V RE+IIRDAKRFHHFKDG+CSC D+W
Sbjct: 615 LRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++ACG K +H + V N ++ MY++ + A VF +
Sbjct: 87 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+R + SW ++I+G+ +NG +A+++F + +Q +KPD + V +A + + D+ +G
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G+ +S+ M G ++ A F +M +P++ +W +++
Sbjct: 207 -SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMIS 260
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G EA+ V + + + D +M A + + L + K++H V +L
Sbjct: 158 ISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGL 217
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ MY++ ++ A F+ M + +L W+ MI+G+A NG GE+A+ +F +
Sbjct: 218 EFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFRE 277
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++ D A + +G + ++G + +S +D V + ++DM
Sbjct: 278 MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYIS-KSEYRDDTFVNT-----GLIDM 331
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G + A +++ + DV +W ++ +HG+
Sbjct: 332 YAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 368
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 248/432 (57%), Gaps = 17/432 (3%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
++V ++C+ E S N+ + G V+ G E + + I +
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNS----IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYS 342
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS +M AC L K +H ++ R + + ++ MY++C ++ A +F M
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD+ SW MI G A +G DA+++F Q + G+KP+ F+ V +ACS G V E
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWK 462
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+F SM++D+GI P ++HY ++ D+LG G L+EA +FI M + P +W L++ CR+H
Sbjct: 463 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 522
Query: 593 GNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLASQ 641
N+++ ++ A + ++DP+ N + L + ++ E AK + + +K +
Sbjct: 523 XNIDMAEKVANRILEVDPN--NTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 580
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +EV++KV+ + AGD SHP +KI + L M++ GY+P+T V HD+++E K+
Sbjct: 581 SWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYL 640
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
+ +HSERLA+ G++++PA IR+ KNLRVC DCH+A K ISKIVGRE+++RD RFHH
Sbjct: 641 VCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHH 700
Query: 762 FKDGLCSCRDYW 773
FK+G CSC DYW
Sbjct: 701 FKNGTCSCGDYW 712
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY++C + D+ VF+ +TERD SW+++I G +NGL ++ + F Q
Sbjct: 274 IYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM 333
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A +KP F + AC+ L + G ++++ G ++ S+VDM G +
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIR 392
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
A + ++M + D+ W ++ C +HG E+ EQ++ + A + +
Sbjct: 393 TAKQIFDRMRLR-DMVSWTAMIMGCALHGQ---APDAIELFEQMETEGIKPNHVAFMAVL 448
Query: 625 NA 626
A
Sbjct: 449 TA 450
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 37/238 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC------------- 458
F ++++C L +++H ++ R+ + T N ++ MYS+
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167
Query: 459 ----DSM---------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
D M D +F M E+DL SW+T+I G A+NGL E+ + +
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ A LKPD V + D+ G S G+ + S++DM
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGK-EIHGCSIRQGLDADIYVASSLIDMYAK 286
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
+ ++ + + E D W ++ C +G + G R Q+ +++ KS
Sbjct: 287 CTRVADSCR-VFTLLTERDGISWNSIIAGCVQNGLFDEGLR---FFRQMLMAKIKPKS 340
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+YS + + D+ +F+ + +W ++I + +GL ++ F +GL PD +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 514 FIGVFSACSALGDV 527
F V +C+ L D+
Sbjct: 109 FPSVLKSCALLMDL 122
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 237/404 (58%), Gaps = 14/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G G +EAI++ + + I VD T + A +LE A+ + ++ +
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK-- 330
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S R T+ G++ MY++C S+ A VF + ++D+ W MI G+ +G G++A+ +
Sbjct: 331 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 390
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+++ KQAG+ P+D FIG+ +AC G V EG F M D+GI P +HY +VD+LG
Sbjct: 391 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLG 449
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
GYL++A +FI MP++P V VW L++ C++H + LG+ AE + LDP
Sbjct: 450 RAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQ 509
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
S L + N + +K K + +E+ + ++ GD SHP++ +I+
Sbjct: 510 LSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEE 569
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++K AGY+P VLHD++ E EE L HSERLAV++G++S+ +RI KN
Sbjct: 570 LDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKN 629
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR C +CHSA+K+ISK+V RE+IIRDAKRFHHFKDG+CSC D+W
Sbjct: 630 LRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++ACG K +H + V N ++ MY++ + A VF +
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+R + SW ++I+G+ +NG +A+++F + +Q +KPD + V +A + + D+ +G
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G+ +S+ M G ++ A F +M +P++ +W +++
Sbjct: 222 -SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRME-KPNLILWNAMIS 275
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G EA+ V + + + D +M A + + L + K++H V +L
Sbjct: 173 ISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGL 232
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ MY++ ++ A F+ M + +L W+ MI+G+A NG GE+A+ +F +
Sbjct: 233 EFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFRE 292
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++ D A + +G + ++G + +S +D V + ++DM
Sbjct: 293 MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYIS-KSEYRDDTFVNT-----GLIDM 346
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G + A +++ + DV +W ++ +HG+
Sbjct: 347 YAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGH 383
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 226/395 (57%), Gaps = 14/395 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ +E D + + ++ ACGD AL K +H ++ER + N ++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C ++ A VF NM RD+ SW MI+ + +G G DAV +FS+ + +GL PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ +ACS G + EG F+ M+ Y I P ++H +VD+LG G + EA FI+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--P 623
M MEP+ VW L+ CR+H + ++G A+ + QL P + N +KAG
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
N + K K KK + +EV +H + GD SHP++D+IY + L +MKE GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP-----ARAPIRIMKNLRVCGDCHS 738
P++ LHD+++E KE L HSE+LA+ L+++ + IRI KNLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A K+IS+I RE+IIRD RFH F+ G+CSC DYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 8/237 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G E ++V G + + D TF +++AC + + + +H ++ +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
NG++ MY +C + +A V M+ RD+ SW++++ G+A+N +DA+++ + +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ D + A S E +++ + M G S+ + ++ + E
Sbjct: 236 KISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVE 292
Query: 566 ALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
A+E +M EPD ++ C L LG + +E +L P+ L E +
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI--LKMYSECDSMDDAFSVFSN 470
Q++ D + L + VH + +L LR ++ G+ ++ Y+ + A VF
Sbjct: 45 LGQVLDTYPDIRTL---RTVHSRI--ILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ ER++ + MI + NG + V +F ++PD F V ACS G +V G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
S +K G+ ++ +V M G G+L EA +++M DV W L+
Sbjct: 160 RKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 234/402 (58%), Gaps = 10/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV++ ++AIE+ ++ + I D T + ACG A E AK VH ++E+
Sbjct: 436 MISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNG 495
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P + ++ M++ C A VF+ MTERD+++W I A G GE A +F+
Sbjct: 496 IPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFN 555
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q G+KPD +F+ V +ACS G V +G LH S+ +D+GI P ++HY +VD+LG
Sbjct: 556 QMLIQGVKPDVVLFVQVLTACSHGGQVEQG-LHIFSLMEDHGISPQIEHYGCMVDLLGRA 614
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G L EA + I+ MPMEP+ VW L+ CR+H N+E+ AE + +L P R
Sbjct: 615 GLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLS 674
Query: 614 NEKSKAG-LVPVNASEL-AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + AG V L +EK +K+ + ++V +HE+ +GD SHPE I +++
Sbjct: 675 NIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQ 734
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ + +AG+IP+ VL D+D++ KE L HSE+LA++ GL+++ PIR++KNLR
Sbjct: 735 EMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLR 794
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCHS K+ S I RE+I+RD RFH F+ GLCSC DYW
Sbjct: 795 MCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ C A E VH V ++ V N ++ Y+EC MD VF M
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ER++ SW ++I G+A+ ++AV +F + +AG++P + V SAC+ L D+ G
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGE 252
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + G+ + ++VDM G +D A
Sbjct: 253 -RVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAA 286
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S V ++N + + ++ A+ VF+ + ER+ W+TMI+G + L EDA+++
Sbjct: 393 LMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIEL 452
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + G+K D +G+ SAC LG E + + GI M+ ++VDM
Sbjct: 453 FREMQGEGIKADRVTMMGIASACGYLG-APELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G A++ KM E DV W + M GN
Sbjct: 512 RCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGN 546
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + + KEA+ + + + I T ++ AC + L+ + V ++ L L
Sbjct: 206 GYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKL 265
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ MY +C ++D A +F +R+L ++T+++ +A+ GL +A+ I +
Sbjct: 266 NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEML 325
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG 530
Q G +PD + SA + L D+ G
Sbjct: 326 QQGPRPDRVTMLSAISASAQLVDLFYG 352
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 459 DSMDDAFSVFSNMTERD--LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
D AF +F D L +++I G++ GLG +A+ ++ + G+ P+ F
Sbjct: 77 DYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPF 136
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V S C+ + EG+ S+ K G+ + ++ G++D + E M E
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVK-MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMS-E 194
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENK 636
+V W L +C GDR E V S E +AG+ P + + +
Sbjct: 195 RNVVSWTSL--IC----GYARGDRPKEAV-----SLFFEMVEAGIRPSSVTMVCVISACA 243
Query: 637 KL 638
KL
Sbjct: 244 KL 245
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 221/372 (59%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++A ALE +H + + N ++ MY++C ++DA F M
Sbjct: 441 TYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKM 500
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD SW+ MI G++ +G+ +A+++F + KP+ F+GV SACS G + +G
Sbjct: 501 NKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ 560
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
HFESMSKDY I P ++HY +V +LG G DEA++ I ++ +P V VW L+ C +
Sbjct: 561 AHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVI 620
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKENKKLASQ--- 641
H ++LG CA+ V +++P N + AG N + + K + KK+ +
Sbjct: 621 HKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWD-NVAFVRKYMQKKKVRKEPGL 679
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +E + VH + GDTSHP+ I A++ L + ++AGY+P+ VL D+ + KE
Sbjct: 680 SWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERH 739
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSERLA+++GL+ +P IRI+KNLR+C DCH+ +K+ISK+V RE++IRD RFHH
Sbjct: 740 LWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHH 799
Query: 762 FKDGLCSCRDYW 773
F+ G+CSC DYW
Sbjct: 800 FRHGVCSCGDYW 811
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ + + + + TF+ ++QAC + +L+ K +H V + V N I
Sbjct: 320 KEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAI 379
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y++C ++++ +F + +R+ +W+T+I G+ + G GE A+++F+ + ++P +
Sbjct: 380 MDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTE 439
Query: 512 QIFIGVFSACSALGDVVEGM----LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ V A ++L + G+ L ++M +V + S++DM G +++A
Sbjct: 440 VTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN-----SLIDMYAKCGRINDAR 494
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
+KM +V W ++ MHG
Sbjct: 495 LTFDKMNKRDEVS-WNAMICGYSMHG 519
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S +++C +A K+VH + + +L++Y++ + DA +F M
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ DL W MI +A++ ++A+D+F + +Q + P++ F V AC++ + G
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S +G+ ++ +I+D+ G ++ +++ E++P DV W ++
Sbjct: 359 -QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNTIIV---- 412
Query: 592 HGNLELGD 599
G ++LGD
Sbjct: 413 -GYVQLGD 419
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 28/222 (12%)
Query: 370 SRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA 429
SR Q + L + + KEG V L K +S+DL + AC
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPF-VFTTLLKLLVSMDLAHLCWTLHAC--------V 162
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+ H + + ++ YS ++D A VF ++ +D+ SW M+ +A+N
Sbjct: 163 YKLGHHADAFVG-------TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAEN 215
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIV 544
E+++ +F+Q + G KP++ G +C L G V G D +
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFV- 274
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++++++ +G + +A E+MP + D+ W ++
Sbjct: 275 -----GIALLELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMI 310
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 234/398 (58%), Gaps = 15/398 (3%)
Query: 389 GKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
GK EA+ V L+ Q I ++ T + AC ALE + +H ++++ +
Sbjct: 345 GKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYV 404
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ ++ MYS+C ++ A VF+++ +RD+ W MI G A +G G +AVD+F + ++A +
Sbjct: 405 TSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANV 464
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F VF ACS G V E F M YGIVP KHY IVD+LG +GYL++A+
Sbjct: 465 KPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAV 524
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV--- 624
+FIE MP+ P VW L+ C++H NL L + + +L+P N+ + L +
Sbjct: 525 KFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPR--NDGAHVLLSNIYAK 582
Query: 625 -----NASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
N SEL K L + + +E+ +HE+ +GD +HP ++K+Y + + +
Sbjct: 583 SGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 642
Query: 677 MKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K GY PE VL I ++E KE++L HSE+LA+ +GL+S+ A IR++KNLR+CGD
Sbjct: 643 LKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGD 702
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ K+IS++ RE+I+RD RFHHF++G CSC D+W
Sbjct: 703 CHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 38/247 (15%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V++G +A+E+ +E + + T ++ AC + LE + V ++E
Sbjct: 205 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENR 264
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA------------- 487
+ ++ N +L MY++C S++DA +F M E+D +W TM+ G+A
Sbjct: 265 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 324
Query: 488 ------------------KNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVV 528
+NG +A+ +F + + Q +K + + SAC+ +G +
Sbjct: 325 AMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALE 384
Query: 529 EGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G S K GI M YV+ ++ M G L++A E + + DV VW ++
Sbjct: 385 LGRW-IHSYIKKNGI--KMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMI 440
Query: 587 NLCRMHG 593
MHG
Sbjct: 441 GGLAMHG 447
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++A + +L +++H + V N ++ Y C +D A VF+ +
Sbjct: 135 TFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 194
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ SW++MI GF + G + A+++F + + +K +GV SAC+ + D+ G
Sbjct: 195 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGR 254
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S ++ + ++ +++DM G +++A + M E D W +++
Sbjct: 255 -RVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLD 308
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 235/398 (59%), Gaps = 17/398 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVS 446
G +EA+ V +++ I D T ++ +C + +LEE H V L+ + VS
Sbjct: 352 GCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVS 411
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ +Y +C S++DA +F M D SW ++TG+A+ G ++ +D+F +
Sbjct: 412 --NALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKD 469
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+KPD FIGV SACS G V +G +F SM KD+GIVP HY ++D+ +G L EA
Sbjct: 470 VKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEA 529
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
EFI++MPM PD W L++ CR+ G++E+G AE + ++DP N S L ++A
Sbjct: 530 EEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQ--NPASYVLLCSMHA 587
Query: 627 S-----ELA------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+ ++A ++++ KK + ++ ++KVH + A D SHP + IY + L +
Sbjct: 588 TKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNS 647
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+M E GY P+ VLHD+ K + HSE+LA++ GL+ P PIRI+KNLRVC D
Sbjct: 648 KMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVD 707
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K+ISKI GR++++RDA RFH F +G+CSC D+W
Sbjct: 708 CHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +A+ + Q I++D TF ++ ACG ALE+ K +H ++ R
Sbjct: 243 MVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTH 302
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C S+ A + F M+ +++ SW +I G+ +NG E+AV +FS
Sbjct: 303 YDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFS 362
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI----VDM 556
+ ++ G+ PDD V S+C+ L + EG F ++ +V + HY+++ V +
Sbjct: 363 EMQRDGIDPDDFTLGSVISSCANLASLEEGA-QFHCLA----LVSGLMHYITVSNALVTL 417
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G G +++A ++M V W L+
Sbjct: 418 YGKCGSIEDAHRLFDEMLFHDQVS-WTALVT 447
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ C +++A +F MT+RD +W TM+TGF +NGL A++ F + +
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ D F + +AC AL + +G
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQG 291
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
TYN +L + +DD S+F++M +RD S++ +I GF+ G AV ++ +AG
Sbjct: 74 TYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAG 133
Query: 507 --LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
++P + A SALGD G H + + +G+ + +V M G +
Sbjct: 134 SSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGS--PLVGMYAKMGLI 191
Query: 564 DEALEFIEKM 573
+A ++M
Sbjct: 192 GDAKRVFDEM 201
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 229/378 (60%), Gaps = 22/378 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T + ++ AC D +L+ K + E++ S +V T ++ M+S+C S+ A SVF
Sbjct: 87 TLATILSACADLGSLDMGKEIEEYILSNGFQSDRQVQT--SLIHMFSKCGSIGKAISVFE 144
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVV 528
++++DL +W +MI G+A +G+ E+A+ +F + + +KPD +F + ACS +G V
Sbjct: 145 RISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKEIKPDAVVFTSILLACSHVGLVE 204
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G+ F+SM KD+GIVPS++HY+ +VD+LG G + AL+ I MP++ VW ++
Sbjct: 205 DGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSA 264
Query: 589 CRMHGNLELGDRCAEIVEQLDP-SRLNEKSKAGLVPVNASELAKEKENKKLASQNL---- 643
C H NLELG+ A + ++P S N A L + + K KE S +
Sbjct: 265 CTKHCNLELGELAARKLLYMNPGSHANYVLMANLY----TSMGKWKEAAVTRSLMIDRGL 320
Query: 644 --------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+E+ VH + AGD SH ++ IY + + ++ EAGY+PET V+HD+++
Sbjct: 321 VKAPGWSQVEINGSVHVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLER 380
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KEEAL HSERLA++ GL+S+ A + +RIMKN R C DCHSALK ISKI GR LI+RD
Sbjct: 381 EEKEEALKVHSERLAIAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRD 440
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHF+ G C+C+D+W
Sbjct: 441 GSRFHHFESGKCTCKDFW 458
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L MY++C + A VF + + W ++I G+ G +A+ +F + + +K
Sbjct: 23 NLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTHMGYPAEALLLFKKLLKTAIK 82
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ + SAC+ LG + G E G + S++ M G + +A+
Sbjct: 83 PNGATLATILSACADLGSLDMGK-EIEEYILSNGFQSDRQVQTSLIHMFSKCGSIGKAIS 141
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
E++ + D+ W ++N +HG E
Sbjct: 142 VFERIS-DKDLAAWSSMINGYAIHGMAE 168
>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
Length = 520
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 222/402 (55%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
L GL + G A+ + + D + +C + AL+ ++VH RL L
Sbjct: 120 LTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGL 179
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R S N ++ MY++ ++ DA +VF M R +W +I G+A+NG G ++++++
Sbjct: 180 RPFR-SVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYA 238
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G +PD FIG+ ACS G V G HF SM YGI P HY +VD+LG
Sbjct: 239 DMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRA 298
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G LDEA++ + + E D VW+ L+ CR+H N EL +R AE+V +LDP S
Sbjct: 299 GRLDEAMDLLNRSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLS 358
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L +++ L K + K + + V H + D HP +IY +
Sbjct: 359 NLYSRARRWGDVARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVE 418
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++ GY+P+T + L D E ++ L HSERLAV+ GLL+ PA APIR+ KNLR
Sbjct: 419 EMTERIRVEGYVPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLR 478
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A+K+++K+ GRE+I+RDA FHH KDG CSC DYW
Sbjct: 479 VCGDCHTAIKMVAKVYGREIILRDANCFHHMKDGECSCGDYW 520
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M RD+ +W +++TG A+ G AV + +G++PD+ S+C+A
Sbjct: 104 VFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTA 163
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + + G+ P S+V M TG L +A + MP + W L+
Sbjct: 164 LDLGR-SVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDARAVFDAMPARCTI-TWTALI 221
>gi|326532424|dbj|BAK05141.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 230/398 (57%), Gaps = 11/398 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLR 444
V+ G A V ++ + D+ T L+ AC AL+ K H V R ++P
Sbjct: 17 VQNGMADAAFLVFRKMQVCNVEPDVATMVSLIPACAHLAALQHGKCSHGSVIVRGMAP-E 75
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
S N ++ MY++C + + +F M RD+ SW+TMI G+ +GLG++A +F K
Sbjct: 76 TSICNALIDMYAKCGRIAFSRQIFDAMPSRDIVSWNTMIAGYGIHGLGKEATALFLDMKN 135
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+PD FI + SACS G V EG F M++ YGI P M+HY+S+VD+L G+LD
Sbjct: 136 HACEPDGVTFICLISACSHSGLVTEGKHWFHMMAQKYGITPRMEHYISMVDLLARGGFLD 195
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKS 617
EA +FI+ MPM+ DV VW L+ CR+H N++LG + A ++++L P N S
Sbjct: 196 EAYQFIQSMPMKADVRVWGALLAACRVHKNIDLGKQVARVIQKLGPEGTGNFVLLSNIFS 255
Query: 618 KAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
AG + KEK KK + +E+ +H + GD SHP + +IY + +
Sbjct: 256 AAGRFDEAAEVRIIQKEKGFKKSPGCSWIEINGSLHAFIGGDRSHPRSPEIYQELHNILV 315
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+ + GY +T FVL D+++E KE+ALL HSE+LA++ G+L+ I + KNLRVCGD
Sbjct: 316 DINKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGILTLSEDKDIFVTKNLRVCGD 375
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K +S + R++I+RDA RFHHFK+G CSC D+W
Sbjct: 376 CHTVIKYMSLVRRRDIIVRDANRFHHFKNGQCSCGDFW 413
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 233/407 (57%), Gaps = 19/407 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ + + + K+ + +FS ++ AC AL K +H ++ RL
Sbjct: 272 IAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGF 331
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ +L MY++C ++ A +F+ M +RD+ SW +I G A +G DAV +F
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ G+KP F+ V +ACS G V EG +F SM +D+G+ P ++HY ++ D+LG
Sbjct: 392 EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGR 451
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L+EA +FI M EP VW L+ CR H N+EL ++ + +DP + A
Sbjct: 452 AGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMG----A 507
Query: 620 GLVPVNASELAKEKEN-------------KKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
++ N A+ + KK + + +EV +KVH + AGD SHP DKI
Sbjct: 508 HVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKI 567
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
+ L QM++ GY+ +T VLHD+D+E K + L HSERLA++ G++S+ + IR+
Sbjct: 568 NEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRV 627
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KN+RVC DCH+A+K ++KIVGRE+I+RD RFHHFK+G CSC DYW
Sbjct: 628 IKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ ++ + K+ + D T S ++ + + + K +H + R
Sbjct: 171 IAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGF 230
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY++C ++ + F ++ RD SW+++I G +NG + + F +
Sbjct: 231 DKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRR 290
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMS---KDYGIVPSMKHYVSIVDML 557
+ +KP F V AC+ L + G LH + D + S S++DM
Sbjct: 291 MLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS-----SLLDMY 345
Query: 558 GSTGYLDEALEFIEKMPM-EPDVDVWEKLMNLCRMHGN 594
G + A K+ M + D+ W ++ C MHG+
Sbjct: 346 AKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGH 383
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++ ++ LL IS D F L++A K A+++H V RL + T
Sbjct: 55 GLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTA 114
Query: 449 NGILKMYSECD----------------------SMDDAFSVFSNMTERDLTSWDTMITGF 486
N ++ MYS+ +D +F M RD+ SW+T+I G
Sbjct: 115 NALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGN 174
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
A+NG+ E+A+++ + + L+PD + + +V +G
Sbjct: 175 AQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V GK KEA+ + ++ I +D +QAC D L++ K +H ++++
Sbjct: 221 MISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK-- 278
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ + G ++ MY++C +++A VF M E+ ++ W MI+G+A +G G +A++
Sbjct: 279 HEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEW 338
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + AG++P+ F G+ +ACS G V E L FESM + +G PS++HY +VD+LG
Sbjct: 339 FMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLG 398
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L EA E IE MP++P+ +W L+N C +HGNLELG + +I+ Q+DP
Sbjct: 399 RAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIH 458
Query: 619 AGLVPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ A E KE+ KL +++ V HE+ AGD SHP+ +I +
Sbjct: 459 LASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHM 518
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++E GY P+ +L D++ + KE A+ HSE+LAV+ GL+S+ IRI+KN
Sbjct: 519 LEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKN 578
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+ +K+ISK+ RE+++RD RFH FKDG C+C DYW
Sbjct: 579 LRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC ALEE + +H H+ ++ + T N +L +YS+ + A +F +
Sbjct: 120 TFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 472 TERDLTSWDTMITGFAKNGLGE-------------------------------DAVDIFS 500
+RD SW++MI G+ K G E +A+++F
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + AG+K D+ + AC+ LG + +G +H + I P + ++DM
Sbjct: 240 RMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG--CVLIDMYAK 297
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+EA+E KM E V VW +++ +HG
Sbjct: 298 CGDLEEAIEVFRKME-EKGVSVWTAMISGYAIHG 330
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 241/431 (55%), Gaps = 22/431 (5%)
Query: 364 DDFAEASRSSQNNGTLEQLD------------GLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A R +QL+ G ++G + + + +++
Sbjct: 84 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHF 143
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ K VH H+ + L N IL MY++ SM DA VF ++
Sbjct: 144 TYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHV 203
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++DL +W++M+T FA+ GLG +AV F + ++ G+ + F+ + +ACS G V EG
Sbjct: 204 DKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGK 263
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M K++ + P + HYV++VD+LG G L++AL FI KMPM+P VW L+ CRM
Sbjct: 264 QYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRM 322
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGL--VPVNASELAKEKENKKLASQN 642
H N ++G A+ V +LDP N + G ++ K KK + +
Sbjct: 323 HKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACS 382
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ + VH + A D +HP +++IY + Q+++AGY+P T +VL +D++ ++ L
Sbjct: 383 WVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKL 442
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE++A++ L++ P A IRIMKN+R+CGDCHSA + ISK+ RE+++RD RFHHF
Sbjct: 443 QYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHF 502
Query: 763 KDGLCSCRDYW 773
G CSC DYW
Sbjct: 503 SSGSCSCGDYW 513
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ L++A G + + + +H + V + +L MY+ C MD A +VF +
Sbjct: 43 TFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL 102
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ SW+ +I GFA+ G GE + +F++ ++ G + + VFSA + +G + +G
Sbjct: 103 ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGK 162
Query: 532 LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
M K + +V +I+DM +G + +A + + + + D+ W ++
Sbjct: 163 WVHAHMIKSG---ERLSAFVGNTILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTAF 218
Query: 590 RMHG 593
+G
Sbjct: 219 AQYG 222
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 221/379 (58%), Gaps = 11/379 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D T + ACG LE + ++E + +N L M ++C MD A
Sbjct: 232 IKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAM 291
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
++F M +R++ SW T+I G+A NG E A+ +FS+ K G++P+ F+ V SACS G
Sbjct: 292 NLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTG 351
Query: 526 DVVEGMLHFESM--SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
V EG +F M S D I P +HY +VD+LG +G+L+EA FI+ MP+E D +W
Sbjct: 352 RVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWG 411
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPV--NASELAKEKE 634
L+ C +H N++LG A+++ +L P N + AG + K+K
Sbjct: 412 ALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWHCVEKVRQRMKKKG 471
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
+K+A+ + +E ++H GD SHP++ I A + L QMK GYIPET V HD++
Sbjct: 472 ARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVE 531
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
E KE L HSE+LA++ L++ + PIR+MKNLR+CGDCH+ K++S+I RE+I+R
Sbjct: 532 DEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMR 591
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHFK+G+CSC+D+W
Sbjct: 592 DKNRFHHFKNGICSCKDFW 610
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G VK G +A+ V G + + D TF +++AC + L +H HV +
Sbjct: 107 MKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGL 166
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MY + + A +F +M ERDL +W+ +I + G A+ F +
Sbjct: 167 EFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFRE 226
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AG+KPD + SAC LG + G +E +++ GI ++ + + +DM G
Sbjct: 227 MGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE-FAREEGIDSNIIVHNARLDMCAKCG 285
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
+D+A+ ++MP + +V W ++
Sbjct: 286 DMDKAMNLFDEMP-QRNVISWSTVI 309
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
M A +F M + W+T++ G+ KNG+ + AV ++ + + G++PD F V A
Sbjct: 85 MSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKA 144
Query: 521 CSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C+ L ++ G+ +H + V +++ + I M G L A EF+ +E D+
Sbjct: 145 CAELAELWAGLGMHGHVVKHGLEFVAAVRTELMI--MYVKFGELGCA-EFLFGSMVERDL 201
Query: 580 DVWEKLMNLCRMHG 593
W L+ +C G
Sbjct: 202 VAWNALIAVCVQTG 215
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 237/406 (58%), Gaps = 16/406 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V++G ++ +++ +++ I D T++ +++AC +L K +H H+
Sbjct: 472 MISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSG 531
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + + ++ MY++C S+ DA +F M R+ SW+ +I+ +A+NG G+ + +F
Sbjct: 532 YISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFE 591
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++GL+PD + + ACS G V EG+ +F+SM++ Y +VP +HY S +DML
Sbjct: 592 EMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRG 651
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G DEA + + +MP EPD +W ++N C +H N EL + A QL ++ +
Sbjct: 652 GRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAAN---QLFNMKVLRDAAPY 708
Query: 621 LVPVNASELAKEKEN-------------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ N A E +N KK+ + + +E++ K H + A D +HP+ +I
Sbjct: 709 VTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIM 768
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L +M + GY P++ LH++D+E K E+L HSER+A++ L+S+P +PI +M
Sbjct: 769 KKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVM 828
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR C DCH+A+K+ISKIV RE+ +RD+ RFHHF+DG C+CRDYW
Sbjct: 829 KNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%), Gaps = 19/285 (6%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGL---------VKEGKVKEAIEV 397
+ N +A+ +L+ D EAS+ + ++DG+ G+VKE++E+
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYE---MPEVDGISYNVLVTCYAWNGRVKESLEL 387
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L+ F+ L+ + L+ + +H + + N ++ MY++
Sbjct: 388 FKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAK 447
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C +A +FS++ + W MI+ + + GL ED + +F + ++A + D + +
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507
Query: 518 FSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
AC++L + G LH + Y + ++ ++VDM G + +AL+ ++MP+
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGY--ISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR 565
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
V W L++ +G+ GD + E++ S L S + L
Sbjct: 566 NSVS-WNALISAYAQNGD---GDCTLRLFEEMVRSGLQPDSVSLL 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 76/146 (52%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + +EA + + + I D + + L+ + ++ E + VH HV +L
Sbjct: 170 IGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGY 229
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L Y + S+ AF +F+++ ERD +++ ++TG++K G +A+++F +
Sbjct: 230 DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFK 289
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV 527
++ G +P + F + +A L D+
Sbjct: 290 MQEVGYRPTEFTFAAILTAGIQLDDI 315
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G KEG +EAI + +++ TF+ ++ A +E + VH V +
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N +L YS+ D + +A +F M E D S++ ++T +A NG ++++++F +
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390
Query: 502 FKQAGLKPDDQIFIGVFS-ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G + F + S A +L + +H +++ D + + S+VDM
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD--AISEILVGNSLVDMYAKC 448
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G EA + ++ V W +++
Sbjct: 449 GEFGEANRIFSDLAIQSSVP-WTAMIS 474
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 226/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +E++++ ++ + F+ + AC AL + +H + RL
Sbjct: 398 MISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLG 457
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MY++C ++ A +F M D SW+ MI ++G G A+++F
Sbjct: 458 FDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFE 517
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + PD F+ V S CS G V EG +F+SMS YGI P HY ++D+L
Sbjct: 518 LMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRA 577
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G EA + IE MP+EP +WE L+ CR+HGN++LG + AE + +L P
Sbjct: 578 GKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLS 637
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + G +L ++K KK + +EV +KVH + D HPE +Y +
Sbjct: 638 NMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLE 697
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M++ GYIP+T+FVLHD++ E KE L HSE+LAV GLL P A +R+ KNLR
Sbjct: 698 ELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLR 757
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A K +SK+V RE+++RD KRFHHFK+G CSC +YW
Sbjct: 758 ICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 51/288 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V G EA+E+ + I D T++ ++ AC +A K VH ++ R
Sbjct: 262 MISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTE 321
Query: 440 --------LS-------------------------PLR-VSTYNGILKMYSECDSMDDAF 465
LS P++ + ++N IL Y +D+A
Sbjct: 322 PRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAK 381
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
S F M ER+L +W MI+G A+NG GE+++ +F++ K G +P D F G AC+ L
Sbjct: 382 SFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLA 441
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
++ G LH + + G S+ +++ M G ++ A MP V W
Sbjct: 442 ALMHGRQLHAQLVR--LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS-WNA 498
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDPSR------LNEKSKAGLV 622
++ HG+ LEL + + E + P R L+ S AGLV
Sbjct: 499 MIAALGQHGHGAQALELFELMLK--EDILPDRITFLTVLSTCSHAGLV 544
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ ++ Y +D A MTE+ + +W+ MI+G+ +G +A+++F + G
Sbjct: 227 SWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG 286
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS----TG 561
++ D+ + V SAC+ G + G +H + + PS+ +S+ + L + G
Sbjct: 287 IQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPR--PSLDFSLSVNNALATLYWKCG 344
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+DEA + +MP++ D+ W +++
Sbjct: 345 KVDEARQVFNQMPVK-DLVSWNAILS 369
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 230/404 (56%), Gaps = 16/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V++ + +EA+ + + K + D TF+ ++ C AL+ A+ VHE +
Sbjct: 113 MIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKR 172
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ MYS+C + A +F + ++ W+ MI+G A +GL DA+ +F+
Sbjct: 173 IELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFT 232
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + PD F+G+ +ACS G V EG +F+ M Y + P ++HY ++VD+LG
Sbjct: 233 KMEVENVLPDAITFLGILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRA 292
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EA I+ MPMEPDV +W L+ CR + ELG+ + SRL
Sbjct: 293 GLLEEAFAMIKSMPMEPDVVIWRALLGACRTYKKPELGE-----AAMANISRLRSGDYVL 347
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + S E+ K+K K+ ++ E +H ++AGD SHPET+ IY +
Sbjct: 348 LSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKM 407
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ GL + K AGY+P T V D+ +E KE L HSE+LA+++G+L + + A +RI KN
Sbjct: 408 LEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKN 467
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCHS +KI+S+++ R +I+RD RFH F++GLCSC DYW
Sbjct: 468 LRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 376 NGTL---EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA- 431
NGT ++L L++ GK I+ L + + I+ T LM + ++
Sbjct: 2 NGTFADYQELYNLLQSGKTSMDIKTLSKIHSRIITFSYGTSPSLMASLMLKYVHCNCRSI 61
Query: 432 VHEHVERLLS-PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
V++ ++++ + + N I+ ++ A VF+ M RD+ +W+TMI G+ +
Sbjct: 62 VYKVIDQVFCWSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKA 121
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVP 545
E+A+ +F ++ ++PD F V + C+ LG + V +L + + ++ I+
Sbjct: 122 RFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNF-ILS 180
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
S +++DM G + A E + + +V +W +++ +HG
Sbjct: 181 S-----ALIDMYSKCGKIQTAKEIFDGVQ-RNNVCIWNAMISGLAVHG 222
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 227/401 (56%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G + G V+EA+ + + + + TFS L+ CG+ +L K +H +V
Sbjct: 243 LAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGF 302
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY +C + A +F M+ D+ SW MI G+A +G +A+ +F +
Sbjct: 303 EDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFER 362
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ KP+ F+ V +ACS G V +G +F+SMS YGIVP+++H+ ++ D LG G
Sbjct: 363 MELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAG 422
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
LDEA FI KM ++P VW L+ CR+H N L + A+ + +L+P + N
Sbjct: 423 ELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSN 482
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S +G + E ++K KK + + +EV+SK+H + A D SHP D+I +
Sbjct: 483 MYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNA 542
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
QM G++P T V DI++E K L HSE+LA+ G++S+PA IR+MKNLRV
Sbjct: 543 FSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRV 602
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ K ISK+ RE+++RDA RFHHFKDG CSC D+W
Sbjct: 603 CIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC----------ISVDLPTF 413
D+ E S N L G +EG+ EA LG + K C +S LP F
Sbjct: 128 DEMIERDVVSWNTLVL----GCAEEGRHHEA---LGFVRKMCREGFRPDSFTLSTVLPIF 180
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
++ C D K E VH R V + ++ MY+ C D + VF N+
Sbjct: 181 AE----CADVKRGLE---VHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPV 233
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
RD W++++ G A+NG E+A+ IF + QAG++P F + C L L
Sbjct: 234 RDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLAS-----LR 288
Query: 534 FESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
F Y I + V S++DM G + A +KM PDV W ++
Sbjct: 289 FGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGY 347
Query: 590 RMHG 593
+HG
Sbjct: 348 ALHG 351
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 11/184 (5%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
ST I+ + + + VF M ERD+ SW+T++ G A+ G +A+ + +
Sbjct: 105 STGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCRE 164
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G +PD V + DV G L + G + S++DM + D
Sbjct: 165 GFRPDSFTLSTVLPIFAECADVKRG-LEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDY 223
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
+++ + +P+ + +W L+ C +G++E E L R ++ VPV
Sbjct: 224 SVKVFDNLPVRDHI-LWNSLLAGCAQNGSVE---------EALGIFRRMLQAGVRPVPVT 273
Query: 626 ASEL 629
S L
Sbjct: 274 FSSL 277
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 235/398 (59%), Gaps = 15/398 (3%)
Query: 389 GKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
GK EA+ V L+ Q + ++ T + AC ALE + +H ++++ +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ ++ MYS+C ++ + VF+++ +RD+ W MI G A +G G +AVD+F + ++A +
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV 462
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F VF ACS G V E F M +YGIVP KHY IVD+LG +GYL++A+
Sbjct: 463 KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV--- 624
+FIE MP+ P VW L+ C++H NL L + + +L+P N+ + L +
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR--NDGAHVLLSNIYAK 580
Query: 625 -----NASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
N SEL K L + + +E+ +HE+ +GD +HP ++K+Y + + +
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640
Query: 677 MKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K GY PE VL I ++E KE++L HSE+LA+ +GL+S+ A IR++KNLRVCGD
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHS K+IS++ RE+I+RD RFHHF++G CSC D+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 34/245 (13%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V++G +A+E+ +E + + T ++ AC + LE + V ++E
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA------------- 487
+ ++ N +L MY++C S++DA +F M E+D +W TM+ G+A
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 488 ------------------KNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVV 528
+NG +A+ +F + + Q +K + + SAC+ +G +
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G S K +GI + +++ M G L+++ E + + DV VW ++
Sbjct: 383 LGRW-IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGG 440
Query: 589 CRMHG 593
MHG
Sbjct: 441 LAMHG 445
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++A + +L +++H + V N ++ Y C +D A VF+ +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ SW++MI GF + G + A+++F + + +K +GV SAC+ + ++ G
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S ++ + ++ +++DM G +++A + M E D W +++
Sbjct: 253 -QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLD 306
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 235/398 (59%), Gaps = 13/398 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G+ EA+E+ ++ + + D FS ++ C + AL +A+ +H V +
Sbjct: 88 QQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALAQARILHATVAGTELEQDMV 147
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY +C +++A VF M +D+ SW ++I +A+ G A ++F +QAG
Sbjct: 148 VKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSIIAAYAQQGSASAAFELFHAMQQAG 207
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
D IF+ V S C+ G + + F SM +DYG+ P ++Y I+D+LG G L +
Sbjct: 208 EAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDV 267
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+ +E M +EPD W +N C++H +++ G R A+ + QL+ R N S L ++A
Sbjct: 268 EDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRAAQRLVQLN--RRNSASYVLLSDIHA 325
Query: 627 -----SELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
AK + KK+ + +E++ KVH++ +G +HP D+I+A ++ L
Sbjct: 326 VCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFASGSRTHPRNDEIFAELQRLGV 385
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
M+EAGY+P+T VL D+++E KE+ L HSE+ A++ GL+S+P+ P+R++KNLRVC D
Sbjct: 386 LMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLRVCTD 445
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K ISKI GR++ +RDA RFH FKDG CSC+DYW
Sbjct: 446 CHTATKFISKITGRQITVRDANRFHEFKDGFCSCKDYW 483
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ +++AC L + +H + L L ++ MYS CD D A VF
Sbjct: 9 DRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPDKAIEVF 68
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M + + W MI ++ G G +A+++F + G++ D F V C+ L +
Sbjct: 69 DAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANLAALA 128
Query: 529 EG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ +LH + +K+ ++V+M G G L+EA + EKM D+ W ++
Sbjct: 129 QARILHATVAGTELEQDMVVKN--TLVNMYGKCGKLNEARQVFEKMA-SKDMVSWTSII 184
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 232/371 (62%), Gaps = 11/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S ++ AC + +LE+ K VH HV + N ++ MY++ S+ DA VF +
Sbjct: 309 TYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL 367
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ SW+++I+G+A++GLG +A+ +F Q +A ++P++ F+ V +ACS G + EG
Sbjct: 368 VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQ 427
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+FE M K + I + H+V++VD+LG G L+EA +FIE+MP++P VW L+ CRM
Sbjct: 428 YYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRM 486
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAKEKENKKLASQN 642
H N++LG AE + +LDP N + AG + ++ KE KK + +
Sbjct: 487 HKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACS 546
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ ++VH + A D SHP ++I + + ++KE GY+P+T VL ++Q+ +E L
Sbjct: 547 WVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKL 606
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ +L +P IRI KN+R+CGDCHSA K S+++GRE+I+RD RFHHF
Sbjct: 607 QYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHF 666
Query: 763 KDGLCSCRDYW 773
G+CSCRDYW
Sbjct: 667 LHGMCSCRDYW 677
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ VL L+ + + +S+++ C + L++ +A+H H++ + N IL M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y++C S+++A +F M +D+ SW +I+G++++G +A+ +F + G +P++
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ A S G + S YG ++ S++DM ++ EA
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 260
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA+ + + + T S L++A G + + +H +
Sbjct: 178 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 237
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ V + +L MY+ M +A +F+++ +++ SW+ +I G A+ G GE + +F Q
Sbjct: 238 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQ 297
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G +P + V AC++ G + +G + K G P +++DM +G
Sbjct: 298 MLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSG 355
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
+ +A + ++ ++ D+ W +++ HG LG ++ EQ+ +++
Sbjct: 356 SIKDAKKVFRRL-VKQDIVSWNSIISGYAQHG---LGAEALQLFEQMLKAKV 403
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 240/404 (59%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G KEA+++ ++ + D + + + AC ALE+ K +H ++ + +
Sbjct: 248 ISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTK--T 305
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+R+ + G ++ MY++C M +A VF N+ + + +W +I+G+A +G G +A+ F
Sbjct: 306 RIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKF 365
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++ G+KP+ F V +ACS G V EG L F +M +DY + P+++HY +VD+L
Sbjct: 366 MEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSR 425
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP--------- 610
G LDEA FI++MP++P+ +W L+ CR+H N+ELG+ EI+ +DP
Sbjct: 426 AGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK 485
Query: 611 SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ ++ K L KE+ K+ + + + HE+ AGD SHPE +KI +
Sbjct: 486 ANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKW 545
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL-AHSERLAVSHGLLSSPARAPIRIMKN 729
+ +R +++E GY+PE +L D+ + + E ++ HSE+LA+++GL+ + IRIMKN
Sbjct: 546 KIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGTTIRIMKN 605
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISKI R++++RD RFHHF+DG CSC DYW
Sbjct: 606 LRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV--------------------------------ERL 439
TF L++AC + ALEE +H + +R+
Sbjct: 146 TFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRI 205
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P VS +N ++K Y++ MD A ++F M E++ SW TMI+G+ + G+ ++A+ +F
Sbjct: 206 PKPDAVS-WNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLF 264
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + + ++PD+ SAC+ LG + +G ++K + S+ V ++DM
Sbjct: 265 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCV-LIDMYAK 323
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G + EALE + + V W L++ HG+
Sbjct: 324 CGDMGEALEVFKNI-QRKSVQAWTALISGYAYHGH 357
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 231/395 (58%), Gaps = 17/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVSTYN 449
+EA+ ++ I D T ++ +C + +LEE H V L+ + VS N
Sbjct: 361 EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS--N 418
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y +C S++DA +F M+ D SW ++TG+A+ G ++ +D+F + GLKP
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D FIGV SACS G V +G +F+SM KD+GIVP HY ++D+ +G EA EF
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA--- 626
I++MP PD W L++ CR+ GN+E+G AE + + DP N S L ++A
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ--NPASYVLLCSMHAAKG 596
Query: 627 --SELA------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+E+A ++++ KK + ++ ++KVH + A D SHP + +IY + L ++M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMA 656
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY P+ VLHD+ K + HSE+LA++ GL+ P PIRI+KNLRVC DCH+
Sbjct: 657 EEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHN 716
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A K ISKI GR++++RDA RFH F DG CSC D+W
Sbjct: 717 ATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 327 SRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV 386
+RR +Q+ E + + G++ +++ + K R S T+ + GL
Sbjct: 200 ARRVFQEM--EAKTVVMYNTLITGLLRCKMIEDAKGLFQLM-VDRDSITWTTM--VTGLT 254
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G EA++V + + + +D TF ++ ACG ALEE K +H ++ R V
Sbjct: 255 QNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVF 314
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ ++ MYS+C S+ A +VF MT R++ SW MI G+ +N E+AV FS+ + G
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG 374
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+KPDD V S+C+ L + EG F ++ G++ + ++V + G G +++A
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGA-QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
++M V W L+
Sbjct: 434 HRLFDEMSFHDQVS-WTALVT 453
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 411 PTF--SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
PTF + L+ A + L A+ V + + P + T N +L + + D +F
Sbjct: 47 PTFLLNHLLTAYAKSGRLARARRVFDEMP---DP-NLFTRNALLSALAHSRLVPDMERLF 102
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDV 527
++M ERD S++ +ITGF+ G +V ++ + ++ ++P + SAL D
Sbjct: 103 ASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDR 162
Query: 528 VEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
G +H + + +G + +VDM G + +A ++M
Sbjct: 163 ALGHSVHCQVLRLGFGAYAFVGS--PLVDMYAKMGLIRDARRVFQEM 207
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 242/440 (55%), Gaps = 26/440 (5%)
Query: 345 GNIQNGMMASQVLNNC--KHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE 402
GNI N A +V N K+ + + NG E+ E +EV GLL
Sbjct: 279 GNILN---ARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPE------MEVDGLLP 329
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
+ TF+ L+ +C AL K +H +++ + N ++ MYS+ S++
Sbjct: 330 NE------YTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIE 383
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A VF M RD +W MI G + +GLG +A+ +F + A P F+GV SAC+
Sbjct: 384 AAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACA 443
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
LG V EG + + K GI P ++HY IV +L G LDEA F++ P++ DV W
Sbjct: 444 HLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAW 503
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEK 633
L++ C +H N LG + AE+V Q+DP S + K+K V +L +E+
Sbjct: 504 RTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRER 563
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
KK + +E+R+ +H + + +HPE+++IY ++ L ++ GY+P+ V HD+
Sbjct: 564 NVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDV 623
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
+ E K E + HSE+LA+++GL+ +P+ APIR++KNLR+C DCHSA+K+ISK+ R +I+
Sbjct: 624 EDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIV 683
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RDA RFH F DG CSC DYW
Sbjct: 684 RDANRFHCFGDGGCSCADYW 703
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++GL++ G EA+EVL + +CI D T+ C K L VH + R +
Sbjct: 202 INGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGA 261
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ I+ MY +C ++ +A VF+ + +++ SW ++ +++NG E+A++ F +
Sbjct: 262 EYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPE 321
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK----DYGIVPSMKHYVSIVDML 557
+ GL P++ F + ++C+ + + G L + K D+ IV + ++++M
Sbjct: 322 MEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGN-----ALINMY 376
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+G ++ A + +M D W ++ HG
Sbjct: 377 SKSGSIEAAHKVFLEMICR-DSITWSAMICGLSHHG 411
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH--VERLLSPLRVSTYNGILKMYSE 457
LL+ + L QL++ D K L+ K +H H + + + N ++ +Y++
Sbjct: 15 LLKSSTVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAK 74
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIG 516
CD + A +F M +R++ SW ++ G+ NGL + + +F ++P++ IF
Sbjct: 75 CDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFAT 134
Query: 517 VFSACSALGDVVEGM----------LHFESMSKDYGI------------------VPSMK 548
+ S+CS G VVEG L F K+ I VP +
Sbjct: 135 IISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLD 194
Query: 549 --HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL-----MNLCRMHGNLELG 598
Y I++ L GY EALE +++M E VW+ + LC +L LG
Sbjct: 195 VFSYNIIINGLLENGYPSEALEVLDRMVDE--CIVWDNVTYVTAFGLCSHLKDLRLG 249
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 394 AIEVLGLLEKQCISVDLP-----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
+EVL L K ISVD F+ ++ +C D+ + E H + L S L Y
Sbjct: 109 VLEVLRLF-KTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYA--LKSGLVFHQY 165
Query: 449 --NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MYS + A SV+ + D+ S++ +I G +NG +A+++ +
Sbjct: 166 VKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDEC 225
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LH---FESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ D+ ++ F CS L D+ G+ +H F + ++ V S +I+DM G G
Sbjct: 226 IVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSS-----AIIDMYGKCGN 280
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
+ A + ++ + +V W ++
Sbjct: 281 ILNARKVFNRLQTK-NVVSWTAIL 303
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 231/379 (60%), Gaps = 23/379 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ L S LR S ++ MY++C ++ A
Sbjct: 319 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS----LIDMYAKCGDIEAAH 374
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF++M + L+SW+ MI GFA +G A D+FS+ ++ G++PDD +G+ SACS G
Sbjct: 375 QVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSG 434
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F+S+++DY I P ++HY ++D+LG G EA E I MPMEPD +W L
Sbjct: 435 LLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSL 494
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKE 634
+ C+MHGNLEL + A+ + +++P N S L + A+ E+ K
Sbjct: 495 LKACKMHGNLELAESFAQKLMEIEPE--NSGSYVLLSNIYATAGRWEDVARIREVLNGKG 552
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
KK+ + +E+ S VHE+ GD HP++ +IY ++ + ++EAG++P+T VL +++
Sbjct: 553 MKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEME 612
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE AL HSE+LA++ GL+S+ + ++KNLRVC +CH A K+ISKI RE++ R
Sbjct: 613 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVAR 672
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHF+DG+CSC DYW
Sbjct: 673 DRTRFHHFRDGVCSCCDYW 691
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 104/217 (47%), Gaps = 7/217 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G V+ +EA+E+ + + + D T ++ AC + ++E + +H V+
Sbjct: 186 MITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHH 245
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
S L++ N + +YS+C ++ A +F ++ +D+ SW+T+I G+ L ++A+
Sbjct: 246 GFGSSLKI--VNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALL 303
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
+F + ++G P+D + V AC+ LG + G +H + G+ S++DM
Sbjct: 304 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDM 363
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + M M + W ++ MHG
Sbjct: 364 YAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHG 399
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN- 470
TF L+++C +K EE + +H V +L L + ++ MY+ ++DA VF
Sbjct: 85 TFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXS 144
Query: 471 ------------------------------MTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+TERD+ SW+ MITG+ +N E+A+++F
Sbjct: 145 SQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFK 204
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SAC+ G + G + +G S+K + + +
Sbjct: 205 EMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC 264
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 265 GDVEIASGLFEGLSCK-DVVSWNTLI 289
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 234/400 (58%), Gaps = 15/400 (3%)
Query: 387 KEGKVKEAIEVL--GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
K GK EA+E+ +L + T ++QAC ALE+ K +H ++ R
Sbjct: 252 KNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSI 311
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY+ C ++ +F M ++D+ W+++I+ + +G G A+ IF +
Sbjct: 312 LPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMID 371
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G P FI V ACS G V EG FESM K++GI PS++HY +VD+LG LD
Sbjct: 372 HGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLD 431
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + IE + +EP VW L+ CR+H ++EL +R ++ + +L+P+ N + L +
Sbjct: 432 EAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT--NAGNYVLLADI 489
Query: 625 NA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A +L +E +K+ ++ +EVR K++ + + D +P+ ++++AL+ L
Sbjct: 490 YAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNL 549
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+MK+ GY P+T+ VL+D+DQE KE +L HSE+LAV+ GL+++ IRI KNLR+C
Sbjct: 550 SNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLC 609
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS K ISK RE+++RD RFHHFKDG+CSC DYW
Sbjct: 610 EDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 109/233 (46%), Gaps = 15/233 (6%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKAL----EEAKAVHEHVERL 439
L G+ + +E+ + +S D T++ L++AC ++ L ++ K +H H+ R
Sbjct: 144 ALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRH 203
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MY+ + A +VF M +++ SW MI +AKNG +A+++F
Sbjct: 204 GYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELF 263
Query: 500 SQ--FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVD 555
+ P+ + V AC+A + +G ++H + + I+P + +++
Sbjct: 264 REMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS---ALIT 320
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
M G L+ ++M + DV +W L++ +HG G + +I E++
Sbjct: 321 MYARCGKLESGQLIFDRM-HKKDVVLWNSLISSYGLHG---YGRKAIKIFEEM 369
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ M+SE D++D+A VF +R + W+ + A G G D ++++ + G+ D
Sbjct: 110 LINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSD 169
Query: 511 DQIFIGVFSACSALGDVVEGM-----LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ + AC A +V + +H + YG + +++DM G +
Sbjct: 170 RFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG--AHVHVMTTLMDMYARFGCVSY 227
Query: 566 ALEFIEKMPMEPDVDVWEKLM 586
A ++MP++ +V W ++
Sbjct: 228 ASAVFDEMPVK-NVVSWSAMI 247
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 244/403 (60%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + EA+ + ++ + + + T ++ +C +L+ K +HE+ ++
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG 262
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ M+++C S+DDA S+F NM +D +W MI +A +G E+++ +F
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFE 322
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ F+G+ +ACS G V EG +F M ++GIVPS+KHY S+VD+LG
Sbjct: 323 RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRA 382
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G+L++A EFI+K+P+ P +W L+ C H NLEL ++ +E + +LD S
Sbjct: 383 GHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILS 442
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L ++K + ++ K+++ K+ + +EV + VHE+ +GD T K++ +
Sbjct: 443 NLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 502
Query: 672 GLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++K AGY+P+T V+H D+ + KE L HSE+LA++ GLL++P IR++KNL
Sbjct: 503 EMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNL 562
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA K+IS I GR++++RD +RFHHF+DG CSCRD+W
Sbjct: 563 RVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC AKALEE + +H +L V ++ MY+EC+ +D A VF +
Sbjct: 133 TFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRI 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E + ++ MITG+A+ +A+ +F + + LKP++ + V S+C+ LG + G
Sbjct: 193 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGK 252
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
E +K +G +K +++DM G LD+A+ E M + D W ++
Sbjct: 253 WIHE-YAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYK-DTQAWSAMIVAYAN 310
Query: 592 HGNLE 596
HG E
Sbjct: 311 HGQAE 315
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 226/397 (56%), Gaps = 9/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +E I+ + + I D T L+QAC + A+++H + ++
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKI 273
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ +L Y++ + ++ VF+ + D +W M+ G+A +GLG +A+ +F
Sbjct: 274 TIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANK 333
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
GL+PD F + SACS G V EG +F MS+ YGI P + HY +VD+LG G L++
Sbjct: 334 GLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLND 393
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV---EQLDP------SRLNEK 616
A E I+ MPMEP+ VW L+ CR+HGN+ELG AE + E LDP S +
Sbjct: 394 AYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSA 453
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
S++ L KE+ K+ + +E +K H + GD SHPET+KIY+ + L +
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+++AGY +T +VL D+++E KE+ + HSE+LA++ GLL S + I KNLR+CGDC
Sbjct: 514 IRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDC 573
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HS K+IS I R +IIRD KRFHHF DG CSC DYW
Sbjct: 574 HSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L +QC + + S L+ A ++ + +H V + L + ++ Y++
Sbjct: 31 LVRQCATPE-AIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGY 89
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+DA +F +M +DL SW+++I+GF++ L ++ + +KP++ + + SA
Sbjct: 90 AEDALKLFDDMPHKDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMISA 148
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C+ D + + G +K S+++M G +G L A E +P +P+
Sbjct: 149 CNGALDAGK---YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTV 204
Query: 581 VWEKLM 586
W ++
Sbjct: 205 SWNSII 210
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC A L+ K +H ++ L V N ++ MY + + A +F +
Sbjct: 141 TILSMISACNGA--LDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI 198
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+ + SW+++I NG + +D F++ ++ G++ D+ + + AC LG
Sbjct: 199 PDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 364 DDFAEASRSSQNNGTLEQ------------LDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A+ R S + G + L G G +EAI++ + + + D
Sbjct: 281 DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF+ L+ AC + + E K+ + + + P RV Y+ ++ + C ++DA+ V
Sbjct: 341 TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEP-RVDHYSCMVDLLGRCGLLNDAYEVIQ 399
Query: 470 NM-TERDLTSWDTMI 483
NM E + W ++
Sbjct: 400 NMPMEPNAGVWGALL 414
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 224/391 (57%), Gaps = 9/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++AI++ + ++ + D S L+ AC A E+ K VH H+ + V N +
Sbjct: 487 EDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNAL 546
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ Y++C S++DA FS + E+ + SW MI G A++G G+ A+D+F + + P+
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC+ G V E +F SM + +GI + +HY ++D+LG G LD+A+E +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV-- 622
MP + + VW L+ R+H + ELG AE + L+P + N + AG+
Sbjct: 667 SMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDD 726
Query: 623 PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
+L K+ + KK + + +E++ KVH + GD SHP IYA + L M +AGY
Sbjct: 727 VAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGY 786
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P LHD+D+ KE L HSERLAV+ L+S+PA APIR+ KNLR+C DCH+A K
Sbjct: 787 VPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKF 846
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IS IV RE+IIRD RFHHF+DG CSCRDYW
Sbjct: 847 ISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ VK + A++V G + + + FS ++ AC ++ LE + VH V R
Sbjct: 174 MSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGY 233
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V T N ++ MYS+ + A VF + E D+ SW+ I+G +G + A+++ Q
Sbjct: 234 DKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
K +GL P+ + AC+ LG + G + + D I +VDM
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIA------FGLVDM 347
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G LD+A + + +P + D+ +W L++ C HG
Sbjct: 348 YAKHGLLDDAKKVFDWIP-QRDLVLWNALISGCS-HG 382
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 70/132 (53%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + K+ V+ T + ++++ +A+ + + VH E+L NG++
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLI 446
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
Y +CD ++ A+ VF D+ ++ +MIT ++ GEDA+ +F + + GL PD
Sbjct: 447 DSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPF 506
Query: 513 IFIGVFSACSAL 524
+ + +AC++L
Sbjct: 507 VLSSLLNACASL 518
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G + A+E+L ++ + ++ T S +++AC + A + +H + + +
Sbjct: 275 ISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA 334
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF + +RDL W+ +I+G + +A+ +F +
Sbjct: 335 DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCR 394
Query: 502 FKQAGLKPDDQIFIGVFSACSAL---------------------GDVVEGML--HFESMS 538
++ G + V + ++L VV G++ +++
Sbjct: 395 MRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDC 454
Query: 539 KDYGIVPSMKH-------YVSIVDMLGSTGYLDEALEFIEKMP---MEPDVDVWEKLMNL 588
+Y KH + S++ L + ++A++ +M ++PD V L+N
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNA 514
Query: 589 C 589
C
Sbjct: 515 C 515
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 48/319 (15%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L T L+ ++L + +H H+ L S L N +L YS+C A VF
Sbjct: 4 LETIGPLLTRYAATQSLLQGAHIHAHL--LKSGLFAVFRNHLLSFYSKCRLPGSARRVFD 61
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ + SW +++T ++ N + DA+ F + ++ ++ + V G +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ 121
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN-- 587
LH +M+ G + + ++V M G G++DEA ++ E + W LM+
Sbjct: 122 --LHALAMATGLGGDIFVAN--ALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177
Query: 588 --------LCRMHGNL--------ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK 631
++ G + E G C +V SR E + V+A +
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSC--VVNACTGSRDLEAGR----KVHAMVIRT 231
Query: 632 EKENKKLASQNLLEVRSKVHEYRAGDTSH---PETDKIY--ALIRG------------LR 674
+ + L+++ SK+ + R PETD + A I G L
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELL 291
Query: 675 AQMKEAGYIPETRFVLHDI 693
QMK +G +P F L I
Sbjct: 292 LQMKSSGLVPNV-FTLSSI 309
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 226/402 (56%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
L GL + G A+ V + + D + + +C + LE ++VH RL L
Sbjct: 115 LTGLARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGL 174
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P +S N ++ MY++ S+ +A VF R +W +I G+A+NG GE+++ +++
Sbjct: 175 EPF-LSVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYA 233
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +G +PD FIG+ ACS G V G HF+SM D+GI P HY +VD+LG
Sbjct: 234 EMVHSGCRPDYVTFIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRA 293
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G LDEA+E +++ M+ D VW+ L+ CR H N EL +R AE+V +LDP S
Sbjct: 294 GRLDEAMELLDQSTMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLS 353
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L + + L K + K + + H + D HP TD+IY +
Sbjct: 354 NLYSRERRWSDVARIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVE 413
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++ G++ +T + L D EG+E+ L HSERLAV+ GLL+ PA AP+R+ KNLR
Sbjct: 414 EMMEKVRAEGFVADTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLR 473
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH A+K+++K+ GRE+I+RD+ FHH +DG+CSC DYW
Sbjct: 474 VCGDCHVAIKMVAKVYGREIILRDSNCFHHMRDGVCSCGDYW 515
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y++ A ++F M RD+ +W +++TG A++G + A+ ++ +G++
Sbjct: 81 NALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVE 140
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD+ + S+C+ +E + + G+ P + S+V M TG L EA +
Sbjct: 141 PDEYVVAAALSSCAG-STTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARK 199
Query: 569 FIEKMPMEPDVDVWEKLM 586
+ + V W L+
Sbjct: 200 VFDATRLRCPV-TWTALI 216
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 237/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V+ G +EA+ + ++ + + D ++ AC ALE+ K VH +++
Sbjct: 180 MVNGYVQAGDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKA-- 237
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
++++ + G ++ MYS+C + A VF M +++ +W TMI G A +G G +AV +
Sbjct: 238 HGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVML 297
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F+Q + +G++PDD FIGV AC+ G V +G F+SM + YGI P ++HY +VD+L
Sbjct: 298 FAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLA 357
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G+L EA E I+KMPMEPD +W LM CR H N+E + A+ L+P +
Sbjct: 358 RNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVL 417
Query: 613 LNEKSKAGLVPVNASE---LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L+ A +A E L +EK K + +EV +H++ GD SHP I +
Sbjct: 418 LSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSK 477
Query: 670 IRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ +++ E GYIP+ + VL DI++E KE AL HSE+LA++ L+S PIRI K
Sbjct: 478 WYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFK 537
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH K+ISK+ GRE+++RD RFH FK+G CSC+DYW
Sbjct: 538 NLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCKDYW 582
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
R + + ST+N ++ Y+ + DA ++F M R+ SW M+ G+ + G G +A+
Sbjct: 136 RTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALR 195
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
IF++ + ++PDD + +GV +AC+ G + +G K +GI ++ ++VDM
Sbjct: 196 IFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKW-VHGYLKAHGIKINLFFGTALVDMY 254
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
G + A++ E+M + +V W ++ MHG G + Q++ S
Sbjct: 255 SKCGEVQLAMDVFERMQYK-NVLAWTTMIKGLAMHGR---GSEAVMLFAQMESS 304
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 246/440 (55%), Gaps = 16/440 (3%)
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ---LDGLVKEGKVKEAIEVLGLLEK 403
+ N +M V C++ ++ E RS ++ + + G + G ++A+ V +
Sbjct: 389 VGNALM--DVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRA 446
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
+ TFS +++AC + +++ +H +E+ N ++ Y++C + D
Sbjct: 447 AHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRD 506
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A VF ++ + D+ SW+ +I+G+A +G DA+++F++ ++ KP+D F+ + S C +
Sbjct: 507 ALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGS 566
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
G V +G+ F SM+ D+ I PSM HY IV +LG G L++AL+FI +P P VW
Sbjct: 567 TGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWR 626
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKEN- 635
L++ C +H N+ LG AE V +++P N + AG++ + L K N
Sbjct: 627 ALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILD-QVALLRKSMRNI 685
Query: 636 --KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
KK + +E++ +VH + G HP+ I A++ L + GY+P+ VLHD+
Sbjct: 686 GVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDV 745
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
D+E K L HSERLA+++GL +P PIRIMKNLR C DCH+ K+ISKIV RE+++
Sbjct: 746 DEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVV 805
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD RFHHF +G+CSC DYW
Sbjct: 806 RDINRFHHFDEGICSCGDYW 825
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++QAC + L+ + +H V +L + N ++ +Y++C +M+++ +F ++
Sbjct: 354 SLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSL 413
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV---- 527
+ + SW+T+I G+ ++G EDA+ +F + + A + F V AC+ +
Sbjct: 414 RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTV 473
Query: 528 -VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ ++ + + D + S+ +D G + +AL+ E + ++ DV W ++
Sbjct: 474 QIHSLIEKSTFNNDTIVCNSL------IDTYAKCGCIRDALKVFESI-IQCDVVSWNAII 526
Query: 587 NLCRMHGN----LELGDR 600
+ +HG LEL +R
Sbjct: 527 SGYALHGRATDALELFNR 544
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
VL + K +++D P + + AC K H+ + S L + YS
Sbjct: 152 VLTTILKVLVAMDAPGLTCCIHACA-------CKLGHDRNAFVGSSL--------IDAYS 196
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
C ++ A VF + +D +W M++ +++N + EDA++ FS+ + AG KP+ +
Sbjct: 197 LCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTS 256
Query: 517 VFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V A L V G +H ++ P + +++DM GY+++A E +P
Sbjct: 257 VLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGG--ALLDMYAKCGYIEDARTVFEIIPH 314
Query: 576 EPDVDVWEKLMN 587
+ DV +W L++
Sbjct: 315 D-DVILWSFLIS 325
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 398 LGLLEKQCISVDLPTF-----SQLMQAC---GDAKALEEAKAVHEHVERLLSPLRVSTY- 448
L L+ + S+ LP ++L+Q C GDA+A +AVH V + ++ T+
Sbjct: 30 LQWLDDELASLALPKLDSYACARLLQRCIARGDARA---GRAVHARVVQRGGVAQLDTFC 86
Query: 449 -NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N +L +Y++ + A +F M ER++ S+ T++ G+A G E+A +F + ++ G
Sbjct: 87 ANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGH 146
Query: 508 KPDDQIFIGVFSACSAL 524
+ + + + A+
Sbjct: 147 EVNHFVLTTILKVLVAM 163
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
+L MY++C ++DA +VF + D+ W +I+ +A++ E A ++F + ++ + P
Sbjct: 291 ALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVP 350
Query: 510 DDQIFIGVFSACS 522
++ GV AC+
Sbjct: 351 NEFSLSGVLQACA 363
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 238/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G V+ G +EA+ V ++ Q + D ++ AC ALE+ K VH +++
Sbjct: 196 MVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKA-- 253
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ +R++ + G ++ MY++C + VF M ++++ +W TMI G A +G G D++ +
Sbjct: 254 NNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTL 313
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FSQ + +G+KPDD FIG AC+ G V +G F SM +YGI P ++HY +VD+L
Sbjct: 314 FSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLA 373
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G L EA + +EKMPM+PD +W LM CR H N+EL + + +L+P +
Sbjct: 374 RNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVL 433
Query: 613 LNEKSKAGLVPVNASE---LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L A +A E L +EK +K + +E++ +H++ GD SHP I
Sbjct: 434 LGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTK 493
Query: 670 IRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ ++++ E GY+P+ + VL DI++E E AL HSE+LA++ L+S+ PIRI+K
Sbjct: 494 WYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVK 553
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH K+ISK+ GRE+I+RD RFH FKDG CSC+DYW
Sbjct: 554 NLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
ST+N ++ ++ + DA S+F M ER+ SW M+ G+ + G G +A+ +FSQ +
Sbjct: 160 STFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQ 219
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++PDD + +GV +AC+ LG + +G K I ++ ++VDM G +
Sbjct: 220 GVRPDDTVLVGVLAACAQLGALEQGKW-VHGYLKANNIRMTVFLGTALVDMYAKCGEVQL 278
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+E E M + +V W ++ MHG
Sbjct: 279 GMEVFEGMK-DKNVLAWTTMIKGLAMHGR 306
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 218/371 (58%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++QAC ALE+ K +H ++ R + N ++ MY C + VF NM
Sbjct: 288 TMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM 347
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW+++I+ + +G G+ A+ IF G+ P FI V ACS G V EG
Sbjct: 348 KKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ FESM Y I P M+HY +VD+LG L EA++ IE M EP VW L+ CR+
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRI 467
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H N+EL +R + ++ +L+P + + ++K + +L + + +KL +
Sbjct: 468 HCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCS 527
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV+ KV+ + + D +P+ ++I+AL+ L +MK GY+P+T VL+D+D+E KE +
Sbjct: 528 WIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIV 587
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
L HSE+LAV+ GL+++ IRI KNLR+C DCH+ K ISK RE+++RD RFHHF
Sbjct: 588 LGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHF 647
Query: 763 KDGLCSCRDYW 773
+DG+CSC DYW
Sbjct: 648 RDGVCSCGDYW 658
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 114/248 (45%), Gaps = 16/248 (6%)
Query: 412 TFSQLMQACGDAK----ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
T++ +++AC ++ L + K +H H+ R + +L +Y++ S+ A SV
Sbjct: 181 TYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS--QFKQAGLKPDDQIFIGVFSACSALG 525
F M ++ SW MI FAKN + A+++F F+ P+ + + AC+ L
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLA 300
Query: 526 DVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ +G ++H + + I+P + +++ M G G + + M + DV W
Sbjct: 301 ALEQGKLIHGYILRRQLDSILPVLN---ALITMYGRCGEVLMGQRVFDNMK-KRDVVSWN 356
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL 643
L+++ MHG G + +I E + ++ + + + A A E K+ +++
Sbjct: 357 SLISIYGMHG---FGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESM 413
Query: 644 LEVRSKVH 651
L + ++H
Sbjct: 414 LS-KYRIH 420
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 24/156 (15%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP--TFSQLMQACGDAKALEEAKAV 432
NN L Q L K G +K+A+ +L C + TF L+ +C +L V
Sbjct: 49 NNNQLIQ--SLCKGGNLKQALHLL------CCEPNPTQQTFEHLIYSCAQKNSLSYGLDV 100
Query: 433 HEHVERLLS-------PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
H R L P + ++ MY E S+D A VF ER + W+ +
Sbjct: 101 H----RCLVDSGFDQDPFLATK---LINMYYELGSIDRALKVFDETRERTIYVWNALFRA 153
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A G G++ +D++ Q G D + V AC
Sbjct: 154 LAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKAC 189
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 231/403 (57%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ ++ G KEAI + + + TF ++ A A E A H + ++
Sbjct: 249 IAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGF 308
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C +D + +F+ M +D SW+ M++G+A +G G+ A+ +FS
Sbjct: 309 LSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSL 368
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++ ++ D F+ V SAC G V EG F SMS Y I P ++HY +VD+LG G
Sbjct: 369 MQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 428
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
DE L FI+ MP+EPD VW L+ CRMH N++LG+ + + +L+P N L
Sbjct: 429 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR--NPAHFVVL 486
Query: 622 VPVNASE-------LAKEKEN----KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A A+ K N KK + +E+++KVH +R GD SHP+ + ++ L
Sbjct: 487 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLW 546
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +M++ GY+P+ VL ++++E KE L +HSERLA++ LL++P + I+I+KNL
Sbjct: 547 NTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNL 606
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+ K ISKI R +I+RDA RFHHF+DG+CSC DYW
Sbjct: 607 RVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 58/293 (19%)
Query: 370 SRSSQNNGTLEQLDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
+RS Q N LE +V++G ++ + + GL++ +S++ GD L+
Sbjct: 125 TRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVD---------MYSKM----GD---LKR 168
Query: 429 AKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
A+ V + + P R V +N ++ S+ + A VF M ++D SW TM+ G+A
Sbjct: 169 AREVFDKM-----PKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYA 223
Query: 488 KNGL------------------------------GEDAVDIFSQFKQAGLKPDDQIFIGV 517
NG ++A+ F Q + P+ F+ V
Sbjct: 224 HNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 283
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
A + L EGM F + G + + S++DM G LD + + +M +
Sbjct: 284 LPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKD 342
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
V W +++ +HG+ GDR + + S++ S + + ++A A
Sbjct: 343 TVS-WNAMLSGYAVHGH---GDRAIALFSLMQESQVQIDSVSFVSVLSACRHA 391
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 226/397 (56%), Gaps = 9/397 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +E I+ + + I D T L+QAC + A+++H + ++
Sbjct: 214 VTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKI 273
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ +L Y++ + ++ VF+ + D +W M+ G+A +GLG +A+ +F
Sbjct: 274 TIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANK 333
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
GL+PD F + SACS G V EG +F MS+ YGI P + HY +VD+LG G L++
Sbjct: 334 GLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLND 393
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV---EQLDP------SRLNEK 616
A E I+ MPMEP+ VW L+ CR+HGN+ELG AE + E LDP S +
Sbjct: 394 AYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSA 453
Query: 617 SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
S++ L KE+ K+ + +E +K H + GD SHPET+KIY+ + L +
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+++AGY +T +VL D+++E KE+ + HSE+LA++ GLL S + I KNLR+CGDC
Sbjct: 514 IRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDC 573
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HS K+IS I R +IIRD KRFHHF DG CSC DYW
Sbjct: 574 HSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L +QC + + S L+ A ++ + +H V + L + ++ Y++
Sbjct: 31 LVRQCATPE-AIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGY 89
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+DA +F +M +DL SW+++I+GF++ L ++ + +KP++ + + SA
Sbjct: 90 AEDALKLFDDMPHKDLVSWNSLISGFSRC-LHMSLTAFYTMKFEMSVKPNEVTILSMISA 148
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS D + + G +K S+++M G +G L A E +P +P+
Sbjct: 149 CSGALDAGK---YIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIP-DPNTV 204
Query: 581 VWEKLM 586
W ++
Sbjct: 205 SWNSII 210
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + AL+ K +H ++ L V N ++ MY + + A +F +
Sbjct: 141 TILSMISAC--SGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI 198
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+ + SW+++I NG + +D F++ ++ G++ D+ + + AC LG
Sbjct: 199 PDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLG 252
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 364 DDFAEASRSSQNNGTLEQ------------LDGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A+ R S + G + L G G +EAI++ + + + D
Sbjct: 281 DTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF+ L+ AC + + E K+ + + + P RV Y+ ++ + C ++DA+ V
Sbjct: 341 TFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEP-RVDHYSCMVDLLGRCGLLNDAYEVIQ 399
Query: 470 NM-TERDLTSWDTMI 483
NM E + W ++
Sbjct: 400 NMPMEPNAGVWGALL 414
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 240/405 (59%), Gaps = 13/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +EG + EA+++ L + +VD S +M D +E+ K +H ++ ++ S
Sbjct: 281 IQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPS 340
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L +S N I+ MY +C ++A +FS M R++ SW MITG+ K+GLGE A+ +F++
Sbjct: 341 GLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNR 400
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++ D+ ++ + SACS G + E +F + ++ + P+++HY +VD+LG G
Sbjct: 401 MQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAG 460
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L EA IE M ++P+ +W+ L++ CR+HGNLE+G EI+ ++D N
Sbjct: 461 QLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSN 520
Query: 615 EKSKAGLVP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++AG +L K K KK A Q+ +E+ ++H + GD +HP T+KI+ +++
Sbjct: 521 IYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKE 580
Query: 673 LRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR---APIRIMK 728
+ ++K E GY RF LHD+++E KEE L HSE+LA+ L+ IR+ K
Sbjct: 581 MERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFK 640
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH +K +SKI+ + ++RDA RFH F+DGLCSC DYW
Sbjct: 641 NLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 6/215 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G ++EG K ++ +L + + + TFS ++ACG +E +H +
Sbjct: 79 GYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEW 138
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N + MYS+C + A VF+ M R+L SW+ MI G G G ++ +F + +
Sbjct: 139 VSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQ 198
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGST 560
G PD+ F AC ALG + G +H +++ + I S+++ + +IVD+
Sbjct: 199 GQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPI--SIRNIIASAIVDLYAKC 256
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
GYL EA + +++ + ++ W L+ GNL
Sbjct: 257 GYLFEAQKVFDRIE-QKNLISWSALIQGFAQEGNL 290
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++L++ C ++ VH + + N ++ MY +C +D A SVF M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM- 531
ER++ SW ++ G+ + G + ++ + + +G+KP++ F AC ALG V GM
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + V + + + +DM G + A + KMP V W ++
Sbjct: 127 IHGMCVKSGFEWVSVVGN--ATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMI 178
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
TF+ ++ACG A+ +H + P+ + + I+ +Y++C + +A VF
Sbjct: 208 TFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFD 267
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD---QIFIGVFSACSALGD 526
+ +++L SW +I GFA+ G +A+D+F Q +++ D I +GVF + L
Sbjct: 268 RIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVF---ADLAL 324
Query: 527 VVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V +G +H + G+ S+ + SI+DM G +EA +M + +V W +
Sbjct: 325 VEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTEEAERLFSEMQVR-NVVSWTVM 381
Query: 586 MNLCRMHGNLELGDRCAEIVE--QLDPSRLNEKSKAGLV 622
+ HG LG++ + QLD L+E + L+
Sbjct: 382 ITGYGKHG---LGEKAIHLFNRMQLDGIELDEVAYLALL 417
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 261/506 (51%), Gaps = 32/506 (6%)
Query: 289 GQHQQALSGHYS-GNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNI 347
G+H +A S Y G+ N + ++ + + RQ + + + ++
Sbjct: 383 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI-FDAHV 441
Query: 348 QNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIE 396
NG++ A +V C D A S + L Q D EG +K +E
Sbjct: 442 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT----ALSQCDH--GEGAIKLFME 495
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L ++ + D S L+ AC A E+ K VH H+ + N ++ Y+
Sbjct: 496 ML----RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C S++DA FS++ ER + SW MI G A++G G+ A+++F + G+ P+
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V AC+ G V E +F SM + +GI + +HY ++D+LG G LD+A+E + MP +
Sbjct: 612 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 671
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNAS 627
+ VW L+ R+H + ELG AE + L+P + N + +G+
Sbjct: 672 ANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVR 731
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+L K+ KK + + +EV+ KVH + GD SHP T +IY+ + L M +AGYIP
Sbjct: 732 KLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVD 791
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
LHD+D+ KE L HSERLAV+ LLS+P APIR+ KNLR+C DCH A K IS IV
Sbjct: 792 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIV 851
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
RE+IIRD RFHHF+DG CSC DYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ VK + +AI+V G + I FS ++ AC ++ ++ + VH V R+
Sbjct: 174 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY 233
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V T N ++ MY + +D A +F M + D+ SW+ +I+G NG A+++ Q
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
K +GL P+ + + AC+ LG + G M+ + S DY V +VD
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-------IGVGLVD 346
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M +LD+A++ + M D+ +W L++ C HG
Sbjct: 347 MYAKNHFLDDAMKVFDWMS-HRDLILWNALISGCS-HG 382
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ EA + L K+ + V+ T + ++++ +A + VH E++
Sbjct: 376 ISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGF 435
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
NG++ Y +C + DA VF + D+ + +MIT ++ GE A+ +F +
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFME 495
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
+ GL+PD + + +AC++L
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASL 518
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY MDDA VF +ER+ SW+ +++ + KN DA+ +F +
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G++P + F V +AC+ ++ G +M G + ++VDM G +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGR-QVHAMVVRMGYEKDVFTANALVDMYVKMGRV 253
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D A EKMP + DV W L++ C ++G+ R E++ Q+ S GLVP
Sbjct: 254 DIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQMKSS--------GLVP 301
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G AIE+L ++ + ++ S +++AC A A + + +H + + +
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 334
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF M+ RDL W+ +I+G + G ++A IF
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 394
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GL + V + ++L + ++++ G + ++D
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASL-EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 453
Query: 562 YLDEALEFIEK 572
L +A+ E+
Sbjct: 454 CLSDAIRVFEE 464
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T SQ + A+AL H H L S S N ++ YS+C A VF +
Sbjct: 6 TISQQLTRYAAAQAL--LPGAHLHANLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC---SALGDVV 528
+ SW +++T ++ NGL A+ F + G+ ++ + V C + LG V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCC-NEFALPVVLKCVPDAQLGAQV 122
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M D + ++ V M G G++D+A ++ E + W LM+
Sbjct: 123 HAMAMATGFGSDVFVANAL------VAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 231/413 (55%), Gaps = 9/413 (2%)
Query: 370 SRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA 429
SRS + + L + ++AI++ + ++ + D S L+ AC A E+
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
K VH H+ + V N ++ Y++C S++DA FS + ER + SW MI G A++
Sbjct: 530 KQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQH 589
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G G+ A+D+F + G+ P+ V SAC+ G V + +FESM + +GI + +H
Sbjct: 590 GHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEH 649
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
Y ++D+LG G L++A+E + MP + + VW L+ R+H + ELG AE + L+
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLE 709
Query: 610 PSR-------LNEKSKAGLVP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSH 660
P + N + AG+ +L K+ KK + + +E++ KVH + GD SH
Sbjct: 710 PEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSH 769
Query: 661 PETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPA 720
P T IY + L M +AGY+P LHD+D+ KE L HSERLAV+ L+S+P+
Sbjct: 770 PMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPS 829
Query: 721 RAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
APIR+ KNLR+C DCH A K ISKIV RE+IIRD RFHHF +G CSC DYW
Sbjct: 830 GAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 396 EVLGLLEKQCISVDLPT---FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+ +G+ + S + P FS ++ AC ++ LE + VH V R V T N ++
Sbjct: 188 DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALV 247
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+ ++ A +VF M D+ SW+ I+G +G A+++ Q K +GL P+
Sbjct: 248 DMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVF 307
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI--VDMLGSTGYLDEALEFI 570
V AC+ G G M K V +V++ VDM G+LD+A +
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVK---AVADFDEFVAVGLVDMYAKHGFLDDARKVF 364
Query: 571 EKMPMEPDVDVWEKLMNLC 589
+ MP D+ +W L++ C
Sbjct: 365 DFMP-RRDLILWNALISGC 382
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDL--PTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G +G+ E + + + K+ + +D+ T + ++++ ++A+ + VH E+
Sbjct: 379 ISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKI 438
Query: 439 -LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
LLS V NG++ Y +C +D A VF D+ S TM+T ++ GEDA+
Sbjct: 439 GLLSDSHV--INGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIK 496
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F Q + GL+PD + + +AC++L
Sbjct: 497 LFVQMLRKGLEPDSFVLSSLLNACTSL 523
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMT----ERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ +Y +D+A +F ER+ SW+TMI+ + KN DA+ +F
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +G +P++ F V +AC+ D+ V G + KD ++ VD
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANAL------VD 248
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
M G ++ A EKMP DV W ++ C HG+ R E++ Q+ S
Sbjct: 249 MYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGH---DHRALELLLQMKSS---- 300
Query: 616 KSKAGLVP 623
GLVP
Sbjct: 301 ----GLVP 304
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 66/129 (51%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G A+E+L ++ + ++ T S +++AC A A + +H + + ++
Sbjct: 278 ISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVA 337
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF M RDL W+ +I+G + +G + + +F +
Sbjct: 338 DFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHR 397
Query: 502 FKQAGLKPD 510
++ GL D
Sbjct: 398 MRKEGLDLD 406
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + G +++L +H H+ L S L N +L +YS C A +VF +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHL--LKSGLLAGFSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ SW +++T ++ NG+ DA+ F + G+ P ++ + V C+ DV
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV-PCNEFALPVVLKCAP--DV---- 116
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEA 566
F + + + H V ++V + G G +DEA
Sbjct: 117 -RFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEA 154
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 217/367 (59%), Gaps = 9/367 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+QAC + ALE + VH ++E ++ N ++ MYS C ++ A+S+F M ER+
Sbjct: 277 LLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERN 336
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ SW MI+GFA +G G +A++ F Q +Q G+ PDDQ GV SACS G V +G++ F+
Sbjct: 337 VVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFD 396
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
MSK +GI P++ HY +VD+LG G LD+A + I M ++PD +W L+ CR+H +
Sbjct: 397 RMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHA 456
Query: 596 ELGDRCAEIVEQLDPSR-------LNEKSKAG--LVPVNASELAKEKENKKLASQNLLEV 646
LG+R + +L LN S G + + KEK + + +E+
Sbjct: 457 TLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIEL 516
Query: 647 RSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHS 706
+ KVHE+ D HP TD+IY ++ + Q+K AGY+ E LH++ E K L HS
Sbjct: 517 KGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHS 576
Query: 707 ERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
E+LA++ G+L++P IR+ KNLR+C DCH+ K++S RE++IRD RFHHF++G
Sbjct: 577 EKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHFREGQ 636
Query: 767 CSCRDYW 773
CSC YW
Sbjct: 637 CSCNGYW 643
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVER--------LLSPLRVSTYNGILKMYSECDSMDDAF 465
S +M++C +L +H + R LL+ L + +YS CD ++A
Sbjct: 172 SFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTL--------MDLYSCCDKFEEAC 223
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA--GLKPDDQIFIGVFSACSA 523
VF + + D SW+ +I+ N DA+ +F + G +PDD + + AC+
Sbjct: 224 KVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACAN 283
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
LG + G + +++G ++ S++ M G L++A ++M E +V W
Sbjct: 284 LGALEFGE-RVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMD-ERNVVSWS 341
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQL 608
+++ MHG G E EQ+
Sbjct: 342 AMISGFAMHG---YGREAIEAFEQM 363
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 234/392 (59%), Gaps = 14/392 (3%)
Query: 396 EVLGLLEKQC-----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+ LGL K I + T S ++ AC A ++ K +H V R+ V
Sbjct: 278 DALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTS 337
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MYS+C ++ A F + E+++ SW MITG+ +G G++A+DIF++ ++G P+
Sbjct: 338 VVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPN 397
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
FI V +ACS G + +G + +M K +GI P ++HY +VD+LG G LDEA I
Sbjct: 398 YITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLI 457
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP 623
++M ++PD +W L++ CR+H N+EL + A+ + +LD + N ++AG+
Sbjct: 458 KEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWK 517
Query: 624 --VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
L K + +K + +E++ + H + GD SHP+ +IY+ + L +M+EAG
Sbjct: 518 DVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAG 577
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P T VLHD+D+E K AL HSE+LA++ L++S + I ++KNLRVC DCH+A+K
Sbjct: 578 YVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIK 637
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+I+KI RE+I+RD +RFHHFKDG CSC DYW
Sbjct: 638 LITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH----------VERLLSPLRVST- 447
G + + L F +L+ A G A A++EA A+ + L L V T
Sbjct: 165 GYVRNNLVYPSLALFRKLI-ASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTG 223
Query: 448 -------YNGILKMYSECDSMD--DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
N +L Y++ D A VF M E+D+ SW++MI +A+NG+ DA+ +
Sbjct: 224 LDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGL 282
Query: 499 FSQF--KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+ + +K + + AC+ G + G + + G+ ++ S+VDM
Sbjct: 283 YRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVR-MGLEENVYVGTSVVDM 341
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G ++ A + +K+ E ++ W ++ MHG+
Sbjct: 342 YSKCGRVEMARKAFQKIK-EKNILSWSAMITGYGMHGH 378
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 230/406 (56%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +E +++ ++ + + F+ + AC +L+ + +H V RL
Sbjct: 394 MISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLG 453
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MYS C ++ A SVF M D SW+ MI A++G G A+++F
Sbjct: 454 HDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFE 513
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + PD F+ + +AC+ G + EG +F++M YGI P HY ++D+L
Sbjct: 514 QMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRA 573
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------- 610
G +A I+ MP E +WE L+ CR+HGN+ELG + A+ + +L P
Sbjct: 574 GMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILS 633
Query: 611 ---SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ L + + V + L +E+ KK + +EV + VH + D HPE +Y
Sbjct: 634 NMYAALGQWDEVARVRL----LMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVY 689
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
++ L +MK+ GY+P+T+FVLHD++ E KE +L HSE+LAV +G++ P A IR+
Sbjct: 690 TYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVF 749
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH+A K ISK+V RE+++RD KRFHHFK+G CSC +YW
Sbjct: 750 KNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 61/328 (18%)
Query: 327 SRRQYQQNPNEGQYQS-----YSGNIQNG--MMASQVLNNCKHEDDFAEASRSSQNNGTL 379
+R+ + + P Y+ +G ++N + A ++L+ + D A +
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNA--------- 253
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK----ALEEAKAVHEH 435
+ G V+ G +EA + + I D T++ L+ ACG + VH +
Sbjct: 254 -MISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGY 312
Query: 436 VERLLS----------------------------------PLR-VSTYNGILKMYSECDS 460
+ R + P+R + ++N +L Y
Sbjct: 313 ILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQR 372
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+++A S+FS M ER++ +W MI+G A+NG GE+ + +F+Q K GL+P D F G +A
Sbjct: 373 IEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITA 432
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS LG + G S G + +++ M G ++ A MP V
Sbjct: 433 CSVLGSLDNGQ-QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVS 491
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQL 608
W ++ HG+ G + E+ EQ+
Sbjct: 492 -WNAMIAALAQHGH---GVKAIELFEQM 515
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 451 ILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L YS ++ A +F + +T RD S++ MIT ++ G A+++F Q K+ G
Sbjct: 77 LLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL 136
Query: 509 PDDQIFIGVFSACSALGDVVEG--MLHFESMSKDYGIVPSM 547
PD F V SA S + D MLH E + ++PS+
Sbjct: 137 PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSV 177
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 216/371 (58%), Gaps = 11/371 (2%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
S ++ AC LE K+VH + + + ++ MY +C S++DA F M E
Sbjct: 314 SSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE 373
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG--LKPDDQIFIGVFSACSALGDVVEGM 531
R+L +W+ MI G+A G + AV +F + + P+ F+ V SACS G V GM
Sbjct: 374 RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGM 433
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
FESM YGI P +HY +VD+LG G +++A +FI+KMP+ P V VW L+ +M
Sbjct: 434 EIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKM 493
Query: 592 HGNLELGDRCAEIVEQLDP------SRLNEKSKAGLVPVNASELAKEKEN---KKLASQN 642
G ELG A+ + +LDP L+ A A+ + KE ++ KK A +
Sbjct: 494 FGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCS 553
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+ + VH ++A DTSH +I A++ LR +M+ AGYIP+T F L D+++E K +
Sbjct: 554 WITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEV 613
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE++A++ GL+S PA PIRI KNLR+CGDCHSA+K IS IVGRE+I+RD FH F
Sbjct: 614 WYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRF 673
Query: 763 KDGLCSCRDYW 773
+D CSCRDYW
Sbjct: 674 RDNQCSCRDYW 684
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V EG+ +A+ + +L TF + AC A L + +H V + V
Sbjct: 185 VLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADV 244
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S NG++ Y +C + + +FS +++ + SW +MI + +N E A +F + ++
Sbjct: 245 SVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKE 304
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++P D + V SAC+ L V+E +++ +V ++ ++VDM G G +++
Sbjct: 305 GIEPTDFMVSSVLSACAGL-SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 363
Query: 566 ALEFIEKMPMEPDVDVWEKLM 586
A ++MP E ++ W ++
Sbjct: 364 AERAFDEMP-ERNLVTWNAMI 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL-SPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+ + L+++ + +A H + + L +PL YN ++ MYS+ D + A + S
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R + +W +I G +NG A+ FS ++ ++P+D F F A +L + G
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++ G + + S DM G +EA + ++MP E ++ W ++
Sbjct: 128 K-QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAYLS 182
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ A+ + + I + TF +A G ++ K VH +
Sbjct: 80 IAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ 139
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V MYS+ ++A +F M ER++ +W+ ++ G +DA+ F +
Sbjct: 140 ISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE 199
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
F+ G +P+ F +AC+
Sbjct: 200 FRHEGWEPNLITFCAFLNACA 220
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 234/400 (58%), Gaps = 12/400 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQ--CISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LLSP 442
++ G+ +A+E+ + KQ + + T S + AC AL + +H ++ R
Sbjct: 140 MQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDS 199
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ N ++ MY++ +D A VF N+ +++ SW +++TG+ +G G++A+++F +
Sbjct: 200 AFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEM 259
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++ GL+PD + V ACS G + +G+ F SMSK++G++P +HY +VD+LG G
Sbjct: 260 RRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGR 319
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
L+EA+E IE M MEP VW L++ CR+H N+ELG+ A+ + +L+ + +
Sbjct: 320 LNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNI 379
Query: 623 PVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
NA L K +K + ++ + + D +HP++ +IY ++R L
Sbjct: 380 YANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSL 439
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++K GY+PET F LHD+D E K + L HSE+LA+++G+L S APIRI KNLRVC
Sbjct: 440 TQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVC 499
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A+ IS I+ E+I+RD+ RFHHFK G CSC YW
Sbjct: 500 GDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + ++ AC A KAVH R S + N ++ MY++C +D+A VF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+D+ SW+ M+ G+++ G EDA+ +F + ++ ++ + + V +A + G
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131
Query: 529 EGMLHFESM 537
E + F M
Sbjct: 132 ETLDVFREM 140
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 242/433 (55%), Gaps = 26/433 (6%)
Query: 364 DDFAEASRSSQNNGTLEQLD------------GLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A R +QL+ G ++G + + + +++
Sbjct: 208 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHF 267
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ K VH H+ + L N IL MY++ SM DA VF +
Sbjct: 268 TYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV 327
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ +W++M+T FA+ GLG +AV F + ++ G+ + F+ + +ACS G V EG
Sbjct: 328 DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGK 387
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M K+Y + P + HYV++VD+LG G L++AL FI KMPM+P VW L+ CRM
Sbjct: 388 QYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRM 446
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N ++G A+ V +LDP + L + AS ++ K KK +
Sbjct: 447 HKNAKIGQFAADHVFELDPD--DTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPA 504
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ + VH + A D +HP +++IY + Q+++AGY+P T +VL +D++ ++
Sbjct: 505 CSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQA 564
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE++A++ L++ P A IRIMKN+R+CGDCHSA + ISK+ RE+++RD RFH
Sbjct: 565 KLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFH 624
Query: 761 HFKDGLCSCRDYW 773
HF G CSC DYW
Sbjct: 625 HFSSGSCSCGDYW 637
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LGLL P TF+ L++A G + + + +H + V + +L
Sbjct: 148 EALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALL 207
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C MD A +VF + ++ SW+ +I GFA+ G GE + +F++ ++ G +
Sbjct: 208 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHF 267
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFI 570
+ VFSA + +G + +G M K + +V +I+DM +G + +A +
Sbjct: 268 TYSSVFSAIAGIGALEQGKWVHAHMIKSG---ERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+++ + DV W ++ +G
Sbjct: 325 DRVD-KKDVVTWNSMLTAFAQYG 346
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ L+ AC ++L++A+A+H H+ V N ++ +Y +C ++ DA VF M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF-----SACSALGDV 527
RD+ SW ++I G+A+N + ++A+ + + KP+ F + SA S +G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 528 VEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ + D YV +++DM G +D A+ +++ + V W L
Sbjct: 187 IHALTVKYDWHDDV--------YVGSALLDMYARCGRMDMAIAVFDQLESKNGVS-WNAL 237
Query: 586 M 586
+
Sbjct: 238 I 238
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 217/371 (58%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++QAC ALE+ K +H ++ R + N ++ MY C + VF NM
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM 347
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+++I+ + +G G+ A+ IF G P FI V ACS G V EG
Sbjct: 348 KNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ FESM Y I P M+HY +VD+LG LDEA++ IE M EP VW L+ CR+
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRI 467
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H N+EL +R + ++ +L+P + + ++K + +L + + +KL +
Sbjct: 468 HCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCS 527
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV+ KV+ + + D +P+ ++I+AL+ L +MK GY+P+T VL+D+D+E KE +
Sbjct: 528 WIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIV 587
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
L HSE+LAV+ GL+++ IRI KNLR+C DCH+ K ISK RE+++RD RFHHF
Sbjct: 588 LGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHF 647
Query: 763 KDGLCSCRDYW 773
KDG+CSC DYW
Sbjct: 648 KDGVCSCGDYW 658
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 406 ISVDLPTFSQLMQACG----DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
I D T++ +++AC L++ K +H H+ R + +L +Y++ S+
Sbjct: 175 IPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSV 234
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS--QFKQAGLKPDDQIFIGVFS 519
A SVF M ++ SW MI FAKN + A+++F + P+ + V
Sbjct: 235 SYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQ 294
Query: 520 ACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
AC+ L + +G ++H + + I+P + +++ M G G + + M
Sbjct: 295 ACAGLAALEQGKLIHGYILRRGLDSILPVLN---ALITMYGRCGEILMGQRVFDNMK-NR 350
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
DV W L+++ MHG G + +I E +
Sbjct: 351 DVVSWNSLISIYGMHG---FGKKAIQIFENM 378
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 22/155 (14%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP--TFSQLMQACGDAKALEEAKAV 432
NN L Q L K G +K+AI +L C + TF L+ +C +L + V
Sbjct: 49 NNNQLIQ--SLCKGGNLKQAIHLL------CCEPNPTQRTFEHLICSCAQQNSLSDGLDV 100
Query: 433 HEHVERLLS------PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
H RL+S P + ++ MY E S+D A VF ER + W+ +
Sbjct: 101 HR---RLVSSGFDQDPFLATK---LINMYYELGSIDRARKVFDETRERTIYVWNALFRAL 154
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A G G++ +D++ Q G+ D + V AC
Sbjct: 155 AMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKAC 189
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 233/403 (57%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK EA V + ++ + + P S ++ AC + A + VH V L
Sbjct: 146 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 205
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY++C + A +FS M RD+ SW ++I G A++G E A+ ++
Sbjct: 206 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 265
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G+KP++ F+G+ ACS +G V +G F+SM+KDYGI PS++HY ++D+LG +
Sbjct: 266 EMVSHGVKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 325
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE-IVEQLDPSRLNEKSKA 619
G LDEA I MP PD W L++ C+ G ++G R A+ +V P +
Sbjct: 326 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILL 385
Query: 620 GLVPVNASELAKEKE-NKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALI 670
+ +AS K E +KL + +EVR + + AG+TSH + I+ L+
Sbjct: 386 SNIYASASLWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLL 445
Query: 671 RGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +M+ GY+P+T ++LHD+D++ KE+ L HSER AV++GLL + PIRI+KN
Sbjct: 446 KKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 505
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
LRVCGDCH LK IS+I RE+I+RDA R+HHFK G CSC D+
Sbjct: 506 LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 548
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN-------GILKMYSECDSMDDA 464
FS L++AC + +++ K VH H VS Y+ ++ MY++C +D A
Sbjct: 44 VFSALVKACANLGSIKLGKQVHCH-------FIVSEYSNDDVVKSSLVDMYAKCRLLDCA 96
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+VF ++ ++ SW M++G+AK+G E+A+++F + L
Sbjct: 97 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNL 139
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 239/403 (59%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G KEA+E+ L++ + D TF L+ AC A+ VHE++ R
Sbjct: 190 MISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNC 249
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MYS C ++ A VF +M E+++ +W MI+G+ +G G A+++F+
Sbjct: 250 FDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFN 309
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G +P++ F+ V SAC+ G V EG F +M ++YG+VPS++H V +VDMLG
Sbjct: 310 EMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRA 369
Query: 561 GYLDEALEFIEKM-PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G+L+EA +FI+ P EP VW ++ C+MH N +LG AE + ++P
Sbjct: 370 GHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVML 429
Query: 620 GLVPVNASELAKEKENKKLASQNLL---------EVRSKVHEYRAGDTSHPETDKIYALI 670
+ A + + ++ + + +N L +V KV+ + GD SHP+T++IY +
Sbjct: 430 SNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYL 489
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++ +EAGYIP + V+H++++E +E AL HSE+LA++ GLL + + IRI+KNL
Sbjct: 490 DELMSRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNL 549
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCH+A+K IS I RE+ +RD RFHHFKDG CSC+DYW
Sbjct: 550 RMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 19/222 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS ++++ D A + +H HV L ++ Y++ + A VF M
Sbjct: 120 TFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKM 179
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+ + +W++MI+G+ +NG G++AV++F + G+KPD F+ + SAC+ +G + G
Sbjct: 180 PEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGF 239
Query: 532 LHFESMSK---DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
E +++ D +V ++++M G + +A E + M E ++ W +++
Sbjct: 240 WVHEYIARNCFDLNVVLG----TALMNMYSRCGNVSKAREVFDSME-EKNIVAWTAMISG 294
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
MHG+ G + E+ NE S G P N + +A
Sbjct: 295 YGMHGH---GSQAIEL--------FNEMSFDGPRPNNVTFVA 325
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 244/422 (57%), Gaps = 19/422 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S +S N + G + G AI + + Q +S + T + ++ AC
Sbjct: 374 DESPEKSLASWN----AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428
Query: 424 KALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL K VH + ERL S + VST ++ MY++C S+ +A +F M ++++ +W+
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVST--ALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MITG+ +G G++A+ +F + Q+G+ P F+ + ACS G V EG F SM+ +Y
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNY 546
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G P +HY +VD+LG G L ALEFIE+MP+EP VW L+ C +H N E+ +
Sbjct: 547 GFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVA 606
Query: 602 AEIVEQLDPSRL-------NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHE 652
++ + QLDP + N S P AS ++ K+++ K L+E+ + +
Sbjct: 607 SKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYV 666
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPET-RFVLHDIDQEGKEEALLAHSERLAV 711
+ +GD SHP+ I+ ++ L +M+EAGY ET LHD++ E KE + HSE+LA+
Sbjct: 667 FTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAI 726
Query: 712 SHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRD 771
+ GL+S+ IRI+KNLRVC DCH+A K ISKI R +++RDA RFHHFK+G+CSC D
Sbjct: 727 AFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGD 786
Query: 772 YW 773
YW
Sbjct: 787 YW 788
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L+ S + +Y + + A +F E+ L SW+ MI+G+ +NGL + A+ +F +
Sbjct: 348 LQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM 407
Query: 503 KQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVS--IVD 555
L P+ + SAC+ LG + V G++ E + + YVS +VD
Sbjct: 408 -MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV--------YVSTALVD 458
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
M G + EA + + M ++ +V W ++ +HG+
Sbjct: 459 MYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH 496
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 419 ACGDAKALEEAKA---VHEH--VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
A A LE+ + +H H V+ + S L V + I+ +Y + + A VF M E
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVGS--AIVDLYFKFTRAELARKVFDVMPE 176
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD W+TMI+GF++N ED++ +F GL D V +A + L + GM
Sbjct: 177 RDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGM 234
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKPDDQIFIGVFSACSALG 525
+F+ +++ DL ++ +I GF+ NGL + ++ +++ K L+PD+ + SA S L
Sbjct: 68 LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLE 127
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
D G +LH S+ G+ ++ +IVD+ + A + + MP E D +W
Sbjct: 128 DERVGVLLHAHSIVD--GVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNT 184
Query: 585 LMN 587
+++
Sbjct: 185 MIS 187
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 233/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ + KEA+E+ ++ + D T ++ AC ALE + + +++R
Sbjct: 322 MIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK 381
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY +C +D A S+F M++RD +W MI G A NG GE A+D+FS
Sbjct: 382 IKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFS 441
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+A + PD+ +IGV SAC+ G V +G +F M+ +GI P++ HY +VD+L
Sbjct: 442 NMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARA 501
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L EA E IE MP++ + VW L+ CR++ ++ + + + +L+P N
Sbjct: 502 GRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD--NGAVYVL 559
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ ++ +K KK +L+E+ +VHE+ AGD SHP+T I A
Sbjct: 560 LCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAK 619
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K AGY P+ V DI +E KE ++ HSE+LA++ GL++SP IRI KN
Sbjct: 620 LDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKN 679
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+ K++SK+ RE+I+RD RFHHFK GLCSC+DYW
Sbjct: 680 LRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K GK +E+ + ++E + + T ++ AC K L K VH +V+ +
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 255
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE------------- 493
N ++ MY++C MD A +F +M RD+ SW T+++GF LGE
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGF--TNLGEIDVARNYFDKMPE 313
Query: 494 --------------------DAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+A+++F + +KPD+ + V +AC+ LG
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 365
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L + ALE + +H HV + V + +++MY C +D A VF
Sbjct: 117 DRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF 176
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ D+ +W+ +I+ + K G E++ +F + + P + V SACS L D+
Sbjct: 177 DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLR 236
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G S K+ + ++ +++DM G +D AL M D+ W +++
Sbjct: 237 TGK-KVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVS 293
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +F + E +L W+TMI G+++ + V ++ + + G+KPD F +F +
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 524 LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ G LH + +G+ ++ + ++V M G LD A + P + DV W
Sbjct: 131 DIALEYGRQLHGHVLK--HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITW 187
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLAS 640
+++ G E R ++E D L LV S+L + KK+ S
Sbjct: 188 NMIISAYNKVGKFEESRRLFLVME--DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 225/389 (57%), Gaps = 12/389 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ +E D + + ++ ACGD AL K +H ++ER + N ++
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C +D A VF NM RD+ SW MI+ + +G G DAV +FS+ + +GL PD
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ +ACS G + EG F+ M+ Y I P ++H +VD+LG G + EA +FI++
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQE 472
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVP-- 623
MPMEP+ VW L+ CR+H N ++G A+ + QL P + N +KAG
Sbjct: 473 MPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 532
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
N + K K KK + +EV +H + GD SHP++ +IY + L +MKE GY+
Sbjct: 533 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYV 592
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP---ARAPIRIMKNLRVCGDCHSAL 740
P++ LHD+++E KE L HSE+LA+ L+++ + IRI KNLR+CGDCH A
Sbjct: 593 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAA 652
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSC 769
K+IS+I RE+IIRD RFH F+ G+CSC
Sbjct: 653 KLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +E I+V G + + D TF +++AC + + K +H ++ +
Sbjct: 117 VNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTL 176
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
NG++ MY +C + +A V M+ RD+ SW++++ G+A+N +DA+++ + +
Sbjct: 177 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESV 236
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGY 562
+ D + A S E +++ + M G K VS M+G
Sbjct: 237 KISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMG----KKSLVSWNVMIGVYMKNAM 290
Query: 563 LDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
EA+E M EPD ++ C L LG + +E +L P+ L E +
Sbjct: 291 PVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 350
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
KV ++ L L +K Q++ D K L + VH + + LR ++
Sbjct: 23 KVTSSVPKLELDQKNSPKETAFMLGQVLDTYPDLKTL---RTVHSRI--ISEDLRYNSSL 77
Query: 450 GI--LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
G+ ++ Y+ + A VF + ER++ + MI + NG + + +F +
Sbjct: 78 GVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHV 137
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KPD F V ACS G++V G S +K G+ ++ +V M G G+L EA
Sbjct: 138 KPDHYTFPCVLKACSCSGNIVIGKKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEAR 196
Query: 568 EFIEKMPMEPDVDVWEKLM 586
+++M DV W L+
Sbjct: 197 LVLDEMSRR-DVVSWNSLV 214
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 244/422 (57%), Gaps = 19/422 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S +S N + G + G AI + + Q +S + T + ++ AC
Sbjct: 374 DESPEKSLASWN----AMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQL 428
Query: 424 KALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL K VH + ERL S + VST ++ MY++C S+ +A +F M ++++ +W+
Sbjct: 429 GALSIGKWVHGLIKSERLESNVYVST--ALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MITG+ +G G++A+ +F + Q+G+ P F+ + ACS G V EG F SM+ +Y
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNY 546
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G P +HY +VD+LG G L ALEFIE+MP+EP VW L+ C +H N E+ +
Sbjct: 547 GFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVA 606
Query: 602 AEIVEQLDPSRL-------NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHE 652
++ + QLDP + N S P AS ++ K+++ K L+E+ + +
Sbjct: 607 SKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYV 666
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPET-RFVLHDIDQEGKEEALLAHSERLAV 711
+ +GD SHP+ I+ ++ L +M+EAGY ET LHD++ E KE + HSE+LA+
Sbjct: 667 FTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAI 726
Query: 712 SHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRD 771
+ GL+S+ IRI+KNLRVC DCH+A K ISKI R +++RDA RFHHFK+G+CSC D
Sbjct: 727 AFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGD 786
Query: 772 YW 773
YW
Sbjct: 787 YW 788
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L+ S + +Y + + A +F E+ L SW+ MI+G+ +NGL + A+ +F +
Sbjct: 348 LQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM 407
Query: 503 KQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVS--IVD 555
L P+ + SAC+ LG + V G++ E + + YVS +VD
Sbjct: 408 -MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV--------YVSTALVD 458
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
M G + EA + + M ++ +V W ++ +HG+
Sbjct: 459 MYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGH 496
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 419 ACGDAKALEEAKA---VHEH--VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
A A LE+ + +H H V+ + S L V + I+ +Y + + A VF M E
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVGS--AIVDLYFKFTRAELARKVFDVMPE 176
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD W+TMI+GF++N ED++ +F GL D V +A + L + GM
Sbjct: 177 RDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGM 234
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKPDDQIFIGVFSACSALG 525
+F+ +++ DL ++ +I GF+ NGL + ++ +++ K+ L+PD+ + SA S L
Sbjct: 68 LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLE 127
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
D G +LH S+ G+ ++ +IVD+ + A + + MP E D +W
Sbjct: 128 DERVGVLLHAHSIVD--GVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNT 184
Query: 585 LMN 587
+++
Sbjct: 185 MIS 187
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 231/408 (56%), Gaps = 23/408 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ GK EA V ++ + D+ T L+ AC AL+ K H V
Sbjct: 408 VSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGI 467
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N ++ MY++C +D + +F M RD+ SW+TMI G+ +GLG++A +F
Sbjct: 468 ASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLD 527
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K +PDD FI + SACS G V EG F M+ YGI P M+HY+ +VD+L G
Sbjct: 528 MKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGG 587
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------- 610
+LDEA +FI+ MP++ DV VW L+ CR+H N++LG + + +++QL P
Sbjct: 588 FLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSN 647
Query: 611 -----SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
R +E ++ ++ KE+ KK + +E+ +H + GD SH ++ +
Sbjct: 648 IFSAAGRFDEAAEVRII-------QKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSE 700
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY + + + + GY +T FVL D+++E KE+ALL HSE+LA++ G+L+ I
Sbjct: 701 IYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIF 760
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLRVCGDCH+ +K ++ + R +I+RDA RFHHFK+G CSC D+W
Sbjct: 761 VTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G V G++ EA + + Q + PT + ++AC + L K +H + +
Sbjct: 308 GFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLH 367
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
++ N +L MY++ +D A ++F M +D S+ +++G+ +NG ++A +F +
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ ++PD + + ACS L + G S+ GI +++DM G
Sbjct: 428 QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGR 486
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+D + + + MP D+ W ++ +HG
Sbjct: 487 IDLSRQIFDVMPAR-DIVSWNTMIAGYGIHG 516
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF +++AC L A+AVH H R L + L VST ++ +Y++C S A +VF
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVST--ALVDVYAKCASFRHAATVFR 188
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M RD+ +W+ M+ G+A +G D + Q P+ + + + G + +
Sbjct: 189 RMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQ 247
Query: 530 G-MLHFESMS-------KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
G +H S+ KD +V + +++DM G+L A E M + +V
Sbjct: 248 GRAVHAYSVRACSLHDHKDGVLVGT-----ALLDMYAKCGHLVYASRVFEAMAVRNEV-T 301
Query: 582 WEKLMN---LC-RMHGNLEL-GDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENK 636
W L+ LC RM L D A+ + L P+ + +A N S+L K+
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRAC---ANLSDLCLGKQLH 358
Query: 637 KLASQN 642
L +++
Sbjct: 359 ALLAKS 364
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 7/204 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G GK + I L L++ + + T L+ AL + +AVH + R
Sbjct: 201 MLAGYALHGKYSDTIACLLLMQDD-HAPNASTLVALLPLLAQHGALSQGRAVHAYSVRAC 259
Query: 441 SPLR----VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
S V +L MY++C + A VF M R+ +W ++ GF G +A
Sbjct: 260 SLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAF 319
Query: 497 DIFSQFKQAGLKPDDQIFIG-VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+F GL + AC+ L D+ G ++ G+ + S++
Sbjct: 320 SLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGK-QLHALLAKSGLHTDLTAGNSLLS 378
Query: 556 MLGSTGYLDEALEFIEKMPMEPDV 579
M G +D+A ++M ++ V
Sbjct: 379 MYAKAGLIDQATTLFDQMVVKDTV 402
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 242/421 (57%), Gaps = 15/421 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E + +S T+ + V+ G+ AI + ++ + + T L+ AC
Sbjct: 89 DNMTERNSNSVTWNTM--ISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHL 146
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
AL+ + +H ++ + V N ++ MY +C +++ A VF ++ +++ W+++I
Sbjct: 147 GALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSII 206
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G NG GE+A+ F ++ G+KPD F+G+ S CS G + G +F M YG+
Sbjct: 207 VGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGL 266
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
P ++HY +VD+LG GYL EALE I MPM+P+ V L+ C++H + +LG++ +
Sbjct: 267 EPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQ 326
Query: 604 IVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHE 652
+ +LDP + + L + AS +L ++ K + +EV + VHE
Sbjct: 327 QLLELDPC--DGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHE 384
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ AGDTSHP+ +I A + + ++K G++P T VLHDI++E KE A+ HSER+AV+
Sbjct: 385 FVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVA 444
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GL+S+P IR++KNLR C DCHSA+K+IS RE+I+RD KRFHHF++G CSC DY
Sbjct: 445 FGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDY 504
Query: 773 W 773
W
Sbjct: 505 W 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+FS ++++C + + +A H + ++ + G+L Y++ +++A ++F NM
Sbjct: 32 SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNM 91
Query: 472 TERDLTS--WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
TER+ S W+TMI+ + + G A+ +F Q + +KP + + + SAC+ LG +
Sbjct: 92 TERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDM 151
Query: 530 G-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +H +K I + + +++DM G L+ A++ + ++ W ++
Sbjct: 152 GEWIHGYIRTKRLKIDVVLGN--ALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSII 206
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 235/403 (58%), Gaps = 11/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V+ + EA+ + ++ + + + T ++ AC ALE + +HE+V ++
Sbjct: 214 MITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQ 273
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MY +C S++DA SVF M RD +W MI +A + G +A+ +F
Sbjct: 274 LDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFE 333
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K+ G+KPDD F+GV ACS G V EG+ +F+SM +++G+VP +KHY + D+L +
Sbjct: 334 EMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARS 392
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD A EFI+++P++P +W L++ C G+ +LG + E + +LD S +
Sbjct: 393 GQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFS 452
Query: 621 LVPVN---------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ N +L EK K+ + +EV ++VHE+ AGD HP++ ++
Sbjct: 453 NLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVD 512
Query: 672 GLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
G+ Q+K AGY+P T V H ++ +E K +L HSE+LA+S GLL++ +R++KNL
Sbjct: 513 GVIEQLKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNL 572
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHS K++S + R +I+RD RFHHF+DG+CSC DYW
Sbjct: 573 RVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA V + ++ ++ D TF L++AC A+A EE + H ++ + +
Sbjct: 124 EEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTL 183
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+EC A ++F + + S++ MIT ++ +A+ +F + + GLK
Sbjct: 184 INMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTS 243
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
I V SAC+ LG + G E + K + +K +++DM G G L++A+ +
Sbjct: 244 VTLISVLSACALLGALELGRWIHEYVRK-VQLDSLVKVNTALIDMYGKCGSLEDAISVFQ 302
Query: 572 KM 573
M
Sbjct: 303 GM 304
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 218/371 (58%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC LE + VH+++ R VS N ++ M+S+C +D A +F +M
Sbjct: 284 TILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM 343
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ +DL SW++M+ GFA +GLG +A+ F + L+PD+ FIGV +ACS G V EG
Sbjct: 344 SYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGK 403
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F + YG+ +HY +VD+L G L EA EFI MP++PD +W ++ CR+
Sbjct: 404 KLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRV 463
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
+ NLELG+ A + +L+P S + K K EL EK +K +
Sbjct: 464 YNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCS 523
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+ + + H + AGD SHPE +I ++R +R ++K AGY+ +T VL +ID KEE++
Sbjct: 524 SVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESV 583
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA+ +GLL S I I+KNLRVC DCH+ +K++SKI R++ +RD RFHHF
Sbjct: 584 SQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHF 643
Query: 763 KDGLCSCRDYW 773
KDG CSCRDYW
Sbjct: 644 KDGSCSCRDYW 654
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +K EA+ + +E+ S D T + L+ AC + K L +H H+ +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++C + A VF ++++D+ +W +I G+ KN +A+ +F
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 501 QFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVD 555
+ + ++P++ + V SAC+ LGD+ G DY H V S++D
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETG-----RWVHDYITRTQKGHSVSLNNSLID 325
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G +D A + M + D+ W ++N +HG
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHG 362
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L++ C + K +H V + + + +L MY+ C + A +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M R+ W +MI+G+ KN +A+ ++ + ++ G PD+ + SAC+ L D+
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
GM LH D I + ++V+M G L A + +K+ + DV W L+
Sbjct: 198 VGMKLHSHIREMDMKICAVLGS--ALVNMYAKCGDLKTARQVFDKLS-DKDVYAWSALI 253
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 231/405 (57%), Gaps = 12/405 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISV--DLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G+ +A+++ + KQ S+ + T S + AC L + +H + R
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510
Query: 439 LLSPLRVSTY-NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ V N ++ MYS+ +D A +VF NM R++ SW +++TG+ +G GE+A+
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALH 570
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F Q ++ G D F+ V ACS G V +GM++F M K +GI P +HY +VD+L
Sbjct: 571 LFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLL 630
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------- 610
G G L+EA+E I+ M MEP VW L++ R+H N+ELG+ A + +L
Sbjct: 631 GRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYT 690
Query: 611 --SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S L ++ L K +K + ++ + + GD SHPE+++IY
Sbjct: 691 LLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYN 750
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+ L ++K+ GY+P+T F LHD+D E K + L HSE+LAV++G+L++ PIRI K
Sbjct: 751 LLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHK 810
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+CGDCHSAL IS I+ E+++RD+ RFHHFK G CSCR YW
Sbjct: 811 NLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G EA++V ++ + ++ T + L+ C AL K H +V + +
Sbjct: 342 IAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNIL 401
Query: 442 PLR-------VSTYNGILKMYSECDSMDDAFSVFSNMTERD--LTSWDTMITGFAKNGLG 492
L + NG++ MY++C S A S+F ++ +D + +W MI G+A++G
Sbjct: 402 NLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEA 461
Query: 493 EDAVDIFSQ-FKQ-AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
DA+ +F+Q FKQ LKP+ AC+ LG++ G LH ++ + S
Sbjct: 462 NDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNEN---ESEVL 518
Query: 550 YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
YV ++DM +G +D A + M + +V W LM MHG
Sbjct: 519 YVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMHG 563
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFS 466
D T ++ AC AL+ K VH R L+ + V N ++ MY++C M++A
Sbjct: 233 DAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVG--NALVSMYAKCSKMNEANK 290
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF + ++D+ SW+ M+TG+++ G + A+ +F ++ +K D + V + + G
Sbjct: 291 VFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGH 350
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
E + F M + YG+ P++ S++ S G L
Sbjct: 351 GFEALDVFRQM-QLYGLEPNVVTLASLLSGCASVGAL 386
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDL----TSWDTMITGFAKNGLGEDAVDIFS 500
V ++N ++ YS+ S D A S+F M E D+ +W +I G+A+ G G +A+D+F
Sbjct: 300 VVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFR 359
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
Q + GL+P+ + S C+++G ++ G
Sbjct: 360 QMQLYGLEPNVVTLASLLSGCASVGALLYG 389
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++ACG+ +L +VH V V N I+ MY C ++DDA +F +
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 472 TER---DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-----LKPDDQIFIGVFSACSA 523
ER D+ SW++++ + + G A+ I F+ L+PD + + AC++
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRI--AFRMGNHYSLKLRPDAITLVNILPACAS 246
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ + G S G+V + ++V M ++EA + E + + DV W
Sbjct: 247 VFALQHGK-QVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVSWN 304
Query: 584 KLMN 587
++
Sbjct: 305 AMVT 308
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+P S L Q K L AK H+ + ++ + Y EC + +A S+
Sbjct: 31 IPLISLLRQC----KTLINAKLAHQQI---FVHGFTEMFSYAVGAYIECGASAEAVSLLQ 83
Query: 470 NMTERDLTS--WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
+ T W+ +I K GL +D + + Q ++ G PD F V AC + +
Sbjct: 84 RLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSL 143
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP--DVDVWEKL 585
G ++ G+ ++ SIV M G G LD+A + +++ D+ W +
Sbjct: 144 RHGA-SVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSI 202
Query: 586 M 586
+
Sbjct: 203 L 203
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 236/404 (58%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEK-QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EAI+ ++E+ + I + T+ ++ A AL++ +H + +
Sbjct: 423 ITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNC 482
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY +C ++DA S+F + + W+ +I+ +G GE A+ +F
Sbjct: 483 LFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFK 542
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G+K D F+ + SACS G V E F++M K+Y I P++KHY +VD+ G
Sbjct: 543 DMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRA 602
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
GYL++A + MP++ D +W L+ CR+HGN ELG ++ + ++D +
Sbjct: 603 GYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLS 662
Query: 614 ----NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N G V V + LA+++ +K + + V S V + AG+ SHP+ +IY
Sbjct: 663 NIYANVGKWEGAVKVRS--LARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEE 720
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+R L A+MK GY+P+ FVL D++++ KEE L +HSERLA+ G++S+P ++PIRI KN
Sbjct: 721 LRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKN 780
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K ISKI RE+I+RD+ RFHHFKDG+CSC DYW
Sbjct: 781 LRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSV 467
DL T L G +AVH V R + + N ++ MY++ S+D A +V
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACSALGD 526
F + RD+ SW+T+ITG+A+NGL +A+D ++ ++ + P+ ++ + A S +G
Sbjct: 408 FEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGA 467
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ +GM + K+ + + ++DM G G L++A+ ++P E V W ++
Sbjct: 468 LQQGMKIHGRLIKN-CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAII 525
Query: 587 NLCRMHGN 594
+ +HG+
Sbjct: 526 SSLGIHGH 533
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G V EA+ VL ++ + + +D T S ++ C + + VH +V +
Sbjct: 219 MISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHG 278
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S + VS N ++ MYS+ + DA VF M RDL SW+++I + +N A+
Sbjct: 279 LESDVFVS--NALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGF 336
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G++PD + + S L D G + + + + ++V+M
Sbjct: 337 FKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYA 396
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +D A E++P DV W L+
Sbjct: 397 KLGSIDCARAVFEQLP-SRDVISWNTLIT 424
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
Query: 386 VKEGKVKEAIE-VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
V+ G+ +++++ V LL + D TF +++AC +L + + +H V ++
Sbjct: 125 VRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHD 181
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ +YS +++ A VF +M RD+ SW+ MI+GF +NG +A+ + + K
Sbjct: 182 VYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKT 241
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+K D + C+ DVV G+L + K +G+ + ++++M G L
Sbjct: 242 EEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK-HGLESDVFVSNALINMYSKFGRLQ 300
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+A + M + D+ W ++
Sbjct: 301 DAQRVFDGMEVR-DLVSWNSII 321
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 261/506 (51%), Gaps = 32/506 (6%)
Query: 289 GQHQQALSGHYS-GNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNI 347
G+H +A S Y G+ N + ++ + + RQ + + + ++
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI-FDAHV 348
Query: 348 QNGMM-----------ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIE 396
NG++ A +V C D A S + L Q D EG +K +E
Sbjct: 349 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT----ALSQCDH--GEGAIKLFME 402
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+L ++ + D S L+ AC A E+ K VH H+ + N ++ Y+
Sbjct: 403 ML----RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 458
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C S++DA FS++ ER + SW MI G A++G G+ A+++F + G+ P+
Sbjct: 459 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 518
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V AC+ G V E +F SM + +GI + +HY ++D+LG G LD+A+E + MP +
Sbjct: 519 VLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQ 578
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNAS 627
+ VW L+ R+H + ELG AE + L+P + N + +G+
Sbjct: 579 ANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVR 638
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+L K+ KK + + +EV+ KVH + GD SHP T +IY+ + L M +AGYIP
Sbjct: 639 KLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVD 698
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
LHD+D+ KE L HSERLAV+ LLS+P APIR+ KNLR+C DCH A K IS IV
Sbjct: 699 VDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIV 758
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
RE+IIRD RFHHF+DG CSC DYW
Sbjct: 759 SREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ VK + +AI+V G + I FS ++ AC ++ ++ + VH V R+
Sbjct: 81 MSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY 140
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V T N ++ MY + +D A +F M + D+ SW+ +I+G NG A+++ Q
Sbjct: 141 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200
Query: 502 FKQAGLKPDDQIFIGVFSACSA-----LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
K +GL P+ + + AC+ LG + G M+ + S DY V +VD
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-------IGVGLVD 253
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M +LD+A++ + M D+ +W L++ C HG
Sbjct: 254 MYAKNHFLDDAMKVFDWMS-HRDLILWNALISGCS-HG 289
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ EA + L K+ + V+ T + ++++ +A + VH E++
Sbjct: 283 ISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGF 342
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
NG++ Y +C + DA VF + D+ + +MIT ++ GE A+ +F +
Sbjct: 343 IFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFME 402
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
+ GL+PD + + +AC++L
Sbjct: 403 MLRKGLEPDPFVLSSLLNACASL 425
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY MDDA VF +ER+ SW+ +++ + KN DA+ +F +
Sbjct: 42 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 101
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G++P + F V +AC+ ++ G +M G + ++VDM G +
Sbjct: 102 WSGIQPTEFGFSCVVNACTGSRNIDAGR-QVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D A EKMP + DV W L++ C ++G+ R E++ Q+ S GLVP
Sbjct: 161 DIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQMKSS--------GLVP 208
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 70/143 (48%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G AIE+L ++ + ++ S +++AC A A + + +H + + +
Sbjct: 182 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 241
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
G++ MY++ +DDA VF M+ RDL W+ +I+G + G ++A IF
Sbjct: 242 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYG 301
Query: 502 FKQAGLKPDDQIFIGVFSACSAL 524
++ GL + V + ++L
Sbjct: 302 LRKEGLGVNRTTLAAVLKSTASL 324
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 210/340 (61%), Gaps = 13/340 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ ++C +D A +VF M ER + SW ++I A G G++AV +F + K
Sbjct: 282 VTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKT 341
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG++PDD FIGV +ACS G V EG +FESM YGI P ++HY +VDM G G ++
Sbjct: 342 AGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVE 401
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
A+EF+ KMPM+P+ +W L+ CR HG LELG+ + P+ +E + L V
Sbjct: 402 RAMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPA--HEANYVMLSNV 459
Query: 625 NA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A SE+ +E KK+ +L+E+ +VHE+ AGD SHP+ +IY ++ +
Sbjct: 460 YALTRRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEM 519
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+++ AG+I T VL D+D+E KE AL HSE+LA++ LL +P +R++KNLRVC
Sbjct: 520 ARELRRAGHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVC 579
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K IS + RE+I+RD RFH FK+G CSC D+W
Sbjct: 580 SDCHAAIKCISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 619
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 235/395 (59%), Gaps = 17/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYN 449
+EA+ V +++ I D T ++ +C + +LEE H L+S LR V+ N
Sbjct: 360 EEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH--CLALVSGLRPYVTVSN 417
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y +C S++DA +F M+ D SW ++ G+A+ G ++ +D+F + G+KP
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKP 477
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D FIGV SACS G V +G +F SM +D+ IVP HY ++D+ +G+L +A EF
Sbjct: 478 DGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEF 537
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-- 627
I++MP PD W L++ CR+ G++E+G AE + +LDP N S L ++AS
Sbjct: 538 IKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQ--NPASYVLLCSMHASKG 595
Query: 628 ---ELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
++AK +++ KK + ++ ++KVH + A D SHP + IY ++ L ++M
Sbjct: 596 EWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMV 655
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY P+ VLHD+ K L HSE+LA++ GL+ P PIRI+KNLRVC DCH+
Sbjct: 656 EEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHN 715
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A K ISKI GR++++RDA RFH F +G+CSC D+W
Sbjct: 716 ATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G EA++V + + + +D TF ++ ACG ALEE K +H ++ R
Sbjct: 248 MVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTC 307
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C S+ A +VF M +++ SW MI G+ +NG GE+AV +FS
Sbjct: 308 YEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ G+KPDD V S+C+ L + EG F ++ G+ P + ++V + G
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGA-QFHCLALVSGLRPYVTVSNALVTLYGKC 426
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +++A ++M V W L+
Sbjct: 427 GSIEDAHRLFDEMSFHDQVS-WTALV 451
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ C + +A ++F + ERD +W TM+TG +NGL +A+D+F + +
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ D F + +AC AL + EG
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEG 296
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 246/459 (53%), Gaps = 30/459 (6%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEAS------RSSQNNGTLEQLDGLVKEGKVKEAIEVL 398
G I ++ S VL N H D+F ++ + + + D + K+ V + +
Sbjct: 116 GLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIA 175
Query: 399 GLLE---------------KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G E + D ++ AC A+ +A+ VH++V L
Sbjct: 176 GYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL 235
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V ++ MY++C S+D + +F M ++++ SW MI + +G G +A+++F
Sbjct: 236 DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMML 295
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G+ P+ FI + ACS G V +G+ F MS YG+ P +KHY +VD+LG G L
Sbjct: 296 NSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D+AL IE M +E D +W + CR+H ++L ++ A+++ L +
Sbjct: 356 DQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIY 415
Query: 624 VNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
NA L ++ KK+ +EV + ++ + AGD SH +++IY +++ L
Sbjct: 416 ANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLS 475
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+++ AGY+P+T VLHD+D+E K L AHSE+LA++ GL+++P PIRI KNLRVCG
Sbjct: 476 QKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCG 535
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS K++S I R++I+RDA RFHHFK+G+CSC DYW
Sbjct: 536 DCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 15/277 (5%)
Query: 326 QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEA--------SRSSQNNG 377
+ R +Q Q + +G I + ++A+++L C D A R +
Sbjct: 12 KCRNIFQIKQVHAQVTT-TGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWS 70
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
+ + G VK G + + L + D + +++AC D L + +H V
Sbjct: 71 VM--IGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVL 128
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ L + ++ MY++C +D+A +F M ++DL + MI G+A+ G ++
Sbjct: 129 KNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWV 188
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDM 556
+F Q ++ G PD + + +AC+ LG + + ++H ++ Y + ++ +++DM
Sbjct: 189 LFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL--DVELGTAMIDM 246
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + E ++M + +V W ++ HG
Sbjct: 247 YAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHG 282
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 236/426 (55%), Gaps = 13/426 (3%)
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQ 418
N K+ + R L G + G +EA+ + +++ I D T ++
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
+C + +LEE H V+ N ++ +Y +C S++ A +F M RD S
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W +++G+A+ G + + +F G+ PD F+GV SACS G V +G +FE M
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
K++ I P HY ++D+L G L+EA FI +MP PD W L++ CR++GNLE+G
Sbjct: 500 KEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIG 559
Query: 599 DRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLASQNLLEVR 647
AE + +L+P N S L + A+ ++AK ++ KK + ++ +
Sbjct: 560 KWAAESLHKLEPQ--NPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYK 617
Query: 648 SKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSE 707
+KVH + A D S P +D+IYA + L +M E GY+P+ FVLHD+++ K + L HSE
Sbjct: 618 NKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSE 677
Query: 708 RLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLC 767
+LA++ GLL P IR++KNLRVCGDCH+A K IS+I RE+++RDA RFH FKDG+C
Sbjct: 678 KLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVC 737
Query: 768 SCRDYW 773
SC D+W
Sbjct: 738 SCGDFW 743
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G KEA++ + + +D TF ++ ACG AL+E K +H ++ R
Sbjct: 242 ITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + +L MY +C ++ A +VF M +++ SW M+ G+ +NG E+AV IF
Sbjct: 302 QDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCD 361
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ + PDD V S+C+ L + EG F + G++ + +++ + G G
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGA-QFHGQALASGLICFVTVSNALITLYGKCG 420
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
L+ A + +M + +V W L++
Sbjct: 421 SLEHAHQLFHEMKIRDEVS-WTALVS 445
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ YN ++ C + +A +F NM E+D SW T+ITG +NGL ++AVD F +
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI 263
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY 541
G D F V +AC + EG +H + DY
Sbjct: 264 EGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 26/200 (13%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++ L+ G L+ A+ V +H+ + P + ++N +L YS+ + D VF +M
Sbjct: 43 YNNLINTYGKLGDLKNARNVFDHIPQ---P-NLFSWNTLLSAYSKLGYLQDMQRVFDSMP 98
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA------LGD 526
D+ SW+++++G+A NGL ++V +++ + G ++I S+ LG
Sbjct: 99 NHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGR 158
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + F+ + Y V S +VDM TG++++A E++P E ++ V+ ++
Sbjct: 159 QIHGQI-FKFGYQSYLFVGS-----PLVDMYAKTGFINDANRIFEEIP-EKNIVVYNTMI 211
Query: 587 NLCRMHGNLELGDRCAEIVE 606
G L RC IVE
Sbjct: 212 T-----GLL----RCRFIVE 222
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+++EA+ + + + + D T L+ AC AL + +A+H +E+ L
Sbjct: 342 ITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLV 401
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + +L MY +C +++A VF M+ RD+ +W MI G A NG+G+ A++ F
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFW 461
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G +P+ +I + +ACS + EG L+FE M + I P ++HY ++D+LG +G
Sbjct: 462 MKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSG 521
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LDEA++ + MPM+P+ +W +++ CR+H + L AE + +L+P +
Sbjct: 522 LLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYN 581
Query: 622 VPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +++ + L +E+ KK A + + V +VH++ D +HP+ +I A++
Sbjct: 582 IYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEE 641
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++K GY P T + D+D+E KE ALLAHSE++A++ GL+S P+ I+KNLRV
Sbjct: 642 ITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRV 701
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K+IS+I RE+I+RD RFHHF+DG CSC D+W
Sbjct: 702 CEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 406 ISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTY-NGILKMYSECDSMDD 463
+ D TF L + C +A + + +H R + P V N I+ MY E D
Sbjct: 99 VCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGD 158
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDA---------------------------- 495
A F ++ +D +W T+I+G AK GL +DA
Sbjct: 159 ARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRA 218
Query: 496 ---VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
VD F+ G++PD+ IG+ SAC+ L D+V G + + G++ S K V+
Sbjct: 219 AEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGR-SLHKLVGEKGMLMSGKLVVA 277
Query: 553 IVDMLGSTGYLDEALEFIEKM 573
++DM G + A E + +
Sbjct: 278 LIDMYAKCGDIGRAWEVFDAL 298
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 105/238 (44%), Gaps = 36/238 (15%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE---- 437
+ G + G+ EA++ + I D T L+ AC K L +++H+ V
Sbjct: 209 ISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGM 268
Query: 438 ----RLLSPL------------------------RVSTYNGILKMYSECDSMDDAFSVFS 469
+L+ L R ++N ++ Y + +D A +F
Sbjct: 269 LMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFD 328
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +RDL +++++ITG+ G +A+ +F Q ++ L+ D+ + + +AC++LG + +
Sbjct: 329 QMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQ 388
Query: 530 G-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G LH + + + + +++DM G ++EA + M + DV W ++
Sbjct: 389 GRALH--ACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMI 443
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 234/401 (58%), Gaps = 24/401 (5%)
Query: 391 VKEAIEVLGL---LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
V ++EVL L ++K I + T L+ AC + AL + H +V L L+++
Sbjct: 196 VSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYV--LKHNLKLNH 253
Query: 448 YNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ G ++ MYS+C +D A +F + RD ++ MI GFA +G G A+D+F +
Sbjct: 254 FVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLE 313
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
GL PDD + +CS +G V EG FESM + YG+ P ++HY +VD+LG G L E
Sbjct: 314 GLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLRE 373
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A E + MPM+P+ +W L+ R+HGNLE+G+ + + QL+P E S ++ N
Sbjct: 374 AEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEP----ETSGNYVLLSN 429
Query: 626 -------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+L K+ K+ +L+EV +HE+ GD +HP + +IY +
Sbjct: 430 MYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEE 489
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++ E G+ P T VL DI++E KE+AL HSERLA++ L++S APIRI+KNLRV
Sbjct: 490 MSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRV 549
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH++ K+ISKI RE+I+RD RFHHFK+G CSC DYW
Sbjct: 550 CGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSP-LRVSTYNGILKMYSECDSMDDAFSVFSN 470
TF L +ACG L +A+H HV + L P +L Y++C + +F+
Sbjct: 110 TFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQ 169
Query: 471 MTERDLTSWDTMITGFAKN--------GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
+++ DL SW+++++ + N L + + +F + +++ +K ++ + + SAC+
Sbjct: 170 ISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACA 229
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMK--HYV--SIVDMLGSTGYLDEALEFIEKMP 574
LG + +G + + Y + ++K H+V +++DM G LD A + +++P
Sbjct: 230 ELGALSQG-----AWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLP 280
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 233/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ + KEA+E+ ++ + D T ++ AC ALE + + +++R
Sbjct: 343 MIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNK 402
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY +C +D A S+F M++RD +W MI G A NG GE A+D+FS
Sbjct: 403 IKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFS 462
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+A + PD+ +IGV SAC+ G V +G +F M+ +GI P++ HY +VD+L
Sbjct: 463 NMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARA 522
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L EA E IE MP++ + VW L+ CR++ ++ + + + +L+P N
Sbjct: 523 GRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD--NGAVYVL 580
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A+ ++ +K KK +L+E+ +VHE+ AGD SHP+T I A
Sbjct: 581 LCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAK 640
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +K AGY P+ V DI +E KE ++ HSE+LA++ GL++SP IRI KN
Sbjct: 641 LDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKN 700
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+ K++SK+ RE+I+RD RFHHFK GLCSC+DYW
Sbjct: 701 LRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K GK +E+ + ++E + + T ++ AC K L K VH +V+ +
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 276
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE------------- 493
N ++ MY++C MD A +F +M RD+ SW T+++GF LGE
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGF--TNLGEIDVARNYFDKMPE 334
Query: 494 --------------------DAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+A+++F + +KPD+ + V +AC+ LG
Sbjct: 335 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLG 386
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ D TF L + ALE + +H HV + V + +++MY C +D A
Sbjct: 135 VKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTAR 194
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF + D+ +W+ +I+ + K G E++ +F + + P + V SACS L
Sbjct: 195 GVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLK 254
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
D+ G S K+ + ++ +++DM G +D AL M D+ W +
Sbjct: 255 DLRTGK-KVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTI 312
Query: 586 MN 587
++
Sbjct: 313 VS 314
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +F + E +L W+TMI G+++ + V ++ + + G+KPD F +F +
Sbjct: 92 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 151
Query: 524 LGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ G LH + +G+ ++ + ++V M G LD A + P + DV W
Sbjct: 152 DIALEYGRQLHGHVLK--HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITW 208
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLAS 640
+++ G E R ++E D L LV S+L + KK+ S
Sbjct: 209 NMIISAYNKVGKFEESRRLFLVME--DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 232/407 (57%), Gaps = 16/407 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + G +A+E+L + E+ C + T S + AC AL K +H + R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 439 L---LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
PL VS N ++ MY++C S+ DA VF NM ++ +W +++TG+ +G GE+A
Sbjct: 506 NQQNAVPLFVS--NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ IF + ++ G K D + V ACS G + +GM +F M +G+ P +HY +VD
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
+LG G L+ AL IE+MPMEP VW ++ CR+HG +ELG+ AE + +L +
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS 683
Query: 616 KSKAGLVPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
+ + NA L + K KK + +E + GD +HP +I
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
Y ++ ++K+ GY+PET F LHD+D E K++ L HSE+LA+++G+L++P A IRI
Sbjct: 744 YQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRI 803
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A +S+I+ ++I+RD+ RFHHFK+G CSC+ YW
Sbjct: 804 TKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVS 446
G + + + GL+ + D TF + +ACG+ ++ ++ H V +S + V
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QA 505
N ++ MYS C S+ DA VF M+ D+ SW+++I +AK G + A+++FS+ +
Sbjct: 166 --NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 506 GLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G +PD+ + V C++LG G LH +++ + ++ +M +VDM G +D
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE--MIQNMFVGNCLVDMYAKCGMMD 281
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
EA M ++ DV W ++
Sbjct: 282 EANTVFSNMSVK-DVVSWNAMV 302
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 52/193 (26%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM-------------------------- 482
N ++ MY++C MD+A +VFSNM+ +D+ SW+ M
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 483 ---------ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-L 532
I+G+A+ GLG +A+ + Q +G+KP++ I V S C+++G ++ G +
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 533 HFESMSK----------DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PMEPDVDV 581
H ++ D +V + ++DM +D A + + P E DV
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVIN-----QLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 582 WEKLMNLCRMHGN 594
W ++ HG+
Sbjct: 443 WTVMIGGYSQHGD 455
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+ V + I + T ++ C AL K +H + +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 442 PLRVS-------TYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLG 492
LR + N ++ MY++C +D A ++F +++ ERD+ +W MI G++++G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 493 EDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
A+++ S+ + +P+ AC++L + G +H ++ VP
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL--- 513
Query: 550 YVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+VS ++DM G + +A + M + +V W LM MHG
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEV-TWTSLMTGYGMHG 558
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 233/403 (57%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G + A+ + + T+S + + ALE+ K VH H+ +
Sbjct: 225 ISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQ 284
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L MY++ SM DA VF + ++DL +W+TM+T FA+ GLG++AV F +
Sbjct: 285 KMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEE 344
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++G+ + F+ + +ACS G V EG +FE M K+Y + P + H+V++V +LG G
Sbjct: 345 MRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAG 403
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+ AL FI KMP+EP VW L+ CRMH N ++G A+ V +LDP + L
Sbjct: 404 LLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD--DSGPPVLL 461
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS + K KK + + +E+ + VH + A D +HP ++IY +
Sbjct: 462 YNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMW 521
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++++ GY+P+ +VL +D + +E L HSE+LA++ L+ PA A IRIMKN+
Sbjct: 522 GQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNI 581
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCHSA K ISK+ GRE+++RD RFHHF +G CSC DYW
Sbjct: 582 RICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L LL+ ++ + + AC +K LE+A+ VH H+ N ++ +Y +
Sbjct: 39 LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ +A VF M +D+ SW ++I G+A+N + E+A+ + + KP+ F +
Sbjct: 99 CGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 518 FSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMP 574
A A D G +H ++ D+ YV +++DM G +D A +K+
Sbjct: 159 LKAAGAHADSGIGRQIHALAVKCDW----HEDVYVGSALLDMYARCGMMDMATAVFDKLD 214
Query: 575 MEPDVDVWEKLMN 587
+ V W L++
Sbjct: 215 SKNGVS-WNALIS 226
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ L++A G + +H + V + +L MY+ C MD A +VF +
Sbjct: 154 TFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL 213
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ SW+ +I+GFA+ G GE A+ F++ + G + + VFS+ + LG + +G
Sbjct: 214 DSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGK 273
Query: 532 LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
M K M + +++DM +G + +A + +++ + D+ W ++
Sbjct: 274 WVHAHMIKSR---QKMTAFAGNTLLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTAF 329
Query: 590 RMHG 593
+G
Sbjct: 330 AQYG 333
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 227/403 (56%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + A+E ++ ++ D+ TF + +C D AL + + +H V +
Sbjct: 308 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 367
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS C + D+ VF D MI+ + +G G+ A+++F Q
Sbjct: 368 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 427
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G +P D F+ + ACS G EGM FE M+K YG+ PS+KHY +VD+LG +G
Sbjct: 428 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 487
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LDEA I MP+ PD +W+ L++ C+ N ++ +R A+ V +LDP + S L
Sbjct: 488 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPH--DSASYVLL 545
Query: 622 VPVNA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A SE+ K + +K + +E++ +H++ GD SHP +I +
Sbjct: 546 SNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECL 605
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ A++++ GY P+ VLHD++ E KE +L HSE+LA++ LS P PIR+MKNL
Sbjct: 606 EEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNL 665
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+K++S++ GRE+++RD RFHHFKDG CSCRDYW
Sbjct: 666 RVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ D T + LM A D L A+ + E + R V ++N + Y + + A
Sbjct: 135 ATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGARK 190
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M ER++ +W+ M+ G G E+++ F ++ G+ PD+ VF C+ L D
Sbjct: 191 LFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRD 250
Query: 527 VVEG 530
VV G
Sbjct: 251 VVTG 254
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ + C + + + VH +V R + + + MY C + + +V +
Sbjct: 238 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 297
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-M 531
+ S +T+I G +NG E A++ F + G+ D F+ S+CS L + +G
Sbjct: 298 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 357
Query: 532 LHFESMSKDY-GIVPSMKHYVSIVDMLGSTG 561
+H + M +VP M V + G G
Sbjct: 358 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLG 388
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 227/396 (57%), Gaps = 13/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EA+ + +E++ + + T++ L+ AC A +H H E+ V
Sbjct: 314 GCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVG 373
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++ ++ A VFS+M RD+ +W+ MI GF+ +GLG+ A+ +F A
Sbjct: 374 NALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEH 433
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ F GV SAC LG V EG + + K +G+ P ++HY IV +L TG L+EA
Sbjct: 434 PNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARN 493
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-----------NEKS 617
F+ P++ DV W L+N C +H N LG AE V ++DP+ + EK
Sbjct: 494 FMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKR 553
Query: 618 KAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
G+V V +L ++K+ KK + +E+ + H + + D HP+ + Y ++ L A +
Sbjct: 554 WDGVVKVR--KLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMI 611
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K GY P+ VLHD++ E KE L HSE+LA+++GLL P+ A I ++KNLR+C DCH
Sbjct: 612 KPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCH 671
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SA+++ISK+ R +++RDA RFHHF+DG CSC DYW
Sbjct: 672 SAVRLISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L LV+ G ++E +EVL + + + D TF C K L +H H + L S
Sbjct: 206 LSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLR--LGLHVHGKMLTS 263
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ Y + I+ MY +C A VF + R++ W ++ +NG E+A+++F
Sbjct: 264 DVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLF 323
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV----SIV 554
S+ +Q +K ++ + + +AC+ L G +LH S + KH+V +++
Sbjct: 324 SKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGF------KHHVMVGNALI 377
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+M +G ++ A + M M D+ W ++
Sbjct: 378 NMYAKSGDIEAAKKVFSDM-MHRDIITWNAMI 408
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ +C D +EE + H + + N ++ MYS+C + DA V++ + D+
Sbjct: 140 ISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDI 199
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFE 535
+++++++ +NG + +++ +K D F+ FS C++L D+ G+ +H +
Sbjct: 200 VAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGK 259
Query: 536 SMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++ D YVS I++M G G A + + +V +W +M C +G
Sbjct: 260 MLTSDV----ECDAYVSSAIINMYGKCGKSLMARGVFDGLQ-SRNVVLWTAVMASCFQNG 314
Query: 594 NLE 596
E
Sbjct: 315 CFE 317
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 400 LLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEH--VERLLSPLRVSTYNGILKMYS 456
LL +S P +L++ D K L+ K +H H V + + N ++ Y+
Sbjct: 18 LLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYA 77
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFI 515
+ + + A ++F M ER++ SW ++TG+ NG + + G + P++ I
Sbjct: 78 KVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILA 137
Query: 516 GVFSACSALGDVVEG------------------------MLHFESMSKD----YGIVP-- 545
S+C G V EG M S+ +D + VP
Sbjct: 138 IAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVN 197
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL-----MNLCRMHGNLELG 598
+ Y SI+ L GYL E LE + M E W+K+ +LC +L LG
Sbjct: 198 DIVAYNSILSSLVENGYLREGLEVLRSMVSES--VKWDKVTFVNAFSLCASLKDLRLG 253
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 231/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V+ G ++AI + L + I + T +++ AC AL + K VH
Sbjct: 37 MIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGKRVHAIARDHG 96
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+ I+ MYS+C +D+A F+ + D SW M+ FA++G + A+ F
Sbjct: 97 VDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALATFQ 156
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ G KP+ F+ + SACS G V EG +F+ M+ YGI P +HY +VD+LG
Sbjct: 157 RMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRA 216
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE-IVEQLDPSRLNEKSKA 619
GYLDEA +F+ +MP P V + L++ CR + +++ G+R A+ ++E + A
Sbjct: 217 GYLDEAEDFLNRMPGAPHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDESMPYVVLA 276
Query: 620 GLV--------PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ L E+ +K ++ +EV +V E+ AGD SH + + I A ++
Sbjct: 277 SIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQ 336
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L + MKEAGY+P+T VLHD+ +E KE+ LL HSE+LAV+ GLL++PA +PIR++KNLR
Sbjct: 337 ELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLR 396
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH A K+IS I R ++ RD RFHHF++G+CSC DYW
Sbjct: 397 VCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENGVCSCGDYW 438
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 219/371 (59%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ AC + AL+ K +H+ V ++ + I+ MY +C ++ A F +
Sbjct: 302 TLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRL 361
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+++ SW M+ G+ +G G++A+ +F + + G+KP+ F+ V +ACS G + EG
Sbjct: 362 KRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGW 421
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F M ++ + P ++HY +VD+LG GYL EA I++M ++PD VW L+ CR+
Sbjct: 422 HWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRI 481
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE---------LAKEKENKKLASQN 642
H N+ELG+ A + +LDPS + +A L K K +
Sbjct: 482 HKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
++E + +VH + GD HP+ +KIY + L +++E GY+P VL+D+D E K L
Sbjct: 542 IVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVL 601
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LAV+ G+++S + I+I+KNLR+CGDCH A+K+ISKIV RE++IRD+KRFHHF
Sbjct: 602 RVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHF 661
Query: 763 KDGLCSCRDYW 773
KDGLCSC DYW
Sbjct: 662 KDGLCSCGDYW 672
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++C L K +H+ + + ++ MYS+C ++DA +F +
Sbjct: 88 TFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEI 147
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
ER++ SW +MI+G+ +N +AV +F +F
Sbjct: 148 PERNVVSWTSMISGYVQNERAREAVFLFKEF 178
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+LG + C V + + ++ + K E AV N ++ Y+
Sbjct: 200 LLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVG---------------NTLMDAYA 244
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFI 515
+C + + VF M E D+ SW+++I +A+NGL +A +FS + G ++ +
Sbjct: 245 KCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLS 304
Query: 516 GVFSACSALGDVVEGMLHFESMSK----DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC+ G + G + + K D +V + SIVDM G ++ A + +
Sbjct: 305 AVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT-----SIVDMYCKCGRVEMARKAFD 359
Query: 572 KMPMEPDVDVWEKLMNLCRMHGN 594
++ +V W ++ MHG+
Sbjct: 360 RLK-RKNVKSWTVMVAGYGMHGH 381
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 466 SVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
S+F ++ + SW+++I FA++G A+ FS ++ L P+ F +CS+L
Sbjct: 40 SMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSL 99
Query: 525 GDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
D+ G +H ++ YG V S +++DM GYL++A + +++P E +V
Sbjct: 100 YDLCAGKQIHQQAFVFGYGSDIFVAS-----ALIDMYSKCGYLNDARKLFDEIP-ERNVV 153
Query: 581 VWEKLMN 587
W +++
Sbjct: 154 SWTSMIS 160
>gi|115473599|ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
gi|113611934|dbj|BAF22312.1| Os07g0636900, partial [Oryza sativa Japonica Group]
Length = 352
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 216/351 (61%), Gaps = 9/351 (2%)
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
VH VE L + ++ MY++C ++ A VF M E+D+ +W +MI G A +GL
Sbjct: 2 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGL 61
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
G +++ +FS+ G+KP+ F+GV AC+ +G V EG +F SM++ +GI P+++HY
Sbjct: 62 GHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG 121
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP- 610
+VD+LG +G+++EA + I M EPD +W L+ CR+H N+E+ + + LDP
Sbjct: 122 CMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPL 181
Query: 611 --------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPE 662
S + ++ + + + +++ ++ +E K+HE+ +GD HP
Sbjct: 182 GDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPR 241
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
+ +IY ++ + ++K+AGY P T VL DID++ KE +L HSE+LA++ LL++PAR+
Sbjct: 242 SKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARS 301
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IRI KNLR C DCHSA+K+IS + R+LI+RD RFHHF +G CSC+DYW
Sbjct: 302 TIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 352
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 234/402 (58%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +EA+++ ++K I + T ++ +C ALE K VH +++
Sbjct: 297 MISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKR 356
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V+ ++ Y++C S++ + VF M +++ SW +I G A NG G+ A++ F
Sbjct: 357 MKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFY 416
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++P+D FIGV SACS G V EG F SMS+D+GI P ++HY +VD+LG
Sbjct: 417 LMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRA 476
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G ++EA +FI+ MP++P+ +W L+ C++H N+E+G+ + + L+P+ +
Sbjct: 477 GLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLS 536
Query: 621 LVPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ + KEK KK +L+E+ +HE+ A D H ++++IY I
Sbjct: 537 NIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIE 596
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ Q+K AGY+P T D +++ KE ++ HSE+LA++ GL+ SP IRI KNLR
Sbjct: 597 DMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLR 656
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH+A K++SK+ RE+++RD RFHHFK+G CSC DYW
Sbjct: 657 VCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G K G +E +++ + + I D T ++ ACG LE + ++ +VE
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKG 258
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MY++C +D A +F M RD+ +W MI+G+++ +A+D+F + +
Sbjct: 259 NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQ 318
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+A + P++ + + S+C+ LG + G +HF K + ++ +++D G
Sbjct: 319 KANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG--TALMDFYAKCGS 376
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
++ ++E KMP++ +V W L+
Sbjct: 377 VESSIEVFGKMPVK-NVLSWTVLI 399
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI + + + + D TF +++ C +AL E + +H + + N ++
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLI 166
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C ++ A VF M+ER++ +W++M G+ K+G E+ V +F + + ++ D+
Sbjct: 167 HMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEV 226
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ V +AC L D+ G ++ G+ + S+VDM G +D A ++
Sbjct: 227 TLVSVLTACGRLADLELGEW-INRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ 285
Query: 573 MPMEPDVDVWEKLMN 587
M DV W +++
Sbjct: 286 MDRR-DVVAWSAMIS 299
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC--DSMDDAFSVFSNM 471
+ +++ C + L E +H H+ + L+ +L+ + SMD A S+F +
Sbjct: 28 TLILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
E D +++ MI GF +A+ +F + + ++PD+ F + CS L + EG
Sbjct: 85 DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H M +G +K+ +++ M + G ++ A ++M E +V W +
Sbjct: 145 QIHALIMKCGFGSHGFVKN--TLIHMYANCGEVEVARRVFDEMS-ERNVRTWNSMFAGYT 201
Query: 591 MHGNLE 596
GN E
Sbjct: 202 KSGNWE 207
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 233/404 (57%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ G ++ + + + I + P S ++ A + L K +H V L
Sbjct: 209 ISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLG 268
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C + A +F M +RD+ SW ++I G A++GL E+A+ +++
Sbjct: 269 YESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYN 328
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GLKP++ F+G+ ACS +G V +G F SM KDYGI PS++HY ++D+L +
Sbjct: 329 RMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRS 388
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G+L+EA I+ MP +PD W L++ C H N +G R A+ + L P + +
Sbjct: 389 GHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPE--DPSTYIL 446
Query: 621 LVPVNASELAKEKENKKLASQNLLEVRSK-----------VHEYRAGDTSHPETDKIYAL 669
L + AS E +K +EV+ + + AG+TSHP ++I+ L
Sbjct: 447 LSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGL 506
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L A+MK+ GYIP+T VLHD++Q+ KE L HSERLAV++GLL + I+KN
Sbjct: 507 LEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKN 566
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+ LK IS IV RE+++RDA R+HHFKDG CSC ++W
Sbjct: 567 LRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 339 QYQSYSGNIQN-----GMM--ASQVLNNCKHEDDFAEASRSSQNNG------TLEQLDGL 385
Q +S S N+ N G++ A + N H D + AS + NN TL +
Sbjct: 36 QCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAM 95
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
K+ ++ D F+ L++AC A+++ K VH ++SP+
Sbjct: 96 FKQDGLQP---------------DHYVFACLVKACAILGAMKQGKQVHA--TFIVSPVSD 138
Query: 446 S--TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MY++C D VF +++ ++ SW MI+G+A++G DA+ +F +
Sbjct: 139 DDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMP 198
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM-SKDYGIV 544
L + G+ + G+ V+ F M SK IV
Sbjct: 199 VKNLLSWTALISGLVQS----GNWVDSFYLFMEMRSKGIDIV 236
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 237/402 (58%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ ++A+E+L ++ + T S + AC ++L K VH +V R
Sbjct: 341 IGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWL 400
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++T ++ MY++C ++ + +VF + +D+ +W+TMI A +G G + + +F
Sbjct: 401 IGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFES 460
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
Q+G+KP+ F GV S CS V EG+ F SM +D+ + P HY +VD+ G
Sbjct: 461 MLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAG 520
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLN 614
L EA EFI++MPMEP W L+ CR++ N+EL A + +++P S N
Sbjct: 521 RLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFN 580
Query: 615 EKSKAGLVPVNASE---LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
A L ASE L KE+ K + L+V +VH + GD ++ E+DKIY +
Sbjct: 581 ILVTAKLWS-EASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLD 639
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +MK AGY P+T +VL DIDQE K E+L +HSE+LAV+ G+L+ ++ IR+ KNLR
Sbjct: 640 ELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLR 699
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A+K +SK+VG +I+RD+ RFHHF++G CSC+D W
Sbjct: 700 ICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 2/206 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G EAI + L + I F + +ACG + K VH+ R
Sbjct: 104 ISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGM 163
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ Y +C ++ A VF ++ +D+ SW +M + + GL + +F +
Sbjct: 164 MSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCE 223
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+KP+ + ACS L D+ G + +G++ ++ ++V +
Sbjct: 224 MGWNGVKPNSVTLSSILPACSELKDLKSGR-AIHGFAVRHGMIENVFVCSALVSLYARCL 282
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+ +A + MP DV W ++
Sbjct: 283 SVKQARLVFDLMP-HRDVVSWNGVLT 307
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ AC + K L+ +A+H R V + ++ +Y+ C S+ A VF M
Sbjct: 235 TLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLM 294
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
RD+ SW+ ++T + N + + +FSQ G++ D+ + V C
Sbjct: 295 PHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGC 344
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F N+ + D T+ T+I+ F GL +A+ +++ + G+KP + +F+ V AC A GD
Sbjct: 88 LFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGD 147
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 230/399 (57%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
++ G KEAI + + + TF ++ A A E A H + ++
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY++C +D + +F+ M +D SW+ M++G+A +G G+ A+ +FS +++
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
++ D F+ V SAC G V EG F SMS Y I P ++HY +VD+LG G DE
Sbjct: 729 QVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDE 788
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
L FI+ MP+EPD VW L+ CRMH N++LG+ + + +L+P N L +
Sbjct: 789 TLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR--NPAHFVVLSSIY 846
Query: 626 ASE-------LAKEKEN----KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
A A+ K N KK + +E+++KVH +R GD SHP+ + ++ L L
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M++ GY+P+ VL ++++E KE L +HSERLA++ LL++P + I+I+KNLRVC
Sbjct: 907 EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ K ISKI R +I+RDA RFHHF+DG+CSC DYW
Sbjct: 967 DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ LV+ G +EA+ + ++ Q + + T ++ AC D L+ K++H +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM 461
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ST ++ MY++C A + F+ M+ RD+ +W+++I G+A+ G +A+D+F +
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ + + PD +GV AC+ L D+ +G + G +++DM G
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTC-IHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
L A K D W ++
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVII 605
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 8/234 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + G AI++ L I+ D T ++ AC L++ +H + +L
Sbjct: 503 INGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGF 562
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKNGLGEDAVDIF 499
N ++ MY++C S+ A +F N T+ +D +W+ +I + +NG ++A+ F
Sbjct: 563 ESDCHVKNALIDMYAKCGSLPSAEFLF-NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF 621
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + P+ F+ V A + L EGM F + G + + S++DM
Sbjct: 622 HQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
G LD + + +M + V W +++ +HG+ GDR + + S++
Sbjct: 681 CGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH---GDRAIALFSLMQESQV 730
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 34/333 (10%)
Query: 362 HEDDFAEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
H+ D A + S N + + +++ + EA+E+ + ++ + D TF+ ++
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+AC A L+E H ++R V G++ MYS+ + A VF M +RD+
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFES 536
+W+ MI G +++ +AVD F + G++P + +F L ++ + +H
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM-----NLCRM 591
+D+ S ++D+ G +D A ++M + DV W +M N C +
Sbjct: 257 FRRDFSSAVSN----GLIDLYSKCGDVDVARRVFDQMVDQDDVS-WGTMMAGYAHNGCFV 311
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKS--KAGLVPVNASELAKEKE------NKKLASQNL 643
LEL D+ +L R+N+ S A L +L K KE +++ S L
Sbjct: 312 E-VLELFDK-----MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ V + G ET+K L GL+ +
Sbjct: 366 VATPLMVMYAKCG-----ETEKAKQLFWGLQGR 393
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 132/308 (42%), Gaps = 32/308 (10%)
Query: 328 RRQYQQNPNEGQYQSYS--GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGL 385
RR + + G YS G++ +A +V + +DD + GT+ + G
Sbjct: 258 RRDFSSAVSNGLIDLYSKCGDVD---VARRVFDQMVDQDDVSW--------GTM--MAGY 304
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPL 443
G E +E+ ++ + ++ + A + LE+ K +H +R+ S +
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+T ++ MY++C + A +F + RDL +W +I + G E+A+ +F + +
Sbjct: 365 LVAT--PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+KP+ + + AC+ L + G +H ++ D + ++V M G+
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD--SDLSTGTALVSMYAKCGF 480
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD--RCAEIVEQLDPSRLNEK--SK 618
AL +M D+ W L+N G ++GD ++ +L S +N +
Sbjct: 481 FTAALTTFNRMS-SRDIVTWNSLIN-----GYAQIGDPYNAIDMFYKLRLSAINPDAGTM 534
Query: 619 AGLVPVNA 626
G+VP A
Sbjct: 535 VGVVPACA 542
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +YS D A SVF + W++MI + ++ +A++++ + GL+PD
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F V AC+ ++ EG+ F G+ + +VDM G L A E
Sbjct: 129 KYTFTFVLKACTGALNLQEGVW-FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 571 EKMPMEPDVDVWEKLM 586
+KMP + DV W ++
Sbjct: 188 DKMP-KRDVVAWNAMI 202
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 229/394 (58%), Gaps = 18/394 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA++ L+ ++ I + T L A + LEE + +H V +L + N +
Sbjct: 695 EAVKAYKLIREKGIPANYITMVSL-AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAM 753
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C M D + R SW+ +I+ FA++G + A + F + + G KPD
Sbjct: 754 DMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 813
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + SAC+ G V EG+ +++SM++++G+ P ++H V I+D+LG +G L A FI++
Sbjct: 814 TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 873
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MP+ P+ W L+ CR+HGNLEL + AE + +LDPS A ++ N + +
Sbjct: 874 MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPS----DDSAYVLYSNVCATSGK 929
Query: 633 KEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
E+ K++ S N+ ++++ KVH + G+ HP+ +I A + L KE
Sbjct: 930 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 989
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY+P+T F LHD+D+E KE L HSERLA++ GL+++P + +RI KNLRVCGDCHS
Sbjct: 990 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1049
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +S IVGR++++RD RFHHF G CSC DYW
Sbjct: 1050 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
M A VF M R+ SW TM++G+ + GL E+AV +F Q G++P+ + + +A
Sbjct: 324 MAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 383
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS G + + GI+ + ++V GS G + A + E+MP + +V
Sbjct: 384 CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVV 442
Query: 581 VWEKLM 586
W LM
Sbjct: 443 SWTSLM 448
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILK 453
E L LL +D + +++Q C D KA ++ +H H+ S L ++T ++
Sbjct: 16 EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT--KLII 73
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
Y + + A +VF M ER + SW M++G+++NG E A +FS + G+K + +
Sbjct: 74 FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHAL 133
Query: 514 FIGVFSACSALGD 526
+ S C + D
Sbjct: 134 -VDFHSKCGKMED 145
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 439 LLSPLR---VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
L S +R V + ++ +S+C M+DA +F M ERD+ SW+ MI G+A G +D+
Sbjct: 118 LFSDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDS 177
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+F + GL PD C LG V+
Sbjct: 178 FCMFRSMLRGGLVPD----------CYTLGSVLRA 202
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L+ + +H V +L V N +L +YSE +DA VF MTERDL SW++M+
Sbjct: 593 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 652
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPD 510
+ ++G D + I ++ Q G KPD
Sbjct: 653 YVQDGKCLDGLKILAELLQMG-KPD 676
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G G E + V + ++ +S + TF+ + +CG + V H+ +
Sbjct: 450 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 509
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS N ++ M+S S+++A VF +M E D+ SW+ MI+ +A +GL +++ F +
Sbjct: 510 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 569
Query: 504 Q 504
Sbjct: 570 H 570
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 240/419 (57%), Gaps = 13/419 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S N + LV+ +EAIE+ ++ Q I D T + ACG
Sbjct: 422 DEMLERDLVSWNT----MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYL 477
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
AL+ AK V ++E+ + + ++ M+S C A VF M +RD+++W I
Sbjct: 478 GALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAI 537
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
A G E A+++F++ + +KPDD +F+ + +ACS G V +G F SM K +GI
Sbjct: 538 GVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGI 597
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
P + HY +VD+LG G L+EA++ I+ MP+EP+ VW L+ CR H N+EL AE
Sbjct: 598 RPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAE 657
Query: 604 IVEQLDPSRL-------NEKSKAG-LVPVNASEL-AKEKENKKLASQNLLEVRSKVHEYR 654
+ QL P R+ N + AG V L KEK +K+ + +EV+ +HE+
Sbjct: 658 KLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFT 717
Query: 655 AGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHG 714
+GD SH E I ++ + ++ EAGY+P+T VL D+D++ KE L HSE+LA+++G
Sbjct: 718 SGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYG 777
Query: 715 LLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
L+++ PIR++KNLR+C DCHS K++SK+ RE+ +RD R+H FK+G CSCRDYW
Sbjct: 778 LITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D TF L+ AC AL E VH V ++ + N ++ Y+EC +D
Sbjct: 126 IVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGR 185
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M ER++ SW ++I G++ L ++AV +F Q +AG++P+ + V SAC+ L
Sbjct: 186 KLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLK 245
Query: 526 DV 527
D+
Sbjct: 246 DL 247
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 427 EEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
E A V EH + V T+N ++ M+ A+ +F M ERDL SW+TMI
Sbjct: 384 EAACKVFEH----MPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGAL 439
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS 546
+ + E+A+++F + + G+ D +G+ SAC LG + + K+ I
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKN-DIHVD 498
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++ ++VDM G A+ ++M + DV W + + M GN E
Sbjct: 499 LQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTE 547
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+ + + + + + T ++ AC K LE K V ++ L L N +
Sbjct: 213 KEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNAL 272
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C + A +F ++L ++T+++ + + D + I + Q G +PD
Sbjct: 273 VDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDK 332
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEAL 567
+ +AC+ LGD+ G S Y + ++ + +I+DM G + A
Sbjct: 333 VTMLSTIAACAQLGDLSVG-----KSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAAC 387
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG-LVPVN- 625
+ E MP V W L+ G++EL R + E L+ ++ + G LV V+
Sbjct: 388 KVFEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFD--EMLERDLVSWNTMIGALVQVSM 444
Query: 626 ---ASELAKEKENK 636
A EL +E +N+
Sbjct: 445 FEEAIELFREMQNQ 458
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILK---MYSECDSMDDAFSVF 468
S+L+ C K L+E K +H + + LL S N ++ +S+D A + F
Sbjct: 29 SKLLVNC---KTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAF 85
Query: 469 S----NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
NM L ++ +I G+A GLG+ A+ ++ Q G+ PD F + SACS +
Sbjct: 86 GDDDGNMAS--LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKI 143
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ EG+ ++ K G+ + S++ G +D + + M +E +V W
Sbjct: 144 LALSEGVQVHGAVLK-MGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM-LERNVVSWTS 201
Query: 585 LMN 587
L+N
Sbjct: 202 LIN 204
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 230/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ +EA+ + + +V T + AC ALE K VH
Sbjct: 298 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 357
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V+ ++ MYS+C ++ A VF +M ER++ +W + ++G A NG+G D + +F
Sbjct: 358 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 417
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++P+ F+ V CS G V EG F+SM ++GI P ++HY +VD+ G
Sbjct: 418 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRA 477
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRL--- 613
G LD+A+ FI MP+EP VW L+N R+H N+ELG D+ I + D + +
Sbjct: 478 GRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLS 537
Query: 614 ----NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ ++ G+ N + K K KK+ + +EV KVHE+ G +HP +I +
Sbjct: 538 NIYADSQNWKGVS--NVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMM 595
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GYI T+ VL DI++E KE+A+ HSE+LA++ GL++ P IRI+KN
Sbjct: 596 LAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKN 655
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISK+ RE+++RD RFHHFKDG CSC+DYW
Sbjct: 656 LRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 699
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ G L E D+ A +F M +RD +W+ MI G+ G +A+ +F + +
Sbjct: 264 VTAMVGALATGGEADA---ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG + + +AC+ LG + G S + G+ S+ +++DM G +
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERGKW-VHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 379
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
A+E + M E +V W ++ M+G +G C + ++++ + + +V +
Sbjct: 380 AAMEVFDSMG-ERNVYTWTSAVSGLAMNG---MGRDCLALFKRMESTGVEPNGVTFVVVL 435
Query: 625 NASELA 630
+A
Sbjct: 436 RGCSMA 441
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 238/410 (58%), Gaps = 23/410 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHV--E 437
L G + G+ + AI++ G L K I + TFS ++ C A + + K H
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
RL S L VS+ +L MY++ +++ A VF E+DL SW++MI+G+A++G A+D
Sbjct: 525 RLDSSLCVSS--ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + K+ +K D FIGVF+AC+ G V EG +F+ M +D I P+ +H +VD+
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G L++A++ IE MP +W ++ CR+H ELG AE + + P E S
Sbjct: 643 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP----EDS 698
Query: 618 KAGLVPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
A ++ N +L E+ KK + +EV++K + + AGD SHP D
Sbjct: 699 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 758
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY + L ++K+ GY P+T +VL DID E KE L HSERLA++ GL+++P +P+
Sbjct: 759 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 818
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF-KDGLCSCRDYW 773
I+KNLRVCGDCH +K+I+KI RE+++RD+ RFHHF DG+CSC D+W
Sbjct: 819 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+F+ +++ C + K L + +H V + + ++ YS+C +M DA +F +
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ SW MI+GF +N E+AVD+FS+ K+ G++P++ + + +AL +
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL---TALPVISPS 413
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + +Y ++ +++D G ++EA + + + D+ W ++
Sbjct: 414 EVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ +EA+++ ++++ + + T+S ++ A E VH V +
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTN 423
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +L Y + +++A VFS + ++D+ +W M+ G+A+ G E A+ +F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KP++ F + + C+A + F + + S+ +++ M
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A E + K E D+ W +++ HG
Sbjct: 544 GNIESAEE-VFKRQREKDLVSWNSMISGYAQHG 575
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ L G ++G+ +EA + + + + +D FS +++ + +H +
Sbjct: 62 ISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
VS ++ Y + + D VF M ER++ +W T+I+G+A+N + ++ + +
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
F + + G +P+ F+ +ALG + E
Sbjct: 182 FMRMQNEGTQPNS------FTFAAALGVLAE 206
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 44/83 (53%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ N ++ +Y +C ++ A +F + + +W++MI+G+A NGL +A+ +F +
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 505 AGLKPDDQIFIGVFSACSALGDV 527
++ + F V C+ L ++
Sbjct: 289 NYVRLSESSFASVIKLCANLKEL 311
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 222/373 (59%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++AC ALE +H + + N ++ MY++C ++ DA VF +
Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDML 509
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E D SW+ MI+G++ +GL +A+ F + KPD F+G+ SACS G + G
Sbjct: 510 REHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQ 569
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SM ++Y I P +HY +V +LG +G+LD+A + + ++P EP V VW L++ C +
Sbjct: 570 AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVI 629
Query: 592 HGNLELGDRCAEIVEQLDPS-----------RLNEKSKAGLVPVNASELAKEKENKKLAS 640
H ++ELG A+ V +++P N + + + S K K +K
Sbjct: 630 HNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTS--MKRKGIRKEPG 687
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E + +VH + GDTSHP+T I ++ L + + GY+P+ VL D++ KE+
Sbjct: 688 LSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQ 747
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSERLA+++GL+ +P+ +P+RI+KNLR+C DCH+A+K+ISKIV R++IIRD RFH
Sbjct: 748 RLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFH 807
Query: 761 HFKDGLCSCRDYW 773
HF +G+CSC DYW
Sbjct: 808 HFHEGICSCGDYW 820
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EAIE+ + + + + T + L+QAC L+ +H HV ++ + V N +
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY++C M+++ +FS SW+T+I G+ + G GE A+ +F + ++ +
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV---SIVDMLGSTGYLDEAL 567
+ V AC+ + + G +H S+ Y K+ V +++DM G + +A
Sbjct: 449 VTYSSVLRACAGIAALEPGSQIHSLSVKTIYD-----KNTVVGNALIDMYAKCGNIKDA- 502
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ M E D W +++ +HG
Sbjct: 503 RLVFDMLREHDQVSWNAMISGYSVHG 528
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+ EAI + L+ + ++ FS +++ A+ + +VH V +L
Sbjct: 125 RFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGT 184
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ YS C + A VF + +D+ SW M+ + +N E+++ +FS+ + G KP
Sbjct: 185 ALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKP 244
Query: 510 DDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++ F V AC L G V G S ++ + V ++D+ +G +D
Sbjct: 245 NNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV------GVELIDLYIKSGDVD 298
Query: 565 EALEFIEKMPMEPDVDVW--------------EKLMNLCRMHGNLEL 597
+AL+ E+MP + DV W E + CRM L L
Sbjct: 299 DALQVFEEMP-KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVL 344
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 412 TFSQLMQACGDAKALEEAKAVH------EHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
TF+ +++AC + KAVH ++E L + ++ +Y + +DDA
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE------LIDLYIKSGDVDDAL 301
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M + D+ W MI +A++ E+A+++F + ++ + P+ + AC++L
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 526 DVVEG---MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
D+ G H + D + S +++DM G ++ +L+ + P DV W
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSN----ALMDMYAKCGRMENSLQLFSESPNCTDVS-W 416
Query: 583 EKLM 586
++
Sbjct: 417 NTVI 420
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ L+Q+C K +H + + + L + N +L Y + DS+ DA +F M
Sbjct: 46 IYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEM 105
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+R+ S+ T+I G+++ +A+ +FS+ + G + + +F V
Sbjct: 106 PDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 239/419 (57%), Gaps = 24/419 (5%)
Query: 372 SSQNNGTL-EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
S++N+ T + V+ G+ AI + ++ + + T L+ AC AL+ +
Sbjct: 166 SARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE 225
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+H ++ + V N ++ MY +C +++ A VF ++ +++ W+++I G NG
Sbjct: 226 WIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNG 285
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY 550
GE+A+ F ++ G+KPD F+G+ S CS G + G +F M YG+ P ++HY
Sbjct: 286 RGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHY 345
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
+VD+LG GYL EALE I MPM+P+ V L+ C++H + +LG++ + + +LDP
Sbjct: 346 GCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDP 405
Query: 611 ----------------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYR 654
SR ++ + +L ++ K + +EV + VHE+
Sbjct: 406 CDGGNYVFLSNLYASLSRWDDVN-------TCRKLMIKRGVHKTPGCSSIEVNNIVHEFV 458
Query: 655 AGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHG 714
AGDTSHP+ +I A + + ++K G++P T VLHDI++E KE A+ HSER+AV+ G
Sbjct: 459 AGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFG 518
Query: 715 LLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
L+S+P IR++KNLR C DCHSA+K+IS RE+I+RD KRFHHF++G CSC DYW
Sbjct: 519 LMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 47/93 (50%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+FS ++++C + + +A H + ++ + G+L Y++ + A VF M
Sbjct: 12 SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGM 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
RD+ + + MI+ +K+G E+A ++F +
Sbjct: 72 PRRDVVANNAMISALSKHGYVEEARNLFDNMTE 104
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 223/371 (60%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ +CG ALE K VH +VE + V ++ MY +C S++DA VF M
Sbjct: 258 TVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVM 317
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ +W++MI G+ +G ++A+ +F + G+KP D F+ V +AC+ G V +G
Sbjct: 318 EGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGW 377
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F+SM YG+ P ++HY +V++LG G + EA + + M +EPD +W L+ CR+
Sbjct: 378 EVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRI 437
Query: 592 HGNLELGDRCAEIV---------EQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H N+ LG+ AEI+ + S + ++ + + K +K +
Sbjct: 438 HSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCS 497
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV+++VHE+ AGD HP + IY+++ + +KE Y P+T VLHDI ++ KE++L
Sbjct: 498 SIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSL 557
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+ A I+I+KNLRVC DCH+ +KI+SKI GR++I+RD RFHHF
Sbjct: 558 EVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHF 617
Query: 763 KDGLCSCRDYW 773
++G CSCRDYW
Sbjct: 618 ENGSCSCRDYW 628
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 44/220 (20%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVST---------------------- 447
T S L++AC L A+AVH H + L S L VST
Sbjct: 123 TLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAM 178
Query: 448 -------YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
Y +L Y++ + +A +F M +D+ W+ MI G+A++G +A+ F
Sbjct: 179 PERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFR 238
Query: 501 QFKQAG-------LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
+ ++P++ + V S+C +G + G S ++ GI +++ ++
Sbjct: 239 KMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKW-VHSYVENNGIKVNVRVGTAL 297
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
VDM G L++A + + M + DV W ++ +HG
Sbjct: 298 VDMYCKCGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIHG 336
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 237/401 (59%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G K G K+AI++ + + + D + + + AC +LE+A+ + E+V R
Sbjct: 295 ISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDY 354
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ M+++C S++ A SVF +RD+ W MI G+ +G +A+ ++
Sbjct: 355 RDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRA 414
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ G+ P+D F+G+ AC+ G V EG F M+ D+ I P +HY I+D+LG G
Sbjct: 415 MERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAG 473
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------RLNE 615
+LD+A E I+ MP++P V VW L++ C+ H ++ELG A+ + +DPS +L+
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSN 533
Query: 616 KSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A + +E+ KEK K + +EVR ++ +R GD SHP ++I +
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEW 593
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +++KE G++ LHD++ E EE L +HSER+ +++GL+S+P +RI KNLR
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRA 653
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C +CH+A K+ISK+VGRE+++RD RFHHFKDG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D TF L++ACG L+ + VH V RL V NG++ +Y++C + A
Sbjct: 115 VSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR 174
Query: 466 SVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
+VF + ER + SW +++ +A+NG +A++IFSQ ++ +KPD + V +A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC 234
Query: 524 LGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
L D+ +G +H M P + +S+ M G + A +KM P++ +W
Sbjct: 235 LQDLEQGRSIHASVMKMGLETEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILW 291
Query: 583 EKLMN 587
+++
Sbjct: 292 NAMIS 296
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 10/209 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+E+ + K + D ++ A + LE+ +++H V ++
Sbjct: 201 GEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLL 260
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ MY++C + A +F M +L W+ MI+G+AKNG +DA+D+F + ++
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVR 320
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMS----KDYGIVPSMKHYVSIVDMLGSTGYLD 564
PD SAC+ +G + + E +S +D + S +++DM G ++
Sbjct: 321 PDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS-----ALIDMFAKCGSVE 375
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A ++ ++ DV VW ++ +HG
Sbjct: 376 CARSVFDR-TLDRDVVVWSAMIVGYGLHG 403
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 234/403 (58%), Gaps = 13/403 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +EG + E++E+ L + I VD S +M D +++ K +H ++ S +
Sbjct: 251 GYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGV 310
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+S N IL MY +C +++A +FS M R++ SW MITG+ K+GLG++A+ +F + +
Sbjct: 311 DISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQ 370
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+PDD ++ V CS G V +G +F + +GI ++HY +VD+LG G L
Sbjct: 371 LDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRL 430
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA ++ MP+E +V +W+ L++ CR+HG+LELG I+ +LD +
Sbjct: 431 KEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIY 490
Query: 624 VNAS---------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+A EL K K+ KK A ++ +E+ +VH + GD +HP T+KI+ +++ +
Sbjct: 491 ADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEME 550
Query: 675 AQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS---PARAPIRIMKNL 730
+MK E GY+ ++ LHD+++E K + L HSE+LA+ L+ R IR+ KNL
Sbjct: 551 RRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNL 610
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH +K +SKI+ ++RDA RFH F+DGLCSCRDYW
Sbjct: 611 RVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 395 IEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+E L L K +S P TFS ++ACG L+ + +H+ + + N I
Sbjct: 55 LESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSI 114
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MYS+C +++A +F M R+L SW+ MI G+ G E A+ +F + ++ G D+
Sbjct: 115 IDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDE 174
Query: 512 QIFIGVFSACSALGDVVEG 530
F ACS LG + EG
Sbjct: 175 FTFTSTLKACSDLGAIKEG 193
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 5/170 (2%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAF 465
+D TF+ ++AC D A++E +H + L + + ++ +Y +C + A
Sbjct: 172 LDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMAR 231
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VFS++ E+ + SW +I G+A+ G +++++F Q +++ ++ D I + +
Sbjct: 232 RVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFA 291
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
V +G +H ++ G+ S+ + SI+DM G ++EA +MP
Sbjct: 292 LVQQGKQMHAFAIKVPSGVDISVCN--SILDMYLKCGMINEAERLFSEMP 339
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY +C + A VF M +R++ SW ++ G +NG +++ +FS+ +G+K
Sbjct: 11 NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
P+D F AC L + G +H + + +V + + SI+DM G ++EA
Sbjct: 71 PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--SIIDMYSKCGRINEAA 128
Query: 568 EFIEKMPM 575
E MP+
Sbjct: 129 CMFEVMPV 136
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 231/385 (60%), Gaps = 13/385 (3%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSE 457
LLE++ S D T + ++ AC A ++ + +H ++ R S V+ N ++ MY++
Sbjct: 338 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAK 395
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C ++ A +F ++ +DL SW MI G+ +G G++A+ +F+Q +QAG++ D+ F+ +
Sbjct: 396 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
ACS G V EG F M + I P+++HY IVDML TG L +A FIE MP+ P
Sbjct: 456 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 515
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKK 637
D +W L+ CR+H +++L ++ AE V +L+P + A + + K +K
Sbjct: 516 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 575
Query: 638 LASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF 688
Q + +E++ +V+ + AGD+S+PET+ I A +R +RA+M E GY P T++
Sbjct: 576 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKY 635
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
L D ++ KEEAL HSE+LA++ G++SS IR+ KNLRVCGDCH K +SK+
Sbjct: 636 ALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 695
Query: 749 RELIIRDAKRFHHFKDGLCSCRDYW 773
RE+++RD+ RFH FKDG CSCR +W
Sbjct: 696 REIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +EG EA+++ +E++ IS D+ T + ++ C + L+E K VHE ++
Sbjct: 217 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 276
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C SM +A VFS M +D+ SW+T+I G++KN +A+ +F+
Sbjct: 277 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 336
Query: 501 -QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV-SIVDML 557
++ PD++ V AC++L +G +H M Y S +H S+VDM
Sbjct: 337 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMY 393
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L A + + D+ W ++ MHG
Sbjct: 394 AKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 428
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G V G ++ + V + I +DL T + C D++ + +AVH +
Sbjct: 117 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MYS+C +D A +VF M++R + S+ +MI G+A+ GL +AV +F +
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ PD V + C+ + EG +H D G + + +++DM
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKC 294
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + EA +M ++ D+ W ++
Sbjct: 295 GSMQEAELVFSEMRVK-DIISWNTII 319
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 43/266 (16%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++ L K G +I + + + +D TFS + ++ +++ + +H + +
Sbjct: 16 MNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 75
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
R S N ++ Y + +D A VF MTERD+ SW+++I G+ NGL E + +F Q
Sbjct: 76 GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 135
Query: 502 FKQAGLKPDDQIFIGVFSAC-----------------------------------SALGD 526
+G++ D + VF+ C S GD
Sbjct: 136 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 195
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME---PDVDVWE 583
+ F MS D +V Y S++ G EA++ E+M E PDV
Sbjct: 196 LDSAKAVFREMS-DRSVVS----YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 250
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLD 609
++N C + L+ G R E +++ D
Sbjct: 251 AVLNCCARYRLLDEGKRVHEWIKEND 276
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 274/522 (52%), Gaps = 46/522 (8%)
Query: 271 QRFSESLGSFNGNCMQDTGQHQQ--ALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSR 328
++F+E+L F MQD G H + S GI Q+
Sbjct: 553 EKFAEALNLFKE--MQDQGIHSDNIGFASAISACAGI--------------------QAL 590
Query: 329 RQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDD--FAEASRSSQNNGTLEQL-DGL 385
Q QQ + YS ++ G + C D FA S++N + L G
Sbjct: 591 NQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGF 650
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G +EA+ + + K ++ TF + A + ++ K +H + +
Sbjct: 651 AQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSET 710
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ +Y++C ++DDA F M E++ SW+ M+TG++++G G A+ +F KQ
Sbjct: 711 EVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQL 770
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+ P+ F+GV SACS +G V EG+ +F+SM + +G+VP +HY +VD+LG +G L
Sbjct: 771 GVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSR 830
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A F+E+MP++PD V L++ C +H N+++G+ A + +L+P K A V ++
Sbjct: 831 ARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEP-----KDSATYVLLS 885
Query: 626 --------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
++ K++ KK ++ +EV + VH + AGD HP DKIY +R
Sbjct: 886 NMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLR 945
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L E GYIP+T +L+D ++ K + HSE+LA++ GLLS + PI + KNLR
Sbjct: 946 DLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLR 1005
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ +K +SKI R +++RD+ RFHHFK G+CSC+DYW
Sbjct: 1006 VCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 18/241 (7%)
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISV 408
N + A QV N D+ + S S GL ++G +A+E+ + C+
Sbjct: 321 NFIPAEQVFNAMLQRDEVSYNSLIS----------GLSQQGYSDKALELFKKMCLDCLKP 370
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + L+ AC AL K H + + + +L +Y +C + A F
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF 430
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ ++ W+ M+ + ++ IF+Q + G++P+ + + CS+L V
Sbjct: 431 LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVD 490
Query: 529 EG-MLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
G +H + + + YVS ++DM G LD AL+ ++ E DV W +
Sbjct: 491 LGEQIHTQVLKTGF----QFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAM 545
Query: 586 M 586
+
Sbjct: 546 I 546
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ L GL + G +EA+ + + + FS ++ AC + + + +H V +
Sbjct: 240 VAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLK 299
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L N ++ +YS + A VF+ M +RD S++++I+G ++ G + A+++
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALEL 359
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + LKPD + SACS++G ++ G F S + G+ + +++D+
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVGK-QFHSYAIKAGMSSDIILEGALLDLYV 418
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ A EF E +V +W ++
Sbjct: 419 KCSDIKTAHEFFLSTETE-NVVLWNVML 445
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 392 KEAIEVLGLLEKQC---ISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVST 447
K A VLGL + + D T++ +++ CG + +H +
Sbjct: 148 KMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFV 207
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ +Y + ++ A VF + +RD SW M++G +++G E+AV +F Q +G+
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267
Query: 508 KPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGI--------------VPSMK 548
P IF V SAC+ +G+ + G++ + S + + +P+ +
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327
Query: 549 -----------HYVSIVDMLGSTGYLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGN 594
Y S++ L GY D+ALE +KM ++ PD L++ C G
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387
Query: 595 LELGDR 600
L +G +
Sbjct: 388 LLVGKQ 393
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + K EA+ + ++ Q I D F+ + AC +AL + + +H
Sbjct: 545 MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ +Y+ C + DA+ F + +D SW+++I+GFA++G E+A+ +FS
Sbjct: 605 YSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFS 664
Query: 501 QFKQAG 506
Q +AG
Sbjct: 665 QMSKAG 670
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 73/140 (52%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+ E+ ++ ++ + I + T+ +++ C +A++ + +H V + V +
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSV 513
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++ +D A +F + E+D+ SW MI G+A++ +A+++F + + G+ D
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSD 573
Query: 511 DQIFIGVFSACSALGDVVEG 530
+ F SAC+ + + +G
Sbjct: 574 NIGFASAISACAGIQALNQG 593
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
I L L+E++ + + T+ L+ C + + +H + ++ V ++ +
Sbjct: 53 INFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDL 112
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y +D A +VF M R L+ W+ ++ F + + +F + Q +KPD++ +
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 515 IGVFSACSALGDV 527
GV C GDV
Sbjct: 173 AGVLRGCGG-GDV 184
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 230/391 (58%), Gaps = 14/391 (3%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LGL + ++ P T ++ AC ALE K VH +V R L ++
Sbjct: 305 EALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALV 364
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
Y++C +DDA F +M ++ +W +I G A NG G +A+++FS ++AG++P D
Sbjct: 365 DFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDV 424
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
FIGV ACS V EG HF+SM++DYGI P ++HY +VD+LG G +DEA +FI
Sbjct: 425 TFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRT 484
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVPVN 625
MP+EP+ +W L++ C +H N+ +G+ + + L+PS N + AG +
Sbjct: 485 MPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWK-D 543
Query: 626 ASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A+ + KE +++ K +L+E+ V E+ A D+ HPE +IY + + ++K AGY
Sbjct: 544 AAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGY 603
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P T V ++++ KE ++ HSE+LA++ GL+ A IR+ KNLRVC DCHSA K+
Sbjct: 604 VPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKL 663
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+ RE+++RD FHHFKDG CSC DYW
Sbjct: 664 ISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 386 VKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
+K G E +E+ G+LE ++ D T ++ ACG + K V HV+
Sbjct: 197 LKNGDWMEVVEMFKGMLEVG-VAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARN 255
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
++ MY++C + A +F M RD+ +W MI+G+ + +A+ +FS+ +
Sbjct: 256 PKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQL 315
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
A ++P+D + V SAC+ LG + G +H K + + ++VD G +
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG--TALVDFYAKCGCI 373
Query: 564 DEALEFIEKMPME 576
D+A+E E MP++
Sbjct: 374 DDAVEAFESMPVK 386
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T + +++C AL+ + V + V+R L R + ++ MY+ C + A VF
Sbjct: 122 TAACALKSCSRMCALDVGRGVQAYAVKRGLVADRF-VLSSLIHMYASCGDVAAARLVFDA 180
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV--- 527
E + W+ ++ + KNG + V++F + G+ D+ + V +AC +GD
Sbjct: 181 AEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLG 240
Query: 528 --VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V G + E ++++ +V +++DM G + +A + M DV W +
Sbjct: 241 KWVAGHVDEEGLARNPKLV------TALMDMYAKCGEIGKARRLFDGM-QSRDVVAWSAM 293
Query: 586 MN 587
++
Sbjct: 294 IS 295
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 226/372 (60%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +C AL+ + +HE+V++ V ++ MY++C S+DDA SVF +M
Sbjct: 238 TMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDM 297
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W MI +A +G G A+ + + K+A ++PD+ F+G+ ACS G V EG
Sbjct: 298 PRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGY 357
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM+ +YGIVPS+KHY ++D+LG G L+EA +FI+++P++P +W L++ C
Sbjct: 358 EYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSS 417
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKS-KAGLVPVNA--------SELAKEKENKKLASQN 642
HGN+E+ + + +LD S + + L N ++ +K K+ +
Sbjct: 418 HGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCS 477
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH-DIDQEGKEEA 701
+EV + VHE+ +GD H + ++ + L ++K AGY+P+T V + DI+ E KE
Sbjct: 478 SIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIV 537
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+++GLL++P IR++KNLRVC DCH+A K IS I GR++I+RD +RFHH
Sbjct: 538 LRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHH 597
Query: 762 FKDGLCSCRDYW 773
FKDG CSC DYW
Sbjct: 598 FKDGKCSCGDYW 609
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 13/267 (4%)
Query: 339 QYQSYSGNIQ--NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKE------GK 390
Q Q+Y+ N + ++++N C A + + + Q D ++ +
Sbjct: 53 QIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYAR 112
Query: 391 VKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
+ + + L + S LP TFS L++AC KALEE K +H +L +
Sbjct: 113 FDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYV 172
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ MY+ C+ +D A VF + E + +++ +IT A+N +A+ +F + +++GL
Sbjct: 173 CPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGL 232
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP D + S+C+ LG + G E + K+ G +K +++DM G LD+A+
Sbjct: 233 KPTDVTMLVALSSCALLGALDLGRWIHEYVKKN-GFDQYVKVNTALIDMYAKCGSLDDAV 291
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ MP D W ++ HG+
Sbjct: 292 SVFKDMPRR-DTQAWSAMIVAYATHGH 317
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 237/403 (58%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERL 439
L G + G+ +EA ++ L ++ I + TF ++ AC A +E+ K H + +L
Sbjct: 474 MLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKL 533
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + ++ +Y++ +++ A +F ERDL SW++MI+G+A++G + A+++F
Sbjct: 534 RLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVF 593
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++ L+ D FIGV SAC+ G V +G +F M D+ I P+M+HY ++D+
Sbjct: 594 EEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSR 653
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP--------- 610
G L +A++ I MP P VW ++ R+H N+ELG AE + L+P
Sbjct: 654 AGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLL 713
Query: 611 SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S + + VN +L ++ KK + +EV++K + + AGD SHP +D IY+ +
Sbjct: 714 SNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKL 773
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++++ GY P+T +V HDI+ E KE L HSERLA++ GL+++ P++I+KNL
Sbjct: 774 SELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNL 833
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCHS +K++S + R +++RD+ RFHHFK GLCSC DYW
Sbjct: 834 RVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 346 NIQNGMMASQVLNNCKHEDD----FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLL 401
N+ +M + L CK DD F+ + G ++ G +A+ + L+
Sbjct: 340 NVLTALMVA--LTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLM 397
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
++ + + T+S ++ A + E +H V + S +L + + ++
Sbjct: 398 RREGVKPNHFTYSTILTV-QHAVFISE---IHAEVIKTNYEKSSSVGTALLDAFVKIGNI 453
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
DA VF + +D+ +W M+ G+A+ G E+A IF Q + G+KP++ F + +AC
Sbjct: 454 SDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINAC 513
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+A VE F + + + ++ S+V + G ++ A E ++ E D+
Sbjct: 514 TAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVS 572
Query: 582 WEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
W +++ HG + E+ E++ L
Sbjct: 573 WNSMISGYAQHGQ---AKKALEVFEEMQKRNL 601
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ EA E ++ TF+ ++++C K L + + H + L
Sbjct: 275 MIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVL--HCKTLK 332
Query: 441 SPLRV--STYNGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVD 497
S L + ++ ++C +DDAFS+FS M + + SW MI+G+ +NG + AV+
Sbjct: 333 SGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVN 392
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+FS ++ G+KP+ + + + A V +H E + +Y S+ +++D
Sbjct: 393 LFSLMRREGVKPNHFTYSTILTVQHA---VFISEIHAEVIKTNYEKSSSVG--TALLDAF 447
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G + +A++ E + + DV W ++
Sbjct: 448 VKIGNISDAVKVFELIETK-DVIAWSAML 475
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 8/205 (3%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMY 455
E+ L++ + D T S ++ A + A+ +H V +L N ++ M
Sbjct: 189 ELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISML 248
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
S+ + DA VF NM +D SW++MI G NG +A + F+ + AG KP F
Sbjct: 249 SKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFA 308
Query: 516 GVFSACSALGDV-VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
V +C++L ++ + +LH +++ G+ + +++ L +D+A M
Sbjct: 309 SVIKSCASLKELGLVRVLHCKTLKS--GLSTNQNVLTALMVALTKCKEIDDAFSLFSLMH 366
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGD 599
V W +++ G L+ GD
Sbjct: 367 GVQSVVSWTAMIS-----GYLQNGD 386
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 2/197 (1%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+ +EA+ + L + +S D T S ++ C + + VH + +S N
Sbjct: 82 QTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGN 141
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++ ++ D VF M +RD+ SW++++TG++ N + ++F + G +P
Sbjct: 142 SLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRP 201
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D V +A + G V GM ++ G S++ ML +G L +A
Sbjct: 202 DYYTVSTVIAALANQGAVAIGM-QIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 570 IEKMPMEPDVDVWEKLM 586
+ M + V W ++
Sbjct: 261 FDNMENKDSVS-WNSMI 276
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 230/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ +EA+ + + +V T + AC ALE K VH
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V+ ++ MYS+C ++ A VF +M ER++ +W + ++G A NG+G D + +F
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++P+ F+ V CS G V EG F+SM ++GI P ++HY +VD+ G
Sbjct: 425 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRA 484
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRL--- 613
G LD+A+ FI MP+EP VW L+N R+H N+ELG D+ I + D + +
Sbjct: 485 GRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLS 544
Query: 614 ----NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ ++ G+ N + K K KK+ + +EV KVHE+ G +HP +I +
Sbjct: 545 NIYADSQNWKGVS--NVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMM 602
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GYI T+ VL DI++E KE+A+ HSE+LA++ GL++ P IRI+KN
Sbjct: 603 LAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKN 662
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISK+ RE+++RD RFHHFKDG CSC+DYW
Sbjct: 663 LRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ G L E D+ A +F M +RD +W+ MI G+ G +A+ +F + +
Sbjct: 271 VTAMVGALATGGEADA---ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG + + +AC+ LG + G S + G+ S+ +++DM G +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKW-VHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
A+E + M E +V W ++ M+G +G C + ++++ +
Sbjct: 387 AAMEVFDSMG-ERNVYTWTSAVSGLAMNG---MGRDCLALFKRMEST 429
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 230/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ +EA+ + + +V T + AC ALE K VH
Sbjct: 305 MIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRG 364
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V+ ++ MYS+C ++ A VF +M ER++ +W + ++G A NG+G D + +F
Sbjct: 365 MRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFK 424
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++P+ F+ V CS G V EG F+SM ++GI P ++HY +VD+ G
Sbjct: 425 RMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRA 484
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRL--- 613
G LD+A+ FI MP+EP VW L+N R+H N+ELG D+ I + D + +
Sbjct: 485 GRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLS 544
Query: 614 ----NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ ++ G+ N + K K KK+ + +EV KVHE+ G +HP +I +
Sbjct: 545 NIYADSQNWKGVS--NVRNMMKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMM 602
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GYI T+ VL DI++E KE+A+ HSE+LA++ GL++ P IRI+KN
Sbjct: 603 LAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKN 662
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISK+ RE+++RD RFHHFKDG CSC+DYW
Sbjct: 663 LRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACSCKDYW 706
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ G L E D+ A +F M +RD +W+ MI G+ G +A+ +F + +
Sbjct: 271 VTAMVGALATGGEADA---ARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG + + +AC+ LG + G S + G+ S+ +++DM G +
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKW-VHSCAHSRGMRLSVTLGTALIDMYSKCGAVA 386
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
A+E + M E +V W ++ M+G +G C + ++++ +
Sbjct: 387 AAMEVFDSMG-ERNVYTWTSAVSGLAMNG---MGRDCLALFKRMEST 429
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 230/395 (58%), Gaps = 17/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLSPLRVSTYN 449
+EA+ ++ I D T ++ +C + +LEE H V L+ + VS N
Sbjct: 361 EEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVS--N 418
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ +Y +C S++DA +F M+ D SW ++TG+A+ G ++ +D+F + GLKP
Sbjct: 419 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKP 478
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D FIGV SACS G V +G +F+SM KD+ IVP HY ++D+ +G EA EF
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA--- 626
I++MP PD W L++ CR+ GN+E+G AE + + DP N S L ++A
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ--NPASYVLLCSMHAAKG 596
Query: 627 --SELA------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+E+A ++++ KK + ++ ++KVH + A D SHP + +IY + L ++M
Sbjct: 597 QWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMA 656
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
E GY P+ VLHD+ K + HSE+LA++ GL+ P PIRI+KNLRVC DCH+
Sbjct: 657 EEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHN 716
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A K ISKI GR++++RDA RFH F DG CSC D+W
Sbjct: 717 ATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Query: 327 SRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV 386
+RR +Q+ E + + G++ +++ + K R S T+ + GL
Sbjct: 200 ARRVFQEM--EAKTVVMYNTLITGLLRCKMIEDAKGLFQLM-VDRDSITWTTM--VTGLT 254
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G EA++V + + + +D TF ++ ACG A EE K +H ++ R V
Sbjct: 255 QNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVF 314
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ ++ MYS+C S+ A +VF MT R++ SW MI G+ +N E+AV FS+ + G
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG 374
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+KPDD V S+C+ L + EG F ++ G++ + ++V + G G +++A
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGA-QFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
++M V W L+
Sbjct: 434 HRLFDEMSFHDQVS-WTALVT 453
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 411 PTF--SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
PTF + L+ A + L A+ V + + P + T N +L + + D +F
Sbjct: 47 PTFLLNHLLTAYAKSGRLARARRVFDEMP---DP-NLFTRNALLSALAHSRLVPDMERLF 102
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDV 527
++M ERD S++ +ITGF+ G +V ++ + ++ ++P + SAL D
Sbjct: 103 ASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDR 162
Query: 528 VEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
G +H + + +G + +VDM G + +A ++M
Sbjct: 163 ALGHSVHCQVLRLGFGAYAFVGS--PLVDMYAKMGLIRDARRVFQEM 207
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 227/403 (56%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + A+E ++ ++ D+ TF + +C D AL + + +H V +
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS C + D+ VF D MI+ + +G G+ A+++F Q
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G +P D F+ + ACS G EGM FE M+K YG+ PS+KHY +VD+LG +G
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 425
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LDEA I MP+ PD +W+ L++ C+ N ++ +R A+ V +LDP + S L
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPH--DSASYVLL 483
Query: 622 VPVNA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A SE+ K + +K + +E++ +H++ GD SHP +I +
Sbjct: 484 SNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECL 543
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ A++++ GY P+ VLHD++ E KE +L HSE+LA++ LS P PIR+MKNL
Sbjct: 544 EEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNL 603
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+K++S++ GRE+++RD RFHHFKDG CSCRDYW
Sbjct: 604 RVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ D T + LM A D L A+ + E + R V ++N + Y + + A
Sbjct: 73 ATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGARK 128
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M ER++ +W+ M+ G G E+++ F ++ G+ PD+ VF C+ L D
Sbjct: 129 LFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRD 188
Query: 527 VVEG 530
VV G
Sbjct: 189 VVTG 192
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ + C + + + VH +V R + + + MY C + + +V +
Sbjct: 176 LGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-M 531
+ S +T+I G +NG E A++ F + G+ D F+ S+CS L + +G
Sbjct: 236 SLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQ 295
Query: 532 LHFESMSKDY-GIVPSMKHYVSIVDMLGSTG 561
+H + M +VP M V + G G
Sbjct: 296 IHGQVMKAGVDKVVPVMTCLVHMYSRCGCLG 326
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 231/385 (60%), Gaps = 13/385 (3%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSE 457
LLE++ S D T + ++ AC A ++ + +H ++ R S V+ N ++ MY++
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAK 546
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C ++ A +F ++ +DL SW MI G+ +G G++A+ +F+Q +QAG++ D+ F+ +
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
ACS G V EG F M + I P+++HY IVDML TG L +A FIE MP+ P
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKK 637
D +W L+ CR+H +++L ++ AE V +L+P + A + + K +K
Sbjct: 667 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726
Query: 638 LASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF 688
Q + +E++ +V+ + AGD+S+PET+ I A +R +RA+M E GY P T++
Sbjct: 727 RIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKY 786
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
L D ++ KEEAL HSE+LA++ G++SS IR+ KNLRVCGDCH K +SK+
Sbjct: 787 ALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTR 846
Query: 749 RELIIRDAKRFHHFKDGLCSCRDYW 773
RE+++RD+ RFH FKDG CSCR +W
Sbjct: 847 REIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +EG EA+++ +E++ IS D+ T + ++ C + L+E K VHE ++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C SM +A VFS M +D+ SW+T+I G++KN +A+ +F+
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 501 -QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV-SIVDML 557
++ PD++ V AC++L +G +H M Y S +H S+VDM
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMY 544
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L A + + D+ W ++ MHG
Sbjct: 545 AKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G V G ++ + V + I +DL T + C D++ + +AVH +
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L MYS+C +D A +VF M++R + S+ +MI G+A+ GL +AV +F +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G+ PD V + C+ + EG +H D G + + +++DM
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKC 445
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + EA +M ++ D+ W ++
Sbjct: 446 GSMQEAELVFSEMRVK-DIISWNTII 470
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 43/266 (16%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++ L K G +I + + + +D TFS + ++ +++ + +H + +
Sbjct: 167 MNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGF 226
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
R S N ++ Y + +D A VF MTERD+ SW+++I G+ NGL E + +F Q
Sbjct: 227 GERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 502 FKQAGLKPDDQIFIGVFSAC-----------------------------------SALGD 526
+G++ D + VF+ C S GD
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME---PDVDVWE 583
+ F MS D +V Y S++ G EA++ E+M E PDV
Sbjct: 347 LDSAKAVFREMS-DRSVVS----YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLD 609
++N C + L+ G R E +++ D
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKEND 427
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCIS----VDLPTFSQLMQA 419
D RS + T QL + G ++ A+++L C+S +D T ++Q
Sbjct: 52 DSITTFDRSVTDANT--QLRRFCESGNLENAVKLL------CVSGKWDIDPRTLCSVLQL 103
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
C D+K+L++ K V + + + + + MY+ C + +A VF + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMS 538
+ ++ AK+G ++ +F + +G++ D F V + S+L V G LH +
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G S+ + S+V +D A + ++M E DV W ++N
Sbjct: 224 SGFGERNSVGN--SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIIN 269
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 231/401 (57%), Gaps = 13/401 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ G+ EA+ + + + FS ++ AC L K +H +V R
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGR 340
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ + ++ MYS+C ++ A +F M D SW +I G A +G G +AV +F + K
Sbjct: 341 NIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMK 400
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ G+KP+ F+ V +ACS +G V E +F SM+K YG+ ++HY ++ D+LG G L
Sbjct: 401 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 460
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+EA +FI KM +EP VW L++ C +H NLEL ++ AE + +D N + +
Sbjct: 461 EEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSE--NMGAYVLMCN 518
Query: 624 VNAS-----ELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AS E+AK +K +K + + +E+++K H + +GD SHP D+I ++
Sbjct: 519 MYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKA 578
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ QM++ GY+ +T VLHD+D+E K E L HSERLAV+ G++++ IR+ KN+R+
Sbjct: 579 VMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRI 638
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K ISKI RE+I+RD RFHHF G CSC DYW
Sbjct: 639 CTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F ++++C L ++VH + RL + T N ++ MYS+ +D VF M
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELM 166
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+D+ S++T+I G+A++G+ EDA+ + + + LKPD V S DV++G
Sbjct: 167 PRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGK 226
Query: 532 -LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+H + K GI + S+VDM + ++++
Sbjct: 227 EIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDS 260
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G ++A+ ++ + + D T S ++ + + + K +H +V R
Sbjct: 178 IAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGI 237
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY++ ++D+ VFS++ RD SW++++ G+ +NG +A+ +F Q
Sbjct: 238 DSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQ 297
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVDML 557
A ++P F V AC+ L + G LH + +G + S ++VDM
Sbjct: 298 MVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIAS-----ALVDMY 352
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G + A + ++M + +V W ++ +HG+
Sbjct: 353 SKCGNIQAARKIFDRMNLHDEVS-WTAIIMGHALHGH 388
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
K+ +AK +H R S L ++ + ++ +Y+ + +A VF + + +W ++I
Sbjct: 19 KSKSQAKQLHAQFIRTQS-LSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVI 77
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F L A+ F + + +G PD +F V +C+ + D+
Sbjct: 78 RCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 239/398 (60%), Gaps = 24/398 (6%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDA-KALEEAKAVHEHVERLLSPLRVSTYNGI 451
E I+V GLL + T + +M AC + A+ + K +H + R + ++ + +
Sbjct: 306 EMIKVAGLLP------NTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSAL 359
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAG---- 506
+ MY++C ++ + VF+ M +++ +W+ +I +G GE+A+++F + +AG
Sbjct: 360 VDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGE 419
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
KP++ FI VF+ACS G + EG+ F M D+G+ P+ HY +VD+LG G L+EA
Sbjct: 420 AKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEA 479
Query: 567 LEFIEKMPMEPD-VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSK 618
E + MP E D V W L+ CR+H N+ELG+ A+ + L+P+ N S
Sbjct: 480 YELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS 539
Query: 619 AGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
AGL A E+ K KK + +E R +VH++ AGD SHP++++++ + L
Sbjct: 540 AGLWN-KAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSE 598
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+M++ GY+P+T VLH++D++ KE L HSE+LA++ G+L++P IR+ KNLRVC D
Sbjct: 599 KMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCND 658
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K ISKI+ RE+I+RD +RFHHFK+G CSC DYW
Sbjct: 659 CHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER---LLSPLRVS 446
+ EA+ L+ + + +D T + ++ AC + L+ K +H +V R L+ V
Sbjct: 194 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 253
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQA 505
+ ++ MY C ++ VF ++ R + W+ MI+G+A+NGL E A+ +F + K A
Sbjct: 254 S--ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 311
Query: 506 GLKPDDQIFIGVFSACS-ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
GL P+ V AC +L + +G + + + + ++VDM G L+
Sbjct: 312 GLLPNTTTMASVMPACVHSLAAIAKGK-EIHAYAIRNMLASDITVGSALVDMYAKCGCLN 370
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ +MP +V W L+ C MHG
Sbjct: 371 LSRRVFNEMP-NKNVITWNVLIMACGMHG 398
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T N ++ MY++ +DD+ ++F + +RD+ SW+TMI+ F+++ +A+ F G
Sbjct: 150 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 209
Query: 507 LKPDDQIFIGVFSACSAL 524
++ D V ACS L
Sbjct: 210 VELDGVTIASVLPACSHL 227
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 229/405 (56%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G K A+ + + + D+ TF + AC AL +++H
Sbjct: 32 MIAGYAQNGHCKAALHLFRAMNNEGQRCDMVTFVAAIDACAGLSALVAGRSLHSIAAAAG 91
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L++ + +ST I+ MY++C ++DDA VFS++ ++L SW TMIT F +NG + A+D
Sbjct: 92 LVAHVEIST--AIVNMYAKCGNLDDATIVFSSIRNKNLISWSTMITAFVQNGHTDRALDA 149
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F GL PD F + SACS G G HF+ + D+GI P+M H+ +VD+LG
Sbjct: 150 FLAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFHFDLLVHDFGITPTMDHFKCMVDLLG 209
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
+G L EA E ++ MP PD W L+ CR+H ++E G R AE++ +L
Sbjct: 210 RSGRLLEAEELVQTMPFVPDDVTWNTLLAACRVHKSVERGKRAAEVLLELTSEIPGYYVL 269
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDT-SHPETDKIYA 668
S ++ + +L + + +K + +E+ + HE+ AG+ HP+ +I
Sbjct: 270 LSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQILE 329
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ L MKE GY+P+T VL ++++ KE L HSE+LA++ GL+S+P +R++K
Sbjct: 330 ELKRLSVLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLRVVK 389
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHSA K ISKI GR++I+RD RFHH ++G+CSC DYW
Sbjct: 390 NLRVCSDCHSATKFISKITGRKIIVRDLNRFHHTENGVCSCGDYW 434
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y+ M A + F R+ +SW+ MI G+A+NG + A+ +F G + D
Sbjct: 1 MIAAYARHGRMIHAKTTFDAAPRRNSSSWNAMIAGYAQNGHCKAALHLFRAMNNEGQRCD 60
Query: 511 DQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
F+ AC+ L +V G LH S++ G+V ++ +IV+M G LD+A
Sbjct: 61 MVTFVAAIDACAGLSALVAGRSLH--SIAAAAGLVAHVEISTAIVNMYAKCGNLDDA 115
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 231/398 (58%), Gaps = 21/398 (5%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
+K + + ++K I + T L+ AC + AL + H +V L L+++ + G
Sbjct: 131 IKSVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYV--LKHNLKLNHFVG 188
Query: 451 --ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MYS+C +D A +F + RD ++ MI GFA +G G A+D+F + GL
Sbjct: 189 TALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLA 248
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PDD + +CS +G V EG FESM + YG+ P ++HY +VD+LG G L EA E
Sbjct: 249 PDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEE 308
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN--- 625
+ MPM+P+ +W L+ R+HGNLE+G+ + + QL+P E S ++ N
Sbjct: 309 RVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEP----ETSGNYVLLSNMYA 364
Query: 626 ----------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+L K+ K+ +L+EV +HE+ GD +HP + +IY + +
Sbjct: 365 SINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSR 424
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++ E G+ P T VL DI++E KE+AL HSERLA++ L++S APIRI+KNLRVCGD
Sbjct: 425 RLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGD 484
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH++ K+ISKI RE+I+RD RFHHFK+G CSC DYW
Sbjct: 485 CHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 522
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 231/406 (56%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQC--ISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+DG V+ + +EA+E+ E QC +S D T ++ AC ALE + V ++ R
Sbjct: 248 MIDGYVQAARFREALEMFR--EMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR 305
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MYS+C S++ A VF +M RD +W +I G A NG GE+A+++
Sbjct: 306 QGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEM 365
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + PD+ FIGV +AC+ G V +G F SM + Y I P++ HY I+D+ G
Sbjct: 366 FHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFG 425
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G + EAL+ I++MPM P+ +W L+ CR+HGN E+G+ E + Q+DP N
Sbjct: 426 RAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPE--NSTVY 483
Query: 619 AGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A EK KK +L+E+ +HE+ AGD SHP + +IY
Sbjct: 484 TLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIY 543
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + + GY P+ V ++ +E K++ L HSE+LA++ LLSS IRI+
Sbjct: 544 CKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIV 603
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+C DCH+A+K+IS++ GRE+++RD RFHHF+ G CSC+DYW
Sbjct: 604 KNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ +L + +D+A +F M ERD SW MI G+ + +A+++F + +
Sbjct: 211 VVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGY 562
+ + D+ + V +AC+ LG + G MS+ GI M +V +++DM G
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQ-GI--KMDAFVGNALIDMYSKCGS 327
Query: 563 LDEALEFIEKM 573
++ AL+ + M
Sbjct: 328 IERALDVFKDM 338
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 5/181 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L++A + +AVH HV + ++ Y+ A ++
Sbjct: 42 DAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALL 101
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC-SALGDV 527
S W+ +I+G + +A F +AG P ++ V SAC GDV
Sbjct: 102 SERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDV 161
Query: 528 VEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ GM +H + G++P ++ ++VDM ++ A + + M + V W L+
Sbjct: 162 LLGMQVHGRVVGS--GVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVS-WTSLL 218
Query: 587 N 587
+
Sbjct: 219 S 219
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 234/407 (57%), Gaps = 19/407 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + ++ +++ + ++ I + S + C + AL+ + +H+ V +
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+ ++ MY +C + DA+ +F M ++D+ +W+ MI+G+A++G + A+ +F
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++PD F+ V AC+ G V GM +FESM +DY + P HY +VD+LG
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EAL+ I MP P V+ L+ CR+H N+EL + AE + QL N ++ AG
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL-----NSQNAAG 489
Query: 621 LVPV--------------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
V + + KE K+ + +E+R+KVH +R+ D HPE D I
Sbjct: 490 YVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
+ ++ L +MK AGY PE F LH++++E KE+ LL HSE+LAV+ G + P + I++
Sbjct: 550 HKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQV 609
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH A+K IS+I RE+I+RD RFHHFKDG CSC DYW
Sbjct: 610 FKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G++++A E+ ++EK +S + S ++ CGD LE+A +
Sbjct: 161 MITGYARRGEMEKARELFYSMMEKNEVSWN-AMISGYIE-CGD---LEKASHFFK----- 210
Query: 440 LSPLR-VSTYNGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVD 497
++P+R V + ++ Y + ++ A ++F +MT ++L +W+ MI+G+ +N ED +
Sbjct: 211 VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLK 270
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + G++P+ CS L + G + +SK + + S++ M
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMY 329
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G L +A + E M + DV W +++ HGN
Sbjct: 330 CKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGN 365
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 386 VKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
V+ G + A+ V G+ K I+ + S L+ D + EA H+ + + P
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWN----SLLIGISKDPSRMMEA---HQLFDEIPEPDT 124
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S YN +L Y + + A S F M +D SW+TMITG+A+ G E A ++F
Sbjct: 125 FS-YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 239/438 (54%), Gaps = 10/438 (2%)
Query: 346 NIQNGMMASQVLNNC-KHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQ 404
++ NG++ S NC ++ + E S + L + ++AI++ + ++
Sbjct: 442 HVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRK 501
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
+ D S L+ AC A E+ K VH H+ + V N ++ Y++C S++DA
Sbjct: 502 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDA 561
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
FS + ++ + SW MI G A++G G+ A+D+F + + P+ V AC+
Sbjct: 562 DLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHA 621
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V E +F SM + +GI + +HY ++D+LG G LD+A+E + MP E + VW
Sbjct: 622 GLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGA 681
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNASELAKEKEN 635
L+ R+H + ELG AE + L+P + N + AG+ +L K+ +
Sbjct: 682 LLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKV 741
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
KK + + +E++ +VH + GD SHP IYA + L M +AGY+P LHD+D+
Sbjct: 742 KKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDK 801
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
KE L HSERLAV+ L+S+PA APIR+ KNLR+C DCH A K ISKIV RE+IIRD
Sbjct: 802 SEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRD 861
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHF DG CSC DYW
Sbjct: 862 INRFHHFSDGACSCGDYW 879
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 29/242 (11%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F EA+R + VK + +A+E+ G + + + FS ++ AC ++
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
LE + VH V R V T N ++ MYS+ + A VF + + D+ SW+ I+G
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-------------VEG-M 531
+G + A+++ Q K +GL P+ VF+ S L + G M
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPN------VFTLSSILKACAGAGAGAFALGRQIHGFM 331
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ + S DY V++VDM G LD+A + E +P D+ +W L++ C
Sbjct: 332 IKACADSDDY-------IGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALISGCS- 382
Query: 592 HG 593
HG
Sbjct: 383 HG 384
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H H L S L + N +L YS+C A VF + SW +++T ++ N L
Sbjct: 25 HIHAHLLKSGLLHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALP 84
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSAC--SALGDVVEGMLHFESMSKDYGIVPSMKHY 550
+A+ F + G++ ++ V + LG V + +S D + ++
Sbjct: 85 REALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANAL--- 141
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
V M G G++DEA ++ + + W +M+ DRC++ VE
Sbjct: 142 ---VAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS------AFVKNDRCSDAVE 188
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 234/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
L G + G +EA++ ++K I D T ++ +C + +LEE H
Sbjct: 347 MLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSG 406
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S + VS N ++ +Y +C S++D+ +F+ ++ +D +W +++G+A+ G + + +
Sbjct: 407 LISFITVS--NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGL 464
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F GLKPD FIGV SACS G V +G FESM ++GIVP HY ++D+
Sbjct: 465 FESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFS 524
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G ++EA FI KMP PD W L++ CR +GN+++G AE + +LDP N S
Sbjct: 525 RAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPH--NTASY 582
Query: 619 AGLVPVNASE--------LAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIY 667
L V A++ L K+ +K L + + ++ +++VH + A D S+P +D+IY
Sbjct: 583 VLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIY 642
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + L +M + GY+P+ VLHD+ K + L HSE+LA++ GLL P PIR++
Sbjct: 643 SELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVV 702
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+A K ISKI RE+++RD RFH FKDG CSC D+W
Sbjct: 703 KNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 10/250 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++AI++ ++ + + +D TF ++ ACG AL+E K VH ++ R
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY +C ++ A +VF MT +++ SW M+ G+ +NG E+AV FS
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++ G++PDD V S+C+ L + EG F + + G++ + ++V + G
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGA-QFHARALTSGLISFITVSNALVTLYGKC 424
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG--NLELGDRCAEIVEQLDPSR------ 612
G ++++ ++ + +V W L++ G N +G + + L P +
Sbjct: 425 GSIEDSHRLFNEISFKDEV-TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGV 483
Query: 613 LNEKSKAGLV 622
L+ S+AGLV
Sbjct: 484 LSACSRAGLV 493
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ C ++D+ +F M ERD SW +MITGF +NGL DA+DIF + K
Sbjct: 209 VVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKL 268
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVDMLGST 560
L+ D F V +AC + + EG +H + DY V S ++VDM
Sbjct: 269 ENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS-----ALVDMYCKC 323
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
+ A +KM + +V W ++
Sbjct: 324 KNIKSAEAVFKKMTCK-NVVSWTAML 348
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 231/403 (57%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ EA+ + + + FS ++ AC L K +H +V R
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + ++ MYS+C ++ A +F M D SW +I G A +G G +AV +F +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K+ G+KP+ F+ V +ACS +G V E +F SM+K YG+ ++HY ++ D+LG G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA FI KM +EP VW L++ C +H NLEL ++ AE + +D N + +
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE--NMGAYVLM 552
Query: 622 VPVNAS-----ELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS E+AK +K +K + + +E+++K H + +GD SHP DKI +
Sbjct: 553 CNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ + QM++ GY+ +T VLHD+D+E K E L HSERLAV+ G++++ IR+ KN+
Sbjct: 613 KAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNI 672
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCH A+K ISKI RE+I+RD RFHHF G CSC DYW
Sbjct: 673 RICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S LP FS+ + + K +H +V R V + ++ MY++ ++D+
Sbjct: 245 LSSVLPIFSEYVDVI-------KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VFS + RD SW++++ G+ +NG +A+ +F Q A +KP F V AC+ L
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G LH + +G ++ ++VDM G + A + ++M + +V W
Sbjct: 358 TLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTA 414
Query: 585 LMNLCRMHGN 594
++ +HG+
Sbjct: 415 IIMGHALHGH 424
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM---------- 461
F ++++C L ++VH + RL + T N ++ MY++ M
Sbjct: 107 VFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF 166
Query: 462 --------------------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
D VF M +D+ S++T+I G+A++G+ EDA
Sbjct: 167 DEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDA 226
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIV 554
+ + + LKPD V S DV++G +H + K GI + S+V
Sbjct: 227 LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLV 284
Query: 555 DMLGSTGYLDEA 566
DM + ++++
Sbjct: 285 DMYAKSARIEDS 296
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 233/399 (58%), Gaps = 11/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G AIE+ +++ + T + +++AC LE + VH HV + L
Sbjct: 1 GFAQSGDGVGAIELFMRMKEAGFLSNQGTLTSVLRACTGLVTLEVGRQVHAHVLKYDKDL 60
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ +N +L MY +C S+ DA ++F M +RD+ SW TMI+G A+NG +A+ +F K
Sbjct: 61 IL--HNALLDMYCKCGSLQDADALFGRMPQRDVISWSTMISGLAQNGRSIEALKVFDMMK 118
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G +P+ +GV ACS G V +G +F SM K +GI P +H +VD+LG G L
Sbjct: 119 SEGPRPNHITMVGVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNCMVDLLGRAGKL 178
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-----LNEKSK 618
D+A++FI +M +PD +W L+ CRMH N +L A+ + +L+P L +
Sbjct: 179 DDAVKFIHEMNFQPDSVIWRTLLGACRMHKNADLAAYAAKEILRLEPDDQGARILLSNTY 238
Query: 619 AGLVPVNASE----LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
A L +E + +++ KK ++ +E+ +VH + AGD SHP ++ I + L
Sbjct: 239 ADLRQWADAEKSWKMMRDRGVKKDPGRSWIELGKQVHVFIAGDLSHPCSESIIQELSRLF 298
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+++ GY P+T FVL D+ E KE+ L HSE+LA++ G +++ PIRIMKNLR+CG
Sbjct: 299 SRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLRICG 358
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ K++SK G+ +IIRD RFHHF+DG+CSC DYW
Sbjct: 359 DCHAFAKLVSKSEGKVIIIRDPVRFHHFQDGVCSCNDYW 397
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 239/427 (55%), Gaps = 17/427 (3%)
Query: 363 EDDFAEASRSSQNNGTLEQLDGLVKE----GKVKEAIEVLGLLE-KQCISVDLPTFSQLM 417
E D A+ + N + + L+ GK KEA+E+ L+ + D T +
Sbjct: 318 EYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTL 377
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
AC A++ +H ++++ L ++ MY +C + A VF ++ +D+
Sbjct: 378 SACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVF 437
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
W MI G A +G G+DA+ +FS+ ++ +KP+ F + ACS +G V EG F M
Sbjct: 438 VWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 497
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
YG++P +KHY +VD+LG G L+EA+E IEKMPM P VW L+ C +H N+ L
Sbjct: 498 ELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVL 557
Query: 598 GDR-CAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVR 647
++ C++++E L+P S + K+ +L ++ KK + +EV
Sbjct: 558 AEQACSQLIE-LEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616
Query: 648 SKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG-KEEALLAHS 706
VHE+ GD SHP KIYA + + A+++ GY+P +L +++E KE+AL HS
Sbjct: 617 GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHS 676
Query: 707 ERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
E+LA++ GL+S+ PIRI+KNLRVCGDCHS K++SK+ RE+++RD RFHHF++G
Sbjct: 677 EKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGH 736
Query: 767 CSCRDYW 773
CSC DYW
Sbjct: 737 CSCMDYW 743
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 407 SVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
S D P TF L++A + + L KA H V ++L V N ++ Y++C +
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGL 189
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
+ VF N+ RD+ SW++MIT F + G E+A+++F + + +KP+ +GV SAC+
Sbjct: 190 GYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAK 249
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
D G + ++ I S+ +++DM G +++A +KMP E D+ W
Sbjct: 250 KSDFEFGRWVHSYIERNR-IGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWT 307
Query: 584 KLM 586
++
Sbjct: 308 TML 310
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V+ G +EA+E+ +E Q + + T ++ AC E + VH ++ER
Sbjct: 208 MITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNR 267
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF- 499
++ N +L MY++C S++DA +F M E+D+ SW TM+ G+AK G + A IF
Sbjct: 268 IGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFD 327
Query: 500 --------------SQFKQAG-----------------LKPDDQIFIGVFSACSALGDV- 527
S ++Q G KPD+ + SAC+ LG +
Sbjct: 328 AMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMD 387
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G +H K G+ + S++DM G L +AL + + DV VW ++
Sbjct: 388 LGGWIHV--YIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK-DVFVWSAMIA 444
Query: 588 LCRMHGN 594
MHG+
Sbjct: 445 GLAMHGH 451
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 215/337 (63%), Gaps = 12/337 (3%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MYS+C ++ A +VF NM +++ SW+ MI+G++K+G ++A+ ++ + + G+
Sbjct: 496 TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 555
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P++ F+ + SACS G V EG+ F SM +DY I +HY +VD+LG G L++A E
Sbjct: 556 PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 615
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGL 621
F+EKMP+EP+V W L+ CR+H ++++G A+ + +LDP N + AG
Sbjct: 616 FVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGR 675
Query: 622 VP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+ ++ K K KK + +E+ S++ + AG +HP+T++IY +R L Q K
Sbjct: 676 WKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKG 735
Query: 680 AGYIPETRFVLH---DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
GYIP+T F+L DI +E +EE LL HSERLA+S GL+S P ++ IR+ KNLR+CGDC
Sbjct: 736 LGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDC 795
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K ISKI GR +I RD RFHHF++G CSC DYW
Sbjct: 796 HTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D TF+ L+ C + + + + +H H+ R + ++ MYSEC ++ A
Sbjct: 274 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 333
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F+ M ER+ SW++MI G+ +NG ++A+ +F Q + G+KPD + S+C +L
Sbjct: 334 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 393
Query: 526 DVVEGM-LH---FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK-MPMEPDVD 580
D +G LH + ++ GI+ V +VDM G +D A + ++ + + +
Sbjct: 394 DSQKGRELHNFIVRNTMEEEGILQ-----VVLVDMYAKCGSMDYAWKVYDQTIKKDRNTA 448
Query: 581 VWEKLM 586
+W ++
Sbjct: 449 LWNSIL 454
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 385 LVKEGKVKEAIEVLGLLEKQC---ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++ +V + +E G+ ++ + D TF+ ++ CG ++ + K VH + +
Sbjct: 147 ILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKL--IAC 204
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ T+ N ++ MY++CD + VF M ER+ +W+++I+ A+ G DA+ +F
Sbjct: 205 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 264
Query: 500 SQFKQA--GLKPDDQIFIGVFSACS 522
+ +++ G++PD F + + C+
Sbjct: 265 LRMQESEDGIQPDQFTFTTLLTLCA 289
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMDD---AF 465
LP +S L+Q C D+ + + K++H + + +P IL +Y+ +DD A
Sbjct: 72 LP-YSSLIQDCIDSNSFQRGKSIHTQMISNGYNP-DAYLMTKILMLYARSGCLDDLCYAR 129
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F M ER+LT+W+TMI +A+ +A IF + + G+ PD+ F C AL
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 243/433 (56%), Gaps = 23/433 (5%)
Query: 364 DDFAEASRSSQNNGTLEQL------------DGLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A+A R + G E L G + G +EA+E+ L+++ +S +
Sbjct: 154 DMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYV 213
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ L+ A AL+ K VH HV R P V N ++ MYS+C +++ A +F+NM
Sbjct: 214 TYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNM 273
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEG 530
R + SW+ M+ G++K+G G + V +F ++ +KPD F+ V S CS G +G
Sbjct: 274 PVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKG 333
Query: 531 MLHF-ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+ F E M+ I ++HY ++D+LG G ++EA E I+KMP EP +W L+ C
Sbjct: 334 LEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGAC 393
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP--VNASELAKEKENKKLAS 640
R+H N +G+ + +++P N + AG N EL EK K
Sbjct: 394 RVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPG 453
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
++ +E+ +H + A D SHP ++++ +R L + KE+GY+P+ VL+D+D+E KE+
Sbjct: 454 RSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEK 513
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
LL HSE+LA++ GL+S+ P+R++KNLR+C DCH+ K +SK+ GR++ IRD RFH
Sbjct: 514 ILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFH 573
Query: 761 HFKDGLCSCRDYW 773
H G+CSC DYW
Sbjct: 574 HVAGGICSCGDYW 586
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
++ L+ C + +A+ E + VH H+ + L P+ +ST ++ +Y++C+ + A VF
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTR--LIILYTKCECLGCARHVFDE 70
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M ER++ SW MI+G+++ G +A+ +F Q ++ +P++ F V S+C+ G
Sbjct: 71 MRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130
Query: 531 -MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+H ++Y V S S++DM G + EA E +P E DV
Sbjct: 131 RQIHSHIFKRNYENHIFVGS-----SLLDMYAKAGRIHEARGVFECLP-ERDV 177
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ +C E + +H H+ + + + +L MY++ + +A VF +
Sbjct: 113 TFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECL 172
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ERD+ S +I+G+A+ GL E+A+++F + ++ G+ + + + +A S L + G
Sbjct: 173 PERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGK 232
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + +++ S++DM G L+ A + MP+ + W ++
Sbjct: 233 QVHSHVLRCELPFYVVLQN--SLIDMYSKCGNLNYARKIFNNMPVRTVIS-WNAML 285
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 246/430 (57%), Gaps = 21/430 (4%)
Query: 360 CKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
CK D A Q+ + + G + G+ EA+ ++ + + D T+ +
Sbjct: 385 CKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSV 444
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ A + AK +H V R V ++ MY++C ++ A +F M+ER +
Sbjct: 445 ITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
T+W+ MI G+ +G+G+ A+++F + ++ ++P+ F+ V SACS G V G+ F
Sbjct: 505 TTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHM 564
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
M ++Y I PSM HY ++VD+LG G L+EA +FI +MP++P V+V+ ++ C++H N+
Sbjct: 565 MKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVN 624
Query: 597 LGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKEN-------------KKLASQNL 643
++ AE + +L+P E ++ N A E +K ++
Sbjct: 625 FAEKVAERLFELNP----EDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
+E++++VH + +G T+HP + KIYA + L Q+KEAGY+P+T +L ++ + KE+ L
Sbjct: 681 VEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLS 739
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
+HSE+LA+S GLL++ A I + KNLRVC DCH+A K IS + GRE+I+RD +RFHHFK
Sbjct: 740 SHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFK 799
Query: 764 DGLCSCRDYW 773
+G CSC DYW
Sbjct: 800 NGACSCGDYW 809
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 17/234 (7%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+D V+ KEA+ + +L++ D+ L AC D LE + +H+ L
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL-HACADLGDLERGRFIHKLSVEL 366
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ MY +C +D A S+F + R + SW+ MI GFA+NG +A++ F
Sbjct: 367 ELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYF 426
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
SQ + +KPD ++ V +A + L + G++ + K+ + ++ V
Sbjct: 427 SQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTAL------V 480
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
DM G + A I M E V W +++ HG +G E+ E++
Sbjct: 481 DMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---IGKAALELFEEM 530
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K + +A++ + + + F+ L++ CGD L K +H + +
Sbjct: 106 MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + G+ MY++C + +A VF M ERDL SW+T++ G+++NG+ A+++ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVN 225
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ LKP + V A SAL + G +H +M + + ++ ++VDM
Sbjct: 226 LMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIA--TALVDMYAK 283
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L A + M +E +V W +++
Sbjct: 284 CGSLKTARLLFDGM-LERNVVSWNSMID 310
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G + A+E++ L+ ++ + T ++ A + + K +H + R
Sbjct: 210 GYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDS 269
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+ ++ MY++C S+ A +F M ER++ SW++MI + +N ++A+ IF +
Sbjct: 270 LVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML 329
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG 530
G+KP D +G AC+ LGD+ G
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERG 356
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 218/374 (58%), Gaps = 9/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN-GILKMYSECDSMDDAFSV 467
D F+ L+QAC A E + H ++ GI+ MY +C ++ A V
Sbjct: 114 DRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEV 173
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M+ERD +W T+I+G+A +G E+++ +F + +Q G KPD + V S CS G V
Sbjct: 174 FDGMSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLV 233
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G F ++K++G+ P KHY ++D+LG +G L+ A I +MP + W +
Sbjct: 234 EQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA 293
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL---- 643
C++H + E G R AE V +L+P S + + ++ + + L
Sbjct: 294 ACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDP 353
Query: 644 ----LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+EV S+VHE+ AGD SHP +IY L+ L QM+ +GY+P+T+ VL ++ +E KE
Sbjct: 354 GRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKE 413
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
L HSE+LA++ GLLS+PA + +RI+KNLRVCGDCH+A K +S+I GRE+ +RD++RF
Sbjct: 414 RLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRF 473
Query: 760 HHFKDGLCSCRDYW 773
HHF+DG CSC DYW
Sbjct: 474 HHFQDGHCSCGDYW 487
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
++++ + D F + ACG A A L K +H V ++ MY +
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL---KPDDQIFIG 516
+D+A VF + +DL SW +++ +++ L +A+ +F + GL KPD F
Sbjct: 61 CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 517 VFSACSALGDVVEGMLHFESM------SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ AC+ L EG L + S D G++ + I++M G G L A E
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSD-GVLG-----LGIINMYGKCGNLRAAHEVF 174
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ M E D W +++ HG+ E
Sbjct: 175 DGMS-ERDTVAWTTIISGYAHHGHSE 199
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 218/374 (58%), Gaps = 9/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN-GILKMYSECDSMDDAFSV 467
D F+ L+QAC A E + H ++ GI+ MY +C ++ A V
Sbjct: 114 DRSYFAFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEV 173
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M+ERD +W T+I+G+A +G E+++ +F + +Q G KPD + V S CS G V
Sbjct: 174 FDGMSERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLV 233
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G F ++K++G+ P KHY ++D+LG +G L+ A I +MP + W +
Sbjct: 234 EQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLA 293
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL---- 643
C++H + E G R AE V +L+P S + + ++ + + L
Sbjct: 294 ACKVHSDTERGKRAAEKVLELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDP 353
Query: 644 ----LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+EV S+VHE+ AGD SHP +IY L+ L QM+ +GY+P+T+ VL ++ +E KE
Sbjct: 354 GRSSIEVNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKE 413
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
L HSE+LA++ GLLS+PA + +RI+KNLRVCGDCH+A K +S+I GRE+ +RD++RF
Sbjct: 414 RLLCFHSEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRF 473
Query: 760 HHFKDGLCSCRDYW 773
HHF+DG CSC DYW
Sbjct: 474 HHFQDGHCSCGDYW 487
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
++++ + D F + ACG A A L K +H V ++ MY +
Sbjct: 1 MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL---KPDDQIFIG 516
+D+A VF + +DL SW +++ +++ L +A+ +F + GL KPD F
Sbjct: 61 CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120
Query: 517 VFSACSALGDVVEGMLHFESM------SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ AC+ L EG L + S D G++ + I++M G G L A E
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSD-GVLG-----LGIINMYGKCGNLRAAHEVF 174
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ M E D W +++ HG+ E
Sbjct: 175 DGMS-ERDTVAWTTIISGYAHHGHSE 199
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 239/421 (56%), Gaps = 17/421 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ AE + +S N + G + G AI + ++K ++ + T + ++ AC
Sbjct: 191 DESAEKTLASWN----AMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQI 246
Query: 424 KALEEAKAVHEHVE--RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
AL + VH ++ R S + VST ++ MY++C S+ A +F M E++ +W+
Sbjct: 247 GALSLGEWVHSLIKSNRFESNVYVST--ALIDMYAKCGSITVARELFDLMPEKNEVTWNA 304
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +G G++A+ +F + +KP F+ V ACS G V EG F +M D+
Sbjct: 305 MISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDF 364
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
G P +HY +VD+LG G L +ALEFI+ MP+EP VW L+ C +H + L
Sbjct: 365 GFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVA 424
Query: 602 AEIVEQLDPSRL-------NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHE 652
+E + +LDP + N S P AS ++AK+K K L+E+ H
Sbjct: 425 SEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHV 484
Query: 653 YRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVS 712
+ +GD SHP++ IYA + L +M EAG+ ET VLHD+++E KE + HSE+LA++
Sbjct: 485 FTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIA 544
Query: 713 HGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
GL+S+ A IRI+KNLRVC DCH+ K +SKI R +++RDA RFHHFKDGLCSC DY
Sbjct: 545 FGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDY 604
Query: 773 W 773
W
Sbjct: 605 W 605
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S + +Y + M A +F E+ L SW+ MI+G +NGL + A+ +F ++
Sbjct: 168 SVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKN 227
Query: 506 GLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+ P+ + SAC+ +G + G +H S+ K ++ +++DM G +
Sbjct: 228 NVNPNPVTVTSILSACAQIGALSLGEWVH--SLIKSNRFESNVYVSTALIDMYAKCGSIT 285
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
A E + MP + +V W +++ +HG+
Sbjct: 286 VARELFDLMPEKNEVT-WNAMISGYGLHGH 314
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G VK +++I V G ++ DL T ++ A + + L+ + +
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS G++ ++S+C ++ A +F + ++DL S + MI+GF NG ED+V +F
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALG 525
+ +G + +G+ S G
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFG 146
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 230/396 (58%), Gaps = 18/396 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ ++ + T ++ C AL++ + +H H+ + + +
Sbjct: 390 KEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETAL 449
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C M +A SVF M +RD+ W++M+ +A++G ++ + +F+Q + G+K D
Sbjct: 450 INMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADA 509
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V SA S G V +G +F +M +D+ I P+ + Y +VD+LG G + EA++ +
Sbjct: 510 VSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVL 569
Query: 572 KMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---- 626
K+ PD +W L+ CR H + AE V + DPS S A +V N
Sbjct: 570 KLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSH----SGAYVVLSNVYAAA 625
Query: 627 ---------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+L + + KK ++ +E+ ++VHE+ GD SHP IYA + L ++M
Sbjct: 626 GDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEM 685
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+ AGYIP+T+ +LHD++ E KE+ L HSERLA++ GL+S+P P+R++KNLRVC DCH
Sbjct: 686 RAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCH 745
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A K ISK+ GRE+++RD RFH+FKDG CSC+DYW
Sbjct: 746 TATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + G L++ + + TF ++ +L + K +HE V+ ++
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+Y C++ A+ +F +M +D+ +W M +A+NG ++A+ +F + + G +P
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ V C+ L + +G +H + + + M ++++M G G + EA+ E
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRM--EMVVETALINMYGKCGKMAEAMSVFE 467
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
KM + D+ VW ++ HG
Sbjct: 468 KMA-KRDILVWNSMLGAYAQHG 488
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D F L+Q C AK ++ + VH HV +++MY++C S+ +A VF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +D+ +W MI + + G + A+ +F Q ++ + P ++ + +AC++ +
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+GM +H + + + G + ++++M G + A + +++ DV W ++
Sbjct: 123 DGMEIHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMIA 179
Query: 588 LCRMHGNLELG 598
C H L
Sbjct: 180 ACVQHDQFALA 190
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + A GD L E K V+ V + V N + M+ + DA +F +M
Sbjct: 208 TLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDM 267
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+RD+ +W+ +IT + +N +AV +F + +Q G+K +D F+ + + ++L + +G
Sbjct: 268 VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKG 326
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ AC ++L++ +H + + V ++ MY++C S+ A+ F +
Sbjct: 107 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 166
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-----ALGD 526
RD+ SW MI ++ A ++ + + G+ P+ VF+A + G
Sbjct: 167 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK 226
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V G++ M D ++ S V+M G+ G L +A E M ++ DV W ++
Sbjct: 227 FVYGLVSSGVMESDVRVMNSA------VNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVI 279
Query: 587 NL 588
L
Sbjct: 280 TL 281
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 245/404 (60%), Gaps = 12/404 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G + +A+ ++ L+ ++ +D T + ++ AC LE VH R
Sbjct: 631 MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MY++C +D A F M R++ SW++MI+G+A++G G A+ +F+
Sbjct: 691 LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFT 750
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q KQ G PD F+GV SACS +G V EG HF+SM + Y + P ++H+ +VD+LG
Sbjct: 751 QMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRA 810
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-NLELGDRCAEIVEQLDP------SR 612
G + + EFI+ MPM P+ +W ++ CR + N ELG R A+++ +L+P
Sbjct: 811 GDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVL 870
Query: 613 LNEKSKAG--LVPVNASELA-KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L+ AG V + LA + E KK A + + ++ VH + AGD +HPE +KIY
Sbjct: 871 LSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDK 930
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ + +M++ GY+PET++ L+D++ E KEE L HSE+LA++ +L+ + PIRI+KN
Sbjct: 931 LKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELPIRIIKN 989
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K IS IV R++I+RD+ RFHHF G+CSC+DYW
Sbjct: 990 LRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK----AVHEHVER- 438
GL ++ + +EA ++ + K + ++ +++ L+ A + L+E K VH ++ R
Sbjct: 325 GLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRN 383
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L + + N ++ +Y++C+++D+A S+F M +D SW+++I+G N E+AV
Sbjct: 384 ALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVAC 443
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F ++ G+ P I S+C++LG ++ G
Sbjct: 444 FHTMRRNGMVPSKFSVISTLSSCASLGWIMLG 475
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%)
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
D+ +E+A +H + + V N ++ ++ ++ A +F M +++L SW
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+++G+A+NG+ ++A +F AGL P+ AC LG
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 449 NGILKMYSECD-SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG- 506
N ++ MYS C S+DDA VF + + SW+++I+ + + G A +FS ++
Sbjct: 181 NVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREAT 240
Query: 507 ---LKPDDQIFIGVFSACSALGDVVEGMLHFESM---SKDYGIVPSMKHYVSIVDMLGST 560
+P++ F + + +L D G+ E M + V + ++V
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDC--GLTLLEQMLARIEKSSFVKDLYVGSALVSGFARY 298
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL-DPSRLNEKSKA 619
G +D A E+M V + ++ L R H G+ A+I +++ D +N S A
Sbjct: 299 GLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQ----GEEAAKIFKEMKDLVEINASSYA 354
Query: 620 GLVPVNASELAKEKENKK 637
L+ +E + KE K+
Sbjct: 355 VLLSA-FTEFSNLKEGKR 371
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE-DAVDIFSQ 501
L VS N +L +Y+E D M++ VF M E D SW++ I A + A+ F +
Sbjct: 489 LDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLE 548
Query: 502 FKQAGLKPDDQIFIGV 517
QAG KP+ FI +
Sbjct: 549 MMQAGWKPNRVTFINI 564
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 233/403 (57%), Gaps = 26/403 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK EA V + ++ + + P S ++ AC + A + VH
Sbjct: 146 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG------ 199
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ MY++C + A +FS M RD+ SW ++I G A++G E A+ ++
Sbjct: 200 --------NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 251
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+KP++ F+G+ ACS +G V +G F+SM+KDYGI PS++HY ++D+LG +
Sbjct: 252 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 311
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE-IVEQL---DPSR---L 613
G LDEA I MP PD W L++ C+ G ++G R A+ +V DPS L
Sbjct: 312 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 371
Query: 614 NEKSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ + + SE + E E +K + +EVR + + AG+TSHP + I+ L+
Sbjct: 372 SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 431
Query: 671 RGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +M+ GY+P+T ++LHD+D++ KE+ L HSER AV++GLL + PIRI+KN
Sbjct: 432 KKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKN 491
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
LRVCGDCH LK IS+I RE+I+RDA R+HHFK G CSC D+
Sbjct: 492 LRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 534
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-------NGILKMYSECDSMDDA 464
FS L++AC + +++ + VH H VS Y + ++ MY++C ++ A
Sbjct: 44 VFSALVKACANLGSIDHGRQVHCH-------FIVSEYANDEVVKSSLVDMYAKCGLLNSA 96
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+VF ++ ++ SW M++G+AK+G E+A+++F
Sbjct: 97 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 131
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 237/402 (58%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + EA+ + L+ I T ++ +C AL+ K +HE+V++
Sbjct: 203 ITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGF 262
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ M+++C S+ DA S+F M RD +W MI FA +G G A+ +F +
Sbjct: 263 DKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEE 322
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K+ G++PD+ F+G+ ACS G V +G +F SMSK YGI P +KHY +VD+LG G
Sbjct: 323 MKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAG 382
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LN 614
+LDEA F++K+ ++ +W L++ C HGN+E+ R E + +LD + N
Sbjct: 383 HLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSN 442
Query: 615 EKSKAG-LVPVN-ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++ G VN +L K++ K+ + +EV + VHE+ +GD H + ++ +
Sbjct: 443 LYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDE 502
Query: 673 LRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L ++K GY+P+T V H D+++EGKE L HSE+LA++ GLL++P IR+ KNLR
Sbjct: 503 LMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLR 562
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A K+IS I GR+++IRD +RFH F+DG CSC D+W
Sbjct: 563 ICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS L++AC +KAL E +H +L + ++ MY+EC+ M+ A VF M
Sbjct: 132 TFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM 191
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ + S++ +ITG+A++ +A+ +F + + + ++P D + V +C+ LG + G
Sbjct: 192 EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGK 251
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
E + K G +K +++DM G L +A+ E M + D W ++
Sbjct: 252 WIHEYVKKK-GFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVR-DTQAWSAMIVAFAT 309
Query: 592 HGN 594
HG+
Sbjct: 310 HGD 312
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 35/181 (19%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
MD A +F + ++D+ ++ M G+A++ A +F + +GL PDD F + A
Sbjct: 80 MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139
Query: 521 CSALGDVVEGM-LHFES----MSKDYGIVPSMKH-YVSIVDMLGSTGYLD---------- 564
C++ + EGM LH + ++ + I P++ + Y DM + G D
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSY 199
Query: 565 --------------EALEFIEKMP---MEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
EAL ++ +EP DV + +M+ C + G L+LG E V+
Sbjct: 200 NAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS-CALLGALDLGKWIHEYVK 258
Query: 607 Q 607
+
Sbjct: 259 K 259
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 222/371 (59%), Gaps = 10/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + A D AL + + +H R ++ MY++C S+ A ++F +
Sbjct: 279 TLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERL 338
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ + SW+ MITG+A +G +A+D+F + + KPD F+GV SACS G + EG
Sbjct: 339 GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGW 397
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ FE+M +DY I P+++HY +VD+LG +G LDEA I +M + PD VW L+N C++
Sbjct: 398 MFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKI 457
Query: 592 HGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLASQN 642
H N+ELG+ E + +L+P N ++AG +L ++ KK + +
Sbjct: 458 HANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACS 517
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV++KVH + +GDTSHP +D+IY+ + + MKEAGY P T V HD++ + K +
Sbjct: 518 WIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMV 577
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
+HSERLA++ GL+S+P + I KNLR+C DCH A+K ISKI RE+ +RD R+HHF
Sbjct: 578 CSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHF 637
Query: 763 KDGLCSCRDYW 773
KDG+CSC DYW
Sbjct: 638 KDGVCSCGDYW 648
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
E C++ ++ L+Q+C KA++ K +H V ++ +Y CDS+
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A +F + + ++ W+ +I G+A NG E AV ++ Q GL PD+ F V AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+AL + G E + + G + +++DM G + A E +K+ + D +
Sbjct: 187 AALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVL 244
Query: 582 WEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
W ++ +G+ D C + ++ + L + ++AS
Sbjct: 245 WNSMLAAYSQNGH---PDACLSLCSEMVLTGLRPTEATLVTAISAS 287
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++AC A+E + +HEHV + V ++ MY++C + A VF +
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD W++M+ +++NG + + + S+ GL+P + + SA + + +G
Sbjct: 238 LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGR 297
Query: 532 -LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
LH S +++ +K ++VDM G + A E++ ++ V W ++
Sbjct: 298 ELHGLSWRQEFESHDKVK--TALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYA 354
Query: 591 MHGN 594
MHG+
Sbjct: 355 MHGH 358
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 235/422 (55%), Gaps = 40/422 (9%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+E+ + + + + TF+ ++QAC + L +H HV ++ V N +
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 382
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF------------ 499
+ +Y++C M+++ +F+ R+ +W+T+I G + G GE A+ +F
Sbjct: 383 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 442
Query: 500 -------------------SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
Q +KPD F+GV SAC+ G + +G +F SM +D
Sbjct: 443 VTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 502
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
+GI P ++HY +V +LG G+LD+A++ I+++P +P V VW L+ C +H ++ELG
Sbjct: 503 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 562
Query: 601 CAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVH 651
A+ V +++P S + +K + + K K KK + +E + VH
Sbjct: 563 SAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVH 622
Query: 652 EYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAV 711
+ GDTSHPE I ++ L + K+AGYIP VL D++ E KE L HSERLA+
Sbjct: 623 SFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLAL 682
Query: 712 SHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRD 771
S G++ +P+ +PIRIMKNLR+C DCH+A+K ISK+V RE+++RD RFHHF++GLCSC D
Sbjct: 683 SFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGD 742
Query: 772 YW 773
YW
Sbjct: 743 YW 744
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + EAIE+ L ++ ++ F+ +++ E +H + +L
Sbjct: 111 IQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGH 170
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ YS C +D A VF + +D+ SW M+T FA+N ++A+ +FSQ
Sbjct: 171 ESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQ 230
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G KP++ F VF AC L V +H ++ Y + + V+++D+ +
Sbjct: 231 MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL--DLYVGVALLDLYTKS 288
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D+A E++P + DV W ++
Sbjct: 289 GDIDDARRAFEEIP-KKDVIPWSFMI 313
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ + +AC +A + K+VH + L + +L +Y++ +DDA F +
Sbjct: 242 TFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEI 301
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
++D+ W MI +A++ ++AV++F Q +QA + P+ F V AC+ + + G
Sbjct: 302 PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGN 361
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + G+ + +++D+ G ++ ++E + P DV W ++
Sbjct: 362 QIHCHVIK--IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDV-TWNTVIV--- 415
Query: 591 MHGNLELGD 599
G+++LGD
Sbjct: 416 --GHVQLGD 422
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
++ +Q C K +H + + L + +N +L MY + D + DA +F M
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEM 99
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF-----SACSALG 525
ER+ S+ T+I G+A++ +A+++F + + G + + +F + + C LG
Sbjct: 100 PERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELG 158
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 233/404 (57%), Gaps = 27/404 (6%)
Query: 392 KEAIEVLGLLEK------QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPL 443
K +VL L +K +C+ D T +QAC + AL+ K VH+ ++ L L
Sbjct: 193 KRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 252
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+S N ++ MYS C SMD A+ VF+ M ER++ SW MI+G A NG G++A++ F++
Sbjct: 253 NLS--NTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEML 310
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM-SKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G+ P++Q G+ SACS G V EGM+ F+ M S ++ I P++ HY IVD+LG
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARL 370
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
LD+A I+ M M+PD +W L+ CR+HGN+ELG+R ++ L + E L+
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGER---VIAHLIEFKAEEAGDYVLL 427
Query: 623 PVNASELAKEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S + K ++ +L S + +E++ VHE+ D SHP ++IY ++
Sbjct: 428 LNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 671 RGLRAQMKEAGYIPETRFVLHDID-QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ Q+K AGY+ E LH++D +E K AL HSE+LA++ G+L +P IR+ KN
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKN 547
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR C DCH+ K +S + R +I+RD RFHHFK G CSC D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK---QAGL 507
++ +YS C++ DA VF + +RD SW+ +I+ + +N D + +F + K +
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCV 213
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY----GIVPSMKHYVSIVDMLGSTGYL 563
KPD+ + AC+ L G L F D+ G+ ++ ++V M G +
Sbjct: 214 KPDNVTCLLALQACANL-----GALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
D+A E +M E +V W +++ M+G
Sbjct: 269 DKAYEVFNRMR-ERNVVSWTAMISGLAMNG 297
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 241/432 (55%), Gaps = 26/432 (6%)
Query: 364 DDFAEASRSSQNNGTLEQLD------------GLVKEGKVKEAIEVLGLLEKQCISVDLP 411
D +A R +QL+ G ++G + + + +++
Sbjct: 208 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHF 267
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S + A ALE+ K VH H+ + L N IL MY++ SM DA VF +
Sbjct: 268 TYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV 327
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ +W++M+T FA+ GLG +AV F + ++ G+ + F+ + +ACS G V EG
Sbjct: 328 DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGK 387
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+ M K+Y + P + HYV++VD+LG G L++AL FI KMPM+P VW L+ CRM
Sbjct: 388 QYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRM 446
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLAS 640
H N ++G A+ V +LDP + L + AS ++ K KK +
Sbjct: 447 HKNAKIGQFAADHVFELDPD--DTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPA 504
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ + VH + A D +HP +++IY + Q+++AGY+P T +VL +D++ ++
Sbjct: 505 CSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQA 564
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE++A++ L++ P A IRIMKN+R+CGDCHSA + ISK+ RE+++RD RFH
Sbjct: 565 KLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFH 624
Query: 761 HFKDGLCSCRDY 772
HF G CSC DY
Sbjct: 625 HFSSGSCSCGDY 636
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E LGLL P TF+ L++A G + + + +H + V + +L
Sbjct: 148 EALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALL 207
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C MD A +VF + ++ SW+ +I GFA+ G GE + +F++ ++ G +
Sbjct: 208 DMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHF 267
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFI 570
+ VFSA + +G + +G M K + +V +I+DM +G + +A +
Sbjct: 268 TYSSVFSAIAGIGALEQGKWVHAHMIKSG---ERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
+++ + DV W ++ +G
Sbjct: 325 DRVD-KKDVVTWNSMLTAFAQYG 346
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ L+ AC ++L++A+A+H H+ V N ++ +Y +C ++ DA VF M
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF-----SACSALGDV 527
RD+ SW ++I G+A+N + ++A+ + + KP+ F + SA S +G+
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 528 VEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ + D YV +++DM G +D A+ +++ + V W L
Sbjct: 187 IHALTVKYDWHDDV--------YVGSALLDMYARCGRMDMAIAVFDQLESKNGVS-WNAL 237
Query: 586 M 586
+
Sbjct: 238 I 238
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 241/405 (59%), Gaps = 19/405 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G+ AIE+ ++ + ++ D T ++ ACG ALE V +
Sbjct: 364 MIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN 423
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +S +N ++ MYS C SM+DA VF M RD+ S++T+I+GFA +G G +A+++
Sbjct: 424 QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 483
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S K+ G++PD FIGV +ACS G + EG FES+ KD P++ HY +VD+LG
Sbjct: 484 STMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGR 538
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L++A +E+MPMEP V+ L+N R+H +ELG+ A + +L+P N +
Sbjct: 539 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPD--NSGNFI 596
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS E K+ KK + +E K+H++ D SH +D IY
Sbjct: 597 LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQ 656
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+ LR +M+EAGYI + VL D+++E KEE + HSE+LA+ + LL S A A IR++K
Sbjct: 657 LLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 716
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH+A+K+ISK+ GR +I+RD RFH F DGLCSC+DYW
Sbjct: 717 NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+ ++ Y++ ++ A F M ER + SW+ M++G+A+NGL E+ + +F +
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVN 253
Query: 505 AGLKPDDQIFIGVFSACSALGD 526
AG++PD+ ++ V SACS+ GD
Sbjct: 254 AGIEPDETTWVTVISACSSRGD 275
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 227/394 (57%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EAI++ + + D + ++ AC + ++ + +H + + +S
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C S+ DA F NM RD+ SW +I G+A+NG G+ ++ + Q G K
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD FIG+ ACS G + G +FE+M K YGI P +HY ++D+LG +G L EA
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKSKAGLV 622
+ +M + PD VW+ L+ CR+H LELG+ A+ + +L+P L+ A
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360
Query: 623 PVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+A+ + + ++ + + + +E SKV + + D +HP ++IY+ I + +KE
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY+P+ F LHD D E KE L HSE+LAV+ GLL+ P APIRI KNLRVCGDCH+A
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K SK+ R +I+RD+ FHHF +G CSC DYW
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+EG ++A+ + + + +D T ++ + K ++ A +VH + +
Sbjct: 15 GCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEA 74
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ MY++ +D A VFS M ++D+ SW +++TG++ NG E+A+ +F + +
Sbjct: 75 YKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMR 134
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G+ PD V SAC+ L + G ++ K G+ S+ S+V M G +
Sbjct: 135 ISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSVDNSLVTMYAKCGSI 193
Query: 564 DEALEFIEKMPMEPDVDVWEKLM 586
+A + MP DV W L+
Sbjct: 194 VDANRAFDNMPTR-DVISWTALI 215
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
D SW+++I G + G EDA+ F + + +K D+ V ++ +++ V++ +
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASM-KVMQNAISV 63
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G +++DM G LD A+ KM ++ DV W L+
Sbjct: 64 HCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKM-VDKDVVSWTSLVT 115
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 230/394 (58%), Gaps = 9/394 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EA+++ ++ I D S L+ AC + A E+ K +H H + +
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFAS 524
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C S++DA FS + R + SW MI G+A++G G++A+ +F+Q + G+
Sbjct: 525 NSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVP 584
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ + V AC+ G V EG +FE M +GI P+ +HY ++D+LG +G L+EA+E
Sbjct: 585 PNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVE 644
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGL 621
+ +P E D VW L+ R+H N+ELG + A+++ L+P + N + AG+
Sbjct: 645 LVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGM 704
Query: 622 V--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+ K+ + KK + +E++ KV+ + GD SH +D+IYA + L + +
Sbjct: 705 WENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSK 764
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY +H++D+ KE+ L HSE+LAV+ GL+++P PIR+ KNLR+C DCH+
Sbjct: 765 AGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTF 824
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K + KIV RE+I+RD RFHHFKDG CSC DYW
Sbjct: 825 FKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G V+ G V+EA+ V + + + TF +++AC + L + VH
Sbjct: 54 LSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGF 113
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C +DD+ +F + ER++ SW+ + + + ++ L +AV +F +
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173
Query: 502 FKQAGLKPDDQIFIGVFSACSAL--GDV---VEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++G+ P++ + +AC+ L GD+ + G++ + D ++ VDM
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANAL------VDM 227
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
G ++ A+ + + PDV W ++ C +H
Sbjct: 228 YSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAGCVLH 262
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 111/241 (46%), Gaps = 7/241 (2%)
Query: 358 NNCKHEDDFAEASRSSQNNGTLEQ---LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
+ C+ DD A S + + G + G +A+ + + + I + T S
Sbjct: 330 SKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLS 389
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
++++ +A++ K +H + N +L Y +C+ +D+A +F T
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH 533
DL ++ +MIT +++ G GE+A+ ++ Q + A +KPD I + +AC+ L +G LH
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH 509
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++ +G + + S+V+M G +++A ++P V W ++ HG
Sbjct: 510 VHAIK--FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS-WSAMIGGYAQHG 566
Query: 594 N 594
+
Sbjct: 567 H 567
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++AC E + +H + ++ + + G++ MYS+C+ MDDA + +M
Sbjct: 286 TLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM 345
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ +W+ +I+G+++ G DAV +FS+ + + V + ++L ++
Sbjct: 346 PKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASL-QAIKVC 404
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++S GI S++D G ++DEA + E+ WE L+ M
Sbjct: 405 KQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE-------RTWEDLVAYTSM 457
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E +GL ++ S +P + S ++ AC + + + +H + ++ L + N ++
Sbjct: 166 EAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALV 225
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+ ++ A +VF ++ D+ SW+ +I G + + A+ + + K +G +P+
Sbjct: 226 DMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMF 285
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
AC+A+G G LH + D + V +VDM +D+A +
Sbjct: 286 TLSSALKACAAMGFKELGRQLHSSLIKMDAH--SDLFAAVGLVDMYSKCEMMDDARRAYD 343
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK 631
MP + D+ W L++ G + GD LD L K + + N + L+
Sbjct: 344 SMP-KKDIIAWNALIS-----GYSQCGD-------HLDAVSLFSKMFSEDIDFNQTTLST 390
Query: 632 EKENKKLASQNLLEVRSKVH 651
K +AS ++V ++H
Sbjct: 391 VL--KSVASLQAIKVCKQIH 408
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+H H+ + S N ++ +YS+C A + +E D+ SW ++++G+ +NG
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPS 546
E+A+ +F++ G+K ++ F V ACS +G V GM D G V +
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESD-GFVAN 121
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
++V M G LD++ + +E +V W L + C + L C E V
Sbjct: 122 -----TLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFS-CYVQSEL-----CGEAV- 168
Query: 607 QLDPSRLNEKSKAGLVP 623
E ++G++P
Sbjct: 169 ----GLFKEMVRSGIMP 181
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 229/384 (59%), Gaps = 33/384 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ L S LR S ++ MY++C ++ A
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTS----LIDMYAKCGDIEAAH 424
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF+++ + L+SW+ MI GFA +G + A DIFS+ ++ G++PDD F+G+ SACS G
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSG 484
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F +M++DY I P ++HY ++D+LG +G EA E I M MEPD +W L
Sbjct: 485 MLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSL 544
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPS----------------RLNEKSKAGLVPVNASEL 629
+ C++ GN+ELG+ A+ + +++P R NE +K L
Sbjct: 545 LKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKI-------RAL 597
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
+K KK+ + +E+ S VHE+ GD HP +IY ++ + +++AG++P+T V
Sbjct: 598 LNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
L ++++E KE AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI R
Sbjct: 658 LQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKR 717
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E+I RD RFHHF+DG+CSC DYW
Sbjct: 718 EIIARDRTRFHHFRDGVCSCNDYW 741
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 16/306 (5%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H L Y + +H + S Y Q NG + + +R+ + ++P+ SY+ I+
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQ--NG---RLEDARKVFDRSPHR-DVVSYTALIKGY 210
Query: 351 MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDL 410
+ + K D+ S N + G + G KEA+E+ + K I D
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWN----AMISGYAETGNYKEALELFKEMMKTNIRPDE 266
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T ++ AC + ++E + VH ++ + N ++ +YS+C ++ A +F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ +D+ SW+T+I G+ L ++A+ +F + ++G +P+D + + AC+ LG + G
Sbjct: 327 LLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIG 386
Query: 531 M---LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ + K S++ S++DM G ++ A + + + + W ++
Sbjct: 387 RWIHVYIDKRLKSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIF 443
Query: 588 LCRMHG 593
MHG
Sbjct: 444 GFAMHG 449
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL------------------------------LS 441
TF L+++C +KA +E + +H HV +L S
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS 195
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R V +Y ++K Y+ ++ A +F + +D+ SW+ MI+G+A+ G ++A+++F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SAC+ G + G S D+G ++K S++D+
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGR-QVHSWIDDHGFGSNLKIVNSLMDLYSKC 314
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L+ A E + + DV W L+
Sbjct: 315 GELETACGLFEGL-LYKDVISWNTLI 339
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/409 (38%), Positives = 238/409 (58%), Gaps = 23/409 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHV--ER 438
L G + G+ + AI++ G L K I + TFS ++ C A + + K H R
Sbjct: 70 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 129
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L VS+ +L MY++ +++ A VF E+DL SW++MI+G+A++G A+D+
Sbjct: 130 LDSSLCVSS--ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 187
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + K+ +K D FIGVF+AC+ G V EG +F+ M +D I P+ +H +VD+
Sbjct: 188 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 247
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L++A++ IE MP +W ++ CR+H ELG AE + + P E S
Sbjct: 248 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP----EDSA 303
Query: 619 AGLVPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
A ++ N +L E+ KK + +EV++K + + AGD SHP D+
Sbjct: 304 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 363
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY + L ++K+ GY P+T +VL DID E KE L HSERLA++ GL+++P +P+
Sbjct: 364 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 423
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF-KDGLCSCRDYW 773
I+KNLRVCGDCH +K+I+KI RE+++RD+ RFHHF DG+CSC D+W
Sbjct: 424 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L Y + +++A VFS + ++D+ +W M+ G+A+ G E A+ +F + + G+K
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P++ F + + C+A + F + + S+ +++ M G ++ A E
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHG 593
+ K E D+ W +++ HG
Sbjct: 156 -VFKRQREKDLVSWNSMISGYAQHG 179
>gi|302781198|ref|XP_002972373.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
gi|300159840|gb|EFJ26459.1| hypothetical protein SELMODRAFT_97177 [Selaginella moellendorffii]
Length = 485
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 251/463 (54%), Gaps = 16/463 (3%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ--- 381
D SR + EG +++N +M C DD + RS + +
Sbjct: 25 DLSRGRKIHASLEGCGFQADDHVKNTLM--DFYTKCDSLDDVKKVFRSMGGDAKVVSWTC 82
Query: 382 -LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G V+ G +EA L+E Q I D T++ L+ AC + +L + + +H + L
Sbjct: 83 LIVGCVQLGSYREAFHFFKLMELQGIHADTVTYASLLDACSNLASLSQGRKLHARIAELG 142
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L V IL MYS+C + +A +F + E+++ +W +I +A+NG A+ +F
Sbjct: 143 LLEADVVLQTSILTMYSKCGRLGEARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLF 202
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +QAG K + F+ V ACS G V + +F +M + + P HY IVD+LG
Sbjct: 203 WKMEQAGQKASETTFVSVLYACSHAGLVDDAYYYFTTMKSERKLEPLPGHYGCIVDLLGR 262
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------ 613
G L +A E I++M +W L+ C+ HG+++L +R AE + +LDP
Sbjct: 263 AGRLADAEELIQRMKAPQSGVLWTTLLGACKTHGDMKLAERAAERIRELDPGSATPYVLL 322
Query: 614 -NEKSKAGLVPVNASELAK--EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N S+AG + AS + + + KK A ++ +EVR K+HE+ AGD SHP+ +I +
Sbjct: 323 SNVYSEAGRWDLAASVRKRMDDMKVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLEL 382
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ L A +KEAGY + LH+ ++E KE L HSE+LA+ GLL SP P++++KNL
Sbjct: 383 KRLLALIKEAGYAADKSATLHNAEEEEKEGLLYYHSEKLAMVMGLLHSPRGEPVQVVKNL 442
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K ISK+ R++++RD K+FHHF+ G CSC DYW
Sbjct: 443 RVCSDCHTAAKFISKVEDRQIVLRDTKQFHHFEHGRCSCGDYW 485
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 229/406 (56%), Gaps = 18/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP----TFSQLMQACGDAKALEEAKAVHEHVE 437
++G G+ E + + ++ + DL T ++ AC + AL + VH
Sbjct: 195 MNGFAANGRPNEVLTIF----RETLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFAS 250
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAV 496
++ N ++ +Y++C ++DA+ VF M R + SW ++I G A NG G+DA+
Sbjct: 251 KVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDAL 310
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++F ++ L P D +GV ACS G V +G +F M YGI P ++H +VD+
Sbjct: 311 ELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDL 370
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR---- 612
LG G ++EA +I MP+EP+ VW L+ C MH LELG+ + +LDP
Sbjct: 371 LGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDY 430
Query: 613 --LNEKSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L+ A +A L K +K +L+E+R+ V+E+ GD SHPE+D+IY
Sbjct: 431 VLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIY 490
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + +++ GY+P T VL DI++E KE AL HSERLA++ LL S +PIRI+
Sbjct: 491 QTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIV 550
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH +K+ISK+ RE+I+RD RFHHFK G CSC+DYW
Sbjct: 551 KNLRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
L L ++ D T+ L+QAC AL E +++H + V N ++ Y
Sbjct: 108 LALHRRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGA 167
Query: 458 CDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
C + A VF + ER+L SW++++ GFA NG + + IF + +A L PD +
Sbjct: 168 CGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIV 227
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V +AC+ +G + G + G+V + +++D+ G +++A + E+M +
Sbjct: 228 SVLTACAEIGALTLGR-RVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGV 286
Query: 576 EPDVDVWEKLM 586
V W L+
Sbjct: 287 ARTVVSWTSLI 297
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 241/405 (59%), Gaps = 19/405 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G+ AIE+ ++ + ++ D T ++ ACG ALE V +
Sbjct: 206 MIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN 265
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +S +N ++ MYS C SM+DA VF M RD+ S++T+I+GFA +G G +A+++
Sbjct: 266 QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 325
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S K+ G++PD FIGV +ACS G + EG FES+ KD P++ HY +VD+LG
Sbjct: 326 STMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGR 380
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L++A +E+MPMEP V+ L+N R+H +ELG+ A + +L+P N +
Sbjct: 381 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPD--NSGNFI 438
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS E K+ KK + +E K+H++ D SH +D IY
Sbjct: 439 LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQ 498
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+ LR +M+EAGYI + VL D+++E KEE + HSE+LA+ + LL S A A IR++K
Sbjct: 499 LLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 558
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH+A+K+ISK+ GR +I+RD RFH F DGLCSC+DYW
Sbjct: 559 NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+ ++ Y++ ++ A F M ER + SW+ M++G+A+NGL E+A+ +F +
Sbjct: 105 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM-- 162
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP--SMKHYVSIVDMLGSTGY 562
G + + + SA +GD +S K + +P ++ + S++ G
Sbjct: 163 LGAYRNSVTWNAMISAYMRVGD-------LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQ 215
Query: 563 LDEALEFIEKM----PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
A+E ++M + PD +++ C G LELG+ + +
Sbjct: 216 SAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE 264
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 241/405 (59%), Gaps = 19/405 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G+ AIE+ ++ + ++ D T ++ ACG ALE V +
Sbjct: 332 MIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN 391
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +S +N ++ MYS C SM+DA VF M RD+ S++T+I+GFA +G G +A+++
Sbjct: 392 QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 451
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S K+ G++PD FIGV +ACS G + EG FES+ KD P++ HY +VD+LG
Sbjct: 452 STMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGR 506
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L++A +E+MPMEP V+ L+N R+H +ELG+ A + +L+P N +
Sbjct: 507 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPD--NSGNFI 564
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS E K+ KK + +E K+H++ D SH +D IY
Sbjct: 565 LLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQ 624
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+ LR +M+EAGYI + VL D+++E KEE + HSE+LA+ + LL S A A IR++K
Sbjct: 625 LLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVK 684
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH+A+K+ISK+ GR +I+RD RFH F DGLCSC+DYW
Sbjct: 685 NLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+ ++ Y++ ++ A F M ER + SW+ M++G+A+NGL E+A+ +F +
Sbjct: 194 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVN 253
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG++PD+ ++ V SACS+ GD ++ + I + +++DM G LD
Sbjct: 254 AGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR-IQLNCFVRTALLDMYAKFGDLD 312
Query: 565 EALEFIEKMP 574
A + MP
Sbjct: 313 SARKLFNTMP 322
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 235/403 (58%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + ++A++ ++++ I + T + + C LE + +H +
Sbjct: 326 ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGH 385
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + ++ +Y +C M+ A ++F + RD+ SW+T+I+G++++G GE A++ F
Sbjct: 386 FGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRM 445
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+ PD+ FIGV SACS +G V EG F+SMSK YGI PS++HY +VD+LG G
Sbjct: 446 MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAG 505
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+E FIE+M + P +WE ++ C++HGN++ G++ A+ + +++P + + S L
Sbjct: 506 KFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEP--MMDSSYILL 563
Query: 622 VPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ AS+ L + KK + +EV +VH + + D SHP+ +IYA +
Sbjct: 564 SNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKL 623
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L + GY+P+T VLH++ + K E L HSERLA+S LLS+ A PIRI KNL
Sbjct: 624 DKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNL 683
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCH +K+IS I +E+++RD +RFHHFK G CSC+D W
Sbjct: 684 RICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
++ TF ++++C E K VH H+ + S ++ MY++ ++DA F
Sbjct: 252 NMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAF 311
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ RD+ SW +I+G+A+ E AV F Q ++ G+KP++ S CS + +
Sbjct: 312 DRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLE 371
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G +++ G + ++VD+ G G ++ A E I K + D+ W +++
Sbjct: 372 NGR-QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHA-EAIFKGLISRDIVSWNTIISG 429
Query: 589 CRMHG 593
HG
Sbjct: 430 YSQHG 434
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L+G + G K+ +++ +++ T S +++ C + +L E K +H R S
Sbjct: 23 LNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALR--S 80
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + G ++ MYS+C ++ DA VF+ + D+ +W MITG + G G++A ++F
Sbjct: 81 GCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELF 140
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ G +P+ + S + +GD+ G
Sbjct: 141 HLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL ++G +EA E+ L+ ++ + T S L+ + L +++H + +
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ MY + ++D VF MT DL SW+ +++GF + IF
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGD 526
Q G KP+ FI V +CS+L D
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLD 268
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
M+ A +F M E++ SW+ ++ G+A+ G G+ + +F + K+ K V
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 521 CSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C+ G + EG +LH ++ I + S+VDM G + +AL+ K+ PDV
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLG--CSLVDMYSKCGTVYDALKVFTKIR-NPDV 117
Query: 580 DVWEKLMN 587
W ++
Sbjct: 118 VAWSAMIT 125
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 229/399 (57%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
++ G KEAI + + + TF ++ A A E A H + ++
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY++C + + +F+ M +D SW+ M++G+A +G G+ A+ +FS +++
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQES 728
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
++ D F+ V SAC G V EG F SMS Y I P ++HY +VD+LG G DE
Sbjct: 729 QVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDE 788
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
L FI+ MP+EPD VW L+ CRMH N++LG+ + + +L+P N L +
Sbjct: 789 TLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPR--NPAHFVVLSSIY 846
Query: 626 ASE-------LAKEKEN----KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
A A+ K N KK + +E+++KVH +R GD SHP+ + ++ L L
Sbjct: 847 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 906
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M++ GY+P+ VL ++++E KE L +HSERLA++ LL++P + I+I+KNLRVC
Sbjct: 907 EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 966
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ K ISKI R +I+RDA RFHHF+DG+CSC DYW
Sbjct: 967 DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ LV+ G +EA+ + ++ Q + + T ++ AC D L+ K++H +
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM 461
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ST ++ MY++C A + F+ M+ RD+ +W+++I G+A+ G +A+D+F +
Sbjct: 462 DSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ + + PD +GV AC+ L D+ +G + G +++DM G
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTC-IHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
L A K D W ++
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVII 605
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 34/333 (10%)
Query: 362 HEDDFAEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLEKQCISVDLPTFSQLM 417
H+ D A + S N + + +++ + EA+E+ + ++ + D TF+ ++
Sbjct: 77 HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+AC A L+E H ++R V G++ MYS+ + A VF M +RD+
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV 196
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFES 536
+W+ MI G +++ +AVD F + G++P + +F L ++ + +H
Sbjct: 197 AWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM-----NLCRM 591
+D+ S ++D+ G +D A ++M + DV W +M N C +
Sbjct: 257 FRRDFSSAVSN----GLIDLYSKCGDVDVARRVFDQMVDQDDVS-WGTMMAGYAHNGCFV 311
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKS--KAGLVPVNASELAKEKE------NKKLASQNL 643
LEL D+ +L R+N+ S A L +L K KE +++ S L
Sbjct: 312 E-VLELFDK-----MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ V + G ET+K L GL+ +
Sbjct: 366 VATPLMVMYAKCG-----ETEKAKQLFWGLQGR 393
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 132/308 (42%), Gaps = 32/308 (10%)
Query: 328 RRQYQQNPNEGQYQSYS--GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGL 385
RR + + G YS G++ +A +V + +DD + GT+ + G
Sbjct: 258 RRDFSSAVSNGLIDLYSKCGDVD---VARRVFDQMVDQDDVSW--------GTM--MAGY 304
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPL 443
G E +E+ ++ + ++ + A + LE+ K +H +R+ S +
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+T ++ MY++C + A +F + RDL +W +I + G E+A+ +F + +
Sbjct: 365 LVAT--PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+KP+ + + AC+ L + G +H ++ D + ++V M G+
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD--SDLSTGTALVSMYAKCGF 480
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD--RCAEIVEQLDPSRLNEK--SK 618
AL +M D+ W L+N G ++GD ++ +L S +N +
Sbjct: 481 FTAALTTFNRMS-SRDIVTWNSLIN-----GYAQIGDPYNAIDMFYKLRLSAINPDAGTM 534
Query: 619 AGLVPVNA 626
G+VP A
Sbjct: 535 VGVVPACA 542
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + G AI++ L I+ D T ++ AC L++ +H + +L
Sbjct: 503 INGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGF 562
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKNGLGEDAVDIF 499
N ++ MY++C S+ A +F N T+ +D +W+ +I + +NG ++A+ F
Sbjct: 563 ESDCHVKNALIDMYAKCGSLPSAEFLF-NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSF 621
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + P+ F+ V A + L EGM F + G + + S++DM
Sbjct: 622 HQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLSNTLVGNSLIDMYAK 680
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
G L + + +M + V W +++ +HG+ GDR + + S++
Sbjct: 681 CGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH---GDRAIALFSLMQESQV 730
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +YS D A SVF + W++MI + ++ +A++++ + GL+PD
Sbjct: 69 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPD 128
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F V AC+ ++ EG+ F G+ + +VDM G L A E
Sbjct: 129 KYTFTFVLKACTGALNLQEGVW-FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 571 EKMPMEPDVDVWEKLM 586
+KMP + DV W ++
Sbjct: 188 DKMP-KRDVVAWNAMI 202
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 225/363 (61%), Gaps = 10/363 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+++ L AC LE+ K VH ++ + L N +L MY++ S+ DA +F +
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW++++T +A++G G++AV F + ++ G++P++ F+ V +ACS G + EG
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
++E M KD GIVP HYV++VD+LG G L+ AL FIE+MP+EP +W+ L+N CRM
Sbjct: 384 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 592 HGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASELAKEKEN--KKLASQN 642
H N ELG AE V +LDP N + G A K KE+ KK + +
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ + +H + A D HP+ ++I + A++KE GY+P+T V+ +DQ+ +E L
Sbjct: 503 WVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNL 562
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE++A++ LL++P + I I KN+RVCGDCH+A+K+ SK+VGRE+I+RD RFHHF
Sbjct: 563 QYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHF 622
Query: 763 KDG 765
KD
Sbjct: 623 KDA 625
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
LE I D ++ L++ C K L + + VH H+ + + + N +L MY++C S
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+++A VF M +RD +W T+I+G++++ DA+ F+Q + G P++ V A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 521 CSA 523
+A
Sbjct: 171 AAA 173
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + +L +Y+ MDDA VF + R+ SW+ +I G A+ E A+++F +
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G +P + +F ACS+ G + +G +H + +V + +++DM +G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSI 313
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+A + +++ + DV W L+ HG
Sbjct: 314 HDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342
>gi|215713517|dbj|BAG94654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635568|gb|EEE65700.1| hypothetical protein OsJ_21333 [Oryza sativa Japonica Group]
Length = 382
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 222/371 (59%), Gaps = 11/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +++AC LE + VH HV + L + +N +L MY +C S+ DA ++F M
Sbjct: 14 TLTSVLRACTGLVTLEVGRQVHAHVLKYDKDLIL--HNALLDMYCKCGSLQDADALFGRM 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ SW TMI+G A+NG +A+ +F K G +P+ +GV ACS G V +G
Sbjct: 72 PQRDVISWSTMISGLAQNGRSIEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGW 131
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM K +GI P +H +VD+LG G LD+A++FI +M +PD +W L+ CRM
Sbjct: 132 YYFSSMEKLFGIQPEREHCNCMVDLLGRAGKLDDAVKFIHEMNFQPDSVIWRTLLGACRM 191
Query: 592 HGNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVNASE----LAKEKENKKLASQN 642
H N +L A+ + +L+P L + A L +E + +++ KK ++
Sbjct: 192 HKNADLAAYAAKEILRLEPDDQGARILLSNTYADLRQWADAEKSWKMMRDRGVKKDPGRS 251
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E+ +VH + AGD SHP ++ I + L +++ GY P+T FVL D+ E KE+ L
Sbjct: 252 WIELGKQVHVFIAGDLSHPCSESIIQELSRLFSRVTNLGYTPQTEFVLQDLATEQKEDLL 311
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ G +++ PIRIMKNLR+CGDCH+ K++SK G+ +IIRD RFHHF
Sbjct: 312 KYHSEKLAIAFGTMNAMEGKPIRIMKNLRICGDCHAFAKLVSKSEGKVIIIRDPVRFHHF 371
Query: 763 KDGLCSCRDYW 773
+DG+CSC DYW
Sbjct: 372 QDGVCSCNDYW 382
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 231/396 (58%), Gaps = 13/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
GK EA+E+ ++ + + T L+ ACG+ AL K +H R V
Sbjct: 355 GKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVG 414
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY++C + A F M+ +L SW+ ++ G+A +G ++ +++F Q+G K
Sbjct: 415 SALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F V SAC+ G EG + SMS+++GI P M+HY +V +L G L+EA
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
I++MP EPD VW L++ CR+H NL LG+ AE + L+P+ N + L + AS
Sbjct: 535 IIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPT--NPGNYILLSNIYASK 592
Query: 628 ----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
E+ K K +K + +EV KVH AGD SHP+ I + L QM
Sbjct: 593 GLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQM 652
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K++GY+P+T FVL D++++ KE+ L HSE+LAV GLL++ P++++KNLR+C DCH
Sbjct: 653 KKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCH 712
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ +K+IS++ GRE+ +RD RFHHFKDG+CSC D+W
Sbjct: 713 AVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 4/241 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G G EA+ + ++ Q D T S ++ A G + + VH +V +
Sbjct: 211 MLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQG 270
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +L MY +C + + VF + E ++ S + +TG ++NG+ + A+++F+
Sbjct: 271 LGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFN 330
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+FK ++ + + + ++CS G +E + F M + YG+ P+ S++ G+
Sbjct: 331 KFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGNI 389
Query: 561 GYLDEALE---FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
L E F + + DV V L+++ G ++L RC + + L+ N
Sbjct: 390 SALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVM 449
Query: 618 K 618
K
Sbjct: 450 K 450
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 417 MQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+++C +AL+ + +H L+ V++ + MY +CD + DA +F M +R
Sbjct: 111 IKSCASLRALDPGQQLHAFAAASGFLTDSIVAS--SLTHMYLKCDRILDARKLFDRMPDR 168
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
D+ W MI G+++ GL E+A ++F + + G++P+
Sbjct: 169 DVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPN 204
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 238/406 (58%), Gaps = 16/406 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEK-QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ G EA+E G ++K + + TF ++ A AL++ +H ++
Sbjct: 344 ITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI- 402
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L V Y G ++ +Y++C + +A +F M R W+ +I+G +G G +A+ +
Sbjct: 403 -GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTL 461
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+ +Q G+KPD F+ + +ACS G V +G F+ M Y IVP KHY + DMLG
Sbjct: 462 FSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLG 521
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G LDEA FI+ MP++PD VW L+ CR+HGN+E+G ++ + +LDP +
Sbjct: 522 RAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 581
Query: 614 --NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTS--HPETDKIY 667
N +K G L + + +K + +EV+ V+ + +G+ + HP+ ++I
Sbjct: 582 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQ 641
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A +R L A+++ GY+ + FVL D++ + KE L HSERLA++ G++++P+R P+ I
Sbjct: 642 AELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIY 701
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A K IS+I RE+I+RD+ RFHHFKDG CSC D+W
Sbjct: 702 KNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ A+++ + +S D+ T L A AK++H +V R
Sbjct: 242 ISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGW 301
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + N I+ MY++ +++ A +F +M +D SW+T+ITG+ +NGL +AV+ +
Sbjct: 302 DVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYG 361
Query: 501 QF-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K GLK F+ V A S LG + +GM ++S G+ + ++D+
Sbjct: 362 HMQKHEGLKAIQGTFVSVLPAYSHLGALQQGM-RMHALSIKIGLNVDVYVGTCLIDLYAK 420
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDP----- 610
G L EA+ EKMP W +++ +HG+ L L R + E + P
Sbjct: 421 CGKLAEAMLLFEKMPRR-STGPWNAIISGLGVHGHGAEALTLFSRMQQ--EGIKPDHVTF 477
Query: 611 -SRLNEKSKAGLV 622
S L S AGLV
Sbjct: 478 VSLLAACSHAGLV 490
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
TF L++A A + A +H RL L V T ++ Y + +A+ VF
Sbjct: 72 TFPSLIRA---APSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDE 128
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M+ERD+ +W+ M++G +N +AV +F + G+ D V C LGD V
Sbjct: 129 MSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLA 188
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
++ + +G+ + +++D+ G G L+EA M D+ W +++ C
Sbjct: 189 LV-MHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR-DLVTWNSIISGCE 246
Query: 591 MHG 593
G
Sbjct: 247 QRG 249
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L GL + + EA+ + G + + ++ D T S ++ C A +H + +
Sbjct: 140 MLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHG 199
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ +Y + +++A VF M RDL +W+++I+G + G A+ +F
Sbjct: 200 LDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQ 259
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +G+ PD + + SA + GD LH M + + V + +IVDM
Sbjct: 260 GMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD-VDDIIAGNAIVDMYAK 318
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ A + MP++ V W L+
Sbjct: 319 LSNIEAAQRMFDSMPVQDSVS-WNTLIT 345
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 236/394 (59%), Gaps = 18/394 (4%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPL--RVSTYNG 450
E L L ++ S + P T ++ AC A++ + +H ++++ L + S
Sbjct: 284 EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C ++ A VF++M R L+SW+ MI GFA +G A D+FS+ + ++PD
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPD 403
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
D F+G+ SACS G + G F+SM++DY + P ++HY ++D+LG +G EA E I
Sbjct: 404 DITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMI 463
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--- 627
MPMEPD +W L+ C+ HGNLEL + A+ + +++P N S L + A+
Sbjct: 464 HTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPE--NSGSYVLLSNIYATAGR 521
Query: 628 --ELAKE------KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
++A+ K KK+ + +EV S VHE+ GD HP +IY ++ + Q++E
Sbjct: 522 WEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEE 581
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AG+ P+T VL ++++E KE AL HSE+LA++ GL+S+ + I+KNLRVC +CH A
Sbjct: 582 AGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 641
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISKI RE++ RD RFHHF+DG+CSC DYW
Sbjct: 642 TKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S N + G V+ G+ +EA+E+ + + + D T ++ AC +
Sbjct: 154 DEITERDVVSWN----AMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQS 209
Query: 424 KALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
++E + VH V+ S L++ N ++ +YS+C ++ AF +F ++ +D+
Sbjct: 210 GSIELGRQVHSWVDDDDDDHGFSSSLKI--VNALIDLYSKCGDVETAFGLFEGLSCKDVV 267
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFES 536
SW+T+I G+ L ++A+ +F + ++G P+D + V AC+ LG + G +H
Sbjct: 268 SWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYI 327
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
K G+ S++DM G ++ A + M + + W ++ MHG
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM-LYRSLSSWNAMIFGFAMHG 383
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 35/209 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS-- 469
+F L+++C +KA EE + +H V +L L + ++ MY+ ++DA VF
Sbjct: 66 SFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDAS 125
Query: 470 -----------------------------NMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+TERD+ SW+ MITG+ +NG E+A+++F
Sbjct: 126 SHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFK 185
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLH--FESMSKDYGIVPSMKHYVSIVDML 557
+ + ++PD+ + V SAC+ G + G +H + D+G S+K +++D+
Sbjct: 186 EMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLY 245
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 246 SKCGDVETAFGLFEGLSCK-DVVSWNTLI 273
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 221/373 (59%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ A L++ +H + L V ++ +Y++C + +A +F +M
Sbjct: 374 TFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHM 433
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
R W+ +I G +G G A+ +FSQ +Q +KPD F+ + +ACS G V +G
Sbjct: 434 PRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGR 493
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F+ M YGIVP KHY +VDMLG G LDEA EFI+ MP++PD VW L+ CR+
Sbjct: 494 SFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRI 553
Query: 592 HGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP-VNASE-LAKEKENKKLASQN 642
HGN+E+G ++ + +LDP + N +K G V+A L + + +K +
Sbjct: 554 HGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWS 613
Query: 643 LLEVRSKVHEYRAGDTS--HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+EV+ V + +G + HP+ ++I + L A+MK AGY+P+ FVL D++++ KE+
Sbjct: 614 SMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQ 673
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSERLA++ G++++P P+ I KNLRVCGDCHSA K ISKI RE+I+RDA RFH
Sbjct: 674 ILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFH 733
Query: 761 HFKDGLCSCRDYW 773
HFKDG CSC D+W
Sbjct: 734 HFKDGHCSCGDFW 746
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQA---CGDAKALEEAKAVHEHVERLLSPL-R 444
GKV A+E+ + + + D+ T L A CGD AK+VH +V R +
Sbjct: 248 GKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELG---AKSVHCYVRRRGWDVGD 304
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-K 503
+ N ++ MY++ +D A VF N+ +RD+ SW+T+ITG+ +NGL +A+ I++
Sbjct: 305 IIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHN 364
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
GLKP F+ V A S LG + +GM ++S G+ + ++D+ G L
Sbjct: 365 HEGLKPIQGTFVSVLPAYSYLGGLQQGM-RMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
EA+ E MP W ++ +HG+
Sbjct: 424 VEAMFLFEHMPRR-STGPWNAIIAGLGVHGH 453
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQAC---GDAKALEEAKAVHEHVE 437
L GL + + +A+ +LG + + ++ D T S ++ C GD +AL V+
Sbjct: 139 MLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD-RALALVMHVYAVKH 197
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L L V N ++ +Y + + +A VF M RDL +W+++I+ + G AV+
Sbjct: 198 GLSGELFVC--NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVE 255
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM---LHFESMSKDYGIVPSMKHYVSIV 554
+F ++G+ PD + + SA + GD + + D G + + ++V
Sbjct: 256 LFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGN---AMV 312
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
DM +D A + + +P + DV W L+
Sbjct: 313 DMYAKMSKIDAAQKVFDNLP-DRDVVSWNTLIT 344
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF L++A A A +H RL L P V ++ Y + +A+ VF
Sbjct: 71 TFPPLVRA---APGPASAAQLHACALRLGLLHP-NVFASGSLVHAYLRFGRVAEAYRVFD 126
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M ERD+ +W+ M++G +N DAV + + G+ D V C LGD
Sbjct: 127 EMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRAL 186
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ + +G+ + +++D+ G G L EA M + D+ W +++
Sbjct: 187 ALV-MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR-DLVTWNSIIS 242
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 235/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVER 438
L G + G +EA+++ ++ I D T ++ +C + +LEE H V
Sbjct: 346 MLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSG 405
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S + VS N ++ +Y +C S++D+ +FS M+ D SW +++G+A+ G + + +
Sbjct: 406 LISFITVS--NALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRL 463
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F G KPD FIGV SACS G V +G FESM K++ I+P HY ++D+
Sbjct: 464 FESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFS 523
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L+EA +FI KMP PD W L++ CR H N+E+G AE + +L+P N S
Sbjct: 524 RAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPH--NTASY 581
Query: 619 AGLVPVNASE--------LAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A++ L K +K L + + ++ +++VH + A D S+P +D+IY
Sbjct: 582 ILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIY 641
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + L +M + GY+P+ VLHD+D K + L HSE+LA++ GL+ P PIR++
Sbjct: 642 SELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVV 701
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH+A K ISKI RE+++RDA RFH FKDG CSC D+W
Sbjct: 702 KNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +EAI++ + + + +D TF ++ ACG AL+E K VH ++ R
Sbjct: 245 MIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY +C S+ A +VF M +++ SW M+ G+ +NG E+AV IF
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFC 364
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G++PDD V S+C+ L + EG F + G++ + ++V + G
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGA-QFHCRALVSGLISFITVSNALVTLYGKC 423
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++++ +M +V W L++
Sbjct: 424 GSIEDSHRLFSEMSYVDEVS-WTALVS 449
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ C ++D+ +F +M E+D SW MI GF +NGL +A+D+F + +
Sbjct: 208 VVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRL 267
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY 541
L+ D F V +AC + + EG +H + DY
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 305
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ ++ A+E ++ + + + T ++ AC ALE + VH ++ +
Sbjct: 249 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + N ++ MYS C S+D+A +VF M +RD+ +++TMI+G + NG A+++F
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
L+P + F+GV +ACS G V G F SM++DYG+ P ++HY +VD+LG
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EA + I M M PD + L++ C+MH NLELG++ A+++E D + + +
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLE--DRGQADSGTYVL 486
Query: 621 LVPVNAS-----ELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L V AS E A+ + K A + +EV +++HE+ GD HP ++IY
Sbjct: 487 LSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEK 546
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++ GY PE VL DI+ KE AL HSERLA+ +GL+S+ IR+MKN
Sbjct: 547 LEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKN 606
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCHSA+K+I+KI R++++RD RFH+F++G CSC DYW
Sbjct: 607 LRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCK--HEDD 365
N S DQ +S+ Q P Q +G+ Q+ M ++L +C H D
Sbjct: 40 NPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR-NGHSQDPFMVFELLRSCSKCHAID 98
Query: 366 FAEASRSSQNNGTL----EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG 421
+A +N + +DG V G +AI++ + I D + +++ACG
Sbjct: 99 YASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACG 158
Query: 422 DAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE------- 473
AL E + VH +L LS R+ I+++Y +C + DA VF M E
Sbjct: 159 SQLALREGREVHSRALKLGLSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVASTV 217
Query: 474 -----------------------RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+D W MI GF +N A++ F + ++P+
Sbjct: 218 MISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPN 277
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + V SACS LG + G M K + I ++ ++++M G +DEA
Sbjct: 278 EFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
++M + DV + +++ M+G
Sbjct: 337 DEMK-DRDVITYNTMISGLSMNG 358
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 224/399 (56%), Gaps = 9/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ K +EA ++ ++ I D +FS ++ + AL + A+H+ + +L
Sbjct: 422 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 481
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MY++C S+ DA+ VF + + ++ SW MI+ + +G +++F
Sbjct: 482 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 541
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P F+ V SACS G V EG+ HF SM K + + P +HY +VD+LG G+L
Sbjct: 542 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 601
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
DEA FIE MPM+P VW L+ CR +GNL++G AE + +++P +
Sbjct: 602 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 661
Query: 624 VNASELAKEKENKKLASQN---------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ L + E ++L N ++V++ + A D SH +D+IY ++ L
Sbjct: 662 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 721
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+K+ GY+ ET FV + +++ +E+ L HSE+LA++ GLL+ P +PIRI KNLR CG
Sbjct: 722 KLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCG 781
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K+ SKI RE+I+RD RFH F DG CSC DYW
Sbjct: 782 HCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS ++ A + + +H + + + ++ MY++C M A VF M
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 306
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
ER+L SW++MI GF N L + AV +F ++ + P++ V SAC+ +G + G
Sbjct: 307 PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 366
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ YG+VP S++DM + DE ++ + + + DV W L+
Sbjct: 367 R-QVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRDVVTWNVLV 420
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 29/295 (9%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSEC 458
L EK I ++ + S ++ AC + L + VH V + L PL N ++ MY +C
Sbjct: 338 LREKTVIPNEV-SVSSVLSACANMGGLNFGRQVHGVVVKYGLVPL-TYVMNSLMDMYFKC 395
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
D+ +F + +RD+ +W+ ++ GF +N E+A + F ++ G+ PD+ F V
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
+ ++L + +G + + K G V +M S++ M G L +A + E + + +
Sbjct: 456 HSSASLAALHQGTAIHDQIIK-LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHN 513
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN---EKSKAGLVPVNASELAKEKEN 635
V W +++ ++HG CA V +L L+ E S V V ++ +
Sbjct: 514 VISWTAMISAYQLHG-------CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPET-RFV 689
+ LA N ++ K+H+ G PE YA + L + AG++ E RF+
Sbjct: 567 EGLAHFNSMK---KIHDMNPG----PEH---YACMVDL---LGRAGWLDEAKRFI 608
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+N ++ +Y++C ++ A +FS + + +W ++IT + + A+ +F+Q + +
Sbjct: 180 FNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCS 239
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G P+ F + SA +A V+ G S+ +G ++ ++VDM +
Sbjct: 240 GPYPNQFTFSSILSASAATMMVLHGQ-QLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 298
Query: 566 ALEFIEKMPMEPDVDVWEKLM 586
A+ ++MP E ++ W ++
Sbjct: 299 AVRVFDQMP-ERNLVSWNSMI 318
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 228/403 (56%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG V+ ++++ + V L +Q I + TFS L++AC + ALE+ +H V ++
Sbjct: 281 IDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF 340
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MY +C ++ A F + + +W+++++ F ++GLG+DA+ F +
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFER 400
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+KP+ FI + + CS G V EG+ +F SM K YG+VP +HY ++D+LG G
Sbjct: 401 MVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAG 460
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA EFI +MP EP+ W + CR+HG+ E+G AE + +L+P N + L
Sbjct: 461 RLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK--NSGALVLL 518
Query: 622 VPVNASELAKEKEN-----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+E E KKL + ++V K H + A D SH IY +
Sbjct: 519 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKL 578
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L Q+K AGY+P T V D+D KE+ L HSER+AV+ L+S P PI + KNL
Sbjct: 579 DXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 638
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA+K ISK+ GR++I+RD RFHHF DG CSC DYW
Sbjct: 639 RVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 9/217 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG K G+ +EA+ + + +++D + ACG KA + ++VH V +L
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG 237
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N + MYS+ M+ A +VF +E R++ S+ +I G+ + E + +F
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 297
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVDM 556
+ ++ G++P++ F + AC+ + +G LH + M ++ P +VS +VDM
Sbjct: 298 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP----FVSSILVDM 353
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G G L+ A++ +++ +P W L+++ HG
Sbjct: 354 YGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSVFGQHG 389
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
D + ++Q K L K +H + +P T N ++ MYS+C +D A +
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLT-NHLVNMYSKCGELDHALKL 62
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M +R+L SW MI+G ++N +A+ F + G P F AC++LG +
Sbjct: 63 FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++ +GI + ++ DM G + +A + E+MP + +V W +++
Sbjct: 123 EMGK-QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMID 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT---FSQLMQACGDAKALEEAKAVHEHVE 437
+ GL + K EAI + I ++PT FS ++AC ++E K +H
Sbjct: 77 MISGLSQNSKFSEAIRTFCGMR---ICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+ + + + MYS+C +M DA VF M +D SW MI G++K G E+A+
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSAL 524
F + + D + AC AL
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGAL 220
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 227/390 (58%), Gaps = 11/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + +++ D T + +++AC LE + VH HV + L ++ N ++
Sbjct: 236 EALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILN--NALI 293
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C S++DA S FS M E+D+ SW TM+ G A+NG A+++F K++G +P+
Sbjct: 294 DMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYI 353
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+GV ACS G V +G +F SM K +G+ P +HY ++D+LG G LDEA++ I +
Sbjct: 354 TVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHE 413
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN------A 626
M EPD W L+ CR+H N++L A+ + +L+P + N
Sbjct: 414 MECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDV 473
Query: 627 SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+E+ K N +K + +EV ++H + GDTSHP+ ++I + L ++ GY+
Sbjct: 474 AEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYV 533
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T FVL D++ E KE++L HSE+LA+ GL++ +RI KNLR+CGDCH K++
Sbjct: 534 PDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVV 593
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S++ R ++IRD R+HHF+DG+CSC DYW
Sbjct: 594 SRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A++ L L+ ++ + ++ T+S +++AC L + +H + + V + ++
Sbjct: 138 KALKCLILMFREGVRPNMFTYSSVLRAC---DGLPNLRQLHCGIIKTGLESDVFVRSALI 194
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+YS+ +D+A VF M RDL W+++I GFA+N G +A+++F + K+AG D
Sbjct: 195 DVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQA 254
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC+ L + G +H + D ++ + +++DM G L++A
Sbjct: 255 TLTSVLRACTGLALLELGRQVHVHVLKFDQDLILNN----ALIDMYCKCGSLEDANSAFS 310
Query: 572 KMPMEPDVDVWEKLM 586
+M +E DV W ++
Sbjct: 311 RM-VEKDVISWSTMV 324
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+ + +E+ + D T+S+L++ C A++E K VHEH+ ++ N +L
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY + + +++A +F M ER++ SW TMI+ ++ N L + A+ + G++P+
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFT 157
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ V AC L ++ + LH + G+ + +++D+ LD AL ++M
Sbjct: 158 YSSVLRACDGLPNLRQ--LHCGIIKT--GLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213
Query: 574 PMEPDVDVWEKLM 586
P D+ VW ++
Sbjct: 214 PTR-DLVVWNSII 225
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 228/378 (60%), Gaps = 17/378 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ C A+ + K +H + R + ++ + ++ MY++C ++ + VF+ M
Sbjct: 520 TLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM 579
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAG----LKPDDQIFIGVFSACSALGD 526
+++ +W+ +I +G GE+A+++F + +AG KP++ FI VF+ACS G
Sbjct: 580 PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGL 639
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKL 585
+ EG+ F M D+G+ P+ HY +VD+LG G L+EA E + MP E D V W L
Sbjct: 640 ISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSL 699
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASELAKEKEN--- 635
+ CR+H N+ELG+ A+ + L+P+ N S AGL A E+ K
Sbjct: 700 LGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWN-KAMEVRKNMRQMGV 758
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
KK + +E R +VH++ AGD SHP++++++ + L +M++ GY+P+T VLH++D+
Sbjct: 759 KKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDE 818
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
+ KE L HSE+LA++ G+L++P IR+ KNLRVC DCH+A K ISKI+ RE+I+RD
Sbjct: 819 DEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRD 878
Query: 756 AKRFHHFKDGLCSCRDYW 773
+RFHHFK+G CSC DYW
Sbjct: 879 VRRFHHFKEGTCSCGDYW 896
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E I+V GLL + T + +M AC +A +++H + +L N ++
Sbjct: 389 EMIKVAGLLP------NTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALM 442
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ-------- 504
MYS MD + ++F +M RD SW+TMITG+ +G +A+ + + ++
Sbjct: 443 DMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVK 502
Query: 505 ---------AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
KP+ + V C+AL + +G + + + + ++VD
Sbjct: 503 KDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGK-EIHAYAIRNMLASDITVGSALVD 561
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L+ + +MP +V W L+ C MHG
Sbjct: 562 MYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHG 598
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER---LLSPLRVS 446
+ EA+ L+ + + +D T + ++ AC + L+ K +H +V R L+ V
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQA 505
+ ++ MY C ++ VF ++ R + W+ MI+G+A+NGL E A+ +F + K A
Sbjct: 337 S--ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 394
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD-----YGIVPSMK--HYV--SIVDM 556
GL P+ V AC +H E+ S Y + K YV +++DM
Sbjct: 395 GLLPNTTTMASVMPAC----------VHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +D + + M + V W ++
Sbjct: 445 YSRMGKMDISETIFDSMEVRDRVS-WNTMIT 474
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 360 CKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA 419
CK D + + S N+ + L + K ++A+E ++ + + + T + A
Sbjct: 148 CKVFDRITDRDQVSWNSF----IAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALA 203
Query: 420 C---GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
C G L K +H + R+ + T N ++ MY++ +DD+ ++F + +RD+
Sbjct: 204 CSNLGVMHGLRLGKQLHGYSLRV-GDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDM 262
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
SW+TMI+ F+++ +A+ F G++ D V ACS L
Sbjct: 263 VSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 310
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 5/164 (3%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEE 428
+S + T +D L + + E + + +S P F +++A + L+
Sbjct: 51 TSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKT 110
Query: 429 AKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
+ +H + V+ N ++ MY +C + D VF +T+RD SW++ I
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALC 170
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ E A++ F + ++ + V ACS LG V+ G+
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLG-VMHGL 213
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG V+ ++ A+E ++ + + + T ++ AC ALE + VH ++ +
Sbjct: 206 MIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 265
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + N ++ MYS C S+D+A +VF M +RD+ +++TMI+G + NG A+++F
Sbjct: 266 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 325
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
L+P + F+GV +ACS G V G F SM++DYG+ P ++HY +VD+LG
Sbjct: 326 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 385
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+EA + I M M PD + L++ C+MH NLELG++ A+++E D + + +
Sbjct: 386 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLE--DRGQADSGTYVL 443
Query: 621 LVPVNAS-----ELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L V AS E A+ + K A + +EV +++HE+ GD HP ++IY
Sbjct: 444 LSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEK 503
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++ GY PE VL DI+ KE AL HSERLA+ +GL+S+ IR+MKN
Sbjct: 504 LEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKN 563
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCHSA+K+I+KI R++++RD RFH+F++G CSC DYW
Sbjct: 564 LRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 607
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 15/297 (5%)
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCK--HEDD 365
N S DQ +S+ Q P Q +G+ Q+ M ++L +C H D
Sbjct: 23 NPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIR-NGHSQDPFMVFELLRSCSKCHAID 81
Query: 366 FAEASRSSQNNGTL----EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG 421
+A +N + +DG V G +AI++ + I D + +++ACG
Sbjct: 82 YASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACG 141
Query: 422 DAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE----RDL 476
AL E + VH +L LS R+ I+++Y +C + DA VF M E +D
Sbjct: 142 SQLALREGREVHSRALKLGLSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVAKDT 200
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
W MI GF +N A++ F + ++P++ + V SACS LG + G
Sbjct: 201 VCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 260
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M K + I ++ ++++M G +DEA ++M + DV + +++ M+G
Sbjct: 261 MRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTMISGLSMNG 315
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 226/401 (56%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA+++ + + D + AC D L+ K++H + R L
Sbjct: 285 ISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLE 344
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +L MYS+C S++ A +F+ ++ RDL W+ MI +G G DA+ +F +
Sbjct: 345 -FQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQE 403
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KPD F + SA S G V EG F+ M ++GI P+ KH V +VD+L +G
Sbjct: 404 LNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSG 463
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
++EA E + M EP + +W L++ C + LELG+ A+ + + P S
Sbjct: 464 LVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSN 523
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L +K +L K+ +KK+ +L+EV H + D SHP+ +I +I
Sbjct: 524 LYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISK 583
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M++ GY+P T FV HD+D++ KE+ L HSERLA++ GLL++ + I+KNLRV
Sbjct: 584 LSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRV 643
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH A+K ISKIV RE+++RDAKRFHHFKDG CSC DYW
Sbjct: 644 CGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ + AC L+ A+AV V + +L +YS C +M DA VF
Sbjct: 110 DSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVF 169
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV- 527
M +D +W TM+ GF G +A+ ++S+ ++ G+ D+ + +GV AC+ G+
Sbjct: 170 DGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTR 229
Query: 528 ----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
V G M D I S+VDM G+ D A + MP V W
Sbjct: 230 MGASVHGRFLRHGMRMDVVIA------TSLVDMYAKNGHFDVARQVFRMMPYRNAVS-WN 282
Query: 584 KLMN 587
L++
Sbjct: 283 ALIS 286
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ EA+ + + + ++ D ++QAC +VH R
Sbjct: 183 MVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHG 242
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ MY++ D A VF M R+ SW+ +I+GFA+NG ++A+D+F
Sbjct: 243 MRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFR 302
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD-YGIVPSMKHY-----VSIV 554
+ +GL+PD + AC+ +G F + K +G + + +++
Sbjct: 303 EMSTSGLQPDSGALVSALLACADVG--------FLKLGKSIHGFILRRLEFQCILGTAVL 354
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G L+ A + K+ D+ +W ++ C HG
Sbjct: 355 DMYSKCGSLESARKLFNKLSSR-DLVLWNAMIACCGTHG 392
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 231/399 (57%), Gaps = 9/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ G+ +EA+E + ++ + + + AC +A +E+ + VH VE+L
Sbjct: 336 GYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRF 395
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ I+ MYS+ S++DA +F + +++ W TM+ +A +G G A++IFS+ K
Sbjct: 396 DAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMK 455
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ P++ + V SACS G V +G +F M ++YGIVP+ +HY +VD+ G G L
Sbjct: 456 AEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLL 515
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLN 614
D+A FIE+ + + VW+ L++ CR+H ++E +E + QL+ S +
Sbjct: 516 DKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMY 575
Query: 615 EKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ L KE+ +K Q+ + +++ VH + A DTSHP + +IYA + L
Sbjct: 576 ATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLM 635
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++KE GY T V+HDI++E +E +L HSE+LA++ G++S+P +RI KNLRVC
Sbjct: 636 ERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCE 695
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH A+K I++ RE+++RD RFHHFKDG CSC D+W
Sbjct: 696 DCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL++ G EA+ L + + ++ T+S + G + + + +H V +++
Sbjct: 230 VSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRV--VVA 287
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVF---SNMTERDLTSWDTMITGFAKNGLGEDAV 496
L + G ++ MY +C M+ A S+F S+ TE +W TM+ G+ +NG E+A+
Sbjct: 288 VLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEAL 347
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----- 551
+ F + + G+ I V SAC+ G V +G + +G V + H
Sbjct: 348 EFFRRMLREGVPAGQFILTSVASACANAGMVEQG-------RQVHGFVEKLGHRFDAPLA 400
Query: 552 -SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
+IVDM +G L++A I + +V +W ++ HG G EI ++
Sbjct: 401 SAIVDMYSKSGSLEDACR-IFRSAQTKNVALWTTMLCSYASHGQ---GRMALEIFSRMKA 456
Query: 611 SRL 613
++
Sbjct: 457 EKI 459
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 14/176 (7%)
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
+A A KA+H R P G + +A VF R L +W +
Sbjct: 45 EAGACAAKKAIHRQSVRGCVPSSSVIARG----------LHNAHRVFDGTPTRSLPAWTS 94
Query: 482 MITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+I+G A+ G D + F++ + P+ + GV C+ LGDV G
Sbjct: 95 IISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGR-RIHGWIL 153
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
G+ P + +++DM G A M + D W ++ C G+L
Sbjct: 154 RSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMA-QKDATSWNIVIRACLQDGDL 208
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 14/234 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF--SQLMQACGDAKALEEAKAVHEHVERL 439
+ G +EG+ + + + +C + F + +++ C +E + +H + R
Sbjct: 96 ISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRS 155
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V N +L MY++C A F M ++D TSW+ +I ++G D V
Sbjct: 156 GVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDG---DLVGAT 212
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
F ++ L+ D + + S G E + + M + G+ S Y + + G
Sbjct: 213 QLFDESSLR-DVSSWNTIVSGLMRHGHTTEALGRLQQMVRA-GVTFSNYTYSMVFALAGL 270
Query: 560 TGYLDEALEF---IEKMPMEPDVDVWEKLMNL-CR---MHGNLELGDRCAEIVE 606
D + + +E D V LM++ C+ M L + DR ++ E
Sbjct: 271 LSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTE 324
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ ++C +D A +VF M ER + SW ++I A G G++AV +F K
Sbjct: 270 VTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKT 329
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
AG++PDD +FIGV +ACS G V EG +F+SM +YGI P ++HY +VDM G G ++
Sbjct: 330 AGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVE 389
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
A+EFI MPM+P+ +W L+ CR HG LELG+ + P+ +E + L V
Sbjct: 390 RAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYPA--HEANYVMLSNV 447
Query: 625 NA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A SE+ +E KK+ +L+E+ +VHE+ AGD SHP+ +IY ++ +
Sbjct: 448 YALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEM 507
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++K G+I T VL D+D+E KE AL HSE+LA++ LL +P +R++KNLRVC
Sbjct: 508 ARELKHVGHISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVC 567
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K IS + RE+I+RD RFH FK+G CSC D+W
Sbjct: 568 SDCHAAIKCISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 607
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 246/432 (56%), Gaps = 21/432 (4%)
Query: 357 LNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
L +CK + R + G G K+A+EV ++K I + T +
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTER 474
+ A +LE + +H + E S +R+ G ++ MYS+C ++ A VF +
Sbjct: 281 LPAISRLGSLELGEWLHLYAED--SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
++ +W MI GFA +G DA+D F + +QAG++P D +I + +ACS G V EG +F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
M G+ P ++HY +VD+LG +G LDEA EFI MP++PD +W+ L+ CRM GN
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 595 LELGDRCAEIVEQLDP-------SRLNEKSKAGLVPVNASELA------KEKENKKLASQ 641
+E+G R A I+ + P + N + G N SE++ KEK+ +K
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQG----NWSEVSEMRLRMKEKDIRKDPGC 514
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+L+++ +HE+ D SHP+ +I +++ + +++ AGY P T VL ++++E KE
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENV 574
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE++A + GL+S+ PIRI+KNLR+C DCHS++K+ISK+ R++ +RD KRFHH
Sbjct: 575 LHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHH 634
Query: 762 FKDGLCSCRDYW 773
F+DG CSC DYW
Sbjct: 635 FQDGSCSCMDYW 646
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 18/241 (7%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA---C 420
D+F E +R + + L K GK++E ++ GL K D S L++ C
Sbjct: 121 DEFVEPNRFTFPS----VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
Query: 421 G---DAKALEEAKAVHEHVERLLSPLR----VSTYNGILKMYSECDSMDDAFSVFSNMTE 473
G DA+ L + + + + + + +N ++ Y A +F M +
Sbjct: 177 GFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ 236
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-ML 532
R + SW+TMI+G++ NG +DAV++F + K+ ++P+ + V A S LG + G L
Sbjct: 237 RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
H ++D GI +++DM G +++A+ E++P E +V W ++N +H
Sbjct: 297 HL--YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
Query: 593 G 593
G
Sbjct: 354 G 354
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI---FSQFKQAGLKPDDQIFIGV 517
+D A +F+ M +R+ SW+T+I GF+++ + + I + ++P+ F V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
AC+ G + EG ++ YG ++V M G++ +A K +E
Sbjct: 135 LKACAKTGKIQEGK-QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 578 DVDV 581
D+ V
Sbjct: 194 DMVV 197
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 229/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G V+ G+ +EA+ + ++K ++V T ++ AC ALE VH +V
Sbjct: 227 MLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHSYVCSRG 286
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V+ ++ MYS+C + + VF M ER++ +W + ++G A NG+GE+ +++F
Sbjct: 287 MRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFK 346
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + AG++P+ F+ V CS G V EG F+SM + + P ++HY +VD+ G
Sbjct: 347 RMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRA 406
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD+A++FI MP+EP VW L+N R+H N++LG + +++ N+ +
Sbjct: 407 GRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESK--NDAAHVL 464
Query: 621 LVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A + K K KK+ + +EV KVHE+ G SHP I +
Sbjct: 465 LSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTM 524
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GY T+ VL DI++E KE A+ HSE+LA++ GL++ P IRI+KN
Sbjct: 525 LAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKN 584
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH K+ISK+ RE+++RD RFHHFK G CSCRDYW
Sbjct: 585 LRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+ A GD A+ A A ++SP V +L S +D A +F M +RD
Sbjct: 168 MYAAVGDVGAVRAAFA------EIVSP-DVVCVTAMLGALSAGGDVDTARELFDGMPQRD 220
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+W+ M+TG+ + G +A+ +F + ++AG+ + + V +AC+ +G + GM
Sbjct: 221 HVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMW-VH 279
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
S G+ S+ ++VDM G + ++E E M E ++ W ++ M+G
Sbjct: 280 SYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETM-RERNIYTWTSALSGLAMNG-- 336
Query: 596 ELGDRCAEIVEQLD 609
+G+ C E+ ++++
Sbjct: 337 -MGEECLELFKRME 349
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 233/395 (58%), Gaps = 17/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+A+ V + + ++ TF + A + +++ K VH + N +
Sbjct: 530 KQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANAL 589
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y +C S++DA +FS M+ R+ SW+T+IT +++G G +A+D+F Q KQ GLKP+D
Sbjct: 590 ISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
FIGV +ACS +G V EG+ +F+SMS YG+ P HY +VD+LG G LD A F++
Sbjct: 650 VTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVD 709
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA----- 626
+MP+ + +W L++ C++H N+E+G+ A+ + +L+P S + ++ NA
Sbjct: 710 EMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEP----HDSASYVLLSNAYAVTG 765
Query: 627 --------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
++ K++ +K ++ +EV++ VH + GD HP +D+IY + L ++
Sbjct: 766 KWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLS 825
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
+ GY E + H+ +QE K+ HSE+LAV+ GL++ P P+R++KNLRVC DCHS
Sbjct: 826 KIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHS 885
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K S++ RE+++RD RFHHF G CSC DYW
Sbjct: 886 WMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ +EA+ ++ + D + AC KA+ + +H V
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S +N ++ +Y+ C ++AFS+F + +D +W+ +I+GF ++ L + A+ +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ QAG K + FI SA + L D+ +G +H ++ + + + +++ + G
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--ALISLYGK 595
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +++A +M + +V W ++ C HG
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ L G + G KEA + + + S ++ AC K + + +H V +
Sbjct: 113 VAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYK 172
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
N ++ +Y S A VF +M D +++T+I+G A+ G GE A+ I
Sbjct: 173 QAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQI 232
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F + + +GL+PD + +AC+++GD+ +G
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+++ ++ + D T + L+ AC L++ K +H ++ + T +L
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y +C ++ A +F+ ++ W+ M+ + + + +IF Q + G+ P+
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIE 571
+ + C+ G + G S+S G M YVS ++DM G LD+A + +E
Sbjct: 349 YPCILRTCTCTGQIELGE-QIHSLSIKNGFESDM--YVSGVLIDMYSKYGCLDKARKILE 405
Query: 572 KMPMEPDVDVWEKLM 586
M + DV W ++
Sbjct: 406 -MLEKRDVVSWTSMI 419
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 385 LVKEGKVKE---AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
LV G++ + + E+ G ++ I + T+ +++ C +E + +H +
Sbjct: 318 LVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S + VS ++ MYS+ +D A + + +RD+ SW +MI G+ ++ E+A+ F
Sbjct: 378 ESDMYVSGV--LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+ PD+ SAC+ + + +G L + G + + ++V++
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQG-LQIHARVYVSGYAADISIWNTLVNLYAR 494
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +EA ++ + ++ W L++
Sbjct: 495 CGRSEEAFSLFREIEHKDEI-TWNGLIS 521
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y++ + A VF ++ RD SW M++G+A++GLG++A ++SQ +
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 509 PDDQIFIGVFSACS 522
P + V SAC+
Sbjct: 142 PTPYVLSSVLSACT 155
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 233/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DGLV+ G+ A+EV ++++ + + T ++ AC + AL+ + V ++++
Sbjct: 220 MIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHR 279
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L ++ MYS C +D+A VF M E+++ ++++MI GFA +G +AV++F
Sbjct: 280 IELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFR 339
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G P F+GV +ACS G G F SM+KDYGI P ++HY +VD+LG
Sbjct: 340 GLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRL 399
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE-------------IVEQ 607
G L+EA FI M + PD + L++ C++HGNLEL +R A+ I+
Sbjct: 400 GRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLS 459
Query: 608 LDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
S + +A V N E EKE + +EV +++HE+ GD HP+ +KIY
Sbjct: 460 NAYSSSGKWKEAAEVRTNMREEGIEKE----PGCSSIEVNNEIHEFLLGDLRHPQKEKIY 515
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L ++ GY P T VLHDI++ KE AL HSERLA+ +GL+S+ +R++
Sbjct: 516 KKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVV 575
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH +K+IS I R++++RD RFHHF++G+CSC DYW
Sbjct: 576 KNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 30/272 (11%)
Query: 348 QNGMMASQVLNNCKHEDDFAEASR---SSQNNGT---LEQLDGLVKEGKVKEAIEVLGLL 401
Q+ + ++L C + + AS+ +QN +DGLV + I + +
Sbjct: 62 QDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQM 121
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
+ D + +++ACG AL+E + VH V +L S ++++Y +C +
Sbjct: 122 INSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAF 181
Query: 462 DDAFSVFSNMTERDLTS------------------WDTMITGFAKNGLGEDAVDIFSQFK 503
+DA VF M ERD+ + W MI G +NG A+++F +
Sbjct: 182 EDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQ 241
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTG 561
+ + P++ + V SACS LG + G M K + H+V ++++M G
Sbjct: 242 REDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHR---IELNHFVGGALINMYSRCG 298
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+DEA E+M E +V + ++ +HG
Sbjct: 299 DIDEAQRVFEQMK-EKNVITYNSMIMGFALHG 329
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 223/391 (57%), Gaps = 14/391 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ +E D + + ++ ACGD AL K +H ++ER + N ++
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C ++ A VF NM RD+ SW MI+ + +G G DAV +FS+ + +GL PD
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ +ACS G + EG F+ M+ Y I P ++H +VD+LG G + EA FI+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVP-- 623
M MEP+ VW L+ CR+H + ++G A+ + QL P + N +KAG
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
N + K K KK + +EV +H + GD SHP++D+IY + L +MKE GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP-----ARAPIRIMKNLRVCGDCHS 738
P++ LHD+++E KE L HSE+LA+ L+++ + IRI KNLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
A K+IS+I RE+IIRD RFH F+ G+CSC
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G E ++V G + + D TF +++AC + + + +H ++ +
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
NG++ MY +C + +A V M+ RD+ SW++++ G+A+N +DA+++ + +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGY 562
+ D + A S E +++ + M G K VS M+G
Sbjct: 236 KISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMG----KKSLVSWNVMIGVYMKNAM 289
Query: 563 LDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE--QLDPSRLNEKS 617
EA+E +M EPD ++ C L LG + +E +L P+ L E +
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI--LKMYSECDSMDDAFSVFSN 470
Q++ D + L + VH + +L LR ++ G+ ++ Y+ + A VF
Sbjct: 45 LGQVLDTYPDIRTL---RTVHSRI--ILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ ER++ + MI + NG + V +F ++PD F V ACS G +V G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
S +K G+ ++ +V M G G+L EA +++M DV W L+
Sbjct: 160 RKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLV 213
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 230/391 (58%), Gaps = 17/391 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+++ G + +++D +FS + A + LEE + +H V +L + N
Sbjct: 684 EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAA 743
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C M D + R SW+ +I+ FA++G + A + F + + G KPD
Sbjct: 744 MDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDH 803
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ + SAC+ G V EG+ +++SM++++G+ P ++H V I+D+LG +G L A FI+
Sbjct: 804 VTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIK 863
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK 631
+MP+ P+ W L+ CR+HGNLEL + AE + +LDPS A ++ N +
Sbjct: 864 EMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPS----DDSAYVLYSNVCATSG 919
Query: 632 EKEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+ E+ K++ S N+ ++++ KVH + G+ HP+ +I A + L K
Sbjct: 920 KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 979
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGY+P+T F LHD+D+E KE L HSERLA++ GL+++P + +RI KNLRVCGDCHS
Sbjct: 980 EAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHS 1039
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
K +S IVGR++++RD RFHHF G CSC
Sbjct: 1040 VYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L+ + +H V +L V N +L +YSE +DA VF MTERDL SW++M+
Sbjct: 414 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG----MLHFESMSKDY 541
+ ++G D + I ++ Q G + F +ACS ++E L + D+
Sbjct: 474 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
IV + ++V M G G + EA + ++ MP +PD W L+
Sbjct: 534 LIVGN-----ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 572
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MYS+ +++ A VF M R+ SW TM++G+ + GL E+AV +F Q G++
Sbjct: 133 NTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVE 192
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ + + +ACS G + + GI+ + ++V GS G + A +
Sbjct: 193 PNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 252
Query: 569 FIEKMPMEPDVDVWEKLM 586
E+MP + +V W LM
Sbjct: 253 LFEEMP-DHNVVSWTSLM 269
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 7/204 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAK-ALEEAKAVHEHVERLLSPLRVSTY--N 449
EA++ L+ ++ I + T ++ AC L+ +H H+ +L+ Y N
Sbjct: 583 EAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHI--VLTGFESDDYVKN 640
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C ++ + +F + + +W+ M+ A +G GE+A+ IF + + G+
Sbjct: 641 SLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNL 700
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F G +A + L + EG + G + + +DM G G + + L+
Sbjct: 701 DQFSFSGGLAATANLAVLEEGQ-QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 759
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHG 593
+ + P+ W L++ HG
Sbjct: 760 LPQ-PINRSRLSWNILISAFARHG 782
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V++GK + +++L L + ++ TF+ + AC + + L E+K VH + +
Sbjct: 475 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 534
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY + M +A V M + D +W+ +I G A+N +AV + ++
Sbjct: 535 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 594
Query: 506 GLKPDDQIFIGVFSACSALGDVVE 529
G+ + + V ACSA D+++
Sbjct: 595 GIPANYITMVSVLGACSAPDDLLK 618
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G G E + V + ++ +S + TF+ + +CG + V H+ +
Sbjct: 271 GYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED 330
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS N ++ M+S S+++A VF +M E D+ SW+ MI+ +A +GL +++ F +
Sbjct: 331 SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 390
Query: 504 Q 504
Sbjct: 391 H 391
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 222/395 (56%), Gaps = 16/395 (4%)
Query: 393 EAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A E L L + + P TF ++ AC AL ++H ++ +
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MYS+C S+ + VF M ++ L SW M+ G+ +G G +A+ I K + P
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D+ +F + SACS G VVEG F M K+Y + P++ HY +VD+LG G+LDEA
Sbjct: 464 DNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVI 523
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE- 628
I M ++P D+W L+ R+H N++L + A+ V ++P ++ S L + A+E
Sbjct: 524 IRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVS--SYICLSNIYAAEK 581
Query: 629 ----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+ + K KK + +E+ + VH + GD SH +T+ IYA + L+ Q+K
Sbjct: 582 RWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLK 641
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
EAGY P+T V +D+++E KE+ L HSERLA++ L+++ IRI KNLRVCGDCH+
Sbjct: 642 EAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHT 701
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+IS++ GRE+I+RD RFHHF G CSC DYW
Sbjct: 702 VTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 21/256 (8%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D AE +S N + G K A V L+ K + D T L+ AC D
Sbjct: 220 DRMAERDLTSWNT----MISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADL 275
Query: 424 KALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
KA++E K +H + R + N +++MY C+ M DA +F + +D SW++M
Sbjct: 276 KAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSM 335
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDY 541
I G+A+NG +++ +F + G PD FI V AC + + GM +H + K +
Sbjct: 336 ILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGF 395
Query: 542 ---GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
IV + ++VDM G L + ++MP + V W ++ +HG
Sbjct: 396 DANTIVGT-----ALVDMYSKCGSLACSRRVFDEMPDKSLVS-WSAMVAGYGLHG----- 444
Query: 599 DRCAEIVEQLDPSRLN 614
R E + LD + N
Sbjct: 445 -RGREAISILDGMKAN 459
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
T+ +++ACGD +E + VH V ++ L Y N +L MY++ M A VF
Sbjct: 163 TYPFVLKACGDLLLVEIGRRVHSEV--VVCGLESDIYVGNSLLAMYAKFGDMGTARMVFD 220
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M ERDLTSW+TMI+G+AKN A +F +AGL D +G+ SAC+ L V E
Sbjct: 221 RMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKE 280
Query: 530 G 530
G
Sbjct: 281 G 281
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTE 473
L+Q+ + K+ ++ + +H H+ S L +TY + Y+ C M A +F +
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISF-SILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
++ W+ MI G+A NGL ++ ++ + G + D+ + V AC L
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 223/372 (59%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC ALE + +H+++ ++ V ++ MY++C S++DA VF +M
Sbjct: 241 TLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W M+ +A +G G +A+ +F + K+ G+KPDD F+GV ACS G V EG+
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SM ++YGIV +KHY + D+L +G L+ A +FI+++P++P +W L++ C
Sbjct: 361 QYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN---------ASELAKEKENKKLASQN 642
HG++++G R E + +LD S + + N +L EK K+ +
Sbjct: 420 HGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCS 479
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH-DIDQEGKEEA 701
+E+ + VHE+ AGD SHP + + ++ + Q+K GY+P T V H ++ +E K +
Sbjct: 480 SIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+S GLL++ +RI+KNLRVC DCHS K++S + R +I+RD RFHH
Sbjct: 540 LRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHH 599
Query: 762 FKDGLCSCRDYW 773
F+DG+CSC DYW
Sbjct: 600 FEDGVCSCGDYW 611
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
++ D TF L++AC A+A EE + H + + ++ MY+EC + A
Sbjct: 134 VAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAAR 193
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M + S++ MIT ++ L +A+ +F + + GLKP I V SAC+ LG
Sbjct: 194 VMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLG 253
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G + + K + +K +++DM G L++A+ + M D W +
Sbjct: 254 ALELGRWIHDYIRK-MRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVM 311
Query: 586 MNLCRMHG 593
M HG
Sbjct: 312 MVAYANHG 319
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 224/375 (59%), Gaps = 17/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + A + +++ K VH + N ++ +Y +C S++DA +FS M
Sbjct: 550 TFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEM 609
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ R+ SW+T+IT +++G G +A+D+F Q KQ GLKP+D FIGV +ACS +G V EG+
Sbjct: 610 SLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL 669
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SMS YG+ P HY +VD+LG G LD A F+++MP+ + +W L++ C++
Sbjct: 670 SYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKV 729
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-------------SELAKEKENKKL 638
H N+E+G+ A+ + +L+P S + ++ NA ++ K++ +K
Sbjct: 730 HKNIEIGELAAKHLLELEP----HDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
++ +EV++ VH + GD HP +D+IY + L ++ + GY E + H+ +QE K
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQK 845
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+ HSE+LAV+ GL++ P P+R++KNLRVC DCHS +K S++ RE+++RD R
Sbjct: 846 DPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYR 905
Query: 759 FHHFKDGLCSCRDYW 773
FHHF G CSC DYW
Sbjct: 906 FHHFNSGSCSCGDYW 920
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ +EA+ ++ + D + AC KA+ + +H V
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S +N ++ +Y+ C ++AFS+F + +D +W+ +I+GF ++ L E A+ +F
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ QAG K + FI SA + L D+ +G +H ++ + + + +++ + G
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--ALISLYGK 595
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +++A +M + +V W ++ C HG
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ L G + G KEA + + + S ++ AC K + + +H V +
Sbjct: 113 VAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYK 172
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
N ++ +Y S A VF +M D +++T+I+G A+ G GE A+ I
Sbjct: 173 QAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQI 232
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F + + +GL+PD + +AC+++GD+ +G
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKG 264
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+++ ++ + D T + L+ AC L++ K +H ++ + T +L
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y +C ++ A +F+ ++ W+ M+ + + + +IF Q + G+ P+
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIE 571
+ + C+ G + G S+S G M YVS ++DM LD+A + +E
Sbjct: 349 YPCILRTCTCTGQIELGE-QIHSLSIKNGFESDM--YVSGVLIDMYSKYRCLDKARKILE 405
Query: 572 KMPMEPDVDVWEKLM 586
M + DV W ++
Sbjct: 406 -MLEKRDVVSWTSMI 419
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 385 LVKEGKVKE---AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
LV G++ + + E+ G ++ I + T+ +++ C +E + +H +
Sbjct: 318 LVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S + VS ++ MYS+ +D A + + +RD+ SW +MI G+ ++ E+A+ F
Sbjct: 378 ESDMYVS--GVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+ PD+ SAC+ + + +G L + G + + ++V++
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQG-LQIHARVYVSGYAADISIWNTLVNLYAR 494
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +EA ++ + ++ W L++
Sbjct: 495 CGRSEEAFSLFREIDHKDEI-TWNGLIS 521
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y++ + A VF ++ RD SW M++G+A+ GLG++A ++SQ +
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 509 PDDQIFIGVFSACS 522
P + V SAC+
Sbjct: 142 PTPYVLSSVLSACT 155
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 223/372 (59%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC ALE + +H+++ ++ V ++ MY++C S++DA VF +M
Sbjct: 241 TLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W M+ +A +G G +A+ +F + K+ G+KPDD F+GV ACS G V EG+
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SM ++YGIV +KHY + D+L +G L+ A +FI+++P++P +W L++ C
Sbjct: 361 QYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN---------ASELAKEKENKKLASQN 642
HG++++G R E + +LD S + + N +L EK K+ +
Sbjct: 420 HGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCS 479
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH-DIDQEGKEEA 701
+E+ + VHE+ AGD SHP + + ++ + Q+K GY+P T V H ++ +E K +
Sbjct: 480 SIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+S GLL++ +RI+KNLRVC DCHS K++S + R +I+RD RFHH
Sbjct: 540 LRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHH 599
Query: 762 FKDGLCSCRDYW 773
F+DG+CSC DYW
Sbjct: 600 FEDGVCSCGDYW 611
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
++ D TF L++AC A+A EE + H + + ++ MY+EC + A
Sbjct: 134 VAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAAR 193
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F M + S++ MIT ++ L +A+ +F + + GLKP I V SAC+ LG
Sbjct: 194 VMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLG 253
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G + + K + +K +++DM G L++A+ + M D W +
Sbjct: 254 ALELGRWIHDYIRK-MRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVM 311
Query: 586 MNLCRMHG 593
M HG
Sbjct: 312 MVAYANHG 319
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 237/406 (58%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ + KE + + ++ I D T ++ AC ALE + + ++++
Sbjct: 323 MIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDK-- 380
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ +++ ++ N ++ MY C +++ A +F+ M RD SW +I G A NG GE+A+D+
Sbjct: 381 NEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDM 440
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FSQ +A + PD+ IGV AC+ G V +G F M+ +GI P++ HY +VD+LG
Sbjct: 441 FSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLG 500
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+L EA E I+ MP++P+ VW L+ CR+H + E+ + A+ + +L+P N
Sbjct: 501 RAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPE--NGAVY 558
Query: 619 AGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A+ +L ++ KK +L+E+ VHE+ AGD HP++ +IY
Sbjct: 559 VLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIY 618
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + + +K AGY P+T V DI +E KE A+ HSE+LA++ GL+SS IRI+
Sbjct: 619 SKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIV 678
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+C DCH K++SK+ RE+I+RD RFHHF+ G CSC+DYW
Sbjct: 679 KNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL- 439
+ G + + E++++ +E+ + T ++ AC K L K VH +V+ L
Sbjct: 191 MISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLK 250
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA---KNGLGEDAV 496
+ P+RV N ++ MY+ C MD A +F NM RD+ SW ++TGF + GL +
Sbjct: 251 IEPVRVLE-NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYF 309
Query: 497 D----------------------------IFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
D +F + + A +KPD+ + + +AC+ LG +
Sbjct: 310 DKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALE 369
Query: 529 EGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMP 574
G + K+ + S +V +++DM + G +++A+ MP
Sbjct: 370 LGEWIKAYIDKNEIKIDS---FVGNALIDMYFNCGNVEKAIRIFNAMP 414
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 18/256 (7%)
Query: 344 SGNIQNGMMASQVLN-NCKHEDDFAEASRSS-----------QNNGTLEQLDGLVKEGKV 391
+G I N ++ +Q++ CKHE E +R NN + G + G
Sbjct: 45 TGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNN----MIKGYSRVGCP 100
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
A+ + + ++ + D T+ L++ A++ + +H+H+ +L V N +
Sbjct: 101 NSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNAL 160
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +YS + A VF ++ D+ +W+ MI+G+ ++ ++++ +F + ++ + P
Sbjct: 161 IHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSS 220
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ V SACS L D+ G KD I P +++DM + G +D AL +
Sbjct: 221 ITLVSVLSACSKLKDLNVGK-RVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFD 279
Query: 572 KMPMEPDVDVWEKLMN 587
M DV W ++
Sbjct: 280 NMKSR-DVISWTAIVT 294
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 253/462 (54%), Gaps = 31/462 (6%)
Query: 328 RRQYQQNPNEGQ--YQSYS--GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
+ YQ P+ G SYS GN + + ++++ H+D A ++ L
Sbjct: 428 KTNYQHAPSVGTALLASYSKLGNTEEALSIFKMID---HKDVVAWSA----------MLS 474
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHVERLLSP 442
+ G A V + Q + + T S + AC A +++ + H +
Sbjct: 475 CYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQ 534
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ + ++ MY+ S+D A VF T+RDL SW++MI+G+A++G ++A+D F Q
Sbjct: 535 DAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQM 594
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G++ D F+ V C+ G V EG +F+SM D+ I P+M+HY +VD+ G
Sbjct: 595 ETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGK 654
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
LDE + IE MP VW L+ CR+H N+ELG A+ + L+P + + L
Sbjct: 655 LDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPD--DSATYVLLS 712
Query: 623 PVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ A+ +L K+ KK A + +++++KVH + A D SHP +++IYA ++
Sbjct: 713 NIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLK 772
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K+ GY P T VLHDI +E KE L+ HSERLA++ GL+++P R P++I+KNLR
Sbjct: 773 AMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLR 832
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH +K++S I RE+I+RD RFHHF G CSC D+W
Sbjct: 833 VCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ A A++ + VH + V N ++ MYS+C +++A +VF M
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM 262
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+T++ G N +A+ +F + + K + V C+ L +
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR 322
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S +G +I+D G LD+A MP +V W ++ C
Sbjct: 323 -QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQ 381
Query: 592 HGNLELG 598
+ ++ L
Sbjct: 382 NADIPLA 388
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+S +++ C + K L A+ +H V + + I+ YS+C +DDAF++F M
Sbjct: 304 TYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLM 363
Query: 472 T-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+++ SW MI G +N A +FS+ ++ +KP++ + V +A ++
Sbjct: 364 PGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASI---PILLP 420
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H + + +Y PS+ +++ G +EAL I KM DV W +++
Sbjct: 421 QIHAQIIKTNYQHAPSVG--TALLASYSKLGNTEEALS-IFKMIDHKDVVAWSAMLS 474
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ MY +C ++D VF M +R++ +W +++TG+ + D + +F + +
Sbjct: 135 VGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRA 194
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ P+ F V SA ++ G V G + S +G ++ S+++M G ++
Sbjct: 195 EGVWPNPFTFTSVLSAVASQGAVDLGR-RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVE 253
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
EA +M D+ W LM
Sbjct: 254 EAKAVFRQMETR-DMVSWNTLM 274
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 239/398 (60%), Gaps = 21/398 (5%)
Query: 392 KEAIEVLGLLE-KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
KEA E+ +E ++ + + TF ++ A ++ + + +H V N
Sbjct: 409 KEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNA 468
Query: 451 ILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L MY++C S+DDA ++F S+ + D+ +W +++ G+A+ G E A+ +F +Q G++
Sbjct: 469 LLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVR 528
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ FI +AC+ G + +G M+ D+GIVP+ KH+ IVD+LG G LDEA +
Sbjct: 529 PNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEK 588
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN--- 625
+E+ + DV W L++ C+ LE G+RCAE + QLDP E + + +V +
Sbjct: 589 LLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDP----EVASSYIVLASMYA 643
Query: 626 -------ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
A+ + K +K + + + +EV ++H + AGD SHP++++IY + L
Sbjct: 644 AAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHW 703
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K AGY+ +T VLHD+ QE KE L+ HSE+LA++ GL+S+P+ +P+R++KNLRVC D
Sbjct: 704 SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSD 763
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K+ISK+ GR++++RD+ R+HHF G CSC DYW
Sbjct: 764 CHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV----STY 448
E L L E+ + P TF + AC A + A A+ + ++ LL + +
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACA-AYPPQTASAIGKRIQSLLEEAGLEGDTAVA 362
Query: 449 NGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N L MY++C S+ DA +VF + T RD +W++M+ + +GLG++A ++F +
Sbjct: 363 NATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 422
Query: 507 L-KPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
L KP+ F+ V A ++ + +G +H +S + +++ ++++M G LD
Sbjct: 423 LVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN--ALLNMYAKCGSLD 480
Query: 565 EALEFIEKMPM-EPDVDVWEKLM 586
+A +K + DV W L+
Sbjct: 481 DAQAIFDKSSSNQEDVIAWTSLV 503
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 449 NGILKMYSECDSMDDAFSVFSNM---TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MYS+C S+ DA F + ++RD+ +W+ MI+ F +NG +A+ +F
Sbjct: 46 NALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHD 105
Query: 506 GLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM----KHYV--SIVDMLG 558
G P + + F+ V +C V G+L E + +G + + +V ++VD G
Sbjct: 106 GAPPPNSVTFVSVLDSC-----VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYG 160
Query: 559 STGYLDEALE-FIEKMPMEPDVDV 581
G LD+A E F+ K EP +
Sbjct: 161 KLGSLDDAWEVFLRKSDEEPSTSL 184
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 412 TFSQLMQACGDA--KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF ++ +C +A +LE+ +A+H + ++ Y + S+DDA+ VF
Sbjct: 114 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFL 173
Query: 470 NMTERD----LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL- 524
++ + L + MI+ +NG ++++ +F G KP + V +ACS L
Sbjct: 174 RKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP 233
Query: 525 -----GDVVEGMLHFESMSKD 540
V+E + S ++D
Sbjct: 234 VGSATAFVLEQAMEVVSATRD 254
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 226/406 (55%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVE 437
L G + G V EA LGL + S P TFS L+ ACG+ +L K +H +V
Sbjct: 245 MLAGCAQNGSVDEA---LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVI 301
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
R V + ++ MY +C ++ A +F + D+ SW MI G A +G +A+
Sbjct: 302 RGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + + LKP+ F+ V +ACS G V +G +F SMS YGIVPS++H+ ++ D L
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTL 421
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL---- 613
G G L+EA FI M ++P VW L+ C++H N L + A+ + L+P +
Sbjct: 422 GRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHI 481
Query: 614 ---NEKSKAGLVPVNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIY 667
N S +G A+ L K K + + + +EV++K H + A D SHP ++I
Sbjct: 482 ILSNTYSSSGRWN-EAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERII 540
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ QM GY+P T V DI++E K L HSE+LA+ G++S+P IR+M
Sbjct: 541 DALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVM 600
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+ K ISKIVGRE+++RDA RFHHFKDG+CSC D+W
Sbjct: 601 KNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 12/242 (4%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D+ E S N L G + G+ EA+ ++ + + D T S ++ +
Sbjct: 131 DEMPEKDVVSWNTLVL----GCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEG 186
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ +H R V + ++ MY+ C D + VF N+ RD W++M+
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
G A+NG ++A+ +F + +G+KP F + AC L ++ G LH + G
Sbjct: 247 AGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG--G 304
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG----NLELG 598
++ S++DM G + A +++ PD+ W ++ +HG L L
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRI-QSPDIVSWTAMIMGHALHGPAREALVLF 363
Query: 599 DR 600
DR
Sbjct: 364 DR 365
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M E+D+ SW+T++ G A++G +A+ + + + G KPD V + D
Sbjct: 129 VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGAD 188
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V GM + G + S++DM + D +++ + +P+ D +W ++
Sbjct: 189 VRRGM-ELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSML 246
Query: 587 NLCRMHGNLE 596
C +G+++
Sbjct: 247 AGCAQNGSVD 256
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 232/405 (57%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +EG ++ + +EK+ + + T + ++ AC ALE + +H H+ R
Sbjct: 296 MIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG 355
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L N ++ MY +C ++ A +F + E+DL SW MI G+ +G G +A+ F+
Sbjct: 356 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFN 415
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +G++PD+ FI + ACS G + EG F M + I P +HY IVD+L
Sbjct: 416 EMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARA 475
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L +A +FI+ MP+EPD +W L+ CR++ +++L ++ AE V +L+P N
Sbjct: 476 GNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPE--NTGYYVL 533
Query: 621 LVPVNASELAKEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + A E K +E KKL + + +E++ KVH + GD+SHP +KI
Sbjct: 534 LANIYA-EAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 592
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L++ R +MKE G+ P+ R+ L D KE AL HSE++A++ G+LS P +R+ K
Sbjct: 593 LLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTK 652
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH K +SK+V R++I+RD+ RFHHFKDG CSCR +W
Sbjct: 653 NLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L MYS+ +++ A VF M ER + SW +MI G+A+ GL + +V +F + ++ L
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDE 565
P+ + AC++L + G +H + + S+ +V ++VDM G L
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGF----SLDRHVANALVDMYLKCGALGL 378
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A + +P E D+ W ++ MHG
Sbjct: 379 ARLLFDMIP-EKDLVSWTVMIAGYGMHG 405
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 51/178 (28%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE----------- 437
G ++ A+E++ K ++L T+ ++Q C D K++++ + +H ++
Sbjct: 82 GNLRRAMELINQSPKP--DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 438 -----------------RLLSPL---RVSTYNGILKMYSECDSMDDAFSVFSNMTE---- 473
R+ + +V +N ++ Y++ + ++ S+F M E
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 474 --------------RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
RD+ SW++MI+G+ NGL E +D+F Q G+ D + V
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 223/372 (59%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC ALE + +H+++ ++ V ++ MY++C S++DA VF +M
Sbjct: 241 TLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W M+ +A +G G +A+ +F + K+ G+KPDD F+GV ACS G V EG+
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F+SM ++YGIV +KHY + D+L +G L+ A +FI+++P++P +W L++ C
Sbjct: 361 QYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN---------ASELAKEKENKKLASQN 642
HG++++G R E + +LD S + + N +L EK K+ +
Sbjct: 420 HGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCS 479
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH-DIDQEGKEEA 701
+E+ + VHE+ AGD SHP + + ++ + Q+K GY+P T V H ++ +E K +
Sbjct: 480 SIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATS 539
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+S GLL++ +RI+KNLRVC DCHS K++S + R +I+RD RFHH
Sbjct: 540 LRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHH 599
Query: 762 FKDGLCSCRDYW 773
F+DG+CSC DYW
Sbjct: 600 FEDGVCSCGDYW 611
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA V + ++ ++ D TF L++AC A+A EE + H + + +
Sbjct: 120 EEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTL 179
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY+EC + A +F M + S++ MIT ++ L +A+ +F + + GLKP
Sbjct: 180 INMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTS 239
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
I V SAC+ LG + G + + K + +K +++DM G L++A+ +
Sbjct: 240 VTLISVLSACALLGALELGRWIHDYIRK-MRLDSLVKVNTALIDMYAKCGSLEDAIGVFQ 298
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
M D W +M HG
Sbjct: 299 DMESR-DKQAWSVMMVAYANHG 319
>gi|217073734|gb|ACJ85227.1| unknown [Medicago truncatula]
Length = 452
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 219/350 (62%), Gaps = 20/350 (5%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
++EG V + +E++G Q D F L++ C D K+LE K VHE + R
Sbjct: 78 FLQEGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ +Y +C S+ DA VF + +R++ S + MI G+ NGLG D + +F Q +Q
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDKVPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQ 193
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PD++ F V + C+ + V EG++ FESM K+YGIVP M+HY+ +V++ G G LD
Sbjct: 194 QGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGCAGRLD 252
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA EFIE MP+E V++WE L N R+HG+LE D E++ LDPS K+ A VP+
Sbjct: 253 EAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPS----KAAADKVPL 308
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+ KK ++ N+LE +++V EYR E D +RGL QM+EAGY+P
Sbjct: 309 --------PQRKKQSAINMLEEKNRVSEYRCNMPYKEEGD---VKLRGLTGQMREAGYVP 357
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+TR+VLHDID+E KE+AL HSERLA+++GL+S+P R +RI+KNLR+CG
Sbjct: 358 DTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICG 407
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 216/371 (58%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC LE + VH+++ R VS N ++ M+S+C +D A +F +M
Sbjct: 284 TILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM 343
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ +DL SW++M+ G A +GLG +A+ F + L+PD+ FIGV +ACS G V EG
Sbjct: 344 SYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGK 403
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F + YG+ +HY +VD+L G L EA EFI MP++PD +W ++ CR+
Sbjct: 404 KLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRV 463
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
+ NLELG+ A + +L+P S + + K EL EK +K +
Sbjct: 464 YNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCS 523
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+ + + H + AGD SHPE +I ++R +R ++K GY+ +T VL +ID KEE++
Sbjct: 524 SVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESV 583
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA+ +GLL S I I+KNLRVC DCH+ +K++SKI R++ +RD RFHHF
Sbjct: 584 SQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHF 643
Query: 763 KDGLCSCRDYW 773
KDG CSCRDYW
Sbjct: 644 KDGSCSCRDYW 654
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G +K EA+ + +E+ S D T + L+ AC + K L +H H+ +
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++C + A VF ++++D+ +W +I G+ KN +A+ +F
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 501 QFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVD 555
+ + ++P++ + V SAC+ LGD+ G DY H V S++D
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETG-----RWVHDYITRTQKGHSVSLNNSLID 325
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G +D A + M + D+ W ++N +HG
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHG 362
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF L++ C + K +H V + + + +L MY+ C + A +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M R+ W +MI+G+ KN +A+ ++ + ++ G PD+ + SAC+ L D+
Sbjct: 138 ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
GM LH D I + ++V+M G L A + +++ + DV W L+
Sbjct: 198 VGMKLHSHIREMDMKICAVLGS--ALVNMYAKCGDLKTARQVFDQLS-DKDVYAWSALI 253
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 231/400 (57%), Gaps = 20/400 (5%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G KEA+ + ++ + + D TFS + G + + + K H VS
Sbjct: 716 QAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVS 775
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
G++K+Y++C +D+A S+F + + + +I A++G E+AV +F + +Q G
Sbjct: 776 VATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++PD + + SAC G V EG F +M + +GI P+++HY VD+LG G L+ A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+ I KMP E + VW L+ C++ G+ ELG+RCA+ + +LDP S A +V N
Sbjct: 896 EQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP----HNSAAHVVLSNI 951
Query: 627 -SELAKEK----ENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
K K + KKL QN+ LE+ +VHE+ AGD SHP+TD+IY ++ L
Sbjct: 952 YCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKL 1011
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
M+ AGY + D + E KE+AL HSER+A++ GL+++P ++I+KNLRVC
Sbjct: 1012 ELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVC 1068
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K IS I+GRE+I+RD+ RFHHF +G CSC+D W
Sbjct: 1069 GDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + + C D+ L K +H V + ++ N +L MYS C +A S F M
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RDL SW+ M +A+ GL ++AV +F + G+KPD F + V +G
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGK 759
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
L F ++ + G+ + +V + G LDEA+
Sbjct: 760 L-FHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISL 796
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ DL ++ L+Q+C D+ L + K HE + + N ++ MY C S+++A +
Sbjct: 22 AADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHA 81
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACS--- 522
+FS M ER++ SW +I+ A++G A +F + ++ P+ + + +AC+
Sbjct: 82 IFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141
Query: 523 --ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
A+G + M+ + ++ + + ++++M G ++A+ +P E DV
Sbjct: 142 DLAIGRSIHAMIWELGLERESTTATLVGN--AMINMYAKCGSPEDAIAVFLTIP-EKDVV 198
Query: 581 VWEKL 585
W +
Sbjct: 199 SWTAM 203
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL----LSPLRVSTYNGILKMYSECDSMDDAFSV 467
T ++ AC +++ L +++H + L S N ++ MY++C S +DA +V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188
Query: 468 FSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-- 524
F + E+D+ SW M +A+ DA+ IF + L P+ FI AC++L
Sbjct: 189 FLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV--W 582
G + +LH + D P + ++++M G G + A + M ++D+ W
Sbjct: 249 GTWLHSLLHEAGLGFD----PLAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSW 302
Query: 583 EKLMN 587
+++
Sbjct: 303 NAMIS 307
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERL---LSPLRVSTYNGILKMYSECDSMDDAFSV 467
P + A G +L + +H + PL N ++ MY +C + A+ V
Sbjct: 231 PNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPL---AGNALINMYGKCGDWEGAYGV 287
Query: 468 FSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
F M R DL SW+ MI+ + G DA+ IF + + G++P+ I + +A +A
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G F + G + + +I+ M G+ A ++ + DV W
Sbjct: 348 GVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNT 407
Query: 585 LM 586
++
Sbjct: 408 ML 409
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+F ++ AC +++AL+ + +H + R + S ++ MY +C S+ +A VF
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498
Query: 471 MT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
M R L +W+ M+ +A+N ++A + Q G+ PD F V S+C
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 37/150 (24%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGED------AVD 497
V N I+ MY++C A++VF + + D+ SW+TM+ G ED V+
Sbjct: 370 VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTML------GASEDRKSFGKVVN 423
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG------IVPSMKHYV 551
F AG+ P+ FI + +ACS S + D+G I+ + YV
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACS------------NSEALDFGRKIHSLILTRRRDYV 471
Query: 552 S------IVDMLGSTGYLDEALEFIEKMPM 575
+V M G G + EA ++MP+
Sbjct: 472 ESSVATMLVSMYGKCGSIAEAELVFKEMPL 501
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ M+ C ++ A SVF M D+ SW M++ A+N ++ +F + + G+
Sbjct: 576 TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVI 635
Query: 509 PDDQIFIGVFSAC-----SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
PD C LG ++ + + D + ++ ++M + G
Sbjct: 636 PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENAL------LNMYSNCGDW 689
Query: 564 DEALEFIEKM 573
EAL F E M
Sbjct: 690 REALSFFETM 699
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 261/464 (56%), Gaps = 23/464 (4%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQ-NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
D++RR + + ++ YS NI G + S + K + F E S + T +
Sbjct: 169 DEARRVFDWSLDQ---DLYSWNIMIGGYVGSGEIGRAK--EMFDEMSERDVVSWT-TIIA 222
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ G KEA+++ + + + T + + AC + AL++ + +H ++++ +
Sbjct: 223 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKM 282
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+L MY++C +D A VF + + + W+ MI G+A +G ++A+D+F Q
Sbjct: 283 NERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ 342
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K + P+ F+ + +ACS V EG +F+SM+ YGI P ++HY +VD+LG +G
Sbjct: 343 MKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSG 402
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EA E + MPM PD +W L+ CR+H ++E G R +I+++LD + N
Sbjct: 403 LLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLAN 462
Query: 615 EKSKAGLVPVNASELAKEKE----NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S +G + ++ ++K KK + +E+ H++ GD SHP+T ++Y +
Sbjct: 463 LYSASG--QWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFL 520
Query: 671 RGLRAQMKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ ++K AGY+PE VL DI D+E KE AL HSE+LA++ GL+++P IRI+KN
Sbjct: 521 DEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKN 580
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A K ISK+ RE+I+RD R+HHFKDG CSC+DYW
Sbjct: 581 LRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 36/255 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + +ACG+ + E + + H ++ + N +++MY+ +D+A VF
Sbjct: 119 TFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWS 178
Query: 472 TERDLTSWD-------------------------------TMITGFAKNGLGEDAVDIFS 500
++DL SW+ T+I G+ + G ++A+D+F
Sbjct: 179 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFH 238
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ Q G P++ +AC+ L + +G + K I + + S++DM
Sbjct: 239 EMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKS-EIKMNERLLASLLDMYAKC 297
Query: 561 GYLDEALE-FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G +D A + F ++ ++ V W ++ MHG ++ EQ+ +++
Sbjct: 298 GEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGK---SKEAIDLFEQMKVEKVSPNKVT 354
Query: 620 GLVPVNASELAKEKE 634
+ +NA K E
Sbjct: 355 FVALLNACSHGKLVE 369
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 209/340 (61%), Gaps = 13/340 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ N ++ ++C +D A +VF M ER + SW ++I A G G++AV +F + K
Sbjct: 274 VTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKA 333
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ PDD FIGV +ACS G V EG +F+SM +YGI P ++HY +VDM G G ++
Sbjct: 334 VGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVE 393
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
+ LEF+ MPM+P+ +W L+ CR HG LELG+ + P+ +E + L V
Sbjct: 394 QGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPA--HEANYVMLSNV 451
Query: 625 NA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A SE+ +E KK+ +L+E+ +VHE+ AGD SHP+ +IY ++ +
Sbjct: 452 YALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEM 511
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+++ G+I T VL D+D+E KE AL HSE+LA++ LL +P +R++KNLRVC
Sbjct: 512 SRELRRIGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVC 571
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K IS++ RE+++RD RFH FKDG CSC+D+W
Sbjct: 572 SDCHAAIKCISQVYNREIVVRDRSRFHRFKDGSCSCKDFW 611
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 230/403 (57%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G GK EA+ + + + T L+ AC AL++ +H ++
Sbjct: 269 MINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNR 328
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C + A VF+ M +D+ +W+T+I G A +G ++A +F
Sbjct: 329 IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFK 388
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K+AG++P+D F+ + SACS G V EG + MS YGI P ++HY ++D+L
Sbjct: 389 EMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARA 448
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G+L+EA+E I MPMEP+ L+ CR+HGN ELG+ + + L P S
Sbjct: 449 GFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLS 508
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ +K L K K+ +++E++ VH + AGD SHPE++KIY +
Sbjct: 509 NIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLN 568
Query: 672 GLRAQMKEA-GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++K A GY +T VL D+++E KE AL HSE+LA+++GLL ++ IRI+KNL
Sbjct: 569 EIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNL 628
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH +K+ISK+ GRE+I+RD RFHHF+DG CSC D+W
Sbjct: 629 RVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
S L+ + K L AK + L S V ++N ++ Y + M A VF M
Sbjct: 203 IVSSLIHLYANGKDLGAAKQLFN----LCSARDVVSWNAMIDGYVKHVEMGHARMVFDRM 258
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+TMI G+A G +A+ +F Q + G+KP + + + SAC+ LG + +G
Sbjct: 259 VCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG- 317
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
LH + D I + ++VDM G + A + M + DV W ++ +
Sbjct: 318 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAI 376
Query: 592 HGNLE 596
HGN++
Sbjct: 377 HGNVK 381
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 222/373 (59%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS +++AC + +++ A +H +E+ N ++ Y++C + DA VF ++
Sbjct: 453 TFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI 512
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E D+ SW+++I+ +A +G +A+++F + ++ +K +D F+ + S C + G V +G+
Sbjct: 513 VECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGL 572
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F SM D+ I PSM+HY IV +LG G L +AL+FI +P P VW L++ C +
Sbjct: 573 WLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVV 632
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLAS 640
H N+ LG AE V ++P +E + L + A+ E+A +++ KK A
Sbjct: 633 HKNVALGRYAAEKVLDIEPH--DETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAG 690
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E++ +VH + G HP+ I A++ L + GY+P+ VLHD+D+E K
Sbjct: 691 LSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKAR 750
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSERLA+++GL +P PIRIMKNLR C DCH+ K+ISKIV RE+I+RD RFH
Sbjct: 751 MLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFH 810
Query: 761 HFKDGLCSCRDYW 773
HF++G+CSC DYW
Sbjct: 811 HFEEGICSCGDYW 823
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++QAC + LE + +H +L + N ++ MY++C +M+++ +FS++
Sbjct: 352 SLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSL 411
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV---- 527
+ + SW+T+I G+ ++G EDA+ +F + + A + F V AC+ +
Sbjct: 412 QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAV 471
Query: 528 -VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ ++ + + D + S+ +D G++ +AL+ E + +E DV W ++
Sbjct: 472 QIHSLIEKSTFNNDTIVCNSL------IDTYAKCGFIRDALKVFESI-VECDVVSWNSII 524
Query: 587 NLCRMHGN----LELGDR 600
+ +HG LEL DR
Sbjct: 525 SAYALHGRATNALELFDR 542
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ +EA+E+ L+++ V+ + +++ A A +H +L
Sbjct: 120 MQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGH 179
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ YS C ++ A VF + +D +W M++ +++N + E A++ FS+
Sbjct: 180 DRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSK 239
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G KP+ + A L + G +H S+ Y P + +++DM
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGG--ALLDMYAKC 297
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +++A E +P + DV +W L++
Sbjct: 298 GDIEDAHAIFEMIPHD-DVILWSFLIS 323
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF-----SQLMQAC---GD 422
RS T Q++GL+ A E L L+ + S+ LP ++ +Q C GD
Sbjct: 3 RSRSLLPTFSQINGLLSRNL--AANEALQWLDDELASLALPKLDSYACARFLQRCIARGD 60
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
A+A +AVH V + ++ T+ N +L Y++ + A +F M ER+ S+
Sbjct: 61 ARA---GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFV 117
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAG 506
T++ G+A G E+A+++F + ++ G
Sbjct: 118 TLMQGYALRGEFEEALELFRRLQREG 143
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 42/73 (57%)
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
+L MY++C ++DA ++F + D+ W +I+ +A++ E A ++F + ++ + P
Sbjct: 289 ALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP 348
Query: 510 DDQIFIGVFSACS 522
++ GV AC+
Sbjct: 349 NEFSLSGVLQACA 361
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 234/404 (57%), Gaps = 11/404 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK + +A+EV + + + ++ + + AC A AL + VH VE+
Sbjct: 202 MMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSG 261
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ MY +C +++A+ VF + + LT+W+ MI GFA +G GEDA+ +
Sbjct: 262 IQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKL 321
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + ++ G+ PDD + V +AC+ G + EG +F + + YGI P M+HY +VD+ G
Sbjct: 322 FGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYG 381
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G L+EA + I+ MPMEPDV V L ++HG+++LG+ V +LDP
Sbjct: 382 RAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVL 441
Query: 613 -LNEKSKAGLVP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG L E+ K A ++++EV+ +V E++ G HP +++YA+
Sbjct: 442 LANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAM 501
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
R + +++ GY+P+TR VLH I +E KE LL HSE+LA++ GLL + +RI KN
Sbjct: 502 ARDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKN 561
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A K +S++ R++++RD RFHHFKDG CSC+DYW
Sbjct: 562 LRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ G+LK+ DDA +F M ER+L SW+ M++G+ K DA+++F + +
Sbjct: 170 TMVGGLLKL----GLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRAR 225
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+ + + AC+ G + G + GI K ++VDM G ++E
Sbjct: 226 GVDGNVFVAATAVVACTGAGALARGR-EVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEE 284
Query: 566 ALEFIEKMPMEPD-VDVWEKLMNLCRMHGNLE 596
A E +P+ + W ++ +HG E
Sbjct: 285 AWRVFEALPLAAKGLTTWNCMIGGFAVHGRGE 316
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 229/405 (56%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE---EAKAVHEHVE 437
+ G G +EAIE+ + K + D + +C ALE AK + + E
Sbjct: 277 MIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEE 336
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L +P+ ++ ++ Y++C SM++A V+ M E+D ++ +I+G A G A
Sbjct: 337 FLSNPVLGTS---LIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFG 393
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F Q + G+ P++ F+G+ C+ G V +G +F SMS D+ + P+++HY +VD+L
Sbjct: 394 VFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLL 453
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------- 610
G+LDEA I+ MPM+ +V VW L+ CR+H +L + + + +L+P
Sbjct: 454 ARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYV 513
Query: 611 --SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S + S+ EK +KL + +EV VHE+ GDTSHP + KIY
Sbjct: 514 LLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYE 573
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +KEAGY P T FVL D+++E KE L HSE+LAV+ L+S+ A+ IR++K
Sbjct: 574 KLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVK 633
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH A+K ISK+ GRE++IRD RFH F DG CSCRDYW
Sbjct: 634 NLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 115/221 (52%), Gaps = 14/221 (6%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G ++ GK +EA+++ GLLE + D ++++AC LE + + +
Sbjct: 176 MICGCIEFGKFREAVDLFRGLLESG-LRPDGFVIVRVLRACARLGDLESGRWIDRCMREC 234
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V ++ MY++C SM++A VF M E+D+ W MI G+A NGL +A+++F
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ ++ ++PD +G S+C++LG + +G++++E + P + S++
Sbjct: 295 FEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSN----PVLG--TSLI 348
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
D G ++EAL + KM E D V+ +++ M+G +
Sbjct: 349 DFYAKCGSMEEALG-VYKMMKEKDRVVFNAVISGLAMYGQV 388
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G+V + + A+ + + K I D TFS +++AC +H V +
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ YS+C + DA+ VF +M +++ SW MI G + G +AVD+F
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++GL+PD + + V AC+ LGD+ G + ++ G+ ++ S+VDM
Sbjct: 195 GLLESGLRPDGFVIVRVLRACARLGDLESGRW-IDRCMRECGLSRNVFVATSLVDMYTKC 253
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++EA F+ +E D+ W ++
Sbjct: 254 GSMEEA-RFVFDGMVEKDIVCWSAMI 278
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 233/399 (58%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ ++ EA + + + + +D + ++ AC ALE+ K +H ++E+ L
Sbjct: 173 VQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDS 232
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ MY +C ++ A VF+ + ++ ++SW+ MI G A +G GE A+++F + ++
Sbjct: 233 KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 292
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ V SAC+ G V EG +F+ M++ G+ P M+H+ +VD+LG G L+E
Sbjct: 293 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 352
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I +MP+ PD V L+ CR+HGN ELG++ + V +L+P N L +
Sbjct: 353 ARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPH--NSGRYVLLANLY 410
Query: 626 AS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
AS +L ++ KK +++E S V E+ AG +HP+ +IYA + +
Sbjct: 411 ASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEIL 470
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++ GY+P+T VLHDID+E KE L HSE+LA++ GLL + +RI KNLR+C
Sbjct: 471 ETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICR 530
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH A K+ISK+ RE+IIRD RFHHF+ G CSC+DYW
Sbjct: 531 DCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ L++AC A+EE K +H HV + + N ++ MY S++ A VF NM
Sbjct: 96 TYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNM 155
Query: 472 TERDL--TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+RD SW+ MI + ++ +A +F + + + D + + SAC+ LG + +
Sbjct: 156 PQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 215
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G + K GI K +++DM G L++A E ++P + + W ++
Sbjct: 216 GKWIHGYIEKS-GIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISSWNCMIGGL 273
Query: 590 RMHGNLELGDRCAEIVEQLD 609
MHG G+ E+ ++++
Sbjct: 274 AMHGK---GEAAIELFKEME 290
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 239/398 (60%), Gaps = 21/398 (5%)
Query: 392 KEAIEVLGLLE-KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
KEA E+ +E ++ + + TF ++ A ++ + + +H V N
Sbjct: 543 KEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNA 602
Query: 451 ILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L MY++C S+DDA ++F S+ + D+ +W ++I G+A+ G E A+ +F +Q G++
Sbjct: 603 LLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVR 662
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ FI +AC+ G + +G M+ D+GI+P+ KH+ IVD+LG G LDEA +
Sbjct: 663 PNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEK 722
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN--- 625
+E+ + DV W L++ C+ LE G+RCAE + QLDP E + + +V +
Sbjct: 723 LLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDP----EVASSYIVLASMYA 777
Query: 626 -------ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
A+ + K +K + + + +EV ++H + AGD SHP++++IY + L
Sbjct: 778 AAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHW 837
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K AGY+ +T VLHD+ QE KE L+ HSE+LA++ GL+S+P+ +P+R++KNLRVC D
Sbjct: 838 SIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSD 897
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A K+ISK+ GR++++RD+ R+HHF G CSC DYW
Sbjct: 898 CHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV----STY 448
E L L E+ + P TF + AC A + A A+ + ++ LL + +
Sbjct: 438 EALVLFERMLLEGVRPSVATFITALTACA-AYPPQTASAIGKRIQSLLEEAGLEGDTAVA 496
Query: 449 NGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N L MY++C S+ DA +VF ++ RD +W++M+ + +GLG++A ++F +
Sbjct: 497 NATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 556
Query: 507 L-KPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
L KP+ F+ V A ++ + +G +H +S + +++ ++++M G LD
Sbjct: 557 LVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN--ALLNMYAKCGSLD 614
Query: 565 EALEFIEKMPM-EPDVDVWEKLM 586
+A +K + DV W L+
Sbjct: 615 DAQAIFDKSSSNQEDVIAWTSLI 637
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 16/144 (11%)
Query: 449 NGILKMYSECDSMDDAFSVFSNM---TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MYS+C S+ DA F + ++RD+ +W+ MI+ F +NG +A+ +F +
Sbjct: 180 NALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRD 239
Query: 506 GLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM----KHYV--SIVDMLG 558
G P + + F+ V +C V G+L E + +G + + +V ++VD G
Sbjct: 240 GAPPPNSVTFVSVLDSC-----VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYG 294
Query: 559 STGYLDEALE-FIEKMPMEPDVDV 581
G LD+A E F+ K EP +
Sbjct: 295 KLGSLDDAWEVFLRKGDEEPSTSL 318
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN------GILKMYSECDSMDDAF 465
T+ L+QACG +AL++ + +H H+ LS R+ +N ++ M+++C ++ +A
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHI---LSR-RIDLHNHSFLASDLIVMHAKCGNLAEAE 100
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
++ + S MI + ++G + A+++F + + ++P+ I + +ACS LG
Sbjct: 101 ALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLG 155
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM--EPDVDVW 582
++ G +H + +D+ + + +++ M G L +A + +++P + DV W
Sbjct: 156 NLAAGRRIHSQISDRDFEENSVLGN--ALISMYSKCGSLIDAKQAFDRLPRASKRDVVTW 213
Query: 583 EKLMN 587
+++
Sbjct: 214 NAMIS 218
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDA--KALEEAKAVHEHVER 438
+ ++ G +EA+++ +++ + TF ++ +C +A +LE+ +A+H +
Sbjct: 217 ISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVG 276
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD----LTSWDTMITGFAKNGLGED 494
++ Y + S+DDA+ VF + + L + MI+ +NG ++
Sbjct: 277 AGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQE 336
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSAL------GDVVEGMLHFESMSKD 540
++ +F G KP + V +ACS L V+E + S ++D
Sbjct: 337 SLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRD 388
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 232/401 (57%), Gaps = 18/401 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLVK+ V EAIE +++ + + T + ++ C AL K +H + + +
Sbjct: 250 IAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA 309
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C +MD VF+ M +DLTSW+T+ITG+A NG +A++ F +
Sbjct: 310 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 369
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G PD FI + S CS G +G FE M D+GI P+++HY +VD+LG G
Sbjct: 370 MICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAG 429
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+ EALE ++ MP +P +W L+N CR+HGN+ L + A+ + +L+P+ N
Sbjct: 430 RIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSN 489
Query: 615 EKSKAGL---VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSH----PETDKIY 667
+ AG+ V V E +++ K A + L+++SK+H + AG ++ E K++
Sbjct: 490 IYANAGMWESVKV-VREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEFRNSVEYKKVW 548
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L M+E GY+P+T VLHD+ +E + + HSERLA L+++ + PIRI
Sbjct: 549 ---KRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTASGMPIRIT 605
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCS 768
KNLRVC DCHS +K +SK+ GR +++RD RFHHFKDG+CS
Sbjct: 606 KNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 2/175 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS ++AC D L +AVH V + N +L++YSE ++A +F M
Sbjct: 180 FSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMP 239
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R+L SW+++I G K +A++ F + G+ + C+ + + G
Sbjct: 240 HRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKE 299
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ K P S+VDM G +D M + D+ W L+
Sbjct: 300 IHAVIVKSTA-KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK-DLTSWNTLIT 352
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 709 LAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
LA L+++ + PIRI KNL VC DCHS +KI+SK G
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 236/410 (57%), Gaps = 23/410 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA-LEEAKAVHEHV--E 437
L G + G+ + AI++ L K + + TFS ++ C A + + K H
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKS 528
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
RL S L VS+ +L MY++ ++ A VF E+DL SW++MI+G+A++G A+D
Sbjct: 529 RLDSSLCVSS--ALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 586
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + K+ +K D FIGVF+AC+ G V EG +F+ M +D I P+ +H +VD+
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G L++A++ I+ MP +W ++ CR+H ELG AE + + P E S
Sbjct: 647 SRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIP----EDS 702
Query: 618 KAGLVPVN-------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
A ++ N +L E+ KK + +EV++K + + AGD SHP D
Sbjct: 703 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKD 762
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY + L ++K+ GY P+T +VL DID E KE L HSERLA++ GL+++P +P+
Sbjct: 763 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 822
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF-KDGLCSCRDYW 773
I+KNLRVCGDCH +K+I+KI RE+++RD+ RFHHF DG+CSC D+W
Sbjct: 823 LIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ +EA+ + ++++ + + T+S ++ A E VH V +
Sbjct: 372 MISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTN 427
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ +L Y + +D+A VFS + +D+ +W M+ G+A+ G E A+ IFS
Sbjct: 428 YERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFS 487
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KP++ F + + C+A + F + + S+ +++ M
Sbjct: 488 ELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 547
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G+++ A E + K E D+ W +++ HG
Sbjct: 548 GHIESAEE-VFKRQREKDLVSWNSMISGYAQHG 579
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+F+ +++ C + K L + +H V + + ++ YS+C +M DA +F
Sbjct: 301 SFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKET 360
Query: 472 TER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ SW MI+GF +N E+AV +FS+ K+ G++P++ + + +AL +
Sbjct: 361 GFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL---TALPVISPS 417
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + +Y ++ +++D G +DEA + + D+ W ++
Sbjct: 418 EVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAML 470
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G ++G+ +EA + ++ + +D FS +++ + +H +
Sbjct: 69 LFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGF 128
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
VS ++ Y + + D +VF M ER++ +W T+I+G+A+N L E+ + +F +
Sbjct: 129 LDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMR 188
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ G +P+ F+ +ALG + E
Sbjct: 189 MQDEGTQPNS------FTFAAALGVLAE 210
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 227/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +E +++ ++ + + ++ + +C +L+ + +H + +L
Sbjct: 381 MISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLG 440
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MYS C ++ A +VF M D SW+ MI A++G G A+ ++
Sbjct: 441 HDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYE 500
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + PD F+ + SACS G V EG +F++M YGI P HY ++D+L
Sbjct: 501 KMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRA 560
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRLNEK 616
G EA E MP EP +WE L+ C +HGN+ELG DR E++ Q D + ++
Sbjct: 561 GMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLS 620
Query: 617 SKAGLV-----PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ + +L +E+ KK + +EV + VH + D HPE +Y +
Sbjct: 621 NMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLE 680
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M++ GY+P+T+FVLHD++ E KE AL HSE+LAV +G++ P A IR+ KNLR
Sbjct: 681 QLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLR 740
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A K ISK+V RE+I+RD KRFHHF++G CSC +YW
Sbjct: 741 ICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-L 439
+ G V G +EA ++L + I +D T++ ++ A +A + VH +V R +
Sbjct: 245 MISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV 304
Query: 440 LSP---LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD---------------- 480
+ P +S N ++ +Y+ C + +A VF M +DL SW+
Sbjct: 305 VQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEAN 364
Query: 481 ---------------TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
MI+G A+NG GE+ + +F+Q K GL+P D + G ++CS LG
Sbjct: 365 SIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLG 424
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G S G S+ +++ M G ++ A MP V W +
Sbjct: 425 SLDNGQ-QLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS-WNAM 482
Query: 586 MNLCRMHGN----LELGDRCAEIVEQLDPSR------LNEKSKAGLV 622
+ HG+ ++L ++ + E + P R L+ S AGLV
Sbjct: 483 IAALAQHGHGVQAIQLYEKMLK--EDILPDRITFLTILSACSHAGLV 527
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ I+ Y D + A + MT+ +W+ MI+G+ G E+A D+ + G
Sbjct: 210 AWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLG 269
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV-----SIVDMLGST 560
++ D+ + V SA S G G +H + +V H+V +++ +
Sbjct: 270 IQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT---VVQPSGHFVLSVNNALITLYTRC 326
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G L EA +KMP++ D+ W +++ C
Sbjct: 327 GKLVEARRVFDKMPVK-DLVSWNAILSGC 354
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 451 ILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L YS ++ A +F + M+ RD S++ MIT F+ + G A+ +F Q K+ G
Sbjct: 68 MLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFV 127
Query: 509 PDDQIFIGVFSACSALGD 526
PD F V A S + D
Sbjct: 128 PDPFTFSSVLGALSLIAD 145
>gi|302771608|ref|XP_002969222.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
gi|300162698|gb|EFJ29310.1| hypothetical protein SELMODRAFT_91949 [Selaginella moellendorffii]
Length = 445
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 225/399 (56%), Gaps = 18/399 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G KEA+ + +++ + I D F+ ++ AC L + A+H + L S +ST
Sbjct: 51 GDSKEAVILFRMMDLEGIPADGVAFAAVLDACASHSTLSDGAAIHASI--LESGFAISTV 108
Query: 449 --NGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
G++ MY +C + +A ++F + ERDL W +MI +A+ G GE A++ F
Sbjct: 109 VSTGLVNMYGKCGRLREARAIFDAIAFRERDLVLWTSMIAAYAQWGRGEAAIEAFQSMLL 168
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ D+ +FI V ACS G + G +F S+ DY + + HY +D+LG G+LD
Sbjct: 169 DGIAADEVVFISVLCACSHAGLLELGCQYFASIEPDYRVAIGVHHYACAIDLLGKAGWLD 228
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA IE+MP +PD W L+ C++H + + +R +E LDP + A LV +
Sbjct: 229 EAESLIERMPFDPDGACWTALLAACKLHKDGDRAERASERAMALDPD--SAAPYALLVKI 286
Query: 625 NASELAKEKENKKLASQNL---------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
A E+ ++ + + + VR +VHE+ AG HP +IY + LRA
Sbjct: 287 QGGGEASEQTTRRRLERGVRKLVPGCSSIVVRDRVHEFTAGAMDHPRAAEIYEELERLRA 346
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+ EAGY+P+T V+ +D+ KE +LAHSE+LAV+ GLL++PA +P+R++ NLR+C D
Sbjct: 347 PLAEAGYVPDTGVVIQAVDEREKERIVLAHSEKLAVAFGLLATPANSPLRVVNNLRMCSD 406
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKD-GLCSCRDYW 773
CHSA+K I+ I RE+++RD RFH F + G CSC DYW
Sbjct: 407 CHSAMKFIASITRREIVVRDLIRFHRFDEQGRCSCGDYW 445
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 235/406 (57%), Gaps = 16/406 (3%)
Query: 382 LDGLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G + G+ EA+E+ L + + T S + AC AL + +H +V R
Sbjct: 449 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 508
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MYS+ +D A VF NM +R+ SW +++TG+ +G GE+A+ I
Sbjct: 509 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 568
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + ++ GL PD F+ V ACS G V +G+ +F M+KD+G+VP +HY +VD+L
Sbjct: 569 FYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 628
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G LDEA+E I MPM+P VW L++ CR++ N+ELG+ A + +L+ N+ S
Sbjct: 629 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESG--NDGSY 686
Query: 619 AGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A+ L K KK + ++ R + AGD SHP + +IY
Sbjct: 687 TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 746
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
L+R L ++K GY+P+ RF LHD+D E K + L HSE+LA+++G+L++ APIRI
Sbjct: 747 DLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRIT 806
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR CGDCHSA IS I+ E+I+RD+ RFHHFK+G CSCR YW
Sbjct: 807 KNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 8/207 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +++ +++ +++ D TF +++ACG+ + +VH V V
Sbjct: 102 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNV 161
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
NG++ MY C + ++A VF M ER DL SW++++ + + G A+ +F +
Sbjct: 162 FVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM 221
Query: 503 KQ-AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G++PD + V AC+++G G +H ++ G+ + ++VDM
Sbjct: 222 TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS--GLFEDVFVGNAVVDMYAKC 279
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++EA + E+M ++ DV W ++
Sbjct: 280 GMMEEANKVFERMKVK-DVVSWNAMVT 305
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 39/177 (22%)
Query: 393 EAIEVLGLLEKQC----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
++I + + E+ I D + ++ AC A K VH + R V
Sbjct: 210 DSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG 269
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT------------------------ 484
N ++ MY++C M++A VF M +D+ SW+ M+T
Sbjct: 270 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 329
Query: 485 -----------GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
G+A+ GLG +A+D+F Q + G +P+ + + S C+ G ++ G
Sbjct: 330 LNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHG 386
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 31/257 (12%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA++V + ++ T L+ C A L K H H + +
Sbjct: 339 IAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWIL 398
Query: 442 PLR-------VSTYNGILKMYSECDSMDDAFSVFSNMTERD--LTSWDTMITGFAKNGLG 492
L + N ++ MYS+C S A ++F + +D + +W +I G A++G
Sbjct: 399 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 458
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFS-ACSALGDVVEGMLHFESMSKDYGI---VPSMK 548
+A+++FSQ L+PD+ + F+ +C+ + G L F Y + S
Sbjct: 459 NEALELFSQM----LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 514
Query: 549 HYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
+V+ ++DM +G +D A + M V W LM MHG G+ +I
Sbjct: 515 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGR---GEEALQI-- 568
Query: 607 QLDPSRLNEKSKAGLVP 623
E K GLVP
Sbjct: 569 ------FYEMQKVGLVP 579
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 226/396 (57%), Gaps = 13/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+E+ ++ + + T L+ ACG+ AL KA H R V
Sbjct: 365 GRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVG 424
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY++C + + F + ++L W+ +I G+A +G ++A++IF +++G K
Sbjct: 425 SALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F V SACS G EG +F SMS YGI ++HY +V +L G L++A
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
I +MP+ PD VW L++ CR+H N+ LG+ AE + +L+PS N + L + AS
Sbjct: 545 MIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPS--NPGNYILLSNIYASK 602
Query: 628 ----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
++ K K +K + +EV++KVH AGD SHP+ +I + L +M
Sbjct: 603 GMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEM 662
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K+ GY PE FVL D++++ KE+ L HSE+LAV GLL++P P++++KNLR+CGDCH
Sbjct: 663 KKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCH 722
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K IS RE+ +RD RFHHFK+G CSC DYW
Sbjct: 723 VVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 410 LPTFSQLM---------------QACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGIL 452
L TFSQ++ +AC AL+ A+ VH +S ++ + ++
Sbjct: 99 LSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS--VSGFDSDSFVQSSLV 156
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C+ + DA VF M E D+ SW ++ +A+ G ++A +FS+ +G++P+
Sbjct: 157 HMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLI 216
Query: 513 IFIGVFSACSALGDVVEGMLHFESM 537
+ G+ + + G E +L F M
Sbjct: 217 SWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 14/229 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G G EA+ + + + D T S ++ A GD + L +H +V +
Sbjct: 221 MIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG 280
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+S VS+ ++ MY +C + VF M D+ S + I G ++NG E ++ +
Sbjct: 281 LVSDKCVSS--ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q K G++ + + + + CS G +E + F M + G+ P + V+I +L
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAGVKP---NSVTIPCLLP 394
Query: 559 STGYLDEALE------FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
+ G + + F + + DV V L+++ G ++ C
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRIC 443
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 16/169 (9%)
Query: 425 ALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
+L + + H H+ + L + ++T +L Y+ DA V + E ++ S+ T+
Sbjct: 28 SLSQTRQAHAHILKTGLFNDTHLAT--KLLSHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESM 537
I F+K A+ FSQ GL PD+++ AC+ L + V G+
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
D + S+ H M + +A ++M EPDV W L+
Sbjct: 146 DSDSFVQSSLVH------MYIKCNQIRDAHRVFDRM-FEPDVVSWSALV 187
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 213/373 (57%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + ALE + +H+ + L S + MY++C S+ +A F +
Sbjct: 317 TIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMI 376
Query: 472 TE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ ++L +W+TMIT +A +G G +AV IF +AG++PD F+G+ S CS G +
Sbjct: 377 AQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDA 436
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ HF M + + P ++HY +VD+LG G L EA E I +MPM+ VW L+ C
Sbjct: 437 GLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAAC 496
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLAS 640
R H NLE+ + A + L+P N ++AG+ L K + KK
Sbjct: 497 RSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPG 556
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ K H + D SHP+ +IY + L ++K AGYIP+T FVLHDI +E KE
Sbjct: 557 CSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEY 616
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ GLL++ +R+ KNLR+CGDCH+A K ISKI RE+I+RD RFH
Sbjct: 617 NLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFH 676
Query: 761 HFKDGLCSCRDYW 773
FKDG CSC DYW
Sbjct: 677 CFKDGSCSCGDYW 689
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
GDA+ L + V + ++++N ++ Y + + A +F M R++ SW
Sbjct: 233 GDARKLFDKMIVRD----------MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWT 282
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAG--LKPDDQIFIGVFSACS 522
MI+G+ +NG E A+ +F + Q G +KP+ + V AC+
Sbjct: 283 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACA 326
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 233/402 (57%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISV-DLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EAI+V + +V + T+ ++ A AL++ H + +
Sbjct: 415 ITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF 474
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY +C + DA S+F + + SW+ +I+ +G G AV +F
Sbjct: 475 LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFK 534
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KPD F+ + SACS G V EG F+ M + YGI PS+KHY +VD+ G
Sbjct: 535 EMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRA 594
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G+L++A F++ MP+ PDV VW L+ CR+H N+EL ++ + +++ +
Sbjct: 595 GHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLS 654
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N +K G LA+++ KK + +EV K+ + G+ +HP+ ++IY+ +R
Sbjct: 655 NIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELR 714
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L A+MK GY+P+ FVL D++ + KE L +HSERLA++ G++S+P + ++I KNLR
Sbjct: 715 NLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLR 774
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A K ISKI RE+I+RD+ RFHHFKDG+CSC DYW
Sbjct: 775 VCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G GKV EA+EV + + +S+D T S L+ C + +H + +L
Sbjct: 211 MISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLG 270
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++ + A ++F+ M RD+ SW++++ F +N A+ +++
Sbjct: 271 LEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYN 330
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV-------SI 553
+ G+ PD + + S + LG+ F S +G V ++ +I
Sbjct: 331 KMHSIGVVPDLLTLVSLASVAAELGN-------FLSSRSIHGFVTRRCWFLHDIALGNAI 383
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+DM G++D A + E +P++ DV W L+
Sbjct: 384 IDMYAKLGFIDSARKVFEGLPVK-DVISWNSLIT 416
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 7/207 (3%)
Query: 392 KEAIEVLGLLEK-QCISV--DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VST 447
K+ + LG+ K I V DL T L + ++++H V R L ++
Sbjct: 320 KKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIAL 379
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAG 506
N I+ MY++ +D A VF + +D+ SW+++ITG+++NGL +A+D++S + +G
Sbjct: 380 GNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSG 439
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
P+ ++ + +A S LG + +GM + K++ + + +VDM G G L +A
Sbjct: 440 AVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADA 498
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
L ++P + V W +++ +HG
Sbjct: 499 LSLFYEVPHQSSVS-WNAIISCHGLHG 524
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 12/250 (4%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLE------QLDGLVKEGKVKEAIEV 397
SG Q+ ++++++N D A + T + + + G A++
Sbjct: 69 SGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDC 128
Query: 398 LG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
L + D TF +++ACG+ L++ + VH V +L V + YS
Sbjct: 129 FNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYS 185
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+ A ++F NM RD+ +W+ MI+GF NG +A+++F + + + D
Sbjct: 186 RFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISS 245
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
+ C L D++ G+L + G+ + ++++M G L A +M +
Sbjct: 246 LLPICVQLDDIISGVL-IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR 304
Query: 577 PDVDVWEKLM 586
D+ W L+
Sbjct: 305 -DIVSWNSLL 313
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 231/367 (62%), Gaps = 9/367 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ AC AL+ ++VH + R +S L V +++MY +C S+ +F M +++
Sbjct: 239 VLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKN 298
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
S+ MI+G A +G G + + IF++ + GL+PDD +++GV +ACS G V EG+ F
Sbjct: 299 KLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFN 358
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M ++GI P+++HY +VD++G G +DEALE I+ MPMEP+ +W L++ ++H NL
Sbjct: 359 RMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNL 418
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---SELAKEKEN---KKLASQ---NLLEV 646
+ G+ A+ + +LD + ++ + A ++AK + N K L+ + +L+EV
Sbjct: 419 QAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEV 478
Query: 647 RSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHS 706
+ K+H + + D HP+++ +Y ++ + Q+K GY P+T VL D+D+E K++ L HS
Sbjct: 479 KRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHS 538
Query: 707 ERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
++LA+++ L+ + +PIRI++NLR+C DCH+ K+IS I RE+ +RD RFHHFKDG
Sbjct: 539 QKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGA 598
Query: 767 CSCRDYW 773
CSCRDYW
Sbjct: 599 CSCRDYW 605
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 21/255 (8%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G VK+ +EA+ + ++ + D T+ L++AC A+EE VH H+ +L
Sbjct: 103 MRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 162
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY +C + +VF M ER + SW +IT A G+ D + +
Sbjct: 163 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGD 222
Query: 502 FKQAG-LKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
G + ++ I + V SAC+ LG + V G L ++S IV + S+++
Sbjct: 223 MSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFL-LRNVSGLNVIVET-----SLIE 276
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC-AEIVEQ-LDPS-- 611
M G L + + +KM + + + +++ MHG G R E++EQ L+P
Sbjct: 277 MYLKCGSLYKGMCLFQKMAKKNKLS-YSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDI 335
Query: 612 ----RLNEKSKAGLV 622
LN S AGLV
Sbjct: 336 VYVGVLNACSHAGLV 350
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKM-YSECD 459
EK+C+S L++ C + +EE K H + +L L N + S+
Sbjct: 31 EKECVS--------LLKKCSN---MEEFKQSHARILKLGLFGDSFCASNLVATCALSDWG 79
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
SMD A S+F M E ++TM+ G K+ E+A+ + + + G+KPD+ + +
Sbjct: 80 SMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLK 139
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
AC+ L V EGM + K G+ + S++ M G G + E+M E V
Sbjct: 140 ACARLPAVEEGMQVHAHILK-LGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMN-ERSV 197
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIV 605
W L+ H +L + C ++
Sbjct: 198 ASWSALIT---AHASLGMWSDCLRLL 220
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 261/464 (56%), Gaps = 23/464 (4%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQ-NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
D++RR + + ++ YS NI G + S + K + F E S + T +
Sbjct: 84 DEARRVFDWSLDQ---DLYSWNIMIGGYVGSGEIGRAK--EMFDEMSERDVVSWT-TIIA 137
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ G KEA+++ + + + T + + AC + AL++ + +H ++++ +
Sbjct: 138 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKM 197
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+L MY++C +D A VF + + + W+ MI G+A +G ++A+D+F Q
Sbjct: 198 NERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ 257
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K + P+ F+ + +ACS V EG +F+SM+ YGI P ++HY +VD+LG +G
Sbjct: 258 MKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSG 317
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EA E + MPM PD +W L+ CR+H ++E G R +I+++LD + N
Sbjct: 318 LLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLAN 377
Query: 615 EKSKAGLVPVNASELAKEKE----NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
S +G + ++ ++K KK + +E+ H++ GD SHP+T ++Y +
Sbjct: 378 LYSASG--QWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFL 435
Query: 671 RGLRAQMKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ ++K AGY+PE VL DI D+E KE AL HSE+LA++ GL+++P IRI+KN
Sbjct: 436 DEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKN 495
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A K ISK+ RE+I+RD R+HHFKDG CSC+DYW
Sbjct: 496 LRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 36/255 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + +ACG+ + E + + H ++ + N +++MY+ +D+A VF
Sbjct: 34 TFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWS 93
Query: 472 TERDLTSWD-------------------------------TMITGFAKNGLGEDAVDIFS 500
++DL SW+ T+I G+ + G ++A+D+F
Sbjct: 94 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFH 153
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ Q G P++ +AC+ L + +G + K I + + S++DM
Sbjct: 154 EMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKS-EIKMNERLLASLLDMYAKC 212
Query: 561 GYLDEALE-FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G +D A + F ++ ++ V W ++ MHG ++ EQ+ +++
Sbjct: 213 GEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGK---SKEAIDLFEQMKVEKVSPNKVT 269
Query: 620 GLVPVNASELAKEKE 634
+ +NA K E
Sbjct: 270 FVALLNACSHGKLVE 284
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 233/399 (58%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ ++ EA + + + + +D + ++ AC ALE+ K +H ++E+ L
Sbjct: 228 VQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDS 287
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ MY +C ++ A VF+ + ++ ++SW+ MI G A +G GE A+++F + ++
Sbjct: 288 KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ V SAC+ G V EG +F+ M++ G+ P M+H+ +VD+LG G L+E
Sbjct: 348 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 407
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I +MP+ PD V L+ CR+HGN ELG++ + V +L+P N L +
Sbjct: 408 ARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPH--NSGRYVLLANLY 465
Query: 626 AS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
AS +L ++ KK +++E S V E+ AG +HP+ +IYA + +
Sbjct: 466 ASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEIL 525
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++ GY+P+T VLHDID+E KE L HSE+LA++ GLL + +RI KNLR+C
Sbjct: 526 ETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICR 585
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH A K+ISK+ RE+IIRD RFHHF+ G CSC+DYW
Sbjct: 586 DCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ L++AC A+EE K +H HV + + N ++ MY S++ A VF NM
Sbjct: 122 TYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNM 181
Query: 472 TERDLTSWDTMITGFAKNGLGE-------------------------------DAVDIFS 500
+RD+ SW ++ITG+++ G + +A +F
Sbjct: 182 PQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFD 241
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + D + + SAC+ LG + +G + K GI K +++DM
Sbjct: 242 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKC 300
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
G L++A E ++P + + W ++ MHG G+ E+ ++++
Sbjct: 301 GCLEKASEVFNELP-QKGISSWNCMIGGLAMHGK---GEAAIELFKEME 345
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 224/399 (56%), Gaps = 9/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ K +EA ++ ++ I D +FS ++ + AL + A+H+ + +L
Sbjct: 187 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 246
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ MY++C S+ DA+ VF + + ++ SW MI+ + +G +++F
Sbjct: 247 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 306
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G++P F+ V SACS G V EG+ HF SM K + + P +HY +VD+LG G+L
Sbjct: 307 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 366
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
DEA FIE MPM+P VW L+ CR +GNL++G AE + +++P +
Sbjct: 367 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 426
Query: 624 VNASELAKEKENKKLASQN---------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ L + E ++L N ++V++ + A D SH +D+IY ++ L
Sbjct: 427 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 486
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+K+ GY+ ET FV + +++ +E+ L HSE+LA++ GLL+ P +PIRI KNLR CG
Sbjct: 487 KLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCG 546
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K+ SKI RE+I+RD RFH F DG CSC DYW
Sbjct: 547 HCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 29/295 (9%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSEC 458
L EK I ++ + S ++ AC + L + VH V + L PL N ++ MY +C
Sbjct: 103 LREKTVIPNEV-SVSSVLSACANMGGLNFGRQVHGVVVKFGLVPL-TYVMNSLMDMYFKC 160
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
D+ +F + +RD+ +W+ ++ GF +N E+A + F ++ G+ PD+ F V
Sbjct: 161 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 220
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
+ ++L + +G + + K G V +M S++ M G L +A + E + + +
Sbjct: 221 HSSASLAALHQGTAIHDQIIK-LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHN 278
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN---EKSKAGLVPVNASELAKEKEN 635
V W +++ ++HG CA V +L L+ E S V V ++ +
Sbjct: 279 VISWTAMISAYQLHG-------CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 331
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPET-RFV 689
+ LA N ++ K+H+ G PE YA + L + AG++ E RF+
Sbjct: 332 EGLAHFNSMK---KIHDMNPG----PEH---YACMVDL---LGRAGWLDEAKRFI 373
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS ++ A + + +H + + + ++ MY++C M A VF M
Sbjct: 12 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 71
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
ER+L SW++MI GF N L + AV +F ++ + P++ V SAC+ +G + G
Sbjct: 72 PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 131
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ +G+VP S++DM + DE ++ + + + DV W L+
Sbjct: 132 R-QVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRDVVTWNVLV 185
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 214/376 (56%), Gaps = 19/376 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC AL K +H ++ R VS N ++ MY C ++ +F +
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 472 T-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
RD+ SW+++I+G+ +G G +AV +F + G P FI V ACS G V EG
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ FESM +YG+ P +HY +VD+LG G LDEA+E I M +EP VW L+ CR
Sbjct: 404 KMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACR 462
Query: 591 MHGNLELGDRCAEIVEQLDP-------------SRLNEKSKAGLVPVNASELAKEKENKK 637
+HG++E + + L+P +R ++ G++ EL +E +K
Sbjct: 463 IHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVL----KELLEEHALEK 518
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ + +EV+ K+H + + D +P +++ ALI AQMK GY+P+T VL+DI+ E
Sbjct: 519 VTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEE 578
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE L+ HSE+LAV+ GL+++ + IRI KNLR+C DCHS K ISK RE+++RD
Sbjct: 579 KERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVN 638
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHF+DG+CSC DYW
Sbjct: 639 RFHHFRDGVCSCGDYW 654
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQAC-----GDAKALEEAKAVHEHVERLLSPLRVST 447
EA+ L + + + VD +++ ++AC A A + VH H R L
Sbjct: 157 EALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHV 216
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQA 505
++ Y++ + A SVF+ M ER++ SW MI +AKN DA+++F A
Sbjct: 217 ATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDA 276
Query: 506 GLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
L P+ + V +AC+ + + G +LH + + + + S+ + +++ M G L+
Sbjct: 277 DLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLN--ALMAMYMRCGCLE 334
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ + DV W L++ MHG G ++ E++
Sbjct: 335 VGRHIFKWIGHRRDVVSWNSLISGYGMHG---FGPEAVQVFEEM 375
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 231/375 (61%), Gaps = 15/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFS 469
T ++ AC A++ + +H ++++ L + S ++ MY++C ++ A VF+
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+M + L+SW+ MI GFA +G D+FS+ ++ G++PDD F+G+ SACS G +
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL 420
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G F+SM++DY I P ++HY ++D+LG +G EA E I+ MPMEPD +W L+ C
Sbjct: 421 GRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKAC 480
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKE------KENKKL 638
R HGNLEL + A + +++P N S L + A+ E+AK K KK+
Sbjct: 481 RRHGNLELAESFARNLMKVEPE--NPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKV 538
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ S+VHE+ GD HP +IY ++ + A ++EAG++P+T VL ++++E K
Sbjct: 539 PGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWK 598
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K++SKI RE+I RD R
Sbjct: 599 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTR 658
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+DG+CSC D+W
Sbjct: 659 FHHFRDGVCSCNDFW 673
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G KEA+E+ + K + D T ++ AC ++++E + VH ++
Sbjct: 169 MISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG 228
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ +YS+C ++ A +F ++ +D+ SW+T+I G+ L ++A+ +F
Sbjct: 229 FGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQ 288
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM---LHFESMSKDYGIVPSMKHYVSIVDML 557
+ ++G P+D + + AC+ LG + G ++ + KD PS++ S++DM
Sbjct: 289 EMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMY 346
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
G ++ A + M + + W ++ MHG G
Sbjct: 347 AKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRANAG 386
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C +KA EE + +H HV +L + + ++ MY++ ++DA VF
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
+ RD+ S W+ MI+G+A+ G ++A+++F
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SAC A VE S D+G ++K +++D+
Sbjct: 188 EMMKTNVRPDEGTMVTVLSAC-AQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC 246
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 247 GQVETACGLFEGLSCK-DVVSWNTLI 271
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
D A SVF+ + E + W+TM+ G+A + A+ ++ GL P+ F +
Sbjct: 14 DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 519 SACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+C+ EG +H + Y P + + S++ M G L++A
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYE--PDLYVHTSLISMYAQNGRLEDA 120
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 237/400 (59%), Gaps = 15/400 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPL 443
V+ + EA+ + ++ + + T ++ AC ALE + VH++V + L S +
Sbjct: 210 VRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKIGLGSLV 269
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+VST ++ MY++C S++DA VF M +D +W MI +A +G G +A+ +F + K
Sbjct: 270 KVST--ALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAISLFEEMK 327
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ G+KPDD F+GV ACS G V EG+ +F+ M KD+GIVP +KHY + D+L +G L
Sbjct: 328 KEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDM-KDHGIVPGIKHYGCVTDLLARSGQL 386
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+ A +FI+++P+ P +W L++ C HG+ ELG R E + +LD S + +
Sbjct: 387 ERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYVIFSNLC 446
Query: 624 VN---------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
N +L EK K+ + +E+ + VHE+ AGD HP++ + ++ +
Sbjct: 447 ANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVI 506
Query: 675 AQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
Q+K GY+P T V H ++ +E K +L HSE+LA++ GLL++ A +R++KNLRVC
Sbjct: 507 DQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVC 566
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS K++S + R +I+RD RFHHF++G+CSC DYW
Sbjct: 567 PDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGICSCGDYW 606
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+ V + ++ ++ D TF L++AC A+A EE + H +L + ++
Sbjct: 117 AVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLIN 176
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY+EC A +F + S++ MI ++ +A+ +F + + GLKP
Sbjct: 177 MYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVT 236
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
I V SAC+ LG + G + + K G+ +K +++DM G L++A++ + M
Sbjct: 237 VISVLSACALLGALELGRWVHDYVRK-IGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGM 295
Query: 574 PMEPDVDVWEKLMNLCRMHG 593
+ D W ++ HG
Sbjct: 296 ESK-DRQAWSVMIVAYANHG 314
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 227/395 (57%), Gaps = 10/395 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
GK EA+ + + + T L+ AC AL++ +H ++ +
Sbjct: 368 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 427
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C + A VF+ M +D+ +W+T+I G A +G ++A +F + K+AG++
Sbjct: 428 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE 487
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+D F+ + SACS G V EG + MS YGI P ++HY ++D+L G+L+EA+E
Sbjct: 488 PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAME 547
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKA 619
I MPMEP+ L+ CR+HGN ELG+ + + L P S + +K
Sbjct: 548 LIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKK 607
Query: 620 GLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L K K+ +++E++ VH + AGD SHPE++KIY + + ++K
Sbjct: 608 WDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKS 667
Query: 680 A-GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
A GY +T VL D+++E KE AL HSE+LA+++GLL ++ IRI+KNLRVC DCH
Sbjct: 668 AIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHH 727
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K+ISK+ GRE+I+RD RFHHF+DG CSC D+W
Sbjct: 728 VIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 762
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 119/245 (48%), Gaps = 22/245 (8%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A Q+ N C D + + +DG VK ++ A V + + D+ +
Sbjct: 249 AKQLFNLCSARDVVSWNA----------MIDGYVKHVEMGHARMVF----DRMVCRDVIS 294
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSNM 471
++ ++ ++EAK + + + P R + ++N +L + +C +++DAF +FS M
Sbjct: 295 WNTMINGYAIVGKIDEAKRLFDEM-----PERNLVSWNSMLAGFVKCGNVEDAFGLFSEM 349
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW++M+ +A+ G +A+ +F Q + G+KP + + + SAC+ LG + +G
Sbjct: 350 PCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG- 408
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
LH + D I + ++VDM G + A + M + DV W ++ +
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK-DVLAWNTIIAGMAI 467
Query: 592 HGNLE 596
HGN++
Sbjct: 468 HGNVK 472
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 237/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ ++A++ + + VD T + ++ AC A LE + VH +++++
Sbjct: 607 MVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIG 666
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V + I+ MY +C S++DA+ +F+ +R++ W +MI+G A +G G +AV +F
Sbjct: 667 HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFE 726
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+ P++ F+GV +ACS G + EG +F M + YGI P +H+ +VD+ G
Sbjct: 727 LMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRA 786
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+E EFI + VW ++ CR+H N+E+G + + +L+P +
Sbjct: 787 GRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEP--FDAGPYIL 844
Query: 621 LVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ A+E L +++ KK SQ+ ++++++VH + GD SHP+ KIY+
Sbjct: 845 FSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSY 904
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++KE GY + V+ D++QE ++ L HSE+LA+++G++S+ PIR+MKN
Sbjct: 905 LDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKN 964
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+ +K S+++GRE+IIRD RFHHFK G CSC DYW
Sbjct: 965 LRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 34/265 (12%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DGL++ G + A+E+L + + + TFS + L K +H V ++
Sbjct: 491 MIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG 550
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER---------------DLTSWDTMITG 485
N ++ MY +C M+ A +F ++ + + SW +M++G
Sbjct: 551 VLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSG 610
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ +NG EDA+ FS + ++ D V SAC++ G + G + +G +
Sbjct: 611 YVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELG-------RQVHGYIQ 663
Query: 546 SMKHYV------SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+ H + SI+DM G L++A I + +V +W +++ C +HG
Sbjct: 664 KIGHGLDVFLGSSIIDMYVKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQGREAV 722
Query: 600 RCAEIV--EQLDPSRLNEKSKAGLV 622
R E++ E + P NE S G++
Sbjct: 723 RLFELMINEGITP---NEVSFVGVL 744
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y++ +++ A +F + + D+ SW +I+GFA+ GL D + +F++ + G+
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 509 PDDQIFIGVFSACSA 523
P+ V +CS+
Sbjct: 385 PNQFTLSIVLKSCSS 399
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 389 GKVKEAIEVLGLLEK---QCISVDLPTFSQLMQACG-DAKALEEAKAVHEHVERLLSPLR 444
++ + +VLGL K Q + + T S ++++C + K +H + R L
Sbjct: 363 ARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLD 422
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N IL Y +C A +F M E+D SW+ M++ + + G + +VD+F Q
Sbjct: 423 AVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL 480
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+++EA+ + + + + D T L+ A AL + +A+H +E+ L
Sbjct: 342 ITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLV 401
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V +L MY +C +++A F M+ RD+ +W MI G A NG+G+ A++ F
Sbjct: 402 ERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFW 461
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G + +I V +ACS + EG L+F+ M + I P ++HY ++D+LG +G
Sbjct: 462 MKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSG 521
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LDEA++ ++ MPM+P+ +W +++ CR+H N++L A + +L+P+ +
Sbjct: 522 LLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYN 581
Query: 622 VPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +++ + L +++ KK A + + V +VH++ GD SHP+ +I ++
Sbjct: 582 IYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEE 641
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++K AGY P T + D+D+E KE+ALLAHSE+LA++ GL+S P+ I+KNLRV
Sbjct: 642 IGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRV 701
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K+IS++ RE+I+RD RFHHF+ G+CSC D+W
Sbjct: 702 CEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 40/212 (18%)
Query: 400 LLEKQCISVDLP----TFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTY-NGILK 453
+L ++ VD+P TF L + C A + + +H R L P V + I+
Sbjct: 89 ILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIH 148
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA------------------ 495
MY+E DA F + +D+ +W T+I+G AK GL +DA
Sbjct: 149 MYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGL 208
Query: 496 -------------VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDY 541
VD F+ G+ PD+ IG+ SAC L D+ G LH + D
Sbjct: 209 ISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHM--LVGDK 266
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
++ S K V+++DM G A E + +
Sbjct: 267 RMLMSDKLVVALIDMYAKCGDTGRAREVFDAL 298
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERL 439
+ G + G+ EA++ + I+ D T ++ ACG K L ++H V +R+
Sbjct: 209 ISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRM 268
Query: 440 LSPLRVST------------------------------YNGILKMYSECDSMDDAFSVFS 469
L ++ +N ++ Y + +D A S+F
Sbjct: 269 LMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFD 328
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M + D+ +++++ITG+ G +A+ +F++ ++ GL D+ +G+ +A ++LG + +
Sbjct: 329 QMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQ 388
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G + + + + +++DM G ++EA+ ++M + DV W ++
Sbjct: 389 GRALHACIEQRL-VERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMI 443
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 219/371 (59%), Gaps = 11/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +++AC LE + VH HV + L ++ N +L MY +C S++DA +VF M
Sbjct: 166 TLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKCGSLEDANAVFVRM 223
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ SW TMI G A+NG ++A+ +F K G+KP+ +GV ACS G V EG+
Sbjct: 224 VEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGL 283
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM + +GI P +HY ++D+LG G L EA++ I +M EPD W L+N CR+
Sbjct: 284 YYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRV 343
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN------ASELAKEKENKKLASQ---N 642
H N+++ A+ + +LDP + N +E+ + N+ + + +
Sbjct: 344 HRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCS 403
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV ++H + GD SHP+ +I + L ++ GY+P+T FVL D++ E +++L
Sbjct: 404 WIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSL 463
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA+ GL+S P IRI KNLR+CGDCH K+++K+ R ++IRD R+HHF
Sbjct: 464 RYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHF 523
Query: 763 KDGLCSCRDYW 773
+DGLCSC D+W
Sbjct: 524 QDGLCSCGDFW 534
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A+E L L+ ++ + ++ T+S +++AC L + +H + ++ V + ++
Sbjct: 49 KALEFLVLMLREGVRPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALI 105
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+YS +++A VF M DL W ++I GFA+N G++A+ +F + K+AG
Sbjct: 106 DVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQT 165
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC+ L + G +H + D ++ + +++DM G L++A
Sbjct: 166 TLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNN----ALLDMYCKCGSLEDANAVFV 221
Query: 572 KMPMEPDVDVWEKLM 586
+M +E DV W ++
Sbjct: 222 RM-VEKDVISWSTMI 235
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY + + DA VF M +R++ SW TMI+ ++ L + A++ + G++
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ + V AC L ++ + LH + G+ + +++D+ G L+ AL
Sbjct: 64 PNMFTYSSVLRACDGLFNLRQ--LHCCIIK--IGLDSDVFVRSALIDVYSRWGELENALR 119
Query: 569 FIEKMPMEPDVDVWEKLM 586
++M + D+ VW ++
Sbjct: 120 VFDEM-VTGDLVVWSSII 136
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 232/396 (58%), Gaps = 12/396 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEK--QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G + K +AIEV ++++ + D+ T ++ AC AL+ K + + R
Sbjct: 166 MIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDV-TLVSVLPACAHLGALDLGKWIDGFISR 224
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L + N + MY++C + +A VF+ M ERD+ SW +I G A G ++A
Sbjct: 225 REMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGC 284
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G KP+D +F+G+ +AC+ G V +G+ F +M K+YG+ P ++HY +VD+L
Sbjct: 285 FYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLS 344
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G LD+A + I MPM+P+V +W L+ CR++ + G R + + +LD
Sbjct: 345 RAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVY 404
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQ--NLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N S G + A + +EN L + + +EV + VHE+ GD SHPE++KIY++
Sbjct: 405 LANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSM 464
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
IR L +MK AGY P+T V+H ID+E KE+AL HSE+LA++ GL+S+ IR++KN
Sbjct: 465 IRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKN 524
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
LR+C DCH A KIIS IV RE+I+RD RFHHFKDG
Sbjct: 525 LRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ +++AC + + +H V + + N ++ MY + + A +F M
Sbjct: 94 TFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEM 153
Query: 472 TERD--LTSWDTMITGFAKNGLGEDAVDIFSQFKQ-AGLKPDDQIFIGVFSACSALGDV- 527
RD + W+ MI G+A+N DA+++F +Q G+ P+D + V AC+ LG +
Sbjct: 154 FVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALD 213
Query: 528 ----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
++G + M+ + ++ DM G + EA KM E DV W
Sbjct: 214 LGKWIDGFISRREMALGLFLGNALA------DMYAKCGCITEARRVFNKME-ERDVISWS 266
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLD 609
++ M+G+ + C E LD
Sbjct: 267 IIICGLAMYGHADEAFGC--FYEMLD 290
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 242/405 (59%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA++ + L+ +D TFS ++ AC ALE +H R
Sbjct: 656 MISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSH 715
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C +D A +F++MT+R+ SW++MI+G+A++GLG A++IF
Sbjct: 716 LESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFE 775
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ PD F+ V SACS G V G+ +FE M D+GI+P ++HY ++D+LG
Sbjct: 776 EMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRA 834
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH---GNLELGDRCAEIVEQLDP------- 610
G +D+ E+I++MP+EP+ +W ++ CR N++LG + ++ +++P
Sbjct: 835 GKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYV 894
Query: 611 --SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S + + A ++ KK A ++ + + VH + AGD SHP T +IY
Sbjct: 895 LASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYE 954
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L ++ AGY+P T + L+D+++E KEE L HSE+LA++ +L+ + PIRIMK
Sbjct: 955 KLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMK 1013
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH A + IS+++ R++I+RD+ RFHHFKDG CSC DYW
Sbjct: 1014 NLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 113/226 (50%), Gaps = 11/226 (4%)
Query: 370 SRSSQNNGTLEQLD-GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEE 428
S +N TL L GLV++ +EA+++ + + + V+ T+ L+ A + EE
Sbjct: 335 SLKQKNAVTLNGLIVGLVRQDFSEEAVKIF-VGTRNTVDVNADTYVVLLSALAEYSISEE 393
Query: 429 A----KAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ VH H+ R L+ L+++ NG++ MY++C +++ A +F M D SW+T+I
Sbjct: 394 GLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTII 453
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG 542
+ +NG E+AV +S +Q+ + P + I S+C+ L + G +H +++
Sbjct: 454 SALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLD 513
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+ S+ + +V M G G + + + M +V W +M +
Sbjct: 514 LDTSVSNV--LVKMYGECGAMSDYWKVFNSMAEHDEVS-WNTMMGV 556
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
EA+ N + LD + G +EA+ L+ + CIS + +C K
Sbjct: 440 LMEATDRISWNTIISALD---QNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKL 496
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L + VH + L S N ++KMY EC +M D + VF++M E D SW+TM+
Sbjct: 497 LTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGV 556
Query: 486 FAKNGLG-EDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
A + + V +F+ + GL P+ FI + +A S L
Sbjct: 557 MASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPL 596
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF---KQA 505
N ++ Y++ + A VF M ER+ SW +++G+ +G+ E+A +F QA
Sbjct: 100 NHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQA 159
Query: 506 GLKPDDQIFIGVFSAC 521
G +P F + AC
Sbjct: 160 GCRPTSFTFGTLLRAC 175
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPT---FSQLMQAC--GDAKALEEAKAVHEHV 436
+ G V G +EA V + ++ + PT F L++AC G L A VH V
Sbjct: 134 VSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLV 193
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFS--VFSNMTERDLTSWDTMITGFAKNGLGED 494
+ + N ++ MY C + VF RDL +W+ +++ +AK G D
Sbjct: 194 SKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG---D 250
Query: 495 AVDIFSQFK--QAG-----LKPDDQIF 514
F+ FK Q G L+P + F
Sbjct: 251 VASTFTLFKDMQRGDSRIQLRPTEHTF 277
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 231/400 (57%), Gaps = 20/400 (5%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G KEA+ + ++ + + D TFS + G + + + K H VS
Sbjct: 716 QAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVS 775
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
G++K+Y++C +D+A S+F + + + +I A++G E+AV +F + +Q G
Sbjct: 776 VATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEG 835
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++PD + + SAC G V EG F +M + +GI P+++HY VD+LG G L+ A
Sbjct: 836 VRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHA 895
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+ I KMP E + VW L+ C++ G+ ELG+RCA+ + +LDP S A +V N
Sbjct: 896 EQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP----HNSAAHVVLSNI 951
Query: 627 -SELAKEK----ENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
K K + KK+ +N+ E+ +VHE+ AGD SHP+TD+IY ++ L
Sbjct: 952 YCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKL 1011
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
M+ AGY + D++ E KE+AL HSER+A++ GL+++P ++I+KNLRVC
Sbjct: 1012 ELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVC 1068
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K IS ++GRE+I+RD+ RFHHF +G CSC+D W
Sbjct: 1069 GDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 11/239 (4%)
Query: 331 YQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGK 390
Y+ E S G + A V N H D S ++ + T E D
Sbjct: 569 YRSACLETALISMHGRCRELEQARSVFNEMDHGD---VVSWTAMVSATAENRD------- 618
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
KE + ++ + + D T + + C + L K +H V + ++ N
Sbjct: 619 FKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENA 678
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L MYS C +A S F M RDL SW+ M +A+ GL ++AV +F Q + G+KPD
Sbjct: 679 LLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPD 738
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F + V +G L F +++ + G+ + +V + G LDEA+
Sbjct: 739 KLTFSTTLNVSGGSALVSDGKL-FHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSL 796
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ DL ++ L+Q+C D+ L + K HE + + N ++ MY C S+++A +
Sbjct: 22 AADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHA 81
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACS--- 522
+FS M ER++ SW +I+ A+ G A +F + ++ P+ + + +AC+
Sbjct: 82 IFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSR 141
Query: 523 --ALGDVVEGM---LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
A+G + M L E S +V + ++++M G L++A+ +P E
Sbjct: 142 DLAIGRSIHAMIWELGLERASTTATLVGN-----AMINMYAKCGSLEDAIAVFLAIP-EK 195
Query: 578 DVDVWEKL 585
DV W +
Sbjct: 196 DVVSWTAM 203
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL----LSPLRVSTYNGILKMYSECDSMDDAFSV 467
T ++ AC +++ L +++H + L S N ++ MY++C S++DA +V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188
Query: 468 FSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-- 524
F + E+D+ SW M +A+ DA+ IF + L P+ FI AC++L
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD 248
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV--W 582
G + +LH S+ D P + ++++M G G + A + M ++D+ W
Sbjct: 249 GTWLHSLLHEASLGFD----PLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSW 302
Query: 583 EKLMN 587
+++
Sbjct: 303 NAMIS 307
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 3/179 (1%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
P + A G +L + +H + N ++ MY +C + A+SVF
Sbjct: 231 PNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKA 290
Query: 471 MTER---DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M R DL SW+ MI+ + G DA+ IF + + G++P+ I + +A +A G
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
F + G + + +I+ M G+ A ++ + DV W ++
Sbjct: 351 FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML 409
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
+F ++ AC +++AL+ + +H + R + S ++ MY +C S+ +A VF
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKE 498
Query: 471 MT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
M R L +W+ M+ +A+N ++A + Q G+ PD F V S+C
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 37/146 (25%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGED------AVDIFSQ 501
N I+ MY++C A++VF + + D+ SW+TM+ G ED V+ F
Sbjct: 374 NAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTML------GASEDRKSFGKVVNTFHH 427
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG------IVPSMKHYVS--- 552
AG+ P+ FI + +ACS S + D+G I+ + YV
Sbjct: 428 MLLAGIDPNKVSFIAILNACS------------NSEALDFGRKIHSLILTRRRDYVESSV 475
Query: 553 ---IVDMLGSTGYLDEALEFIEKMPM 575
+V M G G + EA ++MP+
Sbjct: 476 ATMLVSMYGKCGSISEAELVFKEMPL 501
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ M+ C ++ A SVF+ M D+ SW M++ A+N ++ ++F + + G+
Sbjct: 576 TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVI 635
Query: 509 PDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
PD C A LG V+ + + D + ++ ++M + G
Sbjct: 636 PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENAL------LNMYSNCGDW 689
Query: 564 DEALEFIEKM 573
EAL F E M
Sbjct: 690 REALSFFETM 699
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 219/373 (58%), Gaps = 13/373 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++ AC + LE ++VH + + + ++ +Y +C S++ A VF M
Sbjct: 315 ISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP 374
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ--AGLKPDDQIFIGVFSACSALGDVVEG 530
ER+L +W+ MI G+A G + A+ +F + G+ + V SACS G V G
Sbjct: 375 ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERG 434
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ FESM YGI P +HY +VD+LG +G +D A EFI++MP+ P + VW L+ C+
Sbjct: 435 LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACK 494
Query: 591 MHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASELAKEKEN---KKLAS 640
MHG +LG AE + +LDP N + AG A+ + KE + KK
Sbjct: 495 MHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWE-EATIVRKEMRDIGIKKNVG 553
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ + V+++VH ++A D+ H + +I A++ LR +MK+AGY+P+ L D+++E K
Sbjct: 554 YSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKAS 613
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+ HSE++A++ GL++ P PIRI KNLR+C DCHSA+K ISKIVGRE+I+RD RFH
Sbjct: 614 EVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFH 673
Query: 761 HFKDGLCSCRDYW 773
FKDG CSC+DYW
Sbjct: 674 RFKDGWCSCKDYW 686
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVD----LPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
V++G+ +AI K+ + VD TF + AC D +LE + +H + R
Sbjct: 186 VQDGRCLDAIAAF----KKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRY 241
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS +NG++ Y +C + + VFS + R++ SW +++ +N E A +F
Sbjct: 242 REDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF 301
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG----MLHFESMSKDYGIVPSMKHYVSIVD 555
Q ++ ++P D + V SAC+ LG + G L ++ ++ V S ++VD
Sbjct: 302 LQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGS-----ALVD 355
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+ G G ++ A + +MP E ++ W ++ G LGD
Sbjct: 356 LYGKCGSIEYAEQVFREMP-ERNLVTWNAMIG-----GYAHLGD 393
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 430 KAVHEHVERLL-SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
+AVH H+ R +PL N ++ MYS+ D + A V S R + +W ++I+G
Sbjct: 27 RAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVH 86
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
N A+ FS ++ + P+D F VF A ++L V G +++ G + +
Sbjct: 87 NRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGK-QLHALALKGGNILDVF 145
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S DM TG EA ++MP ++ W M+
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMP-HRNLATWNAYMS 183
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V + A+ + ++C+ + TF + +A K +H + +
Sbjct: 81 ISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGN 140
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V MYS+ +A ++F M R+L +W+ ++ ++G DA+ F +
Sbjct: 141 ILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKK 200
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
F +P+ F +AC+
Sbjct: 201 FLCVDGEPNAITFCAFLNACA 221
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 230/401 (57%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + +++ +++ + D T ++ + + L + + +H + +
Sbjct: 162 IAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGA 221
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ + ++ MYS+C ++D+ + D W +MI + +G GE+AV +F Q
Sbjct: 222 NSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQ 281
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+Q GL +D F+ + ACS G +GM F+ M + YG+ P ++HY +VD+LG +G
Sbjct: 282 MEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSG 341
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEA I MP+E DV +W+ L++ CR+H N ++ R AE + +L+P S
Sbjct: 342 CLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSN 401
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++ +K +++ KK + LEV+++V ++ GD SHP +++I ++
Sbjct: 402 IHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKE 461
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK GY+P+T V HD D E KE +L+ HSE+LA++ GL++ P +PIR+MKNLR+
Sbjct: 462 LMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRI 521
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K+IS I RE+I+RD RFHHFK G CSC DYW
Sbjct: 522 CSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++ C +A K VH +V + + + + MY + S+ + V M
Sbjct: 91 TLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAM 150
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
R++ +W+T+I G A+NG E +D+++ K +GL+PD + V S+ + L + +G
Sbjct: 151 RIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQ 210
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H E++ G ++ S++ M G L+++++ + PD +W ++
Sbjct: 211 QIHAEAIKA--GANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVLWSSMIAAYG 267
Query: 591 MHGNLELGDRCAEIVEQLD 609
HG G+ + EQ++
Sbjct: 268 FHGR---GEEAVHLFEQME 283
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P+R + ++N ++ + + +D A VF M ER++ +W+ M++G + E+ + +F
Sbjct: 19 PMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFR 78
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G PD+ V C+ L G + YG ++ S+ M +
Sbjct: 79 EMHELGFLPDEFTLGSVLRGCAGLRASYAGK-QVHAYVLKYGYEFNLVVGSSLAHMYMKS 137
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L E + I+ M + +V W L+
Sbjct: 138 GSLGEGEKVIKAMRIR-NVVAWNTLI 162
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 233/403 (57%), Gaps = 15/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G A+E+ +++ + T + +++AC LE + VH HV +
Sbjct: 244 IAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDR 303
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + +N +L MY +C + DA ++FS M +RD+ SW TMI+G A+NG +A+ +F
Sbjct: 304 DLIL--HNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDL 361
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K G P++ +GV ACS G V +G +F SM K +GI P +H +VD+LG G
Sbjct: 362 MKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAG 421
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LDEA++FI +M EPD +W L+ CRMH N L A + +L+P ++ ++ L
Sbjct: 422 KLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPE--DQGARILL 479
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A + +++ KK ++ +E+ VH + AG+ SHP +D+I +
Sbjct: 480 SNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQEL 539
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L + K+ GY+P+T FVL D+ E KE+ L HSE+LA++ G ++S P+RIMKNL
Sbjct: 540 NRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNL 599
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+CGDCH+ K++SK G+ +IIRD RFHHF+ G+CSC DYW
Sbjct: 600 RICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ KEA+ L + + ++ + TFS ++ ACG L A+H + ++ V
Sbjct: 153 GRKKEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVR 209
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ Y + +D VF M DL W+++I GFA++G G A+++F + K++G
Sbjct: 210 SSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFL 269
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ V AC+ + + G +H + D ++ + +++DM G L +A
Sbjct: 270 ANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDLIL----HNALLDMYCKCGCLLDAD 325
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+M + DV W +++
Sbjct: 326 ALFSRMH-DRDVISWSTMIS 344
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE------- 437
L +G A+ +L + + D + +L++ C + + +A+H HV
Sbjct: 41 LCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGG 100
Query: 438 -RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA-KNGLGEDA 495
L VS N ++ MY++ +DDA +F M +R++ SW T++ A G ++A
Sbjct: 101 GATHGSLFVS--NSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEA 158
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + ++ G+ + F V AC G V +H + + G+ + S++D
Sbjct: 159 LRFLVEMRRDGVAANSYTFSSVLGACGTPG--VLAAMHADIIK--VGLDSDVFVRSSLID 214
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G LD ++M + D+ VW ++
Sbjct: 215 AYMKLGDLDSGRGVFDEM-VTCDLVVWNSII 244
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 225/403 (55%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + A+E L+ + + TF + +C D AL + + +H +
Sbjct: 139 ISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGV 198
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS C + D+ V + DL MI+ + +G G+ AV +F Q
Sbjct: 199 DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQ 258
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AG +P++ F+ + ACS G EGM FE M+K YG+ PS+KHY IVD+LG +G
Sbjct: 259 MMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSG 318
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA + I MP++PD +W+ L++ C+ ++ +R AE V +LDP + S L
Sbjct: 319 CLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPH--DSASYVLL 376
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+ E +E+ +K + +E++ ++H++ GD SH +I +
Sbjct: 377 SNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECL 436
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++++ GY P+ V HD++ E KE +L HSE+LA++ LS P PIR+MKNL
Sbjct: 437 EEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNL 496
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+K++SK++GRE+++RD RFHHFKDG CSC DYW
Sbjct: 497 RVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y + ++ A +F M R++ +W+ M+ G +GL E+++ F ++ G
Sbjct: 2 SWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREG 61
Query: 507 LKPDDQIFIGVFSACSALGDVVEG 530
++PD+ +F C+ L DVV G
Sbjct: 62 MQPDEYGLGSLFRCCAGLRDVVSG 85
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GL G +E++ + ++ + D L + C + + + VH +V R
Sbjct: 40 GLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDR 99
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ + + MY C + D + + ++ S +T I+G +NG E A++ F +
Sbjct: 100 DMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMR 159
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG---IVPSMKHYVSIVDMLGST 560
AG++ + F+ ++CS L + +G +++ G +VP M V + G
Sbjct: 160 GAGVEANAVTFVSAVTSCSDLAALAQGQ-QIHALAIKTGVDKVVPVMTSLVHMYSRCGCL 218
Query: 561 G 561
G
Sbjct: 219 G 219
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 225/403 (55%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + A+E L+ + + TF + +C D AL + + +H +
Sbjct: 247 ISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGV 306
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS C + D+ V + DL MI+ + +G G+ AV +F Q
Sbjct: 307 DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQ 366
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AG +P++ F+ + ACS G EGM FE M+K YG+ PS+KHY IVD+LG +G
Sbjct: 367 MMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSG 426
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA + I MP++PD +W+ L++ C+ ++ +R AE V +LDP + S L
Sbjct: 427 CLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPH--DSASYVLL 484
Query: 622 VPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A+ E +E+ +K + +E++ ++H++ GD SH +I +
Sbjct: 485 SNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECL 544
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++++ GY P+ V HD++ E KE +L HSE+LA++ LS P PIR+MKNL
Sbjct: 545 EEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNL 604
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A+K++SK++GRE+++RD RFHHFKDG CSC DYW
Sbjct: 605 RVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFSVFSN 470
T + L+ A D A+ + E + P R V ++N ++ Y + ++ A +F
Sbjct: 79 TANHLLLAYADLGDFPTARGLFERI-----PKRNVMSWNILIGGYVKNGDLETARKLFDE 133
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M R++ +W+ M+ G +GL E+++ F ++ G++PD+ +F C+ L DVV G
Sbjct: 134 MPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSG 193
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GL G +E++ + ++ + D L + C + + + VH +V R
Sbjct: 148 GLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDR 207
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ + + MY C + D + + ++ S +T I+G +NG E A++ F +
Sbjct: 208 DMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMR 267
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG---IVPSMKHYVSIVDMLGST 560
AG++ + F+ ++CS L + +G +++ G +VP M V + G
Sbjct: 268 GAGVEANAVTFVSAVTSCSDLAALAQGQ-QIHALAIKTGVDKVVPVMTSLVHMYSRCGCL 326
Query: 561 G 561
G
Sbjct: 327 G 327
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 241/405 (59%), Gaps = 13/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++E ++ + L+ +D TFS ++ AC ALE +H R
Sbjct: 651 MISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQ 710
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + +L MYS+C +D A VF++M++++ SW++MI+G+A++GLGE A++IF
Sbjct: 711 LESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFE 770
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ G PD F+ V SACS G V G+ +FE M +D+GI+P ++HY ++D+LG
Sbjct: 771 EMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM-EDHGILPHIEHYSCVIDLLGRA 829
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN---LELGDRCAEIVEQLDP-SRLNEK 616
G L + E+I +MPM+P+ +W ++ CR + ++LG + ++ +L+P + +N
Sbjct: 830 GKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYV 889
Query: 617 SKAGLVPVNA--------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ KK A Q+ + + VH + AGD SHP T +IY
Sbjct: 890 LASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYE 949
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L ++K AGY+P T F L+D+++E KEE L HSE+LAV+ L S + PIRIMK
Sbjct: 950 KLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMK 1009
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+A + IS+IV R++I+RD+ RFHHF+DG CSC DYW
Sbjct: 1010 NLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK----ALEEAKAVHEHVERL 439
GLVK+ +EA+ + + + V+ TF L+ A + L + VH H+ R
Sbjct: 345 GLVKQHCSEEAVGIF-MGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRT 403
Query: 440 -LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L L+++ NG++ MY++C ++D A VF + RD SW+T+I+ +NG E A+
Sbjct: 404 GLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMN 463
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
+ +Q + P + I S+C++L + G +H +++ + S+ + ++V M
Sbjct: 464 YCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSN--ALVKMY 521
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G G E+ E M E D+ W +M +
Sbjct: 522 GDCGARSESWEIFNSMA-EHDIVSWNSIMGV 551
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 27/247 (10%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
E++EV + + ++ + TF L+ A LE K VH V + + + N ++
Sbjct: 561 ESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALM 620
Query: 453 KMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
Y++ MD +FS+M+ RD SW++MI+G+ NG ++ +D + D
Sbjct: 621 SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDC 680
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEA 566
F V +AC+++ + GM +H +GI ++ V +++DM G +D A
Sbjct: 681 CTFSIVLNACASVAALERGMEMH------AFGIRSQLESDVVVESALLDMYSKCGRIDYA 734
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD-----------PSRLNE 615
+ M + + W +++ HG LG++ EI E++ S L+
Sbjct: 735 SKVFNSMSQKNEFS-WNSMISGYARHG---LGEKALEIFEEMQRNGACPDHVTFVSVLSA 790
Query: 616 KSKAGLV 622
S AGLV
Sbjct: 791 CSHAGLV 797
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 427 EEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
EEA H+E + L + N ++ +Y++ + A VF M ER+ SW +++
Sbjct: 71 EEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVS 130
Query: 485 GFAKNGLGEDAVDIFSQFKQAG---LKPDDQIFIGVFSACSALG-DVVEGMLHFESMSKD 540
G+ +G+ ++A +F G +P F V AC G D++ + +
Sbjct: 131 GYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSK 190
Query: 541 YGIVPSMKHYVSIVDMLG--STGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+ +++ M G S G +A + + P+ D+ W LM++
Sbjct: 191 TIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVR-DLITWNALMSV 239
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 228/406 (56%), Gaps = 32/406 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+ + + K + ++ TF + A + + K +H + +
Sbjct: 612 VSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGY 671
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ +Y++C ++DD SW++MITG++++G G +A+ +F
Sbjct: 672 DSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFED 718
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
KQ + P+ F+GV SACS +G V EG+ +F SMS+ + +VP +HY +VD+LG +G
Sbjct: 719 MKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSG 778
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L A F+E+MP++PD VW L++ C +H N+++G+ A + +L+P K A
Sbjct: 779 LLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEP-----KDSATY 833
Query: 622 VPVN--------------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
V V+ ++ K++ KK ++ +EV + VH + AGD +HP D IY
Sbjct: 834 VLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIY 893
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+RGL + E GY+P +L D + K+ + HSERLA++ GLLS + P+ +
Sbjct: 894 EYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVF 953
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+ +K +SKI R +I+RD+ RFHHFK G CSC+DYW
Sbjct: 954 KNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 335 PNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKV 391
PN Q+ SY+ I+ GM + V+ D + + S + QLD L K ++
Sbjct: 369 PNGKQFHSYA--IKAGMTSDIVVEG-SLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQI 425
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+++ G++ Q T+ +++ C A + + +H V + V + +
Sbjct: 426 FTQMQIEGIVPNQ------FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVL 479
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY++ +D A +F + E D+ SW MI G+ ++ +A+++F + + G+K D+
Sbjct: 480 IDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDN 539
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F SAC+ + + +G +H +S Y S+ + ++V + G + EA
Sbjct: 540 IGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREAYAAF 597
Query: 571 EKMPMEPDVDVWEKLMN 587
+++ + +V W L++
Sbjct: 598 DQIYAKDNVS-WNSLVS 613
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ AC + E K +H V + N ++ +YS ++ A +F M++RD
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
S++++I+G A+ G A+ +F + KPD + SAC+++G + G F
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGK-QFH 375
Query: 536 SMSKDYGIVPSMKHYVSIVDM----------------LGSTGYLDEALEFIEKMPME--- 576
S + G+ + S++D+ G L+++ + +M +E
Sbjct: 376 SYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIV 435
Query: 577 PDVDVWEKLMNLCRMHGNLELGDR 600
P+ + ++ C G +LG++
Sbjct: 436 PNQFTYPSILKTCTTLGATDLGEQ 459
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 406 ISVDLPTFSQLMQAC-GDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMD 462
+ D F+ +++ C G+A + + +H + + S ST+ N ++ +Y + +
Sbjct: 159 VEFDERIFAVVLRGCSGNAVSFRFVEQIH--AKTITSGFESSTFICNPLIDLYFKNGFLS 216
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ----------FKQAGLKPDDQ 512
A VF N+ RD SW MI+G ++NG E+A+ +F Q F + G +
Sbjct: 217 SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGL 276
Query: 513 IFIGVFSA----CSAL-------GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ FS+ C+AL G++ F MS+ + Y S++ L G
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV-----SYNSLISGLAQQG 331
Query: 562 YLDEALEFIEKMPME---PDVDVWEKLMNLCRMHGNL 595
Y++ AL +KM ++ PD L++ C G L
Sbjct: 332 YINRALALFKKMNLDCQKPDCVTVASLLSACASVGAL 368
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 227/396 (57%), Gaps = 11/396 (2%)
Query: 389 GKVKEAIEVLGLLEKQCIS-VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
GK KEA+ + L+ I+ D T + AC A++ +H +++R L
Sbjct: 338 GKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHL 397
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
+ ++ MY++C S++ A VF ++ ERD+ W MI G +G G+ A+D+F + ++A +
Sbjct: 398 ISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKV 457
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F V ACS G V EG + F M YG+VP MKHY +VD+LG G+L+EA+
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSK 618
E I +M P VW L+ C +H N+ELG+ ++ + +L+P S + K+
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTG 577
Query: 619 AGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+L ++ E KK + +E VHE+ GD +HP + IY+ + + ++K
Sbjct: 578 RWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLK 637
Query: 679 EAGYIPETRFVLHDIDQEG-KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
GY P +L I+++ KE+AL HSE+LA++ GL++ PIR++KNLR+CGDCH
Sbjct: 638 SVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCH 697
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ K++S++ R++++RD RFHHF+DG CSC DYW
Sbjct: 698 AFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 36/235 (15%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A+E+ +E++ + + T ++ AC LE + V ++ER + ++ N +
Sbjct: 209 EDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAM 268
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK----------------------- 488
L MY++C S+DDA +F M ERD+ SW M+ G+AK
Sbjct: 269 LDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWN 328
Query: 489 --------NGLGEDAVDIFSQFKQAGL-KPDDQIFIGVFSACSALGDV-VEGMLHFESMS 538
NG ++A+ IF++ + + + KPD+ + SAC+ LG + + G +H
Sbjct: 329 VLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV--YI 386
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
K GIV + S+VDM G L++ALE + E DV VW ++ MHG
Sbjct: 387 KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHG 440
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
Query: 409 DLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
DLP TF +++A + KA AVH +L + + N +++ Y C + A
Sbjct: 122 DLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE 181
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F ++ +D+ SW++MI+ FA+ EDA+++F + ++ + P+ +GV SAC+
Sbjct: 182 RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKL 241
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
D+ G + + GI + +++DM G +D+A + ++MP E DV W +
Sbjct: 242 DLEFGRWVCSYIERK-GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIM 299
Query: 586 MNLCRMHGNLELGD 599
++ G ++GD
Sbjct: 300 LD-----GYAKMGD 308
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 246/441 (55%), Gaps = 24/441 (5%)
Query: 345 GNIQNGMMASQVLNNCKHE--DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE 402
GN M A NC H D S N + G + G EAI+ ++E
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNT----LVTGYTQNGLASEAIDAYNMME 417
Query: 403 KQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+C +P T+ ++ A AL++ +H + + L V ++ +Y +C
Sbjct: 418 -ECRDT-IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
++DA S+F + W+ +I +G GE+A+ +F +K D F+ + S
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ACS G V EG F+ M K+YGI PS+KHY +VD+LG GYL++A E + MP++PD
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-----------NEKSKAGLVPVNASE 628
+W L++ C+++GN ELG ++ + ++D + N + G++ V +
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRS-- 653
Query: 629 LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF 688
LA+++ +K + + V SK + G+ +HP+ +IY ++ L A+MK GY+P+ F
Sbjct: 654 LARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSF 713
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
V DI+++ KE+ L +HSERLA++ G++S+P R+PIRI KNLRVCGDCH+A K IS+I
Sbjct: 714 VYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISE 773
Query: 749 RELIIRDAKRFHHFKDGLCSC 769
RE+++RD+ RFHHFKDG+CSC
Sbjct: 774 REIVVRDSNRFHHFKDGICSC 794
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G A+ VL ++ + + +D T + ++ C + + +H HV +
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S + VS N ++ MYS+ + DA VF M RDL SW+++I + +N A+
Sbjct: 253 LDSDVFVS--NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGD--VVEGMLHF----ESMSKDYGIVPSMKHYVS 552
F + G++PD + + S S L D + +L F E + KD I ++
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNAL----- 365
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V+M GY++ A +++P + D W L+
Sbjct: 366 -VNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVT 398
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
+ V+ GK EA+ + L C + D TF +++AC +L + K VH V
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVF 148
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
++ V ++ +YS +D A VF +M +D+ SW+ MI+GF +NG A+
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMKHYVSIVDM 556
+ ++ K G+K D + C+ DV+ G+L H + +G+ + ++++M
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNALINM 266
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L +A ++M + D+ W ++
Sbjct: 267 YSKFGRLQDAQMVFDQMEVR-DLVSWNSII 295
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 231/405 (57%), Gaps = 15/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE---EAKAVHEHVE 437
+ G G KEA+++ + + D ++ AC ALE A + + E
Sbjct: 218 MIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNE 277
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L +P+ + ++ MY++C MD A+ VF M ++D+ W+ I+G A +G + A
Sbjct: 278 FLGNPVLGT---ALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFG 334
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F Q +++G++PD F+G+ AC+ G V EG +F SM + + + P ++HY +VD+L
Sbjct: 335 LFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLL 394
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR----- 612
G G+LDEA + ++ MPME + VW L+ CR+H + +L + + + L+PS
Sbjct: 395 GRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYV 454
Query: 613 ----LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ S + E+ KK+ + +EV VHE+ GDTSHP ++KIYA
Sbjct: 455 LLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYA 514
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +K +GY+P T +VL DI++E KE + HSE+LA++ GL+S+ IR++K
Sbjct: 515 KLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVK 574
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH A+K IS+ GRE+I+RD RFH F DG CSC+DYW
Sbjct: 575 NLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 46/257 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV +E+IE+ + K+ +S D TF L++AC A+ L+ + H +
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC--ARLLDSKLGIKLHGLVVK 136
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAF--------------------------------- 465
+ + ++ +Y +C +D+AF
Sbjct: 137 AGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDM 196
Query: 466 -----SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
SVF M E+D+ SW +MI G+A NGL ++A+D+F + G +PD +GV A
Sbjct: 197 FRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCA 256
Query: 521 CSALGDVVEGMLHFESMSKDYGIV-PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C+ LG + G M ++ + P + +++DM G +D A E M + D+
Sbjct: 257 CARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGMR-KKDI 313
Query: 580 DVWEKLMNLCRMHGNLE 596
VW ++ M G+++
Sbjct: 314 VVWNAAISGLAMSGHVK 330
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 8/184 (4%)
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
+L+ K VH + RL N +L+ + + + +F E ++ ++TMI
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
G N +++++I+ ++ GL PD F + AC+ L D G + + G
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLG-IKLHGLVVKAGCE 140
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
S+V + G G++D A + + +P E +V W +++ G + +G +C E
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIIS-----GYIGVG-KCREA 193
Query: 605 VEQL 608
++
Sbjct: 194 IDMF 197
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 233/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ER 438
+ G + G + AI + + K + + T + ++ AC +L K VH + E
Sbjct: 382 MISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L + VST ++ MY++C ++ +A+ +F +M+E++ +W+TMI G+ +G G +A+ +
Sbjct: 442 LEPNIYVST--ALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKL 499
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+++ G P F+ V ACS G V EG F +M Y I P ++HY +VD+LG
Sbjct: 500 YNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILG 559
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
+G L++ALEFI+KMP+EP VW L+ C +H + ++ +E + +LDP +
Sbjct: 560 RSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVL 619
Query: 614 --NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N S P AS ++ K+++ K L+EV H + +GD SH IYA
Sbjct: 620 LSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAK 679
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +M+E GY ET LHD+++E KE A+ HSE+LA++ GL+++ IRI+KN
Sbjct: 680 LEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKN 739
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+A K ISKI R +++RDA RFHHFKDG+CSC DYW
Sbjct: 740 LRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+L+P + + I Y++ + +D A +F E+ + +W+ MI+G+ +NG E A+ +
Sbjct: 342 ILNPTVSTAFTAI---YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISL 398
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + P+ + SAC+ LG + G + K + P++ ++VDM
Sbjct: 399 FKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW-VHHLIKSENLEPNIYVSTALVDMYA 457
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G + EA + + M E + W ++ +HG
Sbjct: 458 KCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHG 491
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++GLVK ++I++ + + VD T + ++ A + + L+ + ++
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
G++ +YS+C ++ A +F + DL +++ MI+GF NG E +V +F
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 501 QFKQAGLKPDDQIFIGVFSACSALG 525
+ +G + +G+ S G
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFG 324
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D T++ + AC + K L A H ++ S + V + ++ +Y + + A
Sbjct: 107 LSPDNFTYAFAVAACSNDKHLMLLHA-HSIIDGYGSNVFVGS--ALVDLYCKFSRVVYAR 163
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M ERD W+TMI G KN +D++ +F + G++ D V A + L
Sbjct: 164 KVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQ 223
Query: 526 DVVEGM 531
++ GM
Sbjct: 224 ELKVGM 229
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 235/403 (58%), Gaps = 22/403 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL---RV 445
G EAI + ++ + T ++ +C L K +H + SPL +
Sbjct: 373 GNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRS--SPLFSQSL 430
Query: 446 STYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
N ++ MY +C +++ A VF + + R + +W MI +A+NG+GE+A+++F +
Sbjct: 431 MLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMV 490
Query: 504 -QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G +P+ F+ V SACS LG + + HF SM D+G+ P+ HY +VD+LG G
Sbjct: 491 IDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGR 550
Query: 563 LDEALEFIEKMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA + + + E DV W ++ C+M+G+LE R A+ V +L+P N + L
Sbjct: 551 LGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPE--NVAGRVLL 608
Query: 622 VPVNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
V A+ ++A+ + KK A ++ +E+ ++VHE+ D SHP +IY+ +
Sbjct: 609 SNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSEL 668
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++KEAGY+P+T+ VL D+D+E K + L HSERLA++ G++S+P +R++KNL
Sbjct: 669 ERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNL 728
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K IS+IVGR++I+RD RFHHFKDG+CSC DYW
Sbjct: 729 RVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 11/226 (4%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE-RLLSPL 443
L +G+++ A E+L L +VD+ ++ L++ L+E + + +E R ++
Sbjct: 273 LSDQGELRGAREMLRYLS----AVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATT 328
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+ ++ +Y +C +DDA V M R SW MI +A+NG +A+++F
Sbjct: 329 VVA--GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMD 386
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G +P D I V +C+ LG + G + S+ +++ M G G L
Sbjct: 387 LEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNL 446
Query: 564 DEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ A E E +P+ V W ++ R + +G+ E+ +++
Sbjct: 447 ELAREVFESVPLRTRSVVTWTAMI---RAYAQNGVGEEAIELFQEM 489
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 227/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ + E + + ++ + D ++ AC AL++ K +H ++ +
Sbjct: 392 MISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNG 451
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY + ++DA VF + E+ +++W+ +I G A NGL + ++ FS
Sbjct: 452 LKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFS 511
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K+ G+ P++ F+ V AC +G V EG HF SM +++ I P++KHY +VD+LG
Sbjct: 512 EMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRA 571
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--LNE--- 615
G L EA E IE MPM PDV W L+ C+ +G+ E G+R + +L P N
Sbjct: 572 GMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLS 631
Query: 616 ---KSKAGLVPV-NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
SK V V + ++ K +++E +VHE+ AGD +HP+ + I ++
Sbjct: 632 NIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLD 691
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K GY P+TR V DID+E KE L HSE+LA++ GL++ PIRI+KNLR
Sbjct: 692 EMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLR 751
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH+A K+ISK RE+++RD RFHHFK G CSC DYW
Sbjct: 752 ICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y +C ++ A ++F +M ++D SW MI+G+A+ + + +F + + G
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG 416
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
KPD+ I + V SAC+ L + +G + K+ G+ ++ ++++M G +++A
Sbjct: 417 TKPDETILVSVISACTHLAALDQGKWIHAYIRKN-GLKINIILGTTLINMYMKLGCVEDA 475
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
LE + + E V W L+ M+G
Sbjct: 476 LEVFKGLE-EKGVSTWNALILGLAMNG 501
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFS 466
+D+ +++ ++ +EEAK V++ + P R V N ++ ++ + ++++A
Sbjct: 190 LDMVSWNSMLAGYVLVGNVEEAKDVYDRM-----PERNVIASNSMIVLFGKKGNVEEACK 244
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F+ M ++DL SW +I+ + +N + E+A+ +F + G+ D+ + + V SACS L
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLV 304
Query: 527 VVEGML 532
V+ G L
Sbjct: 305 VITGKL 310
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 344 SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVK---------EA 394
SG ++ AS++L E F ++S Q +E +G + +K +A
Sbjct: 52 SGFFKDSFAASRLLKF-STELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKA 110
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
I V + + ++ D T+ L Q+C A + K + +HV ++ V N ++ M
Sbjct: 111 IWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINM 170
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y+ C ++ DA VF + D+ SW++M+ G+ G E+A D++ + + + + +
Sbjct: 171 YAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMI 230
Query: 515 I 515
+
Sbjct: 231 V 231
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 232/392 (59%), Gaps = 13/392 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG-- 450
EA+ + ++ I +D +QAC D L++ K +H ++++ + + G
Sbjct: 185 EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK--HEIEIDPILGCV 242
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C +++A VF M E+ ++ W MI+G+A +G G +A++ F + + AG++P+
Sbjct: 243 LIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPN 302
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
F G+ +ACS G V E L FESM + +G PS++HY +VD+LG G L EA E I
Sbjct: 303 QMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELI 362
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL- 629
E MP++P+ +W L+N C +HGNLELG + +I+ Q+DP + A E
Sbjct: 363 ENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWN 422
Query: 630 --------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
KE+ KL +++ V HE+ AGD SHP+ +I ++ + +++E G
Sbjct: 423 QAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEG 482
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y P+ +L D++ + KE A+ HSE+LAV+ GL+S+ IRI+KNLRVC DCH+ +K
Sbjct: 483 YKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIK 542
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ISK+ RE+++RD RFH FKDG C+C DYW
Sbjct: 543 LISKVYAREILMRDRTRFHLFKDGNCTCGDYW 574
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC ALEE + +H H+ ++ + T N +L +YS+ + A +F +
Sbjct: 120 TFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
+RD +A+++F + + AG+K D+ + AC+ LG + +G
Sbjct: 180 DQRD-----------------TEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 222
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + I P + ++DM G L+EA+E KM E V VW +++
Sbjct: 223 WIHAYIKKHEIEIDPILG--CVLIDMYAKCGDLEEAIEVFRKME-EKGVSVWTAMISGYA 279
Query: 591 MHG 593
+HG
Sbjct: 280 IHG 282
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 222/379 (58%), Gaps = 12/379 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDD 463
IS D + + AC AL E + +H V +R L V+ N I+ MY +C S+ D
Sbjct: 428 ISPDRILYITALDACASLAALSEGRQIHACVAADRRLDR-DVTLGNAIVSMYGQCGSLRD 486
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A F M RD SW+ M++ A++G ED D+F Q G + F+ + SAC+
Sbjct: 487 ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAH 546
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
G V G HF +M+ D+G+VP+ +HY +VD+LG G L +A ++ MP+ PD W
Sbjct: 547 AGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWM 606
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEKSKAGLVPVNAS--ELAKEKE 634
LM CR++G+ E G AE V +L + N S AG A+ ++ +
Sbjct: 607 ALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLG 666
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
+K+ + +E+RSKVHE+ D SHP+++ IYA + + ++ AGY T VLHD++
Sbjct: 667 LRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVE 726
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE+ L HSE+LA++ G++S+P + +R++KNLRVC DCH+A K ISK+ GRE+++R
Sbjct: 727 EEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVR 786
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D +RFHHFKDG CSC DYW
Sbjct: 787 DVRRFHHFKDGACSCGDYW 805
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 23/270 (8%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V G AI + + ++ I++D F ++ AC + L + +H
Sbjct: 100 ISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGL 159
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTER--DLTSWDTMITGFAKNGLGEDAVDIF 499
L+ + ++ MY C S+ DA ++F ++ ER D+ W+ MIT ++NG +A++IF
Sbjct: 160 GLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIF 218
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDV----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ Q G+ PD F+ VF ACS+ + V+G F + + G+ + ++V+
Sbjct: 219 YRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKG---FHTCLDETGLGSDVVVATALVN 275
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
G +D A EF MP E + W ++ G+L VE L
Sbjct: 276 AYARCGEIDCAREFFAAMP-ERNAVSWTSMIAAFAQIGHL-------LAVETFHAMLLE- 326
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLE 645
G+VP ++ A + + L + L+E
Sbjct: 327 ----GVVPTRSTLFAALEGCEDLHTARLVE 352
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY C S++ A VF + + + W +I+ + G A+ +F + Q G+
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLD 564
D +F+ V SACS+ + G ++H ++ G IV S ++V M G G L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVAS-----ALVSMYGRCGSLR 180
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
+A + DV +W ++
Sbjct: 181 DANALFGHLERHLDVVLWNAMIT 203
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+PT S L A + L A+ V + + V+ ++ Y+ CD +DA VFS
Sbjct: 329 VPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFS 388
Query: 470 NMTERDLTSWD-----TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
R+ WD MI +A+ ++ + G+ PD ++I AC++L
Sbjct: 389 ---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASL 445
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ EG ++ D + + +IV M G G L +A + + MP ++ W
Sbjct: 446 AALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNA 504
Query: 585 LMNLCRMHGNLELGDRC----AEIVEQLDPSR------LNEKSKAGLV 622
+++ HG +E D C A + E D R L+ + AGLV
Sbjct: 505 MLSASAQHGRVE--DCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLV 550
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 228/406 (56%), Gaps = 19/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-- 439
+DG V+ ++++A+ L ++ I + TF+ L++AC + LE +H V +
Sbjct: 351 IDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNF 410
Query: 440 -LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
P ST ++ MY +C D + +F + D +W+T++ F+++GLG +A++
Sbjct: 411 KRDPFVSST---LVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIET 467
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F+ GLKP+ F+ + CS G V +G+ +F SM K YG+VP +HY ++D+LG
Sbjct: 468 FNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLG 527
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L EA +FI MP EP+V W + C++HG++E A+ + +L+P N +
Sbjct: 528 RAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPE--NSGAH 585
Query: 619 AGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A E + K+ KL + +++R+K H + D SHP+ +IY
Sbjct: 586 VLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIY 645
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L Q+K GY+P+T VL D+D KE+ L HSER+AV+ LL+ P PI +
Sbjct: 646 EKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVK 705
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCHSALK ISK+ R +I+RD RFHHF +G CSC DYW
Sbjct: 706 KNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + L+Q K L + K +H + R N L +YS+C +D +F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M++R++ SW ++ITGFA N ++A+ F Q + G V AC++LG +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 529 EGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
G +H + +G + +V ++ DM G L +A + E+MP + D +W +
Sbjct: 194 FGTQVHCLVVKCGFGC----ELFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSM 248
Query: 586 MN 587
++
Sbjct: 249 ID 250
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG VK G K+A+ + + +D + AC KA K++H + +L
Sbjct: 248 MIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG 307
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIF 499
N + MYS+ M A +VF ++ + S +I G+ + E A+ F
Sbjct: 308 FEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTF 367
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
++ G++P++ F + AC+ + G LH + + ++ P + ++VDM G
Sbjct: 368 VDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSS--TLVDMYG 425
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G D +++ +++ PD W L+ + HG
Sbjct: 426 KCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG 459
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++QAC A++ VH V + + + + MYS+C + DA F M
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+D W +MI GF KNG + A+ + + + D + SACSAL
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSAL 290
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 229/396 (57%), Gaps = 18/396 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ ++ + T ++ C AL++ + +H H+ + + +
Sbjct: 391 KEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETAL 450
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C M +A SVF M +RD+ W++M+ +A++G ++ + +F+Q + G K D
Sbjct: 451 INMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADA 510
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V SA S G V +G +F +M +D+ I P+ + Y +VD+LG G + EA++ +
Sbjct: 511 VSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVL 570
Query: 572 KMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---- 626
K+ PD +W L+ CR H + AE V + DPS S A +V N
Sbjct: 571 KLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSH----SGAYVVLSNVYAAA 626
Query: 627 ---------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+L + + KK ++ +E+ ++VHE+ GD SHP IYA + L ++M
Sbjct: 627 GDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEM 686
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+ AGYIP+T+ +LHD++ E KE+ L HSERLA++ GL+S+P P+R++KNLRVC DCH
Sbjct: 687 RAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCH 746
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+A K ISK+ GRE+++RD RFH+FKDG CSC+DYW
Sbjct: 747 TATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + G L++ I + TF ++ +L + K +HE V+ V ++
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+Y C++ A+ +F +M +D+ +W M +A+NG ++A+ +F + + G +P
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ V C+ L + +G S + G M ++++M G G + EA EK
Sbjct: 411 TLVAVLDTCAHLAALQKGR-QIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEK 469
Query: 573 MPMEPDVDVWEKLMNLCRMHG 593
M + D+ VW ++ HG
Sbjct: 470 MA-KRDILVWNSMLGAYAQHG 489
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D F L+Q C AK ++ + VH HV +++MY++C S+ +A VF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +D+ +W MI + + G + A+ +F Q ++ + P ++ + +AC++ +
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+GM +H + + + G + ++++M G + A + +++ DV W ++
Sbjct: 124 DGMEIHGQILQQ--GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMIA 180
Query: 588 LCRMHGNLELG 598
C H L
Sbjct: 181 ACVQHDQFALA 191
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + A GD L E K ++ V + V N + M+ + DA +F +M
Sbjct: 209 TLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM 268
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+RD+ +W+ +IT + +N +AV +F + +Q G+K +D F+ + + ++L + +G
Sbjct: 269 VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKG 327
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ ++ AC ++L++ +H + + V ++ MY++C S+ A+ F +
Sbjct: 108 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 167
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW MI ++ A ++ + + G+ P+ VF+A + EG
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK 227
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+ S+ + ++ S ++M G+ G L +A E M ++ DV W ++
Sbjct: 228 FIY-SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITF 282
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 232/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + KEA+ + ++K + + T ++ +C A E K VH ++++
Sbjct: 294 MISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 353
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V+ ++ Y++C +D + VF M+ +++ +W +I G A NG G+ A++ FS
Sbjct: 354 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 413
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +KP+D FIGV SACS V +G F SM +D+ I P ++HY +VD+LG
Sbjct: 414 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 473
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G+L+EA +FI+ MP P+ VW L+ CR H N+E+ ++ E + +L+P+
Sbjct: 474 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 533
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + G V + L KEKE KK+ +L+E+ VHE+ + D H + +I+ +
Sbjct: 534 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 593
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ Q+K GY+P T + ++E KE ++ HSE+LA+++GL+ + R IRI KNLR
Sbjct: 594 KMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLR 653
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH+A K IS++ R +I+RD RFHHFKDGLCSC DYW
Sbjct: 654 MCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + A+ + + ++ + D TFS +++AC KAL E + VH + L
Sbjct: 92 MIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI--LK 149
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S + + + N +++MY+ C + A VF M ER + +W++M++G+ KNGL ++ V +
Sbjct: 150 SGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKL 209
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + + ++ DD I V AC L ++ G L E + G+ + S++DM
Sbjct: 210 FRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSK-GLRRNNTLTTSLIDMYA 268
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE 603
G +D A + ++M + DV W +++ DRC E
Sbjct: 269 KCGQVDTARKLFDEMD-KRDVVAWSAMIS------GYAQADRCKE 306
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K G E +++ + + I D T ++ ACG LE + + E++ +
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYI--VS 250
Query: 441 SPLRV--STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LR + ++ MY++C +D A +F M +RD+ +W MI+G+A+ ++A+++
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
F + ++ + P++ + V +C+ LG G +HF K + ++ ++D
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG--TQLIDFY 368
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
GY+D ++E ++M + +V W L+
Sbjct: 369 AKCGYIDRSVEVFKEMSFK-NVFTWTALI 396
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 212/378 (56%), Gaps = 10/378 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ D T L+QAC AL+ + + E+ + N ++ MY+ C ++ A+
Sbjct: 507 VKPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYGCELKVRNSVITMYTRCGCVEKAY 566
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF + ++ + +W MI G A NG GEDA+ F + ++G+ PD Q F GV SACS G
Sbjct: 567 QVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVPDGQTFTGVLSACSHSG 626
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK-MPMEPDVDVWEK 584
V EG F+ M +Y ++P+++HY IVD++G G LDEA E + K M + PD +W
Sbjct: 627 LVDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGLLDEAYELVVKEMKVAPDATIWRT 686
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAG--LVPVNASELAKEKEN 635
L+ CR+HG+++LG++ + +L + LN + AG +L +E E
Sbjct: 687 LLGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLNTYAAAGDWEKVAEVRKLMRENEI 746
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+ +E+ ++HE+ A D SHP +IY + + ++ AGY+P LHD+D
Sbjct: 747 QTTPGCTTVELNGELHEFIADDASHPRKAEIYGKLDEINRHLRIAGYVPHVSSDLHDLDS 806
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
EGKE AL HSE+LA++ LL P R PIR+ KNLRVC DCH+ K+ S + R +I+RD
Sbjct: 807 EGKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRVCVDCHNFTKVFSGVYNRLVIVRD 866
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHF G CSC DYW
Sbjct: 867 RTRFHHFNGGQCSCNDYW 884
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-NGILKMYSECDSMDDAFSVFSN 470
+ + L++ C + L A+ +H +V + LR S +++ Y+ C D A VF
Sbjct: 413 SLAILLKPC---RTLSHARQLHANVV-IEGHLRDSLLATSLMRSYAICGVGDCARKVFDE 468
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK--QAGLKPDDQIFIGVFSACSALGDVV 528
M +D +W+ +IT +A+N +D + +F + + ++ +KPD+ I + AC++LG +
Sbjct: 469 MVMKDTVAWNVLITCYARNKRTKDTLWLFDEMRRGESEVKPDEVTCILLLQACTSLGALD 528
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +E + ++G +K S++ M G +++A + P + V W ++
Sbjct: 529 FGEQIWE-YAVEHGYGCELKVRNSVITMYTRCGCVEKAYQVFCHTP-QKSVVTWSAMI 584
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 228/412 (55%), Gaps = 22/412 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV---- 436
+DG + G+ EA+ + + + + D + + A E + +H V
Sbjct: 225 MMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGG 284
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT---ERDLTSWDTMITGFAKNGLGE 493
R L ++ MY +C S+++A +VF ++ +RD+ +W+ MI G+A +G
Sbjct: 285 RRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSR 344
Query: 494 DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
+A++ F Q + GL P D FIGV +ACS G V EG F +M ++YGIVP ++HY +
Sbjct: 345 EALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCM 404
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
VD+LG G ++EA + ++ M +PD +W L+ CR+H NL LG R + + L + L
Sbjct: 405 VDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQR---VADYLVGNGL 461
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHP 661
L+ + K +E ++ S + +EV +V E+ AGD SHP
Sbjct: 462 ANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHP 521
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
+ +IYA + + + + G++P T VLHD+D KE AL HSE+LA++ GL+S+P R
Sbjct: 522 RSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPR 581
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+I+KNLR C DCH+ LK++S+ GR+++ RD RFHHF DG CSC DYW
Sbjct: 582 TGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + +L Y++ +DDA +F + +DL W+ M+ G+ ++G +A+ +F Q +
Sbjct: 188 VVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLR 247
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLH--FESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++PD+ + SA + LG G LH + + + + + ++VDM G
Sbjct: 248 SGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCG 307
Query: 562 YLDEALEFIEKMPMEPDVDV--WEKLMNLCRMHGN 594
L+EA+ + D DV W ++N MHG
Sbjct: 308 SLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGR 342
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 238/402 (59%), Gaps = 15/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GLV+ G+ + A+ + + + IS + T S ++QAC LE + +H +L L
Sbjct: 278 GLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKL--GL 335
Query: 444 RVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ Y G ++ +Y +C +MD A SVF +TE D+ + ++MI +A+NG G +A+++F +
Sbjct: 336 DGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFER 395
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K GL P+ FI + AC+ G V EG F S+ ++ I ++ H+ ++D+LG +
Sbjct: 396 LKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSR 455
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L+EA IE++ PDV +W L+N C++HG +E+ ++ + +L P N
Sbjct: 456 RLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTN 514
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AG + ++ + KK + + ++V +VH + AGD SHP + +I+ ++ G
Sbjct: 515 LYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHG 574
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR-APIRIMKNLR 731
L ++K GY P TRFVL D+D+E K +L HSE+LA+++ L + R IRI KNLR
Sbjct: 575 LMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLR 634
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCHS +K +S + GR++I RD+KRFHHFK GLCSC+DYW
Sbjct: 635 VCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLR 444
+ GK KEA+E G + + + D TFS + +A + + H L L L
Sbjct: 77 ISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLD 136
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ ++ MY++ D M DA VF + E+D+ + +I G+A++GL +A+ IF
Sbjct: 137 GFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVN 196
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGML 532
G+KP++ + C LGD+V G L
Sbjct: 197 RGVKPNEYTLACILINCGNLGDLVNGQL 224
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ CG+ L + +H V + V++ +L MYS C+ ++D+ VF+ +
Sbjct: 205 TLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL 264
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ +W + + G +NG E AV IF + + + P+ + ACS+L ++E
Sbjct: 265 DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA-MLEVG 323
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+++ G+ + +++++ G G +D+A + + E DV
Sbjct: 324 EQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLT-ELDV 370
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-NGILKMYSECDSMDDAFSVFSNM 471
+S L+ K+L +AVH +V + S S + ++ Y +C S+ +A +F +
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIK--SGFSYSFLGHKLIDGYIKCGSLAEARKLFDEL 61
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
R + +W++MI+ +G ++AV+ + G+ PD F + A S LG + G
Sbjct: 62 PSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQ 121
Query: 531 -------MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+L E + G V S ++VDM + +A + + +E DV ++
Sbjct: 122 RAHGLAVVLGLEVLD---GFVAS-----ALVDMYAKFDKMRDA-HLVFRRVLEKDVVLFT 172
Query: 584 KLM 586
L+
Sbjct: 173 ALI 175
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 222/379 (58%), Gaps = 12/379 (3%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDD 463
IS D + + AC AL E + +H V +R L V+ N I+ MY +C S+ D
Sbjct: 428 ISPDRILYITALDACASLAALSEGRQIHACVAADRRLDR-DVTLGNAIVSMYGQCGSLRD 486
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A F M RD SW+ M++ A++G ED D+F Q G + F+ + SAC+
Sbjct: 487 ARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAH 546
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
G V G HF +M+ D+G+VP+ +HY +VD+LG G L +A ++ MP+ PD W
Sbjct: 547 AGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWM 606
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEKSKAGLVPVNAS--ELAKEKE 634
LM CR++G+ E G AE V +L + N S AG A+ ++ +
Sbjct: 607 ALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLG 666
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
+K+ + +E+RSKVHE+ D SHP+++ IYA + + ++ AGY T VLHD++
Sbjct: 667 LRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVE 726
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE+ L HSE+LA++ G++S+P + +R++KNLRVC DCH+A K ISK+ GRE+++R
Sbjct: 727 EEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVR 786
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D +RFHHFKDG CSC DYW
Sbjct: 787 DVRRFHHFKDGACSCGDYW 805
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V G AI + + ++ I++D F ++ AC + L + +H
Sbjct: 100 ISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGL 159
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTER--DLTSWDTMITGFAKNGLGEDAVDIF 499
L+ + ++ MY C S+ DA ++F ++ ER D+ W+ MIT ++NG +A++IF
Sbjct: 160 GLQEIVASALVSMYGRCGSLRDANALFGHL-ERHLDVVLWNAMITANSQNGSPREALEIF 218
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDV----VEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ Q G+ PD F+ VF ACS+ + V+G F + + G+ + ++V+
Sbjct: 219 YRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKG---FHACLDETGLGSDVVVATALVN 275
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D A +F +MP E + W ++
Sbjct: 276 AYARCGEIDCARKFFAEMP-ERNAVSWTSMI 305
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY C S++ A VF + + + W +I+ + G A+ +F + Q G+
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLD 564
D +F+ V SACS+ + G ++H ++ G IV S ++V M G G L
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVAS-----ALVSMYGRCGSLR 180
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
+A + DV +W ++
Sbjct: 181 DANALFGHLERHLDVVLWNAMIT 203
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 21/228 (9%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
+PT S L A + L A+ V + + V+ ++ Y+ CD +DA VFS
Sbjct: 329 VPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFS 388
Query: 470 NMTERDLTSWD-----TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
R+ WD MI +A+ ++ + G+ PD ++I AC++L
Sbjct: 389 ---AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASL 445
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ EG ++ D + + +IV M G G L +A + + MP ++ W
Sbjct: 446 AALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEIS-WNA 504
Query: 585 LMNLCRMHGNLELGDRC----AEIVEQLDPSR------LNEKSKAGLV 622
+++ HG +E D C A + E D R L+ + AGLV
Sbjct: 505 MLSASAQHGRVE--DCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLV 550
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 235/403 (58%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G +++++ ++++ + + + + L++AC L++ K +H R
Sbjct: 513 ISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGF 572
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + V+T ++ MYS+ S+ +A VF + + L SW+ MI GFA GLG++A+ +F
Sbjct: 573 IEDVFVAT--ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 630
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++ ++ G+ PD F + SAC G + EG +F+SM DY IVP ++HY +VD+LG
Sbjct: 631 NEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGR 690
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-SRLNEKSK 618
GYLDEA + I MP++PD +W L+ CR+H NL+ + A+ + +L+P + N
Sbjct: 691 AGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILM 750
Query: 619 AGLVPV--------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
L + + EL + + +++ +VH + + + HP+ KIY +
Sbjct: 751 MNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFEL 810
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++MK+ GY+P+ V ++D+ K++ LL+H+E+LA+++GL+ A PIR++KN
Sbjct: 811 YQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNT 870
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCHSA K IS + REL +RD RFHHF++G CSC D+W
Sbjct: 871 RICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+++ +E+ ++ + + T +++QACG AL AK +H +V R VS N
Sbjct: 214 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 273
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MYS+ ++ A VF +M R+ +SW++MI+ +A G DA +F + + + +KP
Sbjct: 274 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
D + + S L E +L+ + G P+ S++ + G+L+
Sbjct: 334 DIVTWNCLLSG-HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 387
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G G +E + +L ++ + + + + ++QA + L K H +V R
Sbjct: 342 LSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF 401
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MY + S+ A +VF NM R++ +W+++++G++ G+ EDA+ + +Q
Sbjct: 402 DCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQ 461
Query: 502 FKQAGLKPDDQIFIGVFS--ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++ G+KPD + G+ S A G +LH +K G+ P++ + +++
Sbjct: 462 MEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLH---QTKSLGLTPNVVSWTALISGSSQ 518
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI---------VEQ--L 608
G ++L+F +M E + + L R +L L + EI +E +
Sbjct: 519 AGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFV 578
Query: 609 DPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL 644
+ ++ SK+ + NA ++ + +NK LAS N +
Sbjct: 579 ATALIDMYSKSSSLK-NAHKVFRRIQNKTLASWNCM 613
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 233/413 (56%), Gaps = 28/413 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+D V+ G+ EA+ V + ++ D+ +++AC A+E + VH ++E
Sbjct: 182 MVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLE--- 238
Query: 441 SPLRVSTYNG----------ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
++ G ++ MY +C M+DA+ VF + RD+ W+ MI G A NG
Sbjct: 239 ----TGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG 294
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY 550
GE A+++F + Q G P++ FI V AC+ G V EG F+SM +DYGI P +HY
Sbjct: 295 YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM-QDYGIKPQREHY 353
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP 610
+ D+LG G ++EA + MPMEP W LM+ C+MH ++ +G+R + + +L+P
Sbjct: 354 GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEP 413
Query: 611 SRLNEKSKA-GLVPVNAS--------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHP 661
L VN ++ +++ KK + +E+ VHE+ +GDT HP
Sbjct: 414 YDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHP 473
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDID-QEGKEEALLAHSERLAVSHGLLSSPA 720
T KIYAL+ + +++ GY+ +T V+ D+D +E K AL HSERLA++ G+L+ P
Sbjct: 474 LTRKIYALLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQ 533
Query: 721 RAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIRI+KNLRVC DCH K++SK+ RE+I+RD RFH F+DG+CSC DYW
Sbjct: 534 GVPIRIVKNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW 586
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ L V ++N ++ Y + + A VF+ M ER+L SW M+ + G +A+ +F
Sbjct: 141 AALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFD 200
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLG 558
+ + +PD + + V AC+ LG V G +H + + G ++ ++VDM
Sbjct: 201 RMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYC 260
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G +++A + + + DV +W ++ M+G G+R E+ ++
Sbjct: 261 KCGCMEDAWQVFDGVHRR-DVVLWNAMIGGLAMNGY---GERALELFRRM 306
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 231/379 (60%), Gaps = 23/379 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ L S LR S ++ MY++C ++ A
Sbjct: 338 TMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS----LIDMYAKCGDIEAAQ 393
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF +M R L+SW+ MI GFA +G A DIFS+ ++ G++PDD F+G+ SACS G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F SM++DY ++P ++HY ++D+ G +G EA + I M MEPD +W L
Sbjct: 454 MLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSL 513
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAK------EKE 634
+ C+MHGN+ELG+ A+ + +++P N S L + A+ E+AK +K
Sbjct: 514 LKACKMHGNVELGESYAQNLIKIEPE--NPGSYVLLSNIYATAERWNEVAKTRALLNDKG 571
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
KK+ + +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL +++
Sbjct: 572 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEME 631
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I R
Sbjct: 632 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 691
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHF+DG CSC DYW
Sbjct: 692 DRTRFHHFRDGECSCNDYW 710
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G KEA+E+ + K + D T ++ AC + ++E + VH +
Sbjct: 207 ISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGF 266
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ +YS+C ++ A +F ++ +D+ SW+T+I G+ L ++A+ +F
Sbjct: 267 GXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQD 326
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G KP+D + + SAC+ LG + G +H + G+ + S++DM
Sbjct: 327 MLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 386
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + + M + + W ++ MHG
Sbjct: 387 GDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHG 418
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L K KE ++ G + K +DL + L+ LE+A+ V + S
Sbjct: 110 LKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKS----S 165
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V +Y ++ Y+ ++ A +F + +D+ SW+ I+G+A+ G ++A+++F +
Sbjct: 166 HRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++PD+ + V SAC+ G + G S D+G ++K +++D+ G
Sbjct: 226 MMKTNVRPDESTMVTVLSACAQSGSIELGR-QVHSWINDHGFGXNLKIVNALIDLYSKCG 284
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
L+ A + + DV W L+
Sbjct: 285 ELETACGLFQGLS-NKDVISWNTLI 308
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC------DSMDDA 464
P+ S L+ C K L+ + +H + + + L + Y + K+ C D + A
Sbjct: 4 PSLS-LLHXC---KTLQSLRIIHAQMIK--TGLHNTNY-ALSKLLEXCVLSPHFDGLPYA 56
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
SVF + E L W+TM G A + A+ ++ GL P+ F + +C+
Sbjct: 57 ISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKS 116
Query: 525 GDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
EG LH + + +G + + S++ M G L++A + +K
Sbjct: 117 XAFKEGQQLHGQVLK--FGFDLDLYIHTSLISMYVQNGRLEDAQKVXDK 163
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 232/405 (57%), Gaps = 30/405 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK EA V + ++ + + P S ++ AC + A + VH
Sbjct: 277 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG------ 330
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ MY++C + A +FS M RD+ SW ++I G A++G E A+ ++
Sbjct: 331 --------NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 382
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+KP++ F+G+ ACS +G V +G F+SM+KDYGI PS++HY ++D+LG +
Sbjct: 383 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 442
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEA I MP PD W L++ C+ G ++G R A+ + +L + S
Sbjct: 443 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD--HLVSSFKLKDPSTYI 500
Query: 621 L---VPVNASELAK---------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + +AS K E E +K + +EVR + + AG+TSHP + I+
Sbjct: 501 LLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFR 560
Query: 669 LIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
L++ L +M+ GY+P+T ++LHD+D++ KE+ L HSER AV++GLL + PIRI+
Sbjct: 561 LLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIV 620
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
KNLRVCGDCH LK IS+I RE+I+RDA R+HHFK G CSC D+
Sbjct: 621 KNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDF 665
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ L AKA+H H+ +L N ++ +Y +C + A VF M RD +W +++
Sbjct: 85 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 144
Query: 484 TGFAKNGL-GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY 541
T + L G+ S +GL+PDD +F + AC+ LG + G +H + +Y
Sbjct: 145 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 204
Query: 542 G---IVPSMKHYVSIVDMLGSTGYLDEA 566
+V S S+VDM G L+ A
Sbjct: 205 ANDEVVKS-----SLVDMYAKCGLLNSA 227
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-------NGILKMYSECDSMDDA 464
FS L++AC + +++ + VH H VS Y + ++ MY++C ++ A
Sbjct: 175 VFSALVKACANLGSIDHGRQVHCH-------FIVSEYANDEVVKSSLVDMYAKCGLLNSA 227
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+VF ++ ++ SW M++G+AK+G E+A+++F
Sbjct: 228 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 262
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 218/374 (58%), Gaps = 15/374 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + ++ AC ALE + +H H+ R L N ++ MY +C ++ A +F +
Sbjct: 454 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 513
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+DL SW MI G+ +G G +A+ F++ + +G++PD+ FI + ACS G + EG
Sbjct: 514 PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGW 573
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F M + I P +HY IVD+L G L +A +FI+ MP+EPD +W L+ CR+
Sbjct: 574 GFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRI 633
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ---------- 641
+ +++L ++ AE V +L+P N L + A E K +E KKL +
Sbjct: 634 YHDVKLAEKVAEHVFELEPE--NTGYYVLLANIYA-EAEKWEEVKKLRERIGRRGLRKNP 690
Query: 642 --NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +E++ KVH + GD+SHP +KI L++ R +MKE G+ P+ R+ L D KE
Sbjct: 691 GCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKE 750
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
AL HSE++A++ G+LS P +R+ KNLRVCGDCH K +SK+V R++I+RD+ RF
Sbjct: 751 MALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRF 810
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG CSCR +W
Sbjct: 811 HHFKDGSCSCRGHW 824
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 13/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--R 438
+ G +EG ++ + +EK+ IS D+ T + ++ AC LE K VH +++ +
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ S L VS N ++ MY++C SM DA SVFS M +D+ SW+TMI G++KN L +A+++
Sbjct: 383 MQSDLFVS--NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNL 440
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVD 555
F + Q KP+ + AC++L + G +H + + S+ +V ++VD
Sbjct: 441 FVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGF----SLDRHVANALVD 495
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L A + +P E D+ W ++ MHG
Sbjct: 496 MYLKCGALGLARLLFDMIP-EKDLVSWTVMIAGYGMHG 532
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G ++ +++ + I+ DL T ++ C + L +A+H + +
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ N +L MYS+ +++ A VF M ER + SW +MI G+A+ GL + +V +F
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALG 525
+ ++ G+ PD + AC+ G
Sbjct: 342 EMEKEGISPDIFTITTILHACACTG 366
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 55/248 (22%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE----------- 437
G ++ A+E++ K ++L T+ ++Q C D K++++ + +H ++
Sbjct: 82 GNLRRAMELINQSPKP--DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 438 -----------------RLLSPL---RVSTYNGILKMYSECDSMDDAFSVFSNMTE---- 473
R+ + +V +N ++ Y++ + ++ S+F M E
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 474 --------------RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
RD+ SW++MI+G+ NGL E +D+F Q G+ D + V +
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 520 ACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
CS G ++ G LH ++ +G ++ + ++DM +G L+ A++ E M E
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQVFETMG-ERS 316
Query: 579 VDVWEKLM 586
V W ++
Sbjct: 317 VVSWTSMI 324
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 227/399 (56%), Gaps = 9/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G ++G+ ++A++ ++++ + + T + + C L+ + +H +
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ + ++ MY++C ++DA VF + RD SW+T+I G++++G G A+ F
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G PD+ FIGV SACS +G + EG HF S+SK YGI P+++HY +VD+LG G
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEK 616
E FIE+M + +V +WE ++ C+MHGN+E G+R A + +L+P N
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605
Query: 617 SKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ G+ N L + KK + +EV +VH + + D SHP+ +I+ ++ L
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 665
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++ GY P T VLH++ K+E L HSERLA++ LLS+ R IRI KNLR+CG
Sbjct: 666 QKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICG 725
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH +K IS+I +EL++RD FHHFK+G CSC+++W
Sbjct: 726 DCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
++ TF +++ C L E KA+H V + +N ++ +Y++C S + A VF
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
+ ERD+ SW +ITGF G G + IF+Q G P+ FI + +CS+L DV
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 307
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V EG + + + + + ++ TF ++++C ++ K VH + + +
Sbjct: 264 ITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK--N 320
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + + G ++ MY++ ++DA ++F+ + +RDL +W ++ G+A++G GE AV F
Sbjct: 321 SLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCF 380
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q ++ G+KP++ S CS + + G SM+ G M ++VDM
Sbjct: 381 IQMQREGVKPNEFTLASSLSGCSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAK 439
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +++A E + + D W ++ HG
Sbjct: 440 CGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHG 472
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
++EA+++ L+ I ++ F+ L+ A +++H V + + N
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+ MY + S+++ + F M +L S + +++GF + I Q G +P+
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPN 190
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
FI + C++ GD+ EG +H + + GI P + S+V++ G + A +
Sbjct: 191 MYTFISILKTCASKGDLNEGKAIHGQVIKS--GINPDSHLWNSLVNVYAKCGSANYACKV 248
Query: 570 IEKMPMEPDVDVWEKLMN 587
++P E DV W L+
Sbjct: 249 FGEIP-ERDVVSWTALIT 265
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 229/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK G+ +A+EV + I + + + AC A L + VH VE+
Sbjct: 198 MISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGVLARGREVHRWVEQSG 257
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY +C S+++A+ VF + + LTSW+ MI G A +G +DA+++F
Sbjct: 258 ITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGGLAVHGRCKDAIELFH 317
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ + PDD + V +AC+ G V +G +F + + YGI P M+HY +VD+ G
Sbjct: 318 EMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRA 377
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G LDEA + I+ MPMEPD+ V L C++H +L+LG+ V +LDP
Sbjct: 378 GLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLA 437
Query: 614 NEKSKAG--LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + AG + L E+ K A ++++E+ +V E++ G H + +I+A ++
Sbjct: 438 NLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVK 497
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ +++ GY+P+T VLHDI +E KE L HSE+LA++ GLL + +RI KNLR
Sbjct: 498 DMMRKIRLEGYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLR 557
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH A K IS++ RE+++RD RFHHFKDG CSCRDYW
Sbjct: 558 VCRDCHEATKFISRVFEREIVVRDRNRFHHFKDGTCSCRDYW 599
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L V ++ ++ +DDA +F M ER+L SW+ MI+G+ K G DA+++F Q
Sbjct: 159 LDVVSWTTMVGGLCRLGLVDDARKLFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQM 218
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G++ + + AC+ G + G + GI K ++VDM G
Sbjct: 219 RALGIEGNGFVAASAVVACTGAGVLARGR-EVHRWVEQSGITMDEKLATAVVDMYCKCGS 277
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
++EA + +P + + W ++ +HG RC + +E
Sbjct: 278 VEEAWHVFKVLPTK-GLTSWNCMIGGLAVHG------RCKDAIE 314
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 236/400 (59%), Gaps = 26/400 (6%)
Query: 396 EVLGLLEKQC---ISVDLPTFSQLMQACGDAKALEEAKAVHE--HVERLLSPLRVSTYNG 450
E L + E+ C I D+ T ++ AC + L++AK VH H+ L S L + N
Sbjct: 330 EALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPID--NA 387
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C +D A VF M R++ SW +MI FA +G D++ +F+Q KQ ++P+
Sbjct: 388 LINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPN 447
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ F+GV CS G V EG F SM+ +Y I P ++HY +VD+ G L EALE I
Sbjct: 448 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVI 507
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-- 628
E MPM P+V +W LM+ CR+HG LELG+ A+ + +L+P ++ + + + A E
Sbjct: 508 ESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPD--HDGALVLMSNIYAREYR 565
Query: 629 ---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+ ++K+ K + +++ K HE+ GD H ++++IY + + +++K
Sbjct: 566 WDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKL 625
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR------APIRIMKNLRVC 733
AGY+P+ VL D+++E K++ +L HSE+LA+ GL++ IRI+KNLRVC
Sbjct: 626 AGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVC 685
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ K++SK+ E+I+RD RFH +KDGLCSCRDYW
Sbjct: 686 EDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D +F +++A AL E +H ++ + G++ MY+ C ++ A +VF
Sbjct: 113 DRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVF 172
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M++RD+ +W+TMI + + GL ++A +F + K + + PD+ I + SAC G+
Sbjct: 173 DEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN-- 230
Query: 529 EGMLHFESMSKDYGIVPSMKH----YVSIVDMLGSTGYLDEALEFIEKM 573
+ + D+ I ++ ++V M G +D A+EF KM
Sbjct: 231 ---MRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKM 276
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L VST ++ YS+ +DDA +F +DL W TMI+ +A++ ++A+ +F +
Sbjct: 281 LFVST--AMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEM 338
Query: 503 KQAGLKPDDQIFIGVFSACSALG--DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+G+KPD + V SAC LG D + + + ++ ++P ++++M
Sbjct: 339 CCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDN---ALINMYAKC 395
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G LD A + EKMP +V W ++N MHG
Sbjct: 396 GGLDAARDVFEKMPTR-NVVSWSSMINAFAMHG 427
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 225/402 (55%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G +E + + ++ I+ + T + ++ AC L H +
Sbjct: 398 ISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGF 457
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ MY++C +D A VF M +R + SW+TMI + +G+G +A+ +F
Sbjct: 458 TADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDN 517
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ GLKPDD FI + SACS G V EG F +M++D+GI+P M+HY +VD+L G
Sbjct: 518 MQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAG 577
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
E FIEKMP+EPDV VW L++ CR++ N+ELG+ ++ +++L P N
Sbjct: 578 LFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSN 637
Query: 615 EKSKAGLVPVNASELAKEKEN--KKLASQNLLEVRSKVHEYRAGD-TSHPETDKIYALIR 671
S G A +KE +K + +E+ VH + G SHP+ +I +
Sbjct: 638 MYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLD 697
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +MK GY E+ +V D+++E KE LL HSE+LA++ G+LS I + KNLR
Sbjct: 698 ELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLR 757
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A+K IS + R++ +RDA RFHHFKDG+C+C D+W
Sbjct: 758 VCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 391 VKEAIEV---LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
++EA+E+ L +L+ I + T + +++ C + L +H + + L +
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N +L MY++C ++ A F+ M RD S+ +I+G+ +NG E+ + +F + + +G+
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI----VDMLGSTGYL 563
P+ V AC+ L LH+ S S Y I+ I +DM G +
Sbjct: 423 NPEKATLASVLPACAHLAG-----LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKI 477
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
D A + ++M V W ++ +HG
Sbjct: 478 DTARKVFDRMHKRGIVS-WNTMIIAYGIHG 506
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 20/232 (8%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST-------YNGILKMYSECDS 460
+ L + L+++C +K+L K +H+H+ + L + + ++ +Y C
Sbjct: 7 LSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSE 66
Query: 461 MDDAFSVFSNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ A VF M R ++ W+ +I +A NG E+A+D++ + G+ P+ F V
Sbjct: 67 LKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVL 126
Query: 519 SACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
ACSAL + EG +H + K + ++ ++VD G LD+A E +KM +
Sbjct: 127 KACSALKEASEGREIHCD--IKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH-KR 183
Query: 578 DVDVWEKLMNLCRMH-GNLELGDRCAEIVEQL--DPSRLNEKSKAGLVPVNA 626
DV W +++ +H G+ D A ++ Q+ D S N + G++P A
Sbjct: 184 DVVAWNSMISGFSLHEGSY---DEVARLLVQMQNDVSP-NSSTIVGVLPAVA 231
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 7/242 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EAI++ + I+ + TF +++AC K E + +H ++RL V
Sbjct: 98 GPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVS 157
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ Y++C +DDA VF M +RD+ +W++MI+GF+ + D V Q +
Sbjct: 158 TALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVS 217
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+ +GV A + + + G G V + I+D+ G +D A
Sbjct: 218 PNSSTIVGVLPAVAQVNSLRHGK-EIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARR 276
Query: 569 FIEKMPMEPDVDVWEKLMN---LCR-MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
+ M + + W ++ +C M LEL C ++ + D L+ + A ++ V
Sbjct: 277 IFDMMGIVKNEVTWSAMVGAYVVCDFMREALEL--FCQLLMLKDDVIVLSAVTLATVIRV 334
Query: 625 NA 626
A
Sbjct: 335 CA 336
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 234/400 (58%), Gaps = 21/400 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
GK EA+E+ ++ + + + T L+ ACG+ AL KA H LR +
Sbjct: 323 GKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH------CFSLRNGIF 376
Query: 449 N------GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
N ++ MY++C M + F M R+L SW++++ G+A +G +A++IF
Sbjct: 377 NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELM 436
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++ G KPD F V SAC+ G EG +F+SMS+++G+ M+HY +V +LG +G
Sbjct: 437 QRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE------- 615
L+EA I++MP EPD VW L++ CR+H ++LG+ A+ V +L+P
Sbjct: 497 LEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNI 556
Query: 616 -KSKAGLVPVN-ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
SKA V V+ ++ + + KK + +E+++KVH AGD+SHP+ +I + L
Sbjct: 557 YASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKL 616
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+MK++GY+P T FVL D++++ KE+ L HSE+LAV GLL++ P++++KNLR+C
Sbjct: 617 TVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRIC 676
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ +K IS RE+ +RD RFH FK G+CSC DYW
Sbjct: 677 RDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERL 439
+ G + G +A+ + + + + D + S ++ A GD +H +V ++
Sbjct: 181 MISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQG 240
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L P + + ++ MY +C + VF+ M E D+ + + ++TG ++NGL ++A+++F
Sbjct: 241 LGPDKF-VVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVF 299
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
QFK G+ + + + ++CS G +E + F M + G+ P + V+I +L +
Sbjct: 300 KQFK--GMDLNVVSWTSMIASCSQNGKDMEALELFREMQIE-GVKP---NSVTIPCLLPA 353
Query: 560 TGYLDEAL 567
G + L
Sbjct: 354 CGNIAALL 361
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST--YNGI 451
I V + Q I D +++ C AL+ K +H L+S L + + + +
Sbjct: 58 VIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFA--LVSGLGLDSVVLSSL 115
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L MY + D + DA +VF + + + + +I+ FA+ G ++ ++F Q + G++ +
Sbjct: 116 LHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNL 175
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE--- 568
+ G+ S + G ++ +L F++M + G+ P S+ +L + G LD L
Sbjct: 176 VSWNGMISGFNRSGSYLDAVLMFQNMHLE-GLKPD---GTSVSSVLPAVGDLDMPLMGIQ 231
Query: 569 ---FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
++ K + PD V L++ M+G + + ++D
Sbjct: 232 IHCYVIKQGLGPDKFVVSALID---MYGKCACASEMSGVFNEMD 272
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 15/218 (6%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
I++ + KQ + D S L+ G E V ++ + V N ++
Sbjct: 230 IQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEV----DVGACNALVTG 285
Query: 455 YSECDSMDDAFSVFSNMTERDL--TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
S +D+A VF DL SW +MI ++NG +A+++F + + G+KP+
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ AC + ++ G S GI + +++DM G + + +
Sbjct: 346 TIPCLLPACGNIAALLHGKAA-HCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDM 404
Query: 573 MPMEPDVDVWEKLMNLCRMHGN-------LELGDRCAE 603
MP V W LM MHG EL RC +
Sbjct: 405 MPNRNLVS-WNSLMAGYAMHGKTFEAINIFELMQRCGQ 441
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 234/398 (58%), Gaps = 11/398 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ + EA+ + ++ + ++ T ++ AC AL+ + +H++V +L V
Sbjct: 210 VRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSLV 269
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ MY++C S++DA +VF M RD +W MI +A +G G +A+ +F + K+
Sbjct: 270 KVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQ 329
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+KPDD F+G+ ACS G V EG+ +F+ M KD+GIVP +KHY + D+L +G L+
Sbjct: 330 GMKPDDITFLGLLYACSHSGLVSEGLRYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLER 388
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A +FI+++P+ P +W L++ C HG++ELG R E + +LD S + + N
Sbjct: 389 AYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCAN 448
Query: 626 ---------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+L +K K+ + +E+ + VHE+ AGD HP++ + ++ + Q
Sbjct: 449 TGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQ 508
Query: 677 MKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K GYIP+T V H ++ +E K +L HSE+LA++ GLL++ A +R++KNLRVC D
Sbjct: 509 LKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPD 568
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHS K +S + R +I+RD RFHHF+ G+CSC DYW
Sbjct: 569 CHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ V + ++ ++ D TF L++AC A+A E + H +L + ++ M
Sbjct: 118 VRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINM 177
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y+EC A F + S++ MI ++ +A+ +F + + GL P
Sbjct: 178 YAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTV 237
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
I V SAC+ LG + G + + K G+ +K ++VDM G L++A+ + M
Sbjct: 238 ISVLSACALLGALQLGRWLHDYVRK-LGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGME 296
Query: 575 MEPDVDVWEKLMNLCRMHG 593
D W ++ HG
Sbjct: 297 SR-DRQAWSVMIVAYANHG 314
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 244/442 (55%), Gaps = 32/442 (7%)
Query: 348 QNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
+NG++ A +V H +D + ++ + G + G+ EA+ + ++
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSA----------MISGFAQNGQSDEALRLFRNMQASG 305
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL-----KMYSECDS 460
I D + AC + L+ ++VH + R +N IL MYS+C S
Sbjct: 306 IQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD------FNCILGTAAIDMYSKCGS 359
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F+ +++RDL W+ MI +G G+DA+ +F + + G++PD F + SA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
S G V EG L F M + I P+ KHYV +VD+L +G ++EA + + M EP V
Sbjct: 420 LSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVA 479
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAK 631
+W L++ C + LELG+ A+ + +L P S L +K +L K
Sbjct: 480 IWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMK 539
Query: 632 EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
+ +KK+ + +E+R H + D SHP+ ++I + + L +M++ GYIP T FV H
Sbjct: 540 DSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYH 599
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGREL 751
D+++E KE+ L HSERLA++ GLL++ + I+KNLRVCGDCH A+K ISKI RE+
Sbjct: 600 DLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREI 659
Query: 752 IIRDAKRFHHFKDGLCSCRDYW 773
++RDAKRFHHFKDG+CSCRDYW
Sbjct: 660 VVRDAKRFHHFKDGVCSCRDYW 681
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V G+ +AI++ + + + D ++QAC A+ + +VH H+ R +
Sbjct: 183 GFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRM 242
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V T ++ MY++ +D A VF M R+ SW MI+GFA+NG ++A+ +F +
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LH-FESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++PD + ACS +G + G +H F D+ + + +DM G
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILG----TAAIDMYSKCG 358
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
L A + + M + D+ +W ++ C HG
Sbjct: 359 SLASA-QMLFNMISDRDLILWNAMIACCGAHGR 390
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ + AC L ++V + V + +L +Y+ +M DA VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA----- 523
M RD +W TM+ GF G DA+ ++ + ++ G+K D+ + IGV AC+A
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+G V G L M D +V + S+VDM G LD A M DV W
Sbjct: 227 MGASVHGHLLRHGMRMD--VVTA----TSLVDMYAKNGLLDVACRVFGLMVHRNDVS-WS 279
Query: 584 KLMN 587
+++
Sbjct: 280 AMIS 283
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 213/373 (57%), Gaps = 11/373 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + ALE + +H+ + L S + MY++C S+ +A F +
Sbjct: 243 TIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMI 302
Query: 472 TE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ ++L +W+TMIT +A +G G +AV IF +AG++PD F+G+ S CS G +
Sbjct: 303 AQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDA 362
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ HF M + + P ++HY +VD+LG G L EA E I +MPM+ VW L+ C
Sbjct: 363 GLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAAC 422
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENKKLAS 640
R H NLE+ + A + L+P N ++AG+ L K + KK
Sbjct: 423 RSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPG 482
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ K H + D SHP+ +IY + L ++K AGYIP+T FVLHDI +E KE
Sbjct: 483 CSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEY 542
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ GLL++ +R+ KNLR+CGDCH+A K ISKI RE+I+RD RFH
Sbjct: 543 NLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFH 602
Query: 761 HFKDGLCSCRDYW 773
FKDG CSC DYW
Sbjct: 603 CFKDGSCSCGDYW 615
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
GDA+ L + V + ++++N ++ Y + + A +F M R++ SW
Sbjct: 159 GDARKLFDKMIVRD----------MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWT 208
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAG--LKPDDQIFIGVFSACS 522
MI+G+ +NG E A+ +F + Q G +KP+ + V AC+
Sbjct: 209 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACA 252
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 225/403 (55%), Gaps = 11/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G + G V+EA+ + + + + TFS L+ A G+ L K +H ++ R
Sbjct: 242 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY +C ++D A VF+ + D+ SW MI G+A +G +A +F
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +KP+ F+ V +ACS G V G +F SMS YG VPS++H ++ D LG
Sbjct: 362 RMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 421
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G LDEA FI +M ++P VW L+ CR+H N L + A+ + +L+P +
Sbjct: 422 GDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILS 481
Query: 614 NEKSKAGLVPVNASELAKE---KENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N S +G A++L K K KK + + +EV++K+H + A D SHP D+I +
Sbjct: 482 NMYSASGRWN-EAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDAL 540
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
QM GY+P VL DI++E K E L HSE+LA+ G++S+P IR+MKNL
Sbjct: 541 NVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNL 600
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH A K ISKIV RE+++RD RFH FKDG CSC D+W
Sbjct: 601 RVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S LP F++ C D K VH + + V + ++ MY+ C MD +
Sbjct: 173 LSTVLPIFAE----CADIK---RGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSM 225
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF + ++ D W++M+ G+A+NG E+A+ IF + QAG++P F + A L
Sbjct: 226 KVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLS 285
Query: 526 DVVEG-MLH---FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+ G LH + D + S S++DM G +D A + PD+
Sbjct: 286 LLRLGKQLHAYLIRARFNDNIFISS-----SLIDMYCKCGNVDIARRVFNGI-QSPDIVS 339
Query: 582 WEKLMNLCRMHG 593
W ++ +HG
Sbjct: 340 WTAMIMGYALHG 351
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M ERD SW+T+I G A++ ++A+ + + + G PD V + D
Sbjct: 126 VFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECAD 185
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ GM+ Y I + V S++DM + +D +++ + + D +W
Sbjct: 186 IKRGMV-----VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS-DCDAVLW 239
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
++ +G++E E L R ++ VPV S L N +
Sbjct: 240 NSMLAGYAQNGSVE---------EALGIFRRMLQAGVRPVPVTFSSLIPAFGN-----LS 285
Query: 643 LLEVRSKVHEY 653
LL + ++H Y
Sbjct: 286 LLRLGKQLHAY 296
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 227/399 (56%), Gaps = 9/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G ++G+ ++A++ ++++ + + T + + C L+ + +H +
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 666
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ + ++ MY++C ++DA VF + RD SW+T+I G++++G G A+ F
Sbjct: 667 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 726
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G PD+ FIGV SACS +G + EG HF S+SK YGI P+++HY +VD+LG G
Sbjct: 727 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 786
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEK 616
E FIE+M + +V +WE ++ C+MHGN+E G+R A + +L+P N
Sbjct: 787 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 846
Query: 617 SKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ G+ N L + KK + +EV +VH + + D SHP+ +I+ ++ L
Sbjct: 847 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 906
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++ GY P T VLH++ K+E L HSERLA++ LLS+ R IRI KNLR+CG
Sbjct: 907 QKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICG 966
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH +K IS+I +EL++RD FHHFK+G CSC+++W
Sbjct: 967 DCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L +S +++ C L E KA+H V + +N ++ +Y++C S + A VF
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ ERD+ SW +ITGF G G AV++F + ++ G++ ++ + ACS D+
Sbjct: 188 EIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEF 247
Query: 530 G-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW------ 582
G +H E++ G + ++VD+ G + A MP + V W
Sbjct: 248 GKQVHAEAIK--VGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVS-WNALLNG 304
Query: 583 -------EKLMNL-CRMHGN 594
EK++NL CRM G+
Sbjct: 305 FAQMGDAEKVLNLFCRMTGS 324
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFS 466
++ TF ++++C ++ K VH + + + L + + G ++ MY++ ++DA +
Sbjct: 531 NMYTFISILRSCSSLSDVDLGKQVHAQIVK--NSLDGNDFVGTALVDMYAKNRFLEDAET 588
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F+ + +RDL +W ++ G+A++G GE AV F Q ++ G+KP++ S CS +
Sbjct: 589 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 648
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G SM+ G M ++VDM G +++A E + + D W ++
Sbjct: 649 LDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTII 706
Query: 587 NLCRMHG 593
HG
Sbjct: 707 CGYSQHG 713
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L ++G+ +EA EV + + + T + L+ A D L +++H V +
Sbjct: 406 LDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYD 465
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ N ++ MY + S+ D VF T RDL SW+ +++GF N + + IF+Q
Sbjct: 466 NTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLA 525
Query: 505 AGLKPDDQIFIGVFSACSALGDV 527
G P+ FI + +CS+L DV
Sbjct: 526 EGFNPNMYTFISILRSCSSLSDV 548
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L+G + G ++ + + + I+ T S +++ C ++ L + VH R+
Sbjct: 302 LNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGC 361
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L ++ MYS+C DA VF + + D+ SW +IT + G +A ++F +
Sbjct: 362 ELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKR 421
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ +G+ P+ + SA + LGD+ G
Sbjct: 422 MRHSGVIPNQFTLASLVSAATDLGDLYYG 450
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-- 439
+ G V EG A+ + + ++ + + T++ ++AC LE K VH ++
Sbjct: 201 ITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGD 260
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S L V + ++ +Y++C M A VF M +++ SW+ ++ GFA+ G E +++F
Sbjct: 261 FSDLFVGS--ALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLF 318
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDML 557
+ + + V C+ G++ G + S++ G + ++S +VDM
Sbjct: 319 CRMTGSEINFSKFTLSTVLKGCANSGNLRAGQI-VHSLAIRIGC--ELDEFISCCLVDMY 375
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +AL+ ++ +PDV W ++
Sbjct: 376 SKCGLAGDALKVFVRIE-DPDVVSWSAIIT 404
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 226/398 (56%), Gaps = 12/398 (3%)
Query: 387 KEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G EA EV L++ + ++ + T S ++ A + AL K +H+ V R+ V
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
I+ MY +C ++ A F M +++ SW MI G+ +G A+++F +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++P+ F+ V +ACS G VEG F +M +G+ P ++HY +VD+LG G+L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I++M M+PD +W L+ CR+H N+EL + + +LD S + +
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 626 ASELAKEKENKKLASQN----------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
A K+ E ++ +N LLE+ +VH + GD HP+ +KIY + L
Sbjct: 503 AGRW-KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++ EAGY+ T V HD+D+E KE L HSE+LA++ G++++ + + ++KNLRVC D
Sbjct: 562 KLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSD 621
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K+ISKIV RE ++RDAKRFHHFKDG CSC DYW
Sbjct: 622 CHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ + K + +F ++AC + K H+
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MYS C ++DA VF + +R++ SW +MI G+ NG DAV +F
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 505 AGLKPDDQIF------IGVFSACS 522
DD +F + V SACS
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACS 194
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 254/444 (57%), Gaps = 23/444 (5%)
Query: 346 NIQNGMMASQVLNNCKHEDDFAEA-------SRSSQNNGTLEQLDGLVKEGKVKEAIEVL 398
N+ N ++ + CK D A+ +R S N L G + G ++A+ +
Sbjct: 464 NVMNALI--TMYCKCKRTDLAAQVFDELGYKTRVSWNAMIL----GCTQNGSSEDAVRLF 517
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
++ + + D T ++ A D +A+ +H + RL V ++ MY++C
Sbjct: 518 SRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 577
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ A S+F++ +R + +W+ MI G+ +G G+ AV++F + K +G P++ F+ V
Sbjct: 578 GRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVL 637
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
SACS G V EG +F SM +DYG+ P M+HY ++VD+LG G L EA FI+KMPMEP
Sbjct: 638 SACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPG 697
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--------ELA 630
+ V+ ++ C++H N+EL + A+ + +L+P + NAS A
Sbjct: 698 ISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTA 757
Query: 631 KEKEN-KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
EK+ +K +++++++++H + +G T+H + IYA + L ++K GY+P+T +
Sbjct: 758 MEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI 817
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
HD++ + K + L HSE+LA+++GL+ + I+I KNLRVC DCH+A K+IS + GR
Sbjct: 818 -HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGR 876
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E+I+RD +RFHHFKDG CSC DYW
Sbjct: 877 EIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EA+ + + + + V + + ACG+ L+E + VHE + R+
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V+ N ++ MY +C D A VF + + SW+ MI G +NG EDAV +FS
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ + +KPD + + A + + D ++
Sbjct: 519 RMQLENVKPDSFTLVSIIPALADISDPLQA 548
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T ++ AC DA+AL + VH R +V+ IL +Y +C ++D A VF
Sbjct: 326 DAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVF 385
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M +R+ SW+ MI G+A+NG +A+ +F + G+ D + AC LG +
Sbjct: 386 DGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLD 445
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG E + + G+ ++ +++ M D A + +++ + V W ++
Sbjct: 446 EGRRVHELLVR-IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS-WNAMILG 503
Query: 589 CRMHGNLE 596
C +G+ E
Sbjct: 504 CTQNGSSE 511
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVE-RLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
L TF+ L++ C L +AVH + R LSP ++ + MY++C DA VF
Sbjct: 225 LRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAA-TALANMYAKCRRPGDARRVF 283
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACS---AL 524
M RD +W+ ++ G+A+NGL E AV + + ++ G +PD + V AC+ AL
Sbjct: 284 DRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQAL 343
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
G E + + G + +I+D+ G +D A + + M
Sbjct: 344 GACRE----VHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM 388
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 227/401 (56%), Gaps = 21/401 (5%)
Query: 392 KEAIEVLGLLEKQ------CISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPL 443
K +VL L +K C+ D T +QAC + AL+ K VH+ ++ L L
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 252
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+S N ++ MYS C SMD A+ VF M ER++ SW +I+G A NG G++A++ F++
Sbjct: 253 NLS--NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM-SKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G+ P++Q G+ SACS G V EGM+ F+ M S ++ I P++ HY +VD+LG
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNE 615
LD+A I+ M M+PD +W L+ CR+HG++ELG+R + +L LN
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 616 KSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
S G L KEK + +E++ VHE+ D SHP ++IY ++ +
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Query: 674 RAQMKEAGYIPETRFVLHDID-QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
Q+K AGY+ E LH+++ +E K AL HSE+LA++ G+L +P IR+ KNLR
Sbjct: 491 NQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRT 550
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ K +S + R +I+RD RFHHFK G CSC D+W
Sbjct: 551 CVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK---QAGL 507
++ +YS C++ DA VF + +RD SW+ + + + +N D + +F + K +
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV 213
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY----GIVPSMKHYVSIVDMLGSTGYL 563
KPD + AC+ L G L F D+ G+ ++ ++V M G +
Sbjct: 214 KPDGVTCLLALQACANL-----GALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
D+A + M E +V W L++ M+G
Sbjct: 269 DKAYQVFYGMR-ERNVVSWTALISGLAMNG 297
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 274/504 (54%), Gaps = 27/504 (5%)
Query: 294 ALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQN-GMM 352
AL+ Y+ + Q + + + N W+ Y QN +Q+ G+M
Sbjct: 195 ALTNMYAKCGALDQ-ARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLM 253
Query: 353 ASQV-LNN-------CKHEDDFAEASRSSQNNGTL---EQLDGLVKEGKVKEAIEVLGLL 401
QV ++N C + D+ + R + + + G + GK ++A+ + +
Sbjct: 254 PDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREM 313
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
+ + D T S ++ +C +L + +AVH + + ++ MYS+C
Sbjct: 314 LLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGET 373
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
DA+ VF M R++ SW++MI G+A+NG +A+ ++ + LKPD+ F+GV SAC
Sbjct: 374 ADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC 433
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
G V G +F S+SK +G+ P+ HY ++++LG GY+D+A++ I+ M EP+ +
Sbjct: 434 MHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLI 493
Query: 582 WEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELA 630
W L+++CR++ ++ G+ A + +LDP N L + A+ L
Sbjct: 494 WSTLLSVCRINCDVNNGEMAARHLFELDPH--NAGPYIMLSNIYAACGRWKDVAAVRSLM 551
Query: 631 KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
K + KK A+ + +E+ ++VH++ A D +H ET++IY + L +++E+G+ P+T VL
Sbjct: 552 KNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVL 611
Query: 691 HDIDQEGKEEALLAHSERLAVSHGLLSSP-ARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
HD+ +E K +++ HSE+LA++ L+ P R PIRIMKN+RVCGDCH +K +SKI+ R
Sbjct: 612 HDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRR 671
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
+I+RD RFHHF +G CSC+D W
Sbjct: 672 PIILRDINRFHHFIEGRCSCKDSW 695
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N +L YS+ +++D +VF M+ D S++T+I GF+ NG A++ F + ++
Sbjct: 89 VFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQE 148
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G + D + V ACS L D+ G +H ++ G S+ + ++ +M G L
Sbjct: 149 EGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLG--ESVFVWNALTNMYAKCGAL 206
Query: 564 DEALEFIEKMPMEPDVDVWEKLMN 587
D+A ++M + +V W +++
Sbjct: 207 DQARWLFDRM-VNKNVVSWNSMIS 229
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC ++ K +H + V +N + MY++C ++D A +F M
Sbjct: 157 THVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRM 216
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+++ SW++MI+G+ +NG E +F + + +GL PD + SA G + E
Sbjct: 217 VNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEAC 276
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME---PD-------VDV 581
F + + + + +++ G ++AL +M +E PD V
Sbjct: 277 KTFREIKEKDKVC-----WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSS 331
Query: 582 WEKLMNLCR---MHG 593
+L +LC+ +HG
Sbjct: 332 CARLASLCQGQAVHG 346
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 255/472 (54%), Gaps = 23/472 (4%)
Query: 325 DQSRRQYQQNPNEGQYQSY--SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQL 382
D + R QQ EG + +I + S L+N K D+ +A+ N L
Sbjct: 334 DGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNAL 393
Query: 383 -DGLVKEGKVKEAIEVLG-LLEKQCISV---------DLPTFSQLMQACGDAKALEEAKA 431
D K G + A V ++ K IS D T + ++ AC ALE K
Sbjct: 394 MDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKE 453
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+H ++ R N ++ +Y +C + A +F + +DL SW MI+G+ +G
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGY 513
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
G +A+ F++ + AG++PD+ FI + ACS G + +G F M D+ I P ++HY
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
+VD+L TG L +A EFIE +P+ PD +W L+ CR++ ++EL ++ AE V +L+P
Sbjct: 574 CMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPE 633
Query: 612 RLNEKSKAGLVPVNASEL-----AKEKENKKLASQN----LLEVRSKVHEYRAGD-TSHP 661
+ A + +EK KK +N +E++ KV+ + +G+ +SHP
Sbjct: 634 NTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHP 693
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
+ KI +L++ +R +MKE GY P+T++ L + D+ KE AL HSE+LA++ GLL+ P R
Sbjct: 694 HSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPR 753
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+R+ KNLRVCGDCH K +SK RE+++RD+ RFHHFK+G CSCR +W
Sbjct: 754 KTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G + +E+ + I VDL T ++ C ++ L KAVH +
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKST 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
R++ N +L MYS+C +D A VF M ER++ SW +MI G+ ++G + A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV----SIVD 555
Q ++ G+K D + AC+ G + G +H DY +M+ + +++D
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVH------DYIKANNMESNLFVCNALMD 395
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G +D A M ++ D+ W ++
Sbjct: 396 MYTKCGSMDGANSVFSTMVVK-DIISWNTMI 425
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 55/249 (22%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE-------HVERLLS 441
G ++ A+E++ + +K ++ T+S ++Q C +K+L + K VH V+ +L
Sbjct: 80 GNLENAMELVCMCQKS--ELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLG 137
Query: 442 PLRVSTY------------------------NGILKMYSECDSMDDAFSVFSNMTE---- 473
VS Y N ++ Y++ ++ +F M E
Sbjct: 138 LKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 197
Query: 474 ----------------RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
RD+ SW++MI+G+ NGL E ++I+ Q G+ D I V
Sbjct: 198 GKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISV 257
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
C+ G + G S++ + +++DM G LD AL EKM E
Sbjct: 258 LVGCANSGTLSLGK-AVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ER 315
Query: 578 DVDVWEKLM 586
+V W ++
Sbjct: 316 NVVSWTSMI 324
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ +EA+E+ ++K + T S ++ AC ++ L K +H +V R
Sbjct: 287 IGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWK 346
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+++ +L MY++C ++ + +VF M +D+ +W+TMI A +G G++A+ +F +
Sbjct: 347 VGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDK 406
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ F GV S CS V EG+ F SM +D+ + P HY +VD+ G
Sbjct: 407 MLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 466
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA +FI+ MPMEP W L+ CR++ N+EL A+ + +++P+
Sbjct: 467 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFN 526
Query: 622 VPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ V A L KE+ K + L+V +KVH + GD S+ E+DKIY +
Sbjct: 527 ILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDE 586
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK AGY P+T +VL DIDQE K E+L HSE+LAV+ G+L+ ++ IR+ KNLR+
Sbjct: 587 LVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 646
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K +SK+VG +++RD+ RFHHFK+G CSC+D W
Sbjct: 647 CGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L G EAI++ L+++ I D+P F +AC + K VH+ R
Sbjct: 50 ISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV 109
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ Y +C ++ A VF ++ RD+ SW ++ + + K G +D+F +
Sbjct: 110 MSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFRE 169
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G+KP+ + AC+ L D+ G + +G+V ++ ++V +
Sbjct: 170 MGWSGVKPNPMTVSSILPACAELKDLKSGK-EIHGFAVRHGMVVNLFVCSALVSLYAKCL 228
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+ EA + MP DV W ++
Sbjct: 229 SVREARMVFDLMP-HRDVVSWNGVLT 253
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ AC + K L+ K +H R + + + ++ +Y++C S+ +A VF M
Sbjct: 181 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 240
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+ ++T + KN E +F + + G++ D+ + V C G E +
Sbjct: 241 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 300
Query: 532 LHFESMSK 539
F M K
Sbjct: 301 EMFRKMQK 308
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F N+ + D T+ T+I+ +GL +A+ I+S ++ G+KPD +F+ AC+ GD
Sbjct: 34 LFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGD 93
Query: 527 VVE 529
+
Sbjct: 94 ALR 96
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 229/375 (61%), Gaps = 15/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTY-NGILKMYSECDSMDDAFSVFS 469
T ++ AC A+E + +H ++ +RL S++ ++ MY++C ++ A VF
Sbjct: 323 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 382
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
++ R L+SW+ MI GFA +G A DIFS+ ++ ++PDD F+G+ SACS G +
Sbjct: 383 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 442
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G F SM +DY I P ++HY ++D+LG +G EA E I M MEPD +W L+ C
Sbjct: 443 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 502
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAK------EKENKKL 638
+MHGN+ELG+ A+ + +++P N S L + A+ E+AK +K KK+
Sbjct: 503 KMHGNVELGESYAQNLIKIEPK--NPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKV 560
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL ++++E K
Sbjct: 561 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWK 620
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I RD R
Sbjct: 621 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 680
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+DG+CSC DYW
Sbjct: 681 FHHFRDGVCSCNDYW 695
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%), Gaps = 12/304 (3%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H L Y + +H + S Y Q NG + + +R+ + Q+ + SY+ I
Sbjct: 111 HGHVLKLGYDLDLYVHTSLISMYVQ--NG---RLEDARKVFDQSSHR-DVVSYTALITGY 164
Query: 351 MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDL 410
+ + K D+ S N + G + G KEA+E+ + K + D
Sbjct: 165 ASKGYIASAQKMFDEIPIKDVVSWN----AMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T ++ AC + ++E + VH ++ + N ++ +Y +C ++ A +F
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ +D+ SW+T+I G+ L ++A+ +F + ++G P+D + + AC+ LG + G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + G+ + H S++DM G ++ A + + + + + W ++
Sbjct: 341 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGF 399
Query: 590 RMHG 593
MHG
Sbjct: 400 AMHG 403
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C +KA E + +H HV +L L + + ++ MY + ++DA VF
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149
Query: 472 TERDLTSWDTMITGFAKNGL-------------------------------GEDAVDIFS 500
+ RD+ S+ +ITG+A G ++A+++F
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SAC+ + G S D+G ++K +++D+
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGR-QVHSWIDDHGFGSNLKIVNALIDLYIKC 268
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 269 GEVETACGLFEGLSYK-DVISWNTLI 293
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 222/402 (55%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ LV+E KEAIE+ +++ + I+ D T + ACG AL+ AK +H ++++
Sbjct: 444 MIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD 503
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ M++ C A VF+ M +RD+++W I A G G A+++F
Sbjct: 504 IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFD 563
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ Q G+KPD +F+ + +A S G V +G F SM YGI P HY +VD+LG
Sbjct: 564 EMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRA 623
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L EAL I M MEP+ +W L+ CR+H N+++ AE + +LDP R
Sbjct: 624 GLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLS 683
Query: 621 LVPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ +A KEK K+ + +E+ K+ E+ GD SHPE I +++
Sbjct: 684 NIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLK 743
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++++ GY+P+ VL D++++ KE L HSE+LA++ L+S+ PIR+ KNLR
Sbjct: 744 EICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLR 803
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCHS K++SK RE+I+RD RFH F+ G CSC DYW
Sbjct: 804 ICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ AC + AL E VH + ++ + N ++ Y EC +D VF M
Sbjct: 141 TFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKM 200
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
+ER++ SW ++I G+AK G ++AV +F + + G++P+ +GV SAC+ L D+
Sbjct: 201 SERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDL 256
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 35/241 (14%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V++G +E + VLG + K D T + AC + + K H +V R
Sbjct: 317 VRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWD 376
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF------ 499
+ N I+ MY +C + A VF M + SW+++I GF +NG E A IF
Sbjct: 377 NVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDS 436
Query: 500 ---------------SQFKQA----------GLKPDDQIFIGVFSACSALGDV-VEGMLH 533
S FK+A G+ D +GV SAC LG + + +H
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
KD I M ++VDM G A++ KM ++ DV W + M G
Sbjct: 497 GYIKKKD--IHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEG 553
Query: 594 N 594
N
Sbjct: 554 N 554
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 71/149 (47%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G K G KEA+ + + + I + T ++ AC + L+ + V + L
Sbjct: 212 IGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELEL 271
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY +C ++D A +F +++L ++T+++ + + GL + + + +
Sbjct: 272 EVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGE 331
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ G +PD + SACS L DV G
Sbjct: 332 MLKHGPRPDRITMLSAVSACSELDDVSCG 360
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
+ ++I GF+ GLG A+ +F Q G PD+ F V SAC+ + EG ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
K G M S++ G G +D +KM E +V W L+
Sbjct: 167 K-MGFERDMFVENSLIHFYGECGEIDCMRRVFDKMS-ERNVVSWTSLI 212
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 236/393 (60%), Gaps = 9/393 (2%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K ++A++V G + ++ + + +F+ + +C +AL+ + +H +L V N
Sbjct: 284 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 343
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY C +++D +F ++++++ SW+++I G A++G G A+ F+Q ++ ++P
Sbjct: 344 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 403
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D+ F G+ SACS G +G F+ S++ + HY +VD+LG +G L+EA E
Sbjct: 404 DEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEEL 463
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKSKAGLVP 623
I MP++ + VW L++ C MH LE+ +R A+ + L+P L+ +
Sbjct: 464 IRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRW 523
Query: 624 VNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
+ S + +E + + + Q + + ++ +E+ +GD SHP +D+IY + L ++KE
Sbjct: 524 SDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKEL 583
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+ RF LHD++ E KE L HSERLA+ GL+S+ + I +MKNLRVCGDCHSA+
Sbjct: 584 GYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAI 643
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+I+KIV R++I+RD+ RFHHF DG CSC DYW
Sbjct: 644 KLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQ--C---ISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
+ GL + G+ +EA LGL + C + T+ ++ AC +A AL + +H H
Sbjct: 172 MIGGLDQHGRSEEA---LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAH 228
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
V +L ++ Y+ C M+D+ VF ++ W ++TG+ N EDA
Sbjct: 229 VFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDA 288
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +F + + G+ P+ F ++C L + ++ + + G+ + S++
Sbjct: 289 LKVFGEMMREGVLPNQSSFTSALNSCCGL-EALDWGREIHTAAVKLGLETDVFVGNSLIV 347
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L++ + +++ + ++ W ++ C HG
Sbjct: 348 MYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHG 384
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R ++ +N ++ Y ++D +F M R++ SW +MI G ++G E+A+ +F
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190
Query: 501 QFKQAG--LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVD 555
Q G +KP + V +AC+ + +G+ +H Y S Y+S ++
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY----SFDAYISAALIT 246
Query: 556 MLGSTGYLDEALE-FIEKMPMEPDVDVWEKLMN 587
+ ++++L F K+ M +V +W L+
Sbjct: 247 FYANCKQMEDSLRVFHGKLHM--NVVIWTALVT 277
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P++ V ++N ++K +C + A +F M ER + SW TMI GF + G E A +F
Sbjct: 69 PVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFY 128
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + + G C+ G V +G+ F+ M ++ + S++ L
Sbjct: 129 KMPFRDIAAWNSMIYGY--CCN--GRVEDGLRLFQEMP-----CRNVISWTSMIGGLDQH 179
Query: 561 GYLDEALEFIEKM 573
G +EAL +M
Sbjct: 180 GRSEEALGLFRQM 192
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 234/406 (57%), Gaps = 16/406 (3%)
Query: 382 LDGLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER- 438
+ G + G+ EA+E+ L + + T S + AC AL + +H +V R
Sbjct: 468 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 527
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ N ++ MYS+ +D A VF NM +R+ SW +++TG+ +G GE+A+ I
Sbjct: 528 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 587
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + ++ L PD F+ V ACS G V +G+ +F M+KD+G+VP +HY +VD+L
Sbjct: 588 FYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 647
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G LDEA+E I MPM+P VW L++ CR++ N+ELG+ A + +L+ N+ S
Sbjct: 648 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESG--NDGSY 705
Query: 619 AGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A+ L K KK + ++ R + AGD SHP + +IY
Sbjct: 706 TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 765
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
L+R L ++K GY+P+ RF LHD+D E K + L HSE+LA+++G+L++ APIRI
Sbjct: 766 DLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRIT 825
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR CGDCHSA IS I+ E+I+RD+ RFHHFK+G CSCR YW
Sbjct: 826 KNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 102/207 (49%), Gaps = 8/207 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +++ +++ +++ D TF +++ACG+ + +VH V V
Sbjct: 121 VHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNV 180
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER---DLTSWDTMITGFAKNGLGEDAVDIFSQF 502
NG++ MY C + ++A VF M ER DL SW++++ + + G A+ +F +
Sbjct: 181 FVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM 240
Query: 503 KQ-AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G++PD + V AC+++G G +H ++ G+ + ++VDM
Sbjct: 241 TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRS--GLFEDVFVGNAVVDMYAKC 298
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMN 587
G ++EA + E+M ++ DV W ++
Sbjct: 299 GMMEEANKVFERMKVK-DVVSWNAMVT 324
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 39/177 (22%)
Query: 393 EAIEVLGLLEKQC----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
++I + + E+ I D + ++ AC A K VH + R V
Sbjct: 229 DSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG 288
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT------------------------ 484
N ++ MY++C M++A VF M +D+ SW+ M+T
Sbjct: 289 NAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIE 348
Query: 485 -----------GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
G+A+ GLG +A+D+F Q G +P+ + + S C++ G ++ G
Sbjct: 349 LNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHG 405
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 31/257 (12%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G EA++V + ++ T L+ C A L K H H + +
Sbjct: 358 IAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWIL 417
Query: 442 PLR-------VSTYNGILKMYSECDSMDDAFSVFSNMTERD--LTSWDTMITGFAKNGLG 492
L + N ++ MYS+C S A ++F + +D + +W +I G A++G
Sbjct: 418 NLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA 477
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFS-ACSALGDVVEGMLHFESMSKDYGI---VPSMK 548
+A+++FSQ L+PD+ + F+ +C+ + G L F Y + S
Sbjct: 478 NEALELFSQM----LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 533
Query: 549 HYVS--IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
+V+ ++DM +G +D A + M V W LM MHG G+ +I
Sbjct: 534 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTGYGMHGR---GEEALQI-- 587
Query: 607 QLDPSRLNEKSKAGLVP 623
E K LVP
Sbjct: 588 ------FYEMQKVXLVP 598
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 208/368 (56%), Gaps = 10/368 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
L+QAC AL+ + V + E + N ++ MY C +D A+ VFS ++
Sbjct: 230 LLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKS 289
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ +W MI+G A NG G DA+ +F + ++ + PD+Q F GV SACS G V EG F+
Sbjct: 290 VVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFD 349
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE-KMPMEPDVDVWEKLMNLCRMHGN 594
M +YG+ P+++HY IVD++G G LDEA EF+ +M + PD +W L+ CR+HG+
Sbjct: 350 MMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGH 409
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ---------NLLE 645
++LG+R + +L + + E +K E +KL + +E
Sbjct: 410 VDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGCTTVE 469
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
VHE+ A D +HP +IY + + Q++ AGY+P LHD+D EGKE AL H
Sbjct: 470 HNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESALTYH 529
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE+LA++ LL +P PIR+ KNLRVC DCH+ K+ S I R +I+RD RFHHF+ G
Sbjct: 530 SEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDRTRFHHFQGG 589
Query: 766 LCSCRDYW 773
CSC DYW
Sbjct: 590 KCSCNDYW 597
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAG 506
+++ Y+ D A +F M RD +W+ +IT +A+N +DA+ +F + K +
Sbjct: 160 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 219
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+PDD I + ACS+LG + G + ++++G +K S++ M G +D+A
Sbjct: 220 SEPDDVTCILLLQACSSLGALDFGE-QVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKA 278
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
P + V W +++
Sbjct: 279 YRVFSGTP-QKSVVTWTAMIS 298
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 226/398 (56%), Gaps = 12/398 (3%)
Query: 387 KEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G EA EV L++ + ++ + T S ++ A + AL K +H+ V R+ V
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
I+ MY +C ++ A F M +++ SW MI G+ +G A+++F +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++P+ F+ V +ACS G VEG F +M +G+ P ++HY +VD+LG G+L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I++M M+PD +W L+ CR+H N+EL + + +LD S + +
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 626 ASELAKEKENKKLASQN----------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
A K+ E ++ +N LLE+ +VH + GD HP+ +KIY + L
Sbjct: 503 AGRW-KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++ EAGY+ T V HD+D+E KE L HSE+LA++ G++++ + + ++KNLRVC D
Sbjct: 562 KLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSD 621
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K+ISKIV RE ++RDAKRFHHFKDG CSC DYW
Sbjct: 622 CHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ + K + +F ++AC + K H+
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSD 110
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MYS C ++DA VF + +RD+ SW +MI G+ NG DAV +F
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLV 170
Query: 505 AGLKPDDQIF------IGVFSACS 522
DD +F + V SACS
Sbjct: 171 DENDDDDAMFLDSMGLVSVISACS 194
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 215/377 (57%), Gaps = 15/377 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T L+QAC + ALE + VH H+ + N ++ MYS+ ++D AF VF
Sbjct: 126 DDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVF 185
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M +++ +W +I+G A NG G +A+ F + + G+ PDD F GV SACS G V
Sbjct: 186 KGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVD 245
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+GM+ F MSK++GIVP++ HY +VD+LG G L +A + I M ++PD +W L+
Sbjct: 246 KGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGA 305
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV------------PVNASELAKEKENK 636
CR+H N+ LG+ +VE L + E L+ + KEK +
Sbjct: 306 CRIHRNVILGE---HVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQ 362
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
+ + +E++ KVHE+ D SHP+ D+IY ++ + Q+K AGY+ E L ++D E
Sbjct: 363 TTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAE 422
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
K L HSE+LA++ G+L++P IRI KNLR+C DCH+ KI+S + R++II D
Sbjct: 423 EKRYVLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDH 482
Query: 757 KRFHHFKDGLCSCRDYW 773
RFHHF+ G CSC DYW
Sbjct: 483 TRFHHFRGGHCSCNDYW 499
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK--QAGLK 508
++ +YS CD +A VF M +RD +W+ +I+ + +N D + IF + G +
Sbjct: 65 LMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCE 124
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
PDD + + AC+ LG + G +H + + Y ++ + S++ M G LD+A
Sbjct: 125 PDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCN--SLIAMYSQFGNLDKAF 182
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ M +V W +++ M+G
Sbjct: 183 GVFKGMH-NKNVVTWSAIISGLAMNG 207
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 226/398 (56%), Gaps = 12/398 (3%)
Query: 387 KEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ G EA +V L++++ ++ + T S ++ A + AL K +H+ V R+ V
Sbjct: 263 QSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
I+ MY +C ++ A F M +++ SW MI G+ +G A+++F +
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++P+ F+ V +ACS G G F +M +G+ P ++HY +VD+LG G+L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I+KM MEPD +W L+ CR+H N+EL + + +LDPS + +
Sbjct: 443 AYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYAD 502
Query: 626 ASELAKEKENKKLASQN----------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+ K+ E ++ +N LLE+ +VH + GD HP+ +KIY + L
Sbjct: 503 SGRW-KDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++ EAGY+ T V HD+D+E KE L HSE+LA++ G++++ + + ++KNLRVC D
Sbjct: 562 KLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSD 621
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+ +K+ISKIV RE ++RDAKRFHHFKDG CSC DYW
Sbjct: 622 CHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L + G EA+ + K + +F ++AC + K H+
Sbjct: 51 LARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSD 110
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-- 502
+ + ++ MYS C ++DA VF + +R++ SW +MI G+ NG DAV +F
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLI 170
Query: 503 ----KQAGLKPDDQIFIGVFSACSALG 525
A + D + V SACS +
Sbjct: 171 EENDDDATMFLDSMGMVSVISACSRVA 197
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 210/336 (62%), Gaps = 13/336 (3%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY+ S+++A VF T+RDL SW++M++G+A++G + A+D+F Q + G+
Sbjct: 497 SALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGID 556
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D F+ V C+ G V EG +F+ M +DYGI P+M HY +VD+ G LDE +
Sbjct: 557 MDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMS 616
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
IE MP +W L+ CR+H N+ELG AE + L+P L+ + L + ++
Sbjct: 617 LIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEP--LDSATYVLLSNIYSAA 674
Query: 628 ----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+L K+ +K A + +++++KVH + A D SHP +++IYA +R + A++
Sbjct: 675 GKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKL 734
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K+ GY P+T FV HD+ ++ KE L HSERLA++ GL+++P AP+ I KNLRV GD H
Sbjct: 735 KQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGH 794
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ +K++S+I RE+++RD RFHHFK G+CSC D+W
Sbjct: 795 TVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 9/221 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G ++ G + + + + + + + + TFS ++ ++ + VH +
Sbjct: 129 LTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGC 188
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++C +++A VF M RD+ SW+T++ G NG +A+ +F
Sbjct: 189 CSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHD 248
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMS---KDYGIVPSMKHYVSIVDML 557
+ + + + V + C+ L + + LH + YG V + +++D
Sbjct: 249 SRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMT-----ALMDAY 303
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
G LD+AL+ M +V W +++ C +G++ L
Sbjct: 304 NKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+RV T ++ MY S+ D VF M +R++ +W +++TG+ + G+ D + +F +
Sbjct: 91 IRVGT--SLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRM 148
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ G+ P+ F V S ++ G V G H + S +G ++ S+++M G
Sbjct: 149 RAEGVWPNPFTFSSVLSMVASQGMVDLGQ-HVHAQSIKFGCCSTVFVCNSLMNMYAKCGL 207
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
++EA +M D+ W LM
Sbjct: 208 VEEARVVFCRMETR-DMVSWNTLM 230
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 115/273 (42%), Gaps = 20/273 (7%)
Query: 329 RQYQQNPNEGQYQSYSGNIQNGMM-----ASQVLNNCKHEDDFAEASRSSQNNGTLEQLD 383
RQ + + + SY GN+ +M A Q+ K D F S S +D
Sbjct: 278 RQLHSSVLKHGFHSY-GNVMTALMDAYNKAGQLD---KALDVFLLMSGSQNVVSWTAMID 333
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK---AVHEHVERLL 440
G ++ G + A + + + ++ + T+S ++ + EA +H V +
Sbjct: 334 GCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL-------TVSEASFPPQIHAQVIKTN 386
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ YS+ S ++A S+F + ++D+ SW M+T +A+ G A + F
Sbjct: 387 YECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFI 446
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GLKP++ AC++ V+ F ++S + ++ ++V M
Sbjct: 447 KMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 506
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A E+ + D+ W +++ HG
Sbjct: 507 GSIENAQCVFERQT-DRDLLSWNSMLSGYAQHG 538
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 230/367 (62%), Gaps = 9/367 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ AC AL+ ++VH + R +S L V +++MY +C + +F M +++
Sbjct: 196 VLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKN 255
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
S+ MI+G A +G G + + IF++ + GL+PDD +++GV +ACS G V EG+ F
Sbjct: 256 KLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFN 315
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M ++GI P+++HY +VD++G G +DEALE I+ MPMEP+ +W L++ ++H NL
Sbjct: 316 RMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNL 375
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA---SELAKEKEN---KKLASQ---NLLEV 646
+ G+ A+ + +LD + ++ + A ++A+ + N K L+ + +L+EV
Sbjct: 376 QAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEV 435
Query: 647 RSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHS 706
+ K+H + + D HP+++ +Y ++ + Q+K GY P+T VL D+D+E K++ L HS
Sbjct: 436 KRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHS 495
Query: 707 ERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
++LA+++ L+ + +P+RI++NLR+C DCH+ K+IS I RE+ +RD RFHHFKDG
Sbjct: 496 QKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGA 555
Query: 767 CSCRDYW 773
CSCRDYW
Sbjct: 556 CSCRDYW 562
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 29/300 (9%)
Query: 345 GNIQNGMMASQVLNNCKHED----DFA-EASRSSQNNGTLE---QLDGLVKEGKVKEAIE 396
G + AS ++ C D D+A R G+ Z + G VK+ +EA+
Sbjct: 15 GLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALI 74
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYS 456
+ ++ + D T+ L++AC A+EE VH H+ +L V N ++ MY
Sbjct: 75 TYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYG 134
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFI 515
+C + +VF M ER + SW +IT A G+ D + + G + ++ I +
Sbjct: 135 KCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILV 194
Query: 516 GVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
V SAC+ LG + V G L ++S IV + S+++M G L + +
Sbjct: 195 SVLSACTHLGALDLGRSVHGFL-LRNVSGLNVIVET-----SLIEMYLKCGXLYKGMCLF 248
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRC-AEIVEQ-LDPS------RLNEKSKAGLV 622
+KM + + + +++ MHG G R E++EQ L+P LN S AGLV
Sbjct: 249 QKMAKKNKLS-YSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLV 307
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 225/405 (55%), Gaps = 45/405 (11%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G +EA+ + + I D + ++ AC + LE K VH + +
Sbjct: 414 VTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGL 473
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ MY++C ++DA VF +M +D+ +W +I G+A+NG G D
Sbjct: 474 GSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------- 526
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AGL V G +F+SM + YGI P +HY ++D+LG +G
Sbjct: 527 --HAGL-------------------VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSG 565
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EA E + +M ++PD VW+ L+ CR+HGN+ELG+R A + +L+P N
Sbjct: 566 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSN 625
Query: 615 EKSKAGLVPVNASELAKEKENKKL------ASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
S AG E AK + KL + +E+ SKVH + + D SHP T +IY+
Sbjct: 626 LYSAAG----KWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYS 681
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ + +KEAGY+P+ F LHD+D+EGKE L HSE+LAV+ GLL+ P APIRI K
Sbjct: 682 KVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFK 741
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+CGDCH+A+K +S + R +I+RD+ FHHF++G CSC DYW
Sbjct: 742 NLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V++G +EA+ + ++ + + +D T+ ++ + A +VH + +
Sbjct: 312 MIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTG 371
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
N ++ MY++ D AF VF MT++D+ SW +++TG NG E+A+ +F
Sbjct: 372 FEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFC 431
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+ PD + V SAC+ L V+E + G+ S+ S+V M
Sbjct: 432 EMRIMGIHPDQIVIAAVLSACAEL-TVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC 490
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +++A + + M ++ DV W L+
Sbjct: 491 GCIEDANKVFDSMEIQ-DVITWTALI 515
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 142/350 (40%), Gaps = 31/350 (8%)
Query: 269 NSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGG----QYQW 324
NS R +E+ F ++ +SG+ +G + + + Q G Q+ W
Sbjct: 84 NSGRLNEARKLFYETPIRSCITWSSLISGY--CRYGCDVEALELFWEMQYEGERPNQFTW 141
Query: 325 DQSRR------------QYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRS 372
R Q + + Q+ S + + G++ C E ++
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDS-NAFVVTGLVDMYAKCKCILEAEYLFELAP 200
Query: 373 SQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
+ N L + G + G +AIE + + I + TF ++ ACG A
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
VH + R V + ++ MYS+C + +A + M D SW++MI G + G
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM----LHFESMSKDYGIVPS 546
LGE+A+ +F +K D+ + V + S + D+ M L ++ + Y +V +
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNN 380
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++VDM GY D A + EKM + DV W L+ C +G+ E
Sbjct: 381 -----ALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCVHNGSYE 424
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L S+C +DDA +F M +RD SW+TMI +A +G +A +F +
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYE 97
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y+ +++A +F R +W ++I+G+ + G +A+++F + + G
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS-IVDMLGSTGYLD 564
+P+ + V CS + +G +H ++ + S V+ +VDM +
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQF---DSNAFVVTGLVDMYAKCKCIL 190
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
EA E P + + +W ++
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVT 213
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 268/496 (54%), Gaps = 28/496 (5%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H +AL +S N + Y G + +RR +++ P + + +
Sbjct: 170 HSRALKLGFSSNRLVRLRIMELY-----GKCGELGDARRVFEEMPED--------VVAST 216
Query: 351 MMASQVLNNCKHEDDFAEASRSSQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQCISV 408
+M S + E+ A SR + + +DG V+ + A+E ++ + +
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 276
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
+ T ++ AC ALE + VH ++ + L + N ++ MYS C S+D+A +VF
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M +RD+ +++TMI+G + NG A+++F L+P + F+GV +ACS G V
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G F SM++DY + P ++HY +VD+LG G L+EA + I M M PD + L++
Sbjct: 397 FGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKENKKLASQ-- 641
C+MH NLELG++ A+ +E D + + + L V AS E A+ + K A
Sbjct: 457 CKMHKNLELGEQVAKELE--DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 514
Query: 642 ----NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ +EV +++HE+ GD HP+ ++IY + L ++ GY PE VL DI+
Sbjct: 515 EPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGE 574
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE AL HSERLA+ +GL+S+ IR+MKNLRVC DCHSA+K+I+KI R++++RD
Sbjct: 575 KEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRN 634
Query: 758 RFHHFKDGLCSCRDYW 773
RFH+F++G CSC DYW
Sbjct: 635 RFHYFENGACSCGDYW 650
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 39/322 (12%)
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCK--HEDD 365
N S DQ +SR Q P Q +G+ Q+ M ++L +C H D
Sbjct: 40 NPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR-NGHSQDPFMVFELLRSCSKCHAID 98
Query: 366 FAEASRSSQNNGTL----EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG 421
+A +N + +DG V G EAI++ + + I D + +++ACG
Sbjct: 99 YASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACG 158
Query: 422 DAKALEEAKAVHEHVERL------LSPLRVSTYNG------------------------I 451
AL E + VH +L L LR+ G +
Sbjct: 159 SQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVM 218
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ YS+ +++A +VFS + +D W MI GF +N A++ F + ++P++
Sbjct: 219 ISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNE 278
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ V SACS LG + G M K + I ++ ++++M G +DEA +
Sbjct: 279 FTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFD 337
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
+M + DV + +++ M+G
Sbjct: 338 EMK-DRDVITYNTMISGLSMNG 358
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 223/379 (58%), Gaps = 18/379 (4%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + ++ AC ALE K +H ++ R N ++ +Y +C + A +F
Sbjct: 431 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +DL SW MI G+ +G G +A+ F++ + AG++PD+ FI + ACS G +
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 550
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G F M D+ I P ++HY +VD+L TG L +A +FIE +P+ PD +W L+
Sbjct: 551 QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL----- 643
CR++ ++EL ++ AE V +L+P E + ++ N A+++E K + +
Sbjct: 611 CRIYHDIELAEKVAERVFELEP----ENTGYYVLLANIYAEAEKREEVKRMREKIGKKGL 666
Query: 644 --------LEVRSKVHEYRAGD-TSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
+E++ +V+ + +G+ +SHP + KI +L++ +R +MKE GY P+T++ L + D
Sbjct: 667 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+ KE AL HSE+LA++ GLL+ P R IR+ KNLRVCGDCH K +SK RE+++R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D+ RFHHFKDG CSCR +W
Sbjct: 787 DSNRFHHFKDGYCSCRGFW 805
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G + + + + I VDL T ++ C ++ L KAVH +
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
R++ N +L MYS+C +D A VF M ER++ SW +MI G+ ++G + A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
Q ++ G+K D + AC+ G + G
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNG 371
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 97/253 (38%), Gaps = 63/253 (24%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE----------- 437
G ++ A+E++ + +K ++ T+ ++Q C K+L + K VH ++
Sbjct: 80 GDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALG 137
Query: 438 -----------------RLLSPLR---VSTYNGILKMYSECDSMDDAFSVFSNMTE---- 473
R+ + V +N ++ Y++ ++ +F M E
Sbjct: 138 LKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE 197
Query: 474 ----------------RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
RD+ SW++MI+G+ NGL E + I+ Q G+ D I V
Sbjct: 198 GKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISV 257
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKM 573
C+ G L I S + + +++DM G LD AL EKM
Sbjct: 258 LVGCAN-----SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 574 PMEPDVDVWEKLM 586
E +V W ++
Sbjct: 313 G-ERNVVSWTSMI 324
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 234/406 (57%), Gaps = 17/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG V + + EAI + + + + + T +++AC DA A+ + V +E
Sbjct: 169 IDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKI 228
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + ++ MY++C S+ A VF + +D+ +W MI+G A +GL E+AV +F Q
Sbjct: 229 GLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQ 288
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ GL+PD++ V SAC G EG +F SM YGI P+++HY +VD+L TG
Sbjct: 289 MESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTG 348
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE-----QLDPSRLNEK 616
+LDEA EFI KMP+EPDV +W L+ ++HG++ DR ++++ ++D
Sbjct: 349 HLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDI---DRSEQLMKDRGLLKMDSDDCGSY 405
Query: 617 SKAGLVPVNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIY 667
G V +A + + + ++L +Q + +EV VHE+ AGD+ H E +KIY
Sbjct: 406 VLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEKIY 465
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + + ++K GY P+ VL +ID + K L HSE+LAV+ GL+ + IRI+
Sbjct: 466 AKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIRIV 525
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR C DCHS LK+ISKI +++I+RD RFHHF +G CSC+DYW
Sbjct: 526 KNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
T+ L+++C K K +H + + S L Y NG++ MYS C A+ VF
Sbjct: 98 TYPFLLKSCARLKQPRVGKQLHGLIYK--SGLESDRYVSNGLIHMYSSCGKSGRAYKVFG 155
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-- 527
M +RD+ SW +MI GF + +A+ +F + + G++P++ + V AC+ G V
Sbjct: 156 KMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGM 215
Query: 528 ---VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
V+G++ + G+ +++ +++DM G + A + + + + DV W
Sbjct: 216 GRRVQGVIE----ERKIGLEANVR--TALIDMYAKCGSIGSARKVFDGI-VNKDVFAWTA 268
Query: 585 LMNLCRMHGNLE 596
+++ HG E
Sbjct: 269 MISGLANHGLCE 280
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 233/405 (57%), Gaps = 15/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+E+ L+ + + + T++ ++ A AL+ K VH HV R
Sbjct: 438 ISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEI 497
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
P V N ++ MYS+C ++ + +F M ER + SW+ M+ G++K+G G + + +F+
Sbjct: 498 PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTL 557
Query: 502 FKQ-AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK-DYGIVPSMKHYVSIVDMLGS 559
++ +KPD + V S CS G +G+ F MS + P M+HY +VD+LG
Sbjct: 558 MREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGR 617
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
+G ++EA EFI+KMP EP +W L+ CR+H N+++G+ + + +++P N +
Sbjct: 618 SGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPG--NAGNYV 675
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS +L +K K ++ +E+ +H + A D SHP ++I
Sbjct: 676 ILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICM 735
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ L KE GY+P+ VLHD+D+E KE+ LL HSE+LA+S GL++SPA PIR++K
Sbjct: 736 KVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIK 795
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH+ K ISK+ GRE+ +RD RFH G CSC DYW
Sbjct: 796 NLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 31/192 (16%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++ ++ C + +A E + VH H+ + V ++ +Y++CDS+ DA +VF M
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL---------------------KPDD 511
ER++ SW MI+ +++ G A+++F + L +P++
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 512 QIFIGVFSAC-SALGDVVEGMLHFESMS---KDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
F V ++C S+LG ++ +H + +D+ V S S++DM G + EA
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGS-----SLLDMYAKDGKIHEAR 420
Query: 568 EFIEKMPMEPDV 579
E +P E DV
Sbjct: 421 TVFECLP-ERDV 431
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ +C + + +H + +L V + +L MY++ + +A +VF +
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ERD+ S +I+G+A+ GL E+A+++F + + G+K + + GV +A S L + G
Sbjct: 427 PERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK 486
Query: 531 MLHFESMSKDYGIVPSMKHYV-SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + + +PS S++DM G L + + M E V W ++
Sbjct: 487 QVHNHVLRSE---IPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGY 542
Query: 590 RMHG 593
HG
Sbjct: 543 SKHG 546
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ +EA+E+ ++K + T S ++ AC ++ L K +H +V R
Sbjct: 373 IGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWK 432
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+++ +L MY++C ++ + +VF M +D+ +W+TMI A +G G++A+ +F +
Sbjct: 433 VGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDK 492
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ F GV S CS V EG+ F SM +D+ + P HY +VD+ G
Sbjct: 493 MLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 552
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA +FI+ MPMEP W L+ CR++ N+EL A+ + +++P+
Sbjct: 553 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFN 612
Query: 622 VPVNASE---------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ V A L KE+ K + L+V +KVH + GD S+ E+DKIY +
Sbjct: 613 ILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDE 672
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +MK AGY P+T +VL DIDQE K E+L HSE+LAV+ G+L+ ++ IR+ KNLR+
Sbjct: 673 LVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 732
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K +SK+VG +++RD+ RFHHFK+G CSC+D W
Sbjct: 733 CGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 2/206 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L G EAI++ L+++ I D+P F +AC + K VH+ R
Sbjct: 136 ISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGV 195
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ Y +C ++ A VF ++ RD+ SW ++ + + K G +D+F +
Sbjct: 196 MSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFRE 255
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G+KP+ + AC+ L D+ G + +G+V ++ ++V +
Sbjct: 256 MGWSGVKPNPMTVSSILPACAELKDLKSGK-EIHGFAVRHGMVVNLFVCSALVSLYAKCL 314
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMN 587
+ EA + MP DV W ++
Sbjct: 315 SVREARMVFDLMPHR-DVVSWNGVLT 339
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ AC + K L+ K +H R + + + ++ +Y++C S+ +A VF M
Sbjct: 267 TVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLM 326
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+ ++T + KN E +F + + G++ D+ + V C G E +
Sbjct: 327 PHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAV 386
Query: 532 LHFESMSK 539
F M K
Sbjct: 387 EMFRKMQK 394
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F N+ + D T+ T+I+ +GL +A+ I+S ++ G+KPD +F+ AC+ GD
Sbjct: 120 LFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGD 179
Query: 527 VVE 529
+
Sbjct: 180 ALR 182
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 221/377 (58%), Gaps = 15/377 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ C AL + K +H + R L +V+ + ++ MY++C ++ A VF M
Sbjct: 438 TLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM 497
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-----LKPDDQIFIGVFSACSALGD 526
R++ +W+ +I + +G G++++++F G +KP + FI +F++CS G
Sbjct: 498 PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKL 585
V EG+ F M ++GI P+ HY IVD++G G ++EA + MP D V W L
Sbjct: 558 VDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSL 617
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKENK 636
+ CR++ N+E+G+ AE + QL P N S AGL +N K K
Sbjct: 618 LGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVK 677
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +E +VH++ AGD SHP+++K++ + L ++K+ GY+P+T VLHDID+E
Sbjct: 678 KEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEE 737
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE L HSE+LA++ G+L++P IR+ KNLRVC DCH+A K ISKI RE+I+RDA
Sbjct: 738 EKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDA 797
Query: 757 KRFHHFKDGLCSCRDYW 773
+RFHHFKDG CSC DYW
Sbjct: 798 RRFHHFKDGTCSCGDYW 814
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL--SPLRVSTYNGILKMYSECDSMDDAFSVFS 469
F +++A + L K +H HV + S V+ N ++ MY +C + DA+ VF
Sbjct: 12 AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFD 71
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+TERD SW+++I+ + E A+ F G +P + + ACS L
Sbjct: 72 RITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNL 126
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
T S ++ A + + + +H +V + L + Y N ++ MYS + + +F
Sbjct: 321 TMSSIVPAYVRCEGISRKEGIHGYVIK--RGLETNRYLQNALIDMYSRMGDIKTSKRIFD 378
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF----------------KQAGLKPDDQI 513
+M +RD+ SW+T+IT + G DA+ + + KQ KP+
Sbjct: 379 SMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSIT 438
Query: 514 FIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSI----VDMLGSTGYLDEALE 568
+ V C++L + +G +H Y I + V++ VDM G L+ A
Sbjct: 439 LMTVLPGCASLSALAKGKEIH------AYAIRNLLASQVTVGSALVDMYAKCGCLNLARR 492
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV-PVNAS 627
++MP+ +V W ++ MHG G E+ E + + E +K G V P +
Sbjct: 493 VFDQMPIR-NVITWNVIIMAYGMHGK---GKESLELFEDM----VAEGAKGGEVKPTEVT 544
Query: 628 ELA 630
+A
Sbjct: 545 FIA 547
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
R + N ++ MY++ +DDA S+ +RDL +W++MI+ F++N +A+
Sbjct: 149 RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMV 208
Query: 504 QAGLKPDDQIFIGVFSACSAL 524
G+KPD F V ACS L
Sbjct: 209 LEGVKPDGVTFASVLPACSHL 229
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY- 448
+ EA+ L L+ + + D TF+ ++ AC L K +H + R + S
Sbjct: 196 RFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVG 255
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY C ++ VF ++ +R + W+ MI G+A++ E A+ +F + + A
Sbjct: 256 SALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAA-- 313
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G++S + + +V + E +S+ GI
Sbjct: 314 -------GLYSNATTMSSIVPAYVRCEGISRKEGI 341
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 210/372 (56%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+QAC AL+ + V + E ++ N ++ MYS C +D A+ VF
Sbjct: 224 TCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGT 283
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ + +W MI+G A NG G+DA+ F + ++ + PD+Q F GV SACS G V EG
Sbjct: 284 PQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGF 343
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE-KMPMEPDVDVWEKLMNLCR 590
F+ M +YG+ P+++HY IVD++G G LDEA E + +M + PD +W L+ CR
Sbjct: 344 RFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTNEMKVAPDATIWRTLLGACR 403
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ--------- 641
+HG+++LG+R + +L + + E +K E +KL +
Sbjct: 404 IHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEVRKLMQEKGIQTTPGC 463
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+E +V+E+ A D +HP +IY + + Q++ AGY+P LHD+D EGKE A
Sbjct: 464 TTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGYVPNVSSELHDLDSEGKESA 523
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA++ LL +P PIR+ KNLRVC DCH+ K+ S I R +I+RD RFHH
Sbjct: 524 LTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKVFSGIYNRLVIVRDRTRFHH 583
Query: 762 FKDGLCSCRDYW 773
F+ G CSC DYW
Sbjct: 584 FQGGKCSCNDYW 595
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 425 ALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
AL A+ +H +V E L ++T ++ Y+ D A +F M RD +W+ +
Sbjct: 134 ALAHARQLHANVVAEGHLRDALLAT--SLMACYANRGDGDGARKLFGEMPARDAVAWNVL 191
Query: 483 ITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
I+ A+N +DA+ +F + + +G +PDD I + AC++LG + G + +++
Sbjct: 192 ISCCARNRRTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGE-QVWAYAEE 250
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G +K S++ M G +D+A P + V W +++
Sbjct: 251 HGYGAKLKVRNSLIAMYSRCGCVDKAYRVFCGTP-QKSVVTWSAMIS 296
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 236/393 (60%), Gaps = 9/393 (2%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K ++A++V G + ++ + + +F+ + +C +AL+ + +H +L V N
Sbjct: 268 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 327
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY C +++D +F ++++++ SW+++I G A++G G A+ F+Q ++ ++P
Sbjct: 328 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 387
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D+ F G+ SACS G +G F+ S++ + HY +VD+LG +G L+EA E
Sbjct: 388 DEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEEL 447
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRLNEKSKAGLVP 623
I MP++ + VW L++ C MH LE+ +R A+ + L+P L+ +
Sbjct: 448 IRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRW 507
Query: 624 VNASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
+ S + +E + + + Q + + ++ +E+ +GD SHP +D+IY + L ++KE
Sbjct: 508 SDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKEL 567
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+ RF LHD++ E KE L HSERLA+ GL+S+ + I +MKNLRVCGDCHSA+
Sbjct: 568 GYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAI 627
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+I+KIV R++I+RD+ RFHHF DG CSC DYW
Sbjct: 628 KLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQ--C---ISVDLPTFSQLMQACGDAKALEEAKAVHEH 435
+ GL + G+ +EA LGL + C + T+ ++ AC +A AL + +H H
Sbjct: 156 MIGGLDQHGRSEEA---LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAH 212
Query: 436 VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDA 495
V +L ++ Y+ C M+D+ VF ++ W ++TG+ N EDA
Sbjct: 213 VFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDA 272
Query: 496 VDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ +F + + G+ P+ F ++C L + ++ + + G+ + S++
Sbjct: 273 LKVFGEMMREGVLPNQSSFTSALNSCCGL-EALDWGREIHTAAVKLGLETDVFVGNSLIV 331
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L++ + +++ + ++ W ++ C HG
Sbjct: 332 MYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHG 368
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R ++ +N ++ Y ++D +F M R++ SW +MI G ++G E+A+ +F
Sbjct: 115 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 174
Query: 501 QFKQAG--LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVD 555
Q G +KP + V +AC+ + +G+ +H Y S Y+S ++
Sbjct: 175 QMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGY----SFDAYISAALIT 230
Query: 556 MLGSTGYLDEALE-FIEKMPMEPDVDVWEKLMN 587
+ ++++L F K+ M +V +W L+
Sbjct: 231 FYANCKQMEDSLRVFHGKLHM--NVVIWTALVT 261
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N ++K +C + A +F M ER + SW TMI GF + G E A +F +
Sbjct: 57 VVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF 116
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+ + + G C+ G V +G+ F+ M ++ + S++ L G +
Sbjct: 117 RDIAAWNSMIYGY--CCN--GRVEDGLRLFQEMP-----CRNVISWTSMIGGLDQHGRSE 167
Query: 565 EALEFIEKM 573
EAL +M
Sbjct: 168 EALGLFRQM 176
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 219/372 (58%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T S ++ AC A +++ + H + + + ++ MYS ++D A VF
Sbjct: 503 TISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFER 562
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
T+RDL SW++MI+G+A++G A++ F Q + +G++ D F+ V C+ G VVEG
Sbjct: 563 QTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEG 622
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F+SM +D+ I P+M+HY +VD+ G LDE + I MP VW L+ CR
Sbjct: 623 QQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACR 682
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKL---------ASQ 641
+H N+ELG A+ + L+P + + A + + E +KL A
Sbjct: 683 VHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGC 742
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +++++KVH + A D SHP +D+IY ++ + ++K+ GY P T FVLHDI ++ KE
Sbjct: 743 SWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAM 802
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L+AHSERLA++ GL+++P P++I+KNLRVCGDCH +K++S I RE+I+RD RFHH
Sbjct: 803 LVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHH 862
Query: 762 FKDGLCSCRDYW 773
F G CSC D+W
Sbjct: 863 FNGGACSCGDFW 874
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ A AL+ + VH + V N ++ MY++C ++DA SVF+ M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+T++ G N +A+ +F + + K + V C+ L +
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S +G + ++ D G L +AL +V W +++ C
Sbjct: 323 -QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381
Query: 592 HGNLELG 598
+G++ L
Sbjct: 382 NGDIPLA 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 7/186 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ +++ C + K L A+ +H V + L + + YS+C + DA ++FS
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 472 T-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
T R++ SW +I+G +NG AV +FS+ ++ + P++ + + A + ++
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPP 420
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + + +Y +PS+ +++ G ++AL I KM + DV W +++
Sbjct: 421 QIHAQVIKTNYQHIPSVG--TALLASYSKFGSTEDALS-IFKMIEQKDVVAWSAMLSCHA 477
Query: 591 MHGNLE 596
G+ E
Sbjct: 478 QAGDCE 483
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 368 EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA--KA 425
E R G L + G V E ++ + + + VD T S +++AC +
Sbjct: 57 EIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRV 116
Query: 426 LEE------AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
L E K H+ E VS ++ MY +C S+ + VF M ++++ +W
Sbjct: 117 LGEQLHCLCVKCGHDRGE-------VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+++TG A + + + +F + + G+ P+ F V SA ++ G + G + S
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ-RVHAQSV 228
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+G S+ S+++M G +++A M D+ W LM
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLM 274
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S +L YS+ S +DA S+F + ++D+ +W M++ A+ G E A +F++
Sbjct: 436 SVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQ 495
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+KP++ V AC+ V+ F ++S Y ++ ++V M G +D
Sbjct: 496 GIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDS 555
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A E+ + D+ W +++ HG
Sbjct: 556 AQIVFERQT-DRDLVSWNSMISGYAQHG 582
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 225/393 (57%), Gaps = 16/393 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+++ ++K+ D T + L+ ACG ALE + +H + R + N ++
Sbjct: 839 EALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALI 897
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C S+ A +F + E+DL +W MI+G +GLG +A+ F + + AG+KPD+
Sbjct: 898 DMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEI 957
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F + ACS G + EG F SM + + P ++HY +VD+L TG L +A IE
Sbjct: 958 TFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIET 1017
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MP++PD +W L+ CR+H ++EL ++ AE V +L+P N L + A E K
Sbjct: 1018 MPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPD--NAGYYVLLANIYA-EAEKW 1074
Query: 633 KENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
+E KKL + + +EV+ K + + DT+HP+ I++L+ LR +MK
Sbjct: 1075 EEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNE 1134
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
G+ P+ R+ L + KE AL HSE+LA++ G+L+ P+ IR+ KNLRVC DCH
Sbjct: 1135 GHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMA 1194
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +SK RE+I+RD+ RFHHFKDG CSCRD+W
Sbjct: 1195 KFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 7/210 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+EG +AI + +E + +S D+ + + ++ AC +L++ + VH ++ + L +
Sbjct: 731 VREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCL 790
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY++C SM++A+ VFS + +D+ SW+TMI G++KN L +A+ +F++ ++
Sbjct: 791 PVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE 850
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV-SIVDMLGSTGYL 563
+PD + AC +L + G +H + Y S H +++DM G L
Sbjct: 851 S-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGY---SSELHVANALIDMYVKCGSL 906
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A + +P E D+ W +++ C MHG
Sbjct: 907 VHARLLFDMIP-EKDLITWTVMISGCGMHG 935
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G A+E + + VDL T + AC + +L +A+H +
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC 684
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N +L MYS+C +++DA F M ++ + SW ++I + + GL +DA+ +F
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+ PD V AC A G+ ++ + + + + +++DM
Sbjct: 745 EMESKGVSPDVYSMTSVLHAC-ACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKC 803
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++EA ++P++ D+ W ++
Sbjct: 804 GSMEEAYLVFSQIPVK-DIVSWNTMI 828
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K G +E+I + ++K I+ + TFS +++ + E K +H V +L +
Sbjct: 530 KIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNT 589
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ Y + +D A +F + +RD+ SW++MI+G NG A++ F Q
Sbjct: 590 VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ D + +AC+ +G + G LH + + + + +++DM G L++
Sbjct: 650 VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFS--REVMFNNTLLDMYSKCGNLND 707
Query: 566 ALEFIEKMPMEPDVDVWEKLM 586
A++ EKM + V W L+
Sbjct: 708 AIQAFEKMGQKTVVS-WTSLI 727
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 115/241 (47%), Gaps = 23/241 (9%)
Query: 366 FAEASRSSQNNGTLEQLD------GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQA 419
+ + RSS G +LD + G ++ A+E+L + +K +DL +S ++Q
Sbjct: 403 YLDVPRSSTRVGAFAKLDENTKICKFCEVGDLRNAVELLRMSQKS--ELDLNAYSSILQL 460
Query: 420 CGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN-MTERDLTS 478
C + K L+E K VH + P+ ++ MY C ++ + +F + +++ +
Sbjct: 461 CAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFL 520
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W+ M++ +AK G +++ +F + ++ G+ + F + + LG V E
Sbjct: 521 WNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE-------CK 573
Query: 539 KDYGIVPSMKH--YVSIVDMLGST----GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+ +G V + Y ++V+ L +T G +D A + +++ + DV W +++ C M+
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVMN 632
Query: 593 G 593
G
Sbjct: 633 G 633
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 231/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + K +EA+ + ++ I D T ++ AC L+ AK +H +V++
Sbjct: 51 MISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNG 110
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L L V+ N ++ MY++C ++ A VF M R++ SW +MI FA +G +A+
Sbjct: 111 LGGALPVN--NALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKF 168
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F Q K +KP+ F+GV ACS G V EG F SM+ ++ I P +HY +VD+ G
Sbjct: 169 FYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFG 228
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
L +ALE +E MP+ P+V +W LM C++HG ELG+ A+ V +L+P
Sbjct: 229 RANLLRDALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQ 288
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
S + K + L K++ K + +E+ ++V+E+ D H + DKIY
Sbjct: 289 LSNIYAKDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEK 348
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + ++K GY P TR VL D+++EGK+E +L HSE+LA+ +GL+ + IRI+KN
Sbjct: 349 LDEVVKELKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKN 408
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+ +K++SK+ G E+I+RD RFHH+K G+CSC DYW
Sbjct: 409 LRVCEDCHTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S + ++ YS ++DA +F M E+DL W MI+G+A++ ++A+++F
Sbjct: 9 ISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLF 68
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S+ + G+KPD + V SAC+ LG V++ G+ ++ +++DM
Sbjct: 69 SEMQVFGIKPDQVTILSVISACARLG-VLDRAKWIHMYVDKNGLGGALPVNNALIDMYAK 127
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G L A EKM +V W ++N +HG+
Sbjct: 128 CGNLGAARGVFEKMQ-SRNVISWTSMINAFAIHGD 161
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 220/383 (57%), Gaps = 11/383 (2%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L +Q ++ D T ++ AC AL+ + H + R + +L MY C
Sbjct: 190 LFRQMVATDEVTLLAVVSACSHLGALDTGRWAHAYHARTCRNTTRNLGTALLNMYMRCGD 249
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++ A+SVF M ++D+ +W MI G A NGL DA+ +F++ K G+ PD V SA
Sbjct: 250 VESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRDALKLFAEMKNIGVDPDSITMTAVLSA 309
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
CS G V EG + M +Y + P+++HY +VD+LG G L+EAL IE +P + DV
Sbjct: 310 CSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVVDLLGRAGQLEEALALIETVPFKADVA 369
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAG---LVPVNASELA 630
+W L+ CR H N+++G A + +LDP N + AG LV S +
Sbjct: 370 LWGALLVACRAHKNVDMGQMAAMEILKLDPHHAGACVFLSNAYAAAGKWDLVQEVRSSM- 428
Query: 631 KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
KE K +++E+ V+E+ +GD SHP++D+IYA++ + + G+ P T+ V
Sbjct: 429 KEHRIYKPPGSSIVELDGVVYEFLSGDHSHPQSDRIYAMLDEVCKTLSLKGHRPSTKEVA 488
Query: 691 HDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRE 750
DID+E KE + HSE+LA++ GL+S+ A IRI+KNLR+C DCHS +KI+S++ R
Sbjct: 489 FDIDEEDKEVCISQHSEKLALALGLISTRRGAVIRIVKNLRICEDCHSVMKIVSEVYDRV 548
Query: 751 LIIRDAKRFHHFKDGLCSCRDYW 773
+++RD RFHHFK+G CSC DYW
Sbjct: 549 IVVRDRNRFHHFKNGSCSCLDYW 571
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 238/411 (57%), Gaps = 27/411 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V GK ++ ++ L+ ++ + VD+ T + ++ AC +A LE + VH +V+++
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI- 668
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
R+ Y G ++ MYS+ S+DDA+ VF E ++ W +MI+G+A +G G A+ +
Sbjct: 669 -GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGL 727
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+ P++ F+GV +ACS G + EG +F M Y I P ++H S+VD+ G
Sbjct: 728 FEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYG 787
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------- 611
G+L + FI K + VW+ ++ CR+H N+E+G +E++ Q+ PS
Sbjct: 788 RAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVL 847
Query: 612 ---------RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPE 662
R +E ++ L ++ KK Q+ ++++ ++H + GD SHP+
Sbjct: 848 LSNMCASNHRWDEAAR-------VRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQ 900
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
D+IY+ + L ++KE GY + + V+ D+++E E + HSE+LAV G++++ R
Sbjct: 901 DDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRT 960
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIRI+KNLR+C DCH+ +K S+++ RE+I+RD RFHHFK G CSC DYW
Sbjct: 961 PIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DGL++ G + A+E L + + TFS + +E + +H V +
Sbjct: 494 VDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGF 553
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMT----------------ERDLTSWDTMITG 485
+ +++MY +C MD A + ++ + + SW +M++G
Sbjct: 554 DSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSG 613
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ NG ED + F + + D + + SAC+ G ++E H + + G
Sbjct: 614 YVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAG-ILEFGRHVHAYVQKIG--H 670
Query: 546 SMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ YV S++DM +G LD+A + + EP++ +W +++ +HG
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAW-MVFRQSNEPNIVMWTSMISGYALHG 719
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S +++ C L+ K VH + R + V N IL +Y +C + A +F M
Sbjct: 392 TLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELM 451
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
E D+ SW+ MI + + G E ++D+F +
Sbjct: 452 NEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL 482
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y++ ++M A +F + +R+ +W +I+GFA+ G E ++F + + G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 509 PDDQIFIGVFSACS 522
P+ V CS
Sbjct: 388 PNQYTLSSVLKCCS 401
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 222/390 (56%), Gaps = 11/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + + D T + +++AC LE + H HV + L ++ N +L
Sbjct: 467 EALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILN--NALL 524
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C S++DA +F+ M ++D+ SW TMI G A+NG +A+++F K G KP+
Sbjct: 525 DMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHI 584
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+GV ACS G V EG +F SM+ YGI P +HY ++D+LG LD+ ++ I +
Sbjct: 585 TILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHE 644
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVP 623
M EPDV W L++ CR N++L A+ + +LDP S + SK
Sbjct: 645 MNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDV 704
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
K++ +K + +EV ++H + GD SHP+ D+I + ++ AGY+
Sbjct: 705 AEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYV 764
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T FVL D++ E +E++L HSE+LA+ G++S P IRI KNL++CGDCH K+I
Sbjct: 765 PDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLI 824
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+++ R ++IRD R+HHF+DG+CSC DYW
Sbjct: 825 AELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+ VL +E++ + D T+S+L++ C A+ E K VH H+ + N ++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY + + +++A +F M ER++ SW TMI+ ++ L + A+ + + + G+ P+
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F V AC L D+ + LH S G+ + +++D+ G L EAL+ +M
Sbjct: 389 FSSVLRACERLYDLKQ--LH--SWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444
Query: 574 PMEPDVDVWEKLM 586
M D VW ++
Sbjct: 445 -MTGDSVVWNSII 456
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
A+ +L + + + ++ TFS +++AC + L + K +H + ++ V + ++
Sbjct: 369 RAMRLLAFMFRDGVMPNMFTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDVFVRSALI 425
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
+YS+ + +A VF M D W+++I FA++ G++A+ ++ ++ G D
Sbjct: 426 DVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQS 485
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC++L + G H + D ++ + +++DM G L++A +FI
Sbjct: 486 TLTSVLRACTSLSLLELGRQAHVHVLKFDQDLILNN----ALLDMYCKCGSLEDA-KFIF 540
Query: 572 KMPMEPDVDVWEKLM 586
+ DV W ++
Sbjct: 541 NRMAKKDVISWSTMI 555
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 219/372 (58%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T S ++ AC A +++ + H + + + ++ MYS ++D A VF
Sbjct: 503 TISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFER 562
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
T+RDL SW++MI+G+A++G A++ F Q + +G++ D F+ V C+ G VVEG
Sbjct: 563 QTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEG 622
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F+SM +D+ I P+M+HY +VD+ G LDE + I MP VW L+ CR
Sbjct: 623 QQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACR 682
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKL---------ASQ 641
+H N+ELG A+ + L+P + + A + + E +KL A
Sbjct: 683 VHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGC 742
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +++++KVH + A D SHP +D+IY ++ + ++K+ GY P T FVLHDI ++ KE
Sbjct: 743 SWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAM 802
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L+AHSERLA++ GL+++P P++I+KNLRVCGDCH +K++S I RE+I+RD RFHH
Sbjct: 803 LVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHH 862
Query: 762 FKDGLCSCRDYW 773
F G CSC D+W
Sbjct: 863 FNGGACSCGDFW 874
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ A AL+ + VH + V N ++ MY++C ++DA SVF+ M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+T++ G N +A+ +F + + K + V C+ L +
Sbjct: 263 ETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALAR 322
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S +G + ++ D G L +AL +V W +++ C
Sbjct: 323 -QLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381
Query: 592 HGNLELG 598
+G++ L
Sbjct: 382 NGDIPLA 388
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 368 EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA--KA 425
E R G L + G V E ++ + + + VD T S +++AC +
Sbjct: 57 EIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRV 116
Query: 426 LEE------AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
L E K H+ E VS ++ MY +C S+ + VF M ++++ +W
Sbjct: 117 LGEQLHCLCVKCGHDRGE-------VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+++TG A + + + +F + + G+ P+ F V SA ++ G + G + S
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ-RVHAQSV 228
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+G S+ S+++M G +++A M D+ W LM
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLM 274
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ +++ C + K L A+ +H V + L + + YS+C + DA ++FS
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 472 T-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
T R++ SW +I+G +NG AV +FS+ ++ + P++ + + A + ++
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPP 420
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + + +Y +P + +++ G ++AL I KM + DV W +++
Sbjct: 421 QIHAQVIKTNYQHIPFVG--TALLASYSKFGSTEDALS-IFKMIEQKDVVAWSAMLSCHA 477
Query: 591 MHGNLE 596
G+ E
Sbjct: 478 QAGDCE 483
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L YS+ S +DA S+F + ++D+ +W M++ A+ G E A +F++ G+K
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P++ V AC+ V+ F ++S Y ++ ++V M G +D A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHG 593
E+ + D+ W +++ HG
Sbjct: 559 VFERQT-DRDLVSWNSMISGYAQHG 582
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 244/442 (55%), Gaps = 32/442 (7%)
Query: 348 QNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
+NG++ A +V H +D + ++ + G + G+ EA+ + ++
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSA----------MISGFAQNGQSDEALRLFRNMQASG 305
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL-----KMYSECDS 460
I D + AC + L+ ++VH + R +N IL MYS+C S
Sbjct: 306 IQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD------FNCILGTAAIDMYSKCGS 359
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F+ +++RDL W+ MI +G G+DA+ +F + + G++PD F + SA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
S G V EG L F M + I P+ KHYV +VD+L +G ++EA + + M EP V
Sbjct: 420 LSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVA 479
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAK 631
+W L++ C + LELG+ A+ + +L P S L +K +L K
Sbjct: 480 IWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMK 539
Query: 632 EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
+ +KK+ + +E+R H + D SHP+ ++I + + L +M++ GYIP T FV H
Sbjct: 540 DSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYH 599
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGREL 751
D+++E KE+ L HSERLA++ GLL++ + I+KNLRVCGDCH A+K ISKI RE+
Sbjct: 600 DLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREI 659
Query: 752 IIRDAKRFHHFKDGLCSCRDYW 773
++RDAKRFHHFKDG+CSCRDYW
Sbjct: 660 VVRDAKRFHHFKDGVCSCRDYW 681
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V G+ +AI++ + + + D ++QAC A+ + +VH H+ R +
Sbjct: 183 GFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRM 242
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V T ++ MY++ +D A VF M R+ SW MI+GFA+NG ++A+ +F +
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LH-FESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++PD + ACS +G + G +H F D+ + + +DM G
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILG----TAAIDMYSKCG 358
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
L A + + M + D+ +W ++ C HG
Sbjct: 359 SLASA-QMLFNMISDRDLILWNAMIACCGAHGR 390
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ + AC L ++V + V + +L +Y+ +M DA VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA----- 523
M RD +W TM+ GF G DA+ ++ + ++ G+K D+ + IGV AC+A
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+G V G L M D +V + S+VDM G LD A M DV W
Sbjct: 227 MGASVHGHLLRHGMRMD--VVTA----TSLVDMYAKNGLLDVACRVFGLMVHRNDVS-WS 279
Query: 584 KLMN 587
+++
Sbjct: 280 AMIS 283
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 209/372 (56%), Gaps = 10/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+QAC AL+ + V + E + N ++ MY C +D A+ VFS
Sbjct: 240 TCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGT 299
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ + +W MI+G A NG G DA+ +F + ++ + PD+Q F GV SACS G V EG
Sbjct: 300 PQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGF 359
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE-KMPMEPDVDVWEKLMNLCR 590
F+ M +YG+ P+++HY IVD++G G LDEA EF+ +M + PD +W L+ CR
Sbjct: 360 RFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACR 419
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQ--------- 641
+HG+++LG+R + +L + + E +K E +KL +
Sbjct: 420 IHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPGC 479
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+E VHE+ A D +HP +IY + + Q++ AGY+P LHD+D EGKE A
Sbjct: 480 TTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVPNVSSELHDLDSEGKESA 539
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA++ LL +P PIR+ KNLRVC DCH+ K+ S I R +I+RD RFHH
Sbjct: 540 LTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFSAIYRRIVIVRDRTRFHH 599
Query: 762 FKDGLCSCRDYW 773
F+ G CSC DYW
Sbjct: 600 FQGGKCSCNDYW 611
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAG 506
+++ Y+ D A +F M RD +W+ +IT +A+N +DA+ +F + K +
Sbjct: 174 TSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALKLFEEMRGKDSE 233
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+PDD I + ACS+LG + G + ++++G +K S++ M G +D+A
Sbjct: 234 SEPDDVTCILLLQACSSLGALDFGE-QVWAYAEEHGYGGELKVRNSLITMYLRCGCVDKA 292
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
P + V W +++
Sbjct: 293 YRVFSGTP-QKSVVTWTAMIS 312
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 241/428 (56%), Gaps = 16/428 (3%)
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCIS-VDLPTFSQLM 417
C+ D F +A + + T + GL++ G + + + ++ I VD S ++
Sbjct: 187 KCEAMDLFLQAPVRNLFSWT-ALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
C + LE K +H V L + N ++ MY++C + A +F M +D+
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
SW ++I G A++G E+A+ ++ + + +KP++ F+G+ ACS G V G F SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
+ DY I PS++HY ++D+L +G+LDEA ++K+P +PD W L++ C H NLE+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425
Query: 598 GDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSK-------- 649
G R A+ V L P + V A + +KL S +EVR +
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSS--MEVRKEPGYSSIDF 483
Query: 650 ---VHEYRAGDTS-HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
+ AG++ HP ++I L++ L A+M++ GY+P T FVL+DI+Q+ KE+ L H
Sbjct: 484 GKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWH 543
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SERLAV++GLL + IRI+KNLR+CGDCH+ LK IS IV RE+++RDA R+HHFK+G
Sbjct: 544 SERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEG 603
Query: 766 LCSCRDYW 773
CSC D+W
Sbjct: 604 KCSCNDFW 611
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F +Q C ++ A +H + + N +L +Y +C + A +F M
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
RD SW +++T K + + + + F GL+PD +F + ACS+LG + G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 531 MLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+H M + +V S S++DM G DEA + + + V W +++
Sbjct: 126 QVHARFMLSXFCDDEVVKS-----SLIDMYTKCGQPDEARAVFDSILFKNSVS-WTSMIS 179
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPL--RVSTYNGILKMYSECDSMDDAFSVFS 469
F+ +++AC L K VH +LS + ++ MY++C D+A +VF
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARF--MLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFD 164
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ ++ SW +MI+G+A++G +A+D+F Q
Sbjct: 165 SILFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 427 EEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
+EA+AV + + S S +G + +C++MD +F R+L SW +I+G
Sbjct: 157 DEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD----LFLQAPVRNLFSWTALISGL 212
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFI-GVFSACSALGDVVEGMLHFESMSKDYGIVP 545
++G G + +F++ ++ G+ D + + V C+ L ++E + G
Sbjct: 213 IQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA-LLELGKQIHGLVIALGFES 271
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
+ ++VDM + A + +MP DV W ++ HG E +
Sbjct: 272 CLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAE---EALTLY 327
Query: 606 EQLDPSRL--NEKSKAGLV 622
+++ SR+ NE + GL+
Sbjct: 328 DEMVLSRIKPNEVTFVGLL 346
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 231/396 (58%), Gaps = 13/396 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +EA++++ + I +D +FS G+ L+E + +H + +
Sbjct: 541 GPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVL 600
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N + MY +C +DD F + R SW+ +I+ A++G + A + F + GL+
Sbjct: 601 NATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLR 660
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+ + SACS G V EG+ +F SMS +G+ ++H V I+D+LG G L EA
Sbjct: 661 PDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAEN 720
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
FI KMP+ P VW L+ C++HGNLEL + A+ + +LD S ++ + V AS
Sbjct: 721 FINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSS--DDSAYVLYSNVCAST 778
Query: 628 ELAKEKEN--KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
++ EN K++ S N+ ++++++V + GD HP+ +IYA + L+ +
Sbjct: 779 RRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKII 838
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
+EAGY+P+T + L D D+E KE L HSER+A++ GL++S +P+RI KNLRVCGDCH
Sbjct: 839 REAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCH 898
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S K++S+I+GR++I+RDA RFHHF G CSC DYW
Sbjct: 899 SVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 17/227 (7%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
DD E S N+ + V G ++++E + D T S L+ CG A
Sbjct: 219 DDMKERDTISWNS----IITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSA 274
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ L + +H V + V N +L MYS+ +DA VF M ERDL SW++M+
Sbjct: 275 QNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMM 334
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
NG A+++ + Q + F SAC L + + + I
Sbjct: 335 ASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL--------KIVHAFVI 386
Query: 544 VPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ + H + ++V M G G + A + MP +V W L+
Sbjct: 387 LLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEV-TWNALI 432
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G G VKE + V L + + + + ++++CG V V +
Sbjct: 134 GYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDT 193
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS N ++ M+ CDS+++A VF +M ERD SW+++IT NG E +++ FSQ +
Sbjct: 194 TVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMR 253
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
K D + C + ++ G LH M G+ ++ S++ M G
Sbjct: 254 YTHAKTDYITISALLPVCGSAQNLRWGRGLH--GMVVKSGLESNVCVCNSLLSMYSQAGK 311
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
++A EF+ E D+ W +M
Sbjct: 312 SEDA-EFVFHKMRERDLISWNSMM 334
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+ S++ A VF M ER+ SW+ +++GF + G + A+ F + G++P +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ +AC G + EG + G+ + S++ G+ G++ E ++ + K
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAE-VDMVFKE 119
Query: 574 PMEPDVDVWEKLM 586
EP++ W LM
Sbjct: 120 IEEPNIVSWTSLM 132
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 7/234 (2%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D E + +S NN + G V+ G ++A++ + + + + L+ AC +
Sbjct: 16 DKMPERNEASWNN----LMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRS 71
Query: 424 KALEE-AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
+ E A VH HV + V +L Y + + VF + E ++ SW ++
Sbjct: 72 GCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSL 131
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
+ G+A NG ++ + ++ + ++ G+ ++ V +C L D + G S+ K G
Sbjct: 132 MVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKS-G 190
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ ++ S++ M G+ ++EA + M E D W ++ +G+ E
Sbjct: 191 LDTTVSVANSLISMFGNCDSIEEASCVFDDMK-ERDTISWNSIITASVHNGHCE 243
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQA-CGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
AIE LL ++ + V+ T L+ A L+ +H H+ L + ++
Sbjct: 444 AIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLI 503
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C ++ + +F + ++ ++W+ +++ A G GE+A+ + + + G+ D
Sbjct: 504 TMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQF 563
Query: 513 IFIGVFSACSALGDVVEG-MLH-------FESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
F + L + EG LH FE S DY + +M DM G G +D
Sbjct: 564 SFSVAHAIIGNLTLLDEGQQLHSLIIKHGFE--SNDYVLNATM-------DMYGKCGEID 614
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ + + P W L++ HG
Sbjct: 615 DVFRILPQ-PRSRSQRSWNILISALARHG 642
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G A+E+L + + + + TF+ + AC + LE K VH V L +
Sbjct: 338 VDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN---LETLKIVHAFVILLGLHHNL 394
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY + SM A V M +RD +W+ +I G A N A++ F+ ++
Sbjct: 395 IIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREE 454
Query: 506 GLKPDDQIFIGVFSACSALGDVVE 529
G+ + + + SA + D+++
Sbjct: 455 GVPVNYITIVNLLSAFLSPDDLLD 478
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 241/428 (56%), Gaps = 16/428 (3%)
Query: 359 NCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCIS-VDLPTFSQLM 417
C+ D F +A + + T + GL++ G + + + ++ I VD S ++
Sbjct: 187 KCEAMDLFLQAPVRNLFSWT-ALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
C + LE K +H V L + N ++ MY++C + A +F M +D+
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
SW ++I G A++G E+A+ ++ + + +KP++ F+G+ ACS G V G F SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
+ DY I PS++HY ++D+L +G+LDEA ++K+P +PD W L++ C H NLE+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425
Query: 598 GDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSK-------- 649
G R A+ V L P + V A + +KL S +EVR +
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSS--MEVRKEPGYSSIDF 483
Query: 650 ---VHEYRAGDTS-HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
+ AG++ HP ++I L++ L A+M++ GY+P T FVL+DI+Q+ KE+ L H
Sbjct: 484 GKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWH 543
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SERLAV++GLL + IRI+KNLR+CGDCH+ LK IS IV RE+++RDA R+HHFK+G
Sbjct: 544 SERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEG 603
Query: 766 LCSCRDYW 773
CSC D+W
Sbjct: 604 KCSCNDFW 611
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F +Q C ++ A +H + + N +L +Y +C + A +F M
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
RD SW +++T K + + + + F GL+PD +F + ACS+LG + G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 531 ------MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
ML F D +V S S++DM G D+A + + + V W
Sbjct: 126 QVHARFMLSFFC---DDEVVKS-----SLIDMYTKCGQPDDARAVFDSILFKNSVS-WTS 176
Query: 585 LMN 587
+++
Sbjct: 177 MIS 179
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F+ +++AC L K VH + ++ MY++C DDA +VF ++
Sbjct: 107 VFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSI 166
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ SW +MI+G+A++G +A+D+F Q
Sbjct: 167 LFKNSVSWTSMISGYARSGRKCEAMDLFLQ 196
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 427 EEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGF 486
++A+AV + + S S +G + +C++MD +F R+L SW +I+G
Sbjct: 157 DDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMD----LFLQAPVRNLFSWTALISGL 212
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFI-GVFSACSALGDVVEGMLHFESMSKDYGIVP 545
++G G + +F++ ++ G+ D + + V C+ L ++E + G
Sbjct: 213 IQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLA-LLELGKQIHGLVIALGFES 271
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV 605
+ ++VDM + A + +MP DV W ++ HG E +
Sbjct: 272 CLFISNALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAE---EALTLY 327
Query: 606 EQLDPSRL--NEKSKAGLV 622
+++ SR+ NE + GL+
Sbjct: 328 DEMVLSRIKPNEVTFVGLL 346
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/493 (32%), Positives = 256/493 (51%), Gaps = 33/493 (6%)
Query: 304 GIHQNSPSFYQQDQNGGQYQW-DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLN---N 359
GI NS +F + W D+ R +++ + G + + +A+ ++N
Sbjct: 153 GISPNSITFIELLGAVAALSWLDRGRALHRR-------IACCGFLADIFVANCLINMYAK 205
Query: 360 CKHEDDFAEASRSSQNNGTLEQ---LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
C+ D S + + + G ++A++V L+ + TF +
Sbjct: 206 CRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTV 265
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ C D + VH ++ S V N ++ MY +C S D+A VF M +D+
Sbjct: 266 VDVCADIAVFGIGREVHGVIDAR-SEANVCVGNALINMYGKCASPDEARKVFDAMQRKDI 324
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQA-----GLKPDDQIFIGVFSACSALGDVVEGM 531
+W++MI + +NG G A++I+ + +++ G+ DD FIGV ACS G V +
Sbjct: 325 ITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSC 384
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ SM DYG P+ ++D+LG G+LDEA EFI MP PD +W L+ C
Sbjct: 385 KLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACIT 444
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-----------SELAKEKENKKLAS 640
H ++E R A+ + L P+ + S L + A +L ++ K+A
Sbjct: 445 HADVERAARAADRIMALRPT--DSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAG 502
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
++ +E+ +HE+ AGDTSHP +IY +R + ++E GY+P+ + VLH+ +E KE+
Sbjct: 503 KSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEK 562
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
HSERLA++ G++SSP +RIMKNLRVC DCHSA KIISK GR++I+RDA RFH
Sbjct: 563 MCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFH 622
Query: 761 HFKDGLCSCRDYW 773
F++G CSC DYW
Sbjct: 623 EFRNGSCSCEDYW 635
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +A+ +L +++ + IS + TF +L+ A L+ +A+H + +
Sbjct: 137 GHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVA 196
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C S+ DA SVF ++T R + +W ++ +A NG DA+ +F G++
Sbjct: 197 NCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVE 256
Query: 509 PDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
P + F+ V C+ +G V G++ ++ S+ V + ++++M G
Sbjct: 257 PTEVTFVTVVDVCADIAVFGIGREVHGVI--DARSEANVCVGN-----ALINMYGKCASP 309
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
DEA + + M D+ W ++ + +G G + EI +++ SR+
Sbjct: 310 DEARKVFDAMQ-RKDIITWNSMIAV---YGQNGYGFQALEIYKRMQESRMT 356
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F + Q LE+LD +++A++ LLE + +S + ++ CG A
Sbjct: 23 FPLTEKEEQQIDRLERLD-------LRDAVQ---LLEDRSVSPSAEVLAWYLRRCGSEAA 72
Query: 426 LEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ E K +H H+ +L + S Y N +++MY +C S+ A SVF R++ SW M+
Sbjct: 73 IAEGKRIHYHI--VLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMV 130
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
FA NG DA+++ G+ P+ FI + A +AL
Sbjct: 131 AAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAAL 171
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 248/454 (54%), Gaps = 23/454 (5%)
Query: 339 QYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ--------LDGLVKEGK 390
+Y + +G ++N +A+ +++ + A S +G LE+ + G G
Sbjct: 233 EYITENGMVRNVFVATALVDFYGKCGNMERAR--SVFDGMLEKNIVSWSSMIQGYASNGL 290
Query: 391 VKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--RLLSPLRVSTY 448
KEA+++ + + + D ++ +C ALE + L + T
Sbjct: 291 PKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGT- 349
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C MD A+ VF M ++D W+ I+G A +G +DA+ +F Q +++G+K
Sbjct: 350 -ALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIK 408
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+G+ AC+ G V EG +F SM + + P ++HY +VD+LG G LDEA +
Sbjct: 409 PDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQ 468
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKA 619
I+ MPME + VW L+ CR+H + +L + + + L+P S + S
Sbjct: 469 LIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHK 528
Query: 620 GLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
+ E+ KK+ + +EV VH++ GDTSHP ++KIYA + L +K
Sbjct: 529 WEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKA 588
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY+P T VL DI++E KE + HSE+LAV+ GL+S+ I ++KNLRVCGDCH A
Sbjct: 589 AGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEA 648
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K IS+I GRE+I+RD RFH F DGLCSC+DYW
Sbjct: 649 IKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V GK +EAI++ L + + D + +++ AC L + + E++
Sbjct: 181 ISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGM 240
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ Y +C +M+ A SVF M E+++ SW +MI G+A NGL ++A+D+F +
Sbjct: 241 VRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFK 300
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
GLKPD +GV +C+ LG + G ++ + + S+ +++DM G
Sbjct: 301 MLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG-TALIDMYAKCG 359
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+D A E M + D VW ++ M G+++
Sbjct: 360 RMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHVK 393
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV +E+IE+ + K+ +S D TF +++AC E +H V +
Sbjct: 79 MIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAG 138
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ +Y++C +D+AF VF ++ +++ SW I+G+ G +A+D+F
Sbjct: 139 CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GL+PD + V SAC GD+ G E ++++ G+V ++ ++VD G
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITEN-GMVRNVFVATALVDFYGKC 257
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A + M +E ++ W ++
Sbjct: 258 GNMERARSVFDGM-LEKNIVSWSSMI 282
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
L+ K +H + RL N +L+ + + +F + E ++ ++TMI
Sbjct: 22 CLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIR 81
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
G N +++++I+ ++ GL PD F V AC+ + D G + S+ G
Sbjct: 82 GLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELG-VKMHSLVVKAGCE 140
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+S++++ G++D A + + +P
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIP 170
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 233/404 (57%), Gaps = 11/404 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK + +A+EV + + + ++ + + AC A AL + VH VE+
Sbjct: 202 MMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSG 261
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ MY +C +++A+ VF + + LT+W+ MI GFA +G G+DA+ +
Sbjct: 262 IQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKL 321
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + ++ G+ PDD + V +AC+ G + EG +F + + YGI P M+HY +VD+ G
Sbjct: 322 FGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYG 381
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------ 612
G L+EA + I+ MPMEPDV V L ++HG+++LG+ V +LDP
Sbjct: 382 RAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVL 441
Query: 613 -LNEKSKAGLVP--VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG L E+ K A ++++EV+ +V E++ G HP +++YA+
Sbjct: 442 LANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEEVYAM 501
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ +++ GY+P+TR VLH I +E KE LL HSE+LA++ GLL + +RI KN
Sbjct: 502 ASDMMRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKN 561
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH A K +S++ R++++RD RFHHFKDG CSC+DYW
Sbjct: 562 LRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ G+LK+ DDA +F M ER+L SW+ M++G+ K DA+++F + +
Sbjct: 170 TMVGGLLKL----GLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRAR 225
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+ + + AC+ G + G + GI K ++VDM G ++E
Sbjct: 226 GVDGNVFVAATAVVACTGAGALARGR-EVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEE 284
Query: 566 ALEFIEKMPMEPD-VDVWEKLMNLCRMHGN 594
A E +P+ + W ++ +HG
Sbjct: 285 AWRVFEALPLAAKGLTTWNCMIGGFAVHGR 314
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 233/404 (57%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +E+I + L+ + D T L+ +C AL+ +H++ +
Sbjct: 262 ISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGF 321
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V ++ MY+ C ++ A VF +M ER++ +W MI+G+ +G G A+++F++
Sbjct: 322 DLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTE 381
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G +P++ F+ V SAC+ G + +G F SM + YG+VP ++H V +VDM G G
Sbjct: 382 MRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAG 441
Query: 562 YLDEALEFIEK-MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
L++A +FI+K +P EP VW ++ CRMH N +LG + AE V ++P
Sbjct: 442 LLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLS 501
Query: 614 NEKSKAGLVPVNASELAK----EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG ++ E+ + + KK + +E+ K + + GD SHP+T+ IY
Sbjct: 502 NIYALAG--RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRY 559
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L + E+GY+P ++HD+++E ++ AL HSE+LA++ GLL + IRI+KN
Sbjct: 560 LDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKN 619
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCHSA+K IS I RE+I+RD RFHHFKDG CSC DYW
Sbjct: 620 LRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ +++AC D AL K +H HV + ++ +Y++ M A VF M
Sbjct: 191 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 250
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+R + +W+++I+G+ +NGL ++++ +F ++G +PD + + S+CS L G
Sbjct: 251 PQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQL-----GA 305
Query: 532 LHFESMSKDY----GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
L F DY G ++ S+++M G + +A E + M E +V W +++
Sbjct: 306 LDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMIS 364
Query: 588 LCRMHG 593
MHG
Sbjct: 365 GYGMHG 370
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 220/375 (58%), Gaps = 10/375 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + ++ AC ALE K +H ++ R N ++ +Y +C + A +F
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 352
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +DL SW MI G+ +G G +A+ F++ + AG++PD+ FI + ACS G +
Sbjct: 353 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 412
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G F M D+ I P ++HY +VD+L TG L +A +FIE +P+ PD +W L+
Sbjct: 413 QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL-----AKEKENKKLASQN- 642
CR++ ++EL ++ AE V +L+P + A + +EK KK +N
Sbjct: 473 CRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNP 532
Query: 643 ---LLEVRSKVHEYRAGD-TSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+E++ +V+ + +G+ +SHP + KI +L++ +R +MKE GY P+T++ L + D+ K
Sbjct: 533 GCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQK 592
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GLL+ P R IR+ KNLRVCGDCH K +SK RE+++RD+ R
Sbjct: 593 EMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNR 652
Query: 759 FHHFKDGLCSCRDYW 773
FHHFKDG CSCR +W
Sbjct: 653 FHHFKDGYCSCRGFW 667
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G + + + + I VDL T ++ C + L KAVH +
Sbjct: 84 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
R++ N +L MYS+C +D A VF M ER++ SW +MI G+ ++G + A+ +
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
Q ++ G+K D + AC+ G + G
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNG 233
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ A +F + +RD+ SW++MI+G+ NGL E + I+ Q G+ D I V C
Sbjct: 64 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 123
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEP 577
+ G L I S + + +++DM G LD AL EKM E
Sbjct: 124 AK-----SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ER 177
Query: 578 DVDVWEKLM 586
+V W ++
Sbjct: 178 NVVSWTSMI 186
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 234/396 (59%), Gaps = 13/396 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ +EA+ + L++ + + V+ + ++ AC AL++ + H ++ER
Sbjct: 219 MISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNK 278
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ +Y++C MD A VF M E+++ +W + + G A NG GE + +FS
Sbjct: 279 IKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFS 338
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
KQ G+ P+ F+ V CS +G V EG HF+SM ++GI P + HY +VD+
Sbjct: 339 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARA 398
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L++A+ I++MPM+ VW L++ RM+ NLELG ++ + +L+ S N +
Sbjct: 399 GRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETS--NHGAYVL 456
Query: 621 LVPV--------NASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + N S + + ++K + Q +++EV +VHE+ GD SHP+ ++I A+
Sbjct: 457 LSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAV 516
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ AGY +T V+ DID+E KE+AL HSE+ A++ G++S A PIRI+KN
Sbjct: 517 WKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKN 576
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
LRVCGDCH +ISKI RE+I+RD RFHHFKDG
Sbjct: 577 LRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDG 612
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 239/430 (55%), Gaps = 18/430 (4%)
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
++++CK +D + + S N + L +GL +EG + + + D TF
Sbjct: 688 LISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEG-----LAYFNMSRWVGLKPDQATFL 742
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+++ C D + ++ +H + +L +Y++ ++D+ +VF +T
Sbjct: 743 AVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSP 802
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
D +W M+ +A +G G DA+ F GL PD F + +ACS G V EG +F
Sbjct: 803 DSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYF 862
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
E+MSK Y I P + HY +VD++G +G L +A I++MPMEP VW L+ CR++ +
Sbjct: 863 ETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 922
Query: 595 LELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASE---LAKEKENKKLASQNLL 644
+LG + A+ + +L+P N S +GL +AS L K+K + + + +
Sbjct: 923 TQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWK-DASRIRNLMKQKGLVRASGYSYI 981
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALL 703
E +K+H++ GD SHPE++KI ++ +R +MK E G+ T FVLHD+D++ KEE +
Sbjct: 982 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMIN 1041
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE++A++ GLL PI I KNLR+CGDCH K IS I R +IIRD+KRFHHF
Sbjct: 1042 QHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFL 1101
Query: 764 DGLCSCRDYW 773
+G CSCRDYW
Sbjct: 1102 EGSCSCRDYW 1111
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ AC EE +H V + V N ++ +Y + + + +F ++
Sbjct: 639 TFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDL 698
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV---- 527
+ ++L SW+TMI +NGL E+ + F+ + GLKPD F+ V C +G V
Sbjct: 699 SVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQ 758
Query: 528 -VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL-DEALEFIEKMPMEPDVDVWEKL 585
+ G++ F + + I ++ +D+ G L D + F+E PD W +
Sbjct: 759 GIHGLIMFCGFNANTCITTAL------LDLYAKLGRLEDSSTVFLE--ITSPDSMAWTAM 810
Query: 586 MNLCRMHG 593
+ HG
Sbjct: 811 LAAYATHG 818
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
+ C + A +F M E+D +W+ MI+G+A+ G +A+++F + G+K + I
Sbjct: 193 ARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMI 252
Query: 516 GVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
V SAC+ LG + +G + ++ I +++ ++VD+ G +D+A+E M
Sbjct: 253 SVLSACTQLGALDQGRWAHSYIERN-KIKITVRLGTTLVDLYAKCGDMDKAMEVFWGME- 310
Query: 576 EPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
E +V W +N M+G G++C ++
Sbjct: 311 EKNVYTWSSALNGLAMNG---FGEKCLKL 336
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 221/374 (59%), Gaps = 15/374 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC AL + K +H ++ R L VS N ++ MY +C ++ +F+ +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 472 -TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R++ SW+++I+G+ +G G +++ +F + + G+ P+ F+ V ACS +G V +G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
FESM +Y + P +HY +VD+LG G LDEA+E I+ M ++P VW L+ CR
Sbjct: 580 KKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-----------SELAKEKENKKLA 639
+HG++E + + L+P N + L + A EL +E +K+
Sbjct: 639 IHGHVEYAEMACSHLFDLEPR--NAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVP 696
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +EV+ K++ + + D +P+ +++ ALI QMK GY+P+TR VL+DI++E KE
Sbjct: 697 GCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKE 756
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
LL HSE+LAV+ GL+ + + IRI KNLR+C DCHS K ISK RE+++RD RF
Sbjct: 757 RILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRF 816
Query: 760 HHFKDGLCSCRDYW 773
HHF++G+CSCRDYW
Sbjct: 817 HHFRNGVCSCRDYW 830
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE-----EAKAVHEHVERLLSPLRVS 446
+EA+ L + + + VD +++ ++AC A A + +H H R L
Sbjct: 332 EEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTH 391
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQ 504
++ Y++ + A VF++M +R+L SW MI +AKN DA+ IF +
Sbjct: 392 VATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASD 451
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
A L P+ + V AC+ + + +G +LH + + + ++ S+ + +++ M G L
Sbjct: 452 ADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLN--ALMAMYMKCGCL 509
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ + +V W L++ MHG
Sbjct: 510 ETGRYIFNWIGRRRNVVSWNSLISGYGMHG 539
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 253/448 (56%), Gaps = 20/448 (4%)
Query: 344 SGNIQNGMMASQVLN---NCKHEDDFAEA-----SRSSQNNGTLEQLDGLVKEGKVKEAI 395
+ + + ++A+ +LN C DDF A SR + T+ L G ++ G+ A+
Sbjct: 161 TAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTM--LAGRIQCGREASAL 218
Query: 396 EVLGLLEKQCISV-DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
E+L ++++ + TF+ L+ ACG+ A+ + + +H+ + + V + +L M
Sbjct: 219 ELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALLNM 278
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y++C +D+A +F E + ++ +M+ +A+NG DA+ +F +Q G KPD F
Sbjct: 279 YAKCGRVDEARELFDQTLEPNNITFSSMVVAYARNGHFGDALKLFWSMEQDGYKPDSVTF 338
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
V ACS G V + +F ++ D GI +H+ VD+L G+L +A +F+ +MP
Sbjct: 339 THVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNRMP 398
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGL--VPVN 625
+ PD W L+ CR+H N+E+G R AE V +L P R N S AG +
Sbjct: 399 IPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAK 458
Query: 626 ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
+L +++ KK ++ +E+ K E+ GD+ HP+ +I I+ + MKE GY+P+
Sbjct: 459 VQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPD 518
Query: 686 TRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISK 745
T+ VLHD ++E KE+ L HSE+LA+ GL+ +P + I I+KN+RVC DCH+A K+ISK
Sbjct: 519 TKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVISK 578
Query: 746 IVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ R+++IRD FHH +DG CSCRDYW
Sbjct: 579 VTERKIVIRDINLFHHMEDGKCSCRDYW 606
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G V+EA+E+L + C +AL +A +H + L + S Y
Sbjct: 28 GLVREAVELL------------------LHRCAAERALPQAHQLHALM--LATGALRSRY 67
Query: 449 --NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N +++ Y +C ++ A +VF+ + ++ SW +I+ +N L A+ + + G
Sbjct: 68 LSNKLVQAYGQCGDVESAHAVFACQPDPNVFSWMMLISACLRNALPRAALGHYRAMQLRG 127
Query: 507 LKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
PD + +F A + LG + L +M D P + + S+++M G
Sbjct: 128 CHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHD----PVVAN--SLLNMYRRCG 181
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
+D+ MP +V W ++
Sbjct: 182 GMDDFERAFWAMPSRDEVS-WTTML 205
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 236/403 (58%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG V+ + A+E ++ + + + T ++ AC ALE + VH ++ +
Sbjct: 214 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEI 273
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + N ++ MYS C S+D+A +VF M +RD+ +++TMI+G + NG A+++F
Sbjct: 274 ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRV 333
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
L+P + F+GV +ACS G V G F SM++DY + P ++HY +VD+LG G
Sbjct: 334 MVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVG 393
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA + I M M PD + L++ C+MH NLELG++ A+ +E D + + + L
Sbjct: 394 RLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELE--DRGQADSGTYVLL 451
Query: 622 VPVNAS-----ELAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETDKIYALI 670
V AS E A+ + K A + +EV +++HE+ GD HP+ ++IY +
Sbjct: 452 SHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKL 511
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++ GY PE VL DI+ KE AL HSERLA+ +GL+S+ IR+MKNL
Sbjct: 512 EELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNL 571
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCHSA+K+I+KI R++++RD RFH+F++G CSC DYW
Sbjct: 572 RVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 614
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 15/297 (5%)
Query: 308 NSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCK--HEDD 365
N S DQ +SR Q P Q +G+ Q+ M ++L +C H D
Sbjct: 30 NPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIR-NGHSQDPFMVFELLRSCSKCHAID 88
Query: 366 FAEASRSSQNNGTL----EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACG 421
+A +N + +DG V G EAI++ + + I D + +++ACG
Sbjct: 89 YASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACG 148
Query: 422 DAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE----RDL 476
AL E + VH +L S R+ I+++Y +C + DA VF M E +D
Sbjct: 149 SQLALREGREVHSRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMPEDVVAKDT 207
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
W MI GF +N A++ F + ++P++ + V SACS LG + G
Sbjct: 208 VCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 267
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M K + I ++ ++++M G +DEA ++M + DV + +++ M+G
Sbjct: 268 MRK-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTMISGLSMNG 322
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 220/374 (58%), Gaps = 9/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + ++ AC AL++ + +H + R N ++ MY +C + A S+F
Sbjct: 553 DGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLF 612
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +DL SW MI G+ +G G +A++ F+Q + G++PD+ FI + ACS G +
Sbjct: 613 DMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLD 672
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG F M K+ I P+++HY +VD+L TG L +A +FI+ MP++PD +W L+
Sbjct: 673 EGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG 732
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK-EKENKKLASQNL---- 643
CR+H +++L ++ AE + +L+P + A + + +K KK+ + L
Sbjct: 733 CRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNP 792
Query: 644 ----LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+E++ K++ + AGD S P+ KI L++ LR++MKE GY P+T + L + D+ KE
Sbjct: 793 GCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKE 852
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
AL HSE+LA++ G+L+ P IR+ KNLRVCGDCH K +SK RE+I+RD+ RF
Sbjct: 853 VALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRF 912
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG CSCR YW
Sbjct: 913 HHFKDGSCSCRGYW 926
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%), Gaps = 13/218 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+EG AI++ ++ + + D+ + ++ AC L+ K VH+++
Sbjct: 425 MITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRE-- 482
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ L +++ N + MY++C SM DA VFS+M ++D+ SW+TMI G+ KN L +A+ +
Sbjct: 483 NNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTL 542
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS--IVD 555
F++ ++ KPD + AC++L + +G +H ++ Y S YV+ +VD
Sbjct: 543 FAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGY----SEDKYVTNAVVD 597
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L A + +P D+ W ++ MHG
Sbjct: 598 MYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHG 634
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK G IE+ + + +DL T + AC + L K +H + +
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ R V N +L MYS+C ++ A VF M E+ + SW +MITG+ + GL + A+ +F
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDML 557
+ K G+ PD + +AC+ G++ G + + + ++ +VS + DM
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENN---LETNSFVSNALTDMY 499
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G + +A + M + DV W ++
Sbjct: 500 AKCGSMKDAHDVFSHMK-KKDVISWNTMI 527
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TFS +++ +EE + VH + +L + N ++ Y + A +F +
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
T+RD+ SW++MI+G+ KNGL + ++IF + G+ D + VF AC+ +G ++ G
Sbjct: 313 TDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+LH S+ K + ++ +++DM G L+ A+ E+M E V W ++
Sbjct: 373 VLHSYSI-KAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-EKTVVSWTSMIT 427
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G +K A+E+L Q + DL + ++Q C + K++ + + V +E S + +
Sbjct: 131 GDLKNAMELL--CSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIES--SGVMIDGI 186
Query: 449 NGI--LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
G+ + MY +C + + VF ++E + W+ MI+ ++ +G +++++F Q + G
Sbjct: 187 LGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELG 246
Query: 507 LKPDDQIFIGVFSACSALGDVVEG 530
+KP+ F + +A+ V EG
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEG 270
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 235/401 (58%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + GK EA+E+ ++ + + T ++ ACG+ AL ++ H R+
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY++C ++ + VF+ M ++L W++++ GF+ +G ++ + IF
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ LKPD F + SAC +G EG +F+ MS++YGI P ++HY +V++LG G
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNE 615
L EA + I++MP EPD VW L+N CR+ N++L + AE + L+P L+
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Query: 616 KSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
A + + + E+ KK + ++V+++V+ AGD SHP+ D+I +
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +M+++G+ P F LHD++++ +E+ L HSE+LAV GLL++P P++++KNLR+
Sbjct: 660 ISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRI 719
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+ +K IS GRE+ IRD RFHHFKDG+CSC D+W
Sbjct: 720 CGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 40/267 (14%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV----- 436
L G + G KEA+ + + D T S ++ + GD++ L + +H +V
Sbjct: 224 LSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL 283
Query: 437 --ERLLSPLRVSTYN------GILKMYSECDSMD---------------------DAFSV 467
++ + + Y GI+ ++++ + M+ + F +
Sbjct: 284 LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFEL 343
Query: 468 FSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
F T E ++ SW ++I G A+NG +A+++F + + AG+KP+ + AC +
Sbjct: 344 FKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAA 403
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + ++ ++ +++DM G ++ + MP + ++ W LM
Sbjct: 404 LGHGR-STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLM 461
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRL 613
N MHG I E L +RL
Sbjct: 462 NGFSMHGK---AKEVMSIFESLMRTRL 485
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 116/323 (35%), Gaps = 79/323 (24%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLD-GLVKEGKVKEAIEVLGLLEK 403
G I ++AS NC ++ D S + L L K ++I V +
Sbjct: 50 GYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS 109
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSM 461
+ D L + C + A + K +H +S L + + + MY C M
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFVQGSMFHMYMRCGRM 167
Query: 462 DDAFSVFSNMTERD-----------------------------------LTSWDTMITGF 486
DA VF M+++D + SW+ +++GF
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 487 AKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD--------VVEGMLHFESMS 538
++G ++AV +F + G PD + V S ++GD ++ G + + +
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQ---VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 539 KDYGIVPSMK-------HYVSIVDM------------------LGSTGYLDEALEFIE-- 571
KD ++ +M H I+ + L G +D+ALE E
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 572 -KMPMEPDVDVWEKLMNLCRMHG 593
+ ME +V W ++ C +G
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNG 367
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 231/405 (57%), Gaps = 12/405 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV-HEHVERL 439
+ G + G+ EA+E+ +E I D T ++ AC A + K + H+++E
Sbjct: 318 MISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENG 377
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW--DTMITGFAKNGLGEDAVD 497
+ ++ MY++C S+D A +F + + T + ++MI G A++GLGE A+
Sbjct: 378 VFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAIT 437
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + GLKPD+ F+GV AC G + EG FESM YGI P M+HY +VD+L
Sbjct: 438 VFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLL 497
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G G L+EA + ++KMP E + +W L++ CR HGN+++G+ + + +++
Sbjct: 498 GRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYV 557
Query: 618 KAGLVPVNASELAKEKENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYA 668
+ +A++ + ++ +K+ + +E+ +H + A D SHP+ +I
Sbjct: 558 LLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIEL 617
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+++ + ++K AGY+P T V+ DID+E KE + HSE+LA++ GL+ IRI+K
Sbjct: 618 MLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVK 677
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH A K++S+I GRE+ +RD RFHHF++G CSC D+W
Sbjct: 678 NLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+ +C +LE VH H+ + + N ++ +YS +++ A ++F
Sbjct: 113 TFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDES 172
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEG 530
RDL S++TMI G+A+ E A+ +F + + +G+ PD+ F+ +FS CS L + V
Sbjct: 173 LVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGK 232
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + I ++ +IVDM G ++ A M W ++
Sbjct: 233 QIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMV 288
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 437 ERLLSPLRVS----TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
ER+ S + S ++ ++ Y+ C ++ A +F++M ERD+ SW MI+G+++ G
Sbjct: 269 ERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQC 328
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+A+++F + + G+KPD+ + V SAC+ LG G + ++ + +
Sbjct: 329 SEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAA 388
Query: 553 IVDMLGSTGYLDEALEFIEKM 573
++DM G +D ALE ++
Sbjct: 389 VMDMYAKCGSIDSALEIFRRV 409
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 248/429 (57%), Gaps = 15/429 (3%)
Query: 358 NNCKHED----DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF 413
+ CK D F E R +Q + L G + G ++A+ + ++ + + D T
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMIL-GCAQNGCSEDAVRLFTRMQLENVKPDSFTL 366
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
++ A D +A+ +H + RL V ++ MY++C ++ A +F++ E
Sbjct: 367 VSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARE 426
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
R + +W+ MI G+ +G G+ AV++F + K G+ P++ F+ V SACS G V EG +
Sbjct: 427 RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREY 486
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
F SM +DYG+ P M+HY ++VD+LG G LDEA FI+KMPM+P + V+ ++ C++H
Sbjct: 487 FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHK 546
Query: 594 NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--------ELAKEKEN-KKLASQNLL 644
N+EL + A+ + +L P + NAS A EK +K +++
Sbjct: 547 NVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSII 606
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
++++++H + +G T+H + +IY+ + L ++K GY+P+T + HD++ + K + L
Sbjct: 607 QLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNT 665
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GL+ + I+I KNLRVC DCH+A K+IS + GRE+I+RD +RFHHFKD
Sbjct: 666 HSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKD 725
Query: 765 GLCSCRDYW 773
G CSC DYW
Sbjct: 726 GKCSCGDYW 734
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G +EA+ + + ++ + V + +QACG+ L+E VHE + R+
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS N ++ MYS+C +D A VF + R SW+ MI G A+NG EDAV +F+
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ + +KPD + V A + + D ++
Sbjct: 353 RMQLENVKPDSFTLVSVIPALADISDPLQA 382
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L TF+ L++ C L +AVH + + MY++C DA VF
Sbjct: 59 LRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFD 118
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVF 518
M RD +W+ ++ G+A+NGL A+++ + + + G +PD + V
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ IL Y +C + A VF M ++ SW+ MI G+A+NG +A+ +F++ +
Sbjct: 196 VNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ D + AC LG + EGM E + + G+ ++ +++ M +D
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVD 314
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A +++ V W ++ C +G
Sbjct: 315 LASHVFDELDRRTQVS-WNAMILGCAQNG 342
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 248/429 (57%), Gaps = 15/429 (3%)
Query: 358 NNCKHED----DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTF 413
+ CK D F E R +Q + L G + G ++A+ + ++ + + D T
Sbjct: 308 SKCKRVDLASHVFDELDRRTQVSWNAMIL-GCAQNGCSEDAVRLFTRMQLENVKPDSFTL 366
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
++ A D +A+ +H + RL V ++ MY++C ++ A +F++ E
Sbjct: 367 VSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARE 426
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
R + +W+ MI G+ +G G+ AV++F + K G+ P++ F+ V SACS G V EG +
Sbjct: 427 RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREY 486
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
F SM +DYG+ P M+HY ++VD+LG G LDEA FI+KMPM+P + V+ ++ C++H
Sbjct: 487 FTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHK 546
Query: 594 NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--------ELAKEKEN-KKLASQNLL 644
N+EL + A+ + +L P + NAS A EK +K +++
Sbjct: 547 NVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSII 606
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
++++++H + +G T+H + +IY+ + L ++K GY+P+T + HD++ + K + L
Sbjct: 607 QLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNT 665
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GL+ + I+I KNLRVC DCH+A K+IS + GRE+I+RD +RFHHFKD
Sbjct: 666 HSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKD 725
Query: 765 GLCSCRDYW 773
G CSC DYW
Sbjct: 726 GKCSCGDYW 734
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G +EA+ + + ++ + V + +QACG+ L+E VHE + R+
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIG 292
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
VS N ++ MYS+C +D A VF + R SW+ MI G A+NG EDAV +F+
Sbjct: 293 LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT 352
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+ + +KPD + V A + + D ++
Sbjct: 353 RMQLENVKPDSFTLVSVIPALADISDPLQA 382
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L TF+ L++ C L +AVH + + MY++C DA VF
Sbjct: 59 LRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFD 118
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVF 518
M RD +W+ ++ G+A+NGL A+++ + + + G +PD + V
Sbjct: 119 RMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ IL Y +C + A VF M ++ SW+ MI G+A+NG +A+ +F++ +
Sbjct: 196 VNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ D + AC LG + EGM E + + G+ ++ +++ M +D
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVD 314
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A +++ V W ++ C +G
Sbjct: 315 LASHVFDELDRRTQVS-WNAMILGCAQNG 342
>gi|357501057|ref|XP_003620817.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495832|gb|AES77035.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 371
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 220/386 (56%), Gaps = 50/386 (12%)
Query: 388 EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
EG V + +E++G Q D F L++ C D K+LE K VHE + R V
Sbjct: 36 EGNVNQVLELMG----QGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVEL 91
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ +Y +C S+ DA VF M +R++ SW+ MI G+ NGLG D + +F Q +Q G+
Sbjct: 92 CNRLIGLYVKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQMRQQGI 151
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
PD++ F V + C+ + V EGM +HY+ +V++ G G LDEA
Sbjct: 152 VPDEETFALVLAVCALVDGVEEGM----------------EHYLGVVNIFGCAGPLDEAQ 195
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
EFIE MP+E VDVWE L N R++G+LE DR E++ DPS+ K L
Sbjct: 196 EFIENMPIEAGVDVWETLRNFARIYGDLEREDRADELLTVRDPSKAAADDKVPL------ 249
Query: 628 ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
+ KK ++ N+LE +++V EYR ++ LIR + +
Sbjct: 250 -----PQRKKQSAINMLEEKNRVSEYRCNILGK----QVMFLIRDTYSMI---------- 290
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
+ + +E+AL HSERLA+++GL+S+P R +RI+KNLR+CGDCH+A+KI+SKIV
Sbjct: 291 -----LMRRKREKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKIMSKIV 345
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
GRELI+RD KRFHHFKDG CSC DYW
Sbjct: 346 GRELIVRDNKRFHHFKDGKCSCGDYW 371
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 233/406 (57%), Gaps = 18/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ + + K+ + +FS ++ AC AL + +H + RL
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MY++C ++ A VF + +RD+ +W +I G A +G DAV +F
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P F+ V +ACS G V EG +F SM +D+GI P ++HY ++ D+LG G
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479
Query: 562 YLDEALEFIEKMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
L+EA +FI M ++P VW L+ CR H ++EL ++ + + +D +E A
Sbjct: 480 RLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVD----SENMGAY 535
Query: 621 LVPVNASELA-------------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
++ N A ++K KK + + +EV ++VH + AGD SHP DKI
Sbjct: 536 VLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKIN 595
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ L QM++ GY+ +T VLHD+D+E K E L HSERLA+++G++S+ A IR++
Sbjct: 596 KALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVI 655
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KN+RVC DCH+A+K I+KIVGRE+ +RD RFHHFK+G CSC DYW
Sbjct: 656 KNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EA++++ + K + D T S ++ + + + K +H + R
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MY++C+ ++ + F + +D SW+++I G +NG + + F
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ + +KP F V AC+ +LG + G + + I S+ VD
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSL------VD 371
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
M G + A +++ + D+ W ++ C MHG+
Sbjct: 372 MYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMHGH 409
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 26/207 (12%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN- 470
F L++A K + A ++H RL + N ++ Y++ + F VF
Sbjct: 112 VFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKR 171
Query: 471 --------------MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFI 515
M RD+ SW+T+I GFA+NG+ +A+D+ + + G LKPD
Sbjct: 172 GESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLS 231
Query: 516 GVFSACSALGDVVEGM-LHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
+ + DV +G +H ++ + + S S++DM L+ +L
Sbjct: 232 SILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGS-----SLIDMYAKCNRLECSLRAFY 286
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELG 598
+P D W ++ C +G + G
Sbjct: 287 ILP-RKDAISWNSIIAGCVQNGEFDRG 312
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 243/430 (56%), Gaps = 21/430 (4%)
Query: 360 CKHEDDFAEASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQL 416
CK D A Q+ + + G + G+ +A+ + + + D T+ +
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSV 444
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
+ A + AK +H V R V ++ MY++C ++ A +F M+ER +
Sbjct: 445 ITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
T+W+ MI G+ +G G+ A+++F + ++ +KP+ F+ V SACS G V G+ F
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
M ++Y I SM HY ++VD+LG G L+EA +FI +MP++P V+V+ ++ C++H N+
Sbjct: 565 MKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVN 624
Query: 597 LGDRCAEIVEQLDPS-------------RLNEKSKAGLVPVNASELAKEKENKKLASQNL 643
++ AE + +L+P + K G V V+ + +K ++
Sbjct: 625 FAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS----MLRQGLRKTPGCSM 680
Query: 644 LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALL 703
+E++++VH + +G T+HP++ KIYA + L +KEAGY+P+T VL ++ + KE+ L
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLS 739
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE+LA+S GLL++ A I + KNLRVC DCH+A K IS + GRE+++RD +RFHHFK
Sbjct: 740 THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFK 799
Query: 764 DGLCSCRDYW 773
+G CSC DYW
Sbjct: 800 NGACSCGDYW 809
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+D V+ KEA+ + +L++ D+ L AC D LE + +H+ L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL-HACADLGDLERGRFIHKLSVEL 366
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ MY +C +D A S+F + R L SW+ MI GFA+NG DA++ F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
SQ + +KPD ++ V +A + L + G++ + K+ + ++ V
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL------V 480
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
DM G + A I M E V W +++ HG G E+ E++
Sbjct: 481 DMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALELFEEM 530
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G K + +A++ + + + F+ L++ CGD L K +H + +
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + G+ MY++C +++A VF M ERDL SW+T++ G+++NG+ A+++
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ LKP + V A SAL + G +H +M + + ++ ++VDM
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAK 283
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G L+ A + + M +E +V W +++
Sbjct: 284 CGSLETARQLFDGM-LERNVVSWNSMID 310
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G + A+E++ + ++ + T ++ A + + K +H + R
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V+ ++ MY++C S++ A +F M ER++ SW++MI + +N ++A+ IF +
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G+KP D +G AC+ LGD+ G +S + G+ ++ S++ M +
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRF-IHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 564 DEALEFIEKM 573
D A K+
Sbjct: 389 DTAASMFGKL 398
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 221/401 (55%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G + A+E ++ ++ D+ TF + C D AL + + VH V +
Sbjct: 247 IAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGV 306
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS C + D+ V+ DL MI+ +G G AV++F Q
Sbjct: 307 DKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQ 366
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G +P++ F+ + ACS G EG+ FE M+K YG PS+KHY IVD+LG +G
Sbjct: 367 MMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSG 426
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEA I MP+ D +W+ L++ C+ N ++ +R AE V + DP S
Sbjct: 427 CLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSN 486
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ SK ++ +EK+ +K + +E + +VH++ GD SHP +I ++
Sbjct: 487 IRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKE 546
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++++ GY P+ V HD++ E KE +L HSE+LA++ L+ P PIR+MKNLRV
Sbjct: 547 MMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRV 606
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A+K+IS++ GRE+++RD RFHHF+DG CSC DYW
Sbjct: 607 CDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 7/226 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GL G +++++ + ++ + D + + C + + VH +V R
Sbjct: 148 GLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDS 207
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ N + MY C + + +V + + S++T I G +NG E A++ FS +
Sbjct: 208 DMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMR 267
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
+ PD F+ S CS L + +G +H + + G+ + S+V M G
Sbjct: 268 GVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKA--GVDKVVPVITSLVHMYSRCGC 325
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
L ++ E + D+ + +++ C HG G + E+ +Q+
Sbjct: 326 LGDS-ERVYDGYCGLDLFLLSAMISACGFHGQ---GHKAVELFKQM 367
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + L+ A D L A+ + E + S V ++N ++ + + A +F M
Sbjct: 79 TTNNLLLAYADLGDLPTARHLFEGI----SKRNVMSWNILIGGCIKNGDLGSARELFDKM 134
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
R++ +W+ M+ G GL ED++ F ++ G+ PD+ VF C+ L DVV G
Sbjct: 135 PTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSG 193
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 232/403 (57%), Gaps = 11/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLL 440
+ V+ KEA+E+ + + +D TF ++ AC ALE+ +A+H V E L
Sbjct: 277 ISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPL 336
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N IL MY +C S+ DA ++F +M++ D+ +W+TMI + ++G +A+ +
Sbjct: 337 ASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYE 396
Query: 501 QFKQAGLKPDDQIFIGVFSA-CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++ G+ PDD ++ V A C+ G E +F SM +D+G+ P HY +V+ LG
Sbjct: 397 LMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGK 456
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L +A I+ MP EPDV W + CR HG+++ G A+ ++DP
Sbjct: 457 AGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVAL 516
Query: 620 GLVPVNASELAKEKENKKL---------ASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ +A + + +KL A ++++++ + V+E+ AGD S+P + +I+ +
Sbjct: 517 ARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDEL 576
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ L +MK AGY P+ V HD++ KE L AHSERLA++ G++S+ P+RIMKNL
Sbjct: 577 KRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNL 636
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH+ K+ SKI RE+I+RD+ RFHHFK+G CSC+D+W
Sbjct: 637 RVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G++ AI+ L ++ DL +++Q+C AL E + +H+ + R+ V
Sbjct: 17 GQIAAAIDAL----QKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVS 72
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY +C S+++A VF +++ SW +IT A++G ++A+ +F + + G++
Sbjct: 73 NHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQ 132
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P F +ACSA + + ++ + YG ++ S+V M G L+E++
Sbjct: 133 PHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMR 192
Query: 569 FIEKMPMEPDVDVWEKLM 586
E M EP+ W ++
Sbjct: 193 TFESMT-EPNAVSWNAMI 209
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C + DA + F + E ++ +W+ +I+ + ++ ++A+++F + GL+ D
Sbjct: 245 LVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMD 304
Query: 511 DQIFIGVFSACS---AL--GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ FI + AC AL G + + ++ ++ + ++ I++M G G L +
Sbjct: 305 EVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENV-----ILNMYGKCGSLQD 359
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
A + M +PDV W ++ HG+ R E++++
Sbjct: 360 AEAMFKSMS-QPDVIAWNTMIAAYGQHGHTSEALRFYELMQE 400
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 17/221 (7%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQAC-GDAKALEEAKAVHEHVERLLSPLRV 445
+ G+ +EA+ + + KQ I +F+ + AC + L +A+H + R V
Sbjct: 112 QHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAV 171
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ MYS+C S++++ F +MTE + SW+ MI FA++ G +A+ +
Sbjct: 172 VATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLE 231
Query: 506 GLKPDDQIFIG-----VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G++ + +G +++ CS L D + + P++ + ++
Sbjct: 232 GIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQE--------PNIITWNVLISAYVQH 283
Query: 561 GYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELG 598
EA+E +M +E D + ++ C + LE G
Sbjct: 284 CCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDG 324
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 235/390 (60%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+AI + +E + + +L TF+ ++ AC AL E K +H+ V+ P V+ ++
Sbjct: 266 KAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALV 325
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C S +A +VF++ +++ +W ++++ +++ G + ++ + + G+ PDD
Sbjct: 326 NMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDV 385
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F +F+ACS G EG+L+F +M +D+ IVP HY ++D+LG G L EA E +
Sbjct: 386 TFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRT 445
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MP PDV W L++ C+++G+L++G R + + +L+P G + A + A
Sbjct: 446 MPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADV 505
Query: 633 KENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
E KK+ Q +++E + ++HE+ GDT+HP +I A ++ + Q+ AGY
Sbjct: 506 AEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYE 565
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T+ VL D+++E K E LL HSER+A+ GLL+S A A + I+KNLR+C DCHS K++
Sbjct: 566 PDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLV 625
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SK++ R++++RD+ RFH F+ G CSC DYW
Sbjct: 626 SKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH----EHVERLLSPLRVSTY 448
EA E+ + + I D+ ++ + C + E +A+H H R +P+
Sbjct: 169 EAYELYKKMLSEGIMPDIYAYAAALAVC---PTIREGEAIHVKLGNHERR--TPV---CS 220
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY + A VF + +DL S++ MI FAK G A+ ++ + + L+
Sbjct: 221 NALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLE 280
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHY-VSIVDMLGSTGYLDEA 566
P+ F V ACS LG + EG +H + D P+ Y ++V+M G EA
Sbjct: 281 PNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQ---PTDVAYNTALVNMYAKCGSTHEA 337
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
++ +V W LM+
Sbjct: 338 RAVFNDCGLK-NVFTWTSLMS 357
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +++ Y C S+DDA + FS + E++ S+ M+ + +N L + A+ +F + L+
Sbjct: 21 NCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQ 80
Query: 509 PDDQIFIGVFSACSALG-DVVE--GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ ++ V +C+ LG D +E +H ++++ +G +++ S++ M G
Sbjct: 81 QNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQN--SLIHMYAKCGSFKF 138
Query: 566 ALEFIEKMPMEP 577
A EK MEP
Sbjct: 139 AAGVFEK--MEP 148
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 412 TFSQLMQACGDA--KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
T+ ++++C LE+ K +H H + N ++ MY++C S A VF
Sbjct: 85 TYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFE 144
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
M ++L S+ +MI + +A +++ + G+ PD + + C +
Sbjct: 145 KMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTI 199
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 233/404 (57%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G G KEA+ ++++ + + + + L++AC L++ K +H R
Sbjct: 732 MISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 791
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ + V+T ++ MYS+ S+ +A VF + + L SW+ MI GFA GLG++A+ +
Sbjct: 792 FIEDVFVAT--ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISV 849
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F++ ++ G+ PD F + SAC G + EG +F+SM DY IVP ++HY +VD+LG
Sbjct: 850 FNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 909
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-SRLNEKS 617
GYLDEA + I MP++PD +W L+ CR+H NL+ + A+ + +L+P + N
Sbjct: 910 RAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYIL 969
Query: 618 KAGLVPV--------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + + EL + + +++ +VH + + + HP+ KIY
Sbjct: 970 MMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFE 1029
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L ++MK+ GY+P+ V ++D+ K++ LL+H+E+LA+++GL+ A PIR++KN
Sbjct: 1030 LYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKN 1089
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCHSA K IS + REL +RD RFHHF++G CSC D+W
Sbjct: 1090 TRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQA-CGDAKALEEAKAVHEHVERLLSPLRVSTY 448
K+++ +E+ ++ + + T +++QA + L K H +V R V
Sbjct: 604 KLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVG 663
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY + S+ A +VF NM R++ +W+++++G++ G+ EDA+ + +Q ++ G+K
Sbjct: 664 TSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 723
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD + G+ S + G E + F M ++ G++P+ ++ S L + E
Sbjct: 724 PDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPNSASITCLLRACASLSLLQKGKE 782
Query: 569 F 569
Sbjct: 783 I 783
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 253/448 (56%), Gaps = 20/448 (4%)
Query: 344 SGNIQNGMMASQVLN---NCKHEDDFAEA-----SRSSQNNGTLEQLDGLVKEGKVKEAI 395
+ + + ++A+ +LN C DDF A SR + T+ L G ++ G+ A+
Sbjct: 161 TAMLHDPVVANSLLNMYRRCGGMDDFERAFWAMPSRDEVSWTTM--LAGRIQCGREASAL 218
Query: 396 EVLGLLEKQCISV-DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
E+L ++++ + TF+ L+ ACG+ A+ + + +H+ + + V + +L M
Sbjct: 219 ELLRVMDQDGFRITSALTFATLVDACGNLSAIAQGRHLHDRIITSGVCIDVVLHTALLNM 278
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y++C +D+A +F E + ++ +M+ +A+NG DA+ +F +Q G KPD F
Sbjct: 279 YAKCGRVDEARELFDQTLEPNNITFSSMVAAYARNGHFGDALKLFWSMEQDGYKPDSVTF 338
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
V ACS G V + +F ++ D GI +H+ VD+L G+L +A +F+ +MP
Sbjct: 339 THVLYACSHGGFVDQAWHYFTTLEPDRGIPLVAEHFGCAVDLLARAGWLADAEKFLNRMP 398
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGL--VPVN 625
+ PD W L+ CR+H N+E+G R AE V +L P R N S AG +
Sbjct: 399 IPPDSVSWMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAK 458
Query: 626 ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
+L +++ KK ++ +E+ K E+ GD+ HP+ +I I+ + MKE GY+P+
Sbjct: 459 VQKLMRDRGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPD 518
Query: 686 TRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISK 745
T+ VLHD ++E KE+ L HSE+LA+ GL+ +P + I I+KN+RVC DCH+A K+ISK
Sbjct: 519 TKQVLHDAEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVISK 578
Query: 746 IVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ R+++IRD FHH +DG CSCRDYW
Sbjct: 579 VTERKIVIRDINLFHHMEDGNCSCRDYW 606
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G V+EA+E+L + C +AL +A +H + L + S Y
Sbjct: 28 GLVREAVELL------------------LHRCAAERALPQAHQLHALM--LATGALRSRY 67
Query: 449 --NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N +++ Y +C ++ A +VF+ + ++ SW +I+ +N A+ + + G
Sbjct: 68 LSNKLVQAYGQCGDVESAHAVFARQPDPNVFSWMMLISACLRNARPRAALGHYRAMQLRG 127
Query: 507 LKPDDQIFIGVFSACS-----ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
PD + +F A + LG + L +M D P + + S+++M G
Sbjct: 128 CHPDAHVVSAIFCAVADTANLELGRSITAPLASTAMLHD----PVVAN--SLLNMYRRCG 181
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLM 586
+D+ MP +V W ++
Sbjct: 182 GMDDFERAFWAMPSRDEVS-WTTML 205
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 216/368 (58%), Gaps = 9/368 (2%)
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+++ AC AL + K VH V+ I+ MYS+C +D+A F+ +
Sbjct: 2 EVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERH 61
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
D SW M+ FA++G + A+ F + ++ G KP+ F+ + SACS G V EG +F
Sbjct: 62 DTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYF 121
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ M+ YGI P +HY +VD+LG GYLDEA F+ +MP P V + L++ CR + +
Sbjct: 122 DLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEGFLNRMPGAPHAAVLKSLLSACRSYKD 181
Query: 595 LELGDRCAE-IVEQLDPSRLNEKSKAGLV--------PVNASELAKEKENKKLASQNLLE 645
++ G+R A+ ++E + A + L E+ +K ++ +E
Sbjct: 182 VDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDPGRSAIE 241
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
V +V E+ AGD SH + + I A ++ L + MK+AGY+P+T VLHD+ +E KE+ LL H
Sbjct: 242 VEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWH 301
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE+LAV+ GLL++PA +PIR++KNLRVC DCH A K+IS I R ++ RD RFHHF++G
Sbjct: 302 SEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRFHHFENG 361
Query: 766 LCSCRDYW 773
+CSC DYW
Sbjct: 362 VCSCGDYW 369
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 247/456 (54%), Gaps = 47/456 (10%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A V +N K+ + FA S S G +G ++A+ +L +EK+ I DL T
Sbjct: 965 AQAVFDNMKNRNIFAWNSLVS----------GYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014
Query: 413 F------------------------SQLMQACGDAKALEEAKAVHEHVER--LLSPLRVS 446
+ + L++AC L++ K +H R + + V+
Sbjct: 1015 WNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 1074
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T ++ MYS+ S+ +A VF + + L SW+ MI GFA GLG++A+ +F++ ++ G
Sbjct: 1075 T--ALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG 1132
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ PD F + SAC G + EG +F+SM DY IVP ++HY +VD+LG GYLDEA
Sbjct: 1133 VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEA 1192
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-SRLNEKSKAGLVPV- 624
+ I MP++PD +W L+ CR+H NL + A+ + +L+P + N L +
Sbjct: 1193 WDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIF 1252
Query: 625 -------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+ EL + + +++ +VH + + + HP+ KIY + L ++M
Sbjct: 1253 NRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEM 1312
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K+ GY+P+ V ++D+ K++ LL+H+E+LA+++GL+ A PIR++KN R+C DCH
Sbjct: 1313 KKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCH 1372
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SA K IS + REL +RD RFHHF++G CSC D+W
Sbjct: 1373 SAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K+++ +E+ ++ + + T +++QACG AL AK +H +V R VS N
Sbjct: 755 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 814
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MYS+ ++ A VF +M R+ +SW++MI+ +A G DA +F + + + +KP
Sbjct: 815 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 874
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
D + + S L E +L+ + G P+ S++ + G+L+
Sbjct: 875 DIVTWNCLLSG-HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLN 928
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 74/144 (51%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G G +E + +L ++ + + + + ++QA + L K H +V R
Sbjct: 883 LSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF 942
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MY + S+ A +VF NM R++ +W+++++G++ G+ EDA+ + +Q
Sbjct: 943 DCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQ 1002
Query: 502 FKQAGLKPDDQIFIGVFSACSALG 525
++ G+KPD + G+ S + G
Sbjct: 1003 MEKEGIKPDLVTWNGMISGYAMWG 1026
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 244/442 (55%), Gaps = 32/442 (7%)
Query: 348 QNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
+NG++ A +V H +D + ++ + G + G+ EA+ + ++
Sbjct: 256 KNGLLDVACRVFGLMVHRNDVSWSA----------MISGFAQNGQSDEALRLFRNMQASG 305
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL-----KMYSECDS 460
I D + AC + L+ ++VH + R +N IL MYS+C S
Sbjct: 306 IQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD------FNCILGTAAIDMYSKCGS 359
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F+ +++RDL W+ MI +G G+DA+ +F + + G++PD F + SA
Sbjct: 360 LASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSA 419
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
S G V EG L F M + I P+ KHYV +VD+L +G ++EA + + M EP V
Sbjct: 420 LSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVA 479
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAK 631
+W L++ C + LELG+ A+ + +L P S L +K +L K
Sbjct: 480 IWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMK 539
Query: 632 EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLH 691
+ +KK+ + +E+R H + D SHP+ ++I + + L +M++ GYIP T FV H
Sbjct: 540 DSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYH 599
Query: 692 DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGREL 751
D+++E KE+ L HSE+LA++ GLL++ + I+KNLRVCGDCH A+K ISKI RE+
Sbjct: 600 DLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREI 659
Query: 752 IIRDAKRFHHFKDGLCSCRDYW 773
++RDAKRFHHFKDG+CSCRDYW
Sbjct: 660 VVRDAKRFHHFKDGVCSCRDYW 681
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V G+ +AI++ + + + D ++QAC A+ + +VH H+ R +
Sbjct: 183 GFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRM 242
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V T ++ MY++ +D A VF M R+ SW MI+GFA+NG ++A+ +F +
Sbjct: 243 DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQ 302
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGM-LH-FESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++PD + ACS +G + G +H F D+ + + +DM G
Sbjct: 303 ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCILG----TAAIDMYSKCG 358
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
L A + + M + D+ +W ++ C HG
Sbjct: 359 SLASA-QMLFNMISDRDLILWNAMIACCGAHGR 390
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ + AC L ++V + V + +L +Y+ +M DA VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA----- 523
M RD +W TM+ GF G DA+ ++ + ++ G+K D+ + IGV AC+A
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+G V G L M D +V + S+VDM G LD A M DV W
Sbjct: 227 MGASVHGHLLRHGMRMD--VVTA----TSLVDMYAKNGLLDVACRVFGLMVHRNDVS-WS 279
Query: 584 KLMN 587
+++
Sbjct: 280 AMIS 283
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 235/412 (57%), Gaps = 29/412 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE---EAKAVHEHVE 437
+ G G ++A+++ ++ + + D T ++ AC AL+ A ++ + E
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNE 346
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L +P+ + ++ MYS+C S+ A+ +F+ M ++D W+ M+ G + NG +
Sbjct: 347 FLSNPVLGT---ALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFS 403
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+FS ++ G++PD+ FIG+ C+ G V EG F +M + + + PS++HY +VD+L
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLL 463
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------- 610
G G L+EA + I MPM+P+ VW L+ C++H + L ++ + + +L+P
Sbjct: 464 GRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYV 523
Query: 611 ---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHP 661
R E K KE++ +K+ + + +E+ VHE+ GD SH
Sbjct: 524 QLSNIYSGNHRWEEAEKI-------RSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHW 576
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
++KIYA + L ++K G++P T FVL DI++E KE L HSE+LAV+ GL++SP
Sbjct: 577 LSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPN 636
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IR++KNLRVCGDCH A+K+ISKI RE+IIRD RFH F DG CSCRDYW
Sbjct: 637 HVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EAI L + + D + +++ AC + + ++
Sbjct: 187 ITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGM 246
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V +L MY +C +++ A +FS M E+D+ SW TMI G+A NGL + A+D+F Q
Sbjct: 247 GRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ 306
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV-PSMKHYVSIVDMLGST 560
+ LKPD +GV SAC+ LG + G+ M ++ + P + +++DM
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKC 364
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
G + +A E M + D VW +M M+G+ + +VE+
Sbjct: 365 GSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV + +AI + G + + T +++AC + +H + +
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V +L +Y +CD+ DDA VF ++ ++++ SW +ITG+ +G +A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GLKPD + V +AC+ LGD G + D G+ ++ S++DM
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEW-IDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L+ A MP E D+ W ++
Sbjct: 264 GNLERANLIFSAMP-EKDIVSWSTMI 288
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VFS + E ++ W+TMI G +DA+ ++ + G P++ V AC+ D
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V G L S+ G + S++ + D+AL+ + +P + +V W ++
Sbjct: 130 VRLG-LKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAII 187
Query: 587 N 587
Sbjct: 188 T 188
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 218/401 (54%), Gaps = 44/401 (10%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +E+++ + +S D + ++ AC + LE K VH +L
Sbjct: 487 VTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGL 546
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ MY++C +DDA ++F +M RD+ +W +I G+A+NG G D++ F Q
Sbjct: 547 RSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQ 606
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
M K YGI P +HY ++D+ G G
Sbjct: 607 -----------------------------------MKKIYGIEPGPEHYACMIDLFGRLG 631
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
LDEA E + +M ++PD VW+ L+ CR+HGNLELG+R A + +L+P S
Sbjct: 632 KLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSN 691
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ ++ L K K K + +E+ S++H + + D HP +IY+ I
Sbjct: 692 MYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDE 751
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++KE GY+P+ F LHD+D+EGKE L HSE+LAV+ GLL+SP APIRI KNLRV
Sbjct: 752 IIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRV 811
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA+K IS + R +I+RD+ FHHFK+G CSC DYW
Sbjct: 812 CGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G +AIE + + + + TF ++ AC A + VH + R
Sbjct: 286 MVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG 345
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C + A V NM + D+ SW++MI G ++G E+A+ +F
Sbjct: 346 FGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFK 405
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH---FESMSKDYGIVPSMKHYVSIVDML 557
+ +K D F V + C +G + +H ++ ++Y +V + ++VDM
Sbjct: 406 KMHARNMKIDHYTFPSVLNCC-IVGRIDGKSVHCLVIKTGFENYKLVSN-----ALVDMY 459
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
T L+ A EKM E DV W L+
Sbjct: 460 AKTEDLNCAYAVFEKM-FEKDVISWTSLVT 488
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA ++ + + T +++ C +++ + +H +V +
Sbjct: 184 ISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGF 243
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIF 499
V G++ MY++C + +A +F + + + W M+TG+A+NG A++ F
Sbjct: 244 ESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFF 303
Query: 500 SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
G++ + F + +ACS++ G+ V G + + +G ++ ++V
Sbjct: 304 RYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCI----VRNGFGCNAYVQS--ALV 357
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G L A +E M + DV W ++ C HG
Sbjct: 358 DMYAKCGDLGSAKRVLENME-DDDVVSWNSMIVGCVRHG 395
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 32/149 (21%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM-------------------------- 482
N +L S+ +DDA +F M +RD +W+TM
Sbjct: 119 NQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSI 178
Query: 483 -----ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
I+G+ + G +A D+F + + G KP + CSALG + +G + +
Sbjct: 179 TWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYV 238
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
K+ G ++ +VDM ++ EA
Sbjct: 239 VKN-GFESNVYVVAGLVDMYAKCRHISEA 266
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 238/402 (59%), Gaps = 14/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLS 441
G K G+ ++A+ + + + I D T S ++ +C +L +AVH + L +
Sbjct: 296 GYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNN 355
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L VS+ ++ MYS+C +DDA SVF+ M R++ SW+ MI G A+NG +DA+++F
Sbjct: 356 NLLVSS--ALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
Q KPD+ FIG+ SAC + +G +F+S+S +G+ P++ HY +V++LG TG
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+++A+ I+ M +PD +W L+++C G++ + A + +LDP+ N
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533
Query: 615 EKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ G AS L K K KK A + +E+ ++VH + + D +HPE++ IY +
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP-ARAPIRIMKNLR 731
L +++E G+ P T VLHD+ ++ K +++ HSE+LA++ GL+ P +PIRI+KN+R
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH +K S+I+GR++I+RD+ RFHHF G CSC D W
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 439 LLSPLRVS-------TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
LL +R+S T + I+ Y +C +D+A VFS E+D+ W M+ G+AKNG
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHY 550
EDA+ +F++ ++PD V S+C+ L + G +H +S+ G+ ++
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA--GLNNNLLVS 360
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+++DM G++D+A MP +V W ++ C +G+
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGH 403
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 33/315 (10%)
Query: 287 DTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGN 346
D+ H Q L H FG +++ + + + + W+ Y + SG+
Sbjct: 57 DSFLHNQLL--HLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAK----------SGS 104
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCI 406
IQN K D S N T+ G +E++E+ ++++
Sbjct: 105 IQN----------LKATFDRMPFRDSVSYNTTIAGFSG---NSCPQESLELFKRMQREGF 151
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
T ++ A L K +H + V +N + MY++C ++ A
Sbjct: 152 EPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARW 211
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F +T+++L SW+ MI+G+AKNG E + + Q + +G PD + +A G
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGR 271
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM---EPDVDVWE 583
V E F K+ IV + +++ G ++AL +M + EPD
Sbjct: 272 VDEARRVFSEF-KEKDIVC----WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLS 326
Query: 584 KLMNLCRMHGNLELG 598
+++ C +L G
Sbjct: 327 SVVSSCAKLASLHHG 341
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
++QL+ C + +AK + H+E L P +N +L +Y++ + DA ++F
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 471 MTERDLTSWDTMITGFAKNG-------------------------------LGEDAVDIF 499
M +RD SW+ +++ +AK+G ++++++F
Sbjct: 84 MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ ++ G +P + + + +A + L D+ G +H + +++ + ++ + ++ DM
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNF--LGNVFIWNALTDMYA 201
Query: 559 STGYLDEA 566
G +++A
Sbjct: 202 KCGEIEQA 209
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 244/432 (56%), Gaps = 24/432 (5%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
++V ++C+ E S N+ + G V+ G E + + I +
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNS----IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYS 342
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS +M AC L K +H ++ R + + ++ MY++C ++ A +F M
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD+ SW MI G A +G DA+++F Q + G+K V +ACS G V E
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWK 455
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+F SM++D+GI P ++HY ++ D+LG G L+EA +FI M + P +W L++ CR+H
Sbjct: 456 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 515
Query: 593 GNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAKEKEN------KKLASQ 641
N+++ ++ A + ++DP+ N + L + ++ E AK + + +K +
Sbjct: 516 KNIDMAEKVANRILEVDPN--NTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPAC 573
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ +EV++KV+ + AGD SHP +KI + L M++ GY+P+T V HD+++E K+
Sbjct: 574 SWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYL 633
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
+ +HSERLA+ G++++PA IR+ KNLRVC DCH+A K ISKIVGRE+++RD RFHH
Sbjct: 634 VCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHH 693
Query: 762 FKDGLCSCRDYW 773
FK+G CSC DYW
Sbjct: 694 FKNGTCSCGDYW 705
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY++C + D+ VF+ +TERD SW+++I G +NGL ++ + F Q
Sbjct: 274 IYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM 333
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A +KP F + AC+ L + G ++++ G ++ S+VDM G +
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIR 392
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----SRLNEKSKAG 620
A + ++M + D+ W ++ C +HG E+ EQ++ + L S G
Sbjct: 393 TAKQIFDRMRLR-DMVSWTAMIMGCALHGQ---APDAIELFEQMETEGIKAVLTACSHGG 448
Query: 621 LV 622
LV
Sbjct: 449 LV 450
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 93/238 (39%), Gaps = 37/238 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC------------- 458
F ++++C L +++H ++ R+ + T N ++ MYS+
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167
Query: 459 ----DSM---------------DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
D M D +F M E+DL SW+T+I G A+NGL E+ + +
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ A LKPD V + D+ G S G+ + S++DM
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGK-EIHGCSIRQGLDADIYVASSLIDMYAK 286
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
+ ++ + + E D W ++ C +G + G R Q+ +++ KS
Sbjct: 287 CTRVADSCR-VFTLLTERDGISWNSIIAGCVQNGLFDEGLR---FFRQMLMAKIKPKS 340
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+YS + + D+ +F+ + +W ++I + +GL ++ F +GL PD +
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 514 FIGVFSACSALGDV 527
F V +C+ L D+
Sbjct: 109 FPSVLKSCALLMDL 122
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 226/399 (56%), Gaps = 11/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + + A+E+ +++ + T + +++AC LE H H+ + L
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL 293
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
++ N ++ MY +C S++DA VF+ M ERD+ +W TMI+G A+NG ++A+ +F + K
Sbjct: 294 ILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G KP+ +GV ACS G + +G +F SM K YGI P +HY ++D+LG G L
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKL 411
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
D+A++ + +M EPD W L+ CR+ N+ L + A+ V LDP + +
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIY 471
Query: 624 VNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
N+ + +++ KK + +EV ++H + GD SHP+ ++ + L
Sbjct: 472 ANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++ GY+PET FVL D++ E E++L HSE+LA++ GL++ P IRI KNLR+CG
Sbjct: 532 HRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICG 591
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH K+ SK+ R ++IRD R+HHF+DG CSC DYW
Sbjct: 592 DCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A+E+L L+ + + ++ T+S ++++C + + + +H + + V + +
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSAL 200
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ ++++ +DA SVF M D W+++I GFA+N + A+++F + K+AG +
Sbjct: 201 IDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
V AC+ L + GM H + D ++ + ++VDM G L++AL
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDALRVF 316
Query: 571 EKMPMEPDVDVWEKLMN 587
+M E DV W +++
Sbjct: 317 NQMK-ERDVITWSTMIS 332
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
S+ L + L + + A++ + L+ + D T+S+L++ C +A+ E
Sbjct: 23 STDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL 82
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+ H+ + N ++ MY + + ++DA +F M +R++ SW TMI+ ++K +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
+ A+++ + ++P+ + V +C+ + DV MLH + + G+ +
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--RMLHCGIIKE--GLESDVFVRS 198
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++D+ G ++AL ++M + D VW ++
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSII 232
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 232/397 (58%), Gaps = 19/397 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--N 449
++AI VL ++ + + + TF ++ AC AL++ + +HE + L L Y
Sbjct: 245 RDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLT 304
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MYS+C ++ A +F + DL W+++I A++G E A+++F + + GL+P
Sbjct: 305 ALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 364
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F V ACS G + +G HF S D+GI P +H+ +VD+LG G++ ++ +
Sbjct: 365 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL 424
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV 622
+ MP EP W + CR + N++ AE + QLDP + N +KAG
Sbjct: 425 LLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAG-- 482
Query: 623 PVNASELAKEKENKKL------ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
S++A+ ++ +L A ++ +EV+ +VHE+ +GD HP +I+A ++ L
Sbjct: 483 --RWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MKEAGY+P+T VLHD+ QE KE + HSE+LA++ LL++P +PIR++KNLRVC DC
Sbjct: 541 MKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDC 600
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K ISK+V RE+++RD RFH F++G CSC DYW
Sbjct: 601 HTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S + AC DA+ + +++ + ++ MY + DA SVF M+
Sbjct: 64 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD+ +W M+ +A+NG +A+ +F Q G+ P+ + AC++LGD+ G L
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 183
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ + GI + ++V++ G G ++ A+E ++ +E +V W +
Sbjct: 184 MHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAWSAI 234
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 8/236 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G +EA+ + ++ ++ + T + AC L +H+ VE V
Sbjct: 139 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 198
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ +Y +C ++ A F + E+++ +W + +A+N DA+ + + G
Sbjct: 199 VGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 258
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
L P+ F+ V AC+A+ + +G +H + G+ + ++V+M G L
Sbjct: 259 LVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLAL 318
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSRLNEKS 617
A + +K+ D+ +W L+ HG LEL +R +E L P+ + S
Sbjct: 319 AGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELFERMR--LEGLQPTIITFTS 371
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 229/401 (57%), Gaps = 13/401 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ EA+++ L+ + + AC L+ K++H + R L
Sbjct: 281 ISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLE 340
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +L MYS+C S++ A +F+ ++ RDL W+ +I +G G DA+ +F +
Sbjct: 341 -WQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQE 399
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KPD F + SA S G V EG F+ M K++GI P+ KHYV IVD+L +G
Sbjct: 400 LNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSG 459
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
++EA + + M EP + +W L++ C + LELG+ A+ + +L P S
Sbjct: 460 LVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSN 519
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L +K +L K+ +KK+ +L+EV+ H + D SHP+ +I ++
Sbjct: 520 LYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAK 579
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++M++ GY+P T FV HD+D+ ++ L HSERLA++ GLL++ + I+KNLRV
Sbjct: 580 LNSEMRKLGYVPRTEFVYHDLDE---DQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRV 636
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH A+K ISKIV RE+++RDAKRFHHFKDG CSC DYW
Sbjct: 637 CGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ + AC L+ A++V V + +L +YS C +M++A VF M
Sbjct: 109 TFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGM 168
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV---- 527
+D +W TM+ GF G +A+ ++S+ ++ G+ D+ + +GV AC + G+
Sbjct: 169 PRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGA 228
Query: 528 -VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V G L M D +V + S+V M G+LD A + MP DV W L+
Sbjct: 229 SVHGRLLRHCMRMD--VVTT----TSLVSMYAKNGHLDVACQVFRMMPYRNDV-TWSALI 281
Query: 587 N 587
+
Sbjct: 282 S 282
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V G+ EA+ + + + +S D ++QAC +VH + R +
Sbjct: 182 GFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRM 241
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V T ++ MY++ +D A VF M R+ +W +I+GFA+NG +A+D+F + +
Sbjct: 242 DVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQ 301
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD-YGIVPSMKHY-----VSIVDML 557
GL+P + AC+++G F + K +G + + +++DM
Sbjct: 302 ADGLQPCSWALVSALLACASVG--------FLKLGKSIHGFILRRLEWQCILGTAVLDMY 353
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+ A + K+ D+ +W ++ C HG
Sbjct: 354 SKCGSLESARKLFNKLS-SRDLVLWNAIIACCGTHG 388
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 225/400 (56%), Gaps = 14/400 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G +A+EV +++ + D T ++ A L++ K +H + R L
Sbjct: 438 VHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEG 497
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S N ++ MY+ C S++DA+ +F+ R+L W MI+ + +G GE AV++F + K
Sbjct: 498 SISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDE 557
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ + ACS G V EG E M +Y + P +HY +VD+LG L+E
Sbjct: 558 KIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEE 617
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD---PSRLNEKSKAGLV 622
A + ++ M EP +VW L+ CR+H N E+G+ AE + +LD P N + +
Sbjct: 618 AYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPG--NYVLVSNVF 675
Query: 623 PVNASELAKEKENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
N E+ ++ L +EV +K+H + + D HPE DKIY + +
Sbjct: 676 AANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVT 735
Query: 675 AQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++K E GY+ +T+FVLH++ +E K + L HSERLA+++GLL++ PIR+ KNLRVC
Sbjct: 736 EKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVC 795
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCHS ++S+ RELI+RDA RFHHFKDG+CSC D+W
Sbjct: 796 GDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNG 450
+A+E+L L+ + + VD ++ AC L + K +H + R L P+ N
Sbjct: 345 QALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV---LQNT 401
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I+ +Y EC +D A +F ++ +D+ SW +MI+ + NGL A+++FS K+ GL+PD
Sbjct: 402 IIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461
Query: 511 DQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ + SA +L + +G +H + K + + S+ + ++VDM G +++A +
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYK- 518
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHG 593
I ++ +W +++ MHG
Sbjct: 519 IFTCTKNRNLILWTAMISAYGMHG 542
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G EA+ + + K + + TF+ +QAC D+ ++ +H + + L V
Sbjct: 139 GMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVA 198
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY M +A +F N+ +D+ +W++M+TGF +NGL +A++ F + A LK
Sbjct: 199 NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLK 258
Query: 509 PDDQIFIGVFSACSALGDVVEG 530
PD I + A LG ++ G
Sbjct: 259 PDQVSIISIIVASGRLGYLLNG 280
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
D +E S + N + G V G+ A+E+ + +S D TF L++ACG
Sbjct: 16 DKMSERSIFTWN----AMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIV 71
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTM 482
+ L +H + V N ++ +Y++C+ ++ A +F M R D+ SW+++
Sbjct: 72 EDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSI 131
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
I+ ++ NG+ +A+ +FS+ +AG+ + F AC
Sbjct: 132 ISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQAC 170
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G ++ G EA+E L+ + D + ++ A G L K +H + +
Sbjct: 232 MLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNG 291
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C M F M +DL SW T G+A+N A+++
Sbjct: 292 FDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLR 351
Query: 501 QFKQAGLKPDDQIFIGVFSAC---SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
Q + G+ D + + AC + LG + E +H ++ P +++ +I+D+
Sbjct: 352 QLQMEGMDVDATMIGSILLACRGLNCLGKIKE--IHGYTIRGGLS-DPVLQN--TIIDVY 406
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKS 617
G G +D A+ E + + DV W +++ C +H L ++ E+ + + L E
Sbjct: 407 GECGIIDYAVRIFESIECK-DVVSWTSMIS-CYVHNG--LANKALEVFSSMKETGL-EPD 461
Query: 618 KAGLVPV-----NASELAKEKE 634
LV + + S L K KE
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKE 483
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY +C S+ DA +F M+ER + +W+ M+ G+ NG A++++ + + G+ D
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F + AC + D+ G ++ YG + S+V + ++ A + ++M
Sbjct: 61 FPVLLKACGIVEDLFCGA-EIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 574 PMEPDVDVWEKLMN 587
+ DV W +++
Sbjct: 120 YVRNDVVSWNSIIS 133
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 233/397 (58%), Gaps = 19/397 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--N 449
++AI VL ++ + ++ + TF ++ AC AL++ + +HE + L L Y
Sbjct: 260 RDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLT 319
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MYS+C ++ A ++F + DL W+++I A++G E A+++F + + GL+P
Sbjct: 320 ALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
F V ACS G + +G HF S D+GI P +H+ +VD+LG G++ ++ +
Sbjct: 380 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDL 439
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV 622
+ MP EP W + CR + N++ AE + QLDP + N +KAG
Sbjct: 440 LLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSNMYAKAG-- 497
Query: 623 PVNASELAKEKENKKL------ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
S++A+ ++ +L A ++ +EV+ +VHE+ +GD HP +I+A ++ L
Sbjct: 498 --RWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 555
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
MK AGY+P+T VLHD+ QE KE + HSE+LA++ LL++P +PIR++KNLRVC DC
Sbjct: 556 MKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDC 615
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A K ISK+V RE+++RD RFH F++G CSC DYW
Sbjct: 616 HTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S + AC DA+ + +++ + ++ +Y + DA SVF M+
Sbjct: 79 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMS 138
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD+ +W M+ +A+NG +A+ +F Q G+ P+ + AC++LGD+ G L
Sbjct: 139 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 198
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ + GI + ++V++ G G ++ A E ++ +E +V W +
Sbjct: 199 MHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-VEKNVVAWSAI 249
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 8/236 (3%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G +EA+ + ++ ++ + T + AC L +H+ VE V
Sbjct: 154 RNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVV 213
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ +Y +C ++ A F + E+++ +W + +A+N DA+ + + G
Sbjct: 214 VGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 273
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
L P+ F+ V AC+A+ + +G +H G+ + ++V+M G L
Sbjct: 274 LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLAL 333
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSRLNEKS 617
A +K+ D+ +W L+ HG LEL +R +E L P+ + S
Sbjct: 334 AGNMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELFERMR--LEGLQPTIITFTS 386
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ +Y++CD DDA +VF + +++ SW M+ FA+N + F G+
Sbjct: 14 NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73
Query: 509 PDDQIFIGVF-SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
P ++ I +F SAC+ ++ G + GI ++V + G G+ +A
Sbjct: 74 P-GEVGISIFLSACTDAREITIGR-SIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAA 131
Query: 568 EFIEKMPMEPDVDVWEKLM 586
+M DV W ++
Sbjct: 132 SVFLRMS-HRDVVAWSAMV 149
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 230/403 (57%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +E +++ ++++ FS +++C A + H + ++
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MY++C +++A VF M D SW+ +I ++G G +AVD++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYE 507
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++PD F+ V +ACS G V +G +F SM Y I P HY ++D+L +
Sbjct: 508 EMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRS 567
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G EA IE +P +P ++WE L++ CR+HGN+ELG A+ + L P S
Sbjct: 568 GKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ + +L +++ KK + + +E+ ++VH + DTSHPE + +Y ++
Sbjct: 628 NMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQ 687
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEG-KEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +M+ GY+P+T FVLHD++ +G KE+ L HSE++AV+ GL+ P IRI KNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R CGDCH+ + +SK+V R++I+RD KRFHHF++G CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G +EA+E++ + I +D T+ +++AC +A+ L+ K VH +V R
Sbjct: 257 MISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR- 315
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT------------------- 481
N ++ +Y +C ++A ++F M +DL SW+
Sbjct: 316 EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 482 ------------MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
MI+G A+NG GE+ + +FS K+ G +P D F G +C+ LG
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G F + G S+ +++ M G ++EA + MP V W L+
Sbjct: 436 GQ-QFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALIAAL 493
Query: 590 RMHGN-LELGDRCAEIVEQ-LDPSR------LNEKSKAGLV 622
HG+ +E D E++++ + P R L S AGLV
Sbjct: 494 GQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLV 534
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 458 CDSMDDAF--SVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
C S D A SVF + ++ RD ++ MITGF+ N G A+++F + K G KPDD
Sbjct: 91 CASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFT 150
Query: 514 FIGVFSACSALGDVVEGMLHFE--SMSKDYGIVPSMKH-YVSIVDMLGST-GYLDEALEF 569
+ V + + + D + + F ++ G V S+ + VS+ S+ L A +
Sbjct: 151 YASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKV 210
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
+ +P E D W +M +G +LG E+++ +D
Sbjct: 211 FDDIP-EKDERSWTTMMTGYVKNGCFDLGK---ELLKGMD 246
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 238/402 (59%), Gaps = 14/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH--EHVERLLS 441
G K G+ ++A+ + + + I D T S ++ +C +L +AVH + L +
Sbjct: 296 GYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNN 355
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L VS+ ++ MYS+C +DDA SVF+ M R++ SW+ MI G A+NG +DA+++F
Sbjct: 356 NLLVSS--ALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
Q KPD+ FIG+ SAC + +G +F+S++ +G+ P++ HY +V++LG TG
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTG 473
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+++A+ I+ M +PD +W L+++C G++ + A + +LDP+ N
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533
Query: 615 EKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ G AS L K K KK A + +E+ ++VH + + D +HPE++ IY +
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSP-ARAPIRIMKNLR 731
L +++E G+ P T VLHD+ ++ K +++ HSE+LA++ GL+ P +PIRI+KN+R
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH +K S+I+GR++I+RD+ RFHHF G CSC D W
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 439 LLSPLRVS-------TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
LL +R+S T + I+ Y +C +D+A VFS E+D+ W M+ G+AKNG
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHY 550
EDA+ +F++ ++PD V S+C+ L + G +H +S+ G+ ++
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA--GLNNNLLVS 360
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+++DM G++D+A MP +V W ++ C +G+
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGH 403
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 33/315 (10%)
Query: 287 DTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGN 346
D+ H Q L H FG +++ + + + + W+ Y + SG+
Sbjct: 57 DSFLHNQLL--HLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAK----------SGS 104
Query: 347 IQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCI 406
IQN K D S N T+ G +E++E+ ++++
Sbjct: 105 IQN----------LKATFDRMPFRDSVSYNTTIAGFSG---NSCPQESLELFKRMQREGF 151
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
T ++ A L K +H + V +N + MY++C ++ A
Sbjct: 152 EPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARW 211
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F +T+++L SW+ MI+G+AKNG E + + Q + +G PD + +A G
Sbjct: 212 LFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGR 271
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM---EPDVDVWE 583
V E F K+ IV + +++ G ++AL +M + EPD
Sbjct: 272 VDEARRVFSEF-KEKDIVC----WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLS 326
Query: 584 KLMNLCRMHGNLELG 598
+++ C +L G
Sbjct: 327 SVVSSCAKLASLHHG 341
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 88/188 (46%), Gaps = 35/188 (18%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
++QL+ C + +AK + H+E L P +N +L +Y++ + DA ++F
Sbjct: 24 AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83
Query: 471 MTERDLTSWDTMITGFAKNG-------------------------------LGEDAVDIF 499
M +RD+ SW+ +++ +AK+G ++++++F
Sbjct: 84 MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ ++ G +P + + + +A + L D+ G +H + +++ + ++ + ++ DM
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNF--LGNVFIWNALTDMYA 201
Query: 559 STGYLDEA 566
G +++A
Sbjct: 202 KCGEIEQA 209
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 234/412 (56%), Gaps = 29/412 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE---EAKAVHEHVE 437
+ G G ++A+++ ++ + + D T ++ AC AL+ A ++ + E
Sbjct: 287 MIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNE 346
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L +P+ + ++ MYS+C S+ A+ +F+ M +D W+ M+ G + NG +
Sbjct: 347 FLSNPVLGT---ALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFS 403
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+FS ++ G++PD+ FIG+ C+ G V EG F +M + + + PS++HY +VD+L
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLL 463
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------- 610
G G L+EA + I MPM+P+ VW L+ C++H + L ++ + + +L+P
Sbjct: 464 GRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYV 523
Query: 611 ---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHP 661
R E K KE++ +K+ + + +E+ VHE+ GD SH
Sbjct: 524 QLSNIYSGNHRWEEAEKI-------RSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHW 576
Query: 662 ETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR 721
++KIYA + L ++K G++P T FVL DI++E KE L HSE+LAV+ GL++SP
Sbjct: 577 LSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPN 636
Query: 722 APIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IR++KNLRVCGDCH A+K+ISKI RE+IIRD RFH F DG CSCRDYW
Sbjct: 637 HVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EAI L + + D + +++ AC + + ++
Sbjct: 187 ITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGM 246
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V +L MY +C +++ A +FS M E+D+ SW TMI G+A NGL + A+D+F Q
Sbjct: 247 GRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQ 306
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV-PSMKHYVSIVDMLGST 560
+ LKPD +GV SAC+ LG + G+ M ++ + P + +++DM
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKC 364
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
G + +A E M + V VW +M M+G+ + +VE+
Sbjct: 365 GSVTQAWEIFTAMKRKDRV-VWNAMMVGLSMNGHAKAVFSLFSLVEK 410
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV + +AI + G + + T +++AC + +H + +
Sbjct: 85 MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V +L +Y +CD+ DDA VF ++ ++++ SW +ITG+ +G +A+ F
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFK 204
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GLKPD + V +AC+ LGD G + D G+ ++ S++DM
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEW-IDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L+ A MP E D+ W ++
Sbjct: 264 GNLERANLIFSAMP-EKDIVSWSTMI 288
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VFS + E ++ W+TMI G +DA+ ++ + G P++ V AC+ D
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V G L S+ G + S++ + D+AL+ + +P + +V W ++
Sbjct: 130 VRLG-LKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAII 187
Query: 587 N 587
Sbjct: 188 T 188
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 224/401 (55%), Gaps = 17/401 (4%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPL 443
V+ GK EA+E ++ Q + T ++ A + AL ++ H R L +
Sbjct: 269 VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV 328
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
VS+ ++ MY++C + DA +F M R++ SW+ MI G+A G +AV +F
Sbjct: 329 YVSS--ALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSML 386
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ KPD F + +AC+ G EG +F+ M +YG+ P M+HY +V +LG G L
Sbjct: 387 KCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKL 446
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
DEA + I MP EPD +W L+ CR+HGN++L + AE + L+P N + L
Sbjct: 447 DEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPE--NAGNYVLLSN 504
Query: 624 VNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AS E+ K+ KK + +E+++KVH AGD SHP I I
Sbjct: 505 IYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQ 564
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L QM++ G++P T FVLHD++++ K++ L HSE+LAV+ GL+S+ +R++KNLR+
Sbjct: 565 LNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRI 624
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH A+K IS GRE+ +RD RFHHF G CSC D+W
Sbjct: 625 CGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G+ ++A+ L + + + D S + A GD + + +H + +
Sbjct: 128 VSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAG 187
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ MY +C + VF + D+ S + +I G ++N +A+ +F
Sbjct: 188 CRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFK 247
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
+F G++ + + + + C G +E + F M
Sbjct: 248 EFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM 284
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 242/407 (59%), Gaps = 20/407 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCIS-VDLPTFSQLMQACGDAKALEEAKAVHEHV--ER 438
+ GLV+ G + + + ++ + VD S ++ AC + L K +H V
Sbjct: 208 ISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSG 267
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
S L +S N ++ MY++C + A +VF+ M RD+ SW ++I G A++G ++A+D+
Sbjct: 268 YESCLFIS--NALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDL 325
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ Q A +KP++ F+G+ ACS G V +G F++M +DY I PS++ + +D+L
Sbjct: 326 YDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLS 385
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
+G+L+EA + I+ MP +PD W L++ C+ HGN E+G R A+ + L+ ++E S
Sbjct: 386 RSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLN---MHEPST 442
Query: 619 AGLVP------------VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
L+ +L + E K+ + +++ + + AG+T HP D+I
Sbjct: 443 YVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEI 502
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
+ L++ L A+M++ GYIP+T +VLHD++++ KE L HSER AV++GLL + IRI
Sbjct: 503 FGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRI 562
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLR+CGDCH+ LK+ S IV +E+I+RDA R+HHFKDG CSC D+W
Sbjct: 563 VKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDFW 609
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERL----LSPLRVSTYNGILKMYSECDSMDDAF 465
+P++ ++ C +A AK +H + + PL N +L Y +C+ + DA
Sbjct: 2 IPSYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLP----NTLLDAYGKCNLLQDAH 57
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACSAL 524
+F M +RD SW +++T + + L + IF F L+PD ++ + AC++L
Sbjct: 58 YLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASL 117
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYV---SIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+ G + + + + P + V S+VDM G A + + ++ V
Sbjct: 118 CSLRLG----KQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVS- 172
Query: 582 WEKLMN 587
W +++
Sbjct: 173 WTAMLS 178
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS--TYNGILKMYSECDSMDDAFSVFS 469
++ L++AC +L K VH +LSP + ++ MY++C A SVF
Sbjct: 106 VYATLLKACASLCSLRLGKQVHARF--VLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFD 163
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
++ + SW M++G+A++GL ++A+++F + L + G+ + G ++
Sbjct: 164 SILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQS----GYCID 219
Query: 530 GMLHFESMSKD 540
G F M ++
Sbjct: 220 GCYMFIEMRRE 230
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ +L Y+ D+A +F R+L SW +I+G ++G D +F + ++ G
Sbjct: 172 SWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREG 231
Query: 507 LKPDDQIFI-GVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+ D + + V AC+ L + G +H + Y + + ++VDM +
Sbjct: 232 VDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISN--ALVDMYAKCSDIL 289
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDPSRLNEKSKAG 620
A +M + DV W ++ HG L+L D+ ++ ++ P NE + G
Sbjct: 290 AARNVFNRM-LHRDVVSWTSIIVGAAQHGRAKEALDLYDQ--MVLAEIKP---NEVTFVG 343
Query: 621 LV 622
L+
Sbjct: 344 LI 345
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 228/408 (55%), Gaps = 47/408 (11%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ + L + K +H + R V + ++ MY++C +DD+ VF +
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQ------------------------------ 501
+ D SW+++I G +NG+ ++ + F Q
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 502 ------FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVD 555
+ G+KP+ F+ V +ACS G V E +F SM++DY I+P ++HY ++ D
Sbjct: 358 QLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 417
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-- 613
+LG G L+EA EFI M +EP VW L+ CR+H N+EL ++ ++ + +DP +
Sbjct: 418 LLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGA 477
Query: 614 -----NEKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
N S AG +A +L ++K KK + + +E+++KVH + AGD SHP D+
Sbjct: 478 YVLLSNIYSAAGRWK-DARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDR 536
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
I ++ L QM+ GY+ +T VLHD+++E K L +HSERLA++ G++S+PA IR
Sbjct: 537 INEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIR 596
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLRVC DCH+A K ISKIVGRE+++RD RFHHFKDG CSC D+W
Sbjct: 597 VTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 38/247 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD--------- 462
F ++++C K L ++VH + RL + T N ++ MYS+ S++
Sbjct: 108 VFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVF 167
Query: 463 ------DAFS--------------VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
D +S VF M +RD+ SW+T+I+G A+NG+ EDA+ + +
Sbjct: 168 DEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM 227
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
A L+PD V + ++++G +H ++ Y + S++DM
Sbjct: 228 GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGS--SLIDMYAKCT 285
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE--IVEQLDPSRLNEKSKA 619
+D++ +P + W ++ C +G + G + + ++ ++ P N S +
Sbjct: 286 RVDDSCRVFYMLPQHDGIS-WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKP---NHVSFS 341
Query: 620 GLVPVNA 626
++P A
Sbjct: 342 SIMPACA 348
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 416 LMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
L+Q K+ +AK +H + R L SP +ST IL +YS + + D+ +F+++
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST---ILSIYSNLNLLHDSLLIFNSLPS 67
Query: 474 RDLT-SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
T +W ++I + +GL ++ F Q +G PD +F V +C+ + D+
Sbjct: 68 PPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDL 122
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 240/401 (59%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G+ + A+ +L ++ I + T + C + ++L K +H +V R
Sbjct: 284 ISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWF 343
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V+ ++ +Y++C ++ + VF+ M +D+ +W+TMI + +G G +++ +F++
Sbjct: 344 IEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNK 403
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+G++P+ FIGV S CS EG+L F SMS ++ I P HY +VD+L G
Sbjct: 404 MLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAG 463
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------LNE 615
L+EA +FI KMP+EP W L+ CR++ N+ELG A + +++P L+
Sbjct: 464 RLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSN 523
Query: 616 KSKAGLVPVNASELAKEKENKKLAS---QNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
V ASE+ K +K LA ++ ++V++KV+ + GD S+ + D IY +
Sbjct: 524 ILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDE 583
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +M+ GY P T FVL ++DQE +EE L +HSERLAV+ G+L+S + +R+ KNLR+
Sbjct: 584 IDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRI 643
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K+I+KIVG ++I+RD+ RFHHF+DG C+C D+W
Sbjct: 644 CGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 452 LKMYSECDSMDD---AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+K+ C + D A +F + E DL +W +I+G ++G + A+DI+S ++
Sbjct: 15 IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74
Query: 509 PDDQIFIGVFSACSALGD-VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
PD + + V AC+A GD VV +H +++ +G + +++DM G +++ A
Sbjct: 75 PDKFVLLSVAKACAASGDLVVAKKIHDDAIQ--FGFNKDLVLGNALIDMFGKCKFVNGAR 132
Query: 568 EFIEKMPMEPDVDVWEKL 585
+ M ++ DV W +
Sbjct: 133 CVFDDMVVK-DVVSWTSM 149
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G K+AI++ L + + D + +AC + L AK +H+ +
Sbjct: 49 ISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGF 108
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ M+ +C ++ A VF +M +D+ SW +M + G+ + +F +
Sbjct: 109 NKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFRE 168
Query: 502 FKQAGLKPDDQIFIGVFSACS---ALGDVVEGMLHFESMSKDYGIVPSMKHYVS--IVDM 556
G++ + + AC+ LG V G + M + YVS +V+M
Sbjct: 169 MGLNGIRANSLTVSSILPACADYIKLGREVHGFILRNEMEGNV--------YVSSALVNM 220
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
S+ L +A + M D+ W ++
Sbjct: 221 YASSLGLKQARLVFDSM-YHRDIVSWNVMLT 250
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ AC D L + VH + R V + ++ MY+ + A VF +M
Sbjct: 180 TVSSILPACADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM 237
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG--DVVE 529
RD+ SW+ M+T + N E + +F Q ++ G+K + + S C G ++
Sbjct: 238 YHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELAL 297
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD------EALEFIEKMPMEPDVDVWE 583
G+L +D GI P + ++IV L L+ E ++ + DV +
Sbjct: 298 GIL---CKMQDSGIKP---NRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITT 351
Query: 584 KLMNLCRMHGNLEL 597
L+ L G+LEL
Sbjct: 352 ALVLLYAKCGDLEL 365
>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
Length = 517
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 223/402 (55%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G A+ + ++ D + ++ +C + ALE ++VH R
Sbjct: 116 VTGLARAGSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGH 175
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+S N ++ MY++ S+ DA +VF M R +W +I G+A+NG G +++ +++
Sbjct: 176 EPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYAD 235
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++G +PD F+G+ ACS G + G HF+SM ++GI P HY +VD+LG G
Sbjct: 236 MARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAG 295
Query: 562 YLDEALEFIEKMPM-EPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
L EA++ +++ P E D VW+ L+ CR H N L +R A +V +LDP S
Sbjct: 296 RLGEAVDLLDRSPAAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLS 355
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L +++ L + + K + + V H + AGD H +IY
Sbjct: 356 NLYSRARRWGDVARVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAE 415
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ A+++ G++P+T + L D EG+E L H ERLAV+ GLL+ PA APIR+ KNLR
Sbjct: 416 EMAARIRARGHVPDTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLR 475
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A+K+++++ GRE+I+RD+ FHH KDG CSC DYW
Sbjct: 476 VCGDCHAAIKMVAEVYGREIILRDSNCFHHMKDGSCSCGDYW 517
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ Y++ + A +VF M RD+ +W +++TG A+ G AV + AG+
Sbjct: 82 NALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVA 141
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D+ V S+C+ +E + + G P + S+V M TG L +A
Sbjct: 142 TDEFAVAAVLSSCAG-STALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDART 200
Query: 569 FIEKMPMEPDVDVWEKLM 586
+ M + W L+
Sbjct: 201 VFDAMRSRCAI-TWTALI 217
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 217/378 (57%), Gaps = 17/378 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST---YNGILKMYSECDSMDDAFSVF 468
TF+ + ACG + LE+ + +H + L+ S+ N +L M+ S+++A VF
Sbjct: 126 TFTGVFNACGVVEDLEQGREIHA-LAMASGELKSSSPILENALLNMFVRFGSLEEARKVF 184
Query: 469 SNMTERDL----TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
M D SW MI A++G G++A+++F + G+ D FI V ACS
Sbjct: 185 DAMDHPDAFSNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHA 244
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G + E + F SM +DY I P+ HY +D +G G L +A E I MP P+ W+
Sbjct: 245 GLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETVTWKT 304
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV---------PVNASELAKEKEN 635
L+N CR+H E + AE++ +L P + G V + + ++
Sbjct: 305 LLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSMTDRGL 364
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
KK+ ++ +EV++KVHE+ AGD +HP D+I + L +M+EAGY+P T+ VLH +++
Sbjct: 365 KKVPRKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNE 424
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE+ + HSE+LA++ GL+++P P+ I+KNLRVC DCH+A K+I+KI+ R +++RD
Sbjct: 425 EEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRD 484
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHH +DG CSC+DYW
Sbjct: 485 THRFHHLEDGQCSCKDYW 502
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S + +C K+ E +H + + N ++ Y++C + +A +F M
Sbjct: 21 TISVALSSCSSLKSFERGARIHRWADEHGYGSNLLVQNALVNFYAKCSKIPEAMKLFGEM 80
Query: 472 TE---RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDV 527
+E R + SW MI +A +G G++A+ +F + ++ G ++P+ F GVF+AC + D+
Sbjct: 81 SERTSRTVVSWSAMIGAYALHGRGQEALLLFHRMRKDGRVEPNAMTFTGVFNACGVVEDL 140
Query: 528 VEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV----DVW 582
+G +H +M+ S ++++M G L+EA + + M PD W
Sbjct: 141 EQGREIHALAMASGELKSSSPILENALLNMFVRFGSLEEARKVFDAMD-HPDAFSNSVSW 199
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLD 609
++ HG GD E+ ++++
Sbjct: 200 TAMIAALAQHGQ---GDEALELFKEMN 223
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 223/368 (60%), Gaps = 10/368 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ C AL + K +H + + + V+ + ++ MY++C ++ + +VF M
Sbjct: 511 TLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-----LKPDDQIFIGVFSACSALGD 526
+ R++ +W+ +I + +G GE+A+ +F + + G ++P++ +I +F++ S G
Sbjct: 571 SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGM 630
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME-PDVDVWEKL 585
V EG+ F +M +GI P+ HY +VD+LG +G ++EA I+ MP VD W L
Sbjct: 631 VDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSL 690
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLE 645
+ C++H NLE+G+ A+ + LDP+ L+ +K ++ KEK +K + +E
Sbjct: 691 LGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSML----GRKMKEKGVRKEPGCSWIE 746
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
+VH++ AGD SHP++ +++ + L +MK+ GY+P+T VLH++ +E KE L H
Sbjct: 747 HGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGH 806
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SERLA++ GLL++ IR+ KNLRVC DCH A K ISKIV RE+I+RD +RFHHF++G
Sbjct: 807 SERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNG 866
Query: 766 LCSCRDYW 773
CSC DYW
Sbjct: 867 TCSCGDYW 874
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 38/263 (14%)
Query: 393 EAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
EAIE+ + ++ + +S + T S ++ AC ++ + + +H V + N +
Sbjct: 372 EAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNAL 431
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--------- 502
+ MYS ++ A S+F +M +D+ SW+TMITG+ G +DA+++
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI 491
Query: 503 ---------KQAGLKPDDQIFIGVFSACSALGDVVEGM-LHF----ESMSKDYGIVPSMK 548
K LKP+ + V C+AL + +G +H + +SKD + ++
Sbjct: 492 NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSAL- 550
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN----LELGDRCAEI 604
VDM G L+ + E+M + +V W L+ MHG L+L R +
Sbjct: 551 -----VDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRR---M 601
Query: 605 VEQLDPSRLNEKSKAGLVPVNAS 627
VE+ D +R ++ + + AS
Sbjct: 602 VEEGDNNREIRPNEVTYIAIFAS 624
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
F +++A + L K +H HV + L + N ++ MY +C +D A VF +T
Sbjct: 88 FPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEIT 147
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
RD SW++MI + E AV +F + P + V ACS +++ G+L
Sbjct: 148 NRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACS---NLINGLL 204
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 412 TFSQLMQACGD-AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T + AC + L K VH V R R T N ++ MY++ + +A ++F
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRN-GDWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
++DL SW+T+I+ ++N E+A+ Q+G++P+ V ACS L
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L + + +EA+ L ++ + + + T + ++ AC + L K +H V + +
Sbjct: 259 ISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFV-LMNN 317
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +++ G ++ MY C + VF M R + W+ MI G+ +N +A+++F
Sbjct: 318 DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELF 377
Query: 500 SQFK-QAGLKPDDQIFIGVFSAC 521
+ + GL P+ V AC
Sbjct: 378 VEMVFELGLSPNSVTLSSVLPAC 400
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 235/390 (60%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+AI + +E + + +L T++ ++ AC AL E K +H+ V+ P V+ ++
Sbjct: 212 KAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALV 271
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY++C S +A +VF++ +++ +W ++++ +++ G + ++ + + G+ PDD
Sbjct: 272 NMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDV 331
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F +F+ACS G EG+L+F +M +D+ IVP HY ++D+LG G L EA E +
Sbjct: 332 TFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRT 391
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MP PDV W L++ C+++G+L++G R + + +L+P G + A + A
Sbjct: 392 MPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADV 451
Query: 633 KENKKLASQ---------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
E KK+ Q +++E + ++HE+ GDT+HP +I A ++ + Q+ AGY
Sbjct: 452 AEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYE 511
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T+ VL D+++E K E LL HSER+A+ GLL+S A A + I+KNLR+C DCHS K++
Sbjct: 512 PDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLV 571
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SK++ R++++RD+ RFH F+ G CSC DYW
Sbjct: 572 SKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 601
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH----EHVERLLSPLRVSTY 448
EA E+ + + I D+ ++ + C + E +A+H H R +P+
Sbjct: 115 EAYELYKKMLSEGIMPDIYAYAAALAVC---PTIREGEAIHVKLGNHERR--TPV---CS 166
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY + A VF + +DL S++ MI FAK G A+ ++ + + L+
Sbjct: 167 NALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLE 226
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHY-VSIVDMLGSTGYLDEA 566
P+ + V ACS LG + EG +H + D P+ Y ++V+M G EA
Sbjct: 227 PNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQ---PTDVAYNTALVNMYAKCGSAHEA 283
Query: 567 LEFIEKMPMEPDVDVWEKLMN 587
++ +V W LM+
Sbjct: 284 RAVFNDCGLK-NVFTWTSLMS 303
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 412 TFSQLMQAC---GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
T+ ++++C GD LE+ K +H H + N ++ MY++C S A VF
Sbjct: 31 TYVTVLKSCAHLGD-DYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVF 89
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
M ++L S+ +MI + +A +++ + G+ PD + + C +
Sbjct: 90 DKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTI 145
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 219/375 (58%), Gaps = 12/375 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + +++AC LE + VH HV + L ++ N +L MY +C S++DA +F
Sbjct: 214 DQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKCGSLEDANLLF 271
Query: 469 SNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
+ M TE+D+ SW TMI G A+NG DA+ +F K G KP+ +GV ACS G V
Sbjct: 272 TRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLV 331
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G +F+SM + +GI P +HY I+D+LG G LDEA++ I +M EPD W L+
Sbjct: 332 NDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLG 391
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKE-NKKLASQNL--- 643
CR+H N++L A+ + +LDP+ + N+ + E +K+ ++ +
Sbjct: 392 ACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKD 451
Query: 644 -----LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+EV +VH + GD SHP ++I + L ++ GY+P+T FVL D++ E
Sbjct: 452 PGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQM 511
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E++L HSE+LA+ GL+S P + I I KNLR+CGDCH K++S++ R ++IRD R
Sbjct: 512 EDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIR 571
Query: 759 FHHFKDGLCSCRDYW 773
+HHF+ G+CSC DYW
Sbjct: 572 YHHFRGGVCSCGDYW 586
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A++ L L+ ++ + ++ T+S +++AC L + +H + ++ V + ++
Sbjct: 100 KALDFLILMLREGVRPNMYTYSSVLRAC---DGLLNLRQLHGSILKVGLESDVFVRSALI 156
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
YS+ DA +VF+ M DL W+++I GFA+N G++ + ++ + K+A D
Sbjct: 157 DTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQS 216
Query: 513 IFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V AC+ L + G +H + D ++ + +++DM G L++A
Sbjct: 217 TLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNN----ALLDMYCKCGSLEDANLLFT 272
Query: 572 KMPMEPDVDVWEKLM 586
+M E DV W ++
Sbjct: 273 RMMTEKDVISWSTMI 287
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+S D T+S+L++ C A+++A+ VHEHV + N ++ MY + +D+A
Sbjct: 12 LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
++F M +R++ SW TMI+ ++ + L A+D + G++P+ + V AC L
Sbjct: 72 NLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLL 131
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
++ + LH + G+ + +++D G +AL +M + D+ VW +
Sbjct: 132 NLRQ--LHGSILK--VGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVVWNSI 186
Query: 586 M 586
+
Sbjct: 187 I 187
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 233/404 (57%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +E+I + L+ + D T L+ +C AL+ +H++ +
Sbjct: 198 ISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGF 257
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V ++ MY+ C ++ A VF +M ER++ +W MI+G+ +G G A+++F++
Sbjct: 258 DLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTE 317
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G +P++ F+ V SAC+ G + +G F SM + YG+VP ++H V +VDM G G
Sbjct: 318 MRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAG 377
Query: 562 YLDEALEFIEK-MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
L++A +FI+K +P EP VW ++ CRMH N +LG + AE V ++P
Sbjct: 378 LLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLS 437
Query: 614 NEKSKAGLVPVNASELAK----EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG ++ E+ + + KK + +E+ K + + GD SHP+T+ IY
Sbjct: 438 NIYALAG--RMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRY 495
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L + E+GY+P ++HD+++E ++ AL HSE+LA++ GLL + IRI+KN
Sbjct: 496 LDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKN 555
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCHSA+K IS I RE+I+RD RFHHFKDG CSC DYW
Sbjct: 556 LRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ +++AC D AL K +H HV + ++ +Y++ M A VF M
Sbjct: 127 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 186
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+R + +W+++I+G+ +NGL ++++ +F ++G +PD + + S+CS LG
Sbjct: 187 PQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGA----- 241
Query: 532 LHFESMSKDY----GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
L F DY G ++ S+++M G + +A E + M E +V W +++
Sbjct: 242 LDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVTWTAMIS 300
Query: 588 LCRMHG 593
MHG
Sbjct: 301 GYGMHG 306
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 202/329 (61%), Gaps = 9/329 (2%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+C +D A +VF +M +R+ SW +M++G+ +G G++A+DIF + ++AG PDD
Sbjct: 1 MYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDIS 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F+ + ACS G V +G+ +F+ M +DY +V S +HY ++D+L G LD+A + I++M
Sbjct: 61 FLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEM 120
Query: 574 PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS------ 627
PMEP +W L++ CR+H N+EL + + + + + NA
Sbjct: 121 PMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVA 180
Query: 628 ---ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIP 684
+L K+ KK + ++ + + GD SHP + +IY+L+ L ++K GY+P
Sbjct: 181 RIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVP 240
Query: 685 ETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIIS 744
ET F LHD+D E K L HSE+LA+++GLL++ PIRI KNLRVCGDCHSA IS
Sbjct: 241 ETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYIS 300
Query: 745 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KIV E+I+RD+ RFHHFK+G CSC YW
Sbjct: 301 KIVDHEIIVRDSSRFHHFKNGSCSCGGYW 329
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 238/404 (58%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G KEA+EV ++ + + T ++ A ALE K VH + R
Sbjct: 230 MIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNN 289
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY++C S++ A VF + +R++ +W T+I G A +G +D +D F
Sbjct: 290 IGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFE 349
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++AG+ P D +IG+ SACS G V EG F+ M + G+ P ++HY +VD+LG
Sbjct: 350 DMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRA 409
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L+E+ E I MP++PD +W+ L+ C+MHGN+E+G R AE + +L P + S
Sbjct: 410 GLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPH--DSGSYVA 467
Query: 621 LVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + AS + KE + +K + +E+ +HE+ D SHP++ KI+++
Sbjct: 468 LSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSM 527
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ + + GY P T VL ++D+E KE +L HSE++A++ GL+S+ + P+RI KN
Sbjct: 528 LQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKN 587
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCHS++K+ISKI R++I+RD KRFHHF +G CSC DYW
Sbjct: 588 LRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V +N ++ Y ++ A ++F M +R + SW+ MI G+A++G ++AV++F + +
Sbjct: 193 VVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQM 252
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
A + P+ + V A S LG + G +H ++ + G+ + +++DM G +
Sbjct: 253 AEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGS--ALIDMYAKCGSI 310
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++AL+ E +P + +V W ++ MHG
Sbjct: 311 EKALQVFEGLP-KRNVVTWSTIIAGLAMHG 339
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 227/373 (60%), Gaps = 14/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF + A D L + K +H + R S +V T ++ MY++ S++ A S+F
Sbjct: 205 TFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT--ALMDMYAKSGSVNVARSLFE 262
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ E+ + SW+ MITG+A +G +A+D+F + K L PD F+GV +ACS G + E
Sbjct: 263 LLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGVLAACSHGGLLNE 321
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G +HF SM D+ I P+++HY ++D+LG G L+EA + I +M +EPD VW L++ C
Sbjct: 322 GKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSC 381
Query: 590 RMHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLV--PVNASELAKEKENKKLAS 640
++HGN+E+G+ E + +L+P N ++AG +L K KK +
Sbjct: 382 KIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIA 441
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +EV +KVH + + DTSHP+++ IYA ++ MKEAGY P+ V HD++ + K +
Sbjct: 442 CSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVD 501
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+ HSERLA++ GL+S+ A + I+KNLR+C DCH A+K ISKI RE+ IRD R+H
Sbjct: 502 MVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYH 561
Query: 761 HFKDGLCSCRDYW 773
HFKDG+CSC D+W
Sbjct: 562 HFKDGVCSCGDFW 574
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 14/180 (7%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERL---LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
++ L+Q+C KA+E K +H + ++ +PL + ++ +Y C+S+ +A +F
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATK---LVNLYCICNSLTNAHLLFD 60
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+++R+L W+ MI G+A NG E A+ ++ Q + GL PD F V ACSAL + E
Sbjct: 61 RISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120
Query: 530 GMLHFESMSKDY---GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G + + KD G+ + +++DM G ++ A + +K+ E DV W ++
Sbjct: 121 G----KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSML 175
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFS 469
TF +++AC A+EE K +H+ V R S L + G ++ MY++C ++ A VF
Sbjct: 104 TFPFVLKACSALSAMEEGKKIHKDVIR--SGLESDVFVGAALIDMYAKCGCVESARQVFD 161
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ ERD+ W++M+ +++NG ++++ + GLKP + F+ +A + G + +
Sbjct: 162 KIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQ 221
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G S +G + K +++DM +G ++ A E + E V W ++
Sbjct: 222 GK-ELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITGY 279
Query: 590 RMHGN 594
MHG+
Sbjct: 280 AMHGH 284
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 230/404 (56%), Gaps = 12/404 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEK-QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G ++ G EAI V ++K + + TF ++ A AL++ +H +
Sbjct: 345 ITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTG 404
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ +Y++C +D+A +F R W+ +I+G +G G A+ +FS
Sbjct: 405 LNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFS 464
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q +Q G+ PD F+ + +ACS G V +G F M YGI P KHY +VDM G
Sbjct: 465 QMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRA 524
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G LD+A +FI MP++PD +W L+ CR+HGN+E+G ++ + +LDP +
Sbjct: 525 GQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMS 584
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGD--TSHPETDKIYAL 669
N +K G L + + +K + +EV+ V+ + +G+ HP+ ++I
Sbjct: 585 NMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRE 644
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L A+++ GY+P+ FVL D++++ KE+ L HSERLA++ G++++P R P+ I KN
Sbjct: 645 LLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKN 704
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+A K ISKI RE+I+RD+ RFHHFKDG CSC D+W
Sbjct: 705 LRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVST 447
G+V A+E+ + +S D+ T L A + ++VH + V R +
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAG 506
N I+ MY++ ++ A +F +M RD SW+T+ITG+ +NGL +A+ ++ K G
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
LKP F+ V A S LG + +G ++S G+ + ++D+ G LDEA
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGT-RMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA 428
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+ E+ P W +++ +HG+
Sbjct: 429 MLLFEQTPRR-STGPWNAVISGVGVHGH 455
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQAC---GDAKALEEAKAVHEHVE 437
L GL + + EA+ + G + + ++ D T S ++ C GD +AL A ++
Sbjct: 141 MLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD-RALALAMHLYAVKH 199
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L L V N ++ +Y + +++ VF M+ RDL +W+++I+G + G AV+
Sbjct: 200 GLDDELFVC--NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE 257
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + +G+ PD + + SA + GD+ G M + V + +IVDM
Sbjct: 258 MFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMY 317
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ A + MP+ D W L+
Sbjct: 318 AKLSKIEAAQRMFDSMPVR-DAVSWNTLIT 346
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFS 466
D TF L++A A+ A +H RL LR + ++ Y + DA+
Sbjct: 70 DAFTFPPLLRA---AQGPGTAAQLHACALRL-GLLRGDAFASGALVHAYLRFGRVRDAYR 125
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
F M RD+ +W+ M++G +N +AV +F + G+ D V C LGD
Sbjct: 126 AFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGD 185
Query: 527 VVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ +H ++ +G+ + +++D+ G G L+E + + M D+ W +
Sbjct: 186 RALALAMHLYAVK--HGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR-DLVTWNSI 242
Query: 586 MN 587
++
Sbjct: 243 IS 244
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 233/405 (57%), Gaps = 19/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G + G E+IE ++++ I + T S L++ CG L++ K +H R
Sbjct: 100 ISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSF 159
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ L V+T ++ YS+ ++ A VF + E+ L SW+ MI GFA NG G + + +
Sbjct: 160 IEDLYVAT--ALIDTYSKSGDLESAHKVFWS-AEKTLASWNCMIMGFAINGCGREVIALL 216
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++AG+ PD F + S C G V EG F+ MS DYGI P+++HY + D+LG
Sbjct: 217 DGMQRAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGR 276
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
GYLDEA +FI+ MP++PD VW ++ CR+HGN+E + A+ + +L+P N +
Sbjct: 277 AGYLDEAWDFIQTMPIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLEP--YNSANYV 334
Query: 620 GLVPVNA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
++ + A +L + K + +++ +VH + AG H + +IY
Sbjct: 335 LMLSLYAMSNRWEDVDRIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYY 394
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L +++K+ GY+P+ V +ID+E K + LL+H+E+LA+++GL+ + + APIR++K
Sbjct: 395 ELYQLVSELKKFGYLPDVNCVYQNIDEEEKVKMLLSHTEKLAITYGLIKTSS-APIRVIK 453
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
N R+C DCH+A K+IS + RE+ +RD RFHHFK G CSC DYW
Sbjct: 454 NTRICSDCHTAAKLISLVRSREIFLRDGVRFHHFKAGKCSCNDYW 498
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY + D + + ++F NM +++ +W+++I+G++ G + A + ++ K+ G+KPD
Sbjct: 1 MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ + + S G E + + K G+ P++ + +++ G E++E +M
Sbjct: 61 WNSLVAGYSMRGHTKEALALIHDI-KISGLTPNVVSWTALISGCSQNGNYSESIEAFVQM 119
Query: 574 P---MEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
++P+ L+ C G L L + EI
Sbjct: 120 QEEGIKPNSATISSLLRTC---GGLSLLQKGKEI 150
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 228/379 (60%), Gaps = 23/379 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ + S LR S ++ MY++C ++ A
Sbjct: 338 TMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS----LIDMYAKCGDIEAAH 393
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF++M R L++ + MI GFA +G A DIFS+ ++ G++PDD F+G+ SACS G
Sbjct: 394 QVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F SM+++Y I P ++HY ++D+LG G EA E I M MEPD +W L
Sbjct: 454 MLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSL 513
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKEKE 634
+ C+MHGN+ELG+ A+ + +++P N S L + A+ L +K
Sbjct: 514 LKACKMHGNVELGESFAQKLIKIEPE--NPGSYVLLSNIYATAGRWNEVANIRALLNDKG 571
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
KK+ + +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL +++
Sbjct: 572 MKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEME 631
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E K+ AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I R
Sbjct: 632 EEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 691
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHF+DG+CSC DYW
Sbjct: 692 DRTRFHHFRDGVCSCNDYW 710
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+ G G KEA+++ + K + D T ++ AC + +++ + VH ++ L
Sbjct: 207 ISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGL 266
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
S L++ N ++ +YS+C ++ A +F ++ +D+ SW+TMI G+ L ++A+ +F
Sbjct: 267 GSNLKI--VNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLF 324
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ ++G P+D + + AC+ LG + G +H + G+ + S++DM
Sbjct: 325 QEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYA 384
Query: 559 STGYLDEALEFIEKM 573
G ++ A + M
Sbjct: 385 KCGDIEAAHQVFNSM 399
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C K +E + +H HV +L L + + ++ MY + DA VF
Sbjct: 105 TFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGS 164
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
+ RD+ S W+ +I+G+A G ++A+D+F
Sbjct: 165 SHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFK 224
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +KPD+ + V SAC+ G + G S D+G+ ++K +++D+
Sbjct: 225 EMMKTNVKPDESTMVTVVSACAQSGSIQLGR-QVHSWIDDHGLGSNLKIVNALIDLYSKC 283
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A + + DV W ++
Sbjct: 284 GEVETACGLFQGLS-NKDVISWNTMI 308
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 215/372 (57%), Gaps = 11/372 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++ AC LE +++H H + + + ++ MY +C ++D+ F M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEG 530
E++L + +++I G+A G + A+ +F + G P+ F+ + SACS G V G
Sbjct: 373 EKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENG 432
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
M F+SM YGI P +HY IVDMLG G +++A EFI+KMP++P + VW L N CR
Sbjct: 433 MKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACR 492
Query: 591 MHGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVNASELAKEKEN---KKLASQ 641
MHG LG AE + +LDP L+ A A+ + +E + KK A
Sbjct: 493 MHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGY 552
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ + V+++VH ++A D SH +I ++ LR +M+ AGY P+ + L+D+++E K
Sbjct: 553 SWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAE 612
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
+ HSE+LA++ GL++ P PIRI KNLR+CGDCHS K +S V RE+I+RD RFH
Sbjct: 613 VSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 672
Query: 762 FKDGLCSCRDYW 773
FKDG+CSC+DYW
Sbjct: 673 FKDGICSCKDYW 684
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V +G+ KEAIE + + TF + AC D L+ +H V R V
Sbjct: 185 VTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDV 244
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S YNG++ Y +C + + +F+ M ++ SW +++ + +N E A ++ + ++
Sbjct: 245 SVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKE 304
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++ D + V SAC+ + + G +H ++ + ++ ++VDM G G ++
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA--CVERNIFVGSALVDMYGKCGCIE 362
Query: 565 EALEFIEKMP 574
++ + ++MP
Sbjct: 363 DSEQAFDEMP 372
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL-SPLRVSTYNGILKM 454
+ LGLL K IS ++ + VH + + L SP N ++ M
Sbjct: 7 DALGLLLKNAISTS---------------SMRLGRVVHARIVKTLDSPPPPFLANYLINM 51
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+ D + A V R++ SW ++++G A+NG A+ F + ++ G+ P+D F
Sbjct: 52 YSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTF 111
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
VF A ++L V G +++ G + + S DM T D+A + +++P
Sbjct: 112 PCVFKAVASLRLPVTGK-QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 575 MEPDVDVW 582
E +++ W
Sbjct: 171 -ERNLETW 177
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G A+ + ++ ++ + TF + +A + K +H +
Sbjct: 80 VSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V MY + DDA +F + ER+L +W+ I+ +G ++A++ F +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIE 199
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
F++ G +P+ F G +ACS
Sbjct: 200 FRRIGGQPNSITFCGFLNACS 220
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 237/398 (59%), Gaps = 26/398 (6%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVS 446
E L L ++ S + P T ++ AC A++ + +H ++++ L S LR S
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ MY++C ++ A VF++M + L+SW+ MI GFA +G + + D+FS+ ++ G
Sbjct: 340 ----LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 395
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++PDD F+G+ SACS G + G F SM++DY + P ++HY ++D+LG +G EA
Sbjct: 396 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 455
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
E I M MEPD +W L+ C+MHGN+EL + A+ + +++P N S L + A
Sbjct: 456 EEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPE--NPSSYILLSNIYA 513
Query: 627 SE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
S L K KK+ + +EV S V E+ GD HP+ +IY ++ +
Sbjct: 514 SAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEV 573
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
++EAG++P+T VL ++++E KE AL HSE+LA++ GL+S+ + I+KNLRVC +
Sbjct: 574 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 633
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH A K++SKI RE++ RD RFHHF+DG+CSC DYW
Sbjct: 634 CHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 136/304 (44%), Gaps = 12/304 (3%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H Q L + + +H + S Y Q+ ++ + + + + ++ + SY+ I
Sbjct: 87 HGQVLKLGFDLDLYVHTSLISMYVQN-----WRLEDAYKVFDRSSHR-DVVSYTALITGY 140
Query: 351 MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDL 410
+ + K D+ S N + G + G KEA+E+ + K + D
Sbjct: 141 ASRGDIRSAQKLFDEIPVKDVVSWN----AMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T+ ++ AC + ++E + VH V+ + N ++ +YS+C ++ A +F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ +D+ SW+T+I G+ L ++A+ +F + ++G P+D + V AC+ LG + G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + G+ + S++DM G ++ A + M + + W ++
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMIFGF 375
Query: 590 RMHG 593
MHG
Sbjct: 376 AMHG 379
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C +K E + +H V +L L + + ++ MY + ++DA+ VF
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
+ RD+ S W+ MI+G+A+ G ++A+++F
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ ++ V SAC+ G + G S D+G ++K +++D+
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGR-QVHSWVDDHGFDSNLKIVNALIDLYSKC 244
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A + + + DV W L+
Sbjct: 245 GEVETACGLFQGLSYK-DVISWNTLI 269
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 217/374 (58%), Gaps = 10/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D + ++ AC L+ K+VH ++ R L VS+ ++ MYS+C S+ A +VF
Sbjct: 306 DSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSS-TAVIDMYSKCGSLSFARTVF 364
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
++ RD SW+ +I + +G GE+A+ +F Q ++ +KPD F + SA S G V
Sbjct: 365 DQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVE 424
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G F M +Y I PS KHY +VD+L G ++EA E IE M EP + +W L++
Sbjct: 425 KGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSG 484
Query: 589 CRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLA 639
C HG +G+ A+ V +L+P S ++ ++ K+ KK+
Sbjct: 485 CLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVP 544
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+++EV K+H + D SH + ++I ++ L +MK GY+P+T FVLH++++E KE
Sbjct: 545 GYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKE 604
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
L HSERLA++ GLL++ + I KNLRVCGDCH A K ISKIV RE+++RD KRF
Sbjct: 605 RMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRF 664
Query: 760 HHFKDGLCSCRDYW 773
HHFKDG+CSC DYW
Sbjct: 665 HHFKDGVCSCGDYW 678
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
+ G + EA+ + + + + D T++ +++AC + L + V
Sbjct: 82 RRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVF 141
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+L +Y++C MD+A VF M RDL W TMITG A+NG +AVDI+ Q +
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201
Query: 507 LKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
++ D + +G+ AC+ LG G+ +H + KD I+ + S+VDM G+L+
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKD--IIMDVIVQTSLVDMYAKNGHLEL 259
Query: 566 ALEFIEKMPMEPDVDVWEKLMN 587
A +M + +V W L++
Sbjct: 260 ASCVFRRM-LYKNVISWSALIS 280
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G+ +EA+++ + K+ + D L+QAC + ++H ++ R
Sbjct: 177 MITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKD 236
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ MY++ ++ A VF M +++ SW +I+GFA+NG +A+ +
Sbjct: 237 IIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVV 296
Query: 501 QFKQAGLKPDDQIFIGVFSACS-----ALGDVVEGM----LHFESMSKDYGIVPSMKHYV 551
+ G KPD + V ACS LG V G LHF+ +S
Sbjct: 297 DMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSS-----------T 345
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+++DM G L A +++ + W ++ +HG+
Sbjct: 346 AVIDMYSKCGSLSFARTVFDQISFRDSIS-WNAIIASYGIHGS 387
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+++ Y+ ++ A VF + + +W+ MI +++ G +A+ ++ + G++PD
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ V AC+ D+ G + + D G + +++++ G +DEA+
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQ-AVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVF 163
Query: 571 EKMPMEPDVDVWEKLMN 587
+KM D+ W ++
Sbjct: 164 DKMG-RRDLVCWTTMIT 179
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 230/402 (57%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V+ G ++V + K + D+ TF + C A K +H + R
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +++MYS+C ++ +F VF M+ RD+ +W MI + G GE A++ F
Sbjct: 541 ESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVD 600
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++G+ PD +FI + ACS G V +G+ FE M Y I P ++HY +VD+L +
Sbjct: 601 MEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-----SRLNEK 616
+ +A EFI+ MP+EPD +W ++ CR G++E +R + + +L+P S L
Sbjct: 661 KISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 720
Query: 617 SKAGLVPVNASEL----AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A L + L ++K KK + +E+ KVH + +GD S P+++ I+ +
Sbjct: 721 AYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEI 780
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLA-HSERLAVSHGLLSSPARAPIRIMKNLR 731
L + M + GYIP++R V ++++E ++ L+ HSERLA++ GLL++ P+++MKNLR
Sbjct: 781 LYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLR 840
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCH K+ISKIVGRE+++RDA RFH FKDG+CSC+D W
Sbjct: 841 VCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ T + ++ ACG + L AK ++ ++ R L + N ++ +Y++C M A VF
Sbjct: 306 DILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVF 365
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
++M +D SW+++I+G+ ++G +A+ +F + D ++ + S + L D+
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLK 425
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G LH + GI + +++DM G + ++L+ M D W +++
Sbjct: 426 FGKGLHSNGIKS--GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVIS 482
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV--PVNASELAK 631
C G+ G ++ Q+ +++ LV P+ AS AK
Sbjct: 483 ACVRFGDFATG---LQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K G +A+E G L + +S D TF +++AC E V++ + + +
Sbjct: 83 KNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLY 142
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MYS + A VF M RDL SW+++I+G++ +G E+A++I+ + + +
Sbjct: 143 VGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSW 202
Query: 507 LKPDDQIFIGVFSACSALGDVVEG 530
+ PD V A + L V +G
Sbjct: 203 IVPDSFTVSSVLPAFANLLVVKQG 226
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 105/242 (43%), Gaps = 13/242 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G + EA+++ ++ D T+ L+ L+ K +H + +
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGI 439
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +S N ++ MY++C + D+ +F++M D +W+T+I+ + G + + +Q
Sbjct: 440 YIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ + PD F+ C++L G +G ++ ++++M G
Sbjct: 500 MRKNKVVPDMATFLVTLPMCASLAAKRLGK-EIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+ + E+M DV W ++ M+G G++ E + K+G+
Sbjct: 559 CLESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALE--------SFVDMEKSGI 606
Query: 622 VP 623
VP
Sbjct: 607 VP 608
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 451 ILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ YS + + SVF ++ +++ W+++I F+KNG A++ + + +++ + P
Sbjct: 45 LIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSP 104
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F V AC+ L D G L ++ + + G + ++VDM G L A +
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYKQI-LEMGFESDLYVGNALVDMYSRMGLLSRARQV 163
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++MP+ D+ W L++ HG E
Sbjct: 164 FDEMPVR-DLVSWNSLISGYSSHGYYE 189
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EA+E+ L I D T S ++ A + +++ + +H +
Sbjct: 179 ISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGV 238
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
NG+L MY + DA VF M RD +++TMI G+ K + E++V +F +
Sbjct: 239 NSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE 298
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV 527
KPD V AC L D+
Sbjct: 299 -NLDQFKPDILTVTSVLCACGHLRDL 323
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 217/374 (58%), Gaps = 10/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ S ++ AC AL K H + + L V + MY++ + ++ SVF
Sbjct: 438 DIAVVS-VLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVF 496
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +DL SW+ +I + +G GE+++++F + ++ G PD FIG+ + CS G V
Sbjct: 497 DGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVE 556
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG+ +F M +GI P ++HY ++DMLG G LD+AL + +MP +PD VW L++
Sbjct: 557 EGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSF 616
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRL-NEKSKAGLVPVN--------ASELAKEKENKKLA 639
CR G LE+G AE + +L+P + N S + L + ++ K+ +K A
Sbjct: 617 CRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDA 676
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +E+ KVH + AGD P++ ++ R L +M + GY P T VLHD+D+E K
Sbjct: 677 GCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKI 736
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
E L HSE+LA+ GLL++ +RI KNLR+C DCH+A K +S++ GRE+IIRD KRF
Sbjct: 737 EKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRF 796
Query: 760 HHFKDGLCSCRDYW 773
HHFKDGLCSC DYW
Sbjct: 797 HHFKDGLCSCGDYW 810
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++AC + + +H V ++ L V N ++ MY + +D A VF M
Sbjct: 33 TFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYM 92
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK--QAGLKPDDQIFIGVFSACSALGDVVE 529
R+L SW+++I+GF++NG +D D+ + + GL PD + V C+ DV
Sbjct: 93 PVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQM 152
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
G + ++ G+ ++ S+VDM GYL EA +K
Sbjct: 153 G-IRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDK 194
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI--LKMYSECDSMDDAFS 466
D T L+ A K+L K VH V R L + ++ GI L +Y C A
Sbjct: 336 DWFTIGSLLLASAHLKSLRYGKEVHGFVLR--HGLEIDSFIGISLLSLYIHCGESSSARL 393
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M E+ SW+ MI+G+++NGL EDA+ +F + G +P D + V ACS
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ--- 450
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ L + Y + + V S +DM +G + E+ + + D+ W
Sbjct: 451 --QSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASW 507
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQL 608
++ +HG+ G+ E+ E++
Sbjct: 508 NAIIAAYGVHGD---GEESIELFERM 530
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ GL +G + EA + ++ Q I V+ T ++ AC + L K +H + R
Sbjct: 206 MIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRH 265
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
NG + Y++C + A VF +M + + SW+ +I G A+NG A++++
Sbjct: 266 GFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY 325
Query: 500 SQFKQAGLKPD 510
Q +GL PD
Sbjct: 326 IQMTYSGLVPD 336
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ T ++ C ++ +H +L V N ++ MYS+C + +A +F
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLF 192
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSAC 521
++ SW+TMI G G +A ++F + + Q ++ ++ + + AC
Sbjct: 193 DKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 228/401 (56%), Gaps = 13/401 (3%)
Query: 385 LVKEGKVKEAIEVLGLL--EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
VK + +EA + + EK+ + +D + ++ AC ALE+ +H++VE+
Sbjct: 208 FVKGNRFREAFALFRRMRVEKK-MELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIV 266
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L I+ MY +C +D AF VF + + ++SW+ MI GFA +G GEDA+ +F +
Sbjct: 267 LDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEM 326
Query: 503 KQ-AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ A + PD F+ V +AC+ G V EG +F M +GI P+ +HY +VD+L G
Sbjct: 327 EEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAG 386
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA + I++MPM PD V L+ CR+HGNLELG+ V +LDP G
Sbjct: 387 RLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGN 446
Query: 622 V---------PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +L ++ KK +++E+ V+E+ AG HP + IYA I
Sbjct: 447 MYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYE 506
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++ G++P+T VLHD+ +E +E L HSE+LA+++GLL + +R+ KNLRV
Sbjct: 507 MLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRV 566
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH A K+ISK+ ++IIRD RFHHF +G CSC+DYW
Sbjct: 567 CKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 403 KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
+ C++ + TF L++AC K EEAK +H HV + N ++ +Y S+D
Sbjct: 96 QHCVTPNAFTFPSLIRAC---KLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLD 152
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF----------------------S 500
DA VF M++ ++ SW ++++G+++ GL ++A +F +
Sbjct: 153 DARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGN 212
Query: 501 QFKQA-----------GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
+F++A ++ D + + SAC+ +G + +GM + + K GIV K
Sbjct: 213 RFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKT-GIVLDSKL 271
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+I+DM G LD+A + ++ V W ++ MHG
Sbjct: 272 ATTIIDMYCKCGCLDKAFHVFCGLKVK-RVSSWNCMIGGFAMHGK 315
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 226/400 (56%), Gaps = 15/400 (3%)
Query: 387 KEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
K GK EA+ + E + S + T ++QAC ALE+ + +H ++ R
Sbjct: 260 KNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSI 319
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY C +D VF M +RD+ SW+++I+ + +G G A+ IF +
Sbjct: 320 LPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLA 379
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G P F+ V ACS G V EG FESM +D+GI P ++HY +VD+LG LD
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLD 439
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + ++ M EP VW L+ CR+HGN+EL +R + + L+P N + L +
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK--NAGNYVLLADI 497
Query: 625 NA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A +L + + +KL + +EVR K++ + + D +P ++I+A + L
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKL 557
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
MKE GYIP+T+ VL++++ E KE +L HSE+LA++ GL+++ PIRI KNLR+C
Sbjct: 558 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH K ISK + +E+++RD RFH FK+G+CSC DYW
Sbjct: 618 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 396 EVLGLLEKQ---CISVDLPTFSQLMQAC----GDAKALEEAKAVHEHVERLLSPLRVSTY 448
EVLGL K + D T++ +++AC A L + K +H H+ R V
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIM 220
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAG 506
++ MY+ +D A VF+ M R++ SW MI +AKNG +A+ F + +
Sbjct: 221 TTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLD 564
P+ + V AC++L + +G ++H + + I+P + ++V M G G LD
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVIS---ALVTMYGRCGKLD 337
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
++M + DV W L++ +HG G + +I E++
Sbjct: 338 VGQRVFDRM-HDRDVVSWNSLISSYGVHG---YGRKAIQIFEEM 377
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L KEGK+K+A+ VL Q S T+ L+ CG +L + VH H+ S
Sbjct: 53 IQSLCKEGKLKQALRVLS----QESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGS 108
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ MYS+ S+D A VF +R + W+ + G GE+ + ++ +
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGM-----LHFESMSKDYGIVPSMKHYVSIVDM 556
+ G++ D + V AC A + + +H + Y + ++VDM
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYN--SHVYIMTTLVDM 226
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D A MP+ +V W ++
Sbjct: 227 YARFGCVDYASYVFNGMPVR-NVVSWSAMI 255
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 226/390 (57%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + +E CI + T + L + AL +H E+ V N ++
Sbjct: 1 EALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALI 60
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY + + A SVFSNMT ++ +W+ +ITG + +GLG++A+ +F G +P+
Sbjct: 61 IMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYV 120
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
FIGV AC+ L V EG +F + K + IVP ++HY IV +L +G LDEA F+
Sbjct: 121 TFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRS 180
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVP 623
+ DV W L+N C +H + + G + AE + QL+P S ++ + +
Sbjct: 181 HQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHV 240
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
V +L +E+ KK + LE+R+ H + + D HPE + IY ++ L ++++ GY+
Sbjct: 241 VEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYV 300
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+ VLHDI+ E K + L HSE+LAV++GL+ +P+ APIR++KNLR+C DCH+A+K+I
Sbjct: 301 PDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLI 360
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SK+ R +++RDA RFHHF++G CSC DYW
Sbjct: 361 SKVANRVIVVRDANRFHHFQNGYCSCGDYW 390
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 223/377 (59%), Gaps = 16/377 (4%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFS 466
D ++S ++ +C + AL + +H + R + LRV++ ++ MY++C S+ DAF
Sbjct: 184 DEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVAS--SLITMYAKCGSLVDAFQ 241
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F +R++ W +I ++G V++F Q + G+KPD F+ V SACS G
Sbjct: 242 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 301
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V EG +F SM K +GI P +HY IVD+L G LD A FIE MP++PD VW L+
Sbjct: 302 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 361
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVPVNASELAKEKEN---K 636
+ CR H NL +G A + L+P N ++ G++ A E+ ++ E+ +
Sbjct: 362 SACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLN-EADEVRRKMESIGVR 420
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +++++ + + D SH +T +IY ++ L+ +K+ GY+ ET F + + +E
Sbjct: 421 KEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEE 479
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE++L HSE++A++ GLLS PA APIRI KNLR CGDCH+ +K S+I RE+I+RD
Sbjct: 480 YKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDI 539
Query: 757 KRFHHFKDGLCSCRDYW 773
RFHHF +G+CSC DYW
Sbjct: 540 NRFHHFTNGICSCGDYW 556
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 8/226 (3%)
Query: 383 DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
D L+ E KV E E+ LL + ++D +FS + AC +A LE K VH +L
Sbjct: 60 DMLMAE-KVFE--EMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVW 116
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
V N + MY +C +D +FSN RD+ +W+ MI + N EDA + F
Sbjct: 117 NLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMM 176
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++ G PD+ + V +C+ L + +G L + + G V +++ S++ M G
Sbjct: 177 RRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS-GFVKNLRVASSLITMYAKCGS 235
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
L +A + E+ + +V W ++ C+ HG+ + E+ EQ+
Sbjct: 236 LVDAFQIFEETE-DRNVVCWTAIIAACQQHGH---ANWVVELFEQM 277
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 224/378 (59%), Gaps = 13/378 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEH---VERLLSPLRVSTYNGILKMYSECDSMDDAF 465
D T L+ AC LE K +H + +++ + ++ MY++C S+D A
Sbjct: 212 DEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLAL 271
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M R++ +W+ +I G A +G GEDA+ +F Q + L PDD FI + ACS G
Sbjct: 272 QVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAG 331
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V EG+ F++M + I P M+HY +VD+L +D+AL FIE MP++ + +W L
Sbjct: 332 LVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATL 391
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK-----AGLVPVN-ASELAKEKENK--- 636
+ CR G+ +L ++ V +L+P AG+ + A +L K+ +NK
Sbjct: 392 LGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIE 451
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQ 695
K + +E+ +H++ AGD SH +T++IYA+I + ++ + G++P T VL DI++
Sbjct: 452 KTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEE 511
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE +L HSE+LA++ GL+S+P+ +PIRI+KNLRVC DCHS LK+ SK+ RE++ RD
Sbjct: 512 EEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARD 571
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHFK+G CSC D+W
Sbjct: 572 RSRFHHFKEGSCSCMDFW 589
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + + ++ + VD T+ ++ AC A++ + H V + + N ++
Sbjct: 94 EAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALI 153
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF-KQAGLKPDD 511
+ Y C S A VF T RD+ +W+ MI GL E A D+ + K L+PD+
Sbjct: 154 QFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDE 213
Query: 512 QIFIGVFSACSALGDVVEG-MLHFESMSKD-YGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ + AC+ LG++ G LH S D + I + ++VDM G +D AL+
Sbjct: 214 VTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQV 273
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
+M + +V W L+ MHG+ G+ + +Q++ +L
Sbjct: 274 FRRMRVR-NVFTWNALIGGLAMHGH---GEDAISLFDQMEHDKL 313
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 16/225 (7%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
ISVD L C ++A A+ L +PL S L + S ++ A
Sbjct: 12 ISVDF-----LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLAL-SHSGDLNYAR 65
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F+ M D +TMI G+A++ +AV ++ + G+ D+ + V +AC+ LG
Sbjct: 66 KLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG 125
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
V G H E + +G + +++ + G A + ++ + DV W
Sbjct: 126 AVKLGRRFHCEVLKNGFG--SDLFVINALIQFYHNCGSFGCACDVFDESTVR-DVVTWNI 182
Query: 585 LMNLCRMHGNLELGDRCAEIVEQ---LDPSRLNEKSKAGLVPVNA 626
++N H N L ++ +++++ LD R +E + LVP A
Sbjct: 183 MIN---AHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACA 224
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 226/404 (55%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G + AI + + + + T + ++ AC AL K+VH+ ++
Sbjct: 377 MISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKN 436
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L + VST ++ MY++C ++ +A +F +E++ +W+TMI G+ +G G++A+ +
Sbjct: 437 LEQNIYVST--ALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKL 494
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F++ G +P F+ V ACS G V EG F +M Y I P +HY +VD+LG
Sbjct: 495 FNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILG 554
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G L++ALEFI KMP+EP VW L+ C +H + L +E + +LDP +
Sbjct: 555 RAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVL 614
Query: 614 --NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N S P AS E K++ K L+EV H + GD SH +T IYA
Sbjct: 615 LSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAK 674
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L +M+E GY ET LHD+++E KE HSE+LA++ GL+++ IRI+KN
Sbjct: 675 LEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKN 734
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH+A K ISKI R +++RDA RFHHFKDG+CSC DYW
Sbjct: 735 LRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L+ S + +YS + +D A +F +E+ + +W+ MI+G+A++GL E A+ +F +
Sbjct: 338 LQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEM 397
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
P+ + SAC+ LG + G + K + ++ +++DM G
Sbjct: 398 MTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQNIYVSTALIDMYAKCGN 456
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ EA + + + E + W ++ +HG
Sbjct: 457 ISEASQLFD-LTSEKNTVTWNTMIFGYGLHG 486
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ ++++V + Q + +D T + ++ A + + ++ + +L
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
G++ ++S+C+ +D A +F + + DL S++ +I+GF+ NG E AV F
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFR 294
Query: 501 QFKQAGLKPDDQIFIGVFSACSALG 525
+ +G + +G+ S G
Sbjct: 295 ELLVSGQRVSSSTMVGLIPVSSPFG 319
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 9/181 (4%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ +Y + + A VF M +RD W+TMITG +N +D+V +F G++
Sbjct: 142 SALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
D V A + + +V GM + ++ G ++ + +D A
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGM-GIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTA-R 259
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA-EIVEQLDPS--RLNEKSKAGLVPVN 625
+ M +PD+ + L++ +G E CA + +L S R++ + GL+PV+
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETE----CAVKYFRELLVSGQRVSSSTMVGLIPVS 315
Query: 626 A 626
+
Sbjct: 316 S 316
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 215/372 (57%), Gaps = 11/372 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++ AC LE +++H H + + + ++ MY +C ++D+ F M
Sbjct: 263 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEG 530
E++L + +++I G+A G + A+ +F + + G P+ F+ + SACS G V G
Sbjct: 323 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 382
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
M F+SM YGI P +HY IVDMLG G ++ A EFI+KMP++P + VW L N CR
Sbjct: 383 MKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACR 442
Query: 591 MHGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVNASELAKEKEN---KKLASQ 641
MHG +LG AE + +LDP L+ A A+ + +E + KK A
Sbjct: 443 MHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGY 502
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ + V+++VH ++A D SH +I + LR +M+ AGY P+ + L+D+++E K
Sbjct: 503 SWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAE 562
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
+ HSE+LA++ GLLS P PIRI KNLR+CGDCHS K +S V RE+I+RD RFH
Sbjct: 563 VSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 622
Query: 762 FKDGLCSCRDYW 773
FKDG+CSC+DYW
Sbjct: 623 FKDGICSCKDYW 634
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V +G+ +EAIE + + TF + AC D L +H V R V
Sbjct: 135 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 194
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S NG++ Y +C + + +F+ M ++ SW +++ + +N E A ++ + ++
Sbjct: 195 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 254
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++ D + V SAC+ + + G +H ++ + ++ ++VDM G G ++
Sbjct: 255 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA--CVERTIFVGSALVDMYGKCGCIE 312
Query: 565 EALEFIEKMP 574
++ + ++MP
Sbjct: 313 DSEQAFDEMP 322
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+ D + A V R++ SW ++I+G A+NG A+ F + ++ G+ P+D
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F F A ++L V G +++ G + + S DM T D+A + +++
Sbjct: 61 FPCAFKAVASLRLPVTGK-QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 574 PMEPDVDVWEKLMN 587
P E +++ W ++
Sbjct: 120 P-ERNLETWNAFIS 132
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 59/141 (41%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G A+ + ++ + + TF +A + K +H +
Sbjct: 30 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 89
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V MY + DDA +F + ER+L +W+ I+ +G +A++ F +
Sbjct: 90 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 149
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
F++ P+ F +ACS
Sbjct: 150 FRRIDGHPNSITFCAFLNACS 170
>gi|115487662|ref|NP_001066318.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|77553160|gb|ABA95956.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648825|dbj|BAF29337.1| Os12g0181900 [Oryza sativa Japonica Group]
gi|125578708|gb|EAZ19854.1| hypothetical protein OsJ_35439 [Oryza sativa Japonica Group]
Length = 584
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 239/409 (58%), Gaps = 21/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G + AIEV ++ + D TF + AC A AL+ + V R++
Sbjct: 181 MISGYEQNGLAERAIEVYREMQVAQVVPDSATFVATLSACAQAGALDLGREVER---RIV 237
Query: 441 SP-LRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
S + VS + G ++ MY+ C + A F + ER++ +W +MI G+ +G G +A+
Sbjct: 238 SDQMDVSVFLGSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGREAIK 297
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F ++ G P+D F+ V +AC+ G V EG F+SM + YG+VP +HY S+VDM
Sbjct: 298 LFHLMRREGPTPNDVTFVAVLAACAHAGLVNEGRNAFDSMKRVYGLVPRAEHYCSMVDMY 357
Query: 558 GSTGYLDEALEFI-EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G G LD+A++FI + +P EP +VW ++ C+MH N LG AE + L+P N
Sbjct: 358 GRAGLLDDAMQFICDSIPEEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPE--NPS 415
Query: 617 SKAGLVPVNA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L + A + ++ KK +L+E+ H +R G+ SH +T +
Sbjct: 416 HRVLLSNIYALSGKMNHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTRE 475
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL-LSSPARAPI 724
IY + L ++ +AGY+PET VLH++++E +E AL HSE+LAV++GL +SS + API
Sbjct: 476 IYRYLEELIHRISDAGYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTAPI 535
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++KNLR+CGDCH A+K +S + RE+I+RD RFHHFKDG CSC +YW
Sbjct: 536 RVIKNLRICGDCHLAIKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
D AL AVH H L ++ +YS+C + A +F + +R + +W+
Sbjct: 121 DLSALRTGMAVHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNA 180
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +NGL E A++++ + + A + PD F+ SAC+ G + G + D
Sbjct: 181 MISGYEQNGLAERAIEVYREMQVAQVVPDSATFVATLSACAQAGALDLGREVERRIVSDQ 240
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
V S+ ++V+M G + +A ++ +++ E +V W ++ MHG+
Sbjct: 241 MDV-SVFLGSALVNMYARCGLVSKARDWFDRL-QERNVVTWTSMIAGYGMHGH 291
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 229/388 (59%), Gaps = 13/388 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G G+ EA+ + + + + D T L+ AC + AL + H ++ ++
Sbjct: 68 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 127
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L +Y++C S+ A VF M E+ + SW ++I G A NG G++A+++F +
Sbjct: 128 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 187
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++ GL P + F+GV ACS G V EG +F+ M ++YGIVP ++HY +VD+LG G
Sbjct: 188 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 247
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--------- 612
+ +A EFI+ MPM+P+ VW L+ C +HG+L LG+ + QL+P
Sbjct: 248 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSN 307
Query: 613 --LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
+E+ + + V + L + KK +L+E+R+++HE+ GD SHP+T++IY +
Sbjct: 308 LYASEQRWSDVHKVRRTML--REGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKL 365
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +K GY+P VL DI++E KE AL HSE++A++ L+++ A PIR++KNL
Sbjct: 366 AEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNL 425
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKR 758
RVC DCH A+K+ISK+ RE+++RD R
Sbjct: 426 RVCADCHLAIKLISKVFDREIVVRDRSR 453
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ MY+ C + A +F M ER+L +W+++I G+A NG +A+ +F +
Sbjct: 30 VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL 89
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G++PD + + SAC+ LG + G M K G+ ++ +++D+ G +
Sbjct: 90 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK-VGLDGNLHAGNALLDLYAKCGSIR 148
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
+A + ++M E V W L+ ++G G E+ ++L+ + GL+P
Sbjct: 149 QAHKVFDEME-EKSVVSWTSLIVGLAVNG---FGKEALELFKELE--------RKGLMP 195
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 222/371 (59%), Gaps = 17/371 (4%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ AC AL+ + H + R + + V ++ MY +C ++ S+F M +++
Sbjct: 193 VLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKN 252
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
S+ MITG A +G G +A+ +FS + GLKPDD +++GV SAC+ G V EG+ F
Sbjct: 253 QLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFN 312
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M ++GI P+++HY IV ++G G L++ALE I MP++P+ VW L++ C+ H NL
Sbjct: 313 RMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNL 372
Query: 596 ELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKEN-KKLASQ------------N 642
E+G+ A+ + +L+ S + +V N AK E+ K+ ++ +
Sbjct: 373 EIGEIAAKSLGELNSSNPGDY----VVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFS 428
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
L++V K++++ + D SHP+ +Y +I + Q+K GY P+T VL D+D+E K + L
Sbjct: 429 LVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRL 488
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
AHS++LA++ L+ + APIRI +NLR+C DCH+ K+IS I RE+ +RD RFHHF
Sbjct: 489 KAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHF 548
Query: 763 KDGLCSCRDYW 773
KDG CSCRDYW
Sbjct: 549 KDGTCSCRDYW 559
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 348 QNGMMASQVLNNCKHED----DFA-EASRSSQNNGTLE---QLDGLVKEGKVKEAIEVLG 399
+N AS ++ C D D+A R GT E + G V ++ A+ +
Sbjct: 15 ENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYY 74
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+ ++ + D T+ L +AC +++EE +H ++ + + N ++ MY +C
Sbjct: 75 EMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCG 134
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVF 518
++ + SVF +M RD+ SW +I A G+ + + +F + + G +P++ I + V
Sbjct: 135 KIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVL 194
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKM 573
SAC+ LG + G ++ ++ + M V S++DM G +++ L ++M
Sbjct: 195 SACTHLGALDLGRCTHVTLLRN---IREMNVIVQTSLIDMYVKCGCIEKGLSLFQRM 248
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 229/402 (56%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V+ G ++V + K + D+ TF + C A K +H + R
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY 540
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +++MYS+C ++++ VF M+ RD+ +W MI + G GE A++ F+
Sbjct: 541 ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++G+ PD +FI + ACS G V EG+ FE M Y I P ++HY +VD+L +
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-----SRLNEK 616
+ +A EFI+ MP++PD +W ++ CR G++E +R + + +L+P S L
Sbjct: 661 KISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 720
Query: 617 SKAGLVPVNASELAKEKENKKLASQN----LLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A L + L ++ K ++N +EV VH + +GD S P+++ IY +
Sbjct: 721 AYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEI 780
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLA-HSERLAVSHGLLSSPARAPIRIMKNLR 731
L + M + GYIP+ R V ++++E ++ L+ HSERLA++ GLL++ P+++MKNLR
Sbjct: 781 LYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLR 840
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH K+ISKIVGRE+++RDA RFH FKDG CSC+D W
Sbjct: 841 VCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 9/226 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL T S +++ACG + L AK ++ ++ + L + N ++ +Y++C M A VF
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
++M +D SW+++I+G+ ++G +A+ +F + D ++ + S + L D+
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G LH + GI + +++DM G + ++L+ M D W +++
Sbjct: 426 FGKGLHSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVIS 482
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV--PVNASELAK 631
C G+ G ++ Q+ S + LV P+ AS AK
Sbjct: 483 ACVRFGDFATG---LQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
K G EA+E G L + +S D TF +++AC E V+E + + +
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MYS + A VF M RDL SW+++I+G++ +G E+A++I+ + K +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 507 LKPDDQIFIGVFSACSALGDVVEG 530
+ PD V A L V +G
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G + EA+++ ++ D T+ L+ L+ K +H + +
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +S N ++ MY++C + D+ +FS+M D +W+T+I+ + G + + +Q
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+++ + PD F+ C++L G +G ++ ++++M G
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGK-EIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+ + E+M DV W ++ M+G G++ E ++ K+G+
Sbjct: 559 CLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADME--------KSGI 606
Query: 622 VP 623
VP
Sbjct: 607 VP 608
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 464 AFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
+ SVF ++ +++ W+++I F+KNGL +A++ + + +++ + PD F V AC+
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
L D G L +E + D G + ++VDM G L A + ++MP+ D+ W
Sbjct: 118 GLFDAEMGDLVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSW 175
Query: 583 EKLMNLCRMHGNLE 596
L++ HG E
Sbjct: 176 NSLISGYSSHGYYE 189
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EA+E+ L+ I D T S ++ A G+ +++ + +H +
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V NG++ MY + DA VF M RD S++TMI G+ K + E++V +F +
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV 527
KPD V AC L D+
Sbjct: 299 -NLDQFKPDLLTVSSVLRACGHLRDL 323
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 218/371 (58%), Gaps = 9/371 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ +C A++ K +H ++ + + + S ++ +Y++C ++ A VF M
Sbjct: 364 TFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGM 423
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ L SW+ MI G A +G + A ++FS+ G++P++ F+G+ SAC G V G
Sbjct: 424 KIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQ 483
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F SM +DY I P +HY ++D+LG G +EA ++ M ++PD +W L+ CR
Sbjct: 484 QFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRD 543
Query: 592 HGNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVNASELAKEKEN----KKLASQN 642
HG +ELG+ AE + +L+P L AG + + + N KK+
Sbjct: 544 HGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCT 603
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV + VHE+ GD HP+++ IY ++ + Q+K G++ +T VL+D+D+E KE AL
Sbjct: 604 TIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGAL 663
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA++ GL+S+ PIRI+KNLRVC +CHSA K+ISKI RE+I RD RFHHF
Sbjct: 664 SHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHF 723
Query: 763 KDGLCSCRDYW 773
KDG CSC DYW
Sbjct: 724 KDGSCSCNDYW 734
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 144/345 (41%), Gaps = 51/345 (14%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQ--DQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQ 348
H L + + IH + + Y Q + N Q +DQS N S++ I
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQS--------NFRDAISFTALIA 203
Query: 349 NGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISV 408
+ + + D+ S N + G + G+ KEA+ + + K +
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWN----AMIAGYAQMGRSKEALLLFEDMRKANVPP 259
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ T ++ AC + AL+ ++ +E L S L++ N ++ MYS+C + A
Sbjct: 260 NESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKL--VNALIDMYSKCGDLQTARE 317
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F +M ERD+ SW+ MI G+ ++A+ +F + +G++P + F+ + +C+ LG
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGA 377
Query: 527 VVEGMLHFESMSKDYGI------------------------------VPSMKHYVSIVDM 556
+ G ++K++ + S+ + +++
Sbjct: 378 IDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICG 437
Query: 557 LGSTGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELG 598
L G D+A E KM +EP+ + +++ C+ G ++LG
Sbjct: 438 LAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLG 482
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD--------- 462
TF L+++C + E K +H HV +L V + ++ MY++ M+
Sbjct: 131 TFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQS 190
Query: 463 ---DAFS-------------------VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
DA S +F M +D+ SW+ MI G+A+ G ++A+ +F
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFE 250
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++A + P++ + V SAC A + ++ S +D G+ ++K +++DM
Sbjct: 251 DMRKANVPPNESTIVSVLSAC-AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC 309
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L A E + M +E DV W ++
Sbjct: 310 GDLQTARELFDDM-LERDVISWNVMI 334
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 415 QLMQACGDAKALEEAKAVHEHVER------LLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
+L+ C +++ K +H H+ + L + ++ ++ + S + A S+F
Sbjct: 34 KLLSKC---QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAV----SRSGDISYAISLF 86
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+++ E +L W++MI G + + A+ F + +G++P+ F + +C+ L
Sbjct: 87 NSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAH 146
Query: 529 EG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
EG +H + G V + + S+++M +G ++ A
Sbjct: 147 EGKQIHAHVLK--LGFVSDVFIHTSLINMYAQSGEMNNA 183
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 215/364 (59%), Gaps = 9/364 (2%)
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
AC AL K +H + + + I+ MY++ + + +F + E+D+ S
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W+ +I G+ +G G++A+++F + + GLKPDD F G+ ACS G V +G+ +F M
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
+ I P ++HY +VDMLG G +D+AL IE+MP +PD +W L++ CR+HGNL LG
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599
Query: 599 DRCAEIVEQLDPSR-----LNEKSKAGLVPVNASELAKEKEN----KKLASQNLLEVRSK 649
++ A + +L+P + L AG + + + +K A + +EV K
Sbjct: 600 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 659
Query: 650 VHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERL 709
VH + GD PE +++ R L ++ GY P+T VLHD+++E K L HSE+L
Sbjct: 660 VHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKL 719
Query: 710 AVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
A+S GLL++ P+R+ KNLR+CGDCH+A K ISK+V R++++RD KRFHHF+DG+CSC
Sbjct: 720 AISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSC 779
Query: 770 RDYW 773
DYW
Sbjct: 780 GDYW 783
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ----LMQACG 421
FA +S + Q + +L ++ L + G +KEA++ L E + +D S+ L+QACG
Sbjct: 59 FANSSTNRQFS-SLHEIKKLCESGNLKEALDFLQR-ESDDVVLDSAQRSEAMGVLLQACG 116
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNG-ILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
K +E + +HE V N I+ MYS C S D+ VF + ++L W+
Sbjct: 117 QRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWN 176
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+++ + +N L EDA+ IFS+ KPD+ V AC+ L D+ G + M+
Sbjct: 177 AIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI-IHGMAT 235
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+V + +++ M G G ++EA++ + + V W L+
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI--LKMYSECDSMDDAFS 466
D T L+ AC K+L + +H R + L V + GI L +Y C A
Sbjct: 309 DWFTIGSLLLACSRMKSLHYGEEIHGFALR--NGLAVDPFIGISLLSLYICCGKPFAAQV 366
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M R L SW+ MI G+++NGL ++A+++F Q G++P + + V ACS L
Sbjct: 367 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 426
Query: 527 VVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G LH ++ + + SI+DM G + + +++ E DV W +
Sbjct: 427 LRLGKELHCFALKAH--LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVI 483
Query: 586 MNLCRMHGNLELGDRCAEIVEQL 608
+ +HG G E+ E++
Sbjct: 484 IAGYGIHGR---GKEALELFEKM 503
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS-VFSN 470
T +++AC L + +H ++ V N ++ MY +C +++A VF
Sbjct: 210 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
M + ++SW+ ++ G+A+N A+D++ Q +GL PD + ACS +
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 233/392 (59%), Gaps = 13/392 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +A++++ + + +D ++ ++ A LE VH R
Sbjct: 310 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 369
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C +D A F+ M R+ SW++MI+G+A++G GE+A+ +F+
Sbjct: 370 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFA 429
Query: 501 QFKQAGLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K G P D + F+GV SACS G + EG HFESMS YG+ P ++H+ + D+LG
Sbjct: 430 NMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGR 489
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-NLELGDRCAEIVEQLDPSRLNEKS 617
G LD+ +FI+KMP++P+V +W ++ CR +G ELG + AE++ QL+P
Sbjct: 490 AGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 549
Query: 618 KAGLV---------PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
G + V A + K+ + KK A + + ++ VH + AGD SHP+TD IY
Sbjct: 550 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYK 609
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS-PARAPIRIM 727
++ L +M++AGY+P+T F L+D++QE KEE L HSE+LAV+ L + + PIRIM
Sbjct: 610 KLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 669
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
KNLRVCGDCHSA K ISKI GR++I+RD+ R+
Sbjct: 670 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 426 LEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
L++ + VH HV L V NG++ MY++C S+ DA VF M E+D SW++MIT
Sbjct: 49 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGI 543
G +NG +AV+ + ++ + P I S+C++L G +H ES+ GI
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LGI 166
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ +++ + TGYL+E + MP E D W ++
Sbjct: 167 DLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSII 208
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+T N ++ Y +C MD +FS M+ER D +W++MI+G+ N L A+D+ Q
Sbjct: 273 TTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQ 332
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G + D ++ V SA +++ + GM + S + + ++VDM G LD
Sbjct: 333 TGQRLDSFMYATVLSAFASVATLERGM-EVHACSVRACLESDVVVGSALVDMYSKCGRLD 391
Query: 565 EALEFIEKMPM 575
AL F MP+
Sbjct: 392 YALRFFNTMPV 402
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G EA+E + + I T + +C K + + +H +L
Sbjct: 106 MITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 165
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG-EDAVDIF 499
L VS N ++ +Y+E +++ +FS+M E D SW+++I A + +AV F
Sbjct: 166 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACF 225
Query: 500 SQFKQAGLKPDDQIF 514
+AG K + F
Sbjct: 226 LNALRAGQKLNRITF 240
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 228/375 (60%), Gaps = 15/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTY-NGILKMYSECDSMDDAFSVFS 469
T ++ AC A+E + +H ++ +RL S++ ++ MY++C ++ A VF
Sbjct: 338 TMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 397
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
++ R L+SW+ MI GFA +G A DIFS+ ++ ++PDD F+G+ SACS G +
Sbjct: 398 SILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDL 457
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G F SM +DY I P ++HY ++D+LG +G EA E I M MEPD +W L+ C
Sbjct: 458 GRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKAC 517
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAK------EKENKKL 638
+M+ N+ELG+ A+ + +++P N S L + A+ E+AK +K KK+
Sbjct: 518 KMYANVELGESYAQNLIKIEPK--NPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKV 575
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL ++++E K
Sbjct: 576 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWK 635
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I RD R
Sbjct: 636 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 695
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+DG+CSC DYW
Sbjct: 696 FHHFRDGVCSCNDYW 710
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 136/304 (44%), Gaps = 12/304 (3%)
Query: 291 HQQALSGHYSGNFGIHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNG 350
H L Y + +H + S Y Q NG + + +R+ + Q+ + SY+ I
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQ--NG---RLEDARKVFDQSSHR-DVVSYTALITGY 179
Query: 351 MMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDL 410
+ + K D+ S N + G + G KEA+E+ + K + D
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWN----AMISGYAETGNNKEALELFKEMMKTNVRPDE 235
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T ++ AC + ++E + VH ++ + N ++ +Y +C ++ A +F
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ +D+ SW+T+I G+ L ++A+ +F + ++G P+D + + AC+ LG + G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 355
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + G+ + H S++DM G ++ A + + + + + W ++
Sbjct: 356 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGF 414
Query: 590 RMHG 593
MHG
Sbjct: 415 AMHG 418
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L+++C +KA E + +H HV +L L + + ++ MY + ++DA VF
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164
Query: 472 TERDLTSWDTMITGFAKNGL-------------------------------GEDAVDIFS 500
+ RD+ S+ +ITG+A G ++A+++F
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ + V SAC+ + G S D+G ++K +++D+
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGR-QVHSWIDDHGFGSNLKIVNALIDLYIKC 283
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 284 GEVETACGLFEGLSYK-DVISWNTLI 308
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 215/364 (59%), Gaps = 9/364 (2%)
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
AC AL K +H + + + I+ MY++ + + +F + E+D+ S
Sbjct: 518 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 577
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W+ +I G+ +G G++A+++F + + GLKPDD F G+ ACS G V +G+ +F M
Sbjct: 578 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 637
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
+ I P ++HY +VDMLG G +D+AL IE+MP +PD +W L++ CR+HGNL LG
Sbjct: 638 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 697
Query: 599 DRCAEIVEQLDPSR-----LNEKSKAGLVPVNASELAKEKEN----KKLASQNLLEVRSK 649
++ A + +L+P + L AG + + + +K A + +EV K
Sbjct: 698 EKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 757
Query: 650 VHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERL 709
VH + GD PE +++ R L ++ GY P+T VLHD+++E K L HSE+L
Sbjct: 758 VHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKL 817
Query: 710 AVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
A+S GLL++ P+R+ KNLR+CGDCH+A K ISK+V R++++RD KRFHHF+DG+CSC
Sbjct: 818 AISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSC 877
Query: 770 RDYW 773
DYW
Sbjct: 878 GDYW 881
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG-ILKMYSECDSMDDAFSVFSNMTER 474
L+QACG K +E + +HE V N I+ MYS C S D+ VF + +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL-KPDDQIFIGVFSACSALGDVVEGMLH 533
+L W+ +++ + +N L EDA+ IFS+ KPD+ V AC+ L D+ G +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI- 122
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M+ +V + +++ M G G ++EA++ E MP E ++ W ++
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSII 174
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI--LKMYSECDSMDDAFS 466
D T L+ AC K+L + +H R + L V + GI L +Y C A
Sbjct: 407 DWFTIGSLLLACSRMKSLHYGEEIHGFALR--NGLAVDPFIGISLLSLYICCGKPFAAQV 464
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M R L SW+ MI G+++NGL ++A+++F Q G++P + + V ACS L
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 524
Query: 527 VVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G LH ++ + + SI+DM G + + +++ E DV W +
Sbjct: 525 LRLGKELHCFALKAH--LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVI 581
Query: 586 MNLCRMHGNLELGDRCAEIVEQL 608
+ +HG G E+ E++
Sbjct: 582 IAGYGIHGR---GKEALELFEKM 601
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC L + +H ++ V N ++ MY +C +++A VF +M
Sbjct: 103 TLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFK--QAGLKPDDQIFIGVFSACSALGDVVE 529
ER+L SW+++I GF++NG +++ + F + + PD + V C+ D+ +
Sbjct: 163 PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEK 222
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
GM ++ G+ + S++DM +L EA +K
Sbjct: 223 GM-AVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDK 264
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ T ++ C + +E+ AVH +L + N ++ MYS+C + +A +F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIF-----SQFKQAGLKPDDQIFIGVFSAC 521
++++ SW++MI G+A+ ED F Q + A +K D+ + V C
Sbjct: 263 DKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ C + L+ K +H + R N + Y+ C ++ + VF M
Sbjct: 309 TILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ ++SW+ ++ G+A+N A+D++ Q +GL PD + ACS +
Sbjct: 369 DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 421
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 232/403 (57%), Gaps = 22/403 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL---RV 445
G EAI + ++ + T ++ +C L K +H + SP +
Sbjct: 315 GNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRS--SPSFSQSL 372
Query: 446 STYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-F 502
N ++ MY +C +++ A VF + R + +W MI +A+NG+GE+A+++F +
Sbjct: 373 MLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEML 432
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
G +P+ F+ V ACS LG + + HF SM D+G+ P+ HY +VD+LG G
Sbjct: 433 IDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGR 492
Query: 563 LDEALEFIEKMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L EA + + + E DV W ++ C+M+G+LE R A+ V +L+P N + L
Sbjct: 493 LGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPE--NVAGRVLL 550
Query: 622 VPVNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
V A+ ++A+ + KK A ++ +E+ ++VHE+ D SHP +IY+ +
Sbjct: 551 SNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSEL 610
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L ++KEAGY+P+T+ VL D+D+E K + L HSERLA++ G++S+P +R++KNL
Sbjct: 611 ERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNL 670
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K IS+IVGR++I+RD RFHHFKDG+CSC DYW
Sbjct: 671 RVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTY 448
+ A+E++ ++ + I + LPT+ L+ AC L A H+ + L
Sbjct: 214 RTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVA 273
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ +Y +C +DDA V M R SW MI +A+NG +A+++F G +
Sbjct: 274 GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE 333
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P D I V +C+ LG + G + S+ +++ M G G L+ A E
Sbjct: 334 PSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELARE 393
Query: 569 FIEKMPMEP-DVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
E +P+ V W ++ R + +G+ E+ +++
Sbjct: 394 VFECVPLRTRSVVTWTAMI---RAYAQNGVGEEAIELFQEM 431
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S + AC A+ L + ++E + + + ++ MY C +++A F
Sbjct: 135 TLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRS 194
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ W MI+ +A N A+++ + G+K ++ + AC++ D+ G
Sbjct: 195 PEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNG- 253
Query: 532 LHFESMSKDYGIVPSMKHYV-SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+ F + G+ S ++V++ G G +D+A ++ MP+ V W ++
Sbjct: 254 VAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAAYA 312
Query: 591 MHGN 594
+GN
Sbjct: 313 QNGN 316
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDA 464
+V + ++ L+ C + L+E + +H + L +T+ N ++ YS+ S+ A
Sbjct: 32 TVSINDYASLLWQC---RGLDEVRKLHAQIAA--RKLDRNTFLGNVLVDAYSKHGSLHGA 86
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS-- 522
F +T + SW+ ++ +A+NG A +F G++P+ AC+
Sbjct: 87 QLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAA 146
Query: 523 ---ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ALG + ++ E++ D + S+ + M G ++EA ++ P E DV
Sbjct: 147 RNLALGRKLNELIASEALEIDSHVESSL------ITMYGRCREIEEAERAFDRSP-EKDV 199
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
W +++ + + R E+V ++D
Sbjct: 200 VCWTAMIS---AYAHNWRTSRALELVRRMD 226
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 226/391 (57%), Gaps = 15/391 (3%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ ++ + + ++ D+ T ++ C A + K +H + +L V N +++M
Sbjct: 339 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 398
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+C S+ ++F VF M +D+ +W +I+ G G+ AV F + + AG+ PD F
Sbjct: 399 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 458
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ + ACS G V EG+ +F M KDY I P ++HY +VD+L + LD+A +FI MP
Sbjct: 459 VAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMP 518
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKE 634
++PD +W L++ CRM G+ E+ +R +E + +L+P ++ LV + L K +
Sbjct: 519 LKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP---DDTGYYVLVSNIYAALGKWDQ 575
Query: 635 ----NKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
K + ++ L +E+++KV+ + G + +++ L+ L M + GY
Sbjct: 576 VRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGY 635
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
I +FVLHDID++ K + L HSERLA++ GLL++ P+++MKNLRVC DCH+ K
Sbjct: 636 IANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKY 695
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKIV REL++RDA RFH FKDG CSC DYW
Sbjct: 696 ISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 16/224 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L G EA+ + ++ + D TF ++ AC E AK++H+ V +
Sbjct: 87 IRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGF 146
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY + +D A VF M RD+ SW+++I+G+ NG +A++I+ Q
Sbjct: 147 GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQ 206
Query: 502 FKQAGL------KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS--- 552
+ + KPD + AC LGD L F DY I + +
Sbjct: 207 SIKLFMEMVNQFKPDLLTITSILQACGHLGD-----LEFGKYVHDYMITSGYECDTTASN 261
Query: 553 -IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
+++M G L + E M + V W ++N+ +G +
Sbjct: 262 ILINMYAKCGNLLASQEVFSGMKCKDSVS-WNSMINVYIQNGKM 304
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 54/258 (20%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL T + ++QACG LE K VH+++ + N ++ MY++C ++ + VF
Sbjct: 221 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 280
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIF----------------------------- 499
S M +D SW++MI + +NG D++ +F
Sbjct: 281 SGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLR 340
Query: 500 --SQFKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVS 552
S+ + G+ PD + + CS L G + G + + D VP
Sbjct: 341 MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD---VPVGN---V 394
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR 612
+++M G L + + + M + DV W L++ C M+G + R
Sbjct: 395 LIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRA----------- 442
Query: 613 LNEKSKAGLVPVNASELA 630
E AG+VP + + +A
Sbjct: 443 FGEMEAAGIVPDHVAFVA 460
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS + +A A + +H + L V ++ Y+ +FSVF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 473 -ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ W+++I NGL +A+ ++S+ ++ L+PD F V +AC+ G+
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------GL 128
Query: 532 LHFESMSKDYGIVPSMKH----YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
L FE + V M Y+ +++DM LD+A + E+MP+ DV W L
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 187
Query: 586 MN 587
++
Sbjct: 188 IS 189
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 263/488 (53%), Gaps = 27/488 (5%)
Query: 304 GIHQNSPSFYQQDQNGGQYQW-DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKH 362
G+ S Q G+ + D+ RR ++ G + S + N ++ + CK
Sbjct: 215 GVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVS--VTNALITTYA--KCKR 270
Query: 363 EDDFAEA--------SRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
D A+ +R S N L G + ++A + ++ + + D T
Sbjct: 271 ADLAAQVFNELGNKKTRISWNAMIL----GFTQNECPEDAERLFARMQLENVRPDSFTLV 326
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
++ A D +A+ +H + R V ++ MYS+C + A +F + +R
Sbjct: 327 SVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR 386
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
+ +W+ MI G+ +G G+ AV++F + K G P++ F+ V +ACS G V EG +F
Sbjct: 387 HVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYF 446
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
SM KDYG+ P M+HY ++VD+LG G LDEA FI+ MP+EP + V+ ++ C++H N
Sbjct: 447 ASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKN 506
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS--------ELAKEKEN-KKLASQNLLE 645
+EL + A+I+ +L P + NAS A EK+ +K ++++
Sbjct: 507 VELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQ 566
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAH 705
++++VH + +G T+H IYA + L ++K+ GY+P+T + HD++ + K + L H
Sbjct: 567 LKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTH 625
Query: 706 SERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDG 765
SE+LA+++GL+ + I+I KNLRVC DCH+A K+IS + GRE+I+RD +RFHHFKDG
Sbjct: 626 SEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDG 685
Query: 766 LCSCRDYW 773
CSC DYW
Sbjct: 686 KCSCGDYW 693
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG G EA+ + + ++ + V + +QACG+ L+E + VHE + R+
Sbjct: 191 MIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIF 499
VS N ++ Y++C D A VF+ + ++ SW+ MI GF +N EDA +F
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLF 310
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
++ + ++PD + V A + + D ++
Sbjct: 311 ARMQLENVRPDSFTLVSVIPAVADISDPLQA 341
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T ++ AC DA+AL + VH R V+ +L Y +C +++ A +VF
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
M R+ SW+ MI G+A NG +A+ +F + Q G+ D + AC LG
Sbjct: 178 DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELG 234
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVE-RLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
L TF+ L++ C L +AVH +E R L+ +++ + MY +C DA VF
Sbjct: 16 LRTFTALLKLCAARADLATGRAVHAQLEARGLASESIAS-TALANMYFKCRRPADARRVF 74
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVD--IFSQFKQAGLKPDDQIFIGVFSACSALGD 526
M RD +W+ ++ G+A+NGL A++ + Q ++ G +PD + V AC A
Sbjct: 75 DRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPAC-ADAR 133
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ + + G+ + +++D G ++ A + MP+ V W ++
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVS-WNAMI 192
Query: 587 N 587
+
Sbjct: 193 D 193
>gi|226507132|ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 199/320 (62%), Gaps = 13/320 (4%)
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+VF M ER + SW ++I A G G++AV +F + K AG++PDD FIGV +ACS
Sbjct: 1 MAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHA 60
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V EG +FESM YGI P ++HY +VDM G G ++ A+EF+ KMPM+P+ +W
Sbjct: 61 GMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRT 120
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA--------SELAKEKEN- 635
L+ CR HG LELG+ + P+ +E + L V A SE+ +E
Sbjct: 121 LVAACRAHGRLELGETITRNLLNEYPA--HEANYVMLSNVYALTRRWKEKSEIRREMSKR 178
Query: 636 --KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
KK+ +L+E+ +VHE+ AGD SHP+ +IY ++ + +++ AG+I T VL D+
Sbjct: 179 GIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDL 238
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
D+E KE AL HSE+LA++ LL +P +R++KNLRVC DCH+A+K IS + RE+I+
Sbjct: 239 DEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNREIIV 298
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD RFH FK+G CSC D+W
Sbjct: 299 RDRSRFHRFKNGSCSCNDFW 318
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 226/391 (57%), Gaps = 15/391 (3%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ ++ + + ++ D+ T ++ C A + K +H + +L V N +++M
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 561
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+C S+ ++F VF M +D+ +W +I+ G G+ AV F + + AG+ PD F
Sbjct: 562 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 621
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ + ACS G V EG+ +F M KDY I P ++HY +VD+L + LD+A +FI MP
Sbjct: 622 VAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMP 681
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKE 634
++PD +W L++ CRM G+ E+ +R +E + +L+P ++ LV + L K +
Sbjct: 682 LKPDSSIWGALLSACRMSGDTEIAERVSERIIELNP---DDTGYYVLVSNIYAALGKWDQ 738
Query: 635 ----NKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
K + ++ L +E+++KV+ + G + +++ L+ L M + GY
Sbjct: 739 VRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGY 798
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
I +FVLHDID++ K + L HSERLA++ GLL++ P+++MKNLRVC DCH+ K
Sbjct: 799 IANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKY 858
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKIV REL++RDA RFH FKDG CSC DYW
Sbjct: 859 ISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 11/212 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G EA+E+ + D T S +++ACG ++EE +H +E++ V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
NG+L MY + + + D +F M RD SW+TMI G+++ GL E+++ +F + K
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FK 313
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS----IVDMLGSTGYLD 564
PD + AC LGD L F DY I + + +++M G L
Sbjct: 314 PDLLTITSILQACGHLGD-----LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 368
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ E M + V W ++N+ +G+ +
Sbjct: 369 ASQEVFSGMKCKDSVS-WNSMINVYIQNGSFD 399
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L G EA+ + ++ + D TF ++ AC E AK++H+ V +
Sbjct: 87 IRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGF 146
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY + +D A VF M RD+ SW+++I+G+ NG +A++I+ +
Sbjct: 147 GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYR 206
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F+ G+ PD V AC LG V EG
Sbjct: 207 FRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL T + ++QACG LE K VH+++ + N ++ MY++C ++ + VF
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
S M +D SW++MI + +NG ++A+ +F K +KPD ++ + S + LGD+
Sbjct: 375 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLH 433
Query: 529 EGM-LH--FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
G LH M + IV S ++VDM G + ++L+ E M D+ W +
Sbjct: 434 LGKELHCDLAKMGFNSNIVVSN----TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTI 488
Query: 586 MNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKSKAGLVPVNASELAKEKENKKL 638
+ C + LG R + E + P + + ++PV S LA +++ K++
Sbjct: 489 IASCVHSEDCNLGLRMISRMRTEGVTP---DMATMLSILPV-CSLLAAKRQGKEI 539
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
++ G EA+++ +++ + D T+ L+ L K +H + ++ +
Sbjct: 393 IQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNI 451
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY++C M D+ VF NM RD+ +W+T+I + + + S+ +
Sbjct: 452 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 511
Query: 506 GLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+ PD + + CS L G + G + + D VP +++M
Sbjct: 512 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD---VPVGN---VLIEMYSKC 565
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L + + + M + DV W L++ C M+G + R E AG
Sbjct: 566 GSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRA-----------FGEMEAAG 613
Query: 621 LVPVNASELA 630
+VP + + +A
Sbjct: 614 IVPDHVAFVA 623
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS + +A A + +H + L V ++ Y+ +FSVF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 473 -ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ W+++I NGL +A+ ++S+ ++ L+PD F V +AC+ G+
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------GL 128
Query: 532 LHFESMSKDYGIVPSMKH----YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
L FE + V M Y+ +++DM LD+A + E+MP+ DV W L
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 187
Query: 586 MN 587
++
Sbjct: 188 IS 189
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 215/372 (57%), Gaps = 11/372 (2%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S ++ AC LE +++H H + + + ++ MY +C ++D+ F M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVVEG 530
E++L + +++I G+A G + A+ +F + + G P+ F+ + SACS G V G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
M F+SM YGI P +HY IVDMLG G ++ A EFI+KMP++P + VW L N CR
Sbjct: 433 MKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACR 492
Query: 591 MHGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVNASELAKEKEN---KKLASQ 641
MHG +LG AE + +LDP L+ A A+ + +E + KK A
Sbjct: 493 MHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGY 552
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+ + V+++VH ++A D SH +I + LR +M+ AGY P+ + L+D+++E K
Sbjct: 553 SWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAE 612
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
+ HSE+LA++ GLLS P PIRI KNLR+CGDCHS K +S V RE+I+RD RFH
Sbjct: 613 VSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 672
Query: 762 FKDGLCSCRDYW 773
FKDG+CSC+DYW
Sbjct: 673 FKDGICSCKDYW 684
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 396 EVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL-SPLRVSTYNGILKM 454
+ LGLL K IS A ++ + VH + + L SP N ++ M
Sbjct: 7 DALGLLLKNAIS---------------ASSMRLGRVVHARIVKTLDSPPPPFLANYLINM 51
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+ D + A V R++ SW ++I+G A+NG A+ F + ++ G+ P+D F
Sbjct: 52 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
F A ++L V G +++ G + + S DM T D+A + +++P
Sbjct: 112 PCAFKAVASLRLPVTGK-QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 575 MEPDVDVWEKLMN 587
E +++ W ++
Sbjct: 171 -ERNLETWNAFIS 182
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V +G+ +EAIE + + TF + AC D L +H V R V
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S NG++ Y +C + + +F+ M ++ SW +++ + +N E A ++ + ++
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
++ D + V SAC+ + + G +H ++ + ++ ++VDM G G ++
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA--CVERTIFVGSALVDMYGKCGCIE 362
Query: 565 EALEFIEKMP 574
++ + ++MP
Sbjct: 363 DSEQAFDEMP 372
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 59/141 (41%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G A+ + ++ + + TF +A + K +H +
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V MY + DDA +F + ER+L +W+ I+ +G +A++ F +
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 502 FKQAGLKPDDQIFIGVFSACS 522
F++ P+ F +ACS
Sbjct: 200 FRRIDGHPNSITFCAFLNACS 220
>gi|302780141|ref|XP_002971845.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
gi|300160144|gb|EFJ26762.1| hypothetical protein SELMODRAFT_96499 [Selaginella moellendorffii]
Length = 383
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 223/384 (58%), Gaps = 12/384 (3%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECD 459
+E Q I D T++ L+ AC + +L + + +H + L L V IL MYS+C
Sbjct: 1 MELQGIHADTVTYASLLDACSNLASLSQGRKLHARIAELGLLEADVVLQTSILTMYSKCG 60
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+ +A +F + E+++ +W +I +A+NG A+ +F + +QAG K + F+ V
Sbjct: 61 RLGEARGIFDRIGEKNIVAWSAIIIAYAQNGDCSTALKLFWKMEQAGQKASETTFVSVLY 120
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ACS G V + +F +M + + P HY IVD+LG G L +A E I++M
Sbjct: 121 ACSHAGLVDDAYYYFTTMMSERKLEPLPGHYGCIVDLLGRAGRLADAEELIQRMKAPHSG 180
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASELAKE 632
+W L+ C+ HG++ L +R AE + +LDP N S+AG + AS + K
Sbjct: 181 VLWTTLLGACKTHGDMMLAERAAERIRELDPGSATPYVLLSNVYSEAGRWDLAAS-VRKR 239
Query: 633 KEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
+N KK A ++ +EVR K+HE+ AGD SHP+ +I ++ L A +KEAGY +
Sbjct: 240 MDNMKVKKPAGKSWVEVRGKLHEFVAGDQSHPKIGEIVLELKRLLALIKEAGYAADKSAT 299
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
LH+ ++E KE L HSE+LA+ GLL SP P++++KNLRVC DCH+A K ISK+V R
Sbjct: 300 LHNAEEEEKEGLLYYHSEKLAIVMGLLHSPRGEPVQVVKNLRVCSDCHAAAKFISKVVDR 359
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
++++RD K+FHHF+ G CSC DYW
Sbjct: 360 QIVLRDTKQFHHFEHGRCSCGDYW 383
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 232/405 (57%), Gaps = 15/405 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G +EA+E+ L+++ + + T++ ++ A AL+ K VH H+ R
Sbjct: 232 ISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEV 291
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS- 500
P V N ++ MYS+C ++ A +F + ER + SW+ M+ G++K+G G + +++F+
Sbjct: 292 PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNL 351
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +KPD + V S CS G +GM + ++ S + P KHY +VDMLG
Sbjct: 352 MIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGR 411
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G ++ A EF++KMP EP +W L+ C +H NL++G+ + Q++P N +
Sbjct: 412 AGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPE--NAGNYV 469
Query: 620 GLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS L +K K ++ +E+ +H + A D SHP +++ A
Sbjct: 470 ILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSA 529
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ L A+ KEAGY+P+ VLHD+D+E KE+ LL+HSE+LA++ GL+++P PIR++K
Sbjct: 530 KVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIK 589
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCH+ K SKI GRE+ +RD RFH G CSC DYW
Sbjct: 590 NLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
+ + +++EA+ + L + + + ++ ++ C +A+ E + VH H+ + V
Sbjct: 37 IHDTRLREALLHMAL---RGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCV 93
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
++ Y +CDS+ DA VF M ER++ SW MI+ +++ G A+ +F Q ++
Sbjct: 94 YLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153
Query: 506 GLKPDDQIFIGVFSAC-SALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGY 562
G +P++ F V ++C + G V+ +H + +Y YV S++DM G
Sbjct: 154 GTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNY----EAHVYVGSSLLDMYAKDGK 209
Query: 563 LDEALEFIEKMPMEPDV 579
+ EA + +P E DV
Sbjct: 210 IHEARGIFQCLP-ERDV 225
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ +C + + +H H+ +L V + +L MY++ + +A +F +
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCL 220
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
ERD+ S +I+G+A+ GL E+A+++F + ++ G++ + + V +A S L + G
Sbjct: 221 PERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGK 280
Query: 531 MLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + VPS YV S++DM G L A + + E V W ++
Sbjct: 281 QVHNHLLRSE---VPS---YVVLQNSLIDMYSKCGNLTYARRIFDTLH-ERTVISWNAML 333
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 232/402 (57%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ KEA+ + ++ + ++ AC AL+ VH ++ +
Sbjct: 195 MISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKC 254
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C S+D A FS +RD++++ I+G A NG E+A+ +F
Sbjct: 255 VRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFE 314
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K G+ PD +I V ACS G V +G +F SMS +GI P + HY +VD+LG
Sbjct: 315 QMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRA 374
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G L+EA +F+ MP++PD +W L+ CR++GN E+G R ++ + D S
Sbjct: 375 GLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLS 434
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ +S G + + ++ ++ +L+EV VHE+ +GD SH +T++IY +
Sbjct: 435 NIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWE 494
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K+ GY ETR V+ D+++E KE + HSE+LAV+ G L + + + +RI+KN+R
Sbjct: 495 EIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLYTKSGSTLRIVKNIR 554
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCH A+K++SK+ R++ IRD K FHHF++GLCSC+DYW
Sbjct: 555 ICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA------- 464
TF+ L Q C + A + + H V + + V N I++ YS C ++DA
Sbjct: 94 TFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDES 153
Query: 465 ------------------------FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S+FS MTER+ SW+ MI+G+A+NG ++A+ +F
Sbjct: 154 SELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFR 213
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +P+ I + V SACS LG + G + K V S+ +++DM
Sbjct: 214 EMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILS-AALIDMYAKC 272
Query: 561 GYLDEALE 568
G +D A++
Sbjct: 273 GSIDLAMQ 280
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 236/411 (57%), Gaps = 20/411 (4%)
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
G++E + + VK+ I ++ + + D T + ++ AC ALE K +H ++
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGE--LKPDSRTMACVLPACASLSALERGKEIHGYI 458
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R N ++ +Y +C + A +F + +DL SW MI G+ +G G +A+
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAI 518
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
F++ + AG++PD+ FI + ACS G + +G F M D+ I P ++HY +VD+
Sbjct: 519 ATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDL 578
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
L TG L +A EFIE +P+ PD +W L+ CR + ++EL ++ AE V +L+P E
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEP----EN 634
Query: 617 SKAGLVPVNA-SELAKEKENKKLASQ------------NLLEVRSKVHEYRAGD-TSHPE 662
S ++ N +E K +E K+L + + +E++ KV+ + +G+ +SHP
Sbjct: 635 SGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPH 694
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
+ I +L++ +R +MKE G+ P+T++ L + D+ KE AL HSE+LA++ GLL+ P R
Sbjct: 695 SKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRK 754
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IR+ KNLRVCGDCH K +SK RE+++RD RFHHFKDG CSCR +W
Sbjct: 755 TIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G + + + + I VDL T ++ C ++ L KAVH +
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
R++ N +L MYS+C +D A VF M ER++ SW +MI G+ ++G + A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV----SIVD 555
Q ++ G+K D + AC+ G + G +H DY +M+ + +++D
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVH------DYIKANNMESNLFVCNALMD 395
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G ++ A M ++ D+ W ++
Sbjct: 396 MYAKCGSMEAANSVFSTMVVK-DIISWNTMI 425
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ AF +F + +RD+ SW++MI+G+ NGL E + I+ Q G+ D I V C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEP 577
+ G L I S + + +++DM G LD AL EKM E
Sbjct: 262 AN-----SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ER 315
Query: 578 DVDVWEKLM 586
+V W ++
Sbjct: 316 NVVSWTSMI 324
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 237/407 (58%), Gaps = 17/407 (4%)
Query: 381 QLDGLVKEGKVKEAIEV---LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
+ G V G+ K A+ + L LE + + T S ++ AC AL+ K VH +++
Sbjct: 163 MIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYID 222
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAV 496
+ + V ++ MY++C S++ A +F N+ E+D+ +W MIT F+ +GL E+ +
Sbjct: 223 KTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECL 282
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
++F++ G++P+ F+ V AC G V EG +F+ M +YG+ P ++HY +VD+
Sbjct: 283 ELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDL 342
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G +++A ++ MPMEPDV +W L+N R+HG++E + + +LDP+ N
Sbjct: 343 YSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDVETCEIAITKLLELDPA--NSS 400
Query: 617 SKAGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L V A +L + + KKL +L+EV + E+ AGD SHPE
Sbjct: 401 AYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLN 460
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
+Y ++ + ++++ GY T VL D+D+EGKE AL HSE+LA+++ L + IR
Sbjct: 461 LYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIR 520
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
I+KNLR+C DCH A+KIISK RE+I+RD RFHHFK+GLCSC+DY
Sbjct: 521 IVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNGLCSCKDY 567
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 45/236 (19%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFS 466
DL TF L+Q+ + H + LL L + ++ MYS C + A
Sbjct: 62 DLHTFPFLLQSINTPH-----RGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQ 116
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ---------------------- 504
F +T+ DL SW+ +I AK G+ A +F Q +
Sbjct: 117 AFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAA 176
Query: 505 ------------AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS 552
+ L+P++ V SAC+ LG + G + K G+ + S
Sbjct: 177 LSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKT-GMKIDVVLGTS 235
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
++DM G ++ A + + E DV W ++ MHG L + C E+ ++
Sbjct: 236 LIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHG---LSEECLELFARM 288
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 218/375 (58%), Gaps = 10/375 (2%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T S +++ C +LE AK H + R + ++ YS+ M+DA+ V
Sbjct: 317 IDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHV 376
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F+ M +++ SW+ +I G+ +G GE+AV++F Q + G+ P+ F+ V SACS G
Sbjct: 377 FNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLS 436
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G F SMS+D+ + P HY +V++LG G LDEA E I P +P ++W L+
Sbjct: 437 ERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLT 496
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVPVNASEL--AKEKENKKL 638
CRMH NLELG AE + ++P + LN + +G + A L K K + L
Sbjct: 497 ACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRML 556
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +EV+ + + + GD SH +T +IY + + ++ GY+ E + +L D+D+E +
Sbjct: 557 PACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEE-E 615
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
+ L HSE+LA++ GL+++P P++I + RVCGDCHSA+K I+ + GRE+++RDA R
Sbjct: 616 QRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASR 675
Query: 759 FHHFKDGLCSCRDYW 773
FHHF+DG CSC DYW
Sbjct: 676 FHHFRDGSCSCGDYW 690
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 4/225 (1%)
Query: 371 RSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDL--PTFSQLMQACGDAKALEE 428
R + ++G Q++ LV + +EA+E+ +LE + D+ T+ L+ AC +++
Sbjct: 76 RKTSSSGLCIQIEKLVLCNRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRG 135
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
K V ++ + N +L ++ +C M DA +F M E+D+ SW TMI GF
Sbjct: 136 VKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVD 195
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
+G +A +F + + F + A + LG V G S + G+
Sbjct: 196 SGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR-QIHSCALKRGVGDDTF 254
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+++DM G +++A ++MP + V W ++ +HG
Sbjct: 255 VSCALIDMYSKCGSIEDAHCVFDQMPEKTTVG-WNSIIASYALHG 298
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 19/255 (7%)
Query: 379 LEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ + G V G EA + + ++ TF+ +++A ++ + +H +
Sbjct: 187 MTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALK 246
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
++ MYS+C S++DA VF M E+ W+++I +A +G E+A+
Sbjct: 247 RGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSF 306
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK---DYGIVPSMKHYVSIVD 555
+ + + +G K D V C+ L + ++ + D IV + ++VD
Sbjct: 307 YYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN----TALVD 362
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
G +++A +M +V W L+ +GN G+ E+ EQ+
Sbjct: 363 FYSKWGRMEDAWHVFNRMR-RKNVISWNALIA---GYGNHGQGEEAVEMFEQM------- 411
Query: 616 KSKAGLVPVNASELA 630
+ G++P + + LA
Sbjct: 412 -LREGMIPNHVTFLA 425
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 223/390 (57%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+A+E+ L+EK + D T + ++ CG+ A K +HE ++R + N ++
Sbjct: 276 KAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALM 335
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C + DA +F M+ RD+ SW ++I+ + K+G G +AVD+F + GL+PD
Sbjct: 336 DMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSI 395
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ V +ACS G + +G +F+SM+ Y I+P +HY +VD+LG G ++EA +FI
Sbjct: 396 AFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITT 455
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP-- 623
M +EP+ VW L+ CR+H N+++G A+ + L P + N ++AG
Sbjct: 456 MLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADV 515
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+ + K KK +++E+ +VH + GD HP+++ IY + L +++ GY
Sbjct: 516 TSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYN 575
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
PE LHD+++E KE+ L HSE+LA++ LL++ IR+ NLR C DCH A K+I
Sbjct: 576 PEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLI 635
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S I RE++++D R HH G+CSC DYW
Sbjct: 636 SIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ +++C +K L +H V +L V + + MYS C +DA+ VF M
Sbjct: 125 TYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGM 184
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACSALGDVVEG 530
RD+ SW+ MI GFA+ GL + A+++F QF G PD G+ A+G+
Sbjct: 185 PHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGIL---PAMGNAKPD 241
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE---FIEKMPMEPDVDVWEKLMN 587
+ F D + + +++ + + + +A+E +EK +EPD ++
Sbjct: 242 DIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLP 301
Query: 588 LCRMHGNLELGDRCAEIVEQ 607
C +G R EI+++
Sbjct: 302 PCGELSAFSVGKRIHEIIKR 321
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 228/375 (60%), Gaps = 23/375 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVSTYNGILKMYSECDSMDDAF 465
T ++ AC A++ + +H ++++ L S LR S ++ MY++C ++ A
Sbjct: 338 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS----LIDMYAKCGDIEAAQ 393
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF +M R L+SW+ MI GFA +G A DIFS+ ++ G++PDD F+G+ SACS G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSG 453
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ G F SM++DY I P ++HY ++D+LG +G EA E I M M+PD +W L
Sbjct: 454 MLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSL 513
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELAK------EKE 634
+ C+MHGN+ELG+ A+ + +++P N S L + A+ E+AK +K
Sbjct: 514 LKACKMHGNVELGESFAQNLIKIEPK--NSGSYVLLSNIYATAGRWNEVAKRRALLNDKG 571
Query: 635 NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
KK+ + +E+ S VHE+ GD HP +IY ++ + ++EAG++P+T VL +++
Sbjct: 572 MKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEME 631
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+E KE AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I R
Sbjct: 632 EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 691
Query: 755 DAKRFHHFKDGLCSC 769
D RFHHF DG+CSC
Sbjct: 692 DRTRFHHFXDGVCSC 706
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G KEA+E+ + K + D T ++ AC + ++E + VH ++
Sbjct: 207 ISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGF 266
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ +Y +C ++ A +F ++ +D+ SW+T+I G+ L ++A+ +F +
Sbjct: 267 GSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 326
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
++G P++ + + AC+ LG + G +H + G+ S++DM
Sbjct: 327 MLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKC 386
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + + M + + W ++ MHG
Sbjct: 387 GDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHG 418
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC +KA E + +H HV +L L + + ++ MY + +DA VF
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
+ RD+ S W+ +I+G+A+ G ++A+++F
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + +KPD+ + V SAC+ + G S D+G ++K +++D+
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGR-QVHSWIDDHGFGSNLKIVNALIDLYIKC 283
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A E + + DV W L+
Sbjct: 284 GEVETASGLFEGLSYK-DVISWNTLI 308
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 239/439 (54%), Gaps = 25/439 (5%)
Query: 348 QNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE---KQ 404
Q G A +V + H D A + ++ + ++A+ + +++ +
Sbjct: 153 QRGGDACKVFDEMPHRDTVAWNV----------MISCCIRNNRTRDALSLFDVMQGSSYK 202
Query: 405 CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDA 464
C D+ T L+QAC ALE + +H ++ ++ N ++ MYS C +D A
Sbjct: 203 CEPDDV-TCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGCLDKA 261
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ VF M +++ SW MI+G A NG G +A++ F + + G+ PDDQ F GV SACS
Sbjct: 262 YEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYS 321
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G V EGM F MS+++G+ P++ HY +VD+LG G LD+A + I M ++PD +W
Sbjct: 322 GMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRT 381
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLVPVNASELAKEKENKK 637
L+ CR+HG++ LG+R + +L LN S AG +E+ K +NK
Sbjct: 382 LLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWE-KVAEVRKLMKNKS 440
Query: 638 LASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDID 694
+ + + +E++ VHE+ D SH +IY + + Q++ AGY+ E LH +D
Sbjct: 441 IQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSELHKMD 500
Query: 695 QEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIR 754
+ K L HSE+LAV+ G+L++P +R+ NLRVC DCH+ LK+ S + R++++R
Sbjct: 501 DKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNRDVVLR 560
Query: 755 DAKRFHHFKDGLCSCRDYW 773
D RFHHF+ G CSC DYW
Sbjct: 561 DHNRFHHFRGGRCSCSDYW 579
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ +YS C DA VF M RD +W+ MI+ +N DA+ +F + + K
Sbjct: 143 TAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYK 202
Query: 509 --PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
PDD + + AC+ L + G +H M + Y ++ + S++ M G LD+
Sbjct: 203 CEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCN--SLISMYSRCGCLDK 260
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
A E + M +V W +++ M+G
Sbjct: 261 AYEVFKGMG-NKNVVSWSAMISGLAMNG 287
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 211/374 (56%), Gaps = 9/374 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T L+QAC D ALE + +H ++++ + N ++ MYS C MD A+ VF
Sbjct: 229 DKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVF 288
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
MTE+++ SW MI+G + NG G +A++ F + ++ G++P D F V SACS G V
Sbjct: 289 DKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVD 348
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EGM F+ M +++ I P++ HY IVD+LG G LD+A E I M + PD +W L+
Sbjct: 349 EGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGA 408
Query: 589 CRMHGNLELGDRCAEIVEQLDPSR-------LNEKSKAGLV--PVNASELAKEKENKKLA 639
CR+HG+ LG+R E + +L LN S AG +L KEK
Sbjct: 409 CRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTP 468
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+E+ VH++ D SHP DKIY + + Q+K AGY E LH ++ + K
Sbjct: 469 CCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKG 528
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
AL HSE+LA++ G+L++P IRI N+R C DCH+ K IS + R++++RD RF
Sbjct: 529 YALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRF 588
Query: 760 HHFKDGLCSCRDYW 773
HHF++G CSC D+W
Sbjct: 589 HHFQEGRCSCNDFW 602
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-- 506
++ +YS C ++A +F + ++D+ +W+ +I+ +N DA+ +F +
Sbjct: 166 TSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYL 225
Query: 507 LKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+PD + + AC+ L G+ + G + + + + S+ + M G
Sbjct: 226 CQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSL------ISMYSRCG 279
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
+D+A E +KM E +V W +++ M+G+
Sbjct: 280 RMDKAYEVFDKMT-EKNVVSWSAMISGLSMNGH 311
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ER 438
+ GL G +EAIE ++K + TF+ ++ AC ++E A + + E
Sbjct: 302 MISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEF 361
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNG---LGED 494
+++P V Y I+ + +D A+ + +M R D T W T++ +G LGE
Sbjct: 362 MIAP-NVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGER 420
Query: 495 AVDIFSQFK--QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
V+ + K +AG D + + ++S+ V E + K+ GI
Sbjct: 421 IVEHLIELKSQEAG---DYVLLLNIYSSAGNWDKVTE----LRKLMKEKGI 464
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 234/406 (57%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ + EA+ + ++ + D T ++ AC ALE + V ++++
Sbjct: 311 MIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK-- 368
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ T+ N ++ MY +C ++ A VF M +D +W MI G A NG GE+A+ +
Sbjct: 369 NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAM 428
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS +A + PD+ +IGV AC+ G V +G F SM+ +GI P++ HY +VD+LG
Sbjct: 429 FSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLG 488
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G L+EA E I MP++P+ VW L+ CR+H N++L + A+ + +L+P N
Sbjct: 489 RAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE--NGAVY 546
Query: 619 AGLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + A+ +L E+ KK +L+E+ V+E+ AGD SHP++ +IY
Sbjct: 547 VLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIY 606
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + + + +AGY P+T V D+ +E KE AL HSE+LA+++ L+SS IRI+
Sbjct: 607 AKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIV 666
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+C DCH K++S+ RELI+RD RFHHF+ G CSC ++W
Sbjct: 667 KNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 31/156 (19%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
+EK+ +S + T ++ AC K LE K +++++ + + N ++ M++ C
Sbjct: 199 MEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGE 258
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGE--------------------------- 493
MD+A SVF NM RD+ SW +++TGFA G +
Sbjct: 259 MDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRM 318
Query: 494 ----DAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+A+ +F + + + +KPD+ + + +AC+ LG
Sbjct: 319 NRFIEALALFREMQMSNVKPDEFTMVSILTACAHLG 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D TF L++ AL+ K + H + + + M+S C +D A
Sbjct: 103 IKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLAR 162
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF ++ +W+ M++G+ + + + +F + ++ G+ P+ + + SACS L
Sbjct: 163 KVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLK 222
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
D +EG H + ++ ++DM + G +DEA + M DV W +
Sbjct: 223 D-LEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSI 280
Query: 586 MN 587
+
Sbjct: 281 VT 282
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 235/400 (58%), Gaps = 15/400 (3%)
Query: 387 KEGKVKEAIEVL--GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
K GK EA+E+ +LE Q + + T ++QAC ALE+ K +H ++ R
Sbjct: 261 KNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSI 320
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ +Y+ C +++ VF M +RD+ SW+++I+ + +G G A+ IF +
Sbjct: 321 LPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMID 380
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
GL P F+ V ACS G V EG + FESM + + I PS++HY +VD+LG LD
Sbjct: 381 QGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLD 440
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + I+ M +EP VW L+ CR+H N+EL +R + +L+P+ N + L +
Sbjct: 441 EAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPT--NAGNYVLLADI 498
Query: 625 NASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A L + + +K+ ++ +E+R K++ + + D +P+ ++++AL+ L
Sbjct: 499 YAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKL 558
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+MKE GY+P+T+ VL+D+D E KE +L HSE+LA++ GL++S IRI KNLR+C
Sbjct: 559 SMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLC 618
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS K ISK RE+++RD RFH F+DG+CSC DYW
Sbjct: 619 EDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAV 432
S NN L Q L K+G + +A++VL Q + T+ L+ +C +L + +
Sbjct: 47 SNNNNPLIQ--SLCKQGNLNQALQVLS----QEPNPTQHTYELLILSCTRQNSLPQGIDL 100
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H H+ S ++ MYSE DS+D+A VF +R + W+ + G G
Sbjct: 101 HRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYG 160
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS---KDYGIVPSMKH 549
+ +D++ + + G+ D + V AC A V +L+ + +G +
Sbjct: 161 REVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHI 220
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++DM G + A ++MP++ +V W ++
Sbjct: 221 MTTLLDMYARFGCVLNASRVFDQMPVK-NVVSWSAMI 256
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 343 YSGNIQNGMMASQVLNNCKHEDDFAEASR--SSQNNGTLEQLDGLVKE----GKVKEAIE 396
+ G+ Q+ +A++++N D A + T+ + L + G +E ++
Sbjct: 106 HDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLD 165
Query: 397 VLGLLEKQCISVDLPTFSQLMQACGDAKA----LEEAKAVHEHVERLLSPLRVSTYNGIL 452
+ + + + D T++ +++AC ++A L + +H H+ R V +L
Sbjct: 166 LYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLL 225
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ--FKQAGLKPD 510
MY+ + +A VF M +++ SW MI ++KNG +A+++F + + L P+
Sbjct: 226 DMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPN 285
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALE 568
+ V AC+AL + +G ++H + + I+P + V++ G+ E
Sbjct: 286 SVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFE 345
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ-----LDPSRLNEKSKAG 620
+EK DV W L++ +HG G + +I ++ L PS ++ S G
Sbjct: 346 RMEKR----DVVSWNSLISSYGIHG---FGRKAIQIFKEMIDQGLSPSPISFVSVLG 395
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 226/391 (57%), Gaps = 9/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+ + +E CI + T + L + AL +H E+ V N +
Sbjct: 307 EEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNAL 366
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY + + A SVFSNMT ++ +W+ +ITG + +GLG++A+ +F G +P+
Sbjct: 367 IIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNY 426
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
FIGV AC+ L V EG +F + K + IVP ++HY IV +L +G LDEA F+
Sbjct: 427 VTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMR 486
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLV 622
+ DV W L+N C +H + + G + AE + QL+P S ++ + +
Sbjct: 487 SHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDH 546
Query: 623 PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
V +L +E+ KK + LE+R+ H + + D HPE + IY ++ L ++++ GY
Sbjct: 547 VVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGY 606
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+ VLHDI+ E K + L HSE+LAV++GL+ +P+ API ++KNLR+C DCH+A+K+
Sbjct: 607 VPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKL 666
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISK+ R +++RDA RFHHF++G CSC DYW
Sbjct: 667 ISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++GL++ + EA++VL L+ + I + T+ + + C K + K VH + L S
Sbjct: 196 VNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHA--QMLKS 253
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ Y G I+ MY +C ++ + F + R++ SW ++I + +N E+A+++F
Sbjct: 254 DIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLF 313
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
S+ + + P++ +F++ + L + G
Sbjct: 314 SKMEIDCIPPNEYTMAVLFNSAAGLSALCLG 344
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLR---VSTYNGILKMYSECDSMDDAFSVFSNM 471
+L++ DAK L+ + +H H+ R V+ N ++ +Y +CD + A +F +M
Sbjct: 24 KLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSM 83
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK----PDDQIFIGVFSACSA 523
R++ SW ++ G+ +NG + +++F FK+ +K P++ + S+C +
Sbjct: 84 PRRNVVSWSALMAGYMQNG---NPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS 136
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 395 IEVLGLLEKQCISVDL----PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY-- 448
+EV L +K + ++ + + +C D++ E K H + L S L Y
Sbjct: 105 LEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGKQCHGYA--LKSGLEFHQYVK 161
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++++YS+C + A + + D+ ++ ++ G ++ +AVD+ G++
Sbjct: 162 NALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIE 221
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDE 565
++ ++ +F C++L D+ G +H + + D Y+ SI+DM G G +
Sbjct: 222 WNNATYVTIFRLCASLKDITLGKQVHAQMLKSDI----DCDVYIGSSIIDMYGKCGNVLS 277
Query: 566 ALEFIEKM 573
F +++
Sbjct: 278 GRTFFDRL 285
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 226/401 (56%), Gaps = 11/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + A+E+ +++ + T + +++AC LE H H+ +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 291
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L ++ N ++ MY +C S++DA VF+ M ERD+ +W TMI+G A+NG ++A+ +F +
Sbjct: 292 DLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K +G KP+ +GV ACS G + +G +F SM K YGI P +HY ++D+LG G
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LD+A++ + +M EPD W L+ CR+ N+ L + A+ V LDP +
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 622 VPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ N+ + +++ KK + +EV ++H + GD SHP+ ++ +
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++ GY+PET FVL D++ E E++L HSE+LA++ GL++ P IRI KNLR+
Sbjct: 530 LIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRI 589
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH K+ SK+ R ++IR R+HHF+DG CSC DYW
Sbjct: 590 CGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A+E+L L+ + + ++ T+S ++++C + + + +H + + V + +
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSAL 200
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ ++++ +DA SVF M D W+++I GFA+N + A+++F + K+AG +
Sbjct: 201 IDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
V AC+ L + GM H + D ++ + ++VDM G L++AL
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDALRVF 316
Query: 571 EKMPMEPDVDVWEKLMN 587
+M E DV W +++
Sbjct: 317 NQMK-ERDVITWSTMIS 332
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 104/215 (48%), Gaps = 5/215 (2%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
S+ L + L + + A++ + L+ + D T+S+L++ C +A+ E
Sbjct: 23 STDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL 82
Query: 432 VHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491
+ H+ + N ++ MY + + ++DA +F M +R++ SW TMI+ ++K +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV 551
+ A+++ + ++P+ + V +C+ + DV MLH + + G+ +
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV--RMLHCGIIKE--GLESDVFVRS 198
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+++D+ G ++AL ++M + D VW ++
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSII 232
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 245/448 (54%), Gaps = 38/448 (8%)
Query: 325 DQSRRQYQQNP--NEGQYQS-YSGNIQNGMM--ASQVLNNCKHEDDFAEASR---SSQNN 376
D+++ + P N + + +G Q GM+ A V + +D + A+ SQ
Sbjct: 303 DEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 362
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
+ E L ++ G+ E V+ F+ ++ C D ALE +H +
Sbjct: 363 CSEETLQLFIEMGRCGE-------------WVNRSAFACVLSTCADIAALECGMQLHGRL 409
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R + N +L MY +C +M+DA + F M ERD+ SW+TMI G+A++G G++A+
Sbjct: 410 IRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEAL 469
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+IF + KPDD +GV +ACS G V +G+ +F SM D+G+ +HY ++D+
Sbjct: 470 EIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDL 529
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
LG G L EA + ++ MP EPD +W L+ R+H N ELG AE + +L+P N
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPE--NAG 587
Query: 617 SKAGLVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
L + AS + +E+ KK+ + +EV++KVH + AGD HPE +K
Sbjct: 588 MYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEK 647
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IYA + L +MK+AGY+ T VLHD+++E KE L HSE+LAV++G+L+ P PIR
Sbjct: 648 IYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIR 707
Query: 726 IMKNLRVCGDCHSALK----IISKIVGR 749
++KNLRVCGDCH+A K ++ K+ GR
Sbjct: 708 VIKNLRVCGDCHNAFKAWIELMLKVSGR 735
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 382 LDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G ++EA V + E+ +S ++ ++ A + ++EAK + +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFN-----M 311
Query: 441 SPLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
P R V+++N +L Y++ +++A +VF M ++D SW M+ +++ G E+ + +F
Sbjct: 312 MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLF 371
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + G + F V S C+ + + GM LH + YG+ + + +++ M
Sbjct: 372 IEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLAMYF 429
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G +++A E+M E DV W ++ HG G EI + +
Sbjct: 430 KCGNMEDARNAFEEME-ERDVVSWNTMIAGYARHG---FGKEALEIFDMM 475
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++N ++ Y + M +A +F M RD+ SW+ M++G+A+ G D V+ F
Sbjct: 193 VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDA 249
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
A ++ D + V S + G + E F++M + + + ++V +D
Sbjct: 250 APVR-DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAV-----SWNAMVAAYIQRRMMD 303
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
EA E MP +V W ++ G LE + + Q D
Sbjct: 304 EAKELFNMMPCR-NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKD 347
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++NG+L Y +++A +F++ TE D+ SW+ +++G+ + G +A ++F +
Sbjct: 164 SWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDR----- 218
Query: 507 LKPDDQIFIGVF-SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ D + + S + GD+VE F D V + + ++V G L+E
Sbjct: 219 MPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVFTWTAVVSGYAQNGMLEE 273
Query: 566 ALEFIEKMP 574
A + MP
Sbjct: 274 ARRVFDAMP 282
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 229/407 (56%), Gaps = 16/407 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ER 438
+D ++ G+ EA+ + + D S +++AC ALE + VH + E
Sbjct: 221 MIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEG 280
Query: 439 L-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L SP V ++ MY +C MD+A+ VF + +D+ W+ MI G A NG G+ A++
Sbjct: 281 LGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALE 340
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + G P++ F+ V AC+ G V EG F SM D+GI P +HY + D+L
Sbjct: 341 LFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSMC-DHGIEPRREHYGCLADLL 399
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------ 611
G G L+EA + MPMEP W LM+ C MH N+ +G+R + + +L+P
Sbjct: 400 GRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYV 459
Query: 612 -RLNEKSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
N + GL +A L K E+ KK + +E VHE+R+GDT HP+T +IY
Sbjct: 460 VLFNLYAVNGLWE-DAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIY 518
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDID-QEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
AL+ + +++ GY+ +T VL D+D +E K L HSERLA++ G+L++P PIRI
Sbjct: 519 ALLEDMEQRLQLIGYVKDTSQVLMDMDDEEDKGNTLSYHSERLALAFGILNTPRHMPIRI 578
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVC DCH K++SK+ RE+I+RD RFH F+ G+CSC D+W
Sbjct: 579 VKNLRVCRDCHVYAKLVSKLYQREIIMRDRHRFHLFRGGVCSCNDFW 625
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y +C ++ A VF M ER L SW MI + G +A+ +F Q G
Sbjct: 186 SWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNG 245
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVP-SMKHYVSIVDMLGSTGYLD 564
+PD + V AC+ LG + G +H ++ G P ++ ++VDM G +D
Sbjct: 246 FRPDAVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMD 305
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ-LDPSRLNEKSKAGLVP 623
EA + + + DV +W ++ M+G+ G R E+ + LD + +S +V
Sbjct: 306 EAWWVFDGVQSQ-DVVLWNAMIGGLAMNGH---GKRALELFRRMLDMGFVPNESTFVVVL 361
Query: 624 VNASELAKEKENKKL 638
+ + E K++
Sbjct: 362 CACTHTGRVDEGKEI 376
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 247/410 (60%), Gaps = 20/410 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLE-----KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
++G V GK KEA+++ ++ + +S + T S ++ ACG ALE+ K VH ++
Sbjct: 165 INGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYI 224
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDA 495
++ + + ++ MY++C S++ A VF + +++D+ ++ MI A GL ++
Sbjct: 225 DKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDEC 284
Query: 496 VDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+FS+ + + P+ F+G+ AC G + +G +F+ M++++GI PS++HY +V
Sbjct: 285 FQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMV 344
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
D+ G +G + EA FI MPMEPDV +W L++ RM G+++ + + + +LDP +N
Sbjct: 345 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDP--MN 402
Query: 615 EKSKAGLVPVNAS-----ELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPET 663
+ L V A E+ + + KK+ + +EV VHE+ GD S E+
Sbjct: 403 SGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQES 462
Query: 664 DKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAP 723
++IYA++ + +++EAGY+ +T+ VL D++++ KE AL HSE+LA++ L+ + P
Sbjct: 463 ERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTP 522
Query: 724 IRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+RI+KNLR+CGDCH +K+ISK+ RE+++RD RFHHF DG CSCRD+W
Sbjct: 523 VRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSDGSCSCRDFW 572
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 44/255 (17%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGIL 452
I V + C+S D TF L+ + + L + H + LL L + +L
Sbjct: 46 ISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQI--LLFGLDKDPFVRTSLL 103
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ----------- 501
MYS C + A +F +DL +W++++ +AK GL A +F +
Sbjct: 104 NMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSC 163
Query: 502 -----------------FKQAGLKPDDQIFIG--------VFSACSALGDVVEGMLHFES 536
F++ L +++F+ V SAC LG + +G
Sbjct: 164 LINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSY 223
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ K YG+ + +++DM G L+ A + + + DV + ++ M+G
Sbjct: 224 IDK-YGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYG--- 279
Query: 597 LGDRCAEIVEQLDPS 611
L D C ++ ++ S
Sbjct: 280 LTDECFQVFSEMTTS 294
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 227/397 (57%), Gaps = 15/397 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++EA++ L + + ++VD +FS+ + A LEE + +H +L
Sbjct: 515 GHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVA 574
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ + MY +C +DD + R SW+ + + F+++G E A + F + G+K
Sbjct: 575 SATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVK 634
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+ + SACS G V EG+ +++SM K++GI + H V I+D+LG +G EA
Sbjct: 635 PDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAET 694
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE 628
FI++MP+ P VW L+ C+ HGNLELG + E + +LDPS + S L +
Sbjct: 695 FIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPS---DDSAYVLYSNICAT 751
Query: 629 LAKEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
K ++ +K+ Q + +++++K+ + GD SHP+ +IYA + L+
Sbjct: 752 TGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKM 811
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+KEAGYIP+ + L D D+E KE L HSERLA+++GL+SSP + ++I KNLRVCGDC
Sbjct: 812 IKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDC 871
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
HS K S I+GR++++RD RFH F G CSC DYW
Sbjct: 872 HSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ ++ G KE++ + + ++ T S ++ CG L+ + +H V +
Sbjct: 203 MIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFG 262
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MYS+ +DA VF M E+D+ SW++M+ +A++G DA+ + +
Sbjct: 263 WNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLA 322
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ F +ACS EG +LH ++ G+ ++ ++V +
Sbjct: 323 TMFYMRRGANYVTFTSALAACSDPEFATEGKILH--ALVIHVGLHENVIVGNALVTLYAK 380
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLM 586
+G + EA + + MP V W L+
Sbjct: 381 SGLMIEAKKVFQTMPKRDGV-TWNALI 406
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 387 KEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
++G +A+++L + + TF+ + AC D + E K +H V + V
Sbjct: 310 QDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVI 369
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ +Y++ M +A VF M +RD +W+ +I G A + ++A+ F ++ G
Sbjct: 370 VGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEG 429
Query: 507 LKPDDQIFIG-VFSACSALGDVVE 529
+ P + I I V AC A D++E
Sbjct: 430 V-PINYITISNVLGACLAPNDLLE 452
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ C + V HV + VS N ++ M+ S+++A VFS M
Sbjct: 133 TMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGM 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E D SW++MI + +NGL ++++ FS + + + + + C ++ ++ G
Sbjct: 193 DEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGR 252
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
S+ +G ++ +++ M G ++A E + + +E D+ W +M
Sbjct: 253 -GIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDA-ELVFQGMVEKDMISWNSMMACYAQ 310
Query: 592 HGN 594
GN
Sbjct: 311 DGN 313
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQAC-GDAKALEEAKAVHEHVERLLSPLRVSTY--N 449
EA++ L+ ++ + ++ T S ++ AC LE +H + +L+ + Y N
Sbjct: 417 EALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFI--ILTGFQSDEYVQN 474
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C ++ + ++F +T ++ ++W+ M+ A +G E+A+ + ++AG+
Sbjct: 475 SLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNV 534
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D+ F +A + L + EG ++ G + + +DM G G +D+ L
Sbjct: 535 DEFSFSECLAAAAKLAILEEGQ-QLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRI 593
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLE 596
I + P+ W L + HG E
Sbjct: 594 IPR-PINRSRLSWNILTSSFSRHGFFE 619
>gi|296089822|emb|CBI39641.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 273 bits (698), Expect = 3e-70, Method: Composition-based stats.
Identities = 129/296 (43%), Positives = 175/296 (59%), Gaps = 47/296 (15%)
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W+++ITG+A++GL E+A+ +F + +G+ D F+GV SACS G V EG+ FESM
Sbjct: 2 WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 61
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
Y + P +HY +VD+LG G +++A++ I+KMP+E D +W L+ CR H N+
Sbjct: 62 SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNM--- 118
Query: 599 DRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAG-D 657
NL EV +VH + G
Sbjct: 119 -------------------------------------------NLAEVEKRVHMFTGGVS 135
Query: 658 TSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLS 717
T HPE I ++ L ++EAGY P++ FVLHD+D+E K +L HSERLAV+ GLL
Sbjct: 136 TKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLK 195
Query: 718 SPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
P PIR+MKNLRVCGDCHSA+K+I+KI GRE+I+RDA RFHHFKDG CSCRDYW
Sbjct: 196 VPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 251
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 227/400 (56%), Gaps = 15/400 (3%)
Query: 387 KEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
K GK EA+ + E + S + T ++QAC ALE+ K +H ++ R
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY C ++ VF M +RD+ SW+++I+ + +G G+ A+ IF +
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G P F+ V ACS G V EG FE+M +D+GI P ++HY +VD+LG LD
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + ++ M EP VW L+ CR+HGN+EL +R + + L+P N + L +
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK--NAGNYVLLADI 497
Query: 625 NA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A +L + + +KL + +EVR K++ + + D +P ++I+A + L
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
MKE GYIP+T+ VL++++ E KE +L HSE+LA++ GL+++ PIRI KNLR+C
Sbjct: 558 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH K ISK + +E+++RD RFH FK+G+CSC DYW
Sbjct: 618 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 18/224 (8%)
Query: 396 EVLGLLEKQ---CISVDLPTFSQLMQACGDAKA----LEEAKAVHEHVERLLSPLRVSTY 448
EVLGL K + D T++ +++AC ++ L + K +H H+ R V
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL- 507
++ MY+ +D A VF M R++ SW MI +AKNG +A+ F + +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 508 -KPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLD 564
P+ + V AC++L + +G ++H + + I+P + ++V M G G L+
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGRCGKLE 337
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
++M + DV W L++ +HG G + +I E++
Sbjct: 338 VGQRVFDRM-HDRDVVSWNSLISSYGVHG---YGKKAIQIFEEM 377
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L KEGK+K+AI VL Q S T+ L+ CG +L +A VH H+ S
Sbjct: 53 IQSLCKEGKLKQAIRVLS----QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGS 108
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ MYS+ S+D A VF +R + W+ + G GE+ + ++ +
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY---GIVPSMKHYVSIVDMLG 558
+ G++ D + V AC A V ++ + + G + ++VDM
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D A MP+ +V W ++
Sbjct: 229 RFGCVDYASYVFGGMPVR-NVVSWSAMI 255
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 211/371 (56%), Gaps = 29/371 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ C +A AL+ K H ++ R + V ++ MY++C + A S+F+
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEA 454
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD+ W+TM+ GF+ +G G++A+++FS+ + G++P+D F+ +F ACS G
Sbjct: 455 MQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG------ 508
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
M+HY +VD+LG G+LDEA IE MPM P+ +W L+ C++
Sbjct: 509 --------------LMEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKL 554
Query: 592 HGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQN 642
H NL LG+ A + +LDP S + +K + E KK +
Sbjct: 555 HKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLS 614
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+EV VH +++GD + +T K+Y ++ + +++E+GY P T VL +ID+E KE AL
Sbjct: 615 WIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESAL 674
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LA + GL+S+ PIRI+KNLR+C DCH+A K++SKI GR +I+RD RFHHF
Sbjct: 675 SYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHF 734
Query: 763 KDGLCSCRDYW 773
+G CSC YW
Sbjct: 735 SEGYCSCMGYW 745
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+ CG L+ K H ++ R + ++ ++ MY +C + A ++F+ +
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++D+ W +I+ +A + ++F + +KP++ + + S C+ G + G
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+++ +G+ + ++++M G + A + M+ D+ +W +M M
Sbjct: 414 WTHAYINR-HGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSM 471
Query: 592 HG 593
HG
Sbjct: 472 HG 473
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 10/212 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLP--TFSQLMQACGDAKALEEAKAVHEHVER 438
L V+ EA+ ++ E Q + V L L+ G+ ++ +AVH ++ R
Sbjct: 160 MLGCYVRSKAFGEALRLVR--EMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVR 217
Query: 439 LL--SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
+ + VS ++ MY + + A +F +++R + SW MI G ++ ++
Sbjct: 218 NVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGA 277
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
F++ + L P++ + + + C +G + G H + +G+ S+ +++D
Sbjct: 278 KNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGM--SLALVTALID 335
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M G G + A + + DV +W L++
Sbjct: 336 MYGKCGQVGYARALFNGVK-KKDVKIWSVLIS 366
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
++D L++AC A + + + +H ++ V N ++ MY +C + A
Sbjct: 85 ALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARL 144
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M ERD+ SW TM+ + ++ +A+ + + + G+K I + + L D
Sbjct: 145 VFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLD 204
Query: 527 VVEGMLHFESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ G + ++ G + SM +++DM G L A +++ V W
Sbjct: 205 MKSGRAVHGYIVRNVGDEKMEVSMT--TALIDMYCKGGCLASAQRLFDRLSKRSVVS-WT 261
Query: 584 KLMNLCRMHGNLELGDR 600
++ C L+ G +
Sbjct: 262 VMIAGCIRSCRLDEGAK 278
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 222/375 (59%), Gaps = 17/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC AL + + + ++++ L V ++ MY++C +D+A +F M
Sbjct: 245 TMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAM 304
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+++ +W+ +I+G+A NG GE A+ FS+ KPD+ F+GV AC G V EG
Sbjct: 305 RVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGR 364
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+F SM +++G+ P ++HY +VD+LG G+LDEA + I+ M M+PD +W +L+ CR+
Sbjct: 365 TYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRI 424
Query: 592 HGNLELGDRCAEIVEQLDP-------------SRLNEKSKAGLVPVNASELAKEKENKKL 638
HGN++LG+ + + +L+P +R K G V E+ + +K+
Sbjct: 425 HGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEV----REMMDCRRVRKV 480
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ + V+E+ + P +++Y L+ + ++K AGY+ +T +DI++E K
Sbjct: 481 PGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASYDIEEEEK 540
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E +L+ HSE+LA++ GLL SP+ +RI+KNLR+C DCH KI+SK+ R++ +RD R
Sbjct: 541 EHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRNR 600
Query: 759 FHHFKDGLCSCRDYW 773
FHHF G CSC+DYW
Sbjct: 601 FHHFVGGACSCKDYW 615
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++++ E KA+H + ++ V ++ MY C S+ DA VF
Sbjct: 141 DSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVF 200
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ +R++ SW+ +ITG+ N + +D+F + + AG KP + +GV AC+ LG +
Sbjct: 201 DEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALN 260
Query: 529 EGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+G DY ++ V +++DM G +DEA + + M ++ +V W
Sbjct: 261 QG-----RWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVK-NVYTWNV 314
Query: 585 LMNLCRMHG 593
L++ M+G
Sbjct: 315 LISGYAMNG 323
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 232/407 (57%), Gaps = 12/407 (2%)
Query: 377 GTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
G++E + + VK+ I ++ + + D T + ++ AC ALE K +H ++
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGE--LKPDSRTMACVLPACASLSALERGKEIHGYI 458
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R N ++ +Y +C + A +F + +DL SW MI G+ +G G +A+
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAI 518
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
F++ + AG++PD+ FI + ACS G + +G F M D+ I P ++HY +VD+
Sbjct: 519 ATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDL 578
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
L TG L +A EF+E +P+ PD +W L+ CR + ++EL ++ AE V +L+P
Sbjct: 579 LSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYY 638
Query: 617 SKAGLVPVNASELAKEKE-NKKLASQNL--------LEVRSKVHEYRAGD-TSHPETDKI 666
+ A + + K +K+ Q L +E++ KV+ + +G+ +SHP + I
Sbjct: 639 VLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNI 698
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
+L++ +R +MKE G+ P+T++ L + D+ KE AL HSE+LA++ GLL+ P R IR+
Sbjct: 699 ESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRV 758
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCH K +SK RE+++RD+ RFHHFKDG CSCR +W
Sbjct: 759 TKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G + + + + I VDL T ++ C ++ L KAVH +
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
R++ N +L MYS+C +D A VF M ER++ SW +MI G+ ++G + A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV----SIVD 555
Q ++ G+K D + AC+ G + G +H DY +M+ + +++D
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVH------DYIKANNMESNLFVCNALMD 395
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
M G ++ A M ++ D+ W ++
Sbjct: 396 MYAKCGSMEAANSVFSTMVVK-DIISWNTMI 425
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+ AF +F + +RD+ SW++MI+G+ NGL E + I+ Q G+ D I V C
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEP 577
+ G L I S + + +++DM G LD AL EKM E
Sbjct: 262 AN-----SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG-ER 315
Query: 578 DVDVWEKLM 586
+V W ++
Sbjct: 316 NVVSWTSMI 324
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 228/406 (56%), Gaps = 19/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + K EA+ + + + ++ + + AC AL + VH V ++
Sbjct: 173 IAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDL 232
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMT-ERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V N ++ MY++C D F VFS MT + + +W+TMI FA +G G A+++F
Sbjct: 233 DINVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFE 292
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++ D ++ V AC+ G V EG+ F+ M G+ ++KHY S+VD+LG
Sbjct: 293 EMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMV-GRGVNRNVKHYGSVVDLLGRA 351
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR------------CAEIVEQL 608
G L EA I MP+ PDV +W+ L+ C+ +GN+E+ + C + V
Sbjct: 352 GRLGEAYRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 411
Query: 609 DPSRLNEK-SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ E+ G V E K ++ +K+ + +EV +H++ GD SHP+ +IY
Sbjct: 412 NVYAARERWEDVGRV----REAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIY 467
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + +R ++K GY+ ET VLHDI +E KE AL HSE+LAV+ GL+S+ PIR+
Sbjct: 468 AKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVN 527
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH +K+ISKI +E+I+RD RFH FKDG CSCRDYW
Sbjct: 528 KNLRICGDCHVVIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TFS + A A AL E +H H+ R + ++ Y++C +D A VF
Sbjct: 99 DALTFSFSLIASARALALSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVF 158
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ RD+ +W+ +I G A+ +A+ +F++ + G K ++ +G +ACS LG +
Sbjct: 159 DEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALR 218
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +H D I +++ +++DM G+ D+ M V W ++
Sbjct: 219 AGEGVHACVRKMDLDI--NVQVCNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIM 276
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
MHG+ G R E+ E++ +++ S L + A
Sbjct: 277 AFAMHGD---GCRALELFEEMGKTQVEMDSVTYLAVLCA 312
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 226/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG + G ++A+ + + ++ + + T + AC LE +H++++
Sbjct: 318 MVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNG 377
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ MY++C +++ A VF ++ + +W MI G+A +G E A+ F
Sbjct: 378 LHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFK 437
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q AG+KPD+ +F+ + +AC G V G+ F+SM DY I PSMKHY IVDMLG +
Sbjct: 438 QMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRS 497
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-----LNE 615
G L EAL FIE+MPM PD +W L CR H ++ + +L+P+
Sbjct: 498 GQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLS 557
Query: 616 KSKAGLVPVNASE----LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ A L +E L + + K + + +EV +VH + +GD H ++ I +
Sbjct: 558 NAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLE 617
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ A + GYIP T +VLH+++QE KE+ L +H E+LA++ L+ + IRI+KNL+
Sbjct: 618 EIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQ 677
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCHS +K SKI RE+++RD KRFHHFKDG CSCRD+W
Sbjct: 678 VCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+++ ++ +++ MD A +F M E+++ SW TM+ GF++NG E A+ +FS+ + G
Sbjct: 283 SWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEG 342
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++P+ + SAC+ +G + G L KD G+ + ++VDM G ++ A
Sbjct: 343 VRPNAFTIVSALSACAKIGGLEAG-LRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESA 401
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
E + + + W ++ +HG+ E C
Sbjct: 402 SEVFGETE-QKSIRTWTVMIWGWAIHGHSEQAIAC 435
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 238/430 (55%), Gaps = 22/430 (5%)
Query: 326 QSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNN--GTLEQLD 383
++R +++ P Q + NI M +Q++ HE + SR + N +
Sbjct: 181 EARLLFEKMP---QRDVVTWNI----MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIA 233
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G V+ GK KEAI + +E+ + + T ++ AC D AL+ +HE+ R
Sbjct: 234 GYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKR 293
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N ++ MY +C +++A VF M ER + SW MI G A +G E+A+ +FS
Sbjct: 294 NVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMS 353
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
Q G++P+ FIG+ ACS +G + EG F SM++DYGI+P ++HY +VD+L G L
Sbjct: 354 QVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLL 413
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA EFI MPM+P+ VW L+ CR+H N+E+ + + + +LDP LN+ L
Sbjct: 414 HEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP--LNDGYYVVLSN 471
Query: 624 VNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ A + K+++ KK + + V VHE+ AG+ SHP+T++I+
Sbjct: 472 IYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEE 531
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+ GY+P T VL DI++ K + + HSE+LA+ GL+++PA PIRIMKNLR+
Sbjct: 532 LLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRI 591
Query: 733 CGDCHSALKI 742
C DCHSA +I
Sbjct: 592 CEDCHSAFQI 601
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 33/235 (14%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+AI + L + + D T S +++AC + L + +H VE++ + N I+
Sbjct: 111 DAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIV 170
Query: 453 KMYSECDSMDDA-------------------------------FSVFSNMTERDLTSWDT 481
+Y+ C M +A + +FS M ER++ SW +
Sbjct: 171 HLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTS 230
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI G+ + G ++A+ +F++ ++AG+K ++ + V +AC+ LG + GM S +
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM-RIHEYSNRH 289
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G +++ +++DM G L+EA + E+M E V W ++ MHG E
Sbjct: 290 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ERTVVSWSAMIGGLAMHGRAE 343
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER--DLTSWDTMITG 485
E + VH + + +PL + + + + S A +F + ++ + W++ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKA 102
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIV 544
A+ DA+ +F + +Q + PD V AC L D+ G +LH + + G
Sbjct: 103 LAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH--GVVEKVGFR 160
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ IV + S G + EA EKMP + DV W ++
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVTWNIMI 201
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 242/398 (60%), Gaps = 26/398 (6%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLL------SPLRVS 446
E L L ++ S + P T ++ AC A++ + +H ++++ L S LR S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++ MY++C ++ A VF+++ + L+SW+ MI GFA +G + + D+FS+ ++ G
Sbjct: 410 ----LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
++PDD F+G+ SACS G + G F +M++DY + P ++HY ++D+LG +G EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 567 LEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
E I M MEPD +W L+ C+MHGN+ELG+ AE + +++P N S L + A
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE--NPGSYVLLSNIYA 583
Query: 627 S-----ELAK------EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
S E+AK +K KK+ + +E+ S VHE+ GD HP +IY ++ +
Sbjct: 584 SAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+++AG++P+T VL ++++E KE AL HSE+LA++ GL+S+ + I+KNLRVC +
Sbjct: 644 LLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 703
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH A K+ISKI RE+I RD RFHHF+DG+CSC DYW
Sbjct: 704 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 131/290 (45%), Gaps = 12/290 (4%)
Query: 305 IHQNSPSFYQQDQNGGQYQWDQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHED 364
+H + S Y Q NG + + + + + ++P+ SY+ I+ + N K D
Sbjct: 171 VHTSLISMYVQ--NG---RLEDAHKVFDKSPHR-DVVSYTALIKGYASRGYIENAQKLFD 224
Query: 365 DFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK 424
+ S N + G + G KEA+E+ + K + D T ++ AC +
Sbjct: 225 EIPVKDVVSWN----AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
++E + VH ++ + N ++ +YS+C ++ A +F + +D+ SW+T+I
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIG 340
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGI 543
G+ L ++A+ +F + ++G P+D + + AC+ LG + G +H + G+
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ S++DM G ++ A + + + + W ++ MHG
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++++C +KA +E + +H HV +L L + + ++ MY + ++DA VF
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 472 TERDLTS-------------------------------WDTMITGFAKNGLGEDAVDIFS 500
RD+ S W+ MI+G+A+ G ++A+++F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++PD+ + V SAC+ G + G D+G ++K +++D+
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGR-QVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G L+ A E++P + DV W L+
Sbjct: 315 GELETACGLFERLPYK-DVISWNTLI 339
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 239/403 (59%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + EA+ + ++ + + + T ++ +C +L+ K +H++ ++
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ M+++C S+DDA S+F M +D +W MI +A +G E ++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ F+G+ +ACS G V EG +F M +GIVPS+KHY S+VD+L
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G L++A EFI+K+P+ P +W L+ C H NL+L ++ +E + +LD S
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L ++K + ++ K+++ K+ + +EV + VHE+ +GD T K++ +
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500
Query: 672 GLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++K +GY+P+T V+H +++ + KE L HSE+LA++ GLL++P IR++KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K+IS I GR++++RD +RFHHF+DG CSC D+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC AKALEE + +H +L V ++ MY+EC+ +D A VF +
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E + ++ MITG+A+ +A+ +F + + LKP++ + V S+C+ LG + G
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+K + +K +++DM G LD+A+ EKM + D W ++
Sbjct: 251 W-IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYAN 308
Query: 592 HGNLE 596
HG E
Sbjct: 309 HGKAE 313
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 239/405 (59%), Gaps = 15/405 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSP 442
G +E +KEA+++ L + +D S ++ D LE+ K +H + ++
Sbjct: 182 GYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL 241
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L +S N +L MY +C +A ++F M ER++ SW MITG+ K+G+G AV++F++
Sbjct: 242 LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEM 301
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
++ G++PD ++ V SACS G + EG +F + + I P ++HY +VD+LG G
Sbjct: 302 QENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGR 361
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIV---EQLDPSRL----NE 615
L EA IEKMP++P+V +W+ L+++CRMHG++E+G + EI+ E +P+ N
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNM 421
Query: 616 KSKAGLVPVN--ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
+ AG + E K K KK A ++ +E+ ++H + GD HP ++I+ +++ +
Sbjct: 422 YAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEM 481
Query: 674 RAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL----LSSPARAPIRIMK 728
++K E GY+ F LHD+++E K E+L HSE+LA+ L L IRI K
Sbjct: 482 EKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFK 541
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVCGDCH+ +K +SK++ ++RDA RFH F++GLCSC DYW
Sbjct: 542 NLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++++ C + L++ K VH VE+L + N ++ MYS+C + +A VF+ +
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM- 531
R++ SW+ MI G+ GE+A+++F + ++ G PD + ACS EGM
Sbjct: 67 VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+H + + + ++VD+ + EA + +++ E V W L+
Sbjct: 127 IHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIE-EKSVMSWSTLI 180
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV--STYNGILKMYSECDSMDDAFSVFS 469
T+S ++AC A A E +H + R P + ++ +Y +C M +A VF
Sbjct: 107 TYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFD 166
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF---IGVFSACSALGD 526
+ E+ + SW T+I G+A+ ++A+D+F + +++ + D + IGVF+ + L
Sbjct: 167 RIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQ 226
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ +H ++ YG++ M S++DM G EA +M +E +V W ++
Sbjct: 227 GKQ--MHAYTIKVPYGLL-EMSVANSVLDMYMKCGLTVEADALFREM-LERNVVSWTVMI 282
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
HG +G++ E+ NE + G+ P + + LA
Sbjct: 283 TGYGKHG---IGNKAVEL--------FNEMQENGIEPDSVTYLA 315
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 225/395 (56%), Gaps = 10/395 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
GK EA+ + + + T L+ AC AL++ +H ++ +
Sbjct: 193 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 252
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C + A VF+ M +D+ +W+T+I G A +G ++A +F + K+AG++
Sbjct: 253 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVE 312
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P+D F+ + SACS G V EG + MS YGI P ++HY ++D+L G L+EA+E
Sbjct: 313 PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAME 372
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKA 619
I MPMEP+ L+ CR+HGN ELG+ + + L P S + +K
Sbjct: 373 LIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKK 432
Query: 620 GLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
L K K+ +++E++ VH + AGD SHPE++KIY + + ++K
Sbjct: 433 WDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKS 492
Query: 680 A-GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
A G+ +T VL D+++E KE AL HSE+LA+++GLL ++ IRI+KNLRVC DCH
Sbjct: 493 AIGHSADTGDVLLDMEEEDKEHALPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHH 552
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISK+ GRE+I+RD RFHHF+DG CSC D+W
Sbjct: 553 VTKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 587
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 445 VSTYNGILKMYSECDS-----MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
V G+LK++ + DDAF +FS M RD+ SW++M+ +A+ G +A+ +F
Sbjct: 143 VGVDKGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 202
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + G+KP + + + SAC+ LG + +G LH + D I + ++VDM
Sbjct: 203 DQMRAVGVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAK 261
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
G + A + M + DV W ++ +HG+++ R
Sbjct: 262 CGKISLATQVFNAMESK-DVLAWNTIIAGMAIHGHVKEAQR 301
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 235/415 (56%), Gaps = 17/415 (4%)
Query: 368 EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE 427
E R + ++G G+ EA+ + + + + D T L+ A + ALE
Sbjct: 189 ELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALE 248
Query: 428 EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
+ VH ++ ++ N +L +Y++CD++ + ER+ SW ++I G A
Sbjct: 249 LGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAIWEX--------ERNAVSWTSLIVGLA 300
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSM 547
NG GE+A+++F + + GL P + F+GV ACS G + EG +F M +++GI+P +
Sbjct: 301 VNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRI 360
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQ 607
+HY +VD+L G + +A E+I+ MP++P+ W L+ C +HG+L LG+ + +
Sbjct: 361 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLK 420
Query: 608 LDPSRLNE--------KSKAGLVPVNASELAKEKEN-KKLASQNLLEVRSKVHEYRAGDT 658
L+P + S+ V + K+ KK + +L+E+ ++V+E+ G+
Sbjct: 421 LEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNR 480
Query: 659 SHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS 718
SHP++ +YAL+ + +K GY+P T VL DI++E KE+AL HSE+ A++ L++
Sbjct: 481 SHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNT 540
Query: 719 PARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IR+MKNLRVC DCH A+K+++K+ RE++IRD RFHHF+ G CSC+DYW
Sbjct: 541 APGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I D T+ L++A + + E +A+H R V N +L +Y+ C + A
Sbjct: 126 IEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAH 185
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+VF M +RDL + ++I GFA NG +A+ +F + G++PD + + SA + LG
Sbjct: 186 NVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELG 245
Query: 526 DVVEG 530
+ G
Sbjct: 246 ALELG 250
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 248/448 (55%), Gaps = 22/448 (4%)
Query: 343 YSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLV----KEGKVKEAIEVL 398
Y GNI G + + C+ AEA + ++ + G +EA+ V
Sbjct: 312 YDGNIFVGSALVDMYSKCR-SIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVF 370
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYS 456
++ I + T ++ +C + +LEE H L+S LR ++ + ++ +Y
Sbjct: 371 SEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH--CMALVSGLRPYITVSSALVTLYG 428
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C S++DA +F M D S+ +++G+A+ G ++ +D+F + G+KP+ FIG
Sbjct: 429 KCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIG 488
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
V SACS G V +G +F SM +D+GIV HY ++D+ +G L EA EFI +MP
Sbjct: 489 VLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRC 548
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----ELA- 630
PD W L++ CR+ G++E+G AE + + DP N S L ++AS E+A
Sbjct: 549 PDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQ--NPASYVLLCSMHASKGEWSEVAL 606
Query: 631 -----KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
++++ KK + ++ +++VH + A D SHP + IY ++ L ++M E GY P+
Sbjct: 607 LRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPD 666
Query: 686 TRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISK 745
VLHD+ K L HSE+LA++ GL+ P PIR++KNLRVC DCH+A K ISK
Sbjct: 667 VSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISK 726
Query: 746 IVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I GR++++RDA RFH F +G+CSC D+W
Sbjct: 727 ITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G EA++V + + + +D TF ++ ACG A EE K +H + R L
Sbjct: 252 MVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTL 311
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+C S+ A +VF MT +++ SW MI G+ +NG GE+AV +FS
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFS 371
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G+KP+D V S+C+ L + EG F M+ G+ P + ++V + G
Sbjct: 372 EMQTDGIKPNDFTLGSVISSCANLASLEEGA-QFHCMALVSGLRPYITVSSALVTLYGKC 430
Query: 561 GYLDEALEFIEKMPMEPDV 579
G +++A ++MP V
Sbjct: 431 GSIEDAHRLFDEMPFHDQV 449
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V YN ++ C +++A VF M +RD +W TM+TG +NGL +A+D+F + +
Sbjct: 215 VVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRA 274
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG 530
G+ D F + +AC AL EG
Sbjct: 275 EGVGIDQYTFGSILTACGALAASEEG 300
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 225/391 (57%), Gaps = 10/391 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A V + K+ I + S ++ A LE ++VH + + + +
Sbjct: 242 EKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSAL 301
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C S++D VF M ER+L SW+ MI+G+A G + A+ +F + + + +
Sbjct: 302 VDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA-NY 360
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
I V SACS G V G FESM Y I P +HY I DMLG G ++ A EF++
Sbjct: 361 VTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQ 420
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------RLNEKSKAGLVPVN 625
KMP+ P + VW L+N CR++G ELG A+ + +LDP L+ A
Sbjct: 421 KMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDE 480
Query: 626 ASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A+ + KE ++ KK A + + ++KVH ++A DTSH +I A++ LR +M+ AGY
Sbjct: 481 ATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGY 540
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+T + L+D+++E K + HSE++A++ GL++ P PIRI KNLR+CGDCHSA K
Sbjct: 541 MPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKF 600
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IS IVGRE+I+RD RFH F+D CSCRD+W
Sbjct: 601 ISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL TF + AC DA+ L+ + +H V R VS NGI+ +Y +C ++ A VF
Sbjct: 158 DLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVF 217
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ M R+ SW TM+ +N E A +F ++ G++ D + V SA + + +
Sbjct: 218 NGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLE 277
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G +++ + + ++VDM G G +++ + +MP E ++ W +++
Sbjct: 278 FGR-SVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISG 335
Query: 589 CRMHGNLELG 598
G++++
Sbjct: 336 YAHQGDVDMA 345
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+ D + A + R + +W +I+G +NG A+ FS+ ++ +KP+D
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
F F A +AL G +++ G + S DM TG EA ++M
Sbjct: 61 FPCAFKASTALCLPFAGK-QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 574 PMEPDVDVW 582
P +V VW
Sbjct: 120 PPR-NVAVW 127
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MYS+ +A +F M R++ W+ I+ +G A+D F +F++ G +PD
Sbjct: 102 MYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLIT 161
Query: 514 FIGVFSACS 522
F +AC+
Sbjct: 162 FCAFLNACA 170
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 230/394 (58%), Gaps = 20/394 (5%)
Query: 396 EVLGLLEKQ---CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EVL L+ K +S+D +FS+ + A LEE + +H +L L +N
Sbjct: 649 EVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAA 708
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C + + + R L SW+ +I+ ++G E+ + F + + G+KP
Sbjct: 709 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHV 768
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + +ACS G V +G+ +++ ++KD+G+ P+++H + ++D+LG +G L EA FI K
Sbjct: 769 TFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 828
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MPM+P+ VW L+ C++H +L+ G + AE + +L+P E ++ N
Sbjct: 829 MPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEP----EDDSVFVLSSNMFATTGR 884
Query: 633 KEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
E+ K++ +N+ ++++ KV + GD +HP+T +IYA + ++ +KE
Sbjct: 885 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 944
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
+GY+ +T L D D+E KE L HSERLA+++ L+S+P + +RI KNLR+C DCHS
Sbjct: 945 SGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 1004
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +S+++GR +++RD RFHHF+ GLCSC+DYW
Sbjct: 1005 YKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 13/234 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTF--SQLMQACGDAKAL-EEAKAVHEHV 436
+ G+V+ G E +E +K C + + +F + L+ ACG + ++ E VH V
Sbjct: 130 MMSGIVRVGLYLEGME---FFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186
Query: 437 ER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
+ LLS + VST IL +Y + + VF M +R++ SW +++ G++ G E+
Sbjct: 187 AKSGLLSDVYVST--AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 244
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+DI+ + G++ ++ V S+C L D G + K G+ + S++
Sbjct: 245 VIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKS-GLESKLAVENSLI 303
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
M G+ G +D A +I E D W ++ +G++E R ++ +
Sbjct: 304 SMFGNMGNVDYA-NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRF 356
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++E+ + L+ + V+ T S L+ GD + + +H V ++ V
Sbjct: 341 GHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVC 400
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L+MY+ ++A VF M +DL SW++++ F +G DA+ I + G
Sbjct: 401 NTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKS 460
Query: 509 PDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ F +AC + G ++ G++ + D I+ + ++V M G G +
Sbjct: 461 VNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLF-DNQIIGN-----ALVSMYGKIGGM 514
Query: 564 DEALEFIEKMPMEPDVDVWEKLM 586
+ + +MP DV W L+
Sbjct: 515 STSRRVLLQMP-RRDVVAWNALI 536
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+A+H + L L V N ++ MY++ + A +F M R+ SW+TM++G +
Sbjct: 78 RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
GL + ++ F + G+KP + + +AC G + + G++ +
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 197
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+I+ + G G + + + E+MP + +V W LM
Sbjct: 198 STAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLM 233
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V +G+ +A+ +L + + SV+ TF+ + AC + ++ + +H V ++S
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLV--VVS 492
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + N ++ MY + M + V M RD+ +W+ +I G+A+N + A+ F
Sbjct: 493 GLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAF 552
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ G+ + + V SAC GD++E
Sbjct: 553 QTLRVEGVSANYITVVSVLSACLVPGDLLE 582
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 9/220 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQAC---GDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A+ L + +S + T ++ AC GD LE K +H ++ N
Sbjct: 547 KALAAFQTLRVEGVSANYITVVSVLSACLVPGDL--LERGKPLHAYIVSAGFESDEHVKN 604
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C + + +F+ + R + +W+ ++ A +G GE+ + + S+ + GL
Sbjct: 605 SLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSL 664
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F SA + L + EG ++ G + + DM G + E ++
Sbjct: 665 DQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKM 723
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
+ + + W L++ HG E + C E L+
Sbjct: 724 LPP-SVNRSLPSWNILISALGRHGYFE--EVCETFHEMLE 760
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 236/396 (59%), Gaps = 20/396 (5%)
Query: 393 EAIEVLGLL--EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG 450
E + +LG + E +C V+ T ++ AC + + K +H + R +S L V
Sbjct: 182 ECLMLLGKMSSEGRC-RVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTS 240
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY + ++ VF NM+E++ S+ MI+G A +G G++A+ +FS+ + GL PD
Sbjct: 241 LIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPD 300
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
D +++GVFSACS G V EG+ F+SM ++ I P+++HY +VD+LG G L EA E I
Sbjct: 301 DVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELI 360
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
+ M ++P+ +W L++ C++H NLE+G AE + L+ + S LV N A
Sbjct: 361 KSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNN----SGDYLVLANMYAKA 416
Query: 631 KE-----KENKKLASQN--------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
++ K KLA +N L+E + KV+++ + D S P+ + IY +I + Q+
Sbjct: 417 QKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQL 476
Query: 678 KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCH 737
K GYIP+T VL D+D E K+E L HS++LA++ GL+ + +P+RI +NLR+C DCH
Sbjct: 477 KFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCH 536
Query: 738 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ K IS I RE+ +RD RFHHFK+G CSC+DYW
Sbjct: 537 TYTKYISMIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V + K++EA+ + + ++ + D T+ +++AC ++E VH HV ++
Sbjct: 69 MIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMG 128
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V N ++ MY +C + +A VF+ M E+ + SW +I A + + + +
Sbjct: 129 LEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLG 188
Query: 501 QFKQAG-LKPDDQIFIGVFSACSALGD-----VVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ G + ++ + V SAC+ LG + G+L ++S+ +V + S++
Sbjct: 189 KMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGIL-LRNISELNVVVKT-----SLI 242
Query: 555 DMLGSTGYLDEALEFIEKM 573
DM +G L++ L + M
Sbjct: 243 DMYVKSGCLEKGLRVFKNM 261
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 426 LEEAKAVHEHVER---LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTM 482
+EE K VH HV + +S + ++ SMD A S+F+ + E ++TM
Sbjct: 11 MEEFKQVHAHVLKCGIFFDTFCMSNLVATCAL-TKWGSMDYACSIFTQIDEPSSFDYNTM 69
Query: 483 ITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML---HFESMSK 539
I G + E+A+ ++ + G++PD + V ACS LG V EG+ H M
Sbjct: 70 IRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGL 129
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
+ ++ S+++M G G + A + M E V W ++ H +E+ +
Sbjct: 130 EGDVIVQN----SLINMYGKCGEIKNACDVFNGMD-EKSVASWSAIIG---AHACVEMWN 181
Query: 600 RCAEIVEQL 608
C ++ ++
Sbjct: 182 ECLMLLGKM 190
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 222/373 (59%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ +C AL + K +H + + V+ + ++ MY++C + + VF +
Sbjct: 515 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 574
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
R++ +W+ ++ + +G +DA+D+ G+KP++ FI VF+ACS G V EG+
Sbjct: 575 PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGL 634
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKLMNLCR 590
F +M KDYG+ PS HY +VD+LG G + EA + I +P D W L+ CR
Sbjct: 635 KIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACR 694
Query: 591 MHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASEL---AKEKENKKLAS 640
+H NLE+G+ A+ + QL+P+ N S AGL A+E+ K + +K
Sbjct: 695 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLW-YKATEVRRNMKAQGVRKEPG 753
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E +VH++ AGD+SHP+++K+ + L +M++ GYIP+T VLH+++++ KE
Sbjct: 754 CSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEI 813
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ G+L++ IR+ KNLRVC DCH A K ISK+V RE+I+RD +RFH
Sbjct: 814 LLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFH 873
Query: 761 HFKDGLCSCRDYW 773
HFK+G CSC DYW
Sbjct: 874 HFKNGTCSCGDYW 886
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T + ++ AC + A + +A+H V +R L R N ++ MYS +D A +F
Sbjct: 403 TMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRF-VQNALMDMYSRLGKIDIAKRIFGK 461
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK-----------QAGLKPDDQIFIGVFS 519
M +RDL +W+T+ITG+ + EDA+ + + + + LKP+ + +
Sbjct: 462 MEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILP 521
Query: 520 ACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
+C+AL + +G +H ++ + ++ ++VDM G L + + +++P+ +
Sbjct: 522 SCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMYAKCGCLQMSRKVFDQIPIR-N 578
Query: 579 VDVWEKLMNLCRMHGN 594
V W ++ MHGN
Sbjct: 579 VITWNVIVMAYGMHGN 594
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L + + EA+E L + + + D T S ++ AC + L K +H + + S
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +++ G ++ MY C + VF M +R + W+ MITG+A+N E+A+ +F
Sbjct: 330 -LDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388
Query: 500 SQFKQ-AGLKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYV-- 551
+ ++ AGL + GV AC G + + G + + +D +V
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRD--------RFVQN 440
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++DM G +D A KM + D+ W ++
Sbjct: 441 ALMDMYSRLGKIDIAKRIFGKME-DRDLVTWNTIIT 475
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 370 SRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA 429
S+S ++ L V+ ++EA+ + I D F L++A D + ++
Sbjct: 53 SQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLG 112
Query: 430 KAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
K +H HV + + V+ N ++ +Y +C + VF ++ER+ SW+++I+
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 172
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
E A++ F ++P + V ACS
Sbjct: 173 FEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS 206
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 221/386 (57%), Gaps = 27/386 (6%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
L EK I D T+ L + C D A + + H ++ L S N ++ MYS+C
Sbjct: 519 LTEKDVIP-DWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCG 577
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+ +A +F ++ +DL SW+ MITG++++G+G+ A++IF + G KPD ++ V S
Sbjct: 578 RISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLS 637
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+CS G V EG +F+ + +D+ + P ++H+ +VD+L G L EA I++MPM+P
Sbjct: 638 SCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTA 697
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELA 630
+VW L++ C+ HGN EL + A+ + LD +++ + + +L
Sbjct: 698 EVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLM 757
Query: 631 KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
++K KK + +EV++KVH ++A D SHP+ I + L ++ + GY+
Sbjct: 758 RDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV------- 810
Query: 691 HDIDQEGKEEAL---LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
+ E+L + HSE+LAV+ G+++ PA PI IMKNLR+CGDCH+ +K+IS +
Sbjct: 811 -------RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVT 863
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
GRE +IRDA RFHHFK G CSC DYW
Sbjct: 864 GREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 2/215 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ L + G+ +EA+ V + + + +D T++ + AC +L K +H V R L
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL 324
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++++Y++C +A VFS++ +R+ SW +I GF + G +++++F+
Sbjct: 325 PCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFN 384
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + D + S CS D+ S+S G ++ S++ M
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLAR-QLHSLSLKSGHTRAVVISNSLISMYAKC 443
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
G L A M E D+ W ++ GN+
Sbjct: 444 GNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGNI 477
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
A+++LGLL K D + ++ A++ A +ER P V N +L
Sbjct: 181 ALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIER---P-TVFCRNSMLA 236
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
Y++ +D A +F +M ERD+ SW+ M++ +++G +A+ + G++ D
Sbjct: 237 GYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTT 296
Query: 514 FIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEA 566
+ +AC+ L + G LH + + +P + YV ++V++ G EA
Sbjct: 297 YTSSLTACAKLSSLGWGKQLHAQVIRS----LPCIDPYVASAMVELYAKCGCFKEA 348
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 34/175 (19%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+N ++ Y++ S+ DA +F M RD+TSW+T+++G+ ++G DA++ F ++
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 505 AG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY- 562
+G P+ F +C ALG E L + +G IVDM G
Sbjct: 155 SGDSLPNAFTFGCAMKSCGALG-WHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213
Query: 563 ------------------------------LDEALEFIEKMPMEPDVDVWEKLMN 587
+D ALE E MP E DV W +++
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMP-ERDVVSWNMMVS 267
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/264 (17%), Positives = 109/264 (41%), Gaps = 47/264 (17%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-------- 433
+ G ++ G E++E+ + + ++VD + ++ C + + A+ +H
Sbjct: 367 IGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGH 426
Query: 434 --------------------EHVERLLSPLR---VSTYNGILKMYSECDSMDDAFSVFSN 470
++ E + S + + ++ G+L YS+ ++ A F
Sbjct: 427 TRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDG 486
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACS-----AL 524
M+ R++ +W+ M+ + ++G ED + ++S + + PD ++ +F C+ L
Sbjct: 487 MSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKL 546
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
GD + G + G++ +++ M G + EA + + + D+ W
Sbjct: 547 GDQITG------HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWNA 599
Query: 585 LMNLCRMHGNLELGDRCAEIVEQL 608
++ HG +G + EI + +
Sbjct: 600 MITGYSQHG---MGKQAIEIFDDM 620
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 224/391 (57%), Gaps = 15/391 (3%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
+ ++ + + ++ D+ T ++ C A + K +H + +L V N +++M
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 620
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
YS+C S+ ++F VF M +D+ +W +I+ G G+ AV F + + AG+ PD F
Sbjct: 621 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 680
Query: 515 IGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ + ACS G V EG+ +F M KDY I P ++HY +VD+L + LD+A +FI MP
Sbjct: 681 VAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMP 740
Query: 575 MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKE 634
++PD +W L++ CRM G+ E+ R +E + +L+P ++ LV + L K +
Sbjct: 741 LKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNP---DDTGYYVLVSNVYAALGKWDQ 797
Query: 635 ----NKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
K + ++ L +E+++KV+ + G + +++ L+ L M + GY
Sbjct: 798 VRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGY 857
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
I +FVLHDID++ K + L HSERLA++ GLL++ P+++MKNLRVC DCH+ K
Sbjct: 858 IANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKY 917
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
ISKI REL++RDA RFH FKDG CSC DYW
Sbjct: 918 ISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
DL T + ++QACG LE K VH+++ + N ++ MY++C ++ + VF
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
S M +D SW++MI + +NG ++A+ +F K +KPD ++ + S + LGD+
Sbjct: 434 SGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLX 492
Query: 529 EGM-LH--FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
G LH M + IV S ++VDM G + ++L+ E M D+ W +
Sbjct: 493 LGKELHCDLAKMGFNSNIVVSN----TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTI 547
Query: 586 MNLCRMHGNLELGDRCAEIV--EQLDPSRLNEKSKAGLVPVNASELAKEKENKKL 638
+ C + LG R + E + P + + ++PV S LA +++ K++
Sbjct: 548 IASCVHSEDCNLGLRMISRMRTEGVTP---DMATMLSILPV-CSLLAAKRQGKEI 598
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 11/212 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G EA+E+ + D T S +++ACG ++EE +H +E++ V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
NG+L MY + + + D +F M RD SW+TMI G+++ GL E+++ +F + K
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FK 372
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVS----IVDMLGSTGYLD 564
PD + AC LGD L F DY I + + +++M G L
Sbjct: 373 PDLLTITSILQACGHLGD-----LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 427
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
+ E M + V W ++N+ +G+ +
Sbjct: 428 ASQEVFSGMKCKDSVS-WNSMINVYIQNGSFD 458
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ L G EA+ + ++ + D TF ++ AC E AK++H+ V +
Sbjct: 146 IRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGF 205
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ MY + +D A VF M RD+ SW+++I+G+ NG +A++I+ +
Sbjct: 206 GSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYR 265
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG 530
F+ G+ PD V AC LG V EG
Sbjct: 266 FRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 24/250 (9%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
++ G EA+++ +++ + D T+ L+ L K +H + ++ +
Sbjct: 452 IQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNI 510
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY++C M D+ VF NM RD+ +W+T+I + + + S+ +
Sbjct: 511 VVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 570
Query: 506 GLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G+ PD + + CS L G + G + + D VP +++M
Sbjct: 571 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD---VPVGN---VLIEMYSKC 624
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G L + + + M + DV W L++ C M+G + R E AG
Sbjct: 625 GSLRNSFQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRA-----------FGEMEAAG 672
Query: 621 LVPVNASELA 630
+VP + + +A
Sbjct: 673 IVPDHVAFVA 682
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
FS + +A A + +H + L V ++ Y+ +FSVF +
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 473 -ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ W+++I NGL +A+ ++S+ ++ L+PD F V +AC+ G+
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA-------GL 187
Query: 532 LHFESMSKDYGIVPSMKH----YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
L FE + V M Y+ +++DM LD+A + E+MP+ DV W L
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 246
Query: 586 MN 587
++
Sbjct: 247 IS 248
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 216/373 (57%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC A + K +HE + L V ++ MY++C ++ + VF +
Sbjct: 192 TVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEI 251
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+++ +W+ +I+G+A NG G+ A+ FS+ KPD+ F+GV AC G V EG
Sbjct: 252 REKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGR 311
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F SM + +G+ P ++HY +VD+LG G L+EALE I+ M +EPD +W L+ CR+
Sbjct: 312 WQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRV 371
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL-------- 643
HGN +LG+ + + +L+P+ N ++ L + + E + K NL
Sbjct: 372 HGNTKLGEYIIKRLIELEPN--NGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPG 429
Query: 644 ---LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+E+ + V+E+ A + PE + IY + L ++KE GY+ T L+DI++E KE
Sbjct: 430 CSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEH 489
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+++ HSE+LA++ GLL+SP +RI+KNLR+C DCH K++S + R +++RD RFH
Sbjct: 490 SVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFH 549
Query: 761 HFKDGLCSCRDYW 773
HF +G CSCRDYW
Sbjct: 550 HFYEGFCSCRDYW 562
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
++ + L+ K I D TF +++A K +H V ++ V T ++
Sbjct: 73 SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y C S+ DA +F M ER+ +W+ +ITG+ N A+D F G +P ++
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIE 571
+ V SACS LG +G E + Y + +V +++DM G + E + E
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFI---YHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
++ E +V W L++ M+G
Sbjct: 250 EIR-EKNVYTWNVLISGYAMNG 270
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 211/373 (56%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T L+QAC AL+ + V E+ + N ++ MY++C +D A+ VF
Sbjct: 230 TCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCET 289
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++ + +W MI+G A NG G+DA+ F + ++G+ PD+Q F GV SACS G V EG
Sbjct: 290 PKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGF 349
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK-MPMEPDVDVWEKLMNLCR 590
F+ M +Y + P++ HY +VD++G G LD+A E + K M + PD +W L+ CR
Sbjct: 350 KFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACR 409
Query: 591 MHGNLELGDRCAEIVEQLDPSR-------LNEKSKA---GLVPVNASELAKEKENKKLAS 640
+HG+++LG+R + +L + LN + G V +L KEK +
Sbjct: 410 IHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWGKV-AEVRKLMKEKGIQTTPG 468
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+E+ ++HE+ A D SHP +IY + + ++ AGY+P LHD+D EGKE
Sbjct: 469 CTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRIAGYVPNVSSELHDLDSEGKEC 528
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
AL HSE+LA++ LL +P PIR+ KNLRVC DCH+ K+ S + R +I+RD RFH
Sbjct: 529 ALAYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKVFSGVYHRLVIVRDRTRFH 588
Query: 761 HFKDGLCSCRDYW 773
HFK+ CSC DYW
Sbjct: 589 HFKEFQCSCNDYW 601
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 421 GDAKALEEAKAVHEHV-------ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
G +AL A+ +H +V + LL+ VS+Y + C D A VF M
Sbjct: 136 GHCRALAHARQLHANVVAEGHSPDALLATSLVSSY-------AACGDGDSARKVFDEMPV 188
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFK--QAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD +W+ +IT + +N +DA+ +F + + G +PDD I + AC++LG + G
Sbjct: 189 RDTIAWNVLITCYTRNRRTKDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGE 248
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+E + D+G +K S++ M G +D+A + + P + V W +++
Sbjct: 249 KVWE-YAVDHGYGGELKVRNSLITMYTKCGCVDKAYQVFCETP-KKSVVTWSAMIS 302
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 246/410 (60%), Gaps = 20/410 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLE-----KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV 436
++G V GK KEA+++ ++ + + + T S ++ ACG ALE+ K VH ++
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDA 495
++ + + ++ MY++C S++ A VF+ + +++D+ ++ MI A GL ++
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 496 VDIFSQFKQA-GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+FS+ + + P+ F+G+ AC G + EG +F+ M +++GI PS++HY +V
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
D+ G +G + EA FI MPMEPDV +W L++ RM G+++ + + + +LDP +N
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDP--MN 403
Query: 615 EKSKAGLVPVNASE--------LAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPET 663
+ L V A + E E K K+ + +EV VHE+ GD S E+
Sbjct: 404 SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQES 463
Query: 664 DKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAP 723
++IYA++ + +++EAGY+ +T+ VL D++++ KE AL HSE+LA++ L+ + P
Sbjct: 464 ERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTP 523
Query: 724 IRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+RI+KNLR+CGDCH +K+ISK+ RE+++RD RFHHF+DG CSCRD+W
Sbjct: 524 VRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK- 503
+ +N ++ Y++ +DDA +F M ER++ SW +I G+ G ++A+D+F + +
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 504 ----QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+A ++P++ V SAC LG + +G + K Y + + +++DM
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK-YHVEIDIVLGTALIDMYAK 246
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
G L+ A + + DV + ++ M+G L D C ++ ++ S
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG---LTDECFQLFSEMTTS 295
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 233/403 (57%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ LV+E +EAIEV ++ Q C++VD T + ACG AL+ AK ++ ++E+
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ M+S C + A S+F+++T RD+++W I A G E A+++F+
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + GLKPD +FIG +AC G V +G F SM K +G+ P HY +VD+LG
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G L+EAL+ I+ MP EP+ +W L+ CR+ GN+E+ AE ++ L P R
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLS 679
Query: 614 NEKSKAG----LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG + V S KEK +K +++++R K HE+ +GD SHPE KI A+
Sbjct: 680 NVYASAGRWNDMAKVRLS--MKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAM 737
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ L + + G++P+ VL D+D++ K L HSE+LA++ GL+SS IRI+KN
Sbjct: 738 LDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKN 797
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
LRVC CHS K SK+ RE+I+RD RFH + G CSC D+
Sbjct: 798 LRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G KEAI + + IS D TF + C ++ +H + ++
Sbjct: 105 IRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDY 164
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N ++ Y+EC +D A VF M+ER++ SW +MI G+A+ +DAVD+F +
Sbjct: 165 AKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFR 224
Query: 502 F-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + P+ + V SAC+ L D+ G ++ + +D GI + ++VDM
Sbjct: 225 MVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFI-RDSGIEVNDLMISALVDMYMKC 283
Query: 561 GYLDEA 566
+D A
Sbjct: 284 NAIDIA 289
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER------- 438
V++G KEA+ VL L+ I D + + +C + + K+ H +V R
Sbjct: 312 VRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 371
Query: 439 ------------------------LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+S V T+N I+ Y E +D A+ F+ M E+
Sbjct: 372 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEK 431
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALG--DVVEGM 531
++ SW+T+I+ + + E+A+++F + Q + D + + SAC LG D+ + +
Sbjct: 432 NIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWI 491
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
++ ++ I ++ ++VDM G + A+ + DV W
Sbjct: 492 YYYIEKNR---IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 538
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 59/119 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + LE + V++ + + + ++ MY +C+++D A +F
Sbjct: 237 TMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEY 296
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+L + M + + + GL ++A+ + + +G++PD + S+CS L +++ G
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWG 355
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 221/374 (59%), Gaps = 17/374 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFS 469
T ++ AC A ALE K VH VE+ LR + G ++ MY++C +++ A VF+
Sbjct: 176 TVVSVLSACTGAGALETGKWVHVFVEK--KRLRWDEFLGTALVDMYAKCGAVELALEVFT 233
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVV 528
+ R+ +W+ MI G A NG A+D+F Q + G + PD+ F+GV ACS G V
Sbjct: 234 GLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVD 293
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
G HF ++ + YG+ ++HY +VD+L +G+L EA + I +MPM+PDV VW L+
Sbjct: 294 AGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
Query: 589 CRMHGNLELGDRCAEIVEQLDPS-----RLNEKSKAGLVPVNASE----LAKEKENKKLA 639
CR+H N+++ + ++ +++ + L A + N E + K +K+
Sbjct: 354 CRLHKNVKMAE---NVISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIEKIP 410
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKE 699
+ +E+ +HE+ +GD SHP D I+A + + +M++ GY+ ET V +DI+ E KE
Sbjct: 411 GCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKE 470
Query: 700 EALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRF 759
+AL HSE+LA++ GL+ P A IRI+KNLR C DCHS K++SKI RE+++RD RF
Sbjct: 471 QALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARF 530
Query: 760 HHFKDGLCSCRDYW 773
HHF+ G CSC D+W
Sbjct: 531 HHFRGGACSCNDFW 544
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
ER+L+P V T+ ++ + ++ A VF M ERDL SW+ MI+G N L +A+
Sbjct: 101 ERVLAPTPV-TWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEAL 159
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVD 555
+F + G P+ + V SAC+ G + G +H K + ++VD
Sbjct: 160 CLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLG--TALVD 217
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G ++ ALE + + W ++N M+G
Sbjct: 218 MYAKCGAVELALEVFTGLRAR-NTCTWNAMINGLAMNG 254
>gi|302773103|ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
gi|300162480|gb|EFJ29093.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
Length = 331
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 205/335 (61%), Gaps = 19/335 (5%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA--GLKPDD 511
MY +C S+D+A VF +RD+ W++MI +A+NG GE ++ +F + K+A +P+
Sbjct: 1 MYGKCGSVDEARQVFEAFPDRDVALWNSMIAAYAQNGQGEMSLQVFERMKEATNNARPNA 60
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ V ACS + G +F SM +GI PS +HY ++D+LG +G LD+A +
Sbjct: 61 ITFVHVLCACSHARLIERGRSYFGSMETVFGIQPSSQHYRCMIDLLGRSGNLDQAWNILH 120
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA----- 626
MP+EPD W +++ CR H N+ELG+ CAE + +++P E S ++ N
Sbjct: 121 SMPLEPDSLAWTTMLSACRAHSNVELGELCAERLFEMEP----EYSAPYVLLSNIYAARD 176
Query: 627 --------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
+L +K KK + ++ +EV KVHE+ AGD +HP ++IY + L +QMK
Sbjct: 177 RWDDVARIRKLMADKGVKKPSGRSSIEVGDKVHEFVAGDRAHPRREEIYQELSRLGSQMK 236
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
GYI + L D ++E KE+ L HSE+LA++ G +++PAR + ++KNLRVC DCH+
Sbjct: 237 ALGYIQDRSSALRDGEEEEKEQMLWYHSEKLAIAFGSVATPARKSLYVIKNLRVCTDCHT 296
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
A K IS+I GRE+++RD RFHHF+DG CSC DYW
Sbjct: 297 ASKFISRITGREIVLRDPYRFHHFRDGWCSCGDYW 331
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 222/376 (59%), Gaps = 13/376 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ AC + L + + +H V + + ++ + ++ MYS ++D+ F
Sbjct: 294 DKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF 353
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ D+ W +MI + +G GE+A+++F Q + ++ ++ F+ + ACS G
Sbjct: 354 VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
+G +F+ M K Y + P ++HY +VD+LG G L+EA I MP++PD +W+ L+
Sbjct: 414 KGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKK 637
C++H E+ +R +E + +LDP L+ S L ++AS + +++ +K
Sbjct: 474 CKLHKEAEMAERISEEIIKLDP--LDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRK 531
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ LE+++ VH++ GD SHP+ +I ++ L +++K+ GY+PE VLHD+D E
Sbjct: 532 EPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEE 591
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE L HSE+ A++ L+++ PIR+MKNLRVC DCH+A+K IS+I RE+I+RDA
Sbjct: 592 KEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDAS 651
Query: 758 RFHHFKDGLCSCRDYW 773
RFHHFKDG CSC +YW
Sbjct: 652 RFHHFKDGECSCGNYW 667
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 11/226 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++ C ++L + VH + + L + + MY + S+ D + +M
Sbjct: 196 TLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSM 255
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
R + +W+T+I G A+NG E+ ++ ++ K AG +PD F+ V SACS L + +G
Sbjct: 256 PIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQ 315
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE-FIEKMPMEPDVDVWEKLMNLC 589
+H E + G + S++ M +G L+++++ F+++ DV +W ++
Sbjct: 316 QIHAEVIKA--GASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF--DVVLWSSMIAAY 371
Query: 590 RMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLVPVNASELAKEK 633
HG G+ E+ Q++ ++ NE + L+ + KEK
Sbjct: 372 GFHGR---GEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEK 414
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 37/243 (15%)
Query: 375 NNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE 434
++ +L++ L +G++K+A + I D FS L+Q+C +L K VH
Sbjct: 31 SSASLQEFTSLCNDGRIKQAYDTF----TSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHS 86
Query: 435 HV-------ERLLS-----------------------PLR-VSTYNGILKMYSECDSMDD 463
+ ++ +S P R V ++N ++ Y + ++
Sbjct: 87 LIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLES 146
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
A +F M+ER++ +W+ MI G + + A+ +F + G PD+ V C+
Sbjct: 147 AQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAG 206
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
L ++ G + K G S S+ M +G L + + I+ MP+ V W
Sbjct: 207 LRSLLAGQEVHACLLK-CGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRT-VVAWN 264
Query: 584 KLM 586
L+
Sbjct: 265 TLI 267
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 230/403 (57%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL + G +E +++ ++++ FS +++C A + H + ++
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+S N ++ MY++C +++A VF M D SW+ +I ++G G +AVD++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + G++PD + V +ACS G V +G +F+SM Y I P HY ++D+L +
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------S 611
G +A IE +P +P ++WE L++ CR+HGN+ELG A+ + L P S
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627
Query: 612 RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
++ + +L +++ KK + + +E+ ++VH + DTSHPE + +Y ++
Sbjct: 628 NMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQ 687
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEG-KEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +M+ GY+P+T FVLHD++ +G KE+ L HSE++AV+ GL+ P IRI KNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R CGDCH+ + +S +V R++I+RD KRFHHF++G CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G +EA+E++ + I +D T+ +++AC A L+ K VH +V R
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR- 315
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT------------------- 481
N ++ +Y +C D+A ++F M +DL SW+
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 482 ------------MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
MI+G A+NG GE+ + +FS K+ G +P D F G +C+ LG
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G + + K G S+ +++ M G ++EA + MP V W L+
Sbjct: 436 GQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAAL 493
Query: 590 RMHGN-LELGDRCAEIVEQ-LDPSR------LNEKSKAGLV 622
HG+ E D E++++ + P R L S AGLV
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)
Query: 446 STYNGILKMYSECDS----MDDAFSVFSNMTERDLTSWDTMITGFAKNG---LGE----- 493
S N ++ +YS+C S + A VF + E+D SW TM+TG+ KNG LGE
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 494 ------------------------DAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+A+++ + +G++ D+ + V AC+ G +
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 530 G-MLHFESMSK-DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G +H + + D+ S S+V + G DEA EKMP + D+ W L++
Sbjct: 305 GKQVHAYVLRREDF----SFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS 359
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
RD ++ MITGF+ N G A+++F + K G KPD+ F V + + + D + +
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 534 FESMSKDYG---IVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
F + + G I VS+ S+ L + + +E D W +M
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 591 MHGNLELGDRCAEIVEQLD 609
+G +LG+ E++E +D
Sbjct: 231 KNGYFDLGE---ELLEGMD 246
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 237/409 (57%), Gaps = 21/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G + AIEV ++ + D TF + AC A AL+ + V R++
Sbjct: 181 MISGYEQNGLAERAIEVYREMQVAQVVPDSATFVTTLSACAQAGALDLGREVER---RIV 237
Query: 441 SP-LRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
S + VS + G ++ MY+ C + A F + ER++ +W +MI G+ +G G +A+
Sbjct: 238 SDQMDVSVFLGSALVNMYARCGLVSKARDWFDRLQERNVVTWTSMIAGYGMHGHGCEAIK 297
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + G P+D F+ V +AC+ G V EG F+SM + YG+VP +HY S+VDM
Sbjct: 298 LFHLMRLEGPTPNDVTFVAVLAACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVDMY 357
Query: 558 GSTGYLDEALEFI-EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G G LD+A++FI + +P EP +VW ++ C+MH N LG AE + L+P N
Sbjct: 358 GRAGLLDDAMQFIRDSIPGEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPE--NPS 415
Query: 617 SKAGLVPVNA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ L + A + ++ KK +L+E+ H +R G+ SH +T +
Sbjct: 416 HRVLLSNIYALSGKMNHVEKVRNVMIKRRLKKQIGYSLIELGGTSHLFRMGEKSHQQTRE 475
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL-LSSPARAPI 724
IY + L ++ +AGY+PET VLH++++E +E AL HSE+LAV++GL +SS + PI
Sbjct: 476 IYQYLEELIHRISDAGYVPETDSVLHELEEEEREVALRYHSEKLAVAYGLMMSSGSTTPI 535
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++KNLR+CGDCH A+K +S + RE+I+RD RFHHFKDG CSC +YW
Sbjct: 536 RVIKNLRICGDCHLAIKFMSSVESREIIVRDKHRFHHFKDGKCSCLEYW 584
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
D AL AVH H L ++ +YS+C + A +F + +R + +W+
Sbjct: 121 DLSALRTGMAVHAHSVLLGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNA 180
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
MI+G+ +NGL E A++++ + + A + PD F+ SAC+ G + G + D
Sbjct: 181 MISGYEQNGLAERAIEVYREMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQ 240
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
V S+ ++V+M G + +A ++ +++ E +V W ++ MHG+
Sbjct: 241 MDV-SVFLGSALVNMYARCGLVSKARDWFDRL-QERNVVTWTSMIAGYGMHGH 291
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 229/394 (58%), Gaps = 20/394 (5%)
Query: 396 EVLGLLEKQ---CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EVL L+ K +S+D +FS+ + A LEE + +H +L +N
Sbjct: 638 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 697
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C + + + R L SW+ +I+ ++G E+ F + + G+KP
Sbjct: 698 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 757
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + +ACS G V +G+ +++ +++D+G+ P+++H + ++D+LG +G L EA FI K
Sbjct: 758 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 817
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MPM+P+ VW L+ C++HGNL+ G + AE + +L+P E ++ N
Sbjct: 818 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP----EDDSVYVLSSNMFATTGR 873
Query: 633 KEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
E+ K++ +N+ ++++ KV + GD +HP+T +IYA + ++ +KE
Sbjct: 874 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 933
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
+GY+ +T L D D+E KE L HSERLA+++ L+S+P + +RI KNLR+C DCHS
Sbjct: 934 SGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 993
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +S+++GR +++RD RFHHF+ GLCSC+DYW
Sbjct: 994 YKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+AVH + L L V N ++ MY++ + A +F M R+ SW+TM++G +
Sbjct: 92 RAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRV 151
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
GL + ++ F + G+KP + + +AC G + + G++ +
Sbjct: 152 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYV 211
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+I+ + G G + + + E+MP + +V W LM
Sbjct: 212 STAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLM 247
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 12/203 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++E+ + L+ + V+ T S L+ G + + +H V ++ V
Sbjct: 330 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 389
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L+MY+ +A VF M +DL SW++++ F +G DA+ + +G
Sbjct: 390 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449
Query: 509 PDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ F +AC G ++ G++ + + I ++ V M G G +
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL------VSMYGKIGEM 503
Query: 564 DEALEFIEKMPMEPDVDVWEKLM 586
E+ + +MP DV W L+
Sbjct: 504 SESRRVLLQMP-RRDVVAWNALI 525
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 366 FAEASRSSQNNGTLEQLD------------GLVKEGKVKEAIEVLGLLEKQCISVDLPTF 413
+A A RS + N +Q+ V +G+ +A+ +L + SV+ TF
Sbjct: 396 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNM 471
+ + AC E+ + +H V ++S L + N ++ MY + M ++ V M
Sbjct: 456 TSALAACFTPDFFEKGRILHGLV--VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 513
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
RD+ +W+ +I G+A++ + A+ F + G+ + + V SAC GD++E
Sbjct: 514 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 571
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQAC---GDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A+ + + +S + T ++ AC GD LE K +H ++ N
Sbjct: 536 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKN 593
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C + + +F+ + R++ +W+ M+ A +G GE+ + + S+ + G+
Sbjct: 594 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 653
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F SA + L + EG ++ G + + DM G + E ++
Sbjct: 654 DQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 712
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
+ + + W L++ HG E + CA E L+
Sbjct: 713 LPP-SVNRSLPSWNILISALGRHGYFE--EVCATFHEMLE 749
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTF--SQLMQACGDAKAL-EEAKAVHEHV 436
+ G+V+ G E +E K C + + +F + L+ ACG + ++ E VH V
Sbjct: 144 MMSGIVRVGLYLEGME---FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200
Query: 437 ER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
+ LLS + VST IL +Y + + VF M +R++ SW +++ G++ G E+
Sbjct: 201 AKSGLLSDVYVST--AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 258
Query: 495 AVDIFS----------QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
+DI+ Q ++GL+ + + S ++G+V F+ MS+ I
Sbjct: 259 VIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI- 317
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ SI G+++E+ M
Sbjct: 318 ----SWNSIAAAYAQNGHIEESFRIFSLM 342
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+++ N ++ M ++D A +F M+ERD SW+++ +A+NG E++ IFS +
Sbjct: 284 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 343
Query: 504 Q 504
+
Sbjct: 344 R 344
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 223/384 (58%), Gaps = 9/384 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G++++A+++ L + + D T L+ AC AL + +A+H +E+ +
Sbjct: 339 MITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI 398
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ MY +C +D+A +VF M ERD+ +W MI G A NG+G DA++ F
Sbjct: 399 VEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFC 458
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q K+ G +P +I V +ACS + EG HF M + + P ++HY ++D+L +
Sbjct: 459 QMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARS 518
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G LDEA+ ++ MPM+P+ +W +++ CR+H N++L AE + +L P
Sbjct: 519 GLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLY 578
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ S+ + L +E+ KK A + + V +VH++ D SHP T +I ++
Sbjct: 579 NIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMME 638
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
+ ++K AGY P T + D+D+E KE+ALLAHSE++A++ GL+S P PI IMKNLR
Sbjct: 639 EIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLR 698
Query: 732 VCGDCHSALKIISKIVGRELIIRD 755
VC DCHSA+K+IS++ RE+I+RD
Sbjct: 699 VCEDCHSAIKLISQLWNREIIVRD 722
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + CGD + +A+AV + V R P +N I+ Y + +D A S+F M
Sbjct: 275 TLIDMYAKCGD---IAQAQAVFDAVGRGQKP---EPWNVIIDGYCKLGHVDIARSLFDQM 328
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
RD+ ++++MITG+ +G DA+ +F Q ++ G++ D+ + + +AC++LG + +G
Sbjct: 329 GARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGR 388
Query: 531 MLHFESMSKDYGIVPSMKHYVS-IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
LH S + IV + V+ +VDM G +DEA +M E DV W ++
Sbjct: 389 ALH---ASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMG-ERDVHTWSAMI 441
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D+A + ER++ SW ++I G+++ G DAV F+ G++PD+ IG SA
Sbjct: 185 LDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSA 244
Query: 521 CSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
CS L ++ G +LH K + K V+++DM G + +A
Sbjct: 245 CSKLKNLEFGRLLHLLVGKKRIQMTD--KLVVTLIDMYAKCGDIAQA 289
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 230/406 (56%), Gaps = 19/406 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + K EA+ + +E + + + AC +E + +H +++
Sbjct: 178 ISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERF 237
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ MY++C +D A+ VF +M+ R D+ +W+TMI FA +G G A+++F
Sbjct: 238 DMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFE 297
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ Q+G+ PDD ++ V AC+ G V EG F SM ++ G+ P++KHY S+VD+LG
Sbjct: 298 KMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRA 356
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD------------RCAEIVEQL 608
G L EA + + MP PD+ +W+ L+ R H N+E+ + C + V
Sbjct: 357 GRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLS 416
Query: 609 DPSRLNEK-SKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ E+ + G V E K ++ KK+ + +E +H++ D SH +IY
Sbjct: 417 NVYAARERWADVGRV----REAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIY 472
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + +R ++KE GY+ ET FVLHDI +E KE L HSE+LAV+ GL+S+ PI+++
Sbjct: 473 AKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVI 532
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+CGDCH +K+ISKI RE+I+RD RFH FK+G CSCRDYW
Sbjct: 533 KNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 28/231 (12%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAF 465
VD T S +++AC A E+ +H H+ R ++ + T +L +Y++ +D A
Sbjct: 103 VDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGT--TLLDVYAKVGEIDSAE 160
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M +RD+ SW+ +I+GFA+ +A+ +F + + G KP++ +G SAC+ LG
Sbjct: 161 KVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLG 220
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVS------IVDMLGSTGYLDEALEFIEKMPMEPDV 579
D EG K +G + + ++ ++DM G++D+A E M D+
Sbjct: 221 DFKEG-------EKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDI 273
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
W ++ MHG G + E+ E++D S G+ P + S LA
Sbjct: 274 VTWNTMIMAFAMHGE---GCKALELFEKMDQS--------GVSPDDVSYLA 313
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 225/399 (56%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G+ EA+++ ++ + I + T ++ A + AL ++ H R +
Sbjct: 268 VQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDI 327
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ ++ MY++C + DA +F M R++ SW+ MI G+A +G E+AV +F + +
Sbjct: 328 YVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSS 387
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
KPD F V ACS G EG +F M +GI P M+HY +V +LG G LD+
Sbjct: 388 KEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDD 447
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I +MP EPD +W L+ CR+HGN+ L + AE + QL+P N + L +
Sbjct: 448 AYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPE--NAGNYVLLSNIY 505
Query: 626 AS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
AS ++ K KK + +E+++KVH AGD+SHP I ++ L
Sbjct: 506 ASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLT 565
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M+ G+ P T +VLHD++++ K++ L HSE+LAV+ GL+S+ P++++KNLR+CG
Sbjct: 566 MEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICG 625
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH A+K IS RE+ +RD RFHHFKDG CSC DYW
Sbjct: 626 DCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 37/250 (14%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G+ ++A+ L + + D S + A GD + + +H +V +
Sbjct: 128 VSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGC 187
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L ++ MY +C D+ VF + D+ S + ++ G ++N +A+ +F +
Sbjct: 188 RLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFRE 247
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP---------------- 545
F G++ + + + + C G +E + F M + GI P
Sbjct: 248 FVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVTIPCVLPAFANIA 306
Query: 546 SMKH-----------------YV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ H YV ++VDM G + +A E MP +V W ++
Sbjct: 307 ALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMI 365
Query: 587 NLCRMHGNLE 596
MHG E
Sbjct: 366 GGYAMHGEAE 375
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 214/375 (57%), Gaps = 16/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVE--RLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
++ AC AL++ K +H +++ R+L +ST ++ MY++C +D A VF
Sbjct: 292 VLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIST--ALIDMYAKCGRIDCARRVFD 349
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ +RDL +W +MI+G + +GLG + + FS+ G KPDD +GV + CS G V E
Sbjct: 350 GLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE 409
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G+ F M +GIVP ++HY ++D+LG G L+ A E I+ MPMEPDV W L++ C
Sbjct: 410 GLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSAC 469
Query: 590 RMHGNLELGDRCAEIVEQLDP----------SRLNEKSKAGLVPVNASELAKEKENKKLA 639
R+HG+++LG+R + +L P S L + ++ ++
Sbjct: 470 RIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCP 529
Query: 640 SQNLLEVRSKVHEYRAGDTSHPETDKI-YALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ VHE+ A D HP +I L LR E GY+P T+ VL D+++E K
Sbjct: 530 GCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDK 589
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E+A+ HSE+LAV+ GLLS+ IRI KNLR C DCHSA+K IS + RE+++RD R
Sbjct: 590 EQAVSWHSEKLAVAFGLLST-QEGTIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSR 648
Query: 759 FHHFKDGLCSCRDYW 773
FH F+ G CSC DYW
Sbjct: 649 FHTFRYGNCSCTDYW 663
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 38/228 (16%)
Query: 407 SVDLPTFSQLMQACGDAKALE-EAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
S D TF+ + AC L + VH V + + N ++ MYS M DA
Sbjct: 153 SADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAK 212
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK----------QAG--------- 506
VF M +RD+ +W +++ G+A G A ++F AG
Sbjct: 213 RVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNE 272
Query: 507 -------------LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSI 553
+KP++ + + + SAC+ LG + +G + K+ I+ S ++
Sbjct: 273 ALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNR-ILLSSNISTAL 331
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRC 601
+DM G +D A + + + D+ W +++ MHG LG C
Sbjct: 332 IDMYAKCGRIDCARRVFDGL-HKRDLLTWTSMISGLSMHG---LGAEC 375
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 236/432 (54%), Gaps = 22/432 (5%)
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQ 415
++N K D E S + N+ + G + G KEAI + +++ + D TF
Sbjct: 162 LINARKVFDKIRERSIVAWNS----MISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVS 217
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
++ AC A VHE++ L V ++ MY C ++ A VF +M ER+
Sbjct: 218 VLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERN 277
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ +W MI+G+ NG G AV++F + ++ GL P+ F+ V SAC+ G V EG F
Sbjct: 278 VVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFA 337
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI-EKMPMEPDVDVWEKLMNLCRMHGN 594
S+ ++Y +VP ++H V +VDMLG G LDEA FI E++P P + ++ C+MH N
Sbjct: 338 SIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKN 397
Query: 595 LELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL---------- 644
+LG + AE + +P E ++ N LA + ++ N++
Sbjct: 398 FDLGAQVAEHLLAAEP----ENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGY 453
Query: 645 ---EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
EV K + + GD SH ET+ IY + L + EAGY+P + V+H++++E +E A
Sbjct: 454 STVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYA 513
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA++ GLL + PIRI+KNLR+C DCHSA+K IS I RE+I+RD RFHH
Sbjct: 514 LRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHH 573
Query: 762 FKDGLCSCRDYW 773
FK G CSC DYW
Sbjct: 574 FKVGSCSCLDYW 585
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++++C D AL+ + VH HV L V ++ +Y +C + +A VF +
Sbjct: 113 TFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKI 172
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
ER + +W++MI+G+ +NG ++A+ +F + K+ G++PD F+ V SAC+ LG G
Sbjct: 173 RERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGC 232
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
E + + G+ ++ S+++M G + +A E + M E +V W +++
Sbjct: 233 WVHEYIVGN-GLDLNVVLGTSLINMYIRCGNVSKAREVFDSMK-ERNVVAWTAMIS 286
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 212/368 (57%), Gaps = 13/368 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T ++ AC ALE+ K VH +++R + V ++ MY +C ++ A VF
Sbjct: 507 DETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M E+ +++W+ +I G A NGL E ++D+FS K+ + P++ F+GV AC +G V
Sbjct: 567 YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVD 626
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG HF SM D+ I P++KHY +VD+LG G L EA E + +MPM PDV W L+
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKEKENKK 637
C+ HG+ E+G R + +L P ++ L + AS+ + + K
Sbjct: 687 CKKHGDSEMGRRVGRKLIELQPD--HDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 744
Query: 638 LASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
+ +++E +HE+ AGD +HP+ D I ++ + ++K GY P+ VL D+D+E
Sbjct: 745 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEE 804
Query: 698 KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAK 757
KE L HSE+LA++ GL++ PIRIMKNLR+C DCH+A K+ISK R++++RD
Sbjct: 805 KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRH 864
Query: 758 RFHHFKDG 765
RFHHF+ G
Sbjct: 865 RFHHFEQG 872
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 325 DQSRRQYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDG 384
++++ Y Q P S S + GM V+ CK D+ E ++ T L
Sbjct: 296 EEAKHIYHQMPERSIIASNSMIVLFGM-RGLVVEACKLFDEMLE-----KDMVTWSALIA 349
Query: 385 LVKEGKV-KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
++ ++ +EAI + K + VD + AC + + K +H ++ +
Sbjct: 350 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 409
Query: 444 RVSTYNGILKMYSEC-------------------------------DSMDDAFSVFSNMT 472
++ N ++ MYS+C + +D+A ++F +M
Sbjct: 410 YINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 469
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
E+D+ SW +MI+G+A+N L ++ + +F + + +G KPD+ + V SAC+ L + +G
Sbjct: 470 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 529
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMH 592
+ K G+ ++ +++DM G ++ ALE M +E + W L+ M+
Sbjct: 530 -VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMN 587
Query: 593 GNLE 596
G +E
Sbjct: 588 GLVE 591
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ L+QAC ++ EAK VH HV +L V N ++ +S C +M DA VF+
Sbjct: 215 TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 274
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI------GVFSACSALG 525
+ D SW++++ G+ + G E+A I+ Q + + + + + V AC
Sbjct: 275 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFD 334
Query: 526 DVVE 529
+++E
Sbjct: 335 EMLE 338
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 426 LEEAKAV-HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
+EEAK + H+ ER + N ++ ++ + +A +F M E+D+ +W +I
Sbjct: 295 VEEAKHIYHQMPER-----SIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 349
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
F +N + E+A+ F + G+ D+ + + SAC+ L V G L S+S G
Sbjct: 350 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKL-IHSLSLKIG 406
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 228/397 (57%), Gaps = 39/397 (9%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLS----PLRVSTYNG------------IL 452
D +++ ++ C + EEA AV E L S P RV+ + G ++
Sbjct: 174 DTVSWNTIIAWCVENGEYEEAIAVFR--EMLASMECLPDRVTLFPGKGIEVEERLSSALI 231
Query: 453 KMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
MYS+C ++ A VF N+ + ++ +W+ M+ GF NG E A+++F++ + GL P+
Sbjct: 232 NMYSKCACIEGAVHVFENLGAQMNVDTWNAMLAGFTANGCSEKALELFARMEITGLVPNK 291
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F V +ACS G V EGM FE M+K YGI P + HY +VD+ G D+A + I+
Sbjct: 292 ITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCMVDLFCRAGLFDKAEKMIQ 351
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN------ 625
MPM+PD VW+ L+ C+ H N ELG + ++ + P+ AG V ++
Sbjct: 352 MMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPN-----DHAGYVLLSNIYALD 406
Query: 626 --------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQM 677
+L ++ +K+ + +E+ +HE+ +GD SH + IY ++ + Q+
Sbjct: 407 GNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEMLSEMCQQL 466
Query: 678 KEAGYIPETRFVLHDIDQEG-KEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
K AGY+P+T VL DID E KE +L HSE+LA++ GL+S+ PIRI KNLRVCGDC
Sbjct: 467 KVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLRVCGDC 526
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+A+K++SKI GR +I+RDA RFHHF++G CSC D+W
Sbjct: 527 HNAVKLLSKIYGRCIIVRDANRFHHFREGSCSCGDFW 563
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 238/403 (59%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + EA+ + ++ + + + T ++ +C +L+ K +H++ ++
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V ++ M+++C S+DDA S+F M +D +W MI +A +G E ++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD+ F+G+ +ACS G V EG +F M +GIVPS+KHY S+VD+L
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXA 380
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------- 612
G L++A EFI+K+P+ P +W L+ C H NL+L ++ +E + +LD S
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 613 -LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
L ++K + ++ K+++ K+ + +EV + VHE+ +GD T K++ +
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500
Query: 672 GLRAQMKEAGYIPETRFVLH-DIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++K +GY+P+T V+H +++ + KE L HSE+LA++ GLL++P IR++KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K+IS I GR+++ RD +RFHHF+DG CSC D+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++AC AKALEE + +H +L V ++ MY+EC+ +D A VF +
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRI 190
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E + ++ MITG+A+ +A+ +F + + LKP++ + V S+C+ LG + G
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+K + +K +++DM G LD+A+ EKM + D W ++
Sbjct: 251 W-IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYAN 308
Query: 592 HGNLE 596
HG E
Sbjct: 309 HGKAE 313
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 232/399 (58%), Gaps = 17/399 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+DG ++ + KE + + ++ + D T ++ AC ALE + ++++
Sbjct: 343 MIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDK-- 400
Query: 441 SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ ++ T+ N ++ MY +C +++ A +F+ M ++D +W MI G A NG GE+A+ +
Sbjct: 401 NKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTM 460
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS +A + PD+ +IGV AC+ +G V +G F +M+ +GI P++ HY +VD+LG
Sbjct: 461 FSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLG 520
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G+L EALE I MP++P+ VW L+ CR+H N++L + A + +L+P N
Sbjct: 521 RAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPE--NGAVY 578
Query: 619 AGLVPV-----------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
L + N ++ E+ KK+ +L+E+ V+E+ AGD SHP++ +IY
Sbjct: 579 VLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIY 638
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
A + ++ + AGY P+T V D+ +E KE AL HSE+LA+++ L+SS IRI+
Sbjct: 639 AKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIV 698
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGL 766
KNLR+C DCH ++SK+ RELI+RD RFHHF+ GL
Sbjct: 699 KNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 32/154 (20%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVSTYNGILKMYSECDSMD 462
+C+S + T ++ AC K L K ++ ++++ + + N ++ M++ C MD
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMD 292
Query: 463 DAFSVFSNMTERDLTSWDTMITGFA-------------------------------KNGL 491
A VF M RD+ SW +++TGFA +
Sbjct: 293 AARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNR 352
Query: 492 GEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
++ + +F + + +KPD+ + + +AC+ LG
Sbjct: 353 FKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLG 386
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 217/390 (55%), Gaps = 55/390 (14%)
Query: 433 HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLG 492
H ++ P V+ N ++ MY++ D AF VF MT++D+ SW +++TG NG
Sbjct: 336 HMKIDEFTYPSLVN--NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY 393
Query: 493 EDAVDIFSQFKQAGLKPDDQIFIGVFSA-----------CSAL------------GDVV- 528
E+A+ +F + + G+ PD + V SA C + DV+
Sbjct: 394 EEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVIT 453
Query: 529 ------------EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
G +F+SM + YGI P +HY ++D+LG +G L EA E + +M ++
Sbjct: 454 WTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 513
Query: 577 PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVPVNASEL 629
PD VW+ L+ CR+HGN+ELG+R A + +L+P N S AG E
Sbjct: 514 PDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAG----KWEEA 569
Query: 630 AKEKENKKL------ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
AK + KL + +E+ SKVH + + D SHP T +IY+ + + +KEAGY+
Sbjct: 570 AKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYV 629
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+ F LHD+D+EGKE L HSE+LAV+ GLL+ P APIRI KNLR+CGDCH+A+K +
Sbjct: 630 PDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYV 689
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S + R +I+RD+ FHHF++G CSC DYW
Sbjct: 690 SGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 144/388 (37%), Gaps = 69/388 (17%)
Query: 269 NSQRFSESLGSFNGNCMQDTGQHQQALSGHYSGNFGIHQNSPSFYQQDQNGG----QYQW 324
NS R +E+ F ++ +SG+ +G + + + Q G Q+ W
Sbjct: 84 NSGRLNEARKLFYETPIRSCITWSSLISGY--CRYGCDVEALELFWEMQYEGERPNQFTW 141
Query: 325 DQSRR------------QYQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRS 372
R Q + + Q+ S + + G++ C E ++
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDS-NAFVVTGLVDMYAKCKCILEAEYLFELAP 200
Query: 373 SQNNGTL--EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAK 430
+ N L + G + G +AIE + + I + TF ++ ACG A
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260
Query: 431 AVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
VH + R V + ++ MYS+C + +A + M D SW++MI G + G
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHY 550
LGE+A+ +F ++H M D PS+ +
Sbjct: 321 LGEEALSLFR------------------------------IMHLRHMKIDEFTYPSLVNN 350
Query: 551 VSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR---------- 600
++VDM GY D A + EKM + DV W L+ C +G+ E R
Sbjct: 351 -ALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGI 408
Query: 601 ------CAEIVEQLDPSRLNEKSKAGLV 622
A ++ LD S ++ +K G +
Sbjct: 409 HPDQIVIAAVLSALDNSLVSMYAKCGCI 436
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N +L S+C +DDA +F M +RD SW+TMI +A +G +A +F +
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYE 97
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
++N ++ Y+ +++A +F R +W ++I+G+ + G +A+++F + + G
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVS-IVDMLGSTGYLD 564
+P+ + V CS + +G +H ++ + S V+ +VDM +
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQF---DSNAFVVTGLVDMYAKCKCIL 190
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
EA E P + + +W ++
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVT 213
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 235/402 (58%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EA+++ + + +D TFS +++ C ++ AK VH + R
Sbjct: 306 IAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGF 365
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L V ++ YS+ +DDA VF M+ R++ SW+ +I G+ +G GE+A+D+F +
Sbjct: 366 GLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEK 425
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+ P+ F+ V SACS G G F+SM++D+ + P H+ ++++LG G
Sbjct: 426 MLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREG 485
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LN 614
LDEA I K P +P ++W L+ CR+HGNLELG AE + ++P + LN
Sbjct: 486 LLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLN 545
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +G + + + K K + L + + +EV ++ H + +GD H + +K+ +
Sbjct: 546 IYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDE 605
Query: 673 LRAQMKEAGYIPETR-FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L + + GY+PE + F+L D+D E +E+ + HSE+LA+++GLL++ + P++I+++ R
Sbjct: 606 LMLNISKLGYVPEEQNFMLPDVD-ENEEKIRMYHSEKLAIAYGLLNTLEKTPLQIVQSHR 664
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCHS +K+I+ I RE++IRDA RFHHF+DG CSC DYW
Sbjct: 665 ICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 117/242 (48%), Gaps = 12/242 (4%)
Query: 346 NIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
+++ GMM ++ C+ D+ +R++ + GT+ + G V G EA + L+ ++
Sbjct: 177 HVKCGMM----IDACRLFDEMP--ARNAVSWGTI--ISGYVDSGNYVEAFRLFILMREEF 228
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
TF+ +++A + + + +H + + ++ MYS+C S++DA
Sbjct: 229 YDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAH 288
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF M ++ + W+++I G+A +G E+A+D++ + + +G+K D F + CS L
Sbjct: 289 CVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLA 348
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
V +H + +G+ + ++VD G +D+A ++M ++ W
Sbjct: 349 SVARAKQVHASLVRNGFGL--DVVANTALVDFYSKWGKVDDARHVFDRMSCR-NIISWNA 405
Query: 585 LM 586
L+
Sbjct: 406 LI 407
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 361 KHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQA 419
+ E E + G Q++ LV K ++A+E+ + E + V T+ L+ A
Sbjct: 82 RKETPLKETHVKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINA 141
Query: 420 CGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
C K++ K + + V+ P + N +L M+ +C M DA +F M R+ S
Sbjct: 142 CIGLKSIRGVKRLCNYMVDNGFEPDQYMR-NRVLLMHVKCGMMIDACRLFDEMPARNAVS 200
Query: 479 WDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMS 538
W T+I+G+ +G +A +F ++ + F + A + L + G S +
Sbjct: 201 WGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGR-QLHSCA 259
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G+ + +++DM G L++A ++MP + + W ++ +HG
Sbjct: 260 IKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMP-DKTIVGWNSIIAGYALHG 313
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 243/438 (55%), Gaps = 24/438 (5%)
Query: 345 GNIQNGMMASQVLNNCKHE--DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLE 402
GN M A NC H D S N + G + G EAI+ ++E
Sbjct: 362 GNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNT----LVTGYTQNGLASEAIDAYNMME 417
Query: 403 KQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+C +P T+ ++ A AL++ +H + + L V ++ +Y +C
Sbjct: 418 -ECRDT-IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
++DA S+F + W+ +I +G GE+A+ +F +K D F+ + S
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
ACS G V EG F+ M K+YGI PS+KHY +VD+LG GYL++A E + MP++PD
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-----------NEKSKAGLVPVNASE 628
+W L++ C+++GN ELG ++ + ++D + N + G++ V +
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRS-- 653
Query: 629 LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF 688
LA+++ +K + + V SK + G+ +HP+ +IY ++ L A+MK GY+P+ F
Sbjct: 654 LARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSF 713
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
V DI+++ KE+ L +HSERLA++ G++S+P R+PIRI KNLRVCGDCH+A K IS+I
Sbjct: 714 VYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISE 773
Query: 749 RELIIRDAKRFHHFKDGL 766
RE+++RD+ RFHHFKDG+
Sbjct: 774 REIVVRDSNRFHHFKDGI 791
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G A+ VL ++ + + +D T + ++ C + + +H HV +
Sbjct: 193 MISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHG 252
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S + VS N ++ MYS+ + DA VF M RDL SW+++I + +N A+
Sbjct: 253 LDSDVFVS--NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGD--VVEGMLHF----ESMSKDYGIVPSMKHYVS 552
F + G++PD + + S S L D + +L F E + KD I ++
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNAL----- 365
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V+M GY++ A +++P + D W L+
Sbjct: 366 -VNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVT 398
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC----ISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
+ V+ GK EA+ + L C + D TF +++AC +L + K VH V
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVF 148
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
++ V ++ +YS +D A VF +M +D+ SW+ MI+GF +NG A+
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML-HFESMSKDYGIVPSMKHYVSIVDM 556
+ ++ K G+K D + C+ DV+ G+L H + +G+ + ++++M
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNALINM 266
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G L +A ++M + D+ W ++
Sbjct: 267 YSKFGRLQDAQMVFDQMEVR-DLVSWNSII 295
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 222/390 (56%), Gaps = 9/390 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G+ +EA V ++ + D T L+ AC AL+ + H V
Sbjct: 298 VSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
S N ++ MY++C +D + VF+ M RD+ SW+TMI G+ +GLG++A +F +
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G PD FI + SACS G V+EG F M YG+ P M+HY+ +VD+L G
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
+LDEA EFI+ MP+ DV VW L+ CR++ N++LG + + ++++L P N
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
S AG + K + KK + +E+ +H + GD SHP++ +IY +
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +K+ GY P+T FVL D+++E KE+AL+ HSE+LA+++G+LS I + KNLRV
Sbjct: 598 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 657
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHF 762
CGDCH+ +K IS + R +I+RDA RFHHF
Sbjct: 658 CGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPT-FSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V ++ +A + + Q + PT + ++AC L + +H + +
Sbjct: 196 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 255
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
++ N +L MY++ +D A ++F M +D S+ +++G+ +NG E+A +F
Sbjct: 256 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 315
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + ++PD + + ACS L + G S+ G+ +++DM
Sbjct: 316 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKC 374
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D + + MP D+ W ++ +HG
Sbjct: 375 GRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIHG 406
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF ++AC +A+H H L + L VST +L MY +C + DA +F+
Sbjct: 12 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVST--ALLDMYVKCACLPDAAHIFA 69
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVD--IFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M RDL +W+ M+ G+A +G+ AV + Q + L+P+ + + + G +
Sbjct: 70 TMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGAL 129
Query: 528 VEGM----------LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
+G LH SK + + +++DM G L A + MP
Sbjct: 130 AQGTSVHAYCIRACLHPNRNSKS-KLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188
Query: 578 DVDVWEKLM 586
+V W L+
Sbjct: 189 EVT-WSALI 196
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 12/179 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER-LLSPLR---------VSTYNGILKMYSECDSM 461
T L+ AL + +VH + R L P R V +L MY++C S+
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG-VFSA 520
A VF M R+ +W +I GF A +F GL I A
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C++L + G ++ G+ + S++ M G +D+A+ ++M ++ V
Sbjct: 235 CASLDHLRMGE-QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 230/398 (57%), Gaps = 22/398 (5%)
Query: 396 EVLGLLEKQC---ISVDLPTFSQLMQACGDAKALEEAKAVHE--HVERLLSPLRVSTYNG 450
E L + E+ C I D+ + ++ AC + L++AK VH HV L S L ++ N
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN--NA 384
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ MY++C +D VF M R++ SW +MI + +G DA+ +F++ KQ ++P+
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ F+GV CS G V EG F SM+ +Y I P ++HY +VD+ G L EALE I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGL 621
E MP+ +V +W LM+ CR+HG LELG A+ + +L+P S + + +
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
N + +EK K + ++ K HE+ GD H ++++IYA + + +++K AG
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR------APIRIMKNLRVCGD 735
Y+P+ VL D+++E K++ +L HSE+LA+ GL++ IRI+KNLRVC D
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH K++SK+ RE+I+RD RFH +K+GLCSCRDYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D +F +++A AL E +H ++ + G + MY+ C ++ A +V
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
F M+ RD+ +W+TMI + + GL ++A +F + K + + PD+ I + SAC G++
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
+E + ++ + ++V M G +D A EF KM +
Sbjct: 229 RYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L VST ++ YS+C +DDA +F ++DL W TMI+ + ++ ++A+ +F +
Sbjct: 278 LFVST--AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 503 KQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+G+KPD V SAC+ LG + V +H + + I ++ ++M
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL------INMY 389
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G LD + EKMP +V W ++N MHG
Sbjct: 390 AKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHG 424
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 232/398 (58%), Gaps = 11/398 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G + +++ + + +S D TF+ +++A + ++ K +H V R + V
Sbjct: 419 VQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRS-GFMNV 477
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ +L MY+ C S+ DA F M+ER++ +W+ +++ +A+NG G+ + F + +
Sbjct: 478 YSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMS 537
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G +PD F+ + +ACS V EG+ +F MS Y + P +HY ++VD L +G DE
Sbjct: 538 GYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDE 597
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA------EIVEQLDP--SRLNEKS 617
A + + +MP EPD VW ++N CR+H N L + A +++ P + N +
Sbjct: 598 AEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFA 657
Query: 618 KAGL--VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
+AG V + +++ +KL + + +E++ KVH + A D HP+ +I I L
Sbjct: 658 EAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAE 717
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
QM++ GY P+ ++D+E K ++L HSERLA++ L+++P +PI +MKNLR C D
Sbjct: 718 QMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTD 777
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CH+A+K+ISKIVGRE+ +RD+ RFHHF+DG CSC DYW
Sbjct: 778 CHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 15/213 (7%)
Query: 323 QWDQSRRQYQQNPNEGQYQS---YSGNIQNG--MMASQVLNNCKHEDDFAEASRSSQNNG 377
Q Q+R+ Q PN + SG +++G +A ++ ++ A +
Sbjct: 58 QLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTT------- 110
Query: 378 TLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE 437
+ K + +A ++ + + D T+ L+ C D + +E H +
Sbjct: 111 ---MIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIV 167
Query: 438 RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
+L L N +L Y + +D A +F M D S++ MITG+A NGL E+A++
Sbjct: 168 KLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIE 227
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+F + + G KP D F V SA L D G
Sbjct: 228 LFVEMQNLGFKPSDFTFAAVISASVGLDDTAFG 260
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
GKVKE+I++ L+ F ++ + L+ + +H V ++
Sbjct: 321 GKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVS 380
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY++C ++A +F ++ R W MI+ + GL E+ + +F + ++A +
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
D F V A + L ++ G LH + + V S +++DM + + +A+
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSG---CALLDMYANCASIKDAI 497
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+ E+M E +V W L++
Sbjct: 498 KTFEEMS-ERNVVTWNALLS 516
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
I+ Y + ++ A +F + ER + +W TMI ++K+ DA +F++ ++G +PD
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALE 568
+I + + C+ L +V + + +++ ++ + + H V +++D TG LD A
Sbjct: 140 YVTYITLLTGCNDL-EVAKEL--YQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARR 196
Query: 569 FIEKM 573
+M
Sbjct: 197 LFLEM 201
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 229/394 (58%), Gaps = 20/394 (5%)
Query: 396 EVLGLLEKQ---CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EVL L+ K +S+D +FS+ + A LEE + +H +L +N
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C + + + R L SW+ +I+ ++G E+ F + + G+KP
Sbjct: 608 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 667
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + +ACS G V +G+ +++ +++D+G+ P+++H + ++D+LG +G L EA FI K
Sbjct: 668 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 727
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MPM+P+ VW L+ C++HGNL+ G + AE + +L+P E ++ N
Sbjct: 728 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP----EDDSVYVLSSNMFATTGR 783
Query: 633 KEN-----KKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
E+ K++ +N+ ++++ KV + GD +HP+T +IYA + ++ +KE
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
+GY+ +T L D D+E KE L HSERLA+++ L+S+P + +RI KNLR+C DCHS
Sbjct: 844 SGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 903
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K +S+++GR +++RD RFHHF+ GLCSC+DYW
Sbjct: 904 YKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTF--SQLMQACGDAKAL-EEAKAVHEHV 436
+ G+V+ G E +E K C + + +F + L+ ACG + ++ E VH V
Sbjct: 29 MMSGIVRVGLYLEGME---FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 437 ER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
+ LLS + VST IL +Y + + VF M +R++ SW +++ G++ G E+
Sbjct: 86 AKSGLLSDVYVST--AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+DI+ + G+ ++ V S+C L D G + K G+ + S++
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLAVENSLI 202
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
MLGS G +D A ++M E D W + +G++E
Sbjct: 203 SMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 243
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 12/203 (5%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++E+ + L+ + V+ T S L+ G + + +H V ++ V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L+MY+ +A VF M +DL SW++++ F +G DA+ + +G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 509 PDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ F +AC G ++ G++ + + I ++ V M G G +
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL------VSMYGKIGEM 413
Query: 564 DEALEFIEKMPMEPDVDVWEKLM 586
E+ + +MP DV W L+
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALI 435
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 366 FAEASRSSQNNGTLEQLD------------GLVKEGKVKEAIEVLGLLEKQCISVDLPTF 413
+A A RS + N +Q+ V +G+ +A+ +L + SV+ TF
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNM 471
+ + AC E+ + +H V ++S L + N ++ MY + M ++ V M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLV--VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
RD+ +W+ +I G+A++ + A+ F + G+ + + V SAC GD++E
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY++ + A +F M R+ SW+TM++G + GL + ++ F + G+KP +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
+ +AC G + + G++ + +I+ + G G + + + E+M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 574 PMEPDVDVWEKLM 586
P + +V W LM
Sbjct: 121 P-DRNVVSWTSLM 132
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 9/220 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQAC---GDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A+ + + +S + T ++ AC GD LE K +H ++ N
Sbjct: 446 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKN 503
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY++C + + +F+ + R++ +W+ M+ A +G GE+ + + S+ + G+
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 563
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D F SA + L + EG ++ G + + DM G + E ++
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQ-QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
+ + + W L++ HG E + CA E L+
Sbjct: 623 LPP-SVNRSLPSWNILISALGRHGYFE--EVCATFHEMLE 659
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 61/121 (50%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +G+ +E I++ + + + + + S ++ +CG K + + V +
Sbjct: 134 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+++ N ++ M ++D A +F M+ERD SW+++ +A+NG E++ IFS +
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 504 Q 504
+
Sbjct: 254 R 254
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 228/403 (56%), Gaps = 20/403 (4%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G EA+ V L+++ + D T ++ A AL + K +H + R L
Sbjct: 390 VHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEG 449
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
ST N ++ MY+ C S+++A+ VF + L W TMI + +G G+ AV++FS +
Sbjct: 450 STVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ 509
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
L PD F+ + ACS G + EG E+M Y + P +HY +VD+LG +L+E
Sbjct: 510 KLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEE 569
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A F++ M +EP +VW + CR+H N +LG+ A+ + LDP S V ++
Sbjct: 570 AYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPD-----SPGSYVLIS 624
Query: 626 ----ASELAKEKENKKLASQ----------NLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
AS K+ E ++ + + +EV +KVH + D SHPE+ KIY +
Sbjct: 625 NVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLA 684
Query: 672 GLRAQM-KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++ KE GY+P+T+ VLH++ +E K + L HSERLA+++GL+S+ PIRI KNL
Sbjct: 685 QITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNL 744
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+ K++SK RELI+RDA RFHHF+DG+CSC D+W
Sbjct: 745 RVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGI 451
EA+++L ++ + + VD + AC + L AK VH + ++R LS L + N I
Sbjct: 297 EALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQ--NMI 354
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y++C +++ A +F ++ +D+ SW +MI+ + NGL +A+ +F K+ ++PD
Sbjct: 355 IDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDS 414
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE-F 569
+ + SA ++L + +G +H K + + S + S+VDM G L+ A + F
Sbjct: 415 ITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVN--SLVDMYACCGSLENAYKVF 472
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL 613
I + +W ++N MHG G E+ ++ +L
Sbjct: 473 I--CTRSKSLVLWTTMINAYGMHGR---GKAAVELFSIMEDQKL 511
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+ + ++K + + T +QAC D+ + +H + + L V
Sbjct: 91 GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVA 150
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ M+ M A +F + E+D +W++MI GF +NGL +A+ F + A LK
Sbjct: 151 NALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLK 210
Query: 509 PDDQIFIGVFSACSALGDVVEG 530
PD+ I + +A LG ++ G
Sbjct: 211 PDEVSLISILAASGRLGYLLNG 232
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G + G EA++ L+ + D + ++ A G L K +H + +
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S LR+ N ++ MYS+C + A VF M +DL SW T+I +A+N +A+ +
Sbjct: 244 LDSNLRIG--NTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKL 301
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
+ + G+ D + ACS L + +H ++ + G+ M + I+D+
Sbjct: 302 LRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR--GLSDLMMQNM-IIDVY 358
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
G ++ A E + + DV W +++ C +H L
Sbjct: 359 ADCGNINYATRMFESIKCK-DVVSWTSMIS-CYVHNGL 394
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ D TF +++ACG + + +H + + V N ++ MY++C+ + A
Sbjct: 6 VPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR 65
Query: 466 SVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
+F M ER D+ SW+++I+ ++ NG +A+ +F + ++AG+ + + AC
Sbjct: 66 KLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQAC 122
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 200/335 (59%), Gaps = 18/335 (5%)
Query: 454 MYSECDSMDDAFSVFSNMT---ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
MY +C S+++A +VF ++ +RD+ +W+ MI G+A +G +A++ F Q + GL P
Sbjct: 1 MYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPT 60
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
D FIGV +ACS G V EG +M ++YGIVP ++HY +VD+LG G ++EA + +
Sbjct: 61 DITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLV 120
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
M +PD +W L+ CR+H NL LG R A+ L + L L+ +
Sbjct: 121 RSMKAKPDAAMWASLLGACRLHKNLALGQRVAD---YLVANGLANSGTYVLLSNMYAAAG 177
Query: 631 KEKENKKLASQ------------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK 678
K +E ++ S + +EV +V E+ AGD SHP + +IYA + + + +
Sbjct: 178 KWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIAR 237
Query: 679 EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHS 738
G++P T VLHD+D KE AL HSE+LA++ GL+S+P R I+I+KNLR C DCH+
Sbjct: 238 ARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHA 297
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LK++S+ GR+++ RD RFHHF DG CSC DYW
Sbjct: 298 VLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 332
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 218/373 (58%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC A + K +HE + L V ++ MY++C ++ + VF +
Sbjct: 192 TVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEI 251
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+++ +W+ +I+G+A NG G+ A+ FS+ KPD+ F+GV AC G V EG
Sbjct: 252 REKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGR 311
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
F SM + +G+ P ++HY +VD+LG G L+EALE I+ M +EPD +W L+ CR+
Sbjct: 312 WQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRV 371
Query: 592 HGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASE-----------LAKEKENKKLAS 640
HGN +LG+ + + +L+P+ N ++ L + + E + + +K+
Sbjct: 372 HGNTKLGEYIIKRLIELEPN--NGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPG 429
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E+ + V+E+ A + PE + IY + L ++KE GY+ T L+DI++E KE
Sbjct: 430 CSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALYDIEKEEKEH 489
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
+++ HSE+LA++ GLL+SP +RI+KNLR+C DCH K++S + R +++RD RFH
Sbjct: 490 SVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYIVVRDRNRFH 549
Query: 761 HFKDGLCSCRDYW 773
HF +G CSCRDYW
Sbjct: 550 HFYEGFCSCRDYW 562
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 394 AIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
++ + L+ K I D TF +++A K +H V ++ V T ++
Sbjct: 73 SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y C S+ DA +F M ER+ +W+ +ITG+ N A+D F G +P ++
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192
Query: 514 FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIE 571
+ V SACS LG +G E + Y + +V +++DM G + E + E
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFI---YHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFE 249
Query: 572 KMPMEPDVDVWEKLMNLCRMHG 593
++ E +V W L++ M+G
Sbjct: 250 EIR-EKNVYTWNVLISGYAMNG 270
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 240/409 (58%), Gaps = 23/409 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + + +EA+++ +L+K+ + D T ++ AC AL +A +H +V+R
Sbjct: 325 MISGYAESDQPQEALKLFDEMLQKRSVP-DQITMLSVISACSHVGALAQANWIHTYVDRS 383
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S N ++ MY++C ++ A VF NM +++ SW +MI FA +G + A+ +F
Sbjct: 384 GFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLF 443
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ K+ ++P+ FIGV AC G V EG F SM ++GI P+ +HY +VD+
Sbjct: 444 RRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCR 503
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP--------- 610
+L +A+E IE MP P+V +W LM+ C++HG ELG+ A+ + +L+P
Sbjct: 504 ANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVL 563
Query: 611 SRLNEKSK----AGLVPVNASE--LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETD 664
S + K K GL+ + S ++KEK + + +E+ ++VH + D H ++D
Sbjct: 564 SNIYAKEKRWNDVGLIRKSMSYKGISKEKASSR------IEINNQVHMFMMADRYHKQSD 617
Query: 665 KIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPI 724
+IY + + +++K GY P T +L D+++E K+E +L HSE+LAV +GL+S + I
Sbjct: 618 EIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCI 677
Query: 725 RIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RI+KNLR+C DCHS +K++SK+ E+++RD RFHH G+CSCRDYW
Sbjct: 678 RIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DG + G +A+ + + + D ++ ACG A L + +HE V+
Sbjct: 194 IDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGY 253
Query: 442 PLRVSTYNGILKMYSECDSMD-------------------------------DAFSVFSN 470
+ ++ MY+ C +MD DA +F
Sbjct: 254 AIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQ 313
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M ERDL W MI+G+A++ ++A+ +F + Q PD + V SACS +G + +
Sbjct: 314 MIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373
Query: 531 -MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H +G S+ + +++DM G L +A E E MP +V W ++N
Sbjct: 374 NWIHTYVDRSGFGRALSVNN--ALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAF 430
Query: 590 RMHGN 594
MHGN
Sbjct: 431 AMHGN 435
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
++D +F L++A A +H +L G++ MY+ C + DA
Sbjct: 118 ALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARL 177
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+F M D +W+ +I G+ +NG +DA+ +F + + +KPD I V SAC G+
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ G E KD G ++++M + G +D A
Sbjct: 238 LSYGRTIHE-FVKDNGYAIDSHLQTALINMYANCGAMDLA 276
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 233/408 (57%), Gaps = 21/408 (5%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V GK ++ ++ + + I VD+ T + ++ AC +A LE K +H +++++
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKI- 412
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
LR+ Y G ++ MYS+ S+DDA +F + E ++ W +MI+G A +G G++A+ +
Sbjct: 413 -GLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISL 471
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F G+ P++ F+GV +ACS +G + EG +F M Y I P ++HY S+V++ G
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYG 531
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN---- 614
G+L EA FI + + VW ++ CR+H N +G +E++ Q PS +
Sbjct: 532 RAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYIL 591
Query: 615 ---------EKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
+ +A +V L ++ KK Q+ ++++ ++H + GD SHP+ +
Sbjct: 592 LSNMCSSNHQWDEAAIV----RSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKE 647
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
IY+ + L ++KE GY + + V+ D+++E E + HSE+LA+ ++++ R PIR
Sbjct: 648 IYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIR 707
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IMKNLR+C DCH+ K S+++ RE+I+RD RFHHFK CSC +YW
Sbjct: 708 IMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DGL++ G + A+E L + TFS + +E + +H V L
Sbjct: 238 IDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRV--LTF 295
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMT----------------ERDLTSWDTMI 483
L Y + +++MY +C MD A ++ ++ + + SW +M+
Sbjct: 296 GLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMV 355
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
+G+ NG ED + F + D + + SAC+ G ++E + + G+
Sbjct: 356 SGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAG-ILEFGKQIHAYIQKIGL 414
Query: 544 VPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ YV S++DM +G LD+AL E++ EP+V +W +++ C +HG
Sbjct: 415 --RIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHG 463
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S +++ C ++ K +H + R V N IL +Y +C + A S F M
Sbjct: 136 TLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELM 195
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
E+D+ SW+ MI + + G E ++++F F + + I G+
Sbjct: 196 IEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLI 242
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 430 KAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK- 488
+A+H H + S +++ N +L +Y + ++D A +F +T ++ +W +I+GFA+
Sbjct: 52 RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSM 547
G E +F + + G P+ V CS ++ G +H + G +
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171
Query: 548 KHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
++ SI+D+ + A F E M +E DV W ++ G++E
Sbjct: 172 EN--SILDLYLKCKEFEYAESFFELM-IEKDVVSWNIMIGAYLREGDVE 217
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 227/408 (55%), Gaps = 20/408 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G + G+ +A+ + ++ + T ++ AC + + +H V
Sbjct: 305 MLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 364
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ + N I+ MY +C +D A +F+N + ERD++SW+ +I+G+ +G G++A+++
Sbjct: 365 MDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALEL 424
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+ + G++P+D F + SACS G + EG F M+K + P MKHY +VDMLG
Sbjct: 425 FSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLG 483
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G+L+EA I+K+P P +VW L+ CR+HGN ELG+ A + QL+P
Sbjct: 484 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVL 543
Query: 614 --------NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
N+ + +V N K + KK A+ +++E ++VH + D S P +
Sbjct: 544 MSNIYAASNKWKEVEMVRQNM----KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 599
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
+Y + L +MK GY+P+ VLHD++ E KE L HSE+LAV+ G++ PI+
Sbjct: 600 VYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQ 659
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLRVC DCH A K IS I GR++I+RD RFHHF+ G CSC DYW
Sbjct: 660 VTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
VS N I+ MY++C +++ A VF M ER+ SW++M++G+ +NG DA+ +F+Q +
Sbjct: 268 VSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 327
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ P+ + + SACS LG G LH +S I ++++ +I+DM G L
Sbjct: 328 SECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDL 385
Query: 564 DEALEFIEKMPM-EPDVDVWEKLMNLCRMHGN----LELGDRCAEIVEQLDP------SR 612
D A+E + E DV W L++ +HG+ LEL R VE ++P S
Sbjct: 386 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ--VEGVEPNDITFTSI 443
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEY 653
L+ S AGL+ ++ K A L VR ++ Y
Sbjct: 444 LSACSHAGLI---------DEGRKCFADMTKLSVRPEMKHY 475
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G+ EAI++ +++ + V+ T+ +++ C + VH V R
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C + DA VF M RD+ W MIT + + A+ +F
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGD 526
+ ++ G D+ I V SA LGD
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGD 248
>gi|302792230|ref|XP_002977881.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
gi|300154584|gb|EFJ21219.1| hypothetical protein SELMODRAFT_107359 [Selaginella moellendorffii]
Length = 464
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF + ACG AL E + +H + + NGI+ M+ C S++++ S F M
Sbjct: 94 TFMSAVDACGKLSALREGRVLHSSIMNSALKWDIVLQNGIVNMFGRCGSVEESSSAFQEM 153
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD SW MI+ FA NG G +A++ F G PD+ F+ + S C+ G + +
Sbjct: 154 LQRDAVSWSIMISAFAHNGHGTEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDAR 213
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
H M DY +VP + HYV +VD+L +G L A E +E MP EP W L+ C+M
Sbjct: 214 GHLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKM 273
Query: 592 HGNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVNASELAK----EKENKKLASQN 642
G+L+ G R + DP L A VN + + E+ KK A +
Sbjct: 274 QGDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCS 333
Query: 643 LLEVRSKVHEYRAGDTSHPE-TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+EV +VHE++AG+ SHP D +Y L++ ++ +M EAGY+ +TR V +D+++E KE
Sbjct: 334 YIEVHDRVHEFKAGEVSHPRHRDILYELMQ-IQRKMVEAGYVRDTRLVSYDLEEEEKENL 392
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+ GL+++ +R++KNLRVC DCH+A+K IS+I GR +++RD RFHH
Sbjct: 393 LTYHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHH 452
Query: 762 FKDGLCSCRDYW 773
F+DG+CSC DYW
Sbjct: 453 FEDGVCSCNDYW 464
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T+N ++ Y + ++F M +RD SW T++ +A++ ++++F + G
Sbjct: 28 TWNVLMAAYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEG 87
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
KP F+ AC L + EG +LH M+ +++ IV+M G G ++E
Sbjct: 88 YKPTRFTFMSAVDACGKLSALREGRVLHSSIMNSALKWDIVLQN--GIVNMFGRCGSVEE 145
Query: 566 ALEFIEKMPMEPDVDVWEKLMN 587
+ ++M ++ D W +++
Sbjct: 146 SSSAFQEM-LQRDAVSWSIMIS 166
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 223/403 (55%), Gaps = 20/403 (4%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G EA+E+ L + I DL T ++ A +L++ K +H + R L
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEG 588
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY+ C +M++A ++F+ + +RDL W +MI +G G+DA+D+FS+
Sbjct: 589 LIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDE 648
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ + ACS G VVEG HFE M +Y + P +HY +VD+L + L+E
Sbjct: 649 NVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEE 708
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A F+ MP+EP +VW L+ CR+H N +LG+ A+ + Q LN ++ V V+
Sbjct: 709 AYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQ-----LNTENSGNYVLVS 763
Query: 626 ASELAKEKEN--------------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ A + N KK + +EV +K+H + A D SHP+ + IY +
Sbjct: 764 NTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLA 823
Query: 672 GLRAQMKE-AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+KE GY +T+ V HD+ +E K + L HSERLA+ +GLL + +RI KNL
Sbjct: 824 QFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNL 883
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCH+ KI S+I R L++RDA RFHHF+ GLCSC D+W
Sbjct: 884 RICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V EG+ EA+ + +++ + + TF +QAC ++ + +H + + V
Sbjct: 227 VGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDV 286
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY+ C M+DA VF +M +D SW+T+++G +N + DA++ F + +
Sbjct: 287 YVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDS 346
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG---STGY 562
G KPD + + +A +++ GM + + +GI +M S++DM G Y
Sbjct: 347 GQKPDQVSVLNMIAASGRSANLLAGM-EVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 563 LDEALEFIEKMPMEPDVDVWEKLM 586
+ A E+ MP E D+ W ++
Sbjct: 406 MGSAFEY---MP-EKDLISWTTII 425
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGI 451
+A+ +L ++ + + VD ++ AC K+ + K +H +V + L+ + + N I
Sbjct: 436 DALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQ--NAI 493
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ +Y E +D A VF ++ +D+ SW +MIT NGL +A+++F+ + ++PD
Sbjct: 494 VNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDL 553
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDY---GIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ V A +AL + +G +H + K + G++ + S+VDM G ++ A
Sbjct: 554 ITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN-----SLVDMYARCGTMENAR 608
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ + D+ +W ++N MHG
Sbjct: 609 NIFNYVK-QRDLILWTSMINANGMHG 633
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSN 470
+SQ ++ C KAL + + +H H + + L V + MY +C S DA VF
Sbjct: 48 AYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDK 107
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
M+ER + +W+ MI G +A++++ + + G+ D F V AC A +
Sbjct: 108 MSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ V G+ EAIE+ + +S+D TF +++ACG K +H +
Sbjct: 119 MIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCG 178
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDI 498
V N ++ MY++C + A +F + M + D SW+++I+ G +A+ +
Sbjct: 179 YGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSL 238
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV------S 552
F + ++ G++ + F+ AC EG + + ++ H+ +
Sbjct: 239 FRRMQEVGVESNTYTFVSALQAC-------EGPTFIKIGRGIHAVILKSNHFTDVYVSNA 291
Query: 553 IVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ M + G +++A E + K + D W L++
Sbjct: 292 LIAMYANCGQMEDA-ERVFKSMLFKDCVSWNTLLS 325
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 33/204 (16%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY +C + S F M E+DL SW T+I G+A+N DA+++ + + +
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV------------SIVDM 556
D + + ACS L K ++ + YV +IV++
Sbjct: 451 VDPMMIGSILLACSGL--------------KSEKLIKEIHGYVLKGGLADILIQNAIVNV 496
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEK 616
G +D A E + D+ W ++ C +G L E+ L + + E
Sbjct: 497 YGELALVDYARHVFESIN-SKDIVSWTSMITCCVHNG---LAIEALELFNSLIETNI-EP 551
Query: 617 SKAGLVPV--NASELAKEKENKKL 638
LV V A+ L+ K+ K++
Sbjct: 552 DLITLVSVLYAAAALSSLKKGKEI 575
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 229/402 (56%), Gaps = 15/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GLV+ G+ + A+ + + I+ + T S +++AC LE+ K +H V + L
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF--GL 410
Query: 444 RVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ Y G ++ Y +C S + A SVF+ + E D+ S ++MI +A+NG G +A+ +FS
Sbjct: 411 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 470
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K GL+P++ ++GV SAC+ G + EG F S I + HY +VD+LG G
Sbjct: 471 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 530
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA I ++ + DV +W L++ CR+HG++E+ R V L P S
Sbjct: 531 RLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSN 589
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L + + +E KK + + ++V ++H + AGD SHP I +
Sbjct: 590 LYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEE 649
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR-APIRIMKNLR 731
L ++KE GY+P+TRFVL D+D+E K +L HSE+LAV+ L S + IRI+KNLR
Sbjct: 650 LIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLR 709
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+ +K +SKIVGR++I RD KRFHHF++GLCSC DYW
Sbjct: 710 VCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 401 LEKQCISVDLPT---FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
+ K CI+ + + +S L+Q C K++ + + H L S N ++ Y +
Sbjct: 65 IRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHA--LKRGFHHSLGNKLIDAYLK 122
Query: 458 CDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
C S+ A VF + R + +W++MI + +NG ++A+DI+ + G+ PD+ F V
Sbjct: 123 CGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSV 182
Query: 518 FSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
F A S LG V EG H +S+ G V ++ ++VDM G + +A + +
Sbjct: 183 FKAFSDLGLVHEGQRAHGQSVVLGVG-VSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVG 240
Query: 577 PDVDVWEKLM 586
DV ++ L+
Sbjct: 241 KDVVLFTALI 250
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLR 444
++ G+ KEAI++ + I D TFS + +A D + E + H + V +
Sbjct: 152 IRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSN 211
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + ++ MY++ M DA V + +D+ + +I G++ +G +++ +F +
Sbjct: 212 VFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTK 271
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G++ ++ V C L D+ G L + G+ ++ S++ M G +D
Sbjct: 272 KGIEANEYTLSSVLVCCGNLEDLTSGRL-IHGLIVKAGLESAVASQTSLLTMYYRCGLVD 330
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
++L+ ++ + P+ W ++
Sbjct: 331 DSLKVFKQF-INPNQVTWTSVI 351
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 227/408 (55%), Gaps = 20/408 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G + G+ +A+ + ++ + T ++ AC + + +H V
Sbjct: 274 MLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 333
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSN--MTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ + N I+ MY +C +D A +F+N + ERD++SW+ +I+G+ +G G++A+++
Sbjct: 334 MDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALEL 393
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
FS+ + G++P+D F + SACS G + EG F M+K + P MKHY +VDMLG
Sbjct: 394 FSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLG 452
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G+L+EA I+K+P P +VW L+ CR+HGN ELG+ A + QL+P
Sbjct: 453 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVL 512
Query: 614 --------NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDK 665
N+ + +V N K + KK A+ +++E ++VH + D S P +
Sbjct: 513 MSNIYAASNKWKEVEMVRQNM----KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 568
Query: 666 IYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIR 725
+Y + L +MK GY+P+ VLHD++ E KE L HSE+LAV+ G++ PI+
Sbjct: 569 VYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQ 628
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLRVC DCH A K IS I GR++I+RD RFHHF+ G CSC DYW
Sbjct: 629 VTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M ER+ SW++M++G+ +NG DA+ +F+Q + + P+ + + SACS LG
Sbjct: 259 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 527 VVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM-EPDVDVWEK 584
G LH +S I ++++ +I+DM G LD A+E + E DV W
Sbjct: 319 KHLGRKLHNFVISSKMDIDTTLRN--AIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNV 376
Query: 585 LMNLCRMHGN----LELGDRCAEIVEQLDP------SRLNEKSKAGLVPVNASELAKEKE 634
L++ +HG+ LEL R VE ++P S L+ S AGL+ ++
Sbjct: 377 LISGYGVHGHGKEALELFSRMQ--VEGVEPNDITFTSILSACSHAGLI---------DEG 425
Query: 635 NKKLASQNLLEVRSKVHEY 653
K A L VR ++ Y
Sbjct: 426 RKCFADMTKLSVRPEMKHY 444
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L G+ EAI++ +++ + V+ T+ +++ C + VH V R
Sbjct: 103 MLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTG 162
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ ++ MY++C + DA VF M RD+ W MIT + + A+ +F
Sbjct: 163 FGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFR 222
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGD----VVEGMLHFESMSKDYGI 543
+ ++ G D+ I V SA LGD + L F+ M + GI
Sbjct: 223 KMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGI 269
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 231/404 (57%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ +EAIEV ++ Q ++ D T + ACG AL+ AK ++ ++E+
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ M+S C + A S+F+++T RD+++W I A G E A+++F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GLKPD F+G +ACS G V +G F SM K +G+ P HY +VD+LG
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G L+EA++ IE MPMEP+ +W L+ CR+ GN+E+ AE ++ L P R
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 614 NEKSKAG----LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG + V S KEK +K + +++R K HE+ +GD SHPE I A+
Sbjct: 681 NVYASAGRWNDMAKVRLS--MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + + G++P+ VL D+D++ K L HSE+LA+++GL+SS IRI+KN
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKN 798
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCHS K SK+ RE+I+RD RFH+ + G CSC D+W
Sbjct: 799 LRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 368 EASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
E +S++ GT + L++ G EAI + + IS D TF + AC +
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+A +H + ++ + N ++ Y+EC +D A VF M+ER++ SW +MI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 484 TGFAKNGLGEDAVDIFSQF-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
G+A+ +DAVD+F + + + P+ + V SAC+ L D+ G + + ++ G
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSG 266
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEA 566
I + ++VDM +D A
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVA 290
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER------- 438
V++G +EA+ V L+ + D + + +C + + K+ H +V R
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 439 ------------------------LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+S V T+N I+ Y E +D A+ F M E+
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
++ SW+T+I+G + L E+A+++F + Q G+ D + + SAC LG +
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ + K+ GI ++ ++VDM G + A+ + DV W
Sbjct: 493 YYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 384 GLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G + K+A+++ ++ + ++ + T ++ AC + LE + V+ +
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
+ + ++ MY +C+++D A +F +L + M + + + GL +A+ +F+
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEG 530
+G++PD + S+CS L +++ G
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWG 356
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 227/406 (55%), Gaps = 15/406 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA-----VHEHV 436
L ++G +EA+ +L + +Q D T + A L K VH ++
Sbjct: 264 LSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYI 323
Query: 437 ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
E+ P + ++ M++ C A VF+ MTERD+++W I A G GE A
Sbjct: 324 EKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGAT 383
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F+Q G+KPD +F+ V +ACS G V +G LH S+ +D+GI P ++HY +VD+
Sbjct: 384 GLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQG-LHIFSLMEDHGISPQIEHYGCMVDL 442
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL--- 613
LG G L EA + I+ MPMEP+ VW L+ CR+H N+E+ AE + +L P R
Sbjct: 443 LGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVH 502
Query: 614 ----NEKSKAG-LVPVNASEL-AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
N + AG V L +EK +K+ + ++V +HE+ +GD SHPE I
Sbjct: 503 VLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIA 562
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+++ + + +AG+IP+ VL D+D++ KE L HSE+LA++ GL+++ PIR++
Sbjct: 563 LMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVV 622
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLR+C DCHS K+ S I RE+I+RD RFH F+ GLCSC DYW
Sbjct: 623 KNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ C A E VH V ++ V N ++ Y+EC MD VF M
Sbjct: 133 TFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ER++ SW ++I G+A+ ++AV +F
Sbjct: 193 SERNVVSWTSLICGYARGDRPKEAVSLF 220
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 219/378 (57%), Gaps = 16/378 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ C AL + K +H + + + V+ + ++ MY++C ++ A VF M
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG------LKPDDQIFIGVFSACSALG 525
R++ +W+ +I + +G GE+A+++F G ++P++ +I +F+ACS G
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEK 584
V EG+ F +M +G+ P HY +VD+LG +G + EA E I MP + VD W
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSS 937
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLV--PVNASELAKEKEN 635
L+ CR+H ++E G+ A+ + L+P+ N S AGL + + KE
Sbjct: 938 LLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGV 997
Query: 636 KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQ 695
+K + +E +VH++ +GD SHP++ +++ + L +M++ GY+P+ VLH++D
Sbjct: 998 RKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDD 1057
Query: 696 EGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
E KE L HSERLA++ GLL++P IR+ KNLRVC DCH A KIISKIV RE+I+RD
Sbjct: 1058 EEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRD 1117
Query: 756 AKRFHHFKDGLCSCRDYW 773
+RFHHF +G CSC DYW
Sbjct: 1118 VRRFHHFANGTCSCGDYW 1135
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ ++ AC K + + +H ++ + N ++ MYS ++ + ++F M
Sbjct: 639 TFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRM 698
Query: 472 TERDLTSWDTMITGFAKNGL---------------GEDAVDIFSQFKQAG---LKPDDQI 513
+RD+ SW+TMITG G GED D F ++ G KP+
Sbjct: 699 NKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVT 758
Query: 514 FIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
+ V C+AL + +G +H ++ + + ++ ++VDM G L+ A ++
Sbjct: 759 LMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGS--ALVDMYAKCGCLNLASRVFDQ 816
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLE 596
MP+ +V W L+ MHG E
Sbjct: 817 MPIR-NVITWNVLIMAYGMHGKGE 839
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 412 TFSQLMQACGDAKA-LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
T + AC + + K VH + R LR T N ++ MY+ ++DA ++F
Sbjct: 435 TLVSVAHACSHVRGGVRLGKQVHAYTLRN-GDLRTYTNNALVTMYARLGRVNDAKALFGV 493
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+DL SW+T+I+ ++N E+A+ G++PD V ACS L
Sbjct: 494 FDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQL 547
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
F +++A L K +H HV + P V+ N ++ MY +C + A VF
Sbjct: 332 AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD 391
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
++ +RD SW++MI + E ++ +F + P + V ACS
Sbjct: 392 DIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACS 444
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--- 438
+ L + + +EA+ + L+ + D T + ++ AC + L + +H + R
Sbjct: 506 ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGD 565
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L+ V T ++ MY C VF + R + W+ ++ G+A+N + A+ +
Sbjct: 566 LIENSFVGT--ALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRL 623
Query: 499 FSQ-FKQAGLKPDDQIFIGVFSAC 521
F + ++ P+ F V AC
Sbjct: 624 FVEMISESEFCPNATTFASVLPAC 647
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 221/402 (54%), Gaps = 10/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G +G+V E + +++++ + T + ++ C AL K +H + +
Sbjct: 249 IAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRK 308
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++C + VF M +DLTSW+TM+ GF+ NG +A+ +F +
Sbjct: 309 NADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDE 368
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G++P+ F+ + S CS G EG F ++ +D+G+ PS++HY +VD+LG +G
Sbjct: 369 MIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSG 428
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
DEAL E +PM P +W L+N CR++GN+ L + AE + +++P+
Sbjct: 429 KFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSN 488
Query: 622 VPVNAS---------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ NA E+ KK A + ++++ K+H + AG +S Y I
Sbjct: 489 IYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWN 548
Query: 673 -LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +K GY+P T VLHDI++E K + HSERLA L+++ A PIRI KNLR
Sbjct: 549 ELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLR 608
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VC DCHS +K +SK+ R +++RD RFHHF++G CSC+DYW
Sbjct: 609 VCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV----STYNGILKMYSECDSMDDAFSV 467
+ S + AC ++LE + +H H+ R S RV + ++ +YS C +++A V
Sbjct: 72 SISLFLHACISRRSLEHGRKLHLHLLR--SQNRVLENPTLKTKLITLYSVCGRVNEARRV 129
Query: 468 FSNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
F E+ + W M G+++NG +A+ ++ +KP + F ACS L
Sbjct: 130 FQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLD 189
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ + G +H + + D G + + +++ + G DE L+ E+MP + +V W
Sbjct: 190 NALVGRAIHAQIVKHDVGEADQVVNN-ALLGLYVEIGCFDEVLKVFEEMP-QRNVVSWNT 247
Query: 585 LM 586
L+
Sbjct: 248 LI 249
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSN 470
FS ++AC D +A+H + + + N +L +Y E D+ VF
Sbjct: 177 AFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEE 236
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M +R++ SW+T+I GFA G + + F ++ G+ + C+ + + G
Sbjct: 237 MPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSG 296
Query: 531 M-LHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
+H + + S+ VP + + + G GY ++ +
Sbjct: 297 KEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFD 336
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 222/402 (55%), Gaps = 11/402 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G K G + A+ V + + T+S +++AC ++ VH +E+
Sbjct: 806 IVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTF 865
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
N ++ Y++C + DA +F + E DL SW+ +I+G+A +G A ++F
Sbjct: 866 NSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDM 925
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ +K +D F+ + S C + G V +G+ F+SM D+GI PSM+HY IV +LG G
Sbjct: 926 MSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAG 985
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLN 614
L++AL FI +P P VW L++ C +H N+ELG AE V +++P N
Sbjct: 986 RLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSN 1045
Query: 615 EKSKAGLVPVNASELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
S AG + + K N +K + +E++ +VH + G HP I A++
Sbjct: 1046 MYSAAGSLD-QVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLE 1104
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L + GY+P+T VLHD+++E K L HSERLA+++GL+ +P PIRIMKNLR
Sbjct: 1105 WLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLR 1164
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCH+ K+ISKIV +E+I+RD RFHHF++G CSC DYW
Sbjct: 1165 SCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 123/263 (46%), Gaps = 33/263 (12%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFA----EASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGL 400
GNI++ +A +++ N DD SR +Q N ++A E+
Sbjct: 681 GNIEDARLAFEMVTN----DDVILWSLMISRYAQCNQN-------------EQAFELFIR 723
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
+ + +S + + S ++QAC + L+ K +H H ++ + N ++ +Y++C
Sbjct: 724 MMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSD 783
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
M+ + +FS++ + + SW+T+I G++K+G GE A+ +F + + A + + V A
Sbjct: 784 MESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRA 843
Query: 521 CSALGDV-----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPM 575
C++ + V ++ + + D IV + S++D G + +A E E +
Sbjct: 844 CASTASINHVGQVHCLIEKSTFNSD-TIVSN-----SLIDSYAKCGCIRDAREIFETLK- 896
Query: 576 EPDVDVWEKLMNLCRMHGNLELG 598
E D+ W +++ +HG +
Sbjct: 897 ECDLVSWNAIISGYAVHGQAAMA 919
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ YS C + DA VF + +D +W M++ +++N E+ + IFS+ + A K
Sbjct: 570 SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKH-YVSIVDMLGSTGYLDEA 566
+ V A L VV G +H S+ Y + +H Y +++DM G +++A
Sbjct: 630 LNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYD---TERHVYGALLDMYAKCGNIEDA 686
Query: 567 -LEFIEKMPMEPDVDVWEKLMN 587
L F +M DV +W +++
Sbjct: 687 RLAF--EMVTNDDVILWSLMIS 706
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 408 VDLPTFSQLMQAC---GDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMD 462
VD +++L+Q C GDA+ +AVH HV R L+ L + N +L MY++
Sbjct: 426 VDSYAYARLLQGCVARGDARG---GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFG 482
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
A VF + ER++ S+ T++ G A G E+A +F + + G + + + V
Sbjct: 483 SAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVV 542
Query: 523 AL 524
A+
Sbjct: 543 AM 544
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ +++A ++ K +H + L Y +L MY++C +++DA F +
Sbjct: 634 ALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMV 693
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACS 522
T D+ W MI+ +A+ E A ++F + ++ + P++ V AC+
Sbjct: 694 TNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA 744
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 227/398 (57%), Gaps = 15/398 (3%)
Query: 389 GKVKEAIEVLGLLE-KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
GK KEA+ + L+ + + T + + AC A++ +H ++++ L
Sbjct: 343 GKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHI 402
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
++ MYS+C ++ A VF ++ RD+ W MI G A +G G A+D+FS+ ++ +
Sbjct: 403 TTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKV 462
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
KP+ F + ACS G V EG L F M YG+VP KHY +VD+LG G L+EA+
Sbjct: 463 KPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAV 522
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
E IEKMP+ P VW L+ CR++GN+EL + + + D + N + L + A
Sbjct: 523 ELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSN--NHGAYVLLSNIYAK 580
Query: 628 E-----LAKEKENKKLASQ------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+++ +++ K++ + +EV +HE+ GD SHP + +IY+ + + A+
Sbjct: 581 AGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVAR 640
Query: 677 MKEAGYIPETRFVLHDIDQE-GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+K GY+ + +L +++E KE AL HSE+LA+++GL+ PIRI+KNLRVCGD
Sbjct: 641 IKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGD 700
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHS K+ISK+ R++++RD RFHHF G CSC DYW
Sbjct: 701 CHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF +++A + +L +A+H V + + N ++ YS +D A+ VFS +
Sbjct: 133 TFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKI 192
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
E+D+ SW++MI+GF + G E+A+ +F + K +P+ +GV SAC+ D
Sbjct: 193 VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRID----- 247
Query: 532 LHFESMSKDY----GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
L F + DY GI ++ +++DM G L++A +KM E D+ W +++
Sbjct: 248 LEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTMID 306
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRLN 614
G+ + R +++ + D + N
Sbjct: 307 GYAKVGDYDAARRVFDVMPREDITAWN 333
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G +EA+++ ++ + + T ++ AC LE + +++ER
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK------------ 488
+ + N +L MY +C S++DA +F M E+D+ SW TMI G+AK
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 489 -------------------NGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDV- 527
NG ++A+ IF + + KP++ +AC+ LG +
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+ G +H K GI + S++DM G+L++ALE + DV VW ++
Sbjct: 383 LGGWIHV--YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR-DVFVWSAMIA 439
Query: 588 LCRMHGN 594
MHG+
Sbjct: 440 GLAMHGH 446
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 30/190 (15%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER---LLSPLRVSTYNGILKMYSEC-----DSMDD 463
T L+ C + K L K +H H+ R P + K+++ C S+D
Sbjct: 32 TVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSAT------KLFTACALSSPSSLDY 82
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK-PDDQIFIGVFSACS 522
A VF + +L +W+T+I FA + + +F Q + P+ F V A +
Sbjct: 83 ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142
Query: 523 AL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
+ G + GM+ S D I S+ H+ S S G LD A K+ +E
Sbjct: 143 EVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYS------SLGDLDSAYLVFSKI-VEK 195
Query: 578 DVDVWEKLMN 587
D+ W +++
Sbjct: 196 DIVSWNSMIS 205
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 233/408 (57%), Gaps = 19/408 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G AIEV + + D TF + AC A AL+ HE VERL+
Sbjct: 180 MISGYEQNGLAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLG---HE-VERLI 235
Query: 441 SPLR----VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
R V ++ MY+ C ++ A F + ER++ +W +MI G+ +G G +AV
Sbjct: 236 VSERMEMNVVLGAALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAV 295
Query: 497 DIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+F +Q G P+D F+ V SAC+ G V +G F SM YG+VP +HY S+VDM
Sbjct: 296 KLFDLMRQQGPPPNDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDM 355
Query: 557 LGSTGYLDEALEFI-EKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNE 615
G G LD+A++FI + +P EP +VW ++ C+MH N LG AE + L+P +
Sbjct: 356 YGRAGLLDDAMQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSH 415
Query: 616 KSKAGLV-----PVNASELAK----EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKI 666
+ + +N E + ++ KK +L+E+ H +R G+ SHP+T +I
Sbjct: 416 RVLLSNIYALSGKMNHVEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEI 475
Query: 667 YALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL-LSSPARAPIR 725
Y + L ++ +AGY+PET VLH++++E +E AL H E+LAV+ GL ++S APIR
Sbjct: 476 YQYLEKLIHRITDAGYMPETDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIR 535
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I+KNLR+CGDCH A+K +S + RE+I+RD RFHHFK G CSC++YW
Sbjct: 536 IIKNLRICGDCHLAIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 583
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 403 KQCISVDLP----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
++ ++ LP F+ + +AC D AL VH H L ++ +YS+C
Sbjct: 97 RRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSDRFVQTALVVLYSKC 156
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+D A +F + +R + +W+ MI+G+ +NGL A++++ + + AG PD F+
Sbjct: 157 GKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYREMRVAGEAPDSATFVATL 216
Query: 519 SACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM 573
SAC+ LG VE ++ E M + + ++V+M G +++A E+ + M
Sbjct: 217 SACAQAGALDLGHEVERLIVSERMEMNVVL------GAALVNMYARCGLVNKAREWFD-M 269
Query: 574 PMEPDVDVWEKLMNLCRMHGN 594
E +V W ++ MHG+
Sbjct: 270 LQERNVVTWTSMIAGYGMHGH 290
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 226/401 (56%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+D ++ +EA+ + ++ + + + TF+ + + + L+ +H V +
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGY 369
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++ S++DA FS MT RD+ +W+TMI GF+ +GLG + ++ F +
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDR 429
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
AG P+ FIGV ACS +G V +G+ +F + K + + P ++HY IV +L G
Sbjct: 430 MMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAG 489
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+A +F+ P+E DV W L+N C + N LG + AE P S
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSN 549
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++ KS+ L ++ KK + + +R++ H + A + HPE IYA I+
Sbjct: 550 IHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKE 609
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ ++++ GY P+ V HD+D+E +E+ L HSE+LAV++GL+ +P +P+ + KN+R+
Sbjct: 610 VLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRI 669
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K+ISKI R ++IRD+ RFHHF+DG CSC DYW
Sbjct: 670 CDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSCCDYW 710
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 109/228 (47%), Gaps = 16/228 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G ++ G KE EVL + K+ + +D T+ ++ C + + L A+ +H + RL
Sbjct: 209 LSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGF 268
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V I+ MY +C + A VF N +++ T++ + ++ E+A+++FS+
Sbjct: 269 NSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 502 FKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+ P++ F ++ + L GD++ G++ +S +++ +V + ++V+M
Sbjct: 329 MDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLV-LKSGYRNHVMVGN-----ALVNM 382
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG----NLELGDR 600
+G +++A + M D+ W ++ HG LE DR
Sbjct: 383 YAKSGSIEDARKAFSGMTFR-DIVTWNTMICGFSHHGLGREGLEAFDR 429
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLR---VSTYNGILKMYSECDSMDDAFSVFS 469
++L++ C ++ L +++H H+ R V N ++ +Y +C A VF
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M ER++ SW M+ G+ +G + + +F S +P++ + VF +CS+ G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 529 EG 530
EG
Sbjct: 154 EG 155
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 235/401 (58%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EA+ + + + +D TFS +++ C +LE AK H + R
Sbjct: 305 IAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGF 364
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + ++ +YS+ ++DA VF M +++ SW+ +I G+ +G G +AV++F +
Sbjct: 365 GLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFER 424
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+ P+ F+ V SACS G G FESMS+D+ I P HY ++++LG G
Sbjct: 425 MLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREG 484
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LN 614
LDEA I+ P +P V++W L+ CR+H N ELG AE + + P + LN
Sbjct: 485 LLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLN 544
Query: 615 EKSKAGLVPVNASEL--AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+++G + A+ + K + + L + + +E++ + + + +GD H ++ +IY +
Sbjct: 545 IYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDE 604
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++ + GY+P+ +F+L D+D++ +E LL HSE+LA++ GL+++ P++I+++ R+
Sbjct: 605 LMLEISKHGYVPQDKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRI 663
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA+K+I+ + RE+++RDA RFHHFKDG CSC DYW
Sbjct: 664 CGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLV G EA + ++ + F +++A + + +H +
Sbjct: 204 IGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGV 263
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS+C S++DA VF M E+ W+++I G+A +G E+A+ ++ +
Sbjct: 264 GGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYE 323
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ +G+K D+ F + C+ L + + + +G + ++VD+ G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWG 382
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+++A + MP +V W L+ +GN G E+ E++ L+E G+
Sbjct: 383 RIEDAKHVFDMMP-HKNVISWNALIA---GYGNHGRGVEAVEMFERM----LHE----GM 430
Query: 622 VPVNASELA 630
VP + + LA
Sbjct: 431 VPNHVTFLA 439
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 230/429 (53%), Gaps = 15/429 (3%)
Query: 360 CKHED-DFAEASRSSQNNGTLE----QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
C+ D D A + + T+E + G + G + A+ + ++ + + T S
Sbjct: 368 CRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTIS 427
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+ AC AL K VH+ + L V ++ MY +C S+ +A +F +M +
Sbjct: 428 SALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK 487
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
++ SW+ MI+G+ +G G +A+ ++ A L P F+ V ACS G V EG F
Sbjct: 488 NVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVF 547
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP-DVDVWEKLMNLCRMHG 593
SM+ DYGI P ++H +VD+LG G L EA E I + P +W L+ C +H
Sbjct: 548 RSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHK 607
Query: 594 NLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLL 644
+ +L ++ + +L+P S L K + AK ++ K L+
Sbjct: 608 DGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLI 667
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLA 704
E+ + H + AGD +HP++D IY + L A+M EAGY P+T L+D+++E KE +
Sbjct: 668 EIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKV 727
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LA++ GLL++ IRI+KNLRVC DCH+A KIISK+ R +++RDA RFHHF+D
Sbjct: 728 HSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRD 787
Query: 765 GLCSCRDYW 773
G+CSC DYW
Sbjct: 788 GVCSCGDYW 796
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
A +H HV + + +Y + MD A F M E+ + SW+ MI+G+A+
Sbjct: 341 AGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQ 400
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-----VEGMLHFESMSKDYGI 543
NGL E AV +F Q + ++P+ SAC+ LG + V ++ E + + +
Sbjct: 401 NGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYV 460
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ +++DM G + EA + M +V W +++ +HG
Sbjct: 461 M------TALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNVMISGYGLHG 503
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + ++ A + + VH E+ G++ +Y++C M+ A +F
Sbjct: 220 DSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLF 279
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG-DV 527
M DL +++ +I+G++ NG+ +V++F + GL+P + + S G +
Sbjct: 280 DRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEP 339
Query: 528 VEGMLH 533
+ G LH
Sbjct: 340 LAGCLH 345
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 227/401 (56%), Gaps = 9/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+D ++ +EA+ + ++ + + + TF+ L+ + + L++ +H V +
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY 369
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++ S++DA FS MT RD+ +W+TMI+G + +GLG +A++ F +
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G P+ FIGV ACS +G V +G+ +F + K + + P ++HY IV +L G
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
+A +F+ P+E DV W L+N C + N LG + AE + P S
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSN 549
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
++ KS+ L + KK + + +R++ H + A D HPE IYA ++
Sbjct: 550 IHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKE 609
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
+ +++K GY P+ HD+D+E +E+ L HSE+LAV++GL+ +P ++P+ + KN+R+
Sbjct: 610 VMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRI 669
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K+ISKI R ++IRD+ RFHHF DG CSC DYW
Sbjct: 670 CDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 18/246 (7%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS---TYNGILKMYSECDSMDDAFSVFS 469
++L++ C ++ L +++H H+ R N ++ +Y +C A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M ER++ SW M+ G+ +G + + +F S F +P++ + VF +CS G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG F YG++ ++V M EA+ ++ +P D+ V+ ++
Sbjct: 154 EGK-QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY-CDLSVFSSALS- 210
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNL-LEVR 647
G LE C E LD L + + V N + L+ + L NL L+V
Sbjct: 211 ----GYLE----CGAFKEGLDV--LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVH 260
Query: 648 SKVHEY 653
S++ +
Sbjct: 261 SRMVRF 266
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L G ++ G KE ++VL + + T+ ++ + + L A VH + R
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MY +C + A VF + +++ T++ + ++ E+A+++FS+
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 502 FKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+ P++ F + ++ + L GD++ G++ +S +++ +V + ++V+M
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLV-LKSGYRNHVMVGN-----ALVNM 382
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG----NLELGDR 600
+G +++A + M D+ W +++ C HG LE DR
Sbjct: 383 YAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDR 429
>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 514
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 225/410 (54%), Gaps = 25/410 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
L GL + A++V + + D + + +C A ALE ++VH RL L
Sbjct: 112 LTGLARSRSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLAL 171
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
P +S N ++ MY++ S+ +A VF + + D +W +I G+A+NG G ++++I
Sbjct: 172 DPF-LSVGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEI 230
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
++ ++G +PD FIG+ ACS G V G HF SM ++GI P HY +VD+LG
Sbjct: 231 YADMVRSGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLG 290
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL----- 613
G LDEA++ + + D VW+ L+ CR H N EL + A +V +LDP+
Sbjct: 291 RAGRLDEAMDLLNRSTTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVM 350
Query: 614 --NEKSKAGL--------VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPET 663
N S+AG + A + KE +A+ + H + D HP
Sbjct: 351 LSNLYSRAGRWGDVARVRTSMKARGITKEPGCSWVAANGV------THLFYVEDRRHPRA 404
Query: 664 DKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAP 723
++Y + + +++ GY+ +T + L D EG+E+ L HSERLAV+ GLL+ PA AP
Sbjct: 405 AEVYRKVEEMTERIRGQGYVADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAP 464
Query: 724 IRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IR+ KNLRVCGDCH+A+K++++ GRE+++RD+ FHH KDG CSC DYW
Sbjct: 465 IRVFKNLRVCGDCHAAIKMVAQAYGREIVLRDSNCFHHMKDGACSCGDYW 514
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 429 AKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK 488
A A+H + R + N ++ Y++ A +VF M RD+ SW +++TG A+
Sbjct: 58 ADALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLAR 117
Query: 489 NGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMK 548
+ + A+ ++ AG+ PD+ S+C+ +E + + + P +
Sbjct: 118 SRSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAG-ATALELGRSVHAAAVRLALDPFLS 176
Query: 549 HYVSIVDMLGSTGYLDEALEFIEKMPMEP-DVDVWEKLM 586
S+V M TG L EA + + ++ D W L+
Sbjct: 177 VGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALI 215
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 226/399 (56%), Gaps = 6/399 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + +EA+ + + D TF+ ++ C + A+ VH +
Sbjct: 125 MIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKK 184
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ +YS+C ++ A VF+++ D++ W++MI G A +GL DA+ +FS
Sbjct: 185 IQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFS 244
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + PD FIG+ +ACS G V +G +F+ M + Y I P ++HY ++VD+LG
Sbjct: 245 QMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRA 304
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--LNEKSK 618
G ++EA I+ MPMEPD+ +W L++ CR N ELG+ + L+ L
Sbjct: 305 GLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMY 364
Query: 619 AGLVPVNASELAKEKENKKLASQN----LLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
L +++E +E + +N +E+ +H+++AGD SHPET IY ++ GL
Sbjct: 365 CSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLI 424
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+ K G++P T VL D+ E +EE L +HSE+LA+++ +L + IR+ KNLR C
Sbjct: 425 RRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCH 484
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH +KI+S+++ R +I+RD RFH F+ GLCSCRDYW
Sbjct: 485 DCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T N I+ + D A VF M RD+ +W++MI G +N E+A+ F + +
Sbjct: 90 TANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSN 149
Query: 507 LKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++PD F V + C+ LG ++V G++ + + ++ I+ S +++D+ G
Sbjct: 150 VEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNF-ILSS-----ALIDLYSKCG 203
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++ A + + + DV VW ++N +HG
Sbjct: 204 RINTAKKVFNSIQHD-DVSVWNSMINGLAIHG 234
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 212/372 (56%), Gaps = 11/372 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ ACG AL E + +H + V NGI+ M+ C S++++ S F M
Sbjct: 267 TFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEM 326
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+RD SW MI+ FA NG G +A++ F G PD+ F+ + S C+ G + +
Sbjct: 327 LQRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDAR 386
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
H M DY +VP + HYV +VD+L +G L A E +E MP EP W L+ C+M
Sbjct: 387 GHLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKM 446
Query: 592 HGNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVNASELAK----EKENKKLASQN 642
G+L+ G R + DP L A VN + + E+ KK A +
Sbjct: 447 QGDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCS 506
Query: 643 LLEVRSKVHEYRAGDTSHPE-TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEA 701
+EV +VHE++AG+ SHP D +Y L++ ++ +M EAG + +TR V +D+++E KE
Sbjct: 507 YIEVHDRVHEFKAGEVSHPRHRDILYELMQ-IQRKMVEAGCVRDTRLVSYDLEEEEKENL 565
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA+ GL+++ +R++KNLRVC DCH+A+K IS+I GR +++RD RFHH
Sbjct: 566 LTYHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHH 625
Query: 762 FKDGLCSCRDYW 773
F+DG+CSC DYW
Sbjct: 626 FEDGVCSCNDYW 637
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
KEA+++ ++ Q + TF + A G+ AL E A+HE V + +
Sbjct: 141 KEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATAL 200
Query: 452 LKMYSECDSMDD-----AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+ + +C ++F M +RD SW T++ +A++ ++++F + G
Sbjct: 201 INFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEG 260
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
KP F+ V AC L + EG +LH M+ +++ IV+M G G ++E
Sbjct: 261 YKPTRFTFMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQN--GIVNMFGRCGSVEE 318
Query: 566 ALEFIEKMPMEPDVDVWEKLMN 587
+ ++M ++ D W +++
Sbjct: 319 SSSAFQEM-LQRDAVSWSIMIS 339
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 222/386 (57%), Gaps = 30/386 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSP-LRVSTYNGILKMYSECDSMDDAFSVFSN 470
T ++ AC + L + VH + + L + ++ MY++C + AF F
Sbjct: 253 TLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKK 312
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +R++ SW+ M++G A +GLG A+DIF Q FK+A KPDD F V SACS G V +
Sbjct: 313 MPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA--KPDDVTFTSVLSACSHSGLVDQ 370
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G +F ++ YGI P ++HY +VD+LG G L+EA + +MP+ P+ V L+ C
Sbjct: 371 GCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSC 430
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA-------------KEKENK 636
+HG L+LG+ + + QLDP + ++ ++ N LA K++ K
Sbjct: 431 SIHGKLQLGEHLLQELVQLDP----QNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIK 486
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRF-------V 689
K+ + + V +VH++ AGD SHP T ++Y ++ + +++ AGY P T
Sbjct: 487 KVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDS 546
Query: 690 LHD--IDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIV 747
L D ++QE KE+AL +HSE+LA+ GL+S+ P+ I KNLR+C DCHSA+KI+SKI
Sbjct: 547 LEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIY 606
Query: 748 GRELIIRDAKRFHHFKDGLCSCRDYW 773
RE++IRD RFH FK+G CSC DYW
Sbjct: 607 NREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 416 LMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-- 471
L+++C +L+ + +H + + +N +L+ Y+ C A VF +
Sbjct: 19 LLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDEIPH 78
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ +D W T++ F ++ + ++A+ IF + ++ G+KPD+ + +F C+ LGDVV G
Sbjct: 79 SHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGA 138
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
M K G+ K +++DM +G + EA +M + V W +++
Sbjct: 139 QGHGCMVK-MGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVS-WTVILD 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK- 503
V ++ IL + + + VF M ER+ +W MI G+ +GL +++ + +
Sbjct: 184 VVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIF 243
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEG-MLH---FESMSKDYGIVPSMKHYVSIVDMLGS 559
++ + + +ACS GD++ G +H ++ K+ I+ ++VDM
Sbjct: 244 DLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVG----TAMVDMYAK 299
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G + A +F +KMP + +V W +++ MHG LG +I Q+
Sbjct: 300 CGRIHIAFKFFKKMP-QRNVVSWNAMLSGLAMHG---LGRAALDIFPQM 344
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 226/399 (56%), Gaps = 6/399 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ + +EA+ + + D TF+ ++ C + A+ VH +
Sbjct: 164 MIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKK 223
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ +YS+C ++ A VF+++ D++ W++MI G A +GL DA+ +FS
Sbjct: 224 IQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFS 283
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + PD FIG+ +ACS G V +G +F+ M + Y I P ++HY ++VD+LG
Sbjct: 284 QMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRA 343
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR--LNEKSK 618
G ++EA I+ MPMEPD+ +W L++ CR N ELG+ + L+ L
Sbjct: 344 GLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMY 403
Query: 619 AGLVPVNASELAKEKENKKLASQN----LLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
L +++E +E + +N +E+ +H+++AGD SHPET IY ++ GL
Sbjct: 404 CSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLI 463
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+ K G++P T VL D+ E +EE L +HSE+LA+++ +L + IR+ KNLR C
Sbjct: 464 RRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCH 523
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH +KI+S+++ R +I+RD RFH F+ GLCSCRDYW
Sbjct: 524 DCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
T N I+ + D A VF M RD+ +W++MI G +N E+A+ F + +
Sbjct: 129 TANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSN 188
Query: 507 LKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
++PD F V + C+ LG ++V G++ + + ++ I+ S +++D+ G
Sbjct: 189 VEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNF-ILSS-----ALIDLYSKCG 242
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
++ A + + + DV VW ++N +HG
Sbjct: 243 RINTAKKVFNSIQHD-DVSVWNSMINGLAIHG 273
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 240/403 (59%), Gaps = 13/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DGLV+ G+ +EV ++ + + + TF ++ AC ALE + +H ++ +
Sbjct: 229 IDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGV 288
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ MYS C +D+A ++F + +D++++++MI G A +G +AV++FS+
Sbjct: 289 EVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSE 348
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ ++P+ F+GV +ACS G V G FESM +GI P ++HY +VD+LG G
Sbjct: 349 MLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVG 408
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
L+EA +FI +M +E D + L++ C++H N+ +G++ A+++ + R++ S L
Sbjct: 409 RLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSE--HYRIDSGSFIML 466
Query: 622 VPVNAS--------ELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALI 670
AS E+ ++ E + + + +EV + +HE+ +GD HPE +IY +
Sbjct: 467 SNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKL 526
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L K GY+P T LHDID E KE AL HSERLA+ +GL+S+ A +R+ KNL
Sbjct: 527 EELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNL 586
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
R+C DCH+ +K+I+KI R++++RD RFHHF++G CSC+DYW
Sbjct: 587 RICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 21/300 (7%)
Query: 333 QNPNEGQYQSY-SGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKV 391
QNPN Y S G + G + C+ + N L V + +
Sbjct: 86 QNPNVYLYTSLIDGFVSFGSYTDAINLFCQ----MVRKHVLADNYAVTAMLKACVLQRAL 141
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNG 450
EV GL+ K + +D +L++ G LE+A+ + + + P R V
Sbjct: 142 GSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGM-----PERDVVACTV 196
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ +C +++A VF+ M RD W +I G +NG +++F + + G++P+
Sbjct: 197 MIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPN 256
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ F+ V SAC+ LG + G M K G+ + ++++M G +DEA
Sbjct: 257 EVTFVCVLSACAQLGALELGRWIHAYMRK-CGVEVNRFVAGALINMYSRCGDIDEAQALF 315
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG-NLELGDRCAEIV-EQLDPS------RLNEKSKAGLV 622
+ + ++ DV + ++ +HG ++E + +E++ E++ P+ LN S GLV
Sbjct: 316 DGVRVK-DVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLV 374
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
+L++Y + + +D A +F ++ + ++I GF G DA+++F Q + + D
Sbjct: 65 LLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLAD 124
Query: 511 DQIFIGVFSAC---SALGD--VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ + AC ALG V G++ + D I + +V++ G G L++
Sbjct: 125 NYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIA------LKLVELYGKCGVLED 178
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
A + + MP E DV ++ C G +E
Sbjct: 179 ARKMFDGMP-ERDVVACTVMIGSCFDCGMVE 208
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 227/403 (56%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + G+ +EA+ + + +V T ++ AC L+ K VH +V
Sbjct: 1423 IAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGM 1482
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ + ++ MYS+C ++ A VF +M ER++ +W + ++G A NG+G + + +F +
Sbjct: 1483 QMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKR 1542
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ AG++P+ F+ V CS G V EG F+SM K YG+ P +HY +VD+ G G
Sbjct: 1543 MEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAG 1601
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG----DRCAEIVEQLDPSRLN--- 614
LD+A+ FI MPMEP VW L+N R+H +++LG D+ I + D + +
Sbjct: 1602 RLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSN 1661
Query: 615 ----EKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
++ G+ V + K K KK+ + +EV KVHE+ G HP ++I ++
Sbjct: 1662 IYAESQNWKGVSRVRG--MMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELML 1719
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +++ GY TR VL DI++E KE A+ HSE+LA++ GL+ P IRI+KNL
Sbjct: 1720 AEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNL 1779
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH +K++SK+ RE+++RD RFHHFK G CSCRDYW
Sbjct: 1780 RVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 1822
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ + +D A +F M +RD +W MI G+ G +A+ +F +
Sbjct: 1385 VVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLS 1444
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
AG + + V +AC+ +G + G +H+ S+ G+ S+K ++VDM G +
Sbjct: 1445 AGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSR--GMQMSIKLGTALVDMYSKCGAV 1502
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
A+E E M E +V W ++ M+G +G C ++ ++++
Sbjct: 1503 VTAMEVFESM-AERNVYTWTSAVSGLAMNG---MGTECLQLFKRME 1544
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 216/390 (55%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ + ++ + D + AC L+ K +H ++ R + V ++
Sbjct: 386 EALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLI 445
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C +++A VF M E+ +++W+ +I G A NG E ++++F+ K+ G P++
Sbjct: 446 DMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEI 505
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+GV AC +G V +G +F SM ++ I ++KHY +VD+LG G L EA E I+
Sbjct: 506 TFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDS 565
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKE 632
MPM PDV W L+ CR H + E+G+R + QL P + +
Sbjct: 566 MPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNV 625
Query: 633 KENKKLASQN---------LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
E + + +Q+ ++E VHE+ AGD +HP+ + I ++ + A++K GY+
Sbjct: 626 LEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYV 685
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P T V DID+E KE AL HSE+LAV+ GL++ PIR+ KNLR+C DCH+ +K+I
Sbjct: 686 PTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLI 745
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
SK R++++RD RFHHFK G CSC D+W
Sbjct: 746 SKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
L + ++N ++ Y C S+ DA +F +M E+D+ SW MI+G+A++ +A+ +F +
Sbjct: 335 LDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM 394
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD---YGIVPSMKHYVSIVDMLGS 559
+ G++PD+ + SAC+ L + G +S++ ++ S +++DM
Sbjct: 395 QLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILS----TTLIDMYMK 450
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
G ++ ALE M E V W ++ M+G++E
Sbjct: 451 CGCVENALEVFYAME-EKGVSTWNAVILGLAMNGSVE 486
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSECDSMDDAFS 466
+DL +++ L+ A +EEA+ V E + P R N ++ ++ ++ A
Sbjct: 169 LDLVSWNTLLAGYVQAGEVEEAERVFEGM-----PERNTIASNSMIALFGRKGCVEKARR 223
Query: 467 VFSNMT--ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F+ + ERD+ SW M++ + +N +GE+A+ +F + K +G+ D+ + + SACS +
Sbjct: 224 IFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRV 283
Query: 525 GDVVEG 530
+V G
Sbjct: 284 LNVEMG 289
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T+ L+Q C + E + +H H V N ++ +Y+ C S+ A VF
Sbjct: 107 TYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEES 166
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIF 499
DL SW+T++ G+ + G E+A +F
Sbjct: 167 PVLDLVSWNTLLAGYVQAGEVEEAERVF 194
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 234/401 (58%), Gaps = 10/401 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G +EA+ + + + +D TFS +++ C +LE AK H + R
Sbjct: 305 IAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGF 364
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + ++ +YS+ ++DA VF M +++ SW+ +I G+ +G G +AV++F +
Sbjct: 365 GLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFER 424
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
G+ P+ F+ V SACS G G FESMS+D+ I P HY ++++LG G
Sbjct: 425 MLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREG 484
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------LN 614
LDEA I+ P +P V++W L+ CR+H N ELG AE + + P + LN
Sbjct: 485 LLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLN 544
Query: 615 EKSKAGLVPVNASEL--AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ +G + A+ + K + + L + + +E++ + + + +GD H ++ +IY +
Sbjct: 545 IYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDE 604
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++ + GY+P+ +F+L D+D++ +E LL HSE+LA++ GL+++ P++I+++ R+
Sbjct: 605 LMLEISKHGYVPQXKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRI 663
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCHSA+K+I+ + RE+++RDA RFHHFKDG CSC DYW
Sbjct: 664 CGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GLV G EA + ++ + F +++A + + +H +
Sbjct: 204 IGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGV 263
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS+C S++DA VF M E+ W+++I G+A +G E+A+ ++ +
Sbjct: 264 GGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYE 323
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ +G+K D+ F + C+ L + + + +G + ++VD+ G
Sbjct: 324 MRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWG 382
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
+++A + MP +V W L+ +GN G E+ E++ L+E G+
Sbjct: 383 RIEDAKHVFDMMP-HKNVISWNALIA---GYGNHGRGVEAVEMFERM----LHE----GM 430
Query: 622 VPVNASELA 630
VP + + LA
Sbjct: 431 VPNHVTFLA 439
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 236/399 (59%), Gaps = 21/399 (5%)
Query: 390 KVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
K +EA+EV G + + + + +F+ + +C + +E K +H ++ L Y
Sbjct: 329 KHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKM--GLESGGYV 386
Query: 450 G--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
G ++ MYS+C + DA VF + E+++ SW+++I G A++G G A+ +F+Q + G+
Sbjct: 387 GGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGV 446
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
PD G+ SACS G + + F + + +++HY S+VD+LG G L+EA
Sbjct: 447 DPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAE 506
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA- 626
+ MPM+ + VW L++ CR H NL+L R A + +++P + S A ++ N
Sbjct: 507 AVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEP----DCSAAYVLLSNLY 562
Query: 627 ------SELA----KEKEN--KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+E+A K K N K + L ++ + H++ + D SHP +KIY + L
Sbjct: 563 ASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLG 622
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++KE GY+P+ +F LHD++ E KEE L HSERLA++ GLLS+ + I +MKNLRVCG
Sbjct: 623 VKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCG 682
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K+++KIV RE+++RD+ RFH FK+G+CSC DYW
Sbjct: 683 DCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y+ C M+ A VF + + + W ++TG+ N +A+++F + + + P+
Sbjct: 289 LVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPN 348
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ F ++C L D+ G + + + G+ S+V M GY+ +A+ ++
Sbjct: 349 ESSFTSALNSCCGLEDIERGKV-IHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAV-YV 406
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
K E +V W ++ C HG
Sbjct: 407 FKGINEKNVVSWNSVIVGCAQHG 429
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+ +N ++ Y +DDA +F M RD+ SW +MI G NG E A+ +F
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 505 AGLKPDDQIFIGVFSACSAL 524
+G+ + + SA + +
Sbjct: 241 SGVCLSSGVLVCGLSAAAKI 260
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S+D+A ++F + ++ + M+ +A+N +A+D+F + + + I G
Sbjct: 70 SLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKG--- 126
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PMEPD 578
C GD+V F+ M + ++ + ++VD L G + EA M PM+ D
Sbjct: 127 -CLHCGDIVTARKLFDEMPRR-----TVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180
Query: 579 VDVWEKLMN 587
V W +++
Sbjct: 181 VAAWNAMIH 189
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 228/408 (55%), Gaps = 23/408 (5%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +EG+ EA+ + L++ +D S ++ D L + K + +L S L
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
S N ++ MY +C +D+A F+ M +D+ SW +ITG+ K+GLG+ +V IF +
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ ++PD+ ++ V SACS G + EG F + + +GI P ++HY +VD+LG G L
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVP 623
EA I+ MP++P+V +W+ L++LCR+HG++ELG +I+ ++D K+ A V
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA-----KNPANYVM 521
Query: 624 V--------------NASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
+ NA EL K KK A + +E+ +VH +R+G+ SHP T I
Sbjct: 522 MSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQET 581
Query: 670 IRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR---APIR 725
++ +++ E GY+ + LHDID E KEE L AHSE+LA+ L + IR
Sbjct: 582 LKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIR 641
Query: 726 IMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ KNLRVC DCH +K +SKI ++RDA RFH F+DG CSC DYW
Sbjct: 642 VFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G +K ++ + + +Q I + TFS ++ACG ALE+ +H ++
Sbjct: 79 MSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF 138
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ V N ++ MYS+C +++A VF + +R L SW+ MI GF G G A+D F
Sbjct: 139 EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGM 198
Query: 502 FKQAGLK--PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
++A +K PD+ + ACS+ G + G +H + + S S+VD+
Sbjct: 199 MQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLM 586
GYL A + +++ E + W L+
Sbjct: 259 KCGYLFSARKAFDQIK-EKTMISWSSLI 285
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Query: 416 LMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERD 475
+++ C ++ VH ++ + S L + T N ++ MY +C A+ VF +M ER+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHF 534
+ SW +++G NG + ++ +FS+ + G+ P++ F AC L + +G+ +H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + ++ + + S+VDM G ++EA
Sbjct: 132 FCLKIGFEMMVEVGN--SLVDMYSKCGRINEA 161
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 237/405 (58%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G KEAIE+ ++ + + T ++ A A+E K VH E+
Sbjct: 227 MISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNE 286
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + ++ MYS+C S+D A VF + +++ +W +I G A +G DA+D F
Sbjct: 287 IEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHF 346
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +QAG+ P D ++IGV SACS G V EG + M G++P ++HY +VD+LG
Sbjct: 347 WRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGR 406
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR------- 612
G L+EA + I MP++PD + + L+ C+MHGN+E+G+R A+I+ P
Sbjct: 407 AGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVAL 466
Query: 613 ----LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
+E + G+V V KE + +K + +E+ +HE+ D SHP + I++
Sbjct: 467 SNMFASEGNWEGVVKVRLK--MKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHS 524
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
++ + +++ GY P T VL ++D++ K+ AL HSE++A++ GL+S+ + P++I+K
Sbjct: 525 MLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVK 584
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCHS++K++SKI R++I+RD KRFHHF++G CSC DYW
Sbjct: 585 NLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF------ 465
TF +++AC +EE K +H V +L + ++++Y C +M DA
Sbjct: 125 TFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQT 184
Query: 466 --------------------------SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+F +M + + SW+ MI+G A+NG ++A+++F
Sbjct: 185 RLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMF 244
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + P+ + V A S LG + G +H + + I + +++DM
Sbjct: 245 HDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGS--ALIDMYS 302
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D+A++ E + + + W ++ MHG
Sbjct: 303 KCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHG 337
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 227/381 (59%), Gaps = 21/381 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSEC-DSMDDAFSVFS 469
T ++ C D LE +++ + + + R V + ++ M ++C S+D+ +F+
Sbjct: 542 TLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFA 601
Query: 470 NMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ-AGLKPDDQIFIGVFSACSALGD 526
M + +DL +W+TMI +A++G G A+ +F +Q + ++PD F+ V S CS G
Sbjct: 602 RMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGL 661
Query: 527 VVEGMLHFESMSKDYGIVP-SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V +G+ F + GI ++HY +VD+LG GYL EA +FI KMP+ D VW L
Sbjct: 662 VEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 721
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS------------ELAKEK 633
+ C +G+LE G+R A +L R + L + A+ ++A+ +
Sbjct: 722 LGACSSYGDLEGGERAARAFIEL--YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 779
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
K++ ++ + V+++VHE+ A D SHP++D IYA + L+ ++EAGY+P+TR VLHD+
Sbjct: 780 VKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDV 839
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
++E KE+ L HSE+LA++ GL+S P R IR++KNLRVC DCH+A K I+++ RE+ +
Sbjct: 840 EEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAV 899
Query: 754 RDAKRFHHF-KDGLCSCRDYW 773
RD RFHHF KDG CSC DYW
Sbjct: 900 RDCNRFHHFGKDGECSCGDYW 920
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 398 LGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
L L+ + + LP +F ++ +CGD +L A+++H VE L V ++ M
Sbjct: 222 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 281
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y C S+D++ +VF M R+ SW+ MI FA+ G A I+ + +Q G +P+ F
Sbjct: 282 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 341
Query: 515 IGVF-SACSA----LGD--VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ +ACS+ LG+ + G + + D + ++V M GSTG +D A
Sbjct: 342 VTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV------GTALVTMYGSTGAIDRAR 395
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+ +P + V W ++
Sbjct: 396 AAFDAIPAKNIVS-WNAMLT 414
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 15/246 (6%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVST 447
G+ +EA+E+ +++Q ++ + ++ ++ C D + EA+++H E V L S
Sbjct: 420 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSI 476
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
NG+++M++ S+++A + F +D SW+T + + A+ F + G
Sbjct: 477 ANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGF 536
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG-YLDEA 566
+PD + V C+ LG + G + +S + + ++++M+ G +DE
Sbjct: 537 RPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDEC 596
Query: 567 LEFIEKMPME-PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR---------LNEK 616
+MP + D+ W ++ HG+ + I++Q R L+
Sbjct: 597 ERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGC 656
Query: 617 SKAGLV 622
S AGLV
Sbjct: 657 SHAGLV 662
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 408 VDLPTFSQLMQAC-GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ + T + L++ C GDA L + + +H + + N +++MYS+C S+DDA +
Sbjct: 22 IPIETLAGLLRRCIGDAD-LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANA 80
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK---QAGLKPDDQIFIGVFSACS- 522
FS + R + +W+T+I A D++++ K +A +P+ I V A +
Sbjct: 81 AFSALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIAS 137
Query: 523 --------------ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
A +V + + +D + ++ +D G G ++ ALE
Sbjct: 138 GDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATAL------LDAYGKCGCVESALE 191
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
++ + PD+ W + C GN E DR +V ++
Sbjct: 192 VFSRIQV-PDLICWNAAIMAC--AGNDERPDRALLLVRRM 228
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ MY ++D A + F + +++ SW+ M+T + NG +A+++F+ K+
Sbjct: 375 VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR 434
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS-IVDMLGSTGY 562
L P+ ++ V C DV E +H E + G+ + +V M +G
Sbjct: 435 QSLAPNKVSYLAVLGCCE---DVSEARSIHAEVVGN--GLFAQESSIANGVVRMFARSGS 489
Query: 563 LDEALEFIEKMPMEPDV 579
L+EA+ + ++ V
Sbjct: 490 LEEAVAAFDATVVKDSV 506
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 236/404 (58%), Gaps = 14/404 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L ++ G +E + + +E + + TF+ L+ AC AL +H + ++S
Sbjct: 302 LTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRI--VMS 359
Query: 442 PLR--VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ + N ++ MYS+ ++D +++VFSNM RD+ +W+ MI G++ +GLG+ A+ +F
Sbjct: 360 GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVF 419
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
AG P+ FIGV SAC L V EG +F+ + K + + P ++HY +V +LG
Sbjct: 420 QDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGR 479
Query: 560 TGYLDEALEFIEKMP-MEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------- 610
G LDEA F++ ++ DV W L+N C +H N LG + E V Q+DP
Sbjct: 480 AGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTL 539
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
S ++ K++ V +L KE+ KK + L++R+ H + + ++HPE+ +I+
Sbjct: 540 LSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEK 599
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
++ L A +K GY P+ VLHD++ E KE L HSE+LA+++GL+ P PIRI+KN
Sbjct: 600 VQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKN 659
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH A+K+ISK R +I+RDA RFHHF++GLC+C D+W
Sbjct: 660 LRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 112/239 (46%), Gaps = 22/239 (9%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPT 412
A Q+L+ +D F+ S L LV+ G EA +VL + +C+ D T
Sbjct: 182 AMQILDTVPGDDVFSYNS----------ILSALVESGCRGEAAQVLKRMVDECVIWDSVT 231
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
+ ++ C + L+ +H + + V + ++ Y +C + +A F +
Sbjct: 232 YVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLR 291
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL-----GDV 527
+R++ +W ++T + +NG E+ +++F++ + +P++ F + +AC++L GD+
Sbjct: 292 DRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDL 351
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G + K++ IV + ++++M +G +D + M M DV W ++
Sbjct: 352 LHGRIVMSGF-KNHLIVGN-----ALINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMI 403
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 110/243 (45%), Gaps = 9/243 (3%)
Query: 393 EAIEVLGLLEKQCISVDLP-----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVST 447
E +EVLGL + +S+D F+ ++ C D+ ++E K H ++ + L
Sbjct: 107 EVLEVLGLF-RNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYV 165
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
N ++ MYS C +D A + + D+ S++++++ ++G +A + + +
Sbjct: 166 KNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECV 225
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
D ++ V C+ + D+ G L + G+V + +++D G G + A
Sbjct: 226 IWDSVTYVSVLGLCAQIRDLQLG-LQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNAR 284
Query: 568 EFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS 627
+ + + + +V W ++ +G+ E +E L+ +R NE + A L+ AS
Sbjct: 285 KQFDGLR-DRNVVAWTAVLTAYLQNGHFEETLNLFTKME-LEDTRPNEFTFAVLLNACAS 342
Query: 628 ELA 630
+A
Sbjct: 343 LVA 345
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHV---ERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
L L++ AK+L K +H + + ++ N ++ +YS+C A
Sbjct: 23 LKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARK 82
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA-GLKPDDQIFIGVFSACSALG 525
+F M +R++ SW ++ G+ G + + +F P++ IF V S C+ G
Sbjct: 83 LFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSG 142
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMP 574
V EG + K G++ + YV +++ M ++D A++ ++ +P
Sbjct: 143 RVKEGKQCHGYLLKS-GLL--LHQYVKNALIHMYSRCFHVDSAMQILDTVP 190
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 49/377 (12%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I + TF+ L+ A+ + + +H + + N ++ MYS C +++ AF
Sbjct: 203 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 262
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
VF+ M +R++ SW +MITGFAK+G A+++F Q + G KP++ ++ V SACS +G
Sbjct: 263 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVAVLSACSHVG 322
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ EG HF SM K++GIVP M+HY +VD+LG +G L EA+EFI MP+ D VW L
Sbjct: 323 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 382
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENK 636
+ C +HGN ELG AE++ + +P S L+ + V + KE+
Sbjct: 383 LGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 442
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K A + +EV ++VH + G+TSHP+ +IY + L +++KE GYIP+T F
Sbjct: 443 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDF-------- 494
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
NLRVCGDCH+A+K IS GRE+++RD+
Sbjct: 495 --------------------------------NLRVCGDCHTAIKYISMATGREIVVRDS 522
Query: 757 KRFHHFKDGLCSCRDYW 773
RFHH K+G+CSC DYW
Sbjct: 523 NRFHHIKNGVCSCNDYW 539
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 227/399 (56%), Gaps = 11/399 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G A+E + + D T ++ ACG +LE + +++ + +
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N L M+ +C + + A +F M +R++ SW TMI G+A NG +A+ +F+ +
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESM--SKDYGIVPSMKHYVSIVDMLGSTGYL 563
GL+P+ F+GV SACS G V EG +F M S D + P +HY +VD+LG +G L
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLL 365
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEK 616
+EA EFI+KMP+EPD +W L+ C +H ++ LG + A+++ + P N
Sbjct: 366 EEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIY 425
Query: 617 SKAGLVPVNASELAKEKE--NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ AG +K ++ KK+A+ + +E K+H + GD SHP++ IY + +
Sbjct: 426 AAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEIL 485
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++++ GY+P+T V HD++ E KE +L HSE+LA++ GL+ PIR+MKNLR C
Sbjct: 486 KKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCD 545
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ K +S + E+I+RD RFHHF++G+CSC+++W
Sbjct: 546 DCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 6/183 (3%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
S+L++A ++ K +H V R + S +L+ M A VF M
Sbjct: 13 LSELLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMH 70
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM- 531
+ + W+T+ G+ +N L +++ ++ + + G++PD+ + V A S LGD G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
LH + +G + + +V M G L A E M ++ D+ W + +C
Sbjct: 131 LHAHVVKYGFGCLGIVA--TELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQ 187
Query: 592 HGN 594
GN
Sbjct: 188 TGN 190
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 218/375 (58%), Gaps = 15/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR--VSTYNGILKMYSECDSMDDAFSVFS 469
T ++ AC A++ + +H ++ + L + S ++ MY++C ++ A VF
Sbjct: 300 TMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFD 359
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+M R L+SW+ MI GFA +G A D+FS+ ++ G+ PDD F+G+ SACS G +
Sbjct: 360 SMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDL 419
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G F SMS+DY I P ++HY ++D+LG G EA E I MPMEPD +W L+ C
Sbjct: 420 GRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479
Query: 590 RMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKL 638
+MH N+ELG+ A+ + +++P N S L + A+ L +K KK
Sbjct: 480 KMHNNVELGESYAQNLIKIEPE--NPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKA 537
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+ +E+ S VHE+ GD HP +IY ++ + M+E G++P+T VL ++++E K
Sbjct: 538 PGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWK 597
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E AL HSE+LA++ GL+S+ + I+KNLRVC +CH A K+ISKI RE+I RD R
Sbjct: 598 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 657
Query: 759 FHHFKDGLCSCRDYW 773
H KDG+ SC DYW
Sbjct: 658 LHLLKDGVWSCHDYW 672
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ KEA+E+ + K + D T ++ AC + ++E + +H +E
Sbjct: 168 MISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG 227
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ N ++ +YS+C ++ A +F + ++D+ SW+T+I G L ++A+ +F
Sbjct: 228 FGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQ 287
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++G P+D + V AC+ LG + G +H + G+ + S++DM
Sbjct: 288 EMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAK 347
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A + + M + + W ++ MHG
Sbjct: 348 CGDIEAAKQVFDSM-LTRSLSSWNAMIFGFAMHG 380
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+F L+++C +KAL E + +H HV +L L + ++ MY++ ++DA VF
Sbjct: 67 SFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS 126
Query: 472 TER-------------------------------DLTSWDTMITGFAKNGLGEDAVDIFS 500
+ R D+ SW+ MI+G+ + ++A++++
Sbjct: 127 SHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYK 186
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +KPD+ + V SAC+ G + G S +D+G ++K ++D+
Sbjct: 187 DMMKTNVKPDESTMVTVVSACAQSGSIELGR-QLHSWIEDHGFGSNIKIVNVLIDLYSKC 245
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++ A + + + DV W L+
Sbjct: 246 GEVETACGLFQGLA-KKDVISWNTLI 270
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
D + A S+F + E +L W+TM G A N A+ ++ GL P+ F +
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 519 SACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+C+ ++EG +H + Y + M S++ M G L++A
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDL--DMYVNTSLISMYAQNGRLEDA 119
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 246/461 (53%), Gaps = 39/461 (8%)
Query: 340 YQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQ--------LDGLVKEGKV 391
Y SG++ N +A+ +++ EA R +G +E+ + G G
Sbjct: 228 YMRESGSVGNVFVATSLVDMYAKCGSMEEARRVF--DGMVEKDVVCWSALIQGYASNGMP 285
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALE---EAKAVHEHVERLLSPLRVSTY 448
KEA++V ++++ + D + AC ALE A+ + + E L +P+
Sbjct: 286 KEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPV---LG 342
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ Y++C S+ A VF M +D ++ +I+G A G A +F Q + G++
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+G+ C+ G V +G +F MS + + P+++HY +VD+ G L EA +
Sbjct: 403 PDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQD 462
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----------------SR 612
I MPME + VW L+ CR+H + +L + + + +L+P R
Sbjct: 463 LIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHR 522
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+E K + +S +K +KL + +EV VHE+ GDTSHP + KIY +
Sbjct: 523 WDEAEK-----IRSS--LNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLES 575
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++EAGY P T FVL D+++E KE L HSE+LAV+ L+S+ A+ IR++KNLRV
Sbjct: 576 LFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRV 635
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH A+K++SK+ GRE+I+RD RFHHF +G CSCRDYW
Sbjct: 636 CGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 384 GLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G ++ G EA+ + GLLE + D T +++ AC L + + ++ S
Sbjct: 177 GYIESGCFGEALGLFRGLLEMG-LRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSV 235
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
V ++ MY++C SM++A VF M E+D+ W +I G+A NG+ ++A+D+F +
Sbjct: 236 GNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEM 295
Query: 503 KQAGLKPDDQIFIGVFSACSALG 525
++ ++PD +GVFSACS LG
Sbjct: 296 QRENVRPDCYAMVGVFSACSRLG 318
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAK-ALEEAKAVHEHVERLL 440
+ G+V ++A+ V + + + D TF +++AC ++H V +
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V G++ +YS+ + DA VF + E+++ SW +I G+ ++G +A+ +F
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GL+PD + + ACS +GD+ G + ++ G V ++ S+VDM
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRW-IDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G ++EA + M +E DV W L+
Sbjct: 252 GSMEEARRVFDGM-VEKDVVCWSALI 276
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 424 KALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
K+L +AK H + RL L TY N +L+ + A VF+ ++ ++T
Sbjct: 14 KSLHQAKQCHCLLLRL--GLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDY 541
+I G N DAV +++ +Q G PD+ F V AC+ L L S+
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 542 GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G + +V + G+L +A + +++P E +V W ++
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP-EKNVVSWTAII 175
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 239/430 (55%), Gaps = 18/430 (4%)
Query: 356 VLNNCKHEDDFAEASRSSQNNGTLEQL-DGLVKEGKVKEAIEVLGLLEKQCISVDLPTFS 414
++++CK +D + + S N + L +GL +EG + + + D TF
Sbjct: 94 LISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEG-----LAYFNMSRWVGLKPDQATFL 148
Query: 415 QLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+++ C D + ++ +H + +L +Y++ ++D+ +VF +T
Sbjct: 149 AVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSP 208
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHF 534
D +W M+ +A +G G DA+ F GL PD F + +ACS G V EG +F
Sbjct: 209 DSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYF 268
Query: 535 ESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
E+MSK Y I P + HY +VD++G +G L +A I++MPMEP VW L+ CR++ +
Sbjct: 269 ETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 328
Query: 595 LELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASE---LAKEKENKKLASQNLL 644
+LG + A+ + +L+P N S +GL +AS L K+K + + + +
Sbjct: 329 TQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWK-DASRIRNLMKQKGLVRASGYSYI 387
Query: 645 EVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALL 703
E +K+H++ GD SHPE++KI ++ +R +MK E G+ T FVLHD+D++ KEE +
Sbjct: 388 EHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMIN 447
Query: 704 AHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFK 763
HSE++A++ GLL PI I KNLR+CGDCH K IS I R +IIRD+KRFHHF
Sbjct: 448 QHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFL 507
Query: 764 DGLCSCRDYW 773
+G CSCRDYW
Sbjct: 508 EGSCSCRDYW 517
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++ AC EE +H V + V N ++ +Y + + + +F ++
Sbjct: 45 TFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDL 104
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV---- 527
+ ++L SW+TMI +NGL E+ + F+ + GLKPD F+ V C +G V
Sbjct: 105 SVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQ 164
Query: 528 -VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL-DEALEFIEKMPMEPDVDVWEKL 585
+ G++ F + + I ++ +D+ G L D + F+E PD W +
Sbjct: 165 GIHGLIMFCGFNANTCITTAL------LDLYAKLGRLEDSSTVFLE--ITSPDSMAWTAM 216
Query: 586 MNLCRMHG 593
+ HG
Sbjct: 217 LAAYATHG 224
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGVFSACSALGDVV 528
M ERDL +W+++I+G+A G ++ S+ + G +P++ F+ + SAC G+
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG+ + G++ +K +++++ G TG L + + E + ++ V W ++ +
Sbjct: 61 EGVC-IHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVS-WNTMIVI 118
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 224/397 (56%), Gaps = 18/397 (4%)
Query: 390 KVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
K E +++ L + C +V P T ++QAC ALE K VH +V R +
Sbjct: 263 KALELFQIMML--EACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVL 320
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY C + VF M +RD+ SW+++I+ + +GLG+ A+ IF G+
Sbjct: 321 NTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVS 380
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
P FI V ACS G V E + FESM Y I P M+HY +VD+LG LDEA+E
Sbjct: 381 PSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIE 440
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKA 619
I+ M +P VW L+ CR+H N+EL +R + ++ +L+P S + KS+
Sbjct: 441 LIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRM 500
Query: 620 GLVPVNASELAKEKENK---KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
+ + K+ E++ K+ S + +EV+ K++ + + +P+ +++ A + L +
Sbjct: 501 W---NDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTE 557
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
+K GY+P+T V +D+D+E KE +L HS +LAV+ GL+++ IRI NLR+C DC
Sbjct: 558 IKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDC 617
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
H+ +K +SK RE+++RD RFH FKDG+CSC DYW
Sbjct: 618 HAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 14/247 (5%)
Query: 412 TFSQLMQACGDAK----ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
T++ +++AC ++ L + K +H H+ R V +L +Y+ + A SV
Sbjct: 177 TYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSV 236
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS--QFKQAGLKPDDQIFIGVFSACSALG 525
F M ++++ SW MI +AKN + A+++F + P+ + V AC++L
Sbjct: 237 FGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLA 296
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G ++H + + G+ ++ +++ M G G + + M + DV W
Sbjct: 297 ALEHGKLVHAYVLRR--GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNS 353
Query: 585 LMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLL 644
L+++ MHG LG + +I E + ++ + + A A E K+ +++L
Sbjct: 354 LISIYGMHG---LGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESML 410
Query: 645 EVRSKVH 651
+ ++H
Sbjct: 411 N-KYRIH 416
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 373 SQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP--TFSQLMQACGDAKALEEAK 430
S NN L Q L + G +K+A+++L C + TF L+ +C + +L +
Sbjct: 43 SNNNDDLIQ--SLCRGGNLKQAVQLL------CCEPNPTKKTFELLINSCIEQNSLSDGV 94
Query: 431 AVHEHVERLL-SPLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFA 487
VH RL+ S L Y ++ MY + S+D A VF E+ + W+ + A
Sbjct: 95 DVHH---RLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALA 151
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
GED + ++ Q G+ + + V AC
Sbjct: 152 MASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKAC 185
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 228/405 (56%), Gaps = 14/405 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
L GL + G ++A+++ ++++ ++ + T L+ C +L + + VH H R
Sbjct: 419 MLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHG 478
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSN-MTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ ++ MY++C + A +F+N +D+ ++MI G+ +G G A+ ++
Sbjct: 479 YAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVY 538
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S+ + LKP+ F+ + +ACS G V EG F SM +D+ + P KHY +VD+
Sbjct: 539 SRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSR 598
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G L+EA E +++MP +P DV E L++ CR H N +G + A+ + LD LN
Sbjct: 599 AGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLD--YLNSGIYV 656
Query: 620 GLVPVNASELAKEKEN-----------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + A E N KK+ +L+EV +KV+ + A D SHP IY
Sbjct: 657 MLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQ 716
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
L+ LR +++ GYIP+T VL D+++ K + L HSERLA++ GLLS+P + I+I K
Sbjct: 717 LLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITK 776
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLRVC DCH+ K ISKIV RE+I+RDA RFHHF +G CSC D+W
Sbjct: 777 NLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 26/318 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
+ G V+ G + E+ + L + D T L++ C LE + +H + R
Sbjct: 318 MISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKE 377
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L +ST I+ MYS+C ++ A VF M ++++ +W M+ G ++NG EDA+ +
Sbjct: 378 LESHLVLST--AIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKL 435
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
F Q ++ + + + + C+ LG + +G +H + Y + +++DM
Sbjct: 436 FCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITS--ALIDMY 493
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN--LELGDRCAEIVEQLDP----- 610
G + A + DV + ++ MHG+ LG I E+L P
Sbjct: 494 AKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTF 553
Query: 611 -SRLNEKSKAGLVPVNASELAKEKENKKLASQN-----LLEVRSKVHEYRAGD------T 658
S L S +GLV + + + + Q+ L+++ S+ D
Sbjct: 554 VSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMP 613
Query: 659 SHPETDKIYALIRGLRAQ 676
P TD + AL+ G R
Sbjct: 614 FQPSTDVLEALLSGCRTH 631
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V++G E+I++ + + T + L++ACG + + H +V L
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM 277
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V ++ MYS A VF +M R L SW+ MI+G+ +NG+ ++ +F +
Sbjct: 278 GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRR 337
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q+G D + + CS D+ G +LH + K+ + + +IVDM
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKE--LESHLVLSTAIVDMYSKC 395
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G + +A +M + +V W ++
Sbjct: 396 GAIKQATIVFGRMG-KKNVITWTAML 420
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ DA VF M E+D+ W+++I G+ + GL +++ +F + GL+P + A
Sbjct: 196 LADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKA 255
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM---LGSTGYLDEALEF 569
C G GM S G+ + S+VDM LG TG AL F
Sbjct: 256 CGQSGLKKVGMCA-HSYVLALGMGNDVFVLTSLVDMYSNLGDTG--SAALVF 304
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 234/400 (58%), Gaps = 14/400 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G EA+E+ L+++ + D + ++ A AL++ K +H + R L
Sbjct: 596 VHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEG 655
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S + ++ MY+ C +++ + +VF+ + +DL W +MI + +G G A+D+F + +
Sbjct: 656 SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 715
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ V ACS G + EG ESM +Y + P +HYV +VD+LG +L+E
Sbjct: 716 SIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEE 775
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A +F++ M +EP +VW L+ C++H N ELG+ A+ + ++DP N + + V
Sbjct: 776 AYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPE--NPGNYVLVSNVY 833
Query: 626 ASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
A+E K KK + +EV +KVH + A D SHP++ +IY+ + +
Sbjct: 834 AAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQIT 893
Query: 675 AQM-KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++ KE GY+ +T+FVLH+ +E K + L HSERLA+++G+L++P A +RI KNLRVC
Sbjct: 894 EKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVC 953
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+ K+ISK REL++RDA RFHHFK G+CSC D W
Sbjct: 954 GDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+ + G ++K ++ + TF +QAC D+ +++ +H V + + V
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY+ M +A ++F NM + D SW++M++GF +NGL +A+ + + + AG K
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG---STGYLD 564
PD I + +A + G+ + GM +H +M G+ ++ S+VDM S Y+D
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKN--GLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+KMP + DV W ++
Sbjct: 475 ---CIFDKMP-DKDVVSWTTII 492
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 13/217 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
+ G + G A+E+ ++ + I +D+ S ++ AC K + K +H ++ R L
Sbjct: 492 IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL 551
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S L + NGI+ +Y EC ++D A +F + +D+ SW +MI+ + NGL +A+++F
Sbjct: 552 SDLVLQ--NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 609
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K+ G++PD + + SA ++L + +G +H + K + + S+ ++VDM
Sbjct: 610 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS--TLVDMYAR 667
Query: 560 TGYLDEA---LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+++ FI D+ +W ++N MHG
Sbjct: 668 CGTLEKSRNVFNFIRN----KDLVLWTSMINAYGMHG 700
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 382 LDGLVKEGKVKEAIEVLG-LLEKQC---ISVDLPTFSQLMQACGDAKALEEAKAVHEHV- 436
L + K G V EA + L L Q S+D +S +++ CG KAL E + VH H+
Sbjct: 83 LREICKRGSVNEAFQSLTDLFANQSPSQFSLD-EAYSSVLELCGSKKALSEGQQVHAHMI 141
Query: 437 --ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
L + + +ST ++ MY +C + DA +F M + + +W+ MI + NG
Sbjct: 142 TSNALFNSVFLSTR--LVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 199
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSI 553
+++++ + + +G+ D F + AC L D G +H ++ + Y + + + SI
Sbjct: 200 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVAN--SI 257
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V M L+ A + ++MP + DV W +++
Sbjct: 258 VGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 291
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I +D TF +++ACG K VH + V N I+ MY++C+ ++ A
Sbjct: 212 IPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271
Query: 466 SVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F M E+ D+ SW++MI+ ++ NG +A+ +F + ++A L P+ F+ AC
Sbjct: 272 QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS 331
Query: 525 GDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ +GM +H + Y I + + +++ M G + EA M + D W
Sbjct: 332 SFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWN 388
Query: 584 KLMN 587
+++
Sbjct: 389 SMLS 392
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
L G V+ G EA++ + DL ++ A + +H + +
Sbjct: 390 MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNG 449
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L+V N ++ MY++ SM +F M ++D+ SW T+I G A+NG A+++
Sbjct: 450 LDSDLQVG--NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 507
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV---SIVD 555
F + + G+ D + + ACS L ++ + S Y I + V IVD
Sbjct: 508 FREVQLEGIDLDVMMISSILLACSGL-KLISSVKEIHS----YIIRKGLSDLVLQNGIVD 562
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
+ G G +D A E + + DV W +++ C +H L
Sbjct: 563 VYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVHNGL 600
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 225/404 (55%), Gaps = 14/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G+ +EA+ + + +V T ++ AC L+ K VH +V
Sbjct: 217 MIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRG 276
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+C ++ A VF +M ER++ +W + ++G A NG+G + + +F
Sbjct: 277 MQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFK 336
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + AG++P+ F+ V CS G V EG F+SM K YG+ P +HY +VD+ G
Sbjct: 337 RMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRA 395
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LD+A+ FI MPMEP VW L+N R+H +++LG + + ++ N+ +
Sbjct: 396 GRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVDLGKYALDKLLAIESE--NDAAHVQ 453
Query: 621 LVPVNASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + A + K K KK+ + +EV KVHE+ G HP ++I +
Sbjct: 454 LSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELM 513
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GY TR VL DI++E KE A+ HSE+LA++ GL+ P IRI+KN
Sbjct: 514 LAEMDRRLRLQGYTANTREVLFDIEEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKN 573
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVC DCH +K++SK+ RE+++RD RFHHFK G CSCRDYW
Sbjct: 574 LRVCMDCHRYIKLVSKVFNREIVMRDRNRFHHFKGGECSCRDYW 617
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D A +F M +RD +W MI G+ G +A+ +F + AG + + V +A
Sbjct: 196 VDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSVLTA 255
Query: 521 CSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
C+ +G + G +H+ S+ G+ S+K ++VDM G + A+E E M E +V
Sbjct: 256 CAQIGTLDRGKWVHWYVRSR--GMQMSIKLGTALVDMYSKCGAVVTAMEVFESMA-ERNV 312
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLD 609
W ++ M+G +G C ++ ++++
Sbjct: 313 YTWTSAVSGLAMNG---MGTECLQLFKRME 339
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 228/376 (60%), Gaps = 14/376 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++G+ + A+ +L ++++ T+S + AC ALE+ K VH H+ + S
Sbjct: 262 ISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK--S 319
Query: 442 PLRVSTY--NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L++ + N +L MY++ S+DDA VF + + D+ SW+TM+TG A++GLG++ +D F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
Q + G++P++ F+ V +ACS G + EG+ +FE M K Y + P + HYV+ VD+LG
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGR 438
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP----SRL-- 613
G LD A FI +MP+EP VW L+ CRMH N+ELG AE +LDP R+
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498
Query: 614 -NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
N + AG ++ KE KK + + +E+ + VH + A D +HP+ +I
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKW 558
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ ++KE GY+P+T VL +DQ+ +EE L HSE+LA++ LL++P +PIRI KN+
Sbjct: 559 EEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNI 618
Query: 731 RVCGDCHSALKIISKI 746
RVCGDCH+A+K +SKI
Sbjct: 619 RVCGDCHAAIKFVSKI 634
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S L++A G L+ +H + V + ++ MY+ C MD A F M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
+ SW+ +I+G A+ G GE A+ + + ++ +P + VFSAC+++G + +G
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + ++ + + +++DM G +D+A +++ ++PDV W ++ C
Sbjct: 311 WVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCA 367
Query: 591 MHGNLELGDRCAEIVEQL 608
HG LG + EQ+
Sbjct: 368 QHG---LGKETLDRFEQM 382
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEH-VERLLSPLRVSTYNGILKMYS 456
L L+++ + D +S+L++ C +E+ + VH H V+ + N I+ MY+
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 457 ECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIG 516
+C +DDA +F M +D+ +W +I GF++N DA+ +F Q + GL+P+
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSS 194
Query: 517 VFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPME 576
+ A + + G + YG S+ ++VDM G++D A + MP +
Sbjct: 195 LLKASGSEHGLDPGT-QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 577 PDVDVWEKLMN 587
+V W L++
Sbjct: 254 SEVS-WNALIS 263
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 226/395 (57%), Gaps = 16/395 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+A+ + ++C++ D FS +++AC A V HV ++ + N +
Sbjct: 350 KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANAL 409
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ + C S+ + VF M RD SW++M+ +A +G G++A+ +FSQ +PD
Sbjct: 410 IHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA---QPDG 466
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
F+ + SACS G EG FE+MS ++GIVP + HY +VD+LG G + EA E I+
Sbjct: 467 ATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELID 526
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-SRLNEKSKAGLVPVN----- 625
KMPMEPD VW L+ CR HG +L A +++LDP + L + + +
Sbjct: 527 KMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNE 586
Query: 626 ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A + +E E K + + + +EV ++VHE+ +G HPE + I A + L ++K+ GY
Sbjct: 587 ARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGY 646
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA----PIRIMKNLRVCGDCHS 738
+P+ LHDI+ E KEE L HSE+LA++ L++ + I+IMKN+R+C DCH+
Sbjct: 647 VPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHN 706
Query: 739 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K+ S++V E+++RD+ RFHHFK +CSC DYW
Sbjct: 707 FMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSE-CDSMDDAFSVF 468
F+ ++ ACG ++ H L + Y N ++ MY + C D+A++V+
Sbjct: 167 AFASVISACGG----DDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVY 222
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M R+L SW++MI GF G G A+++FSQ G++ D + +FS +GD +
Sbjct: 223 EAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGL 282
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
E + ++ G + ++ ++V S G
Sbjct: 283 ECCFQLQCLTIKTGFILKIEVATALVKAYSSLG 315
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 369 ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLP--------TFSQLMQAC 420
S +S+ L + L G ++EA+++ S+ P T++ L QAC
Sbjct: 21 VSLNSEAINLLHHIRLLCSRGHLQEALKLF-------YSITPPPPLVHSHHTYAALFQAC 73
Query: 421 GDAKALEEAKAVHEHVERLLSP---LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
+L E +A+H H+ L +P + N ++ MY++C S+D A +F M E+++
Sbjct: 74 ARRSSLPEGQALHRHM-FLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIV 132
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
SW +++G+A++G + +F +P + F V SAC
Sbjct: 133 SWTALVSGYAQHGRSNECFRVFRGM-LIWHQPTEFAFASVISAC 175
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 210/377 (55%), Gaps = 16/377 (4%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERL--LSPLRVSTYNGILKMYSECDSMDDAFS 466
D ++S L A AL + +H HV + + R+S+ ++ MY +C SM DA+
Sbjct: 399 DEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISS--SLVTMYGKCGSMLDAYQ 456
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF E ++ W MIT F ++G +A+ +F + G+ P+ F+ V SACS G
Sbjct: 457 VFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGK 516
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ +G +F SM+ + I P ++HY +VD+LG G L+EA FIE MP EPD VW L+
Sbjct: 517 IDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALL 576
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQN---- 642
C H N+E+G AE + +L+P + + L + E ++L N
Sbjct: 577 GACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRK 636
Query: 643 -----LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG 697
++V+++ + A D SH T +IY +++ L+ +K GY+ ET+F + + EG
Sbjct: 637 ESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSV--EG 694
Query: 698 KEE-ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
EE +L HSE+LA++ GLL P +P+RI KNLR CGDCH+ +K S+I RE+I+RD
Sbjct: 695 SEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDI 754
Query: 757 KRFHHFKDGLCSCRDYW 773
RFH F +G CSC DYW
Sbjct: 755 NRFHRFTNGSCSCMDYW 771
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TFS ++ AC A L E + +H + + L+ V+T +L MY++C SM A +VF
Sbjct: 202 TFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVAT--ALLDMYAKCGSMLLAENVFD 259
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M R+L SW++MI GF KN L A+ +F + G PD V SAC+ L ++
Sbjct: 260 EMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDF 317
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
G S+ K G+V + S+VDM G ++A + + DV W ++ C
Sbjct: 318 GKQVHGSIVKR-GLVGLVYVKNSLVDMYCKCGLFEDATKLFCG-GGDRDVVTWNVMIMGC 375
Query: 590 RMHGNLELGDRC----AEIVEQLDPSRLNEKSKAGLVPVNASELA 630
N E C A I E ++P +E S + L +AS A
Sbjct: 376 FRCRNFE--QACTYFQAMIREGVEP---DEASYSSLFHASASIAA 415
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERL 439
+ G VK AI V E + D + S ++ AC L+ K VH V+R
Sbjct: 272 MIVGFVKNKLYGRAIGVFR--EVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRG 329
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L L V N ++ MY +C +DA +F +RD+ +W+ MI G + E A F
Sbjct: 330 LVGL-VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYF 388
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ G++PD+ + +F A +++ + +G M+H + G V + + S+V M G
Sbjct: 389 QAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKT--GHVKNSRISSSLVTMYG 446
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSK 618
G + +A + + E +V W ++ + HG CA +L LNE
Sbjct: 447 KCGSMLDAYQVFRETK-EHNVVCWTAMITVFHQHG-------CANEAIKLFEEMLNE--- 495
Query: 619 AGLVP 623
G+VP
Sbjct: 496 -GVVP 499
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
+P L+ K+L+ A +H + + ++ N +L +Y++C S+ +F
Sbjct: 96 SVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLF 155
Query: 469 SNMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+ ++ +W T+I +++ A+ F++ + G+ P+ F + AC+
Sbjct: 156 NTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAAL 215
Query: 527 VVEG-----MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
+ EG ++H D + ++ +DM G + A ++MP
Sbjct: 216 LSEGQQIHALIHKHCFLNDPFVATAL------LDMYAKCGSMLLAENVFDEMP 262
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 212/377 (56%), Gaps = 15/377 (3%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T ++ C + K +H ++ + V N +++MYS+C S+++ VF
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M E+D+ +W +I+ F G G+ A+ F + +G+ PD FI ACS G V
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
EG+ F+ M DY + P M+HY +VD+L +G L +A EFI MPM+PD +W L++
Sbjct: 642 EGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
Query: 589 CRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK------------EKENK 636
CR GN + R ++ + +L+ ++ LV + L K K K
Sbjct: 702 CRARGNTNIAQRVSKKILELNS---DDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLK 758
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +E++ +V+ +R GD S + DK+ L+ L M + GY+ + +F LHD++++
Sbjct: 759 KEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEED 818
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
K + L HSERLA++ GLL++ +P+ +MKNLRVCGDCH+ K I+KI+ RE+++RDA
Sbjct: 819 DKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDA 878
Query: 757 KRFHHFKDGLCSCRDYW 773
RFH FKDG CSC D+W
Sbjct: 879 NRFHRFKDGACSCGDHW 895
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF ++ +C LE VHEH + + N ++ MYS +D+A VF
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M+ RD SW+++I+G+ NG EDA+D++ +F+ G+ PD V AC +L V
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVK 239
Query: 529 EGM 531
EG+
Sbjct: 240 EGV 242
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 343 YSGNIQNGMMASQV-LNNCKHEDDFAEAS-RSSQNNGTLEQLDGLVKEGKVKEAIEVLGL 400
Y GN M + V L+N ++ F E S R S + +L + G G ++A+++
Sbjct: 157 YIGNALIDMYSRFVDLDNARYV--FEEMSNRDSVSWNSL--ISGYCSNGFWEDALDMYHK 212
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
+ D T S ++ ACG A++E AVH +E++ V NG+L MY + +
Sbjct: 213 FRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFER 272
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ +A VFS M +D +W+TMI G+A+ G E +V +F G PD A
Sbjct: 273 LREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRA 331
Query: 521 CSALGDVVEG 530
C GD+ G
Sbjct: 332 CGQSGDLQVG 341
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
++G + G KE +E +++ + D TF L+ + + + +H V +
Sbjct: 395 INGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ N +L +Y++C MDD VFS M+ D+ SW+T+I + ++
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513
Query: 502 FKQAGLKPDDQIFIGVFSACSAL-----GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDM 556
+ GL PD+ +G+ CS L G + G + F+S G ++ ++++M
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYI-FKS-----GFESNVPIGNALIEM 567
Query: 557 LGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+ ++ + M E DV W L++ M+G
Sbjct: 568 YSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYG 603
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 111/233 (47%), Gaps = 11/233 (4%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D+ + + ++ACG + L+ K VH+++ N ++ MY++C + A VF
Sbjct: 321 DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF 380
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+D +W+++I G+ ++G ++ ++ F K KPD F+ + S S L D+
Sbjct: 381 DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADIN 439
Query: 529 EGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+G +H + + +G + S++D+ G +D+ L+ M D+ W ++
Sbjct: 440 QGRGIHCDVIK--FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIA 496
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSRL--NEKSKAGLVPVNASELAKEKENKKL 638
+ +G +++ ++ L +E + G++P+ S LA ++ K++
Sbjct: 497 SSVHFDDCTVG---FQMINEMRTEGLMPDEATVLGILPM-CSLLAVRRQGKEI 545
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT- 472
S L++ AK + + VH + L V ++ Y++ + SVF +++
Sbjct: 23 SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
++ W+++I NGL A+ +++ ++ L+PD F V ++C+ + D+ G +
Sbjct: 83 TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
E + + G + +++DM LD A E+M V W L++
Sbjct: 143 VHEH-AMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVS-WNSLIS 195
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 224/400 (56%), Gaps = 10/400 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G VK +A+ + + ++ + + T S ++ C + AL K +H+ +LL
Sbjct: 214 GYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLS 273
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
++ ++ MY +C + A +F M RD+ +W+ MI+G+A++G G++A+++F +
Sbjct: 274 RNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERM 333
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
K G++P+ F+ V +AC G G+ FE M + YGI P + HY +VD+L G
Sbjct: 334 KDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGK 393
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
L+ A++FI MP EP + L+ CR++ NLE + A + + DP + +
Sbjct: 394 LERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANI 453
Query: 623 PVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A++ K+ K + +E++ +HE+R+ D HP+ I+ + L
Sbjct: 454 YAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQL 513
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+MKE GY+P+ FVLHD+D+ K + L+ HSE+LA++ GL+S+ +RI KNLRVC
Sbjct: 514 AERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVC 573
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K+IS I RE+I+RD RFHHF+ G CSC DYW
Sbjct: 574 GDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F +RS + + + V+ G + A E ++ + T++ L+ G A+A
Sbjct: 8 FLAIARSRARSLSTAAVAAAVRHGDLAGAEEAFVSTPRKTTA----TYNCLLA--GYARA 61
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
+R+ +P V +YN +L + D A +F++M RD+ SW+TM++G
Sbjct: 62 PGRLADARHLFDRIPTP-DVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSG 120
Query: 486 FAKNGLGEDAVDIF----------------------------SQFKQAGLKPDDQIFIGV 517
+K+G E+A +F F+ A K D ++ +
Sbjct: 121 LSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAM 180
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
S +G+VV+ + +FE+M V ++ + ++V + D+AL M E
Sbjct: 181 VSGYMDIGNVVKAIKYFEAMP-----VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 235
Query: 578 DV 579
+V
Sbjct: 236 NV 237
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAG 506
+ ++ Y + ++ A F M R+L SW+ ++ G+ KN +DA+ +F + ++A
Sbjct: 177 WTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREAN 236
Query: 507 LKPDDQIFIGVFSACSAL 524
++P+ V CS L
Sbjct: 237 VQPNASTLSSVLLGCSNL 254
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 211/373 (56%), Gaps = 13/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T++ + +C AL A+ V + + N ++ MYS+ S++DA VF +M
Sbjct: 312 TYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISM 371
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
RD+ SW+ +ITG+A +GL + ++ F A + P F+GV SAC+ LG V E
Sbjct: 372 PLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAF 431
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRM 591
+ +M K+ GI P +HY +V +L G LDEA FI + DV W L+N C++
Sbjct: 432 YYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQV 491
Query: 592 HGNLELGDRCAEIVEQLDPSRL-------NEKSKA----GLVPVNASELAKEKENKKLAS 640
+ N LG R AE + QL+PS + N +KA G+V V +E+ +K
Sbjct: 492 YKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKH--MRERAVRKSPG 549
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ + V S VH + + + HP+ D+I + L Q+K GY+P VLHDID E KEE
Sbjct: 550 VSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEE 609
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L+ HSE+LA++ GL+ +P A I IMKNLR+C DCH A+K+IS + R++++RDA RFH
Sbjct: 610 HLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFH 669
Query: 761 HFKDGLCSCRDYW 773
+ G+CSC DYW
Sbjct: 670 CIEGGICSCNDYW 682
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 28/249 (11%)
Query: 353 ASQVLNNCKHEDDFAEASRSSQNNGTLE--QLDGLVKEGKVKEAIEVLGLLEKQCISVDL 410
AS+V + D FA +S NG L+ QLDG G V+ + G EK D
Sbjct: 162 ASKVFESVSGFDAFA---FNSMINGYLDRGQLDG--SLGIVRN---MTGEAEKW----DY 209
Query: 411 PTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVF 468
++ ++ C K + H + L L ++ Y G ++ MY +CD + DA F
Sbjct: 210 VSYVAVLGHCASMK--DSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAF 267
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
+ E+++ SW ++T + +N L EDA+ +F + G++P++ + ++C+ L +
Sbjct: 268 EVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALR 327
Query: 529 EGMLHFESMSK----DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
G + K D+ +V + ++++M +G +++A MP+ DV W
Sbjct: 328 TGNALGACVMKTGHWDHLLVSN-----ALMNMYSKSGSIEDAHRVFISMPLR-DVVSWNL 381
Query: 585 LMNLCRMHG 593
++ HG
Sbjct: 382 IITGYAHHG 390
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G G+ KE++++L +++ ++ S + A + ++ + + H + +
Sbjct: 83 MSGYASSGRHKESLQLLRVVD---FGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ +N +L MY +C M+DA VF +++ D ++++MI G+ G + ++ I
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLG 558
K D ++ V C+++ D V G +H +++ K + YV ++VDM G
Sbjct: 200 MTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRL----ELNVYVGSALVDMYG 255
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMN 587
++ +A E +P E +V W +M
Sbjct: 256 KCDHVHDANRAFEVLP-EKNVVSWTAVMT 283
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 236/411 (57%), Gaps = 27/411 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V GK ++ ++ L+ ++ + VD+ T + ++ AC +A LE + VH + ++
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKI- 668
Query: 441 SPLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
R+ Y G ++ MYS+ S+DDA+++F E ++ W +MI+G A +G G+ A+ +
Sbjct: 669 -GHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICL 727
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
F + G+ P++ F+GV +AC G + EG +F M Y I P ++H S+VD+ G
Sbjct: 728 FEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYG 787
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS------- 611
G+L E FI + + VW+ ++ CR+H N+E+G +E++ Q+ PS
Sbjct: 788 RAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVL 847
Query: 612 ---------RLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPE 662
R +E ++ L ++ KK Q+ ++++ ++H + GD SHP+
Sbjct: 848 LSNMCASNHRWDEAAR-------VRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQ 900
Query: 663 TDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARA 722
++IY+ + L ++KE GY + + V+ D+++E E + HSE+LAV G++++ R
Sbjct: 901 DEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRT 960
Query: 723 PIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
PIRI+KNLR+C DCH+ +K S+++ RE+I+RD RFHHFK G CSC DYW
Sbjct: 961 PIRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+DGL++ G ++A+E L + + + TFS + +E + +H V +
Sbjct: 494 VDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGF 553
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNM----------------TERDLTSWDTMITG 485
+ +++MY +C MD+A V ++ + + SW M++G
Sbjct: 554 CRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSG 613
Query: 486 FAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ NG ED + F + + D + + SAC+ G ++E H + + G
Sbjct: 614 YVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAG-ILEFGRHVHAYNHKIG--H 670
Query: 546 SMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
+ YV S++DM +G LD+A I + EP++ W +++ C +HG
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAWT-IFRQTNEPNIVFWTSMISGCALHG 719
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S L + C L+ K VH + R V N IL +Y +C + A VF M
Sbjct: 392 TLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELM 451
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
E D+ SW+ MI+ + + G E ++D+F +
Sbjct: 452 NEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L +Y + +MD A +F + +R+ +W +I+GF++ G E +F + + G
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGAC 387
Query: 509 PDDQIFIGVFSACS 522
P+ +F CS
Sbjct: 388 PNQYTLSSLFKCCS 401
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 228/401 (56%), Gaps = 14/401 (3%)
Query: 384 GLVKEGKVKEAIEVL--GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
G + G+ +EA+ + LLE + V+ T S +++ CG A LE K +H +
Sbjct: 230 GYTQLGEHEEAMRLFKEALLEG--LDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSY 287
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L + ++ +YS+C ++ A+ VF + ++L W+ M+ A++ ++A D+F++
Sbjct: 288 DLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTK 347
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ AG++P+ F+ V ACS G V EG +F M K Y I P +HY S+VD+LG G
Sbjct: 348 MENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAG 406
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L EAL I+ MP EP VW + CR+HGN +L A+ V +L N
Sbjct: 407 KLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSN 466
Query: 615 EKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ AG A ++ +++ KK + +E ++VH++ AGD H +IY +
Sbjct: 467 AYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLED 526
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L +M+ AGY+ +T FVL ++ E K + + HSERLA++ GL+S P PIRIMKNLRV
Sbjct: 527 LGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRV 586
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CGDCH+A+K ISK+ GR +I+RD RFH F+DG CSC DYW
Sbjct: 587 CGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
F +AC + K+VH V + + V + ++ MY++C + +A +VF M
Sbjct: 157 IFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEM 216
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-----LGD 526
R++ SW MI G+ + G E+A+ +F + GL +D V C + LG
Sbjct: 217 PHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGK 276
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G L F++ G V S S++ + G ++ A +++P++ ++ +W ++
Sbjct: 277 QIHG-LCFKTSYDLSGFVGS-----SLISLYSKCGLIEGAYRVFDEVPIK-NLGMWNAML 329
Query: 587 NLCRMHGN 594
C H +
Sbjct: 330 IACAQHAH 337
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 423 AKALEEAKAVHEHVERLLSPLRVS--TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
+++L + + +H H+ + S L+V + ++ YS+ + VF + T+W
Sbjct: 67 SRSLLKGQQIHAHIIK--SGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWS 124
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSK 539
++I+ FA+N A+ F + L PDD IF AC+ LG V +H +
Sbjct: 125 SVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKT 184
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
Y + + S+VDM G + EA ++MP +V W + ++G +LG
Sbjct: 185 GYDVDVFVGS--SLVDMYAKCGDIKEARNVFDEMP-HRNVVSWSGM-----IYGYTQLG- 235
Query: 600 RCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVH 651
E + RL + +A L ++ ++ + S LLE+ ++H
Sbjct: 236 ------EHEEAMRLFK--EALLEGLDVNDFTLSSVIRVCGSATLLELGKQIH 279
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 225/388 (57%), Gaps = 25/388 (6%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSM 461
Q + D F ++ AC D ALE+ K V E L S V T ++ +Y +C +
Sbjct: 362 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGT--AVVNLYGKCGEI 419
Query: 462 DDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++A +F + R D+ W+ MI +A+ G +A+ +F + + G++PD F+ + A
Sbjct: 420 EEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 479
Query: 521 CSALGDVVEGMLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
CS G +G +F SM+ +Y + +++H+ + D+LG G L EA EF+EK+P++PD
Sbjct: 480 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDA 539
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN--ASELAK----EK 633
W L+ CR H +L+ R E+ +L RL + G V ++ +EL K K
Sbjct: 540 VAWTSLLAACRNHRDLK---RAKEVANKL--LRLEPRCATGYVALSNIYAELQKWHAVAK 594
Query: 634 ENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
K +A Q + +E+ +H++ GD +HP +I + L +QMKE GY+P+
Sbjct: 595 VRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPD 654
Query: 686 TRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISK 745
T+ VLH +D++ KE L +HSERLA++ GL+S+P P+R+ KNLRVC DCH+A K+ISK
Sbjct: 655 TKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISK 714
Query: 746 IVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I GR++++RD RFH FKDG CSC+DYW
Sbjct: 715 IAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
K+AI+ L ++ + D T+ L+ AC A+ + + +H+ + V N +
Sbjct: 245 KDAIQ---LYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 301
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA------ 505
+ MY++C S +A +VF M +R + SW T+I+ + + L +A +F Q +
Sbjct: 302 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 361
Query: 506 -GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+KPD F+ + +AC+ + + +G + E + G+ ++V++ G G ++
Sbjct: 362 QRVKPDALAFVTILNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVVNLYGKCGEIE 420
Query: 565 EALEFIEKMPMEPDVDVWEKLMNL 588
EA + + PDV +W ++ +
Sbjct: 421 EARRIFDAVCSRPDVQLWNAMIAV 444
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G V EA+ + I ++ AC +++ + +H + +
Sbjct: 139 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVA 198
Query: 449 NGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY C ++++A VF M E RD+ SW+ M++ + N G+DA+ ++ + +
Sbjct: 199 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ--- 255
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLH 533
L+PD ++ + SACS+ DV G +LH
Sbjct: 256 LRPDKVTYVSLLSACSSAEDVGLGRVLH 283
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 367 AEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGD 422
A+A+ + L GLV G+ KE + L + + + D TF + +CGD
Sbjct: 11 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGD 70
Query: 423 AKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RDLTSW 479
++L + +H+ V RL +VS N +L MY +C S+ A VF+ M R++ SW
Sbjct: 71 PESLRDGIRIHQMVVDSRLEIDPKVS--NALLNMYKKCGSLSHAKRVFAKMERTRNVISW 128
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMS 538
M A +G +A+ F G+K + + SACS+ V +G M+H S
Sbjct: 129 SIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIH--SCI 186
Query: 539 KDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PMEPDVDVWEKLMN 587
G + +++ M G G ++EA + + M DV W +++
Sbjct: 187 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
MY+ CDS DA + F + +R+L SW ++ FA +G ++ + + +Q G++PD
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 514 FIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
FI +C + +G+ +H + I P + + ++++M G L A K
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAK 118
Query: 573 MPMEPDVDVWEKLMNLCRMHGNL 595
M +V W + +HGN+
Sbjct: 119 MERTRNVISWSIMAGAHALHGNV 141
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 240/453 (52%), Gaps = 14/453 (3%)
Query: 331 YQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGK 390
++ P +G ++ + M V+ ++ + + S N + G VK
Sbjct: 165 FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWN----AVVAGYVKNSH 220
Query: 391 VKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A+ + + ++ + + T S ++ C + AL K +H+ +L ++
Sbjct: 221 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGT 280
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY +C + A +F M RD+ +W+ MI+G+A++G G++A+++F + K G++P
Sbjct: 281 SLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP 340
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ F+ V +AC G G+ FE M + YGI P + HY +VD+L G L+ A++
Sbjct: 341 NWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDL 400
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL 629
I MP EP + L+ CR++ NLE + A + + DP + + A++
Sbjct: 401 IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQW 460
Query: 630 ---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
K+ K + +E++ +HE+R+ D HP+ I+ + L +MK
Sbjct: 461 DDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAM 520
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+ FVLHD+D+ K + L+ HSE+LA+S GL+S+ +RI KNLRVCGDCH+A
Sbjct: 521 GYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAA 580
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISKI RE+I+RD RFHHF+ G CSC DYW
Sbjct: 581 KVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F ++RS + + + V+ G + A E ++ + T++ L+ G A+A
Sbjct: 8 FLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTA----TYNCLLA--GYARA 61
Query: 426 LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITG 485
L +R+ +P VS YN +L + D A +F++M RD+ SW+TM++G
Sbjct: 62 LGRLADARHLFDRIPTPDAVS-YNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSG 120
Query: 486 FAKNGLGEDAVDIF----------------------------SQFKQAGLKPDDQIFIGV 517
+K+G E+A +F F+ A K D ++ +
Sbjct: 121 LSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAM 180
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
S +G+VV+ + +FE+M V ++ + ++V + D+AL M E
Sbjct: 181 VSGYMDIGNVVKAIEYFEAMP-----VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREA 235
Query: 578 DV 579
+V
Sbjct: 236 NV 237
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 227/381 (59%), Gaps = 21/381 (5%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLR-VSTYNGILKMYSEC-DSMDDAFSVFS 469
T ++ C D LE +++ + + + R V + ++ M ++C S+D+ +F+
Sbjct: 538 TLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFA 597
Query: 470 NMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ-AGLKPDDQIFIGVFSACSALGD 526
M + +DL +W+TMI +A++G G A+ +F +Q + ++PD F+ V S CS G
Sbjct: 598 RMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGL 657
Query: 527 VVEGMLHFESMSKDYGIVP-SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V +G+ F + GI ++HY +VD+LG GYL EA +FI KMP+ D VW L
Sbjct: 658 VEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSL 717
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS------------ELAKEK 633
+ C +G+LE G+R A +L R + L + A+ ++A+ +
Sbjct: 718 LGACSSYGDLEGGERAARAFIEL--YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERR 775
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
K+ ++ + V+++VHE+ A D SHP++D+IYA + L+ ++EAGY+P+TR VLHD+
Sbjct: 776 VKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDV 835
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
++E KE+ L HSE+LA++ GL+S P R IR++KNLRVC DCH+A K I+++ RE+ +
Sbjct: 836 EEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAV 895
Query: 754 RDAKRFHHF-KDGLCSCRDYW 773
RD RFHHF KDG CSC DYW
Sbjct: 896 RDCNRFHHFGKDGECSCGDYW 916
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 398 LGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKM 454
L L+ + + LP +F ++ +CGD +L A+++H VE L V ++ M
Sbjct: 218 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 277
Query: 455 YSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIF 514
Y C S+D++ +VF M R+ SW+ MI FA+ G A I+ + +Q G +P+ F
Sbjct: 278 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 337
Query: 515 IGVF-SACSA----LGD--VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+ +ACS+ LG+ + G + + D + ++V M GSTG +D A
Sbjct: 338 VTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV------GTALVTMYGSTGAIDRAR 391
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+ +P + V W ++
Sbjct: 392 AAFDAIPAKNIVS-WNAMLT 410
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 15/246 (6%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLRVST 447
G+ +EA+E+ +++Q ++ + ++ ++ C D + EA+++H E V L S
Sbjct: 416 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSI 472
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGL 507
NG+++M++ S+++A + F +D SW+T + + A+ F + G
Sbjct: 473 ANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGF 532
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG-YLDEA 566
+PD + V C+ LG + G + +S + + ++++M+ G +DE
Sbjct: 533 RPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDEC 592
Query: 567 LEFIEKMPME-PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR---------LNEK 616
+MP + D+ W ++ HG+ + I++Q R L+
Sbjct: 593 ERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGC 652
Query: 617 SKAGLV 622
S AGLV
Sbjct: 653 SHAGLV 658
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 408 VDLPTFSQLMQAC-GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFS 466
+ + T + L++ C GDA L + + +H + + N +++MYS+C S+DDA +
Sbjct: 22 IPIETLAGLLRRCIGDAD-LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANA 80
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK---QAGLKPDDQIFIGVFSACS- 522
FS + R + +W+T+I A D++++ K +A +P+ I V A +
Sbjct: 81 AFSALRSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIAS 137
Query: 523 ----------ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
A +V + + +D + ++ +D G G ++ ALE +
Sbjct: 138 GDPSSSSSSRAQARIVHDDIRGSDLERDLFVATAL------LDAYGKCGCVESALEVFSR 191
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ + PD+ W + C GN E DR +V ++
Sbjct: 192 IQV-PDLICWNAAIMAC--AGNDERPDRALLLVRRM 224
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V ++ MY ++D A + F + +++ SW+ M+T + NG +A+++F+ K+
Sbjct: 371 VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR 430
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVS-IVDMLGSTGY 562
L P+ ++ V C DV E +H E + G+ + +V M +G
Sbjct: 431 QSLAPNKVSYLAVLGCCE---DVSEARSIHAEVVGN--GLFAQESSIANGVVRMFARSGS 485
Query: 563 LDEALEFIEKMPMEPDV 579
L+EA+ + ++ V
Sbjct: 486 LEEAMAAFDATVVKDSV 502
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 240/453 (52%), Gaps = 14/453 (3%)
Query: 331 YQQNPNEGQYQSYSGNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGK 390
++ P +G ++ + M V+ ++ + + S N + G VK
Sbjct: 214 FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWN----AVVAGYVKNSH 269
Query: 391 VKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYN 449
+A+ + + ++ + + T S ++ C + AL K +H+ +L ++
Sbjct: 270 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGT 329
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ MY +C + A +F M RD+ +W+ MI+G+A++G G++A+++F + K G++P
Sbjct: 330 SLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP 389
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
+ F+ V +AC G G+ FE M + YGI P + HY +VD+L G L+ A++
Sbjct: 390 NWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDL 449
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASEL 629
I MP EP + L+ CR++ NLE + A + + DP + + A++
Sbjct: 450 IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQW 509
Query: 630 ---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEA 680
K+ K + +E++ +HE+R+ D HP+ I+ + L +MK
Sbjct: 510 DDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAM 569
Query: 681 GYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSAL 740
GY+P+ FVLHD+D+ K + L+ HSE+LA+S GL+S+ +RI KNLRVCGDCH+A
Sbjct: 570 GYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAA 629
Query: 741 KIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
K+ISKI RE+I+RD RFHHF+ G CSC DYW
Sbjct: 630 KVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 34/187 (18%)
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWD 480
G A+AL +R+ +P VS YN +L + D A +F++M RD+ SW+
Sbjct: 106 GYARALGRLADARHLFDRIPTPDAVS-YNTLLSCHFASGDADGARRLFASMPVRDVVSWN 164
Query: 481 TMITGFAKNGLGEDAVDIF----------------------------SQFKQAGLKPDDQ 512
TM++G +K+G E+A +F F+ A K D
Sbjct: 165 TMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAV 224
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
++ + S +G+VV+ + +FE+M V ++ + ++V + D+AL
Sbjct: 225 LWTAMVSGYMDIGNVVKAIEYFEAMP-----VRNLVSWNAVVAGYVKNSHADDALRLFRT 279
Query: 573 MPMEPDV 579
M E +V
Sbjct: 280 MVREANV 286
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 217/384 (56%), Gaps = 20/384 (5%)
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
+L ++ ++ D T+ L + C D A + + H + L VS N + MYS+C
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ +A +F + +D+ SW+ MITG++++G+G+ A F G KPD ++ V
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
S CS G V EG L+F+ M++ +GI P ++H+ +VD+LG G+L EA + I+KMPM+P
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASEL 629
+VW L++ C++HGN EL + A+ V +LD +++ + +L
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
++K KK + +EV +KVH ++A D SHP+ I + L ++ GY+
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRT---- 788
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
+ + E + HSE+LAV+ G++S PA PI IMKNLR+CGDCH+ +K+IS + R
Sbjct: 789 -----ESPRSE--IHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDR 841
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E +IRD RFHHFK G CSC DYW
Sbjct: 842 EFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
+D AE S N + L + G+V+EA+ ++ + ++ + +D T++ + AC
Sbjct: 228 EDMAERDVVSWN----MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 283
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+L K +H V R L + + ++++Y++C S +A VF+++ +R+ SW +I
Sbjct: 284 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 343
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G + +V++F+Q + + D + S C D+ G S+ G
Sbjct: 344 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR-QLHSLCLKSGH 402
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
++ S++ + G L A EF+ E D+ W ++ GN+
Sbjct: 403 NRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI 453
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 434 EHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+ RL S + T N +L Y++ +D A F +M ERD+ SW+ MI +++G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
+A+ + + + G++ D + +AC+ L + G LH + + +P +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS----LPQIDP 305
Query: 550 YV--SIVDMLGSTGYLDEA 566
YV +++++ G EA
Sbjct: 306 YVASALIELYAKCGSFKEA 324
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+++E+ + + +++D + L+ C + L + +H + + N ++
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 413
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTS-------------------------------WDT 481
+Y++C + +A VFS+M+ERD+ S W+
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNA 473
Query: 482 MITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACSALG 525
M+ + ++G ED + ++S Q + PD ++ +F C+ +G
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF-SNMTERD 475
+++CG AL A+A+H + + V N +L Y C ++ DA + +++ E +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ + + M+ G+AK G DA ++F + + + + + G F A L +G+ F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL----DGLETFV 126
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA---LEFIEKMPMEPDVDVWEKLMNLCRMH 592
SM + +P+ + ++ G+ G + A L K D DV L+++
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 593 GNLELGDRCAEIVEQ 607
G ++ R +E+
Sbjct: 187 GYVDFASRLFSQIER 201
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 206/334 (61%), Gaps = 10/334 (2%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C S+ A ++F + E+ + SW+ +ITG+A +GL A+D+F + ++ +
Sbjct: 288 TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-R 346
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PD F+GV +ACS + EG + M +DYGI P+++HY ++D+LG G LDEA +
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKA 619
I M ++PD VW L+N C++HGN+EL + E + +L+P + + +S
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGK 466
Query: 620 GLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKE 679
++ +K KK + + +EV++KV+ + AGD SH +D IYA ++ L M E
Sbjct: 467 WEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHE 526
Query: 680 AGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSA 739
AGY P+T V HD++++ K + +HSERLA++ GL+S+ + I KNLR+C DCH A
Sbjct: 527 AGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVA 586
Query: 740 LKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+K ISKI+ RE+ +RD R+H FK G+CSC D+W
Sbjct: 587 IKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T +++AC A+ E +++HE+V + + ++ MY++C + DA VF +
Sbjct: 150 TLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI 209
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS-----ACSALGD 526
RD W++M+ +A+NG ++++ + + G++P + + V S AC G
Sbjct: 210 VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGR 269
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ G +G + K +++DM G + AL E++ E V W ++
Sbjct: 270 EIHG------FGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERL-REKRVVSWNAII 322
Query: 587 NLCRMHG 593
MHG
Sbjct: 323 TGYAMHG 329
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
++ L+Q+C D+KAL K +H L ++ +Y+ +S+ +A ++F +
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+++L W+ +I G+A NG ++A+ ++ + GL+PD+ V ACSAL + EG
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
E + K G + +++DM G + +A +K+ + D +W ++
Sbjct: 170 IHEYVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSML 221
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 218/392 (55%), Gaps = 13/392 (3%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+ L++++ + +D T+ ++ A ALE KA+H + + N ++
Sbjct: 226 EALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLV 285
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY +C S DDA VF +M E+++ SW+ M+ + +NG +A+ +F G++P+D
Sbjct: 286 NMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDI 345
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + CS G + + HF M +D+GI P H+ ++DMLG +G L+EA E I+
Sbjct: 346 TFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQA 405
Query: 573 MPMEPDVDVWEKLMNLCRMH-----------GNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
MP+ D +W L+ C H + RCA L S L K
Sbjct: 406 MPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIML--SNLYAALKKWD 463
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
+ ++ +K A ++ +E+ +VHE+ AGD+ HP+ +I+ ++ L ++M+ G
Sbjct: 464 EAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKG 523
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y P+ + V+H +++E K+E L HSE+LAV+ G+ S+P R P+ I+KNLRVC DCHSA+K
Sbjct: 524 YEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIK 583
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IS + GR + +RD+ RFHHF G CSC DYW
Sbjct: 584 FISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 10/209 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQ---ACGDAKALEEAKAVHEHVER 438
+ G V+ G+ EAI+ L + C +LP L++ +CG AKAL + + +H
Sbjct: 114 MAGFVQSGRGVEAIQ---LFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAAS 170
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
+ T N I+ MY +C S+ +AF+VF+ M E+++ SW TMI F +N L ++A+
Sbjct: 171 CGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLF 230
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDML 557
F +Q G++ D ++ V A +++G + G LH + G+ S+ ++V+M
Sbjct: 231 FKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYA--GLDTSIVVGNTLVNMY 288
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G G D+A + + M +E +V W ++
Sbjct: 289 GKCGSPDDARDVFDSM-VEKNVVSWNAML 316
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 372 SSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKA 431
SS + L +++ G V E + LLE+ + QL++ C AKALEE +
Sbjct: 3 SSVRRAITKWLSPVLECGGVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRR 62
Query: 432 VHEHVE--RLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKN 489
+H ++ L P +S N ++ MY +C S+ +A VF M +++ SW ++ GF ++
Sbjct: 63 IHRWMDSGTLDRPRFLS--NLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQS 120
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G G +A+ +F + Q G PD + +C A + +G S + G+ +
Sbjct: 121 GRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGR-EIHSAAASCGMDSDLVT 179
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+I++M G G + EA +MP E +V W ++
Sbjct: 180 ANAIINMYGKCGSIGEAFAVFTRMP-EKNVISWSTMI 215
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 233/418 (55%), Gaps = 39/418 (9%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAK 424
FAE+ + + G V+ G ++A+ + L +LE + + ++ T+S ++AC
Sbjct: 399 FAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV-TYSSALRACASLA 457
Query: 425 ALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
ALE +H + + N ++ MY++C S+ DA VF M ++D SW+ MI+
Sbjct: 458 ALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMIS 517
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIV 544
G++ +GL AC+ G + +G +F SM +D+GI
Sbjct: 518 GYSMHGL----------------------------ACANAGLLDQGQAYFTSMIQDHGIE 549
Query: 545 PSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEI 604
P ++HY +V +LG G+LD+A++ I+++P +P V VW L+ C +H ++ELG A+
Sbjct: 550 PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQH 609
Query: 605 VEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRA 655
V +++P S + +K + + K K KK + +E + VH +
Sbjct: 610 VLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTV 669
Query: 656 GDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGL 715
GDTSHPE I ++ L + K+AGYIP VL D++ E KE L HSERLA+S G+
Sbjct: 670 GDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGI 729
Query: 716 LSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+ +P+ +PIRIMKNLR+C DCH+A+K ISK+V RE+++RD RFHHF++GLCSC DYW
Sbjct: 730 IRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + EAIE+ L ++ ++ F+ +++ E +H + +L
Sbjct: 111 IQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGH 170
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
++ YS C +D A VF + +D+ SW M+T FA+N ++A+ +FSQ
Sbjct: 171 ESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQ 230
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ G KP++ F VF AC L V +H ++ Y + + V+++D+ +
Sbjct: 231 MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL--DLYVGVALLDLYTKS 288
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLM 586
G +D+A E++P + DV W ++
Sbjct: 289 GDIDDARXAFEEIP-KKDVIPWSFMI 313
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 21/280 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF+ + +AC +A + K+VH + L + +L +Y++ +DDA F +
Sbjct: 242 TFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEI 301
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG- 530
++D+ W MI +A++ ++AV++F Q +QA + P+ F V AC+ + + G
Sbjct: 302 PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGN 361
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H + G+ + +++D+ G ++ ++ + P DV W ++
Sbjct: 362 QIHCHVIK--IGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV--- 416
Query: 591 MHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKV 650
G+++LGD E +L + L + V A+E+ + AS LE ++
Sbjct: 417 --GHVQLGD--GEKALRLFLNMLEYR-------VQATEVTYSSALRACASLAALEPGLQI 465
Query: 651 HEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
H T DK + L + G I + R V
Sbjct: 466 HSLTVKTT----FDKDIVVTNALIDMYAKCGSIKDARLVF 501
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
++ +Q C K +H + + L + +N +L MY + D + DA +F M
Sbjct: 40 AYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEM 99
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
ER+ S+ T+I G+A++ +A+++F + + G + + +F +
Sbjct: 100 PERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTIL 146
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 230/402 (57%), Gaps = 13/402 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G +EG EA+ + L++ +D S ++ D L++ K + V +L S L
Sbjct: 650 GYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGL 709
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
S N ++ MY +C +D+A F+ M +D+ SW MITG+ K+GLG+ AV IF++
Sbjct: 710 ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKML 769
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ ++PD+ ++ V SACS G + EG F + + GI P ++HY +VD+LG G L
Sbjct: 770 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRL 829
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLD---PSRL----NEK 616
EA ++ MP++P+V +W+ L++LCR+HG++ELG +I+ ++D P+ N
Sbjct: 830 KEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLY 889
Query: 617 SKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+AG NA EL K +K A + +E+ +VH +R+G+ SHP T I ++ +
Sbjct: 890 GQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVE 949
Query: 675 AQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR---APIRIMKNL 730
+++ E GY+ + LHDID E KEE L AHSE+LA+ L + IR+ KNL
Sbjct: 950 RRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNL 1009
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
RVC DCH +K +SKI ++RDA RFH F+DG CSC DY
Sbjct: 1010 RVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V G + ++ + + +Q I + TFS ++ACG ALE+ +H ++
Sbjct: 442 MSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF 501
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ V N ++ MYS+C +++A VF M R L SW+ MI G+ G G A+ F
Sbjct: 502 EMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGM 561
Query: 502 FKQAGLK--PDDQIFIGVFSACSALGDVVEG 530
++A +K PD+ + ACS+ G + G
Sbjct: 562 MQEAKIKERPDEFTLTSLLKACSSTGMIYAG 592
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 24/286 (8%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCIS--VDLPTFSQLMQACGDAKALEEAKAVHEHVER 438
+ G V G A+ G++++ I D T + L++AC + K +H + R
Sbjct: 542 MIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 601
Query: 439 --LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV 496
P + ++ +Y +C ++ A F + E+ + SW ++I G+A+ G +A+
Sbjct: 602 SGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAM 661
Query: 497 DIFSQFKQAGLKPDDQIF---IGVFSACSAL--GDVVEGMLHFESMSKDYGIVPSMKHYV 551
+F + ++ + D + IGVF+ + L G ++ ++ + G+ S+ +
Sbjct: 662 GLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALV----VKLPSGLETSVSN-- 715
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS 611
S+VDM G +DEA + +M ++ DV W ++ HG LG + I ++
Sbjct: 716 SLVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVMITGYGKHG---LGKKAVSIFNKMLRH 771
Query: 612 RLNEKSKAGLVPVNA-SELAKEKENKKLASQNLLE---VRSKVHEY 653
+ L ++A S KE ++L S+ LLE ++ +V Y
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSK-LLETQGIKPRVEHY 816
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S L + T N ++ MY +C A+ VF +M ER++ SW +++G NG ++ +F+
Sbjct: 400 SGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFT 459
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + G+ P++ F AC L + +G+ +H + + ++ + + S+VDM
Sbjct: 460 EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN--SLVDMYSK 517
Query: 560 TGYLDEA 566
G ++EA
Sbjct: 518 CGRINEA 524
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 233/406 (57%), Gaps = 16/406 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLE--KQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G + G+ KEA+ + L+ K D T + AC A++ + +H ++++
Sbjct: 447 ISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE 506
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + ++ MYS+ ++ A VF ++ +D+ W MI G A +G GE A+++F
Sbjct: 507 RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
++ +KP+ F + ACS G V EG F+ M + YG+VP KHY +VD+LG
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR 626
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G+L+EAL+FIE MP+ P VW L+ C +HGNLEL ++ + +++P N +
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPG--NHGAYV 684
Query: 620 GLVPVNA--------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + A SEL ++ + KK + +E+ VHE+ GD +HP + IYA
Sbjct: 685 LLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYA 744
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDI-DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + A+++ GY+ T +L + ++E KE+AL HSE++A++ GL+ + ++ IRI+
Sbjct: 745 KLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIV 804
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCH+ K++SK+ GR++++RD RFHHF G CSC+DYW
Sbjct: 805 KNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 45/251 (17%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G +A+++ + + + + T +M AC L + V ++++R
Sbjct: 314 MVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNE 373
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK---NGLGEDAVD 497
+ ++ N + M+ +C ++ A +F NM +RD+ SW T+I G+AK +G+ D D
Sbjct: 374 MMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFD 433
Query: 498 ----------------------------IFS--QFKQAGLKPDDQIFIGVFSACSALGDV 527
IF Q ++G +PD + SAC+ LG +
Sbjct: 434 SMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAM 493
Query: 528 -----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ G + E + + + S++DM +G +++A+E + DV VW
Sbjct: 494 DIGEWIHGYIKKERIQLNRNLA------TSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVW 546
Query: 583 EKLMNLCRMHG 593
++ MHG
Sbjct: 547 SAMIAGLAMHG 557
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF L++A + + KAVH + V N ++ Y+ C +D A+ VF M
Sbjct: 242 TFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-EM 300
Query: 472 TE---RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
E +D+ SW++M+TGF + G + A+D+F + + G+ P+ + V SAC+ ++
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360
Query: 529 EG 530
G
Sbjct: 361 LG 362
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 226/393 (57%), Gaps = 17/393 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G V+ G E ++ + I + +FS +M AC L K +H ++ R
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 328
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V + ++ MY++C ++ A +F M D+ SW MI G+A +G DA+ +F +
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
+ G+KP+ F+ V +ACS G V E +F SM++DY I+P ++HY ++ D+LG G
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 448
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------N 614
L+EA EFI M +EP VW L+ CR+H N+EL ++ ++ + +DP + N
Sbjct: 449 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 508
Query: 615 EKSKAGLVPVNASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
S AG +A +L ++K KK + + +E+++KVH + AGD SHP D+I ++
Sbjct: 509 IYSAAGRWK-DARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALK 567
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L QM+ GY+ +T VLHD+++E K L +HSERLA++ G++S+PA IR+ KNLR
Sbjct: 568 VLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 627
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
VC DCH+A K ISKIVGRE++ F+ F D
Sbjct: 628 VCVDCHTATKFISKIVGREIV------FYFFLD 654
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 22/225 (9%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ + L + K +H + R V + ++ MY++C +DD+ VF +
Sbjct: 198 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 257
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ D SW+++I G +NG+ ++ + F Q A +KP+ F + AC+ L
Sbjct: 258 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT----- 312
Query: 532 LHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
LH Y I V ++VDM G + A +KM + D+ W ++
Sbjct: 313 LHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-DMVSWTAMIM 371
Query: 588 LCRMHGN----LELGDRCAEIVEQLDP------SRLNEKSKAGLV 622
+HG+ + L R VE + P + L S AGLV
Sbjct: 372 GYALHGHAYDAISLFKRME--VEGVKPNYVAFMAVLTACSHAGLV 414
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M +RD+ SW+T+I+G A+NG+ EDA+ + + A L+PD V + +
Sbjct: 152 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 211
Query: 527 VVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+++G +H ++ Y + S++DM +D++ +P + W +
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGS--SLIDMYAKCTRVDDSCRVFYMLPQHDGIS-WNSI 268
Query: 586 MNLCRMHGNLELGDRCAE--IVEQLDPSRLNEKSKAGLVPVNA 626
+ C +G + G + + ++ ++ P N S + ++P A
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKP---NHVSFSSIMPACA 308
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 230/399 (57%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPL 443
V G ++ I ++ + I+ D T L+ AC + + A+AVH ++ L L
Sbjct: 217 VHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNL 276
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
++T +L +Y++ ++ D+ VF M D +W M++ +A +G G +A++ F
Sbjct: 277 AIAT--ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMV 334
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+ G+ PD F + SACS G V EG +F+ M + YG+ ++HY +VD+LG +G+L
Sbjct: 335 REGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHL 394
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPS-------RLNEK 616
++A + I+ MPMEP+ VW L+ CR+ GN+ELG AE + LDPS N
Sbjct: 395 NDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMY 454
Query: 617 SKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
S AG L KE+ + + +E +K+H + GD SHP+T++IY + L
Sbjct: 455 SAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELV 514
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+ +E G+ +T +VLHD+D+E KE+ + HSE+LA++ GLL + A P+ I KN+R+CG
Sbjct: 515 RKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICG 574
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH K+IS I R +IIRD KRFHHF +GLCSC DYW
Sbjct: 575 DCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 398 LGLLEKQCISVDLP----TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILK 453
LGLL + + L T ++ AC L+ K +H + L V N ++
Sbjct: 124 LGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLIN 183
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQI 513
+Y +C ++ A +F M+ + L SW++M+ GL E + F ++AG+ D
Sbjct: 184 LYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQAT 243
Query: 514 FIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
+ + AC LG + V G + + + I ++ +D+ G L ++ +
Sbjct: 244 VVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATAL------LDLYAKLGTLSDSCK 297
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHG 593
M + PD W +++ MHG
Sbjct: 298 VFGGM-INPDAVAWTAMLSSYAMHG 321
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 414 SQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE 473
S L+ A ++ +A+H V + ++ + ++ Y E DA +F + +
Sbjct: 42 SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPD 101
Query: 474 RDLTSWDTMITGFAKNG-LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
+DL SW+++I+GF++ LG +F + GLKP++ I V SAC+ +G++ G
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ G++ +K S++++ G G L+ A E M ++ V W ++
Sbjct: 162 -IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVS-WNSMV 213
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 229/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G KEAI + +++ + + TF ++ AC A VHE+
Sbjct: 183 MISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNG 242
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ MY+ C ++ A VF +M ER++ +W MI+G+ NG G AV++F
Sbjct: 243 LDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFH 302
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ ++ GL P+ F+ V SAC+ G V EG FESM ++Y +VP ++H+V +VDMLG
Sbjct: 303 EMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRA 362
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAE---IVEQLDPSRLNEKS 617
G LDEA FI+++ EP +W ++ C+MH N LG + AE E +P+ S
Sbjct: 363 GLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILS 422
Query: 618 KAGLVPVNASELAKEKEN------KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ ++ ++N KK + +++ K + + GD SH ET++IY +
Sbjct: 423 NIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLD 482
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L + +EAGY+ + V+H++++E +E AL HSE+LA++ GLL + IRI+KNLR
Sbjct: 483 QLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLR 542
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+C DCHSA+K IS I RE+I+RD RFHHFK+G CSC DYW
Sbjct: 543 MCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSMDDAFSVFS 469
TF+ ++++C D AL + +H HV L++ Y ++ Y +C + +A VF
Sbjct: 113 TFTSVIKSCADLVALRHGRIIHGHV--LVNGFGSDVYVQTALMSFYGKCGVLCNARKVFD 170
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M +R + +W++MI+G+ +NG ++A+ +F + K+ G++P+ F+ V SAC+ LG +
Sbjct: 171 KMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFIL 230
Query: 530 GMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G E + G+ ++ S+++M G + +A E + M E +V W +++
Sbjct: 231 GCWVHEYAVGN-GLDLNVVLGTSLINMYTRCGNVSKAREVFDSMK-ERNVVAWTAMIS 286
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 217/384 (56%), Gaps = 20/384 (5%)
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
+L ++ ++ D T+ L + C D A + + H + L VS N + MYS+C
Sbjct: 493 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 552
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ +A +F + +D+ SW+ MITG++++G+G+ A F G KPD ++ V
Sbjct: 553 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 612
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
S CS G V EG L+F+ M++ +GI P ++H+ +VD+LG G+L EA + I+KMPM+P
Sbjct: 613 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 672
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASEL 629
+VW L++ C++HGN EL + A+ V +LD +++ + +L
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 732
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
++K KK + +EV +KVH ++A D SHP+ I + L ++ GY+
Sbjct: 733 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRT---- 788
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
+ + E + HSE+LAV+ G++S PA PI IMKNLR+CGDCH+ +K+IS + R
Sbjct: 789 -----ESPRSE--IHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDR 841
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E +IRD RFHHFK G CSC DYW
Sbjct: 842 EFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
+D AE S N + L + G+V+EA+ ++ + ++ + +D T++ + AC
Sbjct: 228 EDMAERDVVSWN----MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 283
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+L K +H V R L + + ++++Y++C S +A VF+++ +R+ SW +I
Sbjct: 284 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 343
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDY- 541
G + +V++F+Q + + D + S C D+ G LH + +
Sbjct: 344 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 403
Query: 542 -GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
IV S S++ + G L A EF+ E D+ W ++ GN+
Sbjct: 404 RAIVVSN----SLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI 453
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 434 EHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+ RL S + T N +L Y++ +D A F +M ERD+ SW+ MI +++G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
+A+ + + + G++ D + +AC+ L + G LH +K +P +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH----AKVIRSLPQIDP 305
Query: 550 YV--SIVDMLGSTGYLDEA 566
YV +++++ G EA
Sbjct: 306 YVASALIELYAKCGSFKEA 324
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF-SNMTERD 475
+++CG AL A+A+H + + V N +L Y C ++ DA + +++ E +
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ + + M+ G+AK G DA ++F + + + + + G F A L +G+ F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFL----DGLETFV 126
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA---LEFIEKMPMEPDVDVWEKLMNLCRMH 592
SM + +P+ + ++ G+ G + A L K D DV L+++
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 593 GNLELGDRCAEIVEQ 607
G ++ R +E+
Sbjct: 187 GYVDFASRLFSQIER 201
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+++E+ + + +++D + L+ C + L + +H + + N ++
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 413
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTS-------------------------------WDT 481
+Y++C + +A VFS+M+ERD+ S W+
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 473
Query: 482 MITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACSALG 525
M+ + ++G ED + ++S Q + PD ++ +F C+ +G
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 518
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 218/375 (58%), Gaps = 15/375 (4%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDAFSVFS 469
T L+ AC + A+ + VH V R + ++++ + G + MYS+C ++ A VF
Sbjct: 368 TIVALISACSNLGAVSQGFWVHCFVLR--NKIKMNRFVGTAFVDMYSKCGCLNLACQVFD 425
Query: 470 NMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV 527
M E RD + MI GFA +G G A++++ + K GL PD F+ ACS +G V
Sbjct: 426 KMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLV 485
Query: 528 VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
EG+ F+SM + +G+ P ++HY ++D+LG G L EA E++ MPM+P+ +W L+
Sbjct: 486 EEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLG 545
Query: 588 LCRMHGNLELGDRCAEIVEQLDPSR-----LNEKSKAGLVPVN----ASELAKEKENKKL 638
R+HGNL +G+ + +L+P L A + VN +L K KL
Sbjct: 546 AARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKL 605
Query: 639 ASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGK 698
+L+E++ +HE+ GD SHP + +IY I + ++++E G+ T L D+++E K
Sbjct: 606 PGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEEEDK 665
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E L HSERLA++ L++SP+ IRI+KNLRVCGDCH+ K+IS RE+I+RD R
Sbjct: 666 EGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNR 725
Query: 759 FHHFKDGLCSCRDYW 773
FHHFKDG CSC DYW
Sbjct: 726 FHHFKDGSCSCLDYW 740
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 412 TFSQLMQACGDAKA-LEEAKAVHEHVERLL-SPLRVSTYNGILKMYSECDSMDDAFSVFS 469
TF L +AC ++ +H HV + L P +L Y++ M + +F
Sbjct: 252 TFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFD 311
Query: 470 NMTERDLTSWDTMITGFAKNG-------------LGEDAVDIFSQFKQAGLKPDDQIFIG 516
+ E DL +W+ ++ +A++ +++ +F + G++P++ +
Sbjct: 312 RINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVA 371
Query: 517 VFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKM 573
+ SACS LG V +G +H + M +V + VDM G L+ A + +KM
Sbjct: 372 LISACSNLGAVSQGFWVHCFVLRNKI----KMNRFVGTAFVDMYSKCGCLNLACQVFDKM 427
Query: 574 P 574
P
Sbjct: 428 P 428
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 217/384 (56%), Gaps = 20/384 (5%)
Query: 399 GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
+L ++ ++ D T+ L + C D A + + H + L VS N + MYS+C
Sbjct: 483 AMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKC 542
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+ +A +F + +D+ SW+ MITG++++G+G+ A F G KPD ++ V
Sbjct: 543 GRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVL 602
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
S CS G V EG L+F+ M++ +GI P ++H+ +VD+LG G+L EA + I+KMPM+P
Sbjct: 603 SGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPT 662
Query: 579 VDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASEL 629
+VW L++ C++HGN EL + A+ V +LD +++ + +L
Sbjct: 663 AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKL 722
Query: 630 AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFV 689
++K KK + +EV +KVH ++A D SHP+ I + L ++ GY+
Sbjct: 723 MRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRT---- 778
Query: 690 LHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGR 749
+ + E + HSE+LAV+ G++S PA PI IMKNLR+CGDCH+ +K+IS + R
Sbjct: 779 -----ESPRSE--IHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDR 831
Query: 750 ELIIRDAKRFHHFKDGLCSCRDYW 773
E +IRD RFHHFK G CSC DYW
Sbjct: 832 EFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 6/232 (2%)
Query: 364 DDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
+D AE S N + L + G+V+EA+ ++ + ++ + +D T++ + AC
Sbjct: 218 EDMAERDVVSWN----MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 273
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+L K +H V R L + + ++++Y++C S +A VF+++ +R+ SW +I
Sbjct: 274 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 333
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGI 543
G + +V++F+Q + + D + S C D+ G S+ G
Sbjct: 334 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR-QLHSLCLKSGH 392
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
++ S++ + G L A EF+ E D+ W ++ GN+
Sbjct: 393 NRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI 443
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 434 EHVERLLSPLRVSTY---NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG 490
+ RL S + T N +L Y++ +D A F +M ERD+ SW+ MI +++G
Sbjct: 180 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 239
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKH 549
+A+ + + + G++ D + +AC+ L + G LH + + +P +
Sbjct: 240 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS----LPQIDP 295
Query: 550 YV--SIVDMLGSTGYLDEA 566
YV +++++ G EA
Sbjct: 296 YVASALIELYAKCGSFKEA 314
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
+++E+ + + +++D + L+ C + L + +H + + N ++
Sbjct: 344 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 403
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTS-------------------------------WDT 481
+Y++C + +A VFS+M+ERD+ S W+
Sbjct: 404 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNA 463
Query: 482 MITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACSALG 525
M+ + ++G ED + ++S Q + PD ++ +F C+ +G
Sbjct: 464 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIG 508
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF-SN 470
+ +++CG AL A+A+H + + V N +L Y C ++ DA + ++
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA------GLKPDDQIFIGVFSACSAL 524
+ E ++ + + M+ G+AK G DA ++F + + L D G + +C AL
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 525 G--DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
G ++ +L D+ P ++ ++VDM GY+D A
Sbjct: 142 GCRELAPQLLGL-FWKFDFWGDPDVE--TALVDMFVRCGYVDFA 182
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 218/400 (54%), Gaps = 10/400 (2%)
Query: 384 GLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G VK + +A+ V ++E + + T S ++ C + AL + VH+ +L
Sbjct: 211 GYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLS 270
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
V+ +L MY +C ++DA VF M+ +D+ +W+ MI+G+A++G G A+ +F +
Sbjct: 271 RNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKM 330
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
K G+ PD + V +AC G G+ FE+M + Y I P + HY +VD+L G
Sbjct: 331 KDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGL 390
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
L+ A+ I MP EP + L+ CR++ NLE + A + + DP + +
Sbjct: 391 LERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANI 450
Query: 623 PVNASELA---------KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A++ A K+ K + +E++ HE+R+ D HP+ I+ + L
Sbjct: 451 YAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLDRL 510
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+ MK GY+P+ F LHD++ K + L+ HSE+LA++ GL+S+ +RI KNLR+C
Sbjct: 511 QMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRIC 570
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+A K+ISKI RE+I+RD RFHHF+ G CSC DYW
Sbjct: 571 GDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
+YN +L + C +D A VFS M +D+TSW+TM++G +KNG E+A +F
Sbjct: 79 SYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRN 138
Query: 507 LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEA 566
+ + + ACS E + D + + ++V TG + +A
Sbjct: 139 AVSWNAMVAAL--ACSGDMGAAEDLFRNAPEKTDAIL------WTAMVSGYMDTGNVQKA 190
Query: 567 LEFIEKMPME 576
+EF MP+
Sbjct: 191 MEFFGAMPVR 200
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA-KAVHEHVERL 439
+ GL K G +EA + ++ + +V + GD A E+ + E + +
Sbjct: 114 MVSGLSKNGASEEAAAMFRIMPVRN-AVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAI 172
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + ++ Y + ++ A F M R+L SW+ ++ G+ KN +DA+ +F
Sbjct: 173 L-------WTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVF 225
Query: 500 -SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHY---VSIV 554
+ + + ++P+ V CS L + G +H M +P ++ S++
Sbjct: 226 KTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMK-----LPLSRNVTVGTSLL 280
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
M G L++A + ++M + D+ W +++ HG
Sbjct: 281 SMYCKCGDLNDACKVFDEMSTK-DIVAWNAMISGYAQHG 318
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 223/399 (55%), Gaps = 10/399 (2%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K+ +V E + ++++ I T + ++ AC AL K +H + +
Sbjct: 312 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ MY +C ++ + VF M +DL SW+ M+ +A NG E+ +++F +
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+G+ PD F+ + S CS G G+ FE M ++ + P+++HY +VD+LG G +
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNE 615
EA++ IE MP +P +W L+N CR+HGN+ +G+ A+ + L+P S +
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYA 551
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRA-GDTSHPETDKIYALIRGLR 674
+K E+ K++ KK A + ++V+ K+ + A G +D+ + L+
Sbjct: 552 DAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQ 611
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++++GY P T VLHD+D+E K + HSERLA ++ L+ + PIRI KNLRVC
Sbjct: 612 EAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCA 671
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS +KI+S++ R +++RD KRFHHF DG+CSC+DYW
Sbjct: 672 DCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++AC D K L + +H + + + YN +LK+Y E DDA VF M
Sbjct: 238 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM 297
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ER++ +W+++I+ +K + ++F + ++ + + ACS + ++ G
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357
Query: 532 -LHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + + SK+ VP + S++DM G G ++ + + M + D+ W ++N
Sbjct: 358 EIHAQILKSKEKPDVPLLN---SLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCY 413
Query: 590 RMHGNLE 596
++GN+E
Sbjct: 414 AINGNIE 420
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAV---------H 433
GL K K+ EA+ ++ ++ P ++ L+ AC AK+L +
Sbjct: 104 GLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSL 163
Query: 434 EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS---WDTMITGFAKNG 490
H +LLS L + ++S C +D A +F ++T+ L + W M G+++NG
Sbjct: 164 RHNPKLLSKL--------ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNG 215
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKH 549
DA+ ++ + ++P + AC L D+ G +H + + + +
Sbjct: 216 SPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV--DQVV 273
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
Y ++ + +G D+A + + M E +V W L+++
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLISV 311
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 224/406 (55%), Gaps = 38/406 (9%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + + +A++++ + + +D ++ ++ A LE VH R
Sbjct: 590 MISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + ++ MYS+C +D A F+ M +F+
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMP-------------------------LFA 684
Query: 501 QFKQAGLKPDDQI-FIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K G P D + F+GV SACS G + EG HFESMS YG+ P ++H+ + D+LG
Sbjct: 685 NMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGR 744
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMN-LCRMHG-NLELGDRCAEIVEQLDPSRLNEKS 617
G LD+ +FIEKMPM+P+V +W ++ CR +G ELG + AE++ QL+P
Sbjct: 745 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 804
Query: 618 KAGLV---------PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
G + V A + K+ + KK A + + ++ VH + AGD SHP+ D IY
Sbjct: 805 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYK 864
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSS-PARAPIRIM 727
++ L +M++AGY+P+T F L+D++QE KEE L HSE+LAV+ L + + PIRIM
Sbjct: 865 KLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 924
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVCGDCHSA K ISKI GR++I+RD+ RFHHF+DG CSC D+W
Sbjct: 925 KNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 426 LEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
L++ + VH HV L V NG++ MY++C S+ DA VF MTE+D SW++MIT
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMIT 388
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGI 543
G +N +AV+ + ++ + P I S+C++L G +H ES+ GI
Sbjct: 389 GLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLK--LGI 446
Query: 544 VPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++ +++ + TG L+E + MP E D W ++
Sbjct: 447 DLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSII 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+T N ++ Y +C MD +FS M+ER D +W++MI+G+ N L A+D+ Q
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQ 612
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G + D ++ V SA +++ + GM + S + + ++VDM G LD
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGM-EVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 565 EALEFIEKMPM----------EPDVDVWEKLMNLCRMHGNLELG 598
AL F MP+ PD + +++ C G LE G
Sbjct: 672 YALRFFNTMPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 715
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T + +C K + + +H +L L VS N ++ +Y+E +++ +FS+M
Sbjct: 417 TLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSM 476
Query: 472 TERDLTSWDTMITGFAKNGLG-EDAVDIFSQFKQAGLKPDDQIF 514
E D SW+++I A + +AV F +AG K + F
Sbjct: 477 PEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITF 520
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ Y E A VF M R+ SW +++G+++NG ++A+ +
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVK 95
Query: 505 AGLKPDDQIFIGVFSACSALGDV 527
G+ + F+ AC L V
Sbjct: 96 EGVFSNHYAFVSALRACQELDSV 118
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 234/402 (58%), Gaps = 13/402 (3%)
Query: 384 GLVKEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
G V+ G+ E++ + L+E++ V+ T S +++ CG + L+ + +H +
Sbjct: 196 GYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSF 255
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ ++ +YS+C +++A+ VF +T R+L W+ M+ A++ + ++F +
Sbjct: 256 DSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDK 315
Query: 502 FKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K G +K + F+ V ACS G V +G +FE M KDYGI P +HY ++VD+LG
Sbjct: 316 MKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRA 374
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G L++A++ IE+MPMEP VW L+ CR+HGN +L A+ V +L
Sbjct: 375 GKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLS 434
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N + AG A ++ +++ KK + +E +++H + AGD SH ++ +IY +
Sbjct: 435 NAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLD 494
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M +AGY+ +T FVL ++D E K ++ HSERLA++ G ++ P PIR+MKNLR
Sbjct: 495 ELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLR 554
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
VCGDCH+A+K ISK GR +I+RD RFH F+DG C+C DYW
Sbjct: 555 VCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 100/216 (46%), Gaps = 17/216 (7%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
L+ +Q + D F ++CG +L AK +H + L + + ++ MY++C
Sbjct: 111 LMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCG 170
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF--KQAGLKPDDQIFIGV 517
+ A +VF M R++ SW +I G+ + G ++++ +F +F ++ +D V
Sbjct: 171 DICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSV 230
Query: 518 FSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
C +G ++ G L F++ V S S++ + G ++EA + E+
Sbjct: 231 LRVCGGSTLLQMGRLIHG-LSFKTSFDSSCFVAS-----SLISLYSKCGVVEEAYDVFEE 284
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
+ + ++ +W ++ C H + D+ E+ +++
Sbjct: 285 VTVR-NLGMWNAMLIACAQHAH---TDKTFELFDKM 316
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 423 AKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
+++L + +H H+ +L L + + +++ ++ YS+ + +F + + T+W +
Sbjct: 33 SRSLPKGLQLHAHIIKLGLQTIPLLSHH-LINFYSKTHLPYSSLQIFHDSPHKSATTWSS 91
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV-VEGMLHFESMSKD 540
+I+ FA+N L +++ F + G+ PDD IF +C L + V MLH ++
Sbjct: 92 VISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTA 151
Query: 541 YGIVPSMKHYV--SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELG 598
Y + +V S++DM G + A ++MP +V W L ++G ++LG
Sbjct: 152 Y----HLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGL-----IYGYVQLG 201
Query: 599 D 599
+
Sbjct: 202 E 202
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 227/404 (56%), Gaps = 16/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ GK +EA+ + + D TF+ ++ AC AL A+ +H+ + +
Sbjct: 116 MIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKR 175
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+C ++ A VF ++ D++ W+++I G A +GL DA+ +FS
Sbjct: 176 IEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFS 235
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ + + PD F+G+ ACS G V EG +F+ M Y I P ++HY ++VD+LG
Sbjct: 236 KMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRA 295
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G LDEA I MPMEPDV VW L++ CR H N ELG+ V + S
Sbjct: 296 GLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGE-----VAVANISGPKSGDYVL 350
Query: 621 LVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + S E+ KE+ +K ++ E VH +RAGD SHPET+ +Y +
Sbjct: 351 LSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKI 410
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ GL + K G++P T V+ D+ +E KEE L HSE+LA+++G+L + IRI KN
Sbjct: 411 LEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKN 470
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH+ +K++S ++ R +IIRD RFH F+ G CSC DYW
Sbjct: 471 LRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF------- 465
F L++AC ++ + A H + R S ++ Y C+ ++ A+
Sbjct: 14 FCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVF 73
Query: 466 --------------------------SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
VF M +RD+ +W++MI G+ +NG E+A+ F
Sbjct: 74 SWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSF 133
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ ++PD F V +AC+ LG + + M + I + +++DM
Sbjct: 134 QAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQK-RIEVNFILSSALIDMYSK 192
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G ++ A E E + DV VW L+N +HG
Sbjct: 193 CGRIETAKEVFESVE-RNDVSVWNSLINGLAVHG 225
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 224/397 (56%), Gaps = 11/397 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G + + A+E+ +++ + T + +++AC LE H H+ +
Sbjct: 184 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 243
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L ++ N ++ MY +C S++DA VF+ M ERD+ +W TMI+G A+NG ++A+ +F
Sbjct: 244 DLILN--NALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K +G KP+ +GV ACS G + +G +F SM K YGI P +HY ++D+LG G
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAG 361
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
LD+A++ + +M EPD W L+ CR+ N+ L + A+ V LDP +
Sbjct: 362 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSN 421
Query: 622 VPVNA------SELAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
+ N+ E+ K + KK + +EV ++H + GD SHP+ ++ +
Sbjct: 422 IYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQ 481
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRV 732
L ++ GY+PET FVL D++ E E++L HSE+LA++ GL++ P+ IRI KNLR+
Sbjct: 482 LIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLRI 541
Query: 733 CGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
CGDCH K+ SK+ R ++IRD R+HHF+DG CSC
Sbjct: 542 CGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
++A+E+L L+ + + ++ T+S +++AC + + + +H + + V + +
Sbjct: 96 QKALELLVLMLRDGVRPNVYTYSSVLRACN---GMSDVRMLHCGIIKEGLESDVYVRSAL 152
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ ++++ +DA SVF M D W+++I GFA+N + A+++F + K+AG +
Sbjct: 153 IDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 212
Query: 512 QIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
V AC+ L + GM H + D ++ + ++VDM G L++A
Sbjct: 213 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN----ALVDMYCKCGSLEDARRVF 268
Query: 571 EKMPMEPDVDVWEKLMN 587
+M E DV W +++
Sbjct: 269 NQMK-ERDVITWSTMIS 284
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
L+ + D T+S+L++ C +A+ E + H+ + N ++ MY + +
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++DA +F M +R++ SW TMI+ ++K + + A+++ + G++P+ + V A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C+ + DV MLH + + G+ + +++D+ G ++AL ++M + D
Sbjct: 124 CNGMSDV--RMLHCGIIKE--GLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAI 178
Query: 581 VWEKLM 586
VW ++
Sbjct: 179 VWNSII 184
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 233/391 (59%), Gaps = 21/391 (5%)
Query: 396 EVLGLLEKQCISVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV---STYN 449
E L L ++ S + P T ++ AC A++ + +H ++ + L + S
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365
Query: 450 GILKMYSECDSMDDAFSVF-SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
++ MY++C +D A VF S+M+ R L++W+ MI+GFA +G A DIFS+ + G++
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
PDD F+G+ SACS G + G F SM++ Y I P ++HY ++D+LG +G EA E
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485
Query: 569 FIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS- 627
I MPMEPD +W L+ C++HGNLELG+ A+ + +++P N S L + A+
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPG--NSGSYVLLSNIYAAA 543
Query: 628 ----ELAKEKE-------NKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQ 676
E+AK + KK+ + +E+ S VHE+ GD HP+ +IY ++ +
Sbjct: 544 GRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVL 603
Query: 677 MKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDC 736
++EAG++P+T VL ++++E +E AL HSE+LA++ GL+S+ + IMKNLRVC +C
Sbjct: 604 LEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNC 663
Query: 737 HSALKIISKIVGRELIIRDAKRFHHFKDGLC 767
H A K+ISKI RE+I RD RF HF+DG+C
Sbjct: 664 HEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 381 QLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V+ G KEA+E+ ++ + D T ++ AC + ++E + VH +
Sbjct: 192 MISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDH 251
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+ N ++ +YS+ ++ A +F + +D+ SW+T+I G+ L ++A+ +F
Sbjct: 252 GFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLF 311
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHY-VSIVDML 557
+ ++G P+D + + AC+ LG + G +H K G+V ++ S++DM
Sbjct: 312 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMY 371
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G +D A + + + W +++ MHG
Sbjct: 372 AKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG 407
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 398 LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSE 457
LGLL D TF L+++C +K +E + +H HV +L L + + ++ MY++
Sbjct: 83 LGLLP------DSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQ 136
Query: 458 CDSMDDAFSVFSNMTERDLTS-------------------------------WDTMITGF 486
++DA VF + RD+ S W+ MI+G+
Sbjct: 137 NGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGY 196
Query: 487 AKNGLGEDAVDIFSQ-FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
+ G ++A+++F + ++PD+ + V SAC A D +E H S D+G
Sbjct: 197 VETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC-AQSDSIELGRHVHSWINDHGFAS 255
Query: 546 SMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
++K +++D+ G ++ A E + + DV W L+
Sbjct: 256 NLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLI 295
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 223/399 (55%), Gaps = 10/399 (2%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K+ +V E + ++++ I T + ++ AC AL K +H + +
Sbjct: 319 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 378
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ MY +C ++ + VF M +DL SW+ M+ +A NG E+ +++F +
Sbjct: 379 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 438
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+G+ PD F+ + S CS G G+ FE M ++ + P+++HY +VD+LG G +
Sbjct: 439 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 498
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNE 615
EA++ IE MP +P +W L+N CR+HGN+ +G+ A+ + L+P S +
Sbjct: 499 EAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYA 558
Query: 616 KSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRA-GDTSHPETDKIYALIRGLR 674
+K E+ K++ KK A + ++V+ K+ + A G +D+ + L+
Sbjct: 559 DAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQ 618
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
++++GY P T VLHD+D+E K + HSERLA ++ L+ + PIRI KNLRVC
Sbjct: 619 EAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCA 678
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS +KI+S++ R +++RD KRFHHF DG+CSC+DYW
Sbjct: 679 DCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 717
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++AC D K L + +H + + + YN +LK+Y E DDA VF M
Sbjct: 245 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM 304
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ER++ +W+++I+ +K + ++F + ++ + + ACS + ++ G
Sbjct: 305 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 364
Query: 532 -LHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + + SK+ VP + S++DM G G ++ + + M + D+ W ++N
Sbjct: 365 EIHAQILKSKEKPDVPLLN---SLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCY 420
Query: 590 RMHGNLE 596
++GN+E
Sbjct: 421 AINGNIE 427
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLP-TFSQLMQACGDAKALEEAKAV---------H 433
GL K K+ EA+ ++ ++ P ++ L+ AC AK+L +
Sbjct: 111 GLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSL 170
Query: 434 EHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS---WDTMITGFAKNG 490
H +LLS L + ++S C +D A +F ++T+ L + W M G+++NG
Sbjct: 171 RHNPKLLSKL--------ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNG 222
Query: 491 LGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKH 549
DA+ ++ + ++P + AC L D+ G +H + + + +
Sbjct: 223 SPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV--DQVV 280
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
Y ++ + +G D+A + + M E +V W L+++
Sbjct: 281 YNVLLKLYMESGLFDDARKVFDGMS-ERNVVTWNSLISV 318
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 228/390 (58%), Gaps = 9/390 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+EV + + + + +F+ + +C + LE+ + +H ++ V T N ++
Sbjct: 338 EALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLV 397
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS+C + DA VF + E+++ SW+++I G A++G G A+ +F + + G++ D+
Sbjct: 398 VMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEI 457
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
G+ SACS G + + F ++ + +++HY +VD+LG G ++EA
Sbjct: 458 TLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATS 517
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVP 623
MP+E + VW L++ CR+H +L++ +R A+ + +++P S L S+ L
Sbjct: 518 MPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEV 577
Query: 624 VNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
K K + + ++ HE+ + D SHP T++IY + L +++E GYI
Sbjct: 578 ARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYI 637
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+ +F LHD++ E EE L HSERLA++ GLLS+ + I IMKNLRVCGDCH+A+ ++
Sbjct: 638 PDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLM 697
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KIV RE+++RD+ RFHHFK+G+CSC DYW
Sbjct: 698 AKIVNREIVVRDSSRFHHFKNGICSCGDYW 727
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y+ C M DA VF +++ W ++TG N +A+++FS+ + + P+
Sbjct: 295 LVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPN 354
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ F ++C L D+ +G + + G+ ++ S+V M G++ +AL +
Sbjct: 355 ESSFTSALNSCVGLEDLEKGRV-IHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDAL-CV 412
Query: 571 EKMPMEPDVDVWEKLMNLCRMHG 593
K E +V W ++ C HG
Sbjct: 413 FKGICEKNVVSWNSVIVGCAQHG 435
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V+T+N ++ Y ++DA +F M RD+ SW ++I G +NG A+ F
Sbjct: 185 VATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVG 244
Query: 505 -AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV--SIVDMLGSTG 561
+G+ + SA + + D G+ M K +G + +V S+V S
Sbjct: 245 FSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFK-FGFCCGLDEFVSASLVTFYASCK 303
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+ +A + + + +V VW L+ C
Sbjct: 304 RMGDACKVFGETVCK-NVVVWTALLTGC 330
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+D A +VF+ + ++ + ++ +A N +A+++F+Q D + V A
Sbjct: 73 LDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSN--TKDTISWNSVIKA 130
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP-MEPDV 579
D V + F+ M + I + +I+ STG ++EA F MP ++ DV
Sbjct: 131 SIICNDFVTAVKLFDEMPQRNSI-----SWTTIIHGFLSTGRVNEAERFFNAMPYVDKDV 185
Query: 580 DVWEKLMN 587
W ++N
Sbjct: 186 ATWNAMVN 193
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 228/424 (53%), Gaps = 16/424 (3%)
Query: 361 KHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQAC 420
K D E + S N + G + G + A+ + + K + + T S + AC
Sbjct: 369 KAFDTMPEKTMESWN----AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSAC 424
Query: 421 GDAKALEEAKAVHEHV-ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSW 479
AL K +H + E L P V ++ MY++C S+ +A +F+ M +++ SW
Sbjct: 425 AQLGALSLGKWLHRIITEEDLEP-NVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSW 483
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+ MI G+ +G G +A+ ++ A L P F+ V ACS G V EG F SM+
Sbjct: 484 NAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTD 543
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP-DVDVWEKLMNLCRMHGNLELG 598
DY I P ++H +VD+LG G L EA E I + P VW L+ C +H + +L
Sbjct: 544 DYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603
Query: 599 DRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSK 649
++ + +LDP S L+ K + AK ++ K L+E+ +K
Sbjct: 604 KLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNK 663
Query: 650 VHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERL 709
H + AGD +HP+++ IY+ + L A+M EAGY PET L+D+++E KE + HSE+L
Sbjct: 664 PHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKL 723
Query: 710 AVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
A++ GLLS+ IRI+KNLRVC DCH+A K ISK+ R +++RDA RFHHF+DG+CSC
Sbjct: 724 AIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSC 783
Query: 770 RDYW 773
DYW
Sbjct: 784 GDYW 787
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 35/237 (14%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D T + ++ A + + + VH E+ G++ +YS+C ++ A +F
Sbjct: 211 DATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLF 270
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG-DV 527
M + DL +++ +I+G++ NG+ +V++F++ GL P+ + + S G D+
Sbjct: 271 DMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDL 330
Query: 528 VEGMLH---------------------------FESMSKDYGIVP--SMKHYVSIVDMLG 558
+ LH ES K + +P +M+ + +++
Sbjct: 331 LAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYA 390
Query: 559 STGYLDEALEFIEKMP---MEPDVDVWEKLMNLCRMHGNLELGDRCAEIV--EQLDP 610
G + A+ E+M + P+ ++ C G L LG I+ E L+P
Sbjct: 391 QNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEP 447
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-L 507
+ + K+Y +D A VF + D W+T++ G + G +AV+ F++ G +
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMVCDGSV 208
Query: 508 KPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEAL 567
+PD V A + + DV G S ++ G+ ++ + G ++ A
Sbjct: 209 RPDATTLASVLPAAAEVADVTMGRC-VHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267
Query: 568 EFIEKMPMEPDVDVWEKLMN 587
+ M +PD+ + L++
Sbjct: 268 CLFDMME-KPDLVAYNALIS 286
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 224/388 (57%), Gaps = 25/388 (6%)
Query: 404 QCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--LLSPLRVSTYNGILKMYSECDSM 461
Q + D F ++ AC D ALE+ K V E L S V T ++ +Y +C +
Sbjct: 449 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGT--AVVNLYGKCGEI 506
Query: 462 DDAFSVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
++ +F + R D+ W+ MI +A+ G +A+ +F + + G++PD F+ + A
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 566
Query: 521 CSALGDVVEGMLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
CS G +G +F SM+ +Y + +++H+ + D+LG G L EA EF+EK+P++PD
Sbjct: 567 CSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDA 626
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN--ASELAK----EK 633
W L+ CR H +L+ R E+ +L RL + G V ++ +EL K K
Sbjct: 627 VAWTSLLAACRNHRDLK---RAKEVANKL--LRLEPRCATGYVALSNIYAELQKWHAVAK 681
Query: 634 ENKKLASQNL--------LEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPE 685
K +A Q + +E+ +H++ GD +HP +I + L +QMKE GY+P+
Sbjct: 682 VRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPD 741
Query: 686 TRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISK 745
T+ VLH +D++ KE L +HSERLA++ GL+S+P P+R+ KNLRVC DCH+A K+ISK
Sbjct: 742 TKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISK 801
Query: 746 IVGRELIIRDAKRFHHFKDGLCSCRDYW 773
I GR++++RD RFH FKDG CSC+DYW
Sbjct: 802 IAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE-HVERLLSPLRVSTYNGILKMYSECD 459
LEKQ + + T+++L+Q C A+AL E + +H V+ L P + N I+ MY+ CD
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
S DA + F + +R+L SW ++ FA +G ++ + + +Q G++PD FI
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 520 ACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD 578
+C + +G+ +H + I P + + ++++M G L A KM +
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSN--ALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 579 VDVWEKLMNLCRMHGNL 595
V W + +HGN+
Sbjct: 212 VISWSIMAGAHALHGNV 228
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L V + K+AI+ L ++ + D T+ L+ AC A+ + + +H+ +
Sbjct: 322 LSAYVHNDRGKDAIQ---LYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL 378
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
V N ++ MY++C S +A +VF M +R + SW T+I+ + + L +A +F Q
Sbjct: 379 EKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQ 438
Query: 502 FKQA-------GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIV 554
+ +KPD F+ + +AC+ + + +G + E + G+ ++V
Sbjct: 439 MLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVV 497
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNL 588
++ G G ++E + + PDV +W ++ +
Sbjct: 498 NLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAV 531
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 345 GNIQNGMMASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGL 400
GN+ G + +C D A+A+ + L GLV G+ KE + L
Sbjct: 77 GNLILGNHIVSMYAHCDSPGD-AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALER 135
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSEC 458
+ + + D TF + +CGD ++L + +H+ V RL +VS N +L MY +C
Sbjct: 136 MRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVS--NALLNMYKKC 193
Query: 459 DSMDDAFSVFSNMTE-RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGV 517
S+ A VF+ M R++ SW M A +G +A+ F G+K + +
Sbjct: 194 GSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 253
Query: 518 FSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PME 576
SACS+ V +G L S G + +++ M G G ++EA + + M
Sbjct: 254 LSACSSPALVQDGRL-IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEAL 312
Query: 577 PDVDVWEKLMN 587
DV W +++
Sbjct: 313 RDVVSWNIMLS 323
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G V EA+ + I ++ AC +++ + +H + +
Sbjct: 226 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVA 285
Query: 449 NGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY C ++++A VF M E RD+ SW+ M++ + N G+DA+ ++ + +
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ--- 342
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV---SIVDMLGSTGY 562
L+ D ++ + SACS+ DV G +LH + ++ + K+ + ++V M G
Sbjct: 343 LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE-----KNVIVGNALVSMYAKCGS 397
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMN 587
EA +KM + W +++
Sbjct: 398 HTEARAVFDKMEQRSIIS-WTTIIS 421
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 222/373 (59%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ +C AL + K +H + + V+ + ++ MY++C + + VF +
Sbjct: 432 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 491
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++++ +W+ +I + +G G++A+D+ G+KP++ FI VF+ACS G V EG+
Sbjct: 492 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 551
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKLMNLCR 590
F M DYG+ PS HY +VD+LG G + EA + + MP + + W L+ R
Sbjct: 552 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 611
Query: 591 MHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASEL---AKEKENKKLAS 640
+H NLE+G+ A+ + QL+P+ N S AGL A+E+ KE+ +K
Sbjct: 612 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD-KATEVRRNMKEQGVRKEPG 670
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E +VH++ AGD+SHP+++K+ + L +M++ GY+P+T VLH+++++ KE
Sbjct: 671 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEI 730
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ G+L++ IR+ KNLRVC DCH A K ISKIV RE+I+RD +RFH
Sbjct: 731 LLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFH 790
Query: 761 HFKDGLCSCRDYW 773
FK+G CSC DYW
Sbjct: 791 RFKNGTCSCGDYW 803
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 392 KEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYN 449
KEA+ + +G+ E + + T + ++ AC + A +A+H V +R L R N
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQN 357
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK------ 503
++ MYS +D A +F M +RDL +W+TMITG+ + EDA+ + + +
Sbjct: 358 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 417
Query: 504 -----QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
+ LKP+ + + +C+AL + +G +H ++ + ++ ++VDM
Sbjct: 418 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMY 475
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G L + + +++P + +V W ++ MHGN
Sbjct: 476 AKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSN 470
F L++A D + +E K +H HV + + V+ N ++ +Y +C + VF
Sbjct: 12 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 71
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
++ER+ SW+++I+ E A++ F ++P + V +ACS L
Sbjct: 72 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L + ++ EA+E L + + + D T S ++ AC + L K +H + + S
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 246
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +++ G ++ MY C + VF M +R + W+ MI G+++N ++A+ +F
Sbjct: 247 -LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 500 SQFKQ-AGLKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYV-- 551
++ AGL + GV AC G + + G + + +D +V
Sbjct: 306 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD--------RFVQN 357
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++DM G +D A+ KM + D+ W ++
Sbjct: 358 TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 392
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 412 TFSQLMQACGDA---KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
T ++ AC + + L K VH + R L N ++ MY + + + +
Sbjct: 114 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLL 172
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ RDL +W+T+++ +N +A++ + G++PD+ V ACS L
Sbjct: 173 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 228
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 230/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EAI + ++ I + T ++ A ALE K +H + +
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+C S+D+A VF + +R+ +W +I FA +G EDA+ F
Sbjct: 301 IEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+AG+ P+D +IG+ SACS G V EG F M K G+ P ++HY +VD+LG
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G+L+EA E I MP+EPD +W+ L+ C+MH NL++G+R AE + +L P + S
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPH--DSGSYVA 478
Query: 621 LVPVNAS-----ELAKEK------ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + AS +A+ + + +K + +E+ +HE+ D SH + +I A+
Sbjct: 479 LSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAM 538
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GY P T V + D++ + AL HSE++AV+ GL+S+ + P++I+KN
Sbjct: 539 LGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKN 598
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH++LK+IS I R++I+RD KRFH F+ G CSC DYW
Sbjct: 599 LRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 124/312 (39%), Gaps = 62/312 (19%)
Query: 344 SGNIQNGMMASQVLNNCK---HEDDFAEASRSSQN-------NGTLEQLDGLVKEGKVKE 393
+G IQ+ + A++V+ C + D+A A N L L E E
Sbjct: 45 TGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSE 104
Query: 394 AIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
A+ + +L + + TF +++AC A L E K +H + + + ++
Sbjct: 105 ALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLV 164
Query: 453 KMYSECDSMDDAFSVFSN------------------------------------------ 470
+MY C M+DA+S+F
Sbjct: 165 RMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAK 224
Query: 471 -----MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
M +R + SW+ MI+G+A+NG +A+++F + + + + P+ + V A + +G
Sbjct: 225 NLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIG 284
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G +H + I + ++VDM G +DEAL+ E +P + + W
Sbjct: 285 ALELGKWIHLYAGKNKIEIDDVLGS--ALVDMYSKCGSIDEALQVFETLP-KRNAITWSA 341
Query: 585 LMNLCRMHGNLE 596
++ MHG E
Sbjct: 342 IIGAFAMHGRAE 353
>gi|297834310|ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 222/390 (56%), Gaps = 5/390 (1%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
L K+ +V E + ++++ I T + ++ AC AL K +H + +
Sbjct: 305 LSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALITGKEIHAQILKSKEKPD 364
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V N ++ MY +C ++ + VF M +DLT+W+T++ +A NG E+ +++F +
Sbjct: 365 VPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTTWNTILNCYAINGNIEEVINLFEWMIE 424
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
+G+ PD F+ + S CS G G+ FE M ++ + P+++HY +VD+LG G ++
Sbjct: 425 SGVAPDGITFVALLSGCSDTGLTEYGISLFERMKTEFRVSPALEHYACLVDILGRAGKIE 484
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA++ IE MP +P +W L+N CR+HGN+ +G EI L ++K
Sbjct: 485 EAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG----EIGTMLWLRTYIAEAKMWDNVD 540
Query: 625 NASELAKEKENKKLASQNLLEVRSKVHEYRA-GDTSHPETDKIYALIRGLRAQMKEAGYI 683
E+ K++ KK A + ++V+ K+ + A G +D+ + L+ ++++GY
Sbjct: 541 KIREMMKQRGIKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYS 600
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
P+T VLHD+D+E K + HSERLA ++ L+ + P+R+ KNLRVC DCHS +KI+
Sbjct: 601 PDTSVVLHDVDEETKANWVCGHSERLAATYSLIHTGEGVPVRVTKNLRVCADCHSWMKIV 660
Query: 744 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
S++ GR +++RD KRFHHF G+CSC+DYW
Sbjct: 661 SQVTGRVIVLRDTKRFHHFVAGICSCKDYW 690
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
+ S ++AC D K L + +H + + + YN +LK+Y E S DDA VF M
Sbjct: 231 SISVALKACVDLKDLRVGRGIHGQIVKRKEKVDQVVYNVLLKLYMERGSFDDARKVFDGM 290
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ER++ +W+++I+ +K + ++F + ++ + + ACS + ++ G
Sbjct: 291 SERNIVTWNSLISILSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALITGK 350
Query: 532 -LHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLC 589
+H + + SK+ VP + S++DM G G ++ + + M + D+ W ++N
Sbjct: 351 EIHAQILKSKEKPDVPLLN---SLMDMYGKCGDVEYSRRVFDGM-LTKDLTTWNTILNCY 406
Query: 590 RMHGNLE 596
++GN+E
Sbjct: 407 AINGNIE 413
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 27/163 (16%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCIS---VDLP-TFSQLMQACGDAKALEEAKAV------- 432
GL K K+ EA+ L+EK S + P ++ L+ AC AK+L +
Sbjct: 97 GLCKSTKLDEAVT---LIEKSSTSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLVLNN 153
Query: 433 --HEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS---WDTMITGFA 487
H +LLS L + ++S C +D A +F ++T+ L + W M G++
Sbjct: 154 PSLRHDPKLLSKL--------ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYS 205
Query: 488 KNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+NG DA+ ++ + ++P + AC L D+ G
Sbjct: 206 RNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVG 248
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 229/392 (58%), Gaps = 19/392 (4%)
Query: 399 GLLEKQCI------SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
G+L++ C+ D TF ++ +C + L + K +H + + VS + ++
Sbjct: 285 GVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLV 344
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MYS C + D+ F ERD+ W +MI + +G GE+A+ +F++ +Q L ++
Sbjct: 345 SMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEI 404
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + ACS G +G+ F+ M K YG+ ++HY +VD+LG +G L+EA I
Sbjct: 405 TFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRS 464
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV-------- 624
MP++ D +W+ L++ C++H N E+ R A+ V ++DP + S L +
Sbjct: 465 MPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQ--DSASYVLLANIYSSANRWQ 522
Query: 625 NASEL---AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
N SE+ K+K KK + +EV+++VH++ GD HP+ +I + L +++K G
Sbjct: 523 NVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQG 582
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
Y+P+T VLHD+D E KE+ L HSE+LA++ L+++P PIR+MKNLRVC DCH A+K
Sbjct: 583 YVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIK 642
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IS+I E+I+RD+ RFHHFK+G CSC DYW
Sbjct: 643 YISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GL K +EA+ + + + D + +++ C AL + VH +V +
Sbjct: 172 MVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCG 231
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + MY + SM D V + M + L +W+T+++G A+ G E +D +
Sbjct: 232 FECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYC 291
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESM 537
K AG +PD F+ V S+CS L + +G +H E++
Sbjct: 292 MMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAV 329
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 37/239 (15%)
Query: 380 EQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHE----- 434
EQ L +G ++EA E L + I + FS L+QAC K++ K +H
Sbjct: 43 EQFATLCSKGHIREAFE--SFLSE--IWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTS 98
Query: 435 ----------HVERLLS---------------PLR-VSTYNGILKMYSECDSMDDAFSVF 468
H+ L S P R + + N ++K Y +++ A ++F
Sbjct: 99 GCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLF 158
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVV 528
M +R++ +W+ M+TG K + E+A+ +FS+ + PD+ V C+ LG ++
Sbjct: 159 DEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALL 218
Query: 529 EGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
G + G ++ S+ M G + + I MP + + W LM+
Sbjct: 219 AGQ-QVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMP-DCSLVAWNTLMS 275
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 210/375 (56%), Gaps = 13/375 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSN 470
+F + AC + + K VH + P RVS N ++ MYS+C ++ DA VF
Sbjct: 348 SFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDT 407
Query: 471 MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
M E ++ S ++MI G+A++G+ +++ +F Q + P+ FI V SAC G V EG
Sbjct: 408 MPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG 467
Query: 531 MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+F M + + I P +HY ++D+LG G L EA IE MP P W L+ CR
Sbjct: 468 QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACR 527
Query: 591 MHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQ 641
HGN+EL + A QL+P S + + L +E+ KK
Sbjct: 528 KHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGC 587
Query: 642 NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL---HDIDQEGK 698
+ +E+ KVH + A DTSHP +I+ + + +MK+AGY+P+ R+ L +++ + K
Sbjct: 588 SWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEK 647
Query: 699 EEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKR 758
E LL HSE+LAV+ GL+S+ PI ++KNLR+CGDCH+A+K+IS I GRE+ +RD R
Sbjct: 648 ERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHR 707
Query: 759 FHHFKDGLCSCRDYW 773
FH FK+G CSC DYW
Sbjct: 708 FHCFKEGHCSCGDYW 722
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ + ++ + VD+ T + ++ A K L H + + +G++
Sbjct: 226 EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLI 285
Query: 453 KMYSECDS-MDDAFSVFSNMTERDLTSWDTMITGFAK-NGLGEDAVDIFSQFKQAGLKPD 510
+YS+C M + VF + DL W+TMI+GF++ L ED + F + + G PD
Sbjct: 286 DLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPD 345
Query: 511 DQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDEAL 567
D F+ V SACS L G +H ++ D +P + V ++V M G + +A
Sbjct: 346 DCSFVCVTSACSNLSSPSVGKQVHALAIKSD---IPYNRVSVNNALVAMYSKCGNVHDAR 402
Query: 568 EFIEKMP 574
+ MP
Sbjct: 403 RVFDTMP 409
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ + A+ + + + +D T S ++ ACGD L + +H V S
Sbjct: 120 GECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGL--VRQLHCFVVVCGYDCYASVN 177
Query: 449 NGILKMYSECDSMDDAFSVFSNMTE---RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N +L YS +++A VF M E RD SW+ MI ++ G +AV++F + +
Sbjct: 178 NAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRR 237
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG-STGYLD 564
GLK D V +A + + D+V GM F M G + ++D+ G +
Sbjct: 238 GLKVDMFTMASVLTAFTCVKDLVGGM-QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMV 296
Query: 565 EALEFIEKMPMEPDVDVWEKLMN 587
E + E++ PD+ +W +++
Sbjct: 297 ECRKVFEEIA-APDLVLWNTMIS 318
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 404 QC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMD 462
QC + L TF L++AC + L K +H + L P N +YS+C S+
Sbjct: 2 QCTFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLH 61
Query: 463 DAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+A + F ++ S++T+I +AK+ L A +F + Q
Sbjct: 62 NAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQ 103
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 221/399 (55%), Gaps = 13/399 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ G+ EA+++ ++ + + T ++ A + AL ++ H R V
Sbjct: 265 VQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDV 324
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+ ++ MY++C A ++F M R++ SW+ MI G+A +G +AV +F ++
Sbjct: 325 YVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKC 384
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
KPD F V ACS G EG +F M + +GI P M+HY +V +LG +G LDE
Sbjct: 385 KQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDE 444
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A + I +MP EPD +W L+ CR++GN+ L + AE + QL+P N + L +
Sbjct: 445 AYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPG--NAGNYVLLSNIY 502
Query: 626 ASE--------LAKEKEN---KKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
AS+ + E +N KK + +E+++KVH AGD SHP I + L
Sbjct: 503 ASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLT 562
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M G+ P FVLHD++++ K+ L HSE+LAV+ GL+S+ P+R++KNLR+CG
Sbjct: 563 IEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICG 622
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH A+K IS RE+ +RD RFHHFKDG CSC DYW
Sbjct: 623 DCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ GL + G+ +A+ L + + D S + A GD K + K VH +V +
Sbjct: 125 VSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGC 184
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
L ++ MY +C D+ VF + D+ S + ++ G ++N +A+ +F +
Sbjct: 185 RLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFRE 244
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVP 545
F G++ + + + + C G +E + F +M + G+ P
Sbjct: 245 FICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEP 287
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
LP+ + A A+AL A V E P S+ +L Y + A SVF
Sbjct: 23 LPSALKSCPAQPLARALHAAAVVSGLAE---DPFVASS---LLHSYIRLGATGAARSVFD 76
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
M E+++ W +I G++ G E A + Q + AG++P+ + G+ S + G ++
Sbjct: 77 RMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALD 136
Query: 530 GMLHFESMSKDYGIVP 545
+ M + G P
Sbjct: 137 AVTALVRMHSE-GFFP 151
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 225/407 (55%), Gaps = 16/407 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV--ER 438
+D V+ G+ EA+ V + D +++ C ALE + VH + ER
Sbjct: 186 MIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAER 245
Query: 439 LLS-PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVD 497
L P V ++ MY +C M++A+ VF + D+ W+ MI G A NG G+ A++
Sbjct: 246 LGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALE 305
Query: 498 IFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDML 557
+F + G P++ F+ AC G V EG F SM +D+GI P +HY + D+L
Sbjct: 306 LFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSM-RDHGIEPRREHYGCLADLL 364
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------- 610
G G L+EA + MPMEP W LM+ C MH N+ +G+R + + +L+P
Sbjct: 365 GRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYV 424
Query: 611 SRLNEKSKAGLVPVNASELAK---EKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ N + GL +A L K E+ KK + +E VHE+R+GDT HP+T IY
Sbjct: 425 ALFNLYAVNGLWE-DAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRLIY 483
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDID-QEGKEEALLAHSERLAVSHGLLSSPARAPIRI 726
AL+ + +++ GY+ +T VL D+D +E K L HSERLA++ G+L+ P PIRI
Sbjct: 484 ALLEDMEQRLQLIGYVKDTSQVLLDMDNEEDKGNTLSYHSERLALAFGILNIPHDMPIRI 543
Query: 727 MKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+KNLRVC DCH K++SK+ RE+I+RD RFH F+DG+CSC D+W
Sbjct: 544 VKNLRVCRDCHVHAKLVSKLYQREIIVRDRHRFHLFRDGVCSCNDFW 590
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ L V ++N ++ Y +C ++ A VF M ER L SW MI + G +A+ +F
Sbjct: 145 TALDVVSWNTMVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFD 204
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVP-SMKHYVSIVDMLG 558
Q G KPD + + V C+ LG + G +H ++ G P ++ ++VDM
Sbjct: 205 QMTGNGFKPDAVVLVSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYC 264
Query: 559 STGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
G ++EA + + DV +W ++ M+G+ G R E+ ++
Sbjct: 265 KCGCMNEAWWVFDGV-QSHDVVLWNAMIGGLAMNGH---GKRALELFRRM 310
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 226/402 (56%), Gaps = 9/402 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V+ G+ +EA+++ + + +S D TFS ++A + + + +H ++ R
Sbjct: 413 MITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSG 472
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
V + + +L MY++C +D+A F M ER+ SW+ +I+ +A G ++A+ +F
Sbjct: 473 HMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFE 532
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
G KPD F+ V SACS G E M +FE M +YGI P +HY ++D LG
Sbjct: 533 GMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRV 592
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G D+ E + +MP E D +W +++ CR HGN +L AE + + +
Sbjct: 593 GRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILS 652
Query: 614 NEKSKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
N +KAG ++ +++ +K + +EV+ KV+ + + D ++P +I +
Sbjct: 653 NIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELE 712
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L +M + GY P+T L +D + K E+L HSERLA++ L+++P PIR+MKNL
Sbjct: 713 RLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLS 772
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
C DCHSA+K++SKIV R++I+RD+ RFHHFKDG CSC DYW
Sbjct: 773 ACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 402 EKQCISVD---LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSEC 458
E Q +S D LP ++ L+ G + K +H + L N ++ MYS+C
Sbjct: 331 EMQSLSFDRQALP-YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKC 389
Query: 459 DSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVF 518
+D A + F N ++ SW MITG +NG E+A+ +F ++AGL PD F
Sbjct: 390 GMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTI 449
Query: 519 SACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMP 574
A S L + G S G + S+ +++DM G LDEAL+ ++MP
Sbjct: 450 KASSNLAMIGLGR-QLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP 504
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G KEG EA+++ + ++ ++ TFS ++ L + VH V R S
Sbjct: 215 GCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSS- 273
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
V N +L YS+CD +D+ +F M ERD S++ MI G+A N + +F + +
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQ 333
Query: 504 QAGLKPDDQIFIGVFSACSA-----LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLG 558
+ + S + +G + L +S + +V + +++DM
Sbjct: 334 SLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSE-DLVGN-----ALIDMYS 387
Query: 559 STGYLDEA-LEFIEK 572
G LD A FI K
Sbjct: 388 KCGMLDAAKTNFINK 402
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERL-LSPLRVSTYNGILKMYSECDSMDDAFS 466
V + T L A G A ++H +L L V N +L Y + + A
Sbjct: 137 VTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARR 196
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
VF M RD +++ M+ G +K G +A+D+F+ ++ GL F V + + +GD
Sbjct: 197 VFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGD 256
Query: 527 VVEG 530
+ G
Sbjct: 257 LCLG 260
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 234/400 (58%), Gaps = 15/400 (3%)
Query: 387 KEGKVKEAIEVLG--LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
K GK EA+E+ +LE Q + + T ++QAC ALE+ + +H ++ R
Sbjct: 253 KNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSI 312
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY+ C ++ VF M +RD+ SW+++I+ + +G G+ A+ IF +
Sbjct: 313 LPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTY 372
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G++P F+ V ACS G V EG + F SM +GI PS++HY +VD+LG L+
Sbjct: 373 NGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLE 432
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPV 624
EA + IE M +EP VW L+ CR+H N+EL +R + + L+P+ N + L +
Sbjct: 433 EAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPT--NAGNYVLLADI 490
Query: 625 NA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
A +L + + +K+ ++ +EV+ K++ + + D +P ++++AL+ L
Sbjct: 491 YAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKL 550
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++KE GY+P+T+ VL+D+ KE +L HSE+LAV+ GL++S IRI K+LR+C
Sbjct: 551 SMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLC 610
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCHS K ISK +E+++RD RFHHF+DG+CSC DYW
Sbjct: 611 EDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 28/229 (12%)
Query: 370 SRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEA 429
+ S+ +N L Q L K+G + +A+E+L L T+ L+ +C +L +A
Sbjct: 36 TASTADNNKLIQ--SLCKQGNLTQALELLSLEPNPAQH----TYELLILSCTHQNSLLDA 89
Query: 430 KAVHEHVERLLS------PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+ VH H LL P + ++ MYS DS+D+A VF R + ++ +
Sbjct: 90 QRVHRH---LLENGFDQDPFLATK---LINMYSFFDSIDNARKVFDKTRNRTIYVYNALF 143
Query: 484 TGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-----LHFESMS 538
+ G GE+ ++++ + G+ D + V AC A V + +H +
Sbjct: 144 RALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILR 203
Query: 539 KDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
Y G V M ++VDM G + A +MP++ +V W ++
Sbjct: 204 HGYDGYVHIM---TTLVDMYAKFGCVSNASCVFNQMPVK-NVVSWSAMI 248
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 20/228 (8%)
Query: 406 ISVDLPTFSQLMQACGDAKA----LEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSM 461
I D T++ +++AC ++ L + + +H H+ R V ++ MY++ +
Sbjct: 167 IPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCV 226
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ--FKQAGLKPDDQIFIGVFS 519
+A VF+ M +++ SW MI +AKNG +A+++F + + L P+ + V
Sbjct: 227 SNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQ 286
Query: 520 ACSALGDVVEG-MLHFESMSKDY-GIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEP 577
AC+AL + +G ++H + K I+P + ++V M G L+ ++M +
Sbjct: 287 ACAALAALEQGRLIHGYILRKGLDSILPVIS---ALVTMYARCGKLELGQRVFDQMD-KR 342
Query: 578 DVDVWEKLMNLCRMHGNLELGDRCAEIVEQL-----DPSRLNEKSKAG 620
DV W L++ +HG G + I E++ +PS ++ S G
Sbjct: 343 DVVSWNSLISSYGVHG---FGKKAIGIFEEMTYNGVEPSPISFVSVLG 387
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 222/373 (59%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ +C AL + K +H + + V+ + ++ MY++C + + VF +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++++ +W+ +I + +G G++A+D+ G+KP++ FI VF+ACS G V EG+
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKLMNLCR 590
F M DYG+ PS HY +VD+LG G + EA + + MP + + W L+ R
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 591 MHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASEL---AKEKENKKLAS 640
+H NLE+G+ A+ + QL+P+ N S AGL A+E+ KE+ +K
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD-KATEVRRNMKEQGVRKEPG 757
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E +VH++ AGD+SHP+++K+ + L +M++ GY+P+T VLH+++++ KE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEI 817
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ G+L++ IR+ KNLRVC DCH A K ISKIV RE+I+RD +RFH
Sbjct: 818 LLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFH 877
Query: 761 HFKDGLCSCRDYW 773
FK+G CSC DYW
Sbjct: 878 RFKNGTCSCGDYW 890
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 392 KEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYN 449
KEA+ + +G+ E + + T + ++ AC + A +A+H V +R L R N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQN 444
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK------ 503
++ MYS +D A +F M +RDL +W+TMITG+ + EDA+ + + +
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 504 -----QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
+ LKP+ + + +C+AL + +G +H ++ + ++ ++VDM
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMY 562
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G L + + +++P + +V W ++ MHGN
Sbjct: 563 AKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F SRS + ++ L V+ ++EA+ + I D F L++A D +
Sbjct: 55 FISQSRSPE--WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 426 LEEAKAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
+E K +H HV + + V+ N ++ +Y +C + VF ++ER+ SW+++I+
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
E A++ F ++P + V +ACS L
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L + ++ EA+E L + + + D T S ++ AC + L K +H + + S
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +++ G ++ MY C + VF M +R + W+ MI G+++N ++A+ +F
Sbjct: 334 -LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 500 SQFKQ-AGLKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYV-- 551
++ AGL + GV AC G + + G + + +D +V
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD--------RFVQN 444
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++DM G +D A+ KM + D+ W ++
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 412 TFSQLMQACGD---AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
T ++ AC + + L K VH + R L N ++ MY + + + +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ RDL +W+T+++ +N +A++ + G++PD+ V ACS L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 227/403 (56%), Gaps = 10/403 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G K ++AI++ L++++ + + ++ +C ALE + HE+V +
Sbjct: 222 MINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSH 281
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MY C ++ A VF + ++D SW ++I G A +G A+ FS
Sbjct: 282 MTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFS 341
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + G P D V SACS G V +G+ +E+M +DYGI P ++HY IVDMLG
Sbjct: 342 QMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRA 401
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSR-------L 613
G L EA FI KMP++P+ + L+ C+++ N E+ +R ++ ++ P
Sbjct: 402 GKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLS 461
Query: 614 NEKSKAGLVPVNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAG-DTSHPETDKIYALI 670
N + AG S ++ KEK KK +L+E+ K++++ G D HPE KI L
Sbjct: 462 NIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLW 521
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
+ +++ GY T D+D+E KE A+ HSE+LA+++G++ + IRI+KNL
Sbjct: 522 EEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNL 581
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVC DCH+A K+IS++ GRE I+RD RFHHF++GLCSCRDYW
Sbjct: 582 RVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 402 EKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVE--------RLLS--PLR-VSTYNG 450
E +C+ V T SQ+++ E VH + R+ P R V ++
Sbjct: 131 EMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTS 190
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPD 510
++ Y +C ++DA +F M R+L +W MI G+AKN E A+D+F K+ G+ +
Sbjct: 191 MVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVAN 250
Query: 511 DQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFI 570
+ + + V S+C+ LG + G E + K + V ++ ++VDM G +++A+
Sbjct: 251 ETVMVSVISSCAHLGALEFGERAHEYVVKSHMTV-NLILGTALVDMYWRCGEIEKAIRVF 309
Query: 571 EKMPMEPDVDVWEKLMNLCRMHGN 594
E++P + D W ++ +HG+
Sbjct: 310 EELP-DKDSLSWSSIIKGLAVHGH 332
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 222/373 (59%), Gaps = 12/373 (3%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ +C AL + K +H + + V+ + ++ MY++C + + VF +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
++++ +W+ +I + +G G++A+D+ G+KP++ FI VF+ACS G V EG+
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 532 LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPD-VDVWEKLMNLCR 590
F M DYG+ PS HY +VD+LG G + EA + + MP + + W L+ R
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 591 MHGNLELGDRCAEIVEQLDPS-------RLNEKSKAGLVPVNASEL---AKEKENKKLAS 640
+H NLE+G+ A+ + QL+P+ N S AGL A+E+ KE+ +K
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD-KATEVRRNMKEQGVRKEPG 757
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E +VH++ AGD+SHP+++K+ + L +M++ GY+P+T VLH+++++ KE
Sbjct: 758 CSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEI 817
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
L HSE+LA++ G+L++ IR+ KNLRVC DCH A K ISKIV RE+I+RD +RFH
Sbjct: 818 LLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFH 877
Query: 761 HFKDGLCSCRDYW 773
FK+G CSC DYW
Sbjct: 878 RFKNGTCSCGDYW 890
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 392 KEAIEV-LGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHV-ERLLSPLRVSTYN 449
KEA+ + +G+ E + + T + ++ AC + A +A+H V +R L R N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF-VQN 444
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK------ 503
++ MYS +D A +F M +RDL +W+TMITG+ + EDA+ + + +
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 504 -----QAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
+ LKP+ + + +C+AL + +G +H ++ + ++ ++VDM
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS--ALVDMY 562
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G L + + +++P + +V W ++ MHGN
Sbjct: 563 AKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 366 FAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKA 425
F SRS + ++ L V+ ++EA+ + I D F L++A D +
Sbjct: 55 FISQSRSPE--WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 426 LEEAKAVHEHVERLLSPL-RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMIT 484
+E K +H HV + + V+ N ++ +Y +C + VF ++ER+ SW+++I+
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 485 GFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
E A++ F ++P + V +ACS L
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
L L + ++ EA+E L + + + D T S ++ AC + L K +H + + S
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 442 PLRVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L +++ G ++ MY C + VF M +R + W+ MI G+++N ++A+ +F
Sbjct: 334 -LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 500 SQFKQ-AGLKPDDQIFIGVFSACSALG-----DVVEGMLHFESMSKDYGIVPSMKHYV-- 551
++ AGL + GV AC G + + G + + +D +V
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD--------RFVQN 444
Query: 552 SIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
+++DM G +D A+ KM + D+ W ++
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 412 TFSQLMQACGD---AKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
T ++ AC + + L K VH + R L N ++ MY + + + +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+ RDL +W+T+++ +N +A++ + G++PD+ V ACS L
Sbjct: 260 GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 223/387 (57%), Gaps = 18/387 (4%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
++K + L T S L++AC ++ K +H R + ++ MYS+ S
Sbjct: 454 MQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGS 513
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F ++ +++L + M+TG A +G G +A+++F +GLKPD F + +A
Sbjct: 514 LVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTA 573
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C ++G V EG +F+SM YG+ P+ ++Y +VD+L GYLDEA++FIE+ P++P
Sbjct: 574 CRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGAS 633
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK---EKENKK 637
W L+ C +HGNL L + A + L+P S L+ +N E + E E+ K
Sbjct: 634 HWGALLTGCSIHGNLALAEVAARNLFILEPY----NSANYLLMMNLYEYERMYDEAESLK 689
Query: 638 LASQ----------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
A + + +++ +H + HPET +IY + L Q+K+AGY+P+T
Sbjct: 690 YAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTS 749
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPA-RAPIRIMKNLRVCGDCHSALKIISKI 746
+ +++ +E KE+ LL H+E+LA+++GL+ S A RAP+R+MKN R+C DCH K IS +
Sbjct: 750 CIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSL 809
Query: 747 VGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++I+RDA RFHHF DG CSC DYW
Sbjct: 810 CDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI V ++ + + D T ++++ ACG A AL E +AVH + +L +
Sbjct: 139 EAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLA 198
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+E + A V M + W+ ++ A+ GL +DA+++ ++ ++G +P+
Sbjct: 199 GMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVA 258
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE---F 569
+ V S CS G E + SM K G+ P S++ + +TG L +E F
Sbjct: 259 TWNTVLSGCSRHGRDREALGVVASMLKQ-GLRPDATTVSSLLKSVANTGLLRHGMEIHCF 317
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
+ +EPDV L+++ G L+ + + +E + + N
Sbjct: 318 FLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWN 362
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LL 440
L G + G+ +EA+ V+ + KQ + D T S L+++ + L +H R L
Sbjct: 264 LSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQL 323
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P V T ++ MY++C +D A V + R+LT+W++++ G+A G + A+++
Sbjct: 324 EP-DVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVE 382
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K+ L PD + G+ + S G + +L + K G+ P++ + S++
Sbjct: 383 LMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVSWTSLISGSCHN 441
Query: 561 GYLDEALEFIEKMP---MEPDVDVWEKLMNLC 589
G +++ F +M ++P + L+ C
Sbjct: 442 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 231/399 (57%), Gaps = 10/399 (2%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
G + G+ +EA+ + + ++V+ +FS ++ C ++ LE + +H +
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS 250
Query: 444 RVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFK 503
+ ++ +YS+C + A+ VF+ + ++L W+ M+ +A++ + +++F + K
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK 310
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G+KP+ F+ V +ACS G V EG +F+ M K+ I P+ KHY S+VDMLG G L
Sbjct: 311 LSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRL 369
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP-------SRLNEK 616
EALE I MP++P VW L+ C +H N EL A+ V +L P S N
Sbjct: 370 QEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAY 429
Query: 617 SKAGLV--PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
+ G A +L +++ KK + +E R+KVH + AG+ H ++ +IY + L
Sbjct: 430 AADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELG 489
Query: 675 AQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCG 734
+M++AGYI +T +VL ++D + K + + HSERLA++ GL++ PA PIR+MKNLRVCG
Sbjct: 490 EEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCG 549
Query: 735 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+A+K +S R +I+RD RFH F+DG CSC DYW
Sbjct: 550 DCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+ ++ MY++C + A +F M +R++ +W M+ G+A+ G E+A+ +F + L
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 509 PDDQIFIGVFSACS 522
+D F V S C+
Sbjct: 215 VNDYSFSSVISVCA 228
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 230/405 (56%), Gaps = 17/405 (4%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER--L 439
+DG ++ +++A+ + L +Q + + TFS +++ C LE+ +H V + L
Sbjct: 295 IDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL 354
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+S VS+ +L MY +C + + +F + +W+ I A++G G +A+ F
Sbjct: 355 ISDSFVSS--TLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAF 412
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +G++P+ F+ + +ACS G V EG+ +F SM +GI P +HY I+DM G
Sbjct: 413 DRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGR 472
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G LDEA +FI +MP++P+ W L+ CRM GN ELG+ A+ + +L+P N
Sbjct: 473 AGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPD--NTGVHV 530
Query: 620 GLVPVNAS-----------ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYA 668
L + AS +L ++ KKL + ++ K H + + D SHP+ +KIY
Sbjct: 531 SLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYE 590
Query: 669 LIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMK 728
+ L ++KE GY+P+TRF+ +++ K+ L HSER+AV+ L+S PA PI + K
Sbjct: 591 KLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKK 650
Query: 729 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
NLR+C DCHSALK ISK+ R++I+RD RFHHF G CSC DYW
Sbjct: 651 NLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 407 SVDLPTFSQL---MQACGDAKALEEAKAVHEHVERLLSPLRVSTY--NGILKMYSECDSM 461
S+D T +L +Q+CG A L + +H + L ST+ N ++ MYS C +
Sbjct: 11 SLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLV-LSGAAAASTFLANHLITMYSHCADV 69
Query: 462 DDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSAC 521
A +F M +L SW T+++G +N + DA+ FS +AGL P Q + +
Sbjct: 70 PSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVP-TQFALSSAARA 128
Query: 522 SALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDV 581
+A + G + ++ DM +G L EA ++MP + D
Sbjct: 129 AAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMP-QKDAVA 187
Query: 582 WEKLMNLCRMHGNLE 596
W +++ +GNLE
Sbjct: 188 WTAMIDGYAKNGNLE 202
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+DG K G ++ A+ + ++ + D ++ A G K A+A+H V +
Sbjct: 191 MIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKS 250
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFS-NMTERDLTSWDTMITGFAKNGLGEDAVDI 498
V+ N + MY++ MD+A V + ++ S ++I G+ + E A+ +
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDML 557
F + ++ G++P++ F + C+ + +G LH E + ++ +++DM
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTS--LISDSFVSSTLLDMY 368
Query: 558 GSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGN 594
G G + +++ +++ D+ W +N+ HG+
Sbjct: 369 GKCGLISLSIQLFKEIEYHTDI-AWNAAINVLAQHGH 404
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 454 MYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ- 512
MYS+ + +A VF M ++D +W MI G+AKNG E AV F ++ GL DQ
Sbjct: 163 MYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQH 222
Query: 513 IFIGVFSACSALGD-VVEGMLH-------FE-------SMSKDYGIVPSMKHYVSIV--- 554
+ V SA L D + +H FE +++ Y M + +V
Sbjct: 223 VLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKID 282
Query: 555 ----DMLGSTGYLDEALE----------FIE--KMPMEPDVDVWEKLMNLCRMHGNLELG 598
+++ +T +D +E FIE + +EP+ + ++ C M LE G
Sbjct: 283 QGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQG 342
Query: 599 DRC-AEIVEQ-------LDPSRLNEKSKAGLVPVNASELAKEKE 634
+ AE+++ + + L+ K GL+ ++ +L KE E
Sbjct: 343 AQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSI-QLFKEIE 385
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 233/432 (53%), Gaps = 31/432 (7%)
Query: 363 EDDFAE-ASRSSQNNGTLEQLDGLVKEGKVKEAIEVLG-LLEKQCISVDLPTFSQLMQAC 420
D FA SR S + T+ L V G+ EAI V +L Q D T ++ A
Sbjct: 163 RDFFARMPSRDSVSWNTV--LSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAI 220
Query: 421 GDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT-ERDLTSW 479
AL H +V R + + ++ MYS+C ++ A VF N+ +R L +W
Sbjct: 221 AYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTW 280
Query: 480 DTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSK 539
+ M+ GF NG E A+++F++ + L P+ F V +ACS G V EGM +F+ MS+
Sbjct: 281 NAMLAGFTANGYSERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSR 340
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGD 599
YGI P + HY +VD+ G ++A E I+ MPMEPD + + L+ CR H NLELG
Sbjct: 341 FYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGK 400
Query: 600 RCAEIVEQLDPSRLNEKSK---AGLVPVN--------------ASELAKEKENKKLASQN 642
+ RL E + AG V ++ +L ++ K +
Sbjct: 401 KVGH--------RLIEAAANDHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSS 452
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG-KEEA 701
+E+ +HE+ +GD SH IY ++ + Q+K +GY P+T VL DID E KE +
Sbjct: 453 SVELNGVIHEFISGDKSHSRKRDIYKMLGEICQQLKSSGYTPDTSQVLLDIDDEDVKESS 512
Query: 702 LLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHH 761
L HSE+LA++ GL+S+ PIR++ NLR+CGDCH+A+K+ISKI GR +I+RDA RFHH
Sbjct: 513 LALHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRDANRFHH 572
Query: 762 FKDGLCSCRDYW 773
F+ G CSC DYW
Sbjct: 573 FRKGSCSCGDYW 584
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 29/173 (16%)
Query: 451 ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAV-DIFSQFKQAGLKP 509
++ Y+ C + A VF T+ D+ +W+ ++ G+A+ G ED + D F++
Sbjct: 117 LVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSR---- 172
Query: 510 DDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEF 569
D + V S C G+ E + F M P VS+V + G L L
Sbjct: 173 DSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGL-- 230
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
W + + +C E+ E+L + +N SK G +
Sbjct: 231 ------------W----------AHAYVFRKCIEVEEKLSSALINMYSKCGFI 261
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 229/404 (56%), Gaps = 13/404 (3%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G + G EAI + ++ I + T ++ A ALE K +H + +
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++ MYS+C S+D A VF + +R+ +W +I FA +G EDA+ F
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFH 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+AG+ P+D +IG+ SACS G V EG F M K G+ P ++HY +VD+LG
Sbjct: 361 LMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRA 420
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAG 620
G+L+EA E I MP+EPD +W+ L+ C+MH NL++G+R AE + +L P + S
Sbjct: 421 GHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPH--DSGSYVA 478
Query: 621 LVPVNAS-----ELAKEK------ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
L + AS +A+ + + +K + +E+ +HE+ D SH + +I A+
Sbjct: 479 LSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAM 538
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + +++ GY P T V + D++ + AL HSE++AV+ GL+S+ + P++I+KN
Sbjct: 539 LGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKN 598
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LR+C DCH++LK+IS I R++I+RD KRFH F+ G CSC DYW
Sbjct: 599 LRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 62/312 (19%)
Query: 344 SGNIQNGMMASQVLNNCK---HEDDFAEASRSSQN-------NGTLEQLDGLVKEGKVKE 393
+G IQ+ + A++V+ C + D+A A N L L E E
Sbjct: 45 TGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSE 104
Query: 394 AIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
A+ + +L + + TF +++AC A L E K +H + + + ++
Sbjct: 105 ALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLV 164
Query: 453 KMYSECDSMDDAFSVFSN------------------------------------------ 470
+MY C M+DA+S+F
Sbjct: 165 RMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAK 224
Query: 471 -----MTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
M R + SW+ MI+G+A+NG +A+++F + + + + P+ + V A + +G
Sbjct: 225 NLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIG 284
Query: 526 DVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
+ G +H + I + ++VDM G +D+AL+ E +P + + W
Sbjct: 285 ALELGKWIHLYAGKNKVEIDDVLGS--ALVDMYSKCGSIDKALQVFETLP-KRNAITWSA 341
Query: 585 LMNLCRMHGNLE 596
++ MHG E
Sbjct: 342 IIGAFAMHGRAE 353
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 225/392 (57%), Gaps = 10/392 (2%)
Query: 392 KEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
+EA+ + + + ++ + TF+ ++ ACG+ ++ AK V + V NG+
Sbjct: 532 REALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGL 591
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
L +C S+++ + F M ++ SW+T I A++G G V++F + G+
Sbjct: 592 LCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGS 651
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
IGV S+CS G V +G +F +M DYG +HY ++D+L G+L+ A EF++
Sbjct: 652 VTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVK 711
Query: 572 KMPM-EPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAGLVP 623
++P + V W L+ C++HG+LE G R + + L+P N + AG P
Sbjct: 712 RLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWP 771
Query: 624 VNAS--ELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
A+ + E KK + +EV+ ++HE+R GDTSHP + +I+ + L +MK AG
Sbjct: 772 EAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAG 831
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
++ + + V++D+ + KE L HSE+LA++ GL+S+ A P+RIMKNLRVC DCHSA K
Sbjct: 832 FVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATK 891
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
IS +VGRE+++RDA RFHHF+ G CSC D+W
Sbjct: 892 FISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V+ + +EA + L+ +++D + + ACG + +LE+ K +H + +
Sbjct: 425 VENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKT 484
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
N ++ MY+ S++DA +F MT R++ SW M+ ++ GL +A+ IF
Sbjct: 485 PVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLE 544
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G+ P++ F V +AC L + L ++ + G +++ ++ LG G L+E
Sbjct: 545 GVAPNEVTFTAVLNACGNLASIPAAKL-VQACLSETGFFGNVEVANGLLCTLGKCGSLEE 603
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
F + M ++ V W + HGN G R E+ + +
Sbjct: 604 VANFFQVMAVKNQVS-WNTAIAANAQHGN---GVRGVELFQTM 642
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 13/223 (5%)
Query: 407 SVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNG--ILKMYSECDSMDDA 464
S D TF+ L+ C L + + +H + R + + V + G +L MY +C S ++A
Sbjct: 37 SADASTFAALIHKCARLHDLAQGRRIHGLILR--NGIEVGDFLGARLLAMYCKCGSPEEA 94
Query: 465 FSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+VF + ++ + +W ++I A++G ++A +F + + G+ P+D ++ V AC
Sbjct: 95 RAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHP 154
Query: 525 GDVVEGMLHFESM-SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+V E+ S + ++ + ++++ G G LD A + + + D VW
Sbjct: 155 WEVDTIRARVEACGSLELDVIVA----TAVMNAYGKCGDLDSAWGVFDGILVR-DAAVWN 209
Query: 584 KLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA 626
+++L H E GD E+ Q+ + + +NA
Sbjct: 210 AMISLLVAH---EQGDEALELFRQMRLGGVTPNKGTCVAALNA 249
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
LV + EA+E+ + ++ + T + AC ++ EA +H L
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDAD 274
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
++ MY + +DDA +F + ERD+ SW+ M+T A NG + A F +
Sbjct: 275 TVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLL 334
Query: 505 AGLKPDDQIFIGVFSAC 521
G P ++ + +AC
Sbjct: 335 VGELPSRITYVAILNAC 351
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERD-----LTSWDTMITGFAKNGLGEDAVDIFSQFK 503
I+ MYS C S AFS S + E+D + W+T+++ + +N E+A IF
Sbjct: 383 TAIMNMYSRCKSPKSAFSS-SLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLML 441
Query: 504 QAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
G+ D + VF+AC + + +G S+ + + ++V M G L
Sbjct: 442 LGGVTIDTVSLMTVFNACGSSASLEKGKW-IHSLLTESELTRKTPVQNALVTMYARLGSL 500
Query: 564 DEALEFIEKMPMEPDVDVWEKLMNL 588
++A E + M +V W ++ +
Sbjct: 501 EDAREIFDAMTTR-NVISWTAMVGV 524
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 234/424 (55%), Gaps = 33/424 (7%)
Query: 382 LDGLVKEGKVKEAIEVL-------------GLLEKQCISVD----LP---TFSQLMQACG 421
+ G + +G + EA +++ +LE SVD +P T L+ C
Sbjct: 439 ITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCA 498
Query: 422 DAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDT 481
A K +H + R ++ + ++ MY++C + A +VF + R++ +W+
Sbjct: 499 VLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNV 558
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
+I + +GLG++A+ +F + G P++ FI +ACS G V G+ F+ M +D
Sbjct: 559 LIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRD 618
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKM-PMEPDVDVWEKLMNLCRMHGNLELGD 599
YG P+ + +VD+LG G LDEA I M P E V W ++ CR+H N++LG
Sbjct: 619 YGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGR 678
Query: 600 RCAEIVEQLDPSR-------LNEKSKAGLVPVNASELAKEKENKKLASQ---NLLEVRSK 649
AE + +L+P N S AGL N++E+ + +A + + +E+
Sbjct: 679 IAAERLFELEPDEASHYVLLCNIYSAAGLWE-NSTEVRGMMRQRGVAKEPGCSWIELDGA 737
Query: 650 VHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERL 709
+H + AG+++HPE+ +++A + L +M+ GY+P+T VLHD+D+ K L HSE+L
Sbjct: 738 IHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKL 797
Query: 710 AVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 769
A++ GLL +P A IR+ KNLRVC DCH A K IS++VGRE+++RD +RFHHF+DG CSC
Sbjct: 798 AIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSC 857
Query: 770 RDYW 773
DYW
Sbjct: 858 GDYW 861
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 385 LVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLR 444
LV+ G+ +EA++VL + + D TF+ + AC + L + VH V + L
Sbjct: 235 LVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLK-DDDLA 293
Query: 445 VSTY--NGILKMYSECDSMDDAFSVFSNMTE--RDLTSWDTMITGFAKN-GLGEDAVDIF 499
+++ + ++ MY+ + + A VF + E R L W+ MI G+A++ G+ E+A+++F
Sbjct: 294 ANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELF 353
Query: 500 SQFK-QAGLKPDDQIFIGVFSACSALGDVVEG--MLHFESMSKDYGIVPSMKHYV--SIV 554
S+ + +AG P + GV AC A +V G +H + +D + +V +++
Sbjct: 354 SRMEAEAGCAPSETTMAGVLPAC-ARSEVFTGKEAVHGYVVKRDM----ASNRFVQNALM 408
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G +DEA + + D+ W L+ C + G
Sbjct: 409 DMYARLGRMDEAHTIFAMIDLR-DIVSWNTLITGCIVQG 446
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 389 GKVKEAIEVLGLLEKQ--CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVS 446
G +EAIE+ +E + C + T + ++ AC ++ +AVH +V +
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSE-TTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRF 402
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG 506
N ++ MY+ MD+A ++F+ + RD+ SW+T+ITG GL +A + + +
Sbjct: 403 VQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPS 462
Query: 507 --------------------LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPS 546
P++ + + C+ L G + + +
Sbjct: 463 SAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGK-EIHGYAVRHALESD 521
Query: 547 MKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVE 606
+ ++VDM G L A +++P +V W L+ MHG LGD + +
Sbjct: 522 LAVGSALVDMYAKCGCLALARAVFDRLPRR-NVITWNVLIMAYGMHG---LGDEALALFD 577
Query: 607 QL 608
++
Sbjct: 578 RM 579
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Query: 448 YNGILKMYSECDSMDDAFSVF--SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
+N +L MY+ +DDA +F S DL +W+TMI+ + G E+AV +
Sbjct: 195 FNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVAL 254
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G++PD F ACS L + G + KD + + ++VDM S +
Sbjct: 255 GVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSH 314
Query: 566 ALEFIEKMPME-PDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---SRLNEKSKAGL 621
A + +P + +W ++ HG ++ + E+ +++ +E + AG+
Sbjct: 315 ARRVFDMVPEHGRQLGMWNAMICGYAQHGGMD--EEAIELFSRMEAEAGCAPSETTMAGV 372
Query: 622 VPVNA-SELAKEKE 634
+P A SE+ KE
Sbjct: 373 LPACARSEVFTGKE 386
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 233/400 (58%), Gaps = 14/400 (3%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRV 445
V G EA+E+ L+++ + D + ++ A AL++ K +H + R L
Sbjct: 560 VHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEG 619
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S + ++ MY+ C +++ + +VF+ + +DL W +MI + +G G A+D+F + +
Sbjct: 620 SLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDE 679
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
+ PD F+ V ACS G + EG ESM +Y + P +HY +VD+LG +L+E
Sbjct: 680 SIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEE 739
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVN 625
A +F++ M +EP +VW L+ C++H N ELG+ A+ + ++DP N + + V
Sbjct: 740 AYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPE--NPGNYVLVSNVY 797
Query: 626 ASE-----------LAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLR 674
++E K KK + +EV +KVH + A D SHP++ +IY+ + +
Sbjct: 798 SAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQIT 857
Query: 675 AQM-KEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
++ KE GY+ +T+FVLH+ +E K + L HSERLA+++G+L++P A +RI KNLRVC
Sbjct: 858 EKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVC 917
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
GDCH+ K+ISK REL++RDA RFHHFK G+CSC D W
Sbjct: 918 GDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G+ EA+ + G ++K ++ + TF +QAC D+ +++ +H V + + V
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N ++ MY+ M +A ++F NM + D SW++M++GF +NGL +A+ + + + AG K
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380
Query: 509 PDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLG---STGYLD 564
PD I + +A + G+ + GM +H +M G+ ++ S+VDM S Y+D
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKN--GLDSDLQVGNSLVDMYAKFCSMKYMD 438
Query: 565 EALEFIEKMPMEPDVDVWEKLM 586
+KMP + DV W ++
Sbjct: 439 ---CIFDKMP-DKDVVSWTTII 456
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 13/217 (5%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL-L 440
+ G + G A+E+ ++ + I +D+ S ++ AC K + K +H ++ R L
Sbjct: 456 IAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL 515
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
S L + NGI+ +Y EC ++D A +F + +D+ SW +MI+ + NGL +A+++F
Sbjct: 516 SDLVLQ--NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 573
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGS 559
K+ G++PD + + SA ++L + +G +H + K + + S+ ++VDM
Sbjct: 574 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS--TLVDMYAR 631
Query: 560 TGYLDEA---LEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G L+++ FI D+ +W ++N MHG
Sbjct: 632 CGTLEKSRNVFNFIRN----KDLVLWTSMINAYGMHG 664
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 382 LDGLVKEGKVKEAIEVLG-LLEKQC---ISVDLPTFSQLMQACGDAKALEEAKAVHEHV- 436
L + K G V EA + L L Q S+D +S +++ CG KAL E + VH H+
Sbjct: 47 LREICKRGSVNEAFQSLTDLFANQSPSQFSLD-EAYSSVLELCGSKKALSEGQQVHAHMI 105
Query: 437 --ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGED 494
L + + +ST ++ MY +C + DA +F M + + +W+ MI + NG
Sbjct: 106 TSNALFNSVFLST--RLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLG 163
Query: 495 AVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM-LHFESMSKDYGIVPSMKHYVSI 553
+++++ + + +G+ D F + AC L D G +H ++ + Y + + + SI
Sbjct: 164 SLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVAN--SI 221
Query: 554 VDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMN 587
V M L+ A + ++MP + DV W +++
Sbjct: 222 VGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMIS 255
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
I +D TF +++ACG K VH + V N I+ MY++C+ ++ A
Sbjct: 176 IPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235
Query: 466 SVFSNMTER-DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSAL 524
+F M E+ D+ SW++MI+ ++ NG +A+ +F + ++A L P+ F+ AC
Sbjct: 236 QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS 295
Query: 525 GDVVEGM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
+ +GM +H + Y I + + +++ M G + EA M + D W
Sbjct: 296 SFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWN 352
Query: 584 KLMN 587
+++
Sbjct: 353 SMLS 356
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-- 438
L G V+ G EA++ + DL ++ A + +H + +
Sbjct: 354 MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNG 413
Query: 439 LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDI 498
L S L+V N ++ MY++ SM +F M ++D+ SW T+I G A+NG A+++
Sbjct: 414 LDSDLQVG--NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALEL 471
Query: 499 FSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYV---SIVD 555
F + + G+ D + + ACS L ++ + S Y I + V IVD
Sbjct: 472 FREVQLEGIDLDVMMISSILLACSGL-KLISSVKEIHS----YIIRKGLSDLVLQNGIVD 526
Query: 556 MLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
+ G G +D A E + + DV W +++ C +H L
Sbjct: 527 VYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVHNGL 564
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 223/387 (57%), Gaps = 18/387 (4%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
++K + L T S L++AC ++ K +H R + ++ MYS+ S
Sbjct: 454 MQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGS 513
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F ++ +++L + M+TG A +G G +A+++F +GLKPD F + +A
Sbjct: 514 LVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTA 573
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C ++G V EG +F+SM YG+ P+ ++Y +VD+L GYLDEA++FIE+ P++P
Sbjct: 574 CRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGAS 633
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK---EKENKK 637
W L+ C +HGNL L + A + L+P S L+ +N E + E E+ K
Sbjct: 634 HWGALLTGCSIHGNLALAEVAARNLFILEPY----NSANYLLMMNLYEYERMYDEAESLK 689
Query: 638 LASQ----------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
A + + +++ +H + HPET +IY + L Q+K+AGY+P+T
Sbjct: 690 YAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTS 749
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPA-RAPIRIMKNLRVCGDCHSALKIISKI 746
+ +++ +E KE+ LL H+E+LA+++GL+ S A RAP+R+MKN R+C DCH K IS +
Sbjct: 750 CIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSL 809
Query: 747 VGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++I+RDA RFHHF DG CSC DYW
Sbjct: 810 CDRQIILRDAVRFHHFVDGKCSCNDYW 836
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EAI V ++ + + D T ++++ ACG A AL E +AVH + +L +
Sbjct: 139 EAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLA 198
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+E + A V M + W+ ++ A+ GL +DA+++ ++ ++G +P+
Sbjct: 199 GMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVA 258
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE---F 569
+ V S CS G E + SM K G+ P S++ + +TG L +E F
Sbjct: 259 TWNTVLSGCSRHGRDREALGVVASMLKQ-GLRPDATTVSSLLKSVANTGLLRHGMEIHCF 317
Query: 570 IEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLN 614
+ +EPDV L+++ G L+ + + +E + + N
Sbjct: 318 FLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWN 362
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LL 440
L G + G+ +EA+ V+ + KQ + D T S L+++ + L +H R L
Sbjct: 264 LSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQL 323
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P V T ++ MY++C +D A V + R+LT+W++++ G+A G + A+++
Sbjct: 324 EP-DVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVE 382
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K+ L PD + G+ + S G + +L + K G+ P++ + S++
Sbjct: 383 LMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVSWTSLISGSCHN 441
Query: 561 GYLDEALEFIEKMP---MEPDVDVWEKLMNLC 589
G +++ F +M ++P + L+ C
Sbjct: 442 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 228/400 (57%), Gaps = 7/400 (1%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V+ + +EA++ L +L I + +F+ + AC L AK VH +
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + ++ +Y++C + + VF ++ D++ W+ MITGFA +GL +A+ +F
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S+ + + PD F+G+ + CS G + EG +F MS+ + I P ++HY ++VD+LG
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRL 613
G + EA E IE MP+EPDV +W L++ R + N ELG+ + + + S +
Sbjct: 315 AGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNI 374
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
+K EL ++ +K ++ LE +H ++AGDTSH ET IY ++ GL
Sbjct: 375 YSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 434
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+ K G++ +T VL D+ +E KEE L HSE+LA+++ +L S IRI KN+R+C
Sbjct: 435 IQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMC 494
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ +K +SK++ R +I+RD RFH F+DGLCSCRDYW
Sbjct: 495 SDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACS 522
A V N +++++ +W+ MI G+ +N E+A+ + +KP+ F +AC+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
LGD+ S+ D GI + ++VD+ G + + E + DV +W
Sbjct: 177 RLGDLHHAK-WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIW 234
Query: 583 EKLMNLCRMHG 593
++ HG
Sbjct: 235 NAMITGFATHG 245
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/378 (37%), Positives = 215/378 (56%), Gaps = 10/378 (2%)
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+SV TFS + AC ++E VH + + RV+ N ++ MY++C + A
Sbjct: 445 VSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQ 504
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+VF+ M D+ SW+ +I+G++ +GLG A+ IF K + KP+ F+GV S CS G
Sbjct: 505 TVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAG 564
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
+ +G FESM D+GI P ++HY +V + G +G LD+A+ IE +P EP V +W +
Sbjct: 565 LIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAM 624
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENK 636
++ N E R AE + +++P S + +K + + KEK K
Sbjct: 625 LSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVK 684
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +E + VH + G + HP+ I ++ L + AGY+P+ VL D+D E
Sbjct: 685 KEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDE 744
Query: 697 GKEEALLAHSERLAVSHGLLSSP-ARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
K++ L HSERLA+++GL+ P +R I IMKNLR+C DCHSA+K+IS IV R+L+IRD
Sbjct: 745 EKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRD 804
Query: 756 AKRFHHFKDGLCSCRDYW 773
RFHHF G+CSC D+W
Sbjct: 805 MNRFHHFHAGVCSCDDHW 822
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
TF ++A A AK+VH + + L G+L++Y++ M DAF VF+ M
Sbjct: 249 TFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA-----CSALGD 526
+ D+ W MI F +NG AVDIF + ++ + P++ + + CS LG+
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVS--IVDMLGSTGYLDEALEFIEKM 573
+ G++ D YVS ++D+ +D A++ ++
Sbjct: 369 QLHGLVVKVGFDLDV--------YVSNALIDVYAKCEKMDTAVKLFAEL 409
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T S ++ C K + +H V ++ L V N ++ +Y++C+ MD A +F+ +
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGM 531
+ +++ SW+T+I G+ G G A+++F + + + + F AC++L + G+
Sbjct: 410 SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGV 469
Query: 532 -LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCR 590
+H ++ + ++ + S++DM G + A +M DV W L++
Sbjct: 470 QVHGLAIKTNNAKRVAVSN--SLIDMYAKCGDIKVAQTVFNEME-TIDVASWNALISGYS 526
Query: 591 MHG 593
HG
Sbjct: 527 THG 529
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 450 GILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKP 509
++ YS C S+D A SVF + +D+ W +++ + +NG ED++ + S+ G P
Sbjct: 186 ALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMP 245
Query: 510 DDQIFIGVFSACSALGDV-VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
++ F A LG +H + + Y + P + V ++ + G + +A +
Sbjct: 246 NNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG--VGLLQLYTQLGDMSDAFK 303
Query: 569 FIEKMPMEPDVDVWEKLM 586
+MP + DV W ++
Sbjct: 304 VFNEMP-KNDVVPWSFMI 320
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 223/387 (57%), Gaps = 18/387 (4%)
Query: 401 LEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDS 460
++K + L T S L++AC ++ K +H R + ++ MYS+ S
Sbjct: 436 MQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGS 495
Query: 461 MDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSA 520
+ A +F ++ +++L + M+TG A +G G +A+++F +GLKPD F + +A
Sbjct: 496 LVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTA 555
Query: 521 CSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVD 580
C ++G V EG +F+ M YG+ P+ ++Y +VD+L GYLDEA++FIE+ P++P
Sbjct: 556 CRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGAS 615
Query: 581 VWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELAK---EKENKK 637
W L+ C +HGNL L + A + +L+P S L+ +N E + E E+ K
Sbjct: 616 HWGALLTGCSIHGNLALAEVAARNLFRLEPY----NSANYLLMMNLYEYERMYDEAESLK 671
Query: 638 LASQ----------NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETR 687
A + + +++ +H + HPET +IY + L Q+K+AGY+P+T
Sbjct: 672 YAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTS 731
Query: 688 FVLHDIDQEGKEEALLAHSERLAVSHGLLSSPA-RAPIRIMKNLRVCGDCHSALKIISKI 746
+ +++ +E KE+ LL H+E+LA+++GL+ S A RAP+R+MKN R+C DCH K IS +
Sbjct: 732 CIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSL 791
Query: 747 VGRELIIRDAKRFHHFKDGLCSCRDYW 773
R++I+RDA RFHHF DG CSC DYW
Sbjct: 792 CDRQIILRDAVRFHHFVDGKCSCNDYW 818
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER-LL 440
L G + G+ +EA+ V+ + KQ + D T S L+++ + L +H R L
Sbjct: 246 LSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQL 305
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P V T ++ MY++C +D A VF + R+LT+W++++ G+A G + A+++
Sbjct: 306 EP-DVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVE 364
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K+ L PD + G+ + S G + +L + K G+ P++ + S++
Sbjct: 365 LMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVSWTSLISGSCHN 423
Query: 561 GYLDEALEFIEKMP---MEPDVDVWEKLMNLC 589
G +++ F +M ++P + L+ C
Sbjct: 424 GEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 455
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDL 476
MQA G + +AVH + +L + MY+E + A V M +
Sbjct: 147 MQARGVPR--RRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSV 204
Query: 477 TSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFES 536
W+ ++ A+ GL +DA+++ ++ ++G +P+ + V S CS G E + S
Sbjct: 205 VPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVAS 264
Query: 537 MSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE---FIEKMPMEPDVDVWEKLMNLCRMHG 593
M K G+ P S++ + +TG L +E F + +EPDV L+++ G
Sbjct: 265 MLKQ-GLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCG 323
Query: 594 NLELGDRCAEIVEQLDPSRLN 614
L+ + + +E + + N
Sbjct: 324 RLDCAQKVFDALEHRNLTTWN 344
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 230/403 (57%), Gaps = 14/403 (3%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQ-CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ GLV+ +EAIEV ++ Q ++ D T + ACG AL+ AK ++ ++E+
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L V ++ M+S C + A S+F+++T RD+++W I A G E A+++F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ GLKPD F+G +ACS G V +G F SM K +G+ P HY +VD+LG
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL------- 613
G L+EA++ IE MPMEP+ +W L+ CR+ GN+E+ AE ++ L P R
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 614 NEKSKAG----LVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYAL 669
N + AG + V S KEK +K + +++R K HE+ +GD SHPE I A+
Sbjct: 681 NVYASAGRWNDMAKVRLS--MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAM 738
Query: 670 IRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
+ + + G++P+ VL D+D++ K L HSE+LA+++GL+SS IRI+KN
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKN 798
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
LRVC DCHS K SK+ RE+I+RD RFH+ + G CSC D+
Sbjct: 799 LRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 368 EASRSSQNNGTLEQLDGLVK----EGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDA 423
E +S++ GT + L++ G EAI + + IS D TF + AC +
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMI 483
+A +H + ++ + N ++ Y+EC +D A VF M+ER++ SW +MI
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 484 TGFAKNGLGEDAVDIFSQF-KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYG 542
G+A+ +DAVD+F + + + P+ + V SAC+ L D+ G + + ++ G
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSG 266
Query: 543 IVPSMKHYVSIVDMLGSTGYLDEA 566
I + ++VDM +D A
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVA 290
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVER------- 438
V++G +EA+ V L+ + D + + +C + + K+ H +V R
Sbjct: 313 VRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 439 ------------------------LLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTER 474
+S V T+N I+ Y E +D A+ F M E+
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 475 DLTSWDTMITGFAKNGLGEDAVDIFSQFK-QAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
++ SW+T+I+G + L E+A+++F + Q G+ D + + SAC LG +
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ + K+ GI ++ ++VDM G + A+ + DV W
Sbjct: 493 YYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%)
Query: 412 TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM 471
T ++ AC + LE + V+ + + + ++ MY +C+++D A +F
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 472 TERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEG 530
+L + M + + + GL +A+ +F+ +G++PD + S+CS L +++ G
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 216/383 (56%), Gaps = 20/383 (5%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+L ++ + D T+ L + C D A + + ++ L S N ++ MYS+C
Sbjct: 494 MLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCG 553
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+ +A VF + +D+ SW+ MITG++++G+G+ A++IF + G KPD ++ V S
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
CS G V EG +F+ M + + I P ++H+ +VD+LG G+L EA + I++MPM+P
Sbjct: 614 GCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTA 673
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS---------ELA 630
+VW L++ C++HGN EL + A+ V +LD + +A +L
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 631 KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVL 690
++K KK + +EV +KVH ++A D SHP+ I + L ++ GY+
Sbjct: 734 RDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYV------- 786
Query: 691 HDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRE 750
+ + + HSE+LAV+ GL+S PA PI IMKNLR+CGDCH+ +K+IS + GRE
Sbjct: 787 ----RTDSPRSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGRE 842
Query: 751 LIIRDAKRFHHFKDGLCSCRDYW 773
+IRDA RFHHF G CSC DYW
Sbjct: 843 FVIRDAVRFHHFNGGSCSCGDYW 865
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ L + G+V+EA++++ ++ + + +D T++ + AC +L K +H V R L
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++++Y++C +A VF+++ +R+ +W +I GF ++G ++V++F+
Sbjct: 301 PCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFN 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + D + S C + D+ G S+ G + ++ S++ M
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGR-QLHSLCLKSGQIQAVVVSNSLISMYAKC 419
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
L A E I + E D+ W ++ GN+
Sbjct: 420 DNLQSA-ESIFRFMNEKDIVSWTSMITAHSQVGNI 453
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L Y + +D A +F +M ERD+ SW+ M++ +++G +A+D+ + G++
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDE 565
D + +AC+ L + G LH + + +P + YV ++V++ G E
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRN----LPCIDPYVASALVELYAKCGCFKE 323
Query: 566 A 566
A
Sbjct: 324 A 324
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/264 (17%), Positives = 108/264 (40%), Gaps = 47/264 (17%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G E++E+ + + +++D + L+ C L + +H +
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS----------------------- 478
V N ++ MY++CD++ A S+F M E+D+ S
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462
Query: 479 --------WDTMITGFAKNGLGEDAVDIFS-QFKQAGLKPDDQIFIGVFSACS-----AL 524
W+ M+ + ++G ED + +++ + ++PD ++ +F C+ L
Sbjct: 463 MSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKL 522
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
GD + G + G++ +++ M G + EA + + + ++ D+ W
Sbjct: 523 GDQIIG------RTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNA 575
Query: 585 LMNLCRMHGNLELGDRCAEIVEQL 608
++ HG +G + EI + +
Sbjct: 576 MITGYSQHG---MGKQAIEIFDDI 596
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+N +L Y + + DA +F M RD+ SW+T+++G+ ++ +++ F +
Sbjct: 71 VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130
Query: 505 AG-LKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G P+ F +C ALG+ L M + +G ++VDM G +
Sbjct: 131 SGDSSPNAFTFAYAMKSCGALGERSLA-LQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 564 DEALEFIEKMPMEPDV 579
D A ++ EP +
Sbjct: 190 DLASRLFVRIK-EPTI 204
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/397 (36%), Positives = 228/397 (57%), Gaps = 24/397 (6%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ V+ G +EA+E+ +E Q + + T ++ AC E + VH ++ER
Sbjct: 209 ITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRI 268
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAK------------N 489
++ N +L MY++C S++DA +F M E+D+ SW TM+ G+AK +
Sbjct: 269 XESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMH 328
Query: 490 GLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKH 549
G G+DA+ +FS+ ++ +KP+ F + ACS +G V EG F M YG++P +KH
Sbjct: 329 GHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKH 388
Query: 550 YVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR-CAEIVEQL 608
Y +VD+LG G L+EA+E IEKMPM P VW L+ C +H N+ L ++ C++++E L
Sbjct: 389 YACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIE-L 447
Query: 609 DP---------SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTS 659
+P S + K+ +L ++ KK + +EV VHE+ GD S
Sbjct: 448 EPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNS 507
Query: 660 HPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEG-KEEALLAHSERLAVSHGLLSS 718
HP KIYA + + A+++ GY+P +L +++E KE+AL HSE+LA++ GL+S+
Sbjct: 508 HPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLIST 567
Query: 719 PARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRD 755
PIRI+KNLRVCGDCHS K++SK+ RE+++RD
Sbjct: 568 GQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRD 604
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 407 SVDLP---TFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDD 463
S D P TF L++A + + L KA H V ++L V N ++ Y++C +
Sbjct: 130 SPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGL 189
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA 523
+ VF N RD+ SW++MIT F + G E+A+++F + + +KP+ +GV SAC+
Sbjct: 190 GYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAK 249
Query: 524 LGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
D G + ++ I S+ +++DM G +++A +KMP E D+ W
Sbjct: 250 KSDFEFGRWVHSYIERNR-IXESLTLSNAMLDMYTKCGSVEDAKRLFDKMP-EKDIVSWT 307
Query: 584 KLM 586
++
Sbjct: 308 TML 310
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 227/391 (58%), Gaps = 13/391 (3%)
Query: 396 EVLGLLEKQ----CISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGI 451
E L L E C + ++ AC A + H + + ++ L V+ +
Sbjct: 216 ECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSL 275
Query: 452 LKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
+ MY +C S+ +F NMT ++ S+ +I+G +G G A+ IFS+ + GL+PDD
Sbjct: 276 MDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDD 335
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
++ V SACS G V EG+ F+ M +Y I P+M+HY +VD+ G G L+EA + ++
Sbjct: 336 VTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQ 395
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL---DPS---RLNEKSKAGLVPVN 625
MP++ + +W L++ C++H NL+LG+ AE + +L +PS L+ N
Sbjct: 396 SMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWEN 455
Query: 626 ASELAKEKENKKLASQ---NLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGY 682
A+++ + N+ L +L+EV+SKV+++ + D S+ ++ IY +I + Q++ GY
Sbjct: 456 AAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGY 515
Query: 683 IPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKI 742
+P+T V+ D+D+E K E L HS++LA++ L+ + + IRI++NLR+C DCHS K+
Sbjct: 516 MPDTSQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKL 575
Query: 743 ISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+S I RE+ +RD RFHHFKDG CSCRDYW
Sbjct: 576 VSMIYEREITVRDRNRFHHFKDGNCSCRDYW 606
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 423 AKALEEAKAVHEHVERLLSPLRVSTYNGILKM--YSECDSMDDAFSVFSNMTERDLTSWD 480
K+LEE K VH + + L + +L S+ +SMD A S+F + E ++
Sbjct: 42 CKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFN 101
Query: 481 TMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKD 540
TMI G+ N E+A+ +++ Q ++PD+ + V AC+ L + EGM
Sbjct: 102 TMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGM-QIHGHVFK 160
Query: 541 YGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDR 600
G+ + S+++M G ++ + +M + V W ++ H +L +
Sbjct: 161 LGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRME-QKSVASWSAII---AAHASLAMWWE 216
Query: 601 CAEIVEQLDPSR 612
C + E D SR
Sbjct: 217 CLALFE--DMSR 226
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY++C +++A++VFS++ E+++ W+ +++GF+++ +A+ F + +Q
Sbjct: 257 IFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQ 316
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ P+D +I V SACS LG V +G +F+ M + + + P++ HY +VD+LG G L
Sbjct: 317 MGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLH 376
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-NEKSKAGLVP 623
EA +FI++MP + +W L+ CR++ NLEL + A+ + +++P N + +
Sbjct: 377 EAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYA 436
Query: 624 VN--------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
N A L KE + KK ++ +E++ KVH + G+ +HP +IY + L
Sbjct: 437 ANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVG 496
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+MK+ GY +T LHD+++ K+E L HSE+LA++ G++ P APIRIMKNLR+CGD
Sbjct: 497 EMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGD 556
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHS +K+ S I RE+I+RD RFHHFK+G CSC ++W
Sbjct: 557 CHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++A+ + ++K+ S T S ++ AC + E K +H + V
Sbjct: 100 GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 159
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L +Y++C + DA VF M ER +W +M+ G+ +N L E+A+ +F + + GL+
Sbjct: 160 TALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLE 219
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
+ SAC+A ++EG +++S GI ++ S++DM G ++EA
Sbjct: 220 HNQFTISSALSACAARAALIEGK-QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278
Query: 569 FIEKMPMEPDVDVWEKLMN 587
+ E +V +W +++
Sbjct: 279 VFSSVE-EKNVVLWNAILS 296
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
L+Q+ +A E A H + R+ T N ++ MYS+C ++ A +F M
Sbjct: 23 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 82
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R L SW+TM+ +NG E A+ +F Q ++ G + V AC+A V E
Sbjct: 83 VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK- 141
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ + ++ +++D+ G + +A E MP DV W ++
Sbjct: 142 QLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMV 194
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 216/402 (53%), Gaps = 14/402 (3%)
Query: 384 GLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSP 442
G VK + +A+ V ++E + + T S ++ C + AL + VH+ +L
Sbjct: 206 GYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG 265
Query: 443 LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQF 502
++ +L MY +C +DDA +F M +D+ +W+ MI+G+A++G G A+ +F +
Sbjct: 266 RSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325
Query: 503 KQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGY 562
K G+ PD + V +AC G G+ FE+M + Y I P + HY +VD+L G
Sbjct: 326 KDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGL 385
Query: 563 LDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLV 622
L+ A+ I MP EP + L+ CR++ NLE + A + + DP N + L
Sbjct: 386 LERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQ--NAGAYVQLA 443
Query: 623 PVNA-----------SELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR 671
+ A K+ K + +E++ HE+R+ D HP+ D I+ +
Sbjct: 444 NIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLD 503
Query: 672 GLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLR 731
L MK GY P+ F LHD+++ K + L+ HSE+LA++ GL+S+ +RI KNLR
Sbjct: 504 RLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 563
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
+CGDCH+A K+ISKI RE+I+RD RFHHF+ G CSC DYW
Sbjct: 564 ICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 447 TYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
+YN +L + C +D A+ VFS M RD+TSW+TM++G +KNG E+A +F
Sbjct: 74 SYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMF 126
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 448 YNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAG 506
+ ++ Y + ++ A F M R+L SW+ ++ G+ KN DA+ +F + + A
Sbjct: 169 WTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAI 228
Query: 507 LKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
++P+ V CS L + G +H M G S+ S++ M G LD+
Sbjct: 229 VQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG--RSITVGTSLLSMYCKCGDLDD 286
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQL 608
A + ++M + D+ W +++ HG G + ++ E++
Sbjct: 287 ACKLFDEMHTK-DIVAWNAMISGYAQHGG---GRKAIKLFEKM 325
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 223/403 (55%), Gaps = 12/403 (2%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQC-ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G VK + ++A+ V + + + + T S ++ C + AL + VH+ +L
Sbjct: 216 VAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLP 275
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
RV+ ++ MY +C +D A +FS M RD+ +W+ MI+G+A +G G +A+++F
Sbjct: 276 LSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFE 335
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ K G++P+ F+ V +AC G GM FE M + YGI + HY +VD+L
Sbjct: 336 KMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRA 395
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCA-EIVEQLDPSRLNEKSKA 619
G L+ A+ I MP +P + L+N R++ N+E + A +++EQ +P +
Sbjct: 396 GSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQ-NPQNAGAYVQL 454
Query: 620 GLVPVNASELAKEKENKKLASQN---------LLEVRSKVHEYRAGDTSHPETDKIYALI 670
+ A++ A ++ N +E+ +H +R+ D HP+ I+ +
Sbjct: 455 ANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERL 514
Query: 671 RGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNL 730
L +MK GY+P+ F LHD+D+ K + L+ HSE+LA++ GLLS+ +RI KNL
Sbjct: 515 CQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNL 574
Query: 731 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
RVCGDCH+A K+ISKI RE+I+RD RFHHF+ G CSC DYW
Sbjct: 575 RVCGDCHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 20/251 (7%)
Query: 363 EDDFAEASRSSQNNGTL-EQLDGLVKEGKVKEAIEV-LGLLEKQCISVD--LPTFSQLMQ 418
D FA +++N + L GL + G V EA V L + + IS + + F+
Sbjct: 102 RDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGD 161
Query: 419 ACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTS 478
C + E+A V + ++ Y + ++ A F M R L S
Sbjct: 162 MCAAEECFEDAPDKENAV----------LWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVS 211
Query: 479 WDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESM 537
W+ ++ G+ KN EDA+ +F + + A ++P++ V CS L + G +
Sbjct: 212 WNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWC 271
Query: 538 SKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLEL 597
+K + + S+V M G LD A + +M + DV W +++ HG+
Sbjct: 272 TK-LPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIR-DVIAWNAMISGYAHHGD--- 326
Query: 598 GDRCAEIVEQL 608
G E+ E++
Sbjct: 327 GREAIELFEKM 337
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 424 KALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM--TERDLTSWDT 481
+ L +A+ + + + R P VS YN +L + + A +F+ M T R++TSW+T
Sbjct: 65 RLLADARHLFDRIPR---PDAVS-YNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNT 120
Query: 482 MITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSA-LGDVVEGMLHFE-SMSK 539
M++G +++G +A +F + + I +C A GD+ FE + K
Sbjct: 121 MLSGLSRSGAVGEARAVF-----LAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDK 175
Query: 540 DYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
+ ++ + ++V +G++++A++F E MP+ V
Sbjct: 176 ENAVL-----WTAMVSGYMDSGHVEKAMQFFEAMPVRSLV 210
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 228/401 (56%), Gaps = 15/401 (3%)
Query: 384 GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPL 443
GLV+ G+ + A+ + + I+ + T S +++AC LE+ K +H V + L
Sbjct: 322 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF--GL 379
Query: 444 RVSTYNG--ILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQ 501
+ Y G ++ Y +C S + A SVF+ + E D+ S ++MI +A+NG G +A+ +FS
Sbjct: 380 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 439
Query: 502 FKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTG 561
K GL+P++ ++GV SAC+ G + EG F S I + HY +VD+LG G
Sbjct: 440 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 499
Query: 562 YLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------SR 612
L EA I ++ + DV +W L++ CR+HG++E+ R V L P S
Sbjct: 500 RLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSN 558
Query: 613 LNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRG 672
L + + +E KK + + ++V ++H + AGD SHP I +
Sbjct: 559 LYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEE 618
Query: 673 LRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPAR-APIRIMKNLR 731
L ++KE GY+P+TRFVL D+D+E K +L HSE+LAV+ L S + IRI+KNLR
Sbjct: 619 LIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLR 678
Query: 732 VCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDY 772
VCGDCH+ +K +SKIVGR++I RD KRFHHF++GLCSC DY
Sbjct: 679 VCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 410 LPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFS 469
L +S L+Q C K++ + + H L S N ++ Y +C S+ A VF
Sbjct: 78 LQLYSSLIQQCIGIKSITDITKIQSHA--LKRGFHHSLGNKLIDAYLKCGSVVYARKVFD 135
Query: 470 NMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVE 529
+ R + +W++MI + +NG ++A+DI+ + G+ PD+ F VF A S LG V E
Sbjct: 136 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 195
Query: 530 GM-LHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
G H +S+ G V ++ ++VDM G + +A + + DV ++ L+
Sbjct: 196 GQRAHGQSVVLGVG-VSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALI 251
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 163/396 (41%), Gaps = 39/396 (9%)
Query: 386 VKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH-EHVERLLSPLR 444
++ G+ KEAI++ + I D TFS + +A D + E + H + V +
Sbjct: 153 IRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSN 212
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V + ++ MY++ M DA V + +D+ + +I G++ +G +++ +F +
Sbjct: 213 VFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTK 272
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G++ ++ V C L D+ G L + G+ S + S++ L G +
Sbjct: 273 KGIEANEYTLSSVLVCCGNLEDLTSGRL-IHGLIVKAGL-ESAVTWTSVIVGLVQNGREE 330
Query: 565 EALEFIEKM---PMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGL 621
AL +M + P+ ++ C LE G + IV + +++ A L
Sbjct: 331 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD-IDKYVGAAL 389
Query: 622 V----PVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIR------ 671
+ ++E+A+ N L +++ V S ++ Y H E ++++ ++
Sbjct: 390 IDFYGKCGSTEIARSVFN-GLLEVDVVSVNSMIYSYAQNGFGH-EALQLFSGMKDTGLEP 447
Query: 672 ------GLRAQMKEAGYIPETRFVLHDIDQEGKEEA----------LLAHSERLAVSHGL 715
G+ + AG + E + G E LL + RL + L
Sbjct: 448 NNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEML 507
Query: 716 LSSPARAPIRIMKNL----RVCGDCHSALKIISKIV 747
++ + + I + L R+ GD A +++++++
Sbjct: 508 INQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 543
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
+ + ++ MY++C +++A++VFS++ E+++ W+ +++GF+++ +A+ F + +Q
Sbjct: 284 IFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQ 343
Query: 505 AGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLD 564
G+ P+D +I V SACS LG V +G +F+ M + + + P++ HY +VD+LG G L
Sbjct: 344 MGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLH 403
Query: 565 EALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-NEKSKAGLVP 623
EA +FI++MP + +W L+ CR++ NLEL + A+ + +++P N + +
Sbjct: 404 EAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYA 463
Query: 624 VN--------ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRA 675
N A L KE + KK ++ +E++ KVH + G+ +HP +IY + L
Sbjct: 464 ANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVG 523
Query: 676 QMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGD 735
+MK+ GY +T LHD+++ K+E L HSE+LA++ G++ P APIRIMKNLR+CGD
Sbjct: 524 EMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGD 583
Query: 736 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
CHS +K+ S I RE+I+RD RFHHFK+G CSC ++W
Sbjct: 584 CHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 389 GKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTY 448
G ++A+ + ++K+ S T S ++ AC + E K +H + V
Sbjct: 127 GDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVG 186
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
+L +Y++C + DA VF M ER +W +M+ G+ +N L E+A+ +F + + GL+
Sbjct: 187 TALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLE 246
Query: 509 PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALE 568
+ SAC+A ++EG +++S GI ++ S++DM G ++EA
Sbjct: 247 HNQFTISSALSACAARAALIEGK-QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305
Query: 569 FIEKMPMEPDVDVWEKLMN 587
+ E +V +W +++
Sbjct: 306 VFSSVE-EKNVVLWNAILS 323
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 413 FSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMT 472
L+Q+ +A E A H + R+ T N ++ MYS+C ++ A +F M
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109
Query: 473 ERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGML 532
R L SW+TM+ +NG E A+ +F Q ++ G + V AC+A V E
Sbjct: 110 VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK- 168
Query: 533 HFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
+ + ++ +++D+ G + +A E MP DV W ++
Sbjct: 169 QLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVT-WSSMV 221
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 221/380 (58%), Gaps = 9/380 (2%)
Query: 393 EAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGIL 452
EA+E+ ++K I D T + ++ +CG+ AL K +HE ++R + N ++
Sbjct: 165 EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALM 224
Query: 453 KMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQ 512
MY+ C + +A VF +M RD+ SW ++I+ + ++G G +A+D+F + GL+PD
Sbjct: 225 DMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSI 284
Query: 513 IFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEK 572
F+ + +ACS G + G +F SM+ ++ I P ++HY +VD+LG G + EA +FI
Sbjct: 285 AFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMV 344
Query: 573 MPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAG-LVPV 624
MP++P+ VW L+ CR+H N+++G A+ + +L P + N ++AG V
Sbjct: 345 MPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADV 404
Query: 625 N-ASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI 683
+ + + K KKL + E+ +VH + GDTSHP++ IY + L +++E GY
Sbjct: 405 SMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYN 464
Query: 684 PETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKII 743
PE LHD+++E KE L HSE+LA++ L+++ PIRI NLR C DCH A K+I
Sbjct: 465 PEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLI 524
Query: 744 SKIVGRELIIRDAKRFHHFK 763
S I GRE+I++D R H+ K
Sbjct: 525 STIAGREIILKDVNRIHYMK 544
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 21/201 (10%)
Query: 418 QACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLT 477
++C L + +H RL V + + MY+ C DDA+ +F M RD+
Sbjct: 20 KSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVV 79
Query: 478 SWDTMITGFAKNGLGEDAVDIFSQFKQAGL-KPDDQIFIGVFSACSALGDVVEGMLHFES 536
SW+ MI+GFA GL A+D+F + KPD + + G E
Sbjct: 80 SWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSM--------GKARVED 131
Query: 537 MSKDYGIVPSM--KHYVSIVDMLGSTGYLD-----EALEFIEKMP---MEPDVDVWEKLM 586
++ G+ M K +S ML Y + EA+E +M +EPD ++
Sbjct: 132 IALLKGVFDEMRFKGLISWNAMLAV--YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVL 189
Query: 587 NLCRMHGNLELGDRCAEIVEQ 607
C L LG R E++++
Sbjct: 190 PSCGEVSALSLGKRIHEVIKR 210
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 228/400 (57%), Gaps = 7/400 (1%)
Query: 381 QLDGLVKEGKVKEAIEVL-GLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERL 439
+ G V+ + +EA++ L +L I + +F+ + AC L AK VH +
Sbjct: 112 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 171
Query: 440 LSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF 499
L + ++ +Y++C + + VF ++ D++ W+ MITGFA +GL +A+ +F
Sbjct: 172 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 231
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
S+ + + PD F+G+ + CS G + EG +F MS+ + I P ++HY ++VD+LG
Sbjct: 232 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 291
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP------SRL 613
G + EA E IE MP+EPDV +W L++ R + N ELG+ + + + S +
Sbjct: 292 AGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNI 351
Query: 614 NEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGL 673
+K EL ++ +K ++ LE +H ++AGDTSH ET IY ++ GL
Sbjct: 352 YSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 411
Query: 674 RAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVC 733
+ K G++ +T VL D+ +E KEE L HSE+LA+++ +L S IRI KN+R+C
Sbjct: 412 IQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMC 471
Query: 734 GDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
DCH+ +K +SK++ R +I+RD RFH F+DGLCSCRDYW
Sbjct: 472 SDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 511
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 464 AFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIF-SQFKQAGLKPDDQIFIGVFSACS 522
A V N +++++ +W+ MI G+ +N E+A+ + +KP+ F +AC+
Sbjct: 94 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 153
Query: 523 ALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
LGD+ S+ D GI + ++VD+ G + + E + DV +W
Sbjct: 154 RLGDLHHAK-WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIW 211
Query: 583 EKLMNLCRMHG 593
++ HG
Sbjct: 212 NAMITGFATHG 222
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 217/369 (58%), Gaps = 13/369 (3%)
Query: 417 MQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNMTE-RD 475
+ AC DA A+E K +H +E+ VS N +L YS+C ++ A VF M E R
Sbjct: 276 LSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRS 335
Query: 476 LTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFE 535
+ SW +MI G A +G GE+A+ +F + +++G++PD FI + ACS G + +G +F
Sbjct: 336 IVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFY 395
Query: 536 SMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
M Y I P+++HY +VD+ G G LD+A EFI MP+ P +W L+ C +HGN+
Sbjct: 396 KMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNV 455
Query: 596 ELGDRCAEIVEQLDPSR-------LNEKSKAGL---VPVNASELAKEKENKKLASQNLLE 645
+L +R E + +LDP+ N + AG V + ++ NK +++E
Sbjct: 456 KLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKT-PGWSMIE 514
Query: 646 VRSKVHEYRAGDTSHPETDKIYALIRGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLA 704
V ++ + AG+ + T++ Y ++ + +++ E YIPE VLHDI+ E KE+++
Sbjct: 515 VDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSR 574
Query: 705 HSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKD 764
HSE+LAV+ G+ + IRI+KNLRVC DCH+ +K+ISK+ G E+++RD RFH FK
Sbjct: 575 HSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKT 634
Query: 765 GLCSCRDYW 773
G CSCRDYW
Sbjct: 635 GSCSCRDYW 643
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P R ++++N +L Y++ ++ A +F M +D SW TMI GFA NG +A F
Sbjct: 199 PFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFR 258
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
+ +Q G++P++ G SAC+ G + G + + K G + + +++D
Sbjct: 259 ELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKS-GFLWMVSVNNALLDTYSKC 317
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
G + A E+MP + + W ++ MHG
Sbjct: 318 GNVGMARLVFERMPEKRSIVSWTSMIAGLAMHG 350
>gi|242072952|ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
gi|241937595|gb|EES10740.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
Length = 317
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 200/320 (62%), Gaps = 17/320 (5%)
Query: 467 VFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGD 526
+FS M+ R+ SW+T+IT +++G G +A+D+F Q KQ GLKP+D FIGV +ACS +G
Sbjct: 2 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 61
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLM 586
V EG+ +F+SMS YG+ P+ HY +VD+LG G LD A F+++MP+ D VW L+
Sbjct: 62 VEEGLSYFKSMSNVYGLNPTPDHYACVVDILGRAGQLDRARRFVDEMPITADAMVWRTLL 121
Query: 587 NLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNA-------------SELAKEK 633
+ C++H N+E+G+ A+ + +L+P S + ++ NA ++ K++
Sbjct: 122 SACKVHKNIEIGELAAKHLLELEP----HDSASYVLLSNAYAVTGKWANRDQVRKMMKDR 177
Query: 634 ENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDI 693
+K ++ +E ++ VH + GD HP +D+IY + L ++ + GY E + H+
Sbjct: 178 GIRKEPGRSWIEAKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLAKIGYKQEKPNLFHEK 237
Query: 694 DQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELII 753
+QE K+ HSE+LAV+ GL++ P P+R++KNLRVC DCHS +K S++ RE+++
Sbjct: 238 EQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVL 297
Query: 754 RDAKRFHHFKDGLCSCRDYW 773
RD RFHHF G CSC DYW
Sbjct: 298 RDVYRFHHFNSGSCSCGDYW 317
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 224/404 (55%), Gaps = 11/404 (2%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G G EA L ++ I + + + ++ AC A A E K +H VE+
Sbjct: 237 MIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG 296
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TERDLTSWDTMITGFAKNGLGEDAVDIF 499
S N ++ YS+C ++ A VF NM R + SW ++I G A +G GE+A+ +F
Sbjct: 297 FLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLF 356
Query: 500 SQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ +++G++PD FI + ACS G V EG F M YGI P+++HY +VD+ G
Sbjct: 357 HEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGR 416
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
L +A EFI +MP+ P+ +W L+ C +HGN+E+ + + ++DP +
Sbjct: 417 AARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLL 476
Query: 620 GLVPVNASEL---------AKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALI 670
V A + E KK +++E+ ++ + AG+ + T++ + +
Sbjct: 477 SNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKL 536
Query: 671 RGLRAQMK-EAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKN 729
R + +++ EAGY P+ R VLHDI++E KE+++ HSE+LA + G+ P +RI+KN
Sbjct: 537 REIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKN 596
Query: 730 LRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
LRVCGDCH+ +K+ISK+ E+I+RD RFH FKDG CSCRDYW
Sbjct: 597 LRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 442 PLR-VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
P+R ++++NG+L Y++ + A VF M RD SW TMI GFA NG ++A F
Sbjct: 196 PVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFR 255
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYVSIVDMLGS 559
+ + ++ ++ GV SAC+ G G +LH + V S+ + +++D
Sbjct: 256 ELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNN--ALIDTYSK 313
Query: 560 TGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKA 619
G + A + MP+ + W ++ MHG C E QL +E ++
Sbjct: 314 CGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHG-------CGEEAIQL----FHEMEES 362
Query: 620 GLVP 623
G+ P
Sbjct: 363 GVRP 366
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 236/437 (54%), Gaps = 22/437 (5%)
Query: 348 QNGMM--ASQVLNNCKHEDDFAEASRSSQNNGTLEQLDGLVKEGKVKEAIEVLGLLEKQC 405
+NG+ A +V H +D + ++ SQ L + G EA+ + +++
Sbjct: 251 KNGLFDQARRVFELMPHRNDVSWSALISQ----------LAQYGNADEALGLFRMMQVSG 300
Query: 406 ISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAF 465
+ + + AC D L+ K++H + R L R+ ++ MYS+C S+ A
Sbjct: 301 LHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQ 359
Query: 466 SVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALG 525
+F + RDL SW+ MI +G G DA+ +F + K+ ++PD F + SA S G
Sbjct: 360 MLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSG 419
Query: 526 DVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKL 585
V EG F M +YGI P KH V IVD+L +G ++EA + + +P + + L
Sbjct: 420 LVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVAL 479
Query: 586 MNLCRMHGNLELGDRCAEIVEQLDP---------SRLNEKSKAGLVPVNASELAKEKENK 636
++ C + LELG+ AE + +L P S L +K +L K+ +K
Sbjct: 480 LSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSK 539
Query: 637 KLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQE 696
K + +E+R +H + D SHP+ +I ++ L ++M++ GYIP+T FV HD+++
Sbjct: 540 KAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEG 599
Query: 697 GKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDA 756
KE+ L HSERLA + GLL++ + ++KNLRVCGDCH A+K +SKI RE+++RDA
Sbjct: 600 VKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDA 659
Query: 757 KRFHHFKDGLCSCRDYW 773
KRFHHFKDG CSC DYW
Sbjct: 660 KRFHHFKDGACSCGDYW 676
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 409 DLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSVF 468
D TF+ + AC L + V + + + +L +Y++C +MDDA VF
Sbjct: 102 DSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVF 161
Query: 469 SNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDV- 527
M +RD +W TM+TGF G A++++ + ++ GL+ D+ + +GV AC+A GD
Sbjct: 162 DRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDAR 221
Query: 528 ----VEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWE 583
V G L +M D I S+VDM G D+A E MP DV W
Sbjct: 222 MGASVHGYLLRHAMQMDVVI------STSLVDMYAKNGLFDQARRVFELMPHRNDVS-WS 274
Query: 584 KLMNLCRMHGN 594
L++ +GN
Sbjct: 275 ALISQLAQYGN 285
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ G V G+ +AIE+ + + + D +MQAC +VH ++ R
Sbjct: 175 MVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHA 234
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ V ++ MY++ D A VF M R+ SW +I+ A+ G ++A+ +F
Sbjct: 235 MQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFR 294
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEG------MLHFESMSKDYGIVPSMKHYVSIV 554
+ +GL P+ +G ACS LG + G +L + + G +++
Sbjct: 295 MMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVG--------TAVI 346
Query: 555 DMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
DM G L A +K+ + D+ W ++ C HG
Sbjct: 347 DMYSKCGSLSSAQMLFDKV-VSRDLISWNVMIACCGAHG 384
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 224/406 (55%), Gaps = 17/406 (4%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
++G + G ++A+E + ++ + T + AC AL+ +H ++
Sbjct: 278 MVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNG 337
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
L + ++ MY++C +++ A VF E+ L W MI G+A +G A+ F
Sbjct: 338 FKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFE 397
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
K G KPD +F+ V +ACS G V EG+ F++M + Y I PSMKHY +VDMLG
Sbjct: 398 WMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRA 457
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDP---------- 610
G LDEAL+FI MP+ PD VW L CR H N+E+ + ++ + QL+P
Sbjct: 458 GRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLS 517
Query: 611 ---SRLNEKSKAGLVPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIY 667
+ + A V V+ + K+ + +EV K+H + AGD +H +IY
Sbjct: 518 NAYASVGRWDDAERVRVSMRDHGAHKD----PGWSFIEVDHKLHRFVAGDNTHNRAVEIY 573
Query: 668 ALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIM 727
+ + + A +E GY E VLH+I++E KEEAL HSE+LA++ G++S+ +RI+
Sbjct: 574 SKLDEISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIV 633
Query: 728 KNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
KNLRVC DCHS +K SK+ RE+I+RD KRFHHF DG+CSC DYW
Sbjct: 634 KNLRVCVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 446 STYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQA 505
S NG +KM M A +F M E+++ SW TM+ GF++NG E A++ F +
Sbjct: 246 SLINGFMKM----GDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEE 301
Query: 506 GLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
G +P+D + SAC+ +G + G+ +S + G ++ ++VDM G ++
Sbjct: 302 GARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN-GFKLNLVIGTALVDMYAKCGNIEH 360
Query: 566 ALEFIEKMPMEPDVDVWEKLMNLCRMHGNLE 596
A E + E + +W ++ +HG+
Sbjct: 361 A-EKVFHETKEKGLLIWSVMIWGWAIHGHFR 390
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 456 SECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFI 515
S +S+D A S+F ++ ++ +I G A+N E ++ F + + PD F
Sbjct: 85 SSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFP 144
Query: 516 GVFSACSALGD----------VVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDE 565
V + +AL + +++ L F+S + VS+VDM L
Sbjct: 145 FVLKSAAALSNGGVGRALHCGILKFGLEFDSFVR-----------VSLVDMYVKVEELGS 193
Query: 566 ALEFIEKMPMEP---DVDVWEKLMN-LCRM 591
AL+ ++ P V +W L++ CRM
Sbjct: 194 ALKVFDESPESVKNGSVLIWNVLIHGYCRM 223
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 215/385 (55%), Gaps = 24/385 (6%)
Query: 400 LLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECD 459
+L ++ + D T+ L + C D A + + ++ + S N ++ MYS+C
Sbjct: 494 MLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG 553
Query: 460 SMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFS 519
+ +A VF + +D+ SW+ MITG++++G+G+ A++IF + G KPD ++ V S
Sbjct: 554 RILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613
Query: 520 ACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDV 579
CS G V EG +F+ M + + I P ++H+ +VD+LG G+L EA + I+ MPM+P
Sbjct: 614 GCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTA 673
Query: 580 DVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS---------ELA 630
+VW L++ C++HGN EL + A+ V +LD + +A +L
Sbjct: 674 EVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLM 733
Query: 631 KEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYI--PETRF 688
++K KK + +EV +KVH ++A D SHP+ I + L ++ GY+ TR
Sbjct: 734 RDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRS 793
Query: 689 VLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVG 748
+H HSE+LAV+ GL++ P PI IMKNLR+CGDCH+ +K+IS + G
Sbjct: 794 EIH-------------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTG 840
Query: 749 RELIIRDAKRFHHFKDGLCSCRDYW 773
RE +IRDA RFHHF G CSC DYW
Sbjct: 841 REFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 381 QLDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLL 440
+ L + G+V+EA++++ ++ + + +D T++ + AC +L K +H V R L
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 441 SPLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFS 500
+ + ++++Y++ +A VF+++ +R+ +W +I+GF + G ++V++F+
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 360
Query: 501 QFKQAGLKPDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGST 560
Q + + D + S C + D+ G S+ G + ++ S++ M
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGR-QLHSLCLKSGQIQAVVVSNSLISMYAKC 419
Query: 561 GYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHGNL 595
L A E I + E D+ W ++ GN+
Sbjct: 420 DNLQSA-EAIFRFMNEKDIVSWTSMITAYSQVGNV 453
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 110/264 (41%), Gaps = 47/264 (17%)
Query: 382 LDGLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS 441
+ G ++ G E++E+ + + +++D + L+ C L + +H +
Sbjct: 343 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402
Query: 442 PLRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNG----------- 490
V N ++ MY++CD++ A ++F M E+D+ SW +MIT +++ G
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 462
Query: 491 ------------LG--------EDAVDIFS-QFKQAGLKPDDQIFIGVFSACS-----AL 524
LG ED + ++ + ++PD ++ +F C+ L
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 522
Query: 525 GDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEK 584
GD + G + G++ +++ M G + EA + + + ++ D+ W
Sbjct: 523 GDQIIG------RTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNA 575
Query: 585 LMNLCRMHGNLELGDRCAEIVEQL 608
++ HG +G + EI + +
Sbjct: 576 MITGYSQHG---MGKQAIEIFDDI 596
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 449 NGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLK 508
N +L Y + +D A +F +M ERD+ SW+ M++ +++G +A+D+ + G++
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 509 PDDQIFIGVFSACSALGDVVEG-MLHFESMSKDYGIVPSMKHYV--SIVDMLGSTGYLDE 565
D + +AC+ L + G LH + + +P + YV ++V++ +G E
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRN----LPHIDPYVASALVELYAKSGCFKE 323
Query: 566 A 566
A
Sbjct: 324 A 324
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 445 VSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQ 504
V T+N +L Y++ + DA +F M RD+ SW+T+++G+ ++ +++ F +
Sbjct: 71 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130
Query: 505 AGLK-PDDQIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYL 563
+G P+ +C ALG L +M + + + ++VDM G +
Sbjct: 131 SGDSWPNAFTLACAMKSCGALG-WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 564 DEALEFIEKMPMEP 577
D A ++ EP
Sbjct: 190 DLASRLFVRIK-EP 202
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 228/373 (61%), Gaps = 24/373 (6%)
Query: 417 MQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TE 473
+ AC AL+E ++VH+++ E+L S ++V N ++ MY++C SMD A+ VF NM +
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLNSNVQVC--NVVIDMYAKCGSMDKAYWVFENMRCD 269
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
+ L +W+TMI FA +G G A+D+F + ++G+ PD ++ V AC+ G V +G+
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKL 329
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
F SM++ G+ P++KHY S+VD+LG G L EA + + +P P++ +W+ L+ CR +G
Sbjct: 330 FNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYG 387
Query: 594 NLELGDRCAEIVEQL------DPSRLNEKSKA-------GLVPVNASELAKEKENKKLAS 640
++E+ + + + ++ D L+ A G V + + ++ KK
Sbjct: 388 DVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRV----RDAMRRRDVKKTPG 443
Query: 641 QNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEE 700
+ +E++ K++++ GD SH +IYA + + ++K GY +T VLHDI E KE
Sbjct: 444 FSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKEN 503
Query: 701 ALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFH 760
AL HSE+LAV+ GL + PI+++KNLR+CGDCH +K+ISKI RE+I+RD RFH
Sbjct: 504 ALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFH 563
Query: 761 HFKDGLCSCRDYW 773
FK+GLCSC+DYW
Sbjct: 564 RFKEGLCSCKDYW 576
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T S ++AC A A EA +H + R V +L Y++ +D A +
Sbjct: 101 IDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKL 160
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGD 526
F M + D+ SW+ +I GFA+ DA+ F + K G L+P+ G ACS LG
Sbjct: 161 FDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGA 220
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ EG ES+ K Y + + V ++DM G +D+A E M + + W
Sbjct: 221 LKEG----ESVHK-YIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
++ MHG+ G + ++ E+L ++G+ P S LA
Sbjct: 276 NTMIMAFAMHGD---GHKALDLFEKL--------GRSGMSPDAVSYLA 312
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 15/392 (3%)
Query: 395 IEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVHEHVERLLS-PLRVSTYNGILK 453
++VL L + D T L+ AC AL A+ H ++ S P+ + +L
Sbjct: 166 VQVLRLFRTM-RTADHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTNLATALLN 224
Query: 454 MYSECDSMDDAFSVFSNMTER--DLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDD 511
MY C + A S+F + R D+ +W MI G A NG DA+ +F+ K ++PD
Sbjct: 225 MYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQPDS 284
Query: 512 QIFIGVFSACSALGDVVEGMLHFESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIE 571
V SAC+ G V EG M DY + P+++HY VD+LG G L+EAL I
Sbjct: 285 VTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLEEALALIR 344
Query: 572 KMPMEPDVDVWEKLMNLCRMHGNLELGDRCAEIVEQLDPSRL-------NEKSKAG---L 621
+P + DV +W L+ CR H N E+G A + +LDP N + AG L
Sbjct: 345 AVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYAAAGKWDL 404
Query: 622 VPVNASELAKEKENKKLASQNLLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAG 681
V S + + + +K S +++E+ V+E+ +GD SHP++D+IYA++ + + G
Sbjct: 405 VQEVRSSMKQHRIHKPPGS-SVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKG 463
Query: 682 YIPETRFVLHDIDQEGKEEALLAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALK 741
+ P T+ V DID+E KE + HSE+LAV+ GL+++ A IRI+KNLR+C DCHS +K
Sbjct: 464 HKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMK 523
Query: 742 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 773
++S++ R +++RD RFHHFK G CSC DYW
Sbjct: 524 VVSEVYDRVIVVRDRNRFHHFKSGSCSCLDYW 555
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 228/371 (61%), Gaps = 20/371 (5%)
Query: 417 MQACGDAKALEEAKAVHEHV--ERLLSPLRVSTYNGILKMYSECDSMDDAFSVFSNM-TE 473
+ AC AL+E ++VH+++ E+L S ++V N ++ MY++C SMD A+ VF NM +
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLDSNVQVC--NVVIDMYAKCGSMDKAYWVFENMRCD 269
Query: 474 RDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAGLKPDDQIFIGVFSACSALGDVVEGMLH 533
+ L +W+TMI FA +G G A+D+F + ++G+ PD ++ V AC+ G V +G+
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKL 329
Query: 534 FESMSKDYGIVPSMKHYVSIVDMLGSTGYLDEALEFIEKMPMEPDVDVWEKLMNLCRMHG 593
F SM++ G+ P++KHY S+VD+LG G L EA + + +P P++ +W+ L+ CR +G
Sbjct: 330 FNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYG 387
Query: 594 NLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNAS-----------ELAKEKENKKLASQN 642
++E+ + + + ++ ++ L V A+ + + ++ KK +
Sbjct: 388 DVEMAELASR--KLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFS 445
Query: 643 LLEVRSKVHEYRAGDTSHPETDKIYALIRGLRAQMKEAGYIPETRFVLHDIDQEGKEEAL 702
+E++ K++++ GD SH +IYA + + ++K GY +T VLHDI E KE AL
Sbjct: 446 YIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENAL 505
Query: 703 LAHSERLAVSHGLLSSPARAPIRIMKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 762
HSE+LAV+ GL + PI+++KNLR+CGDCH +K+ISKI RE+I+RD RFH F
Sbjct: 506 CYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRF 565
Query: 763 KDGLCSCRDYW 773
K+GLCSC+DYW
Sbjct: 566 KEGLCSCKDYW 576
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 408 VDLPTFSQLMQACGDAKALEEAKAVHEHVERLLSPLRVSTYNGILKMYSECDSMDDAFSV 467
+D T S ++AC A A EA +H + R V +L Y++ +D A +
Sbjct: 101 IDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKL 160
Query: 468 FSNMTERDLTSWDTMITGFAKNGLGEDAVDIFSQFKQAG-LKPDDQIFIGVFSACSALGD 526
F M + D+ SW+ +I GFA+ DA+ F + K G L+P+ G ACS LG
Sbjct: 161 FDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGA 220
Query: 527 VVEGMLHFESMSKDYGIVPSMKHYV----SIVDMLGSTGYLDEALEFIEKMPMEPDVDVW 582
+ EG ES+ K Y + + V ++DM G +D+A E M + + W
Sbjct: 221 LKEG----ESVHK-YIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 583 EKLMNLCRMHGNLELGDRCAEIVEQLDPSRLNEKSKAGLVPVNASELA 630
++ MHG+ G + ++ E+L ++G+ P S LA
Sbjct: 276 NTMIMAFAMHGD---GHKALDLFEKL--------GRSGMSPDAVSYLA 312
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,717,721,781
Number of Sequences: 23463169
Number of extensions: 582660523
Number of successful extensions: 1337002
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7303
Number of HSP's successfully gapped in prelim test: 6848
Number of HSP's that attempted gapping in prelim test: 1216868
Number of HSP's gapped (non-prelim): 64809
length of query: 773
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 622
effective length of database: 8,816,256,848
effective search space: 5483711759456
effective search space used: 5483711759456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 81 (35.8 bits)