Query 004115
Match_columns 773
No_of_seqs 467 out of 3775
Neff 6.1
Searched_HMMs 46136
Date Thu Mar 28 17:48:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004115.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004115hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 1.6E-85 3.5E-90 746.7 48.6 388 228-646 53-441 (517)
2 PRK04750 ubiB putative ubiquin 100.0 1.4E-84 3E-89 743.5 52.5 416 231-684 50-471 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 1.1E-77 2.3E-82 677.2 39.4 428 185-645 2-432 (437)
4 KOG1235 Predicted unusual prot 100.0 6.3E-67 1.4E-71 592.5 36.2 383 230-637 91-485 (538)
5 KOG1236 Predicted unusual prot 100.0 1.7E-55 3.6E-60 473.7 26.8 378 230-636 118-555 (565)
6 KOG1234 ABC (ATP binding casse 100.0 2E-35 4.3E-40 304.8 14.5 349 254-631 2-353 (363)
7 PF03109 ABC1: ABC1 family; I 99.9 1.9E-27 4.2E-32 223.3 7.3 118 290-410 1-119 (119)
8 cd05145 RIO1_like RIO kinase f 99.8 4.4E-19 9.5E-24 178.8 15.7 180 306-520 3-187 (190)
9 KOG0595 Serine/threonine-prote 99.8 1.7E-18 3.7E-23 187.8 16.5 184 306-544 16-209 (429)
10 cd05147 RIO1_euk RIO kinase fa 99.8 2.8E-18 6.1E-23 173.6 17.0 181 306-520 3-187 (190)
11 PRK10359 lipopolysaccharide co 99.7 3.7E-16 7.9E-21 162.6 15.7 143 306-496 37-187 (232)
12 cd05144 RIO2_C RIO kinase fami 99.7 1E-15 2.2E-20 154.8 17.7 170 305-510 20-196 (198)
13 smart00090 RIO RIO-like kinase 99.7 5.1E-16 1.1E-20 162.5 16.0 186 306-528 34-226 (237)
14 KOG0616 cAMP-dependent protein 99.7 1.4E-15 3.1E-20 159.5 16.3 189 301-546 44-238 (355)
15 KOG0581 Mitogen-activated prot 99.6 2.6E-16 5.7E-21 169.4 9.5 177 306-540 85-268 (364)
16 KOG0605 NDR and related serine 99.6 1.4E-15 3.1E-20 169.7 15.6 196 301-546 141-385 (550)
17 KOG0592 3-phosphoinositide-dep 99.6 1.1E-15 2.3E-20 170.7 12.7 191 306-544 79-282 (604)
18 cd05119 RIO RIO kinase family, 99.6 8.7E-15 1.9E-19 145.5 16.9 164 306-502 3-173 (187)
19 KOG0192 Tyrosine kinase specif 99.6 6E-15 1.3E-19 163.3 14.9 185 307-543 48-240 (362)
20 PRK14879 serine/threonine prot 99.6 2.3E-14 5.1E-19 145.2 17.4 145 306-495 2-146 (211)
21 KOG0615 Serine/threonine prote 99.6 7.1E-16 1.5E-20 167.5 5.9 194 305-546 177-378 (475)
22 KOG0598 Ribosomal protein S6 k 99.6 8.1E-15 1.8E-19 157.9 12.9 191 300-544 24-220 (357)
23 cd05628 STKc_NDR1 Catalytic do 99.6 1.3E-14 2.9E-19 159.6 14.1 190 306-544 7-231 (363)
24 KOG0593 Predicted protein kina 99.6 1.5E-14 3.3E-19 152.1 13.7 183 306-543 8-196 (396)
25 KOG0661 MAPK related serine/th 99.6 3.2E-15 6.9E-20 164.9 8.7 184 306-542 16-203 (538)
26 KOG4250 TANK binding protein k 99.6 8.1E-15 1.8E-19 168.0 11.2 198 300-546 13-221 (732)
27 TIGR03724 arch_bud32 Kae1-asso 99.6 1.5E-13 3.2E-18 138.3 19.0 141 308-496 2-142 (199)
28 KOG0694 Serine/threonine prote 99.5 3.6E-14 7.9E-19 162.3 14.4 252 306-638 374-629 (694)
29 cd05600 STKc_Sid2p_Dbf2p Catal 99.5 4.2E-14 9.1E-19 153.4 14.2 183 306-544 7-193 (333)
30 cd05085 PTKc_Fer Catalytic dom 99.5 6.7E-14 1.5E-18 144.1 14.7 185 306-543 1-188 (250)
31 PTZ00263 protein kinase A cata 99.5 7E-14 1.5E-18 151.9 14.9 188 301-544 18-210 (329)
32 KOG4236 Serine/threonine prote 99.5 5.5E-15 1.2E-19 163.6 6.1 195 295-543 559-760 (888)
33 cd05599 STKc_NDR_like Catalyti 99.5 3.2E-14 7E-19 156.0 12.0 192 306-544 7-234 (364)
34 cd05084 PTKc_Fes Catalytic dom 99.5 6.8E-14 1.5E-18 144.4 13.6 186 306-543 1-190 (252)
35 KOG0583 Serine/threonine prote 99.5 4.7E-14 1E-18 156.9 13.3 186 306-544 23-218 (370)
36 KOG0575 Polo-like serine/threo 99.5 1.7E-14 3.6E-19 163.4 9.7 183 306-544 24-213 (592)
37 cd05096 PTKc_DDR1 Catalytic do 99.5 8.6E-14 1.9E-18 148.5 14.8 186 306-543 11-234 (304)
38 KOG0597 Serine-threonine prote 99.5 3.9E-14 8.4E-19 158.5 12.4 179 306-542 8-193 (808)
39 cd05627 STKc_NDR2 Catalytic do 99.5 2.2E-14 4.8E-19 157.5 10.1 189 306-543 7-230 (360)
40 cd05593 STKc_PKB_gamma Catalyt 99.5 9.1E-14 2E-18 151.1 14.4 185 307-544 2-190 (328)
41 cd05626 STKc_LATS2 Catalytic d 99.5 4.6E-14 9.9E-19 156.5 12.2 190 306-544 7-243 (381)
42 cd05590 STKc_nPKC_eta Catalyti 99.5 1.3E-13 2.9E-18 149.1 15.4 184 307-543 2-190 (320)
43 cd05571 STKc_PKB Catalytic dom 99.5 7.6E-14 1.6E-18 151.1 13.3 184 307-543 2-189 (323)
44 cd05591 STKc_nPKC_epsilon Cata 99.5 1.4E-13 3.1E-18 148.7 15.3 185 307-543 2-190 (321)
45 cd05604 STKc_SGK3 Catalytic do 99.5 7.7E-14 1.7E-18 151.0 13.2 185 307-543 2-190 (325)
46 cd05602 STKc_SGK1 Catalytic do 99.5 7.8E-14 1.7E-18 150.9 13.2 185 307-543 2-190 (325)
47 KOG0193 Serine/threonine prote 99.5 2.4E-14 5.3E-19 161.7 9.4 195 295-544 386-588 (678)
48 PF01163 RIO1: RIO1 family; I 99.5 2.1E-13 4.5E-18 138.2 15.3 176 316-526 2-182 (188)
49 cd05612 STKc_PRKX_like Catalyt 99.5 1.5E-13 3.2E-18 146.3 15.0 181 306-544 7-193 (291)
50 cd05592 STKc_nPKC_theta_delta 99.5 1.6E-13 3.5E-18 148.2 15.1 185 307-543 2-190 (316)
51 KOG0578 p21-activated serine/t 99.5 1.2E-13 2.6E-18 155.4 14.3 188 296-544 271-464 (550)
52 cd05616 STKc_cPKC_beta Catalyt 99.5 1.8E-13 3.8E-18 148.1 15.2 187 306-544 6-196 (323)
53 cd05575 STKc_SGK Catalytic dom 99.5 1E-13 2.3E-18 149.8 13.3 184 307-543 2-190 (323)
54 cd05615 STKc_cPKC_alpha Cataly 99.5 1.9E-13 4.1E-18 148.1 15.2 187 306-544 6-196 (323)
55 cd05631 STKc_GRK4 Catalytic do 99.5 2.5E-13 5.4E-18 144.0 15.6 184 306-543 6-195 (285)
56 cd05102 PTKc_VEGFR3 Catalytic 99.5 1.8E-13 3.8E-18 148.5 14.7 86 452-543 185-270 (338)
57 KOG0600 Cdc2-related protein k 99.5 4.1E-14 8.8E-19 157.2 9.5 192 298-543 117-314 (560)
58 cd05598 STKc_LATS Catalytic do 99.5 7.4E-14 1.6E-18 154.1 11.6 191 306-543 7-238 (376)
59 cd05595 STKc_PKB_beta Catalyti 99.5 1.5E-13 3.2E-18 149.0 13.4 185 307-544 2-190 (323)
60 KOG0591 NIMA (never in mitosis 99.5 4.2E-14 9.1E-19 147.6 8.6 184 306-543 25-222 (375)
61 cd05608 STKc_GRK1 Catalytic do 99.5 3.8E-13 8.3E-18 142.2 16.2 185 308-544 1-192 (280)
62 cd05594 STKc_PKB_alpha Catalyt 99.5 1.1E-13 2.5E-18 149.6 12.3 184 307-543 2-190 (325)
63 cd05603 STKc_SGK2 Catalytic do 99.5 1.2E-13 2.5E-18 149.1 12.0 183 307-543 2-190 (321)
64 KOG0577 Serine/threonine prote 99.5 2.7E-14 5.9E-19 160.0 7.2 188 292-538 20-214 (948)
65 cd05585 STKc_YPK1_like Catalyt 99.5 2.5E-13 5.4E-18 146.2 14.5 184 308-544 1-188 (312)
66 cd05620 STKc_nPKC_delta Cataly 99.5 2.8E-13 6.1E-18 146.3 14.9 184 307-544 2-191 (316)
67 cd05573 STKc_ROCK_NDR_like Cat 99.5 8E-14 1.7E-18 151.5 10.6 191 306-543 7-224 (350)
68 cd06657 STKc_PAK4 Catalytic do 99.5 2.1E-13 4.7E-18 145.5 13.7 180 306-543 26-210 (292)
69 cd05624 STKc_MRCK_beta Catalyt 99.5 1.9E-13 4.2E-18 148.5 13.4 188 306-544 7-203 (331)
70 PTZ00426 cAMP-dependent protei 99.5 3.9E-13 8.4E-18 147.3 15.7 189 300-544 29-223 (340)
71 KOG0574 STE20-like serine/thre 99.5 1.8E-14 3.8E-19 151.1 4.6 194 283-538 18-218 (502)
72 cd05618 STKc_aPKC_iota Catalyt 99.5 2.8E-13 6.2E-18 147.2 14.2 187 306-544 1-191 (329)
73 cd05588 STKc_aPKC Catalytic do 99.5 3.7E-13 8E-18 146.2 15.0 183 307-544 2-191 (329)
74 cd07878 STKc_p38beta_MAPK11 Ca 99.5 1.6E-13 3.5E-18 149.2 12.2 198 289-544 3-211 (343)
75 cd05587 STKc_cPKC Catalytic do 99.5 3.8E-13 8.1E-18 145.6 14.7 185 306-544 6-196 (324)
76 cd05597 STKc_DMPK_like Catalyt 99.5 3.9E-13 8.5E-18 146.2 14.9 185 306-543 7-202 (331)
77 KOG1187 Serine/threonine prote 99.5 1.5E-13 3.2E-18 152.5 11.7 186 301-543 75-272 (361)
78 cd05617 STKc_aPKC_zeta Catalyt 99.5 3.7E-13 8E-18 146.1 14.6 184 307-544 2-191 (327)
79 cd05614 STKc_MSK2_N N-terminal 99.5 3.5E-13 7.6E-18 146.0 14.2 189 306-544 6-202 (332)
80 KOG0659 Cdk activating kinase 99.5 2.7E-13 5.8E-18 140.9 12.4 184 305-543 7-196 (318)
81 cd05589 STKc_PKN Catalytic dom 99.5 2.4E-13 5.1E-18 147.1 12.7 187 306-543 5-195 (324)
82 cd05584 STKc_p70S6K Catalytic 99.5 3.4E-13 7.4E-18 146.0 13.9 185 306-543 2-194 (323)
83 PLN00034 mitogen-activated pro 99.5 3E-13 6.4E-18 148.2 13.1 187 300-543 73-267 (353)
84 PRK09188 serine/threonine prot 99.5 4.9E-13 1.1E-17 148.3 14.8 139 305-496 23-165 (365)
85 cd05625 STKc_LATS1 Catalytic d 99.5 2.4E-13 5.2E-18 150.6 12.3 190 306-544 7-243 (382)
86 cd05629 STKc_NDR_like_fungal C 99.5 3.4E-13 7.4E-18 149.1 13.4 189 306-543 7-242 (377)
87 KOG0585 Ca2+/calmodulin-depend 99.5 1.1E-12 2.5E-17 144.8 17.2 202 306-543 103-313 (576)
88 cd06649 PKc_MEK2 Catalytic dom 99.5 5.7E-13 1.2E-17 144.7 14.8 180 306-543 11-196 (331)
89 cd05601 STKc_CRIK Catalytic do 99.5 1.2E-13 2.6E-18 149.5 9.4 185 306-543 7-203 (330)
90 cd05621 STKc_ROCK2 Catalytic d 99.5 3.2E-13 6.9E-18 149.8 12.7 185 306-543 49-241 (370)
91 cd05122 PKc_STE Catalytic doma 99.5 1.1E-12 2.3E-17 133.5 15.1 180 306-543 6-191 (253)
92 KOG0032 Ca2+/calmodulin-depend 99.5 3.2E-13 7E-18 150.7 12.2 189 306-546 41-235 (382)
93 cd05622 STKc_ROCK1 Catalytic d 99.5 5.7E-13 1.2E-17 147.7 14.0 184 306-544 49-242 (371)
94 cd07862 STKc_CDK6 Catalytic do 99.5 8.2E-13 1.8E-17 139.5 14.6 184 306-543 7-203 (290)
95 cd05623 STKc_MRCK_alpha Cataly 99.4 6.7E-13 1.5E-17 144.2 14.0 185 306-543 7-202 (332)
96 cd06642 STKc_STK25-YSK1 Cataly 99.4 1.1E-12 2.3E-17 137.8 14.3 182 306-543 10-195 (277)
97 cd00192 PTKc Catalytic domain 99.4 1.6E-12 3.5E-17 133.4 15.0 186 306-543 1-201 (262)
98 cd05596 STKc_ROCK Catalytic do 99.4 6.8E-13 1.5E-17 146.9 12.9 190 302-544 44-242 (370)
99 cd05104 PTKc_Kit Catalytic dom 99.4 1.4E-12 3E-17 144.8 15.2 86 452-543 225-310 (375)
100 KOG0660 Mitogen-activated prot 99.4 1.8E-13 3.9E-18 147.3 7.8 192 305-544 27-223 (359)
101 cd05607 STKc_GRK7 Catalytic do 99.4 2.1E-12 4.6E-17 136.3 15.8 184 308-544 1-189 (277)
102 cd07848 STKc_CDKL5 Catalytic d 99.4 6E-13 1.3E-17 140.3 11.5 185 306-543 7-195 (287)
103 cd05082 PTKc_Csk Catalytic dom 99.4 1.9E-12 4.1E-17 134.2 14.9 179 306-543 12-193 (256)
104 PTZ00267 NIMA-related protein 99.4 9.2E-13 2E-17 151.1 13.6 185 305-544 72-266 (478)
105 cd05064 PTKc_EphR_A10 Catalyti 99.4 1.5E-12 3.3E-17 136.2 14.1 184 306-543 11-202 (266)
106 KOG0663 Protein kinase PITSLRE 99.4 2.9E-13 6.4E-18 144.1 8.7 187 306-544 82-273 (419)
107 cd07869 STKc_PFTAIRE1 Catalyti 99.4 7E-13 1.5E-17 141.6 11.8 184 305-543 10-198 (303)
108 cd06605 PKc_MAPKK Catalytic do 99.4 2.4E-12 5.1E-17 133.6 15.3 181 306-543 7-193 (265)
109 cd07871 STKc_PCTAIRE3 Catalyti 99.4 1E-12 2.2E-17 139.5 12.8 182 305-543 10-198 (288)
110 cd06917 STKc_NAK1_like Catalyt 99.4 2E-12 4.3E-17 135.4 14.8 186 306-544 7-197 (277)
111 cd08529 STKc_FA2-like Catalyti 99.4 5.1E-12 1.1E-16 130.2 17.4 185 306-543 6-195 (256)
112 cd07874 STKc_JNK3 Catalytic do 99.4 7.5E-13 1.6E-17 144.9 11.9 195 293-544 9-213 (355)
113 cd06635 STKc_TAO1 Catalytic do 99.4 6.4E-12 1.4E-16 135.4 18.6 198 287-544 14-219 (317)
114 cd05605 STKc_GRK4_like Catalyt 99.4 3E-12 6.4E-17 135.8 15.7 185 306-544 6-196 (285)
115 cd06650 PKc_MEK1 Catalytic dom 99.4 2.3E-12 4.9E-17 140.4 15.2 180 306-543 11-196 (333)
116 cd05586 STKc_Sck1_like Catalyt 99.4 6.9E-13 1.5E-17 143.7 11.0 122 413-543 67-191 (330)
117 cd05619 STKc_nPKC_theta Cataly 99.4 1.8E-12 3.8E-17 140.3 14.0 185 307-543 2-190 (316)
118 cd05570 STKc_PKC Catalytic dom 99.4 2.7E-12 5.9E-17 138.7 15.4 183 307-543 2-190 (318)
119 cd06640 STKc_MST4 Catalytic do 99.4 2.4E-12 5.1E-17 135.4 14.6 180 306-543 10-195 (277)
120 PTZ00283 serine/threonine prot 99.4 8.2E-13 1.8E-17 152.4 12.1 122 417-544 114-240 (496)
121 cd05582 STKc_RSK_N N-terminal 99.4 8.6E-13 1.9E-17 142.2 11.5 184 306-543 2-192 (318)
122 KOG0608 Warts/lats-like serine 99.4 1.1E-12 2.4E-17 148.1 12.5 189 305-543 634-865 (1034)
123 KOG0201 Serine/threonine prote 99.4 2.8E-13 6.1E-18 148.6 7.3 190 294-542 9-204 (467)
124 cd05632 STKc_GRK5 Catalytic do 99.4 3.5E-12 7.5E-17 135.2 15.5 185 306-543 6-195 (285)
125 cd06629 STKc_MAPKKK_Bck1_like 99.4 4.2E-12 9.2E-17 132.6 15.9 198 300-543 1-206 (272)
126 cd05033 PTKc_EphR Catalytic do 99.4 3.4E-12 7.3E-17 133.1 15.1 185 306-543 10-202 (266)
127 KOG1163 Casein kinase (serine/ 99.4 1.2E-12 2.6E-17 134.3 11.3 136 306-493 21-164 (341)
128 PF00069 Pkinase: Protein kina 99.4 6.9E-13 1.5E-17 136.7 9.7 185 306-544 5-194 (260)
129 KOG0582 Ste20-like serine/thre 99.4 1.5E-12 3.3E-17 143.1 12.7 186 306-541 32-224 (516)
130 cd05048 PTKc_Ror Catalytic Dom 99.4 3E-12 6.5E-17 134.5 14.5 186 306-543 11-220 (283)
131 cd05063 PTKc_EphR_A2 Catalytic 99.4 2.6E-12 5.6E-17 133.9 13.5 188 305-543 10-204 (268)
132 cd05068 PTKc_Frk_like Catalyti 99.4 3.1E-12 6.8E-17 133.0 13.9 183 306-543 12-198 (261)
133 KOG0667 Dual-specificity tyros 99.4 9.9E-13 2.1E-17 150.3 11.0 186 305-544 191-383 (586)
134 cd00180 PKc Catalytic domain o 99.4 6.5E-12 1.4E-16 122.7 15.3 180 308-542 1-187 (215)
135 cd06625 STKc_MEKK3_like Cataly 99.4 3E-12 6.5E-17 132.6 13.6 191 305-544 7-202 (263)
136 cd05151 ChoK Choline Kinase (C 99.4 3.8E-12 8.1E-17 124.1 13.5 132 305-495 3-139 (170)
137 PRK13184 pknD serine/threonine 99.4 2.8E-12 6E-17 155.3 15.0 192 306-544 8-226 (932)
138 cd05040 PTKc_Ack_like Catalyti 99.4 4.2E-12 9.2E-17 131.3 14.4 186 306-543 1-194 (257)
139 cd07875 STKc_JNK1 Catalytic do 99.4 2.1E-12 4.6E-17 141.9 12.8 189 299-544 22-220 (364)
140 cd05115 PTKc_Zap-70 Catalytic 99.4 4.2E-12 9.1E-17 132.4 14.3 185 307-543 2-192 (257)
141 cd06628 STKc_MAPKKK_Byr2_like 99.4 4.4E-12 9.5E-17 131.9 14.3 195 306-543 6-206 (267)
142 cd05112 PTKc_Itk Catalytic dom 99.4 5.9E-12 1.3E-16 130.1 15.2 183 306-543 10-195 (256)
143 cd05041 PTKc_Fes_like Catalyti 99.4 4.7E-12 1E-16 130.5 14.4 187 306-544 1-190 (251)
144 smart00219 TyrKc Tyrosine kina 99.4 5.5E-12 1.2E-16 129.6 14.8 183 306-543 5-198 (258)
145 cd06627 STKc_Cdc7_like Catalyt 99.4 6.7E-12 1.5E-16 128.7 15.4 184 306-543 6-193 (254)
146 cd05114 PTKc_Tec_Rlk Catalytic 99.4 5E-12 1.1E-16 131.1 14.5 183 306-543 10-195 (256)
147 cd06641 STKc_MST3 Catalytic do 99.4 6.1E-12 1.3E-16 132.3 15.4 188 297-543 3-195 (277)
148 cd06656 STKc_PAK3 Catalytic do 99.4 3.3E-12 7.2E-17 136.4 13.5 181 306-543 25-209 (297)
149 cd05609 STKc_MAST Catalytic do 99.4 2.5E-12 5.3E-17 137.6 12.5 189 306-543 7-210 (305)
150 cd07859 STKc_TDY_MAPK_plant Ca 99.4 2E-12 4.3E-17 139.5 11.9 187 306-544 6-203 (338)
151 KOG0594 Protein kinase PCTAIRE 99.4 2.9E-12 6.2E-17 138.0 12.9 185 306-543 17-215 (323)
152 cd05633 STKc_GRK3 Catalytic do 99.4 7.4E-12 1.6E-16 132.5 15.9 183 307-543 1-190 (279)
153 cd07872 STKc_PCTAIRE2 Catalyti 99.4 2.4E-12 5.2E-17 137.9 12.3 183 305-543 11-199 (309)
154 cd05090 PTKc_Ror1 Catalytic do 99.4 5.1E-12 1.1E-16 133.1 14.3 184 306-543 11-220 (283)
155 cd05580 STKc_PKA Catalytic dom 99.4 8.1E-12 1.7E-16 132.5 15.9 181 306-543 7-192 (290)
156 cd06612 STKc_MST1_2 Catalytic 99.4 6.7E-12 1.5E-16 129.3 14.8 180 306-543 9-193 (256)
157 cd05103 PTKc_VEGFR2 Catalytic 99.4 5.6E-12 1.2E-16 137.8 15.0 85 453-543 191-275 (343)
158 cd06631 STKc_YSK4 Catalytic do 99.4 6.3E-12 1.4E-16 130.8 14.4 192 306-543 6-202 (265)
159 cd05070 PTKc_Fyn_Yrk Catalytic 99.4 1.2E-11 2.5E-16 128.6 16.4 183 306-544 12-198 (260)
160 cd05039 PTKc_Csk_like Catalyti 99.4 8E-12 1.7E-16 129.3 15.1 178 306-543 12-193 (256)
161 cd05146 RIO3_euk RIO kinase fa 99.4 1.1E-11 2.5E-16 126.3 15.8 179 306-520 3-194 (197)
162 KOG0612 Rho-associated, coiled 99.4 7.2E-13 1.6E-17 157.9 8.0 122 415-543 148-275 (1317)
163 cd05630 STKc_GRK6 Catalytic do 99.4 8.6E-12 1.9E-16 132.4 15.4 185 306-543 6-195 (285)
164 cd05079 PTKc_Jak1_rpt2 Catalyt 99.4 5E-12 1.1E-16 133.5 13.5 189 306-544 10-207 (284)
165 cd05109 PTKc_HER2 Catalytic do 99.4 8.1E-12 1.8E-16 131.3 15.1 185 306-543 13-205 (279)
166 cd05049 PTKc_Trk Catalytic dom 99.4 4.2E-12 9.1E-17 133.0 12.8 186 306-543 11-218 (280)
167 cd06619 PKc_MKK5 Catalytic dom 99.4 6.9E-12 1.5E-16 132.2 14.5 179 306-543 7-187 (279)
168 cd05034 PTKc_Src_like Catalyti 99.4 1.4E-11 3E-16 127.7 16.5 181 306-543 12-198 (261)
169 cd07876 STKc_JNK2 Catalytic do 99.4 5.3E-12 1.1E-16 138.6 13.7 187 301-544 21-217 (359)
170 cd05108 PTKc_EGFR Catalytic do 99.4 6.8E-12 1.5E-16 135.0 14.3 185 305-543 12-205 (316)
171 cd07863 STKc_CDK4 Catalytic do 99.4 5.4E-12 1.2E-16 132.9 13.1 186 306-543 6-201 (288)
172 cd05037 PTK_Jak_rpt1 Pseudokin 99.4 6.3E-12 1.4E-16 129.7 13.2 117 415-543 73-200 (259)
173 cd06623 PKc_MAPKK_plant_like C 99.4 9.8E-12 2.1E-16 128.4 14.7 182 306-544 7-195 (264)
174 cd06646 STKc_MAP4K5 Catalytic 99.4 1.1E-11 2.4E-16 129.1 15.2 181 306-543 15-203 (267)
175 KOG0198 MEKK and related serin 99.4 3E-12 6.4E-17 138.9 11.1 182 306-540 23-213 (313)
176 cd06654 STKc_PAK1 Catalytic do 99.3 7E-12 1.5E-16 133.8 13.7 182 306-544 26-211 (296)
177 cd05072 PTKc_Lyn Catalytic dom 99.3 7E-12 1.5E-16 130.1 13.3 183 306-543 12-198 (261)
178 cd08223 STKc_Nek4 Catalytic do 99.3 1.3E-11 2.8E-16 127.4 15.2 186 306-543 6-196 (257)
179 cd05059 PTKc_Tec_like Catalyti 99.3 9.9E-12 2.2E-16 129.0 14.4 181 306-543 10-195 (256)
180 cd05054 PTKc_VEGFR Catalytic d 99.3 1.2E-11 2.5E-16 135.3 15.6 86 452-543 184-269 (337)
181 cd08224 STKc_Nek6_Nek7 Catalyt 99.3 1.3E-11 2.8E-16 127.9 15.1 187 306-544 8-201 (267)
182 cd05606 STKc_beta_ARK Catalyti 99.3 1.1E-11 2.3E-16 131.0 14.7 183 307-543 1-190 (278)
183 cd05071 PTKc_Src Catalytic dom 99.3 1.1E-11 2.5E-16 129.3 14.7 181 306-543 12-197 (262)
184 cd05097 PTKc_DDR_like Catalyti 99.3 8.7E-12 1.9E-16 132.5 14.0 185 306-544 11-226 (295)
185 cd05083 PTKc_Chk Catalytic dom 99.3 8.9E-12 1.9E-16 129.0 13.7 177 306-543 12-191 (254)
186 cd05581 STKc_PDK1 Catalytic do 99.3 4.5E-12 9.7E-17 132.1 11.4 190 306-543 7-216 (280)
187 cd06637 STKc_TNIK Catalytic do 99.3 7.6E-12 1.6E-16 130.5 13.1 192 296-544 4-211 (272)
188 cd05105 PTKc_PDGFR_alpha Catal 99.3 1E-11 2.2E-16 139.7 14.9 86 452-543 248-333 (400)
189 PRK09605 bifunctional UGMP fam 99.3 9.8E-12 2.1E-16 144.7 15.3 143 304-495 337-479 (535)
190 PHA03212 serine/threonine kina 99.3 5.3E-12 1.2E-16 141.3 12.5 176 306-544 98-278 (391)
191 cd05088 PTKc_Tie2 Catalytic do 99.3 1.9E-11 4.1E-16 130.9 16.1 182 306-543 13-217 (303)
192 cd06658 STKc_PAK5 Catalytic do 99.3 5E-12 1.1E-16 134.8 11.5 180 306-543 28-212 (292)
193 cd06632 STKc_MEKK1_plant Catal 99.3 1.4E-11 3.1E-16 126.7 14.5 187 305-543 5-196 (258)
194 cd06645 STKc_MAP4K3 Catalytic 99.3 1.4E-11 3E-16 128.4 14.4 181 306-543 15-203 (267)
195 cd07880 STKc_p38gamma_MAPK12 C 99.3 6.6E-12 1.4E-16 137.2 12.5 198 288-543 2-210 (343)
196 cd08228 STKc_Nek6 Catalytic do 99.3 2.8E-11 6E-16 125.9 16.6 186 306-543 8-200 (267)
197 cd05611 STKc_Rim15_like Cataly 99.3 2.1E-11 4.6E-16 126.4 15.7 180 306-543 2-187 (260)
198 cd05062 PTKc_IGF-1R Catalytic 99.3 1.7E-11 3.6E-16 128.8 15.0 186 306-543 12-215 (277)
199 cd06611 STKc_SLK_like Catalyti 99.3 2.1E-11 4.6E-16 128.1 15.7 182 306-543 11-202 (280)
200 PHA02988 hypothetical protein; 99.3 2.5E-11 5.4E-16 129.2 16.4 183 304-544 24-217 (283)
201 cd06644 STKc_STK10_LOK Catalyt 99.3 1E-11 2.2E-16 131.6 13.4 181 306-543 18-209 (292)
202 PTZ00284 protein kinase; Provi 99.3 6.3E-12 1.4E-16 143.5 12.5 187 306-544 135-340 (467)
203 cd05067 PTKc_Lck_Blk Catalytic 99.3 1.7E-11 3.7E-16 127.3 14.7 181 306-543 12-197 (260)
204 KOG0197 Tyrosine kinases [Sign 99.3 3.5E-12 7.7E-17 143.0 10.0 184 306-544 212-399 (468)
205 cd05057 PTKc_EGFR_like Catalyt 99.3 1.6E-11 3.5E-16 129.0 14.6 185 306-543 13-205 (279)
206 cd06659 STKc_PAK6 Catalytic do 99.3 1.7E-11 3.8E-16 131.0 15.0 180 306-543 27-211 (297)
207 cd05069 PTKc_Yes Catalytic dom 99.3 1.5E-11 3.2E-16 128.1 14.0 182 306-543 12-197 (260)
208 cd05061 PTKc_InsR Catalytic do 99.3 2E-11 4.4E-16 129.2 15.4 186 306-543 12-215 (288)
209 cd05113 PTKc_Btk_Bmx Catalytic 99.3 1.4E-11 3.1E-16 128.2 13.9 181 306-543 10-195 (256)
210 cd05106 PTKc_CSF-1R Catalytic 99.3 1.3E-11 2.8E-16 137.1 14.3 86 452-543 223-308 (374)
211 PHA03211 serine/threonine kina 99.3 6.5E-12 1.4E-16 143.7 12.2 178 306-543 175-356 (461)
212 cd08219 STKc_Nek3 Catalytic do 99.3 1.7E-11 3.7E-16 126.8 14.2 184 306-543 6-194 (255)
213 cd08229 STKc_Nek7 Catalytic do 99.3 1.5E-11 3.2E-16 128.0 13.8 184 306-543 8-200 (267)
214 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.3 1.8E-11 3.8E-16 129.1 14.6 184 306-544 10-205 (283)
215 cd05035 PTKc_Axl_like Catalyti 99.3 2.5E-11 5.5E-16 126.2 15.5 121 417-543 82-209 (273)
216 cd06624 STKc_ASK Catalytic dom 99.3 2.1E-11 4.6E-16 127.2 15.0 184 306-543 14-205 (268)
217 cd05578 STKc_Yank1 Catalytic d 99.3 1.7E-11 3.6E-16 127.1 14.0 182 306-543 6-193 (258)
218 cd05065 PTKc_EphR_B Catalytic 99.3 1.3E-11 2.8E-16 129.0 13.1 188 306-543 10-205 (269)
219 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.3 2.2E-11 4.7E-16 127.4 14.9 183 307-543 2-203 (269)
220 cd05075 PTKc_Axl Catalytic dom 99.3 1.4E-11 2.9E-16 128.6 13.2 185 306-543 5-208 (272)
221 cd05101 PTKc_FGFR2 Catalytic d 99.3 1.9E-11 4.2E-16 130.4 14.7 187 305-543 20-233 (304)
222 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.3 1.4E-11 2.9E-16 130.1 13.3 119 414-542 88-214 (274)
223 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.3 9.6E-12 2.1E-16 130.9 12.0 185 306-544 10-206 (284)
224 cd06615 PKc_MEK Catalytic doma 99.3 2.6E-11 5.7E-16 130.1 15.6 182 306-544 7-193 (308)
225 cd05066 PTKc_EphR_A Catalytic 99.3 1.4E-11 3E-16 128.7 13.1 187 306-543 10-203 (267)
226 KOG0588 Serine/threonine prote 99.3 9.7E-12 2.1E-16 142.0 12.7 183 306-543 18-206 (786)
227 cd06643 STKc_SLK Catalytic dom 99.3 2.9E-11 6.2E-16 127.4 15.5 182 306-543 11-202 (282)
228 cd05579 STKc_MAST_like Catalyt 99.3 2.8E-11 6E-16 124.7 15.1 126 415-543 66-195 (265)
229 PF07714 Pkinase_Tyr: Protein 99.3 4.8E-12 1.1E-16 132.4 9.5 186 306-543 5-199 (259)
230 PHA03209 serine/threonine kina 99.3 9.5E-12 2.1E-16 137.0 12.0 177 305-544 71-251 (357)
231 cd06613 STKc_MAP4K3_like Catal 99.3 2.8E-11 6E-16 125.1 14.8 182 306-543 9-198 (262)
232 cd07873 STKc_PCTAIRE1 Catalyti 99.3 1E-11 2.2E-16 132.4 11.8 183 305-543 11-199 (301)
233 cd06606 STKc_MAPKKK Catalytic 99.3 3.2E-11 7E-16 123.1 15.1 187 306-544 6-198 (260)
234 cd05120 APH_ChoK_like Aminogly 99.3 2.5E-11 5.5E-16 113.5 13.1 134 306-496 4-142 (155)
235 cd05052 PTKc_Abl Catalytic dom 99.3 2.3E-11 5E-16 126.8 14.1 183 306-543 12-199 (263)
236 KOG0580 Serine/threonine prote 99.3 2.9E-12 6.3E-17 131.6 7.1 188 301-544 22-217 (281)
237 cd07853 STKc_NLK Catalytic dom 99.3 9.7E-12 2.1E-16 137.3 11.9 186 306-544 6-200 (372)
238 cd06655 STKc_PAK2 Catalytic do 99.3 1.8E-11 3.8E-16 130.9 13.5 182 306-544 25-210 (296)
239 cd08215 STKc_Nek Catalytic dom 99.3 3.1E-11 6.6E-16 123.6 14.6 185 306-543 6-197 (258)
240 cd07847 STKc_CDKL1_4 Catalytic 99.3 2.4E-11 5.1E-16 127.5 14.0 183 306-543 7-195 (286)
241 PF06176 WaaY: Lipopolysacchar 99.3 3.4E-11 7.3E-16 124.2 14.7 100 384-493 82-184 (229)
242 cd05091 PTKc_Ror2 Catalytic do 99.3 3.6E-11 7.7E-16 126.5 15.4 185 306-543 11-220 (283)
243 cd05073 PTKc_Hck Catalytic dom 99.3 3.2E-11 7E-16 125.5 14.9 182 306-543 12-197 (260)
244 cd05095 PTKc_DDR2 Catalytic do 99.3 2.5E-11 5.3E-16 129.1 14.3 185 306-544 11-227 (296)
245 cd05042 PTKc_Aatyk Catalytic d 99.3 3.7E-11 8.1E-16 125.4 15.4 183 307-543 2-203 (269)
246 cd07850 STKc_JNK Catalytic dom 99.3 1.5E-11 3.3E-16 134.6 13.0 188 299-543 14-211 (353)
247 PRK12274 serine/threonine prot 99.3 2.2E-11 4.8E-16 125.2 13.2 158 306-522 8-166 (218)
248 cd06609 STKc_MST3_like Catalyt 99.3 2.6E-11 5.6E-16 127.0 14.1 182 306-543 7-192 (274)
249 KOG0610 Putative serine/threon 99.3 1.9E-11 4.2E-16 133.5 13.4 146 300-493 76-229 (459)
250 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 1.6E-11 3.6E-16 128.4 12.5 186 306-544 10-207 (284)
251 cd05077 PTK_Jak1_rpt1 Pseudoki 99.3 3E-11 6.5E-16 126.5 14.5 118 414-543 76-203 (262)
252 PHA03207 serine/threonine kina 99.3 8.7E-12 1.9E-16 139.1 11.0 178 306-544 98-282 (392)
253 cd05574 STKc_phototropin_like 99.3 2.1E-11 4.6E-16 130.7 13.6 190 306-543 7-226 (316)
254 cd06620 PKc_MAPKK_Byr1_like Ca 99.3 2.6E-11 5.6E-16 128.0 13.9 181 306-543 11-196 (284)
255 cd05036 PTKc_ALK_LTK Catalytic 99.3 3.8E-11 8.3E-16 126.3 15.2 186 306-543 12-215 (277)
256 cd07832 STKc_CCRK Catalytic do 99.3 1.6E-11 3.5E-16 128.8 12.2 184 306-543 6-195 (286)
257 cd05098 PTKc_FGFR1 Catalytic d 99.3 3.2E-11 7E-16 129.0 14.8 187 305-543 23-236 (307)
258 cd05047 PTKc_Tie Catalytic dom 99.3 5.1E-11 1.1E-15 124.8 15.9 182 306-543 1-205 (270)
259 cd06614 STKc_PAK Catalytic dom 99.3 5.1E-11 1.1E-15 125.8 16.0 182 306-544 25-211 (286)
260 cd06648 STKc_PAK_II Catalytic 99.3 4.2E-11 9.1E-16 127.0 15.1 183 305-544 24-210 (285)
261 cd06621 PKc_MAPKK_Pek1_like Ca 99.3 5.6E-11 1.2E-15 125.8 16.1 183 306-544 7-198 (287)
262 cd05089 PTKc_Tie1 Catalytic do 99.3 3.8E-11 8.3E-16 127.9 14.7 183 306-543 8-212 (297)
263 cd08221 STKc_Nek9 Catalytic do 99.3 6.1E-11 1.3E-15 122.5 15.9 184 306-543 6-195 (256)
264 cd05572 STKc_cGK_PKG Catalytic 99.3 5E-11 1.1E-15 123.8 15.2 181 308-543 1-186 (262)
265 PLN03225 Serine/threonine-prot 99.3 2.1E-11 4.6E-16 142.9 13.8 124 414-543 207-373 (566)
266 cd05044 PTKc_c-ros Catalytic d 99.3 2.6E-11 5.7E-16 126.2 13.1 185 307-543 2-207 (269)
267 cd06622 PKc_MAPKK_PBS2_like Ca 99.3 2.5E-11 5.3E-16 127.9 12.9 182 306-543 7-201 (286)
268 cd06617 PKc_MKK3_6 Catalytic d 99.3 3.8E-11 8.3E-16 125.9 14.3 182 306-543 7-201 (283)
269 cd05060 PTKc_Syk_like Catalyti 99.3 5.9E-11 1.3E-15 123.1 15.5 181 307-543 2-192 (257)
270 cd06630 STKc_MEKK1 Catalytic d 99.3 4E-11 8.6E-16 124.6 14.2 194 306-544 6-203 (268)
271 cd05577 STKc_GRK Catalytic dom 99.3 3.1E-11 6.7E-16 127.0 13.5 182 308-543 1-188 (277)
272 cd06610 STKc_OSR1_SPAK Catalyt 99.3 5.4E-11 1.2E-15 123.1 15.0 187 306-544 7-202 (267)
273 cd05583 STKc_MSK_N N-terminal 99.3 4.9E-11 1.1E-15 126.0 14.9 188 306-543 6-202 (288)
274 cd05613 STKc_MSK1_N N-terminal 99.3 3.8E-11 8.3E-16 126.9 14.1 188 306-543 6-202 (290)
275 cd05051 PTKc_DDR Catalytic dom 99.3 5.3E-11 1.2E-15 125.8 15.2 124 414-543 91-226 (296)
276 cd06636 STKc_MAP4K4_6 Catalyti 99.3 2.2E-11 4.8E-16 128.0 12.1 182 306-544 22-221 (282)
277 cd05111 PTK_HER3 Pseudokinase 99.3 4.5E-11 9.8E-16 126.2 14.5 123 415-543 81-205 (279)
278 PTZ00036 glycogen synthase kin 99.3 1.9E-11 4E-16 139.0 12.4 119 417-544 142-266 (440)
279 cd08220 STKc_Nek8 Catalytic do 99.3 3.5E-11 7.6E-16 123.9 13.1 185 306-543 6-195 (256)
280 cd07844 STKc_PCTAIRE_like Cata 99.3 2.2E-11 4.7E-16 128.7 11.7 184 306-544 11-199 (291)
281 cd06639 STKc_myosinIIIB Cataly 99.3 6.3E-11 1.4E-15 125.3 15.2 183 306-543 28-227 (291)
282 KOG4721 Serine/threonine prote 99.3 1.5E-11 3.3E-16 137.9 10.8 172 306-544 130-306 (904)
283 cd05032 PTKc_InsR_like Catalyt 99.3 6E-11 1.3E-15 124.1 14.8 184 306-543 12-215 (277)
284 cd06638 STKc_myosinIIIA Cataly 99.3 4.1E-11 9E-16 126.1 13.6 181 306-543 24-223 (286)
285 cd05116 PTKc_Syk Catalytic dom 99.3 5.1E-11 1.1E-15 123.8 14.1 185 307-543 2-192 (257)
286 COG1718 RIO1 Serine/threonine 99.3 2.2E-10 4.9E-15 119.5 18.5 184 307-526 55-242 (268)
287 cd05148 PTKc_Srm_Brk Catalytic 99.3 4.4E-11 9.6E-16 123.9 13.4 183 306-543 12-198 (261)
288 PHA03390 pk1 serine/threonine- 99.3 8.3E-11 1.8E-15 123.7 15.6 118 414-544 81-201 (267)
289 cd05058 PTKc_Met_Ron Catalytic 99.3 5.9E-11 1.3E-15 123.1 14.2 126 414-543 69-196 (262)
290 cd06607 STKc_TAO Catalytic dom 99.3 6.9E-11 1.5E-15 126.5 15.2 180 306-543 21-208 (307)
291 cd05055 PTKc_PDGFR Catalytic d 99.3 4.7E-11 1E-15 127.9 13.9 187 305-543 40-237 (302)
292 cd07868 STKc_CDK8 Catalytic do 99.3 4.8E-11 1E-15 128.0 13.9 189 304-544 5-211 (317)
293 cd07861 STKc_CDK1_euk Catalyti 99.3 3.5E-11 7.5E-16 126.4 12.2 183 306-543 6-196 (285)
294 cd06652 STKc_MEKK2 Catalytic d 99.3 6.6E-11 1.4E-15 123.3 14.2 188 306-543 8-203 (265)
295 KOG0658 Glycogen synthase kina 99.3 9.4E-12 2E-16 134.3 7.8 181 304-543 28-220 (364)
296 cd05107 PTKc_PDGFR_beta Cataly 99.2 7.3E-11 1.6E-15 132.8 15.3 86 452-543 250-335 (401)
297 cd06608 STKc_myosinIII_like Ca 99.2 9E-11 2E-15 121.8 14.9 181 306-543 12-212 (275)
298 COG3642 Mn2+-dependent serine/ 99.2 1.4E-10 3.1E-15 116.1 15.5 139 306-492 2-140 (204)
299 cd07839 STKc_CDK5 Catalytic do 99.2 2.2E-11 4.8E-16 128.0 10.4 184 306-544 6-195 (284)
300 cd06633 STKc_TAO3 Catalytic do 99.2 1.6E-10 3.4E-15 124.6 17.1 193 292-543 15-214 (313)
301 cd07841 STKc_CDK7 Catalytic do 99.2 3.7E-11 8E-16 127.4 12.1 188 306-544 6-198 (298)
302 cd05050 PTKc_Musk Catalytic do 99.2 9E-11 1.9E-15 124.0 14.9 186 306-543 11-226 (288)
303 cd05110 PTKc_HER4 Catalytic do 99.2 5.2E-11 1.1E-15 127.4 13.2 184 306-543 13-205 (303)
304 cd06653 STKc_MEKK3_like_1 Cata 99.2 6.7E-11 1.4E-15 123.4 13.7 190 306-543 8-203 (264)
305 cd05099 PTKc_FGFR4 Catalytic d 99.2 1.2E-10 2.5E-15 125.3 15.9 186 305-543 17-230 (314)
306 cd06626 STKc_MEKK4 Catalytic d 99.2 6.4E-11 1.4E-15 122.5 13.3 188 306-543 6-200 (264)
307 KOG1095 Protein tyrosine kinas 99.2 3E-11 6.5E-16 146.1 12.3 186 306-544 698-899 (1025)
308 cd08217 STKc_Nek2 Catalytic do 99.2 6.2E-11 1.3E-15 122.1 13.1 183 306-543 6-204 (265)
309 cd07879 STKc_p38delta_MAPK13 C 99.2 4.6E-11 9.9E-16 130.4 12.7 195 290-543 4-209 (342)
310 cd06647 STKc_PAK_I Catalytic d 99.2 6.2E-11 1.3E-15 126.3 13.4 181 306-543 25-209 (293)
311 cd08227 PK_STRAD_alpha Pseudok 99.2 7.5E-11 1.6E-15 127.7 14.3 191 307-544 5-205 (327)
312 cd07877 STKc_p38alpha_MAPK14 C 99.2 4.5E-11 9.8E-16 130.8 12.6 194 292-543 8-212 (345)
313 cd05610 STKc_MASTL Catalytic d 99.2 4.6E-11 1E-15 142.7 13.6 144 305-495 9-156 (669)
314 cd07836 STKc_Pho85 Catalytic d 99.2 6.9E-11 1.5E-15 124.1 13.4 181 306-543 6-195 (284)
315 cd06634 STKc_TAO2 Catalytic do 99.2 2.2E-10 4.8E-15 123.0 17.5 193 292-543 9-208 (308)
316 cd07870 STKc_PFTAIRE2 Catalyti 99.2 3.8E-11 8.3E-16 127.0 11.4 184 305-543 10-198 (291)
317 cd05094 PTKc_TrkC Catalytic do 99.2 6.5E-11 1.4E-15 125.6 13.2 185 306-543 11-219 (291)
318 cd08218 STKc_Nek1 Catalytic do 99.2 2.3E-10 5E-15 118.3 16.8 183 306-543 6-195 (256)
319 PHA02882 putative serine/threo 99.2 4.2E-11 9E-16 127.9 11.7 138 402-543 81-227 (294)
320 cd05123 STKc_AGC Catalytic dom 99.2 1.1E-10 2.3E-15 119.9 14.2 181 308-543 1-187 (250)
321 KOG1989 ARK protein kinase fam 99.2 5.1E-11 1.1E-15 140.1 13.2 195 306-542 43-251 (738)
322 cd05053 PTKc_FGFR Catalytic do 99.2 8.5E-11 1.9E-15 124.3 13.8 186 306-543 18-228 (293)
323 cd07837 STKc_CdkB_plant Cataly 99.2 7.8E-11 1.7E-15 124.5 13.5 186 306-543 7-206 (295)
324 cd07867 STKc_CDC2L6 Catalytic 99.2 7E-11 1.5E-15 126.4 13.2 189 304-544 5-211 (317)
325 KOG0611 Predicted serine/threo 99.2 2.8E-11 6.1E-16 131.4 9.8 183 306-543 59-247 (668)
326 cd05045 PTKc_RET Catalytic dom 99.2 1.2E-10 2.7E-15 123.2 14.7 185 306-543 6-223 (290)
327 cd07833 STKc_CDKL Catalytic do 99.2 5.2E-11 1.1E-15 125.0 11.6 185 306-543 7-196 (288)
328 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.2 4.8E-11 1E-15 124.2 11.1 120 414-543 71-199 (258)
329 cd07846 STKc_CDKL2_3 Catalytic 99.2 6.1E-11 1.3E-15 124.6 11.8 184 306-543 7-195 (286)
330 cd06651 STKc_MEKK3 Catalytic d 99.2 1.5E-10 3.2E-15 121.0 14.6 191 305-543 7-203 (266)
331 cd05056 PTKc_FAK Catalytic dom 99.2 1.6E-10 3.5E-15 120.8 14.9 184 306-543 12-202 (270)
332 cd07843 STKc_CDC2L1 Catalytic 99.2 9.1E-11 2E-15 124.2 13.1 182 306-543 11-201 (293)
333 cd07851 STKc_p38 Catalytic dom 99.2 8.7E-11 1.9E-15 128.3 13.3 199 291-544 5-211 (343)
334 KOG0589 Serine/threonine prote 99.2 2.4E-11 5.3E-16 135.6 8.9 185 306-543 10-200 (426)
335 cd08530 STKc_CNK2-like Catalyt 99.2 1.7E-10 3.6E-15 118.7 14.4 182 306-543 6-195 (256)
336 cd07840 STKc_CDK9_like Catalyt 99.2 6.3E-11 1.4E-15 123.9 11.4 186 306-543 5-196 (287)
337 smart00221 STYKc Protein kinas 99.2 2.4E-10 5.1E-15 114.6 14.8 185 306-543 5-194 (225)
338 PRK10345 hypothetical protein; 99.2 1.3E-10 2.9E-15 119.7 13.3 142 305-493 7-159 (210)
339 cd07864 STKc_CDK12 Catalytic d 99.2 8.8E-11 1.9E-15 124.5 12.3 185 306-543 13-212 (302)
340 smart00220 S_TKc Serine/Threon 99.2 1.2E-10 2.6E-15 117.3 12.7 176 312-543 1-180 (244)
341 cd05093 PTKc_TrkB Catalytic do 99.2 1.7E-10 3.8E-15 122.1 14.4 186 305-543 10-216 (288)
342 cd07831 STKc_MOK Catalytic dom 99.2 1.9E-10 4.2E-15 120.3 14.0 182 306-543 5-193 (282)
343 cd07845 STKc_CDK10 Catalytic d 99.2 1.2E-10 2.6E-15 124.6 12.7 186 306-544 13-204 (309)
344 PRK01723 3-deoxy-D-manno-octul 99.2 4.1E-10 8.8E-15 118.3 16.3 149 306-495 37-194 (239)
345 cd05092 PTKc_TrkA Catalytic do 99.2 1.5E-10 3.3E-15 122.1 12.9 185 306-543 11-218 (280)
346 PLN00009 cyclin-dependent kina 99.2 2.2E-10 4.8E-15 121.4 14.2 186 306-544 8-199 (294)
347 PTZ00266 NIMA-related protein 99.2 1.7E-10 3.7E-15 140.7 14.9 193 301-544 13-238 (1021)
348 cd08528 STKc_Nek10 Catalytic d 99.2 1.9E-10 4.1E-15 120.0 12.9 193 306-543 6-207 (269)
349 cd05118 STKc_CMGC Catalytic do 99.2 2.6E-10 5.6E-15 119.3 13.9 185 306-544 5-194 (283)
350 cd07865 STKc_CDK9 Catalytic do 99.2 1.5E-10 3.3E-15 122.8 12.3 190 305-543 17-218 (310)
351 cd08225 STKc_Nek5 Catalytic do 99.2 2.2E-10 4.9E-15 118.0 13.2 186 305-543 5-196 (257)
352 cd07860 STKc_CDK2_3 Catalytic 99.2 6.7E-11 1.5E-15 124.3 9.4 184 306-544 6-196 (284)
353 cd05100 PTKc_FGFR3 Catalytic d 99.2 3.3E-10 7.2E-15 123.0 14.8 186 306-543 18-230 (334)
354 KOG0194 Protein tyrosine kinas 99.2 8.4E-11 1.8E-15 133.4 10.0 184 306-542 163-355 (474)
355 cd06618 PKc_MKK7 Catalytic dom 99.2 3.4E-10 7.5E-15 120.4 13.9 188 301-543 15-212 (296)
356 cd07838 STKc_CDK4_6_like Catal 99.1 5.9E-10 1.3E-14 116.8 15.1 186 306-543 5-200 (287)
357 PHA03210 serine/threonine kina 99.1 1.6E-10 3.4E-15 133.7 11.7 147 383-544 209-363 (501)
358 cd06616 PKc_MKK4 Catalytic dom 99.1 4.4E-10 9.6E-15 118.5 14.2 181 306-543 10-204 (288)
359 cd07866 STKc_BUR1 Catalytic do 99.1 1.3E-10 2.7E-15 123.5 10.1 192 306-544 14-222 (311)
360 cd05043 PTK_Ryk Pseudokinase d 99.1 4E-10 8.7E-15 118.4 13.8 186 306-543 12-213 (280)
361 cd05046 PTK_CCK4 Pseudokinase 99.1 3.1E-10 6.8E-15 118.7 12.8 183 306-543 11-212 (275)
362 cd05074 PTKc_Tyro3 Catalytic d 99.1 4.6E-10 1E-14 117.1 13.5 185 306-543 5-209 (273)
363 cd07830 STKc_MAK_like Catalyti 99.1 3.5E-10 7.6E-15 118.6 12.6 183 306-544 5-194 (283)
364 cd07829 STKc_CDK_like Catalyti 99.1 4.8E-10 1E-14 117.2 13.3 184 306-544 5-194 (282)
365 PLN03224 probable serine/threo 99.1 3.9E-10 8.5E-15 130.3 13.6 78 415-494 258-360 (507)
366 cd07835 STKc_CDK1_like Catalyt 99.1 2.2E-10 4.8E-15 120.3 10.5 185 306-544 5-195 (283)
367 cd07849 STKc_ERK1_2_like Catal 99.1 1.8E-10 4E-15 125.1 9.9 186 306-544 11-205 (336)
368 KOG0696 Serine/threonine prote 99.1 5E-11 1.1E-15 129.7 5.4 189 302-543 350-544 (683)
369 KOG0196 Tyrosine kinase, EPH ( 99.1 8.3E-11 1.8E-15 136.2 7.4 212 272-537 603-822 (996)
370 cd05576 STKc_RPK118_like Catal 99.1 4.5E-10 9.7E-15 115.9 11.6 118 415-544 58-177 (237)
371 KOG3653 Transforming growth fa 99.1 3E-10 6.4E-15 126.0 10.7 178 306-537 216-404 (534)
372 cd07857 STKc_MPK1 Catalytic do 99.1 3.4E-10 7.4E-15 122.8 10.9 186 306-543 6-204 (332)
373 KOG0587 Traf2- and Nck-interac 99.1 5.5E-10 1.2E-14 131.2 12.9 144 306-498 25-178 (953)
374 cd08226 PK_STRAD_beta Pseudoki 99.1 8.5E-10 1.8E-14 119.5 13.7 187 310-544 10-205 (328)
375 KOG4645 MAPKKK (MAP kinase kin 99.1 3.9E-11 8.5E-16 145.0 2.9 184 306-540 1241-1432(1509)
376 KOG1094 Discoidin domain recep 99.1 2.7E-10 5.8E-15 128.6 9.1 186 306-544 544-734 (807)
377 KOG0199 ACK and related non-re 99.1 1.4E-10 3E-15 132.9 6.7 187 306-544 116-310 (1039)
378 cd07856 STKc_Sty1_Hog1 Catalyt 99.1 5.4E-10 1.2E-14 121.5 11.3 182 305-544 15-201 (328)
379 cd07834 STKc_MAPK Catalytic do 99.1 3.4E-10 7.4E-15 122.1 9.6 184 306-543 6-201 (330)
380 cd08222 STKc_Nek11 Catalytic d 99.1 8.1E-10 1.8E-14 114.6 12.0 121 414-543 74-199 (260)
381 cd08216 PK_STRAD Pseudokinase 99.1 1.5E-09 3.3E-14 116.1 14.4 188 308-543 10-204 (314)
382 cd07858 STKc_TEY_MAPK_plant Ca 99.1 6.5E-10 1.4E-14 121.0 11.7 184 305-543 10-203 (337)
383 cd05086 PTKc_Aatyk2 Catalytic 99.1 2.2E-09 4.8E-14 112.5 14.4 76 415-492 68-148 (268)
384 cd07854 STKc_MAPK4_6 Catalytic 99.1 7.5E-10 1.6E-14 120.9 11.3 120 416-543 90-213 (342)
385 KOG4717 Serine/threonine prote 99.0 1E-09 2.2E-14 122.2 12.1 186 305-543 23-213 (864)
386 cd07852 STKc_MAPK15 Catalytic 99.0 9E-10 2E-14 119.6 11.7 189 306-544 13-208 (337)
387 KOG0690 Serine/threonine prote 99.0 4.8E-10 1E-14 119.3 9.1 192 300-544 167-363 (516)
388 KOG1164 Casein kinase (serine/ 99.0 1.3E-09 2.9E-14 118.9 12.8 141 305-491 23-175 (322)
389 cd07855 STKc_ERK5 Catalytic do 99.0 1E-09 2.2E-14 119.3 11.3 187 306-543 11-206 (334)
390 KOG0586 Serine/threonine prote 99.0 7.7E-10 1.7E-14 126.1 10.0 182 306-544 62-250 (596)
391 cd07842 STKc_CDK8_like Catalyt 99.0 1.4E-09 3E-14 115.9 11.4 192 306-544 6-211 (316)
392 KOG0664 Nemo-like MAPK-related 99.0 2.7E-10 5.8E-15 118.8 5.2 89 450-544 165-253 (449)
393 KOG0695 Serine/threonine prote 99.0 3.3E-10 7.2E-15 120.7 6.0 246 296-620 245-495 (593)
394 KOG0662 Cyclin-dependent kinas 99.0 3.9E-10 8.4E-15 111.7 5.9 141 306-497 8-155 (292)
395 KOG1165 Casein kinase (serine/ 99.0 1.7E-09 3.7E-14 115.8 10.8 143 306-499 34-186 (449)
396 PTZ00024 cyclin-dependent prot 99.0 1.9E-09 4.2E-14 116.8 11.2 151 306-494 15-170 (335)
397 COG0478 RIO-like serine/threon 99.0 7E-09 1.5E-13 109.5 14.8 180 306-525 97-277 (304)
398 KOG0668 Casein kinase II, alph 99.0 3.8E-10 8.3E-15 115.4 4.8 227 306-609 44-274 (338)
399 KOG0603 Ribosomal protein S6 k 99.0 1.4E-09 3E-14 124.6 9.4 178 306-545 328-509 (612)
400 PLN00113 leucine-rich repeat r 99.0 3.7E-09 8E-14 131.1 13.9 171 305-544 695-873 (968)
401 KOG0607 MAP kinase-interacting 99.0 3.8E-09 8.3E-14 112.5 11.8 188 305-547 83-289 (463)
402 KOG1035 eIF-2alpha kinase GCN2 99.0 5.8E-10 1.3E-14 134.5 6.1 129 417-548 671-817 (1351)
403 KOG1166 Mitotic checkpoint ser 98.9 1.7E-09 3.7E-14 131.1 9.7 139 306-492 704-850 (974)
404 KOG1167 Serine/threonine prote 98.9 1.9E-09 4.1E-14 118.4 8.9 162 259-495 14-185 (418)
405 KOG0599 Phosphorylase kinase g 98.9 2.8E-09 6.1E-14 111.4 9.3 197 298-544 14-223 (411)
406 KOG3087 Serine/threonine prote 98.9 2.2E-08 4.7E-13 100.4 14.7 148 304-491 11-164 (229)
407 KOG0983 Mitogen-activated prot 98.9 2.7E-09 5.8E-14 111.7 7.9 78 415-496 164-245 (391)
408 PRK15123 lipopolysaccharide co 98.9 4.1E-08 8.9E-13 105.0 16.2 104 383-492 74-194 (268)
409 cd05154 ACAD10_11_like Acyl-Co 98.9 1.5E-08 3.2E-13 102.6 11.9 147 304-496 2-210 (223)
410 KOG2052 Activin A type IB rece 98.9 9.3E-09 2E-13 113.6 10.5 168 306-524 217-395 (513)
411 KOG1006 Mitogen-activated prot 98.9 1.7E-09 3.6E-14 112.9 4.5 140 306-496 70-221 (361)
412 KOG1027 Serine/threonine prote 98.8 6.2E-09 1.3E-13 122.0 9.0 186 304-543 513-708 (903)
413 KOG0984 Mitogen-activated prot 98.8 1.1E-08 2.4E-13 103.7 9.4 173 306-538 52-241 (282)
414 KOG0986 G protein-coupled rece 98.8 1.3E-08 2.9E-13 112.5 10.6 186 306-545 191-382 (591)
415 KOG0670 U4/U6-associated splic 98.8 1.6E-08 3.4E-13 113.4 9.3 178 307-542 439-628 (752)
416 KOG0596 Dual specificity; seri 98.8 3.1E-08 6.7E-13 111.9 11.2 183 306-543 367-566 (677)
417 KOG4279 Serine/threonine prote 98.7 3.5E-08 7.5E-13 113.4 10.8 175 306-536 581-765 (1226)
418 KOG0614 cGMP-dependent protein 98.7 7.1E-09 1.5E-13 115.8 4.5 145 377-543 466-613 (732)
419 KOG0579 Ste20-like serine/thre 98.7 1.5E-08 3.2E-13 115.3 6.8 81 413-495 100-182 (1187)
420 KOG1026 Nerve growth factor re 98.7 1.4E-08 3E-13 119.7 6.6 185 306-543 492-699 (774)
421 KOG1025 Epidermal growth facto 98.7 5.1E-08 1.1E-12 114.0 9.3 185 305-543 701-894 (1177)
422 KOG0604 MAP kinase-activated p 98.7 1.1E-08 2.3E-13 108.5 3.2 186 304-547 66-261 (400)
423 KOG0033 Ca2+/calmodulin-depend 98.7 5.7E-09 1.2E-13 107.9 0.9 187 306-545 17-208 (355)
424 KOG1151 Tousled-like protein k 98.6 8.4E-08 1.8E-12 105.7 9.4 191 306-541 469-676 (775)
425 PF06293 Kdo: Lipopolysacchari 98.6 2.1E-07 4.6E-12 95.5 11.8 107 383-495 57-173 (206)
426 KOG0576 Mitogen-activated prot 98.6 1.3E-08 2.9E-13 116.7 3.0 173 306-536 21-202 (829)
427 KOG2345 Serine/threonine prote 98.6 1.9E-07 4.2E-12 97.0 10.2 128 414-543 95-235 (302)
428 PF01636 APH: Phosphotransfera 98.6 1.1E-06 2.5E-11 88.9 14.9 140 306-495 3-200 (239)
429 KOG0666 Cyclin C-dependent kin 98.6 5.7E-08 1.2E-12 103.5 5.3 192 296-543 20-234 (438)
430 KOG1345 Serine/threonine kinas 98.5 1.9E-07 4.2E-12 98.0 7.4 121 414-539 94-215 (378)
431 KOG0669 Cyclin T-dependent kin 98.5 1.9E-08 4.2E-13 104.3 -0.3 186 306-540 23-220 (376)
432 KOG1152 Signal transduction se 98.5 2.9E-07 6.4E-12 104.5 9.0 181 305-537 566-757 (772)
433 KOG0584 Serine/threonine prote 98.5 2E-07 4.3E-12 107.0 7.5 194 293-544 34-238 (632)
434 COG0515 SPS1 Serine/threonine 98.5 1.3E-06 2.9E-11 89.3 12.7 183 306-536 6-198 (384)
435 PRK10593 hypothetical protein; 98.5 7E-06 1.5E-10 89.1 18.7 93 283-429 3-100 (297)
436 KOG0665 Jun-N-terminal kinase 98.5 8.3E-08 1.8E-12 102.7 3.5 128 404-544 83-212 (369)
437 cd05150 APH Aminoglycoside 3'- 98.4 1E-05 2.2E-10 84.4 18.1 164 307-525 5-226 (244)
438 KOG4257 Focal adhesion tyrosin 98.4 9.7E-07 2.1E-11 101.0 11.0 143 306-497 395-545 (974)
439 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1.7E-06 3.7E-11 90.3 11.5 137 305-495 6-185 (226)
440 KOG0200 Fibroblast/platelet-de 98.3 4.3E-06 9.3E-11 99.3 13.5 181 307-543 303-515 (609)
441 PRK05231 homoserine kinase; Pr 98.3 1.3E-05 2.9E-10 87.0 15.2 50 277-332 5-54 (319)
442 KOG2270 Serine/threonine prote 98.3 1.1E-05 2.3E-10 88.7 14.1 188 306-527 150-341 (520)
443 PRK09550 mtnK methylthioribose 98.2 5.8E-05 1.3E-09 85.2 19.1 110 278-428 6-117 (401)
444 cd05155 APH_ChoK_like_1 Unchar 98.2 4.4E-05 9.6E-10 79.5 16.1 36 459-496 163-198 (235)
445 COG2112 Predicted Ser/Thr prot 98.2 2.2E-05 4.8E-10 78.8 12.3 125 306-491 28-154 (201)
446 TIGR02721 ycfN_thiK thiamine k 98.2 7.3E-05 1.6E-09 78.8 17.1 138 306-496 2-179 (256)
447 KOG4278 Protein tyrosine kinas 98.2 2.8E-06 6E-11 97.1 6.6 179 306-539 273-456 (1157)
448 PLN00181 protein SPA1-RELATED; 98.1 2.1E-06 4.6E-11 104.9 4.5 128 416-544 54-210 (793)
449 PRK12396 5-methylribose kinase 98.0 8E-05 1.7E-09 83.7 15.1 193 275-512 6-278 (409)
450 PLN02756 S-methyl-5-thioribose 98.0 0.00018 3.9E-09 81.3 17.7 109 275-426 5-119 (418)
451 KOG0671 LAMMER dual specificit 98.0 2.5E-05 5.5E-10 85.6 10.5 177 306-539 95-299 (415)
452 cd05153 HomoserineK_II Homoser 98.0 6.1E-05 1.3E-09 80.8 12.0 34 459-494 174-207 (296)
453 PRK09902 hypothetical protein; 97.9 0.00024 5.2E-09 73.6 14.8 150 301-493 19-180 (216)
454 PF03881 Fructosamin_kin: Fruc 97.8 0.00011 2.3E-09 79.7 11.2 94 281-427 2-97 (288)
455 PRK06148 hypothetical protein; 97.8 0.00052 1.1E-08 86.2 18.7 55 272-334 4-59 (1013)
456 cd05157 ETNK_euk Ethanolamine 97.8 0.00027 5.9E-09 73.1 12.8 35 460-495 170-204 (235)
457 PF14531 Kinase-like: Kinase-l 97.7 0.00015 3.3E-09 78.4 10.5 42 454-497 158-199 (288)
458 KOG2268 Serine/threonine prote 97.7 5E-05 1.1E-09 82.5 6.5 162 306-501 98-260 (465)
459 TIGR00938 thrB_alt homoserine 97.7 0.0004 8.8E-09 75.3 13.1 34 459-494 186-219 (307)
460 PLN02876 acyl-CoA dehydrogenas 97.7 0.00044 9.6E-09 85.2 14.7 106 279-430 18-132 (822)
461 PRK06149 hypothetical protein; 97.6 0.00065 1.4E-08 85.1 14.9 59 269-335 7-65 (972)
462 KOG1290 Serine/threonine prote 97.5 0.00058 1.3E-08 77.2 10.8 138 295-476 70-223 (590)
463 TIGR01767 MTRK 5-methylthiorib 97.4 0.0014 3.1E-08 73.0 13.3 82 308-428 3-86 (370)
464 cd05156 ChoK_euk Choline Kinas 97.3 0.0012 2.6E-08 71.2 10.4 36 460-496 179-217 (302)
465 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.012 2.6E-07 63.4 16.0 35 460-496 185-220 (276)
466 COG2334 Putative homoserine ki 97.1 0.0047 1E-07 68.3 11.9 29 462-492 199-228 (331)
467 PLN02236 choline kinase 97.0 0.0088 1.9E-07 66.4 14.1 159 284-495 19-234 (344)
468 PF10707 YrbL-PhoP_reg: PhoP r 96.9 0.018 3.8E-07 59.4 13.8 150 305-486 6-165 (199)
469 COG3173 Predicted aminoglycosi 96.8 0.0048 1E-07 67.8 9.3 35 460-496 198-232 (321)
470 PRK11768 serine/threonine prot 96.8 0.01 2.2E-07 65.3 11.9 31 459-493 195-225 (325)
471 smart00750 KIND kinase non-cat 96.7 0.0051 1.1E-07 60.1 7.5 96 428-544 2-99 (176)
472 KOG0603 Ribosomal protein S6 k 96.5 0.0033 7.3E-08 73.2 5.5 124 401-539 56-181 (612)
473 KOG1240 Protein kinase contain 96.4 0.00072 1.6E-08 82.6 -0.2 40 450-491 129-168 (1431)
474 COG3001 Uncharacterized protei 96.4 0.046 1E-06 57.5 12.8 96 281-430 2-99 (286)
475 PLN02421 phosphotransferase, a 96.4 0.025 5.4E-07 62.4 11.7 34 462-496 184-217 (330)
476 KOG4158 BRPK/PTEN-induced prot 96.4 0.005 1.1E-07 68.5 5.9 73 416-492 317-394 (598)
477 KOG0590 Checkpoint kinase and 96.3 0.0042 9.2E-08 73.9 5.3 70 421-494 400-471 (601)
478 KOG1033 eIF-2alpha kinase PEK/ 96.2 0.0016 3.5E-08 74.4 0.7 123 417-546 331-459 (516)
479 KOG2269 Serine/threonine prote 96.2 0.046 9.9E-07 60.0 11.5 135 365-526 322-459 (531)
480 KOG0606 Microtubule-associated 94.8 0.02 4.3E-07 70.4 3.4 91 452-544 154-253 (1205)
481 PRK10271 thiK thiamine kinase; 94.7 0.024 5.2E-07 57.9 3.2 33 461-496 78-110 (188)
482 PF13095 FTA2: Kinetochore Sim 94.7 0.26 5.6E-06 51.1 10.7 142 306-490 43-206 (207)
483 PF04655 APH_6_hur: Aminoglyco 94.6 0.083 1.8E-06 56.4 7.2 30 306-335 8-38 (253)
484 COG5072 ALK1 Serine/threonine 93.8 0.15 3.2E-06 57.0 7.1 81 402-492 285-370 (488)
485 PTZ00384 choline kinase; Provi 92.1 1.8 3.9E-05 49.1 12.9 33 460-495 227-259 (383)
486 KOG1024 Receptor-like protein 91.7 0.29 6.3E-06 54.9 5.8 123 414-542 360-491 (563)
487 TIGR02906 spore_CotS spore coa 91.7 0.12 2.6E-06 55.7 2.8 32 459-493 186-217 (313)
488 PTZ00296 choline kinase; Provi 91.4 2.5 5.3E-05 48.9 13.3 32 461-495 285-316 (442)
489 PF07914 DUF1679: Protein of u 91.3 5.2 0.00011 45.9 15.7 34 462-495 270-306 (414)
490 PF12260 PIP49_C: Protein-kina 90.8 0.64 1.4E-05 47.4 6.9 84 405-495 21-114 (188)
491 smart00587 CHK ZnF_C4 abd HLH 90.3 0.2 4.3E-06 51.1 2.8 38 459-496 119-159 (196)
492 PF02958 EcKinase: Ecdysteroid 88.8 0.67 1.4E-05 49.7 5.6 36 461-496 216-254 (294)
493 KOG0590 Checkpoint kinase and 88.7 0.073 1.6E-06 63.6 -2.0 118 413-535 92-216 (601)
494 PF01633 Choline_kinase: Choli 87.5 0.26 5.7E-06 50.4 1.4 35 460-495 143-177 (211)
495 COG0510 ycfN Thiamine kinase a 84.2 0.76 1.7E-05 49.5 2.9 33 461-495 154-186 (269)
496 TIGR02904 spore_ysxE spore coa 83.9 1 2.3E-05 48.9 3.9 34 459-494 195-228 (309)
497 COG4857 Predicted kinase [Gene 80.1 1.8 4E-05 47.0 3.8 51 459-512 227-279 (408)
498 KOG0601 Cyclin-dependent kinas 78.1 1.7 3.8E-05 50.9 3.2 124 409-537 185-315 (524)
499 cd05124 AFK Actin-Fragmin Kina 77.6 26 0.00056 37.2 11.3 75 413-487 88-172 (238)
500 KOG0601 Cyclin-dependent kinas 77.2 1.4 3E-05 51.7 2.1 81 411-493 335-417 (524)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-85 Score=746.66 Aligned_cols=388 Identities=43% Similarity=0.768 Sum_probs=368.7
Q ss_pred HHHHHHHHHHHHHHhhCCeehhhhhHhhcCcCCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCccc
Q 004115 228 RRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEP 307 (773)
Q Consensus 228 ~~~~~a~~lr~~le~LGptfIKlGQ~lStR~DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~P 307 (773)
..+..+++|+.+|++|||||||+||+||||+|++|++|+++|++|||+|||+|+++++++|++++|.+++++|++|+++|
T Consensus 53 ~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~P 132 (517)
T COG0661 53 LREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEP 132 (517)
T ss_pred HhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCc
Confidence 34556899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQ 386 (773)
Q Consensus 308 IgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~ 386 (773)
+||||+||||+|++ +|++|||||||||+++.++.||.+|+.++.+++++.|. ...+++..+++||.+.+..|+||++
T Consensus 133 iAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~--~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 133 IASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPG--GRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred hhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCc--cccCChHHHHHHHHHHHHHHhCHHH
Confidence 99999999999999 69999999999999999999999999999999998874 3458999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCC
Q 004115 387 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHAD 466 (773)
Q Consensus 387 EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaD 466 (773)
||+|+++|++||++++.++||+|||+||+++||||||++|++++|+..++..|.|++.++..++++|++|++++||||||
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaD 290 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004115 467 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 546 (773)
Q Consensus 467 pHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 546 (773)
||||||+|+. +|+++++||||++++++++|..+++++.++.++|++.+++.+.++|.+++..|...+..+++.+++.+
T Consensus 291 pHpGNi~v~~--~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~ 368 (517)
T COG0661 291 PHPGNILVRS--DGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPI 368 (517)
T ss_pred CCccceEEec--CCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhh
Confidence 9999999996 89999999999999999999999999999999999999999999999999999999999888887765
Q ss_pred HHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhhcchhhcccccccCCCC
Q 004115 547 EERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 626 (773)
Q Consensus 547 ~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~ 626 (773)
. +.+++ +.+++.+..+++++++++++++|++++++.|++.++||++++|||++
T Consensus 369 ~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~~~vEg~~~~ldp~~ 421 (517)
T COG0661 369 Y-------------------GKPLE--------EISFGEILDKLFEVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRF 421 (517)
T ss_pred h-------------------CCChh--------hccHHHHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHHHHHhhCccc
Confidence 2 33443 46788999999999999999999999999999999999999999999
Q ss_pred CHHHhHHHHHHHHHHhhhhc
Q 004115 627 DITEIAKPYAMELLKFREAG 646 (773)
Q Consensus 627 ~i~~~a~P~~~~~l~~~~~~ 646 (773)
|++..+.||+.+++..+..+
T Consensus 422 ~~~~~a~p~~~~~~~~~~~~ 441 (517)
T COG0661 422 NLWAVAQPLLAKWLKKQLSP 441 (517)
T ss_pred cHHHHhhHHHHHHHHHhhhH
Confidence 99999999999998866543
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=1.4e-84 Score=743.47 Aligned_cols=416 Identities=31% Similarity=0.547 Sum_probs=379.9
Q ss_pred HHHHHHHHHHHhhCCeehhhhhHhhcCcCCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccc
Q 004115 231 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 310 (773)
Q Consensus 231 ~~a~~lr~~le~LGptfIKlGQ~lStR~DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgs 310 (773)
..|+++|.+|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++++++||.+++++|.+||++|+||
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~Plas 129 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLAS 129 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEee-c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Q 004115 311 ASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEA 388 (773)
Q Consensus 311 aSiGQVhrA~l-~-G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA 388 (773)
||+||||+|++ + |++|||||+||++.+.|..|+++|+.++.+++++.|. ...+++.++++|+.+.+.+|+||.+||
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~--~~~l~~~~~v~e~~~~l~~ElD~~~Ea 207 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPD--GRRLKPREVVAEFEKTLHDELDLMREA 207 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcc--cccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence 99999999999 5 9999999999999999999999999999999998874 345789999999999999999999999
Q ss_pred HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCCC
Q 004115 389 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH 468 (773)
Q Consensus 389 ~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDpH 468 (773)
+|+.+|+++|.+.+.++||+|||+||+++||||||++|++++++..+...+.+++.+++.+++.|+.|+|++||||||||
T Consensus 208 ~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpH 287 (537)
T PRK04750 208 ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMH 287 (537)
T ss_pred HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 99999999999999999999999999999999999999999998777788899999999999999999999999999999
Q ss_pred CCceEEeccCCC----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 469 PGNIAVDDVNGG----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 469 PGNILV~~~~~g----~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
||||++++ +| +++++|||+++.+++++|+.+++++.|+.++|++.+++.+.++|.+.+..|...++.++..+++
T Consensus 288 PGNIlv~~--~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~ 365 (537)
T PRK04750 288 PGNIFVSY--DPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCE 365 (537)
T ss_pred hHHeEEec--CCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 99999985 55 9999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhhcchhhcccccccCC
Q 004115 545 SFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP 624 (773)
Q Consensus 545 ~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP 624 (773)
.|. ..|++ +++++.++.++++++++|++++|++++++.|+++++||++++|||
T Consensus 366 ~~~-------------------~~~l~--------~i~~~~~l~~l~~~~r~~~~~ip~~l~ll~ktl~~lEG~~r~LdP 418 (537)
T PRK04750 366 PIF-------------------DKPLA--------EISFGHVLLRLFNTARRFNVEIQPQLVLLQKTLLNVEGLGRQLDP 418 (537)
T ss_pred HHh-------------------CCCcc--------cccHHHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHhCC
Confidence 763 34554 457889999999999999999999999999999999999999999
Q ss_pred CCCHHHhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 004115 625 RFDITEIAKPYAMELLKFREAGVEVILKDFRNRWDRQTRAFYNLFRQADRVEKLAETIQR 684 (773)
Q Consensus 625 ~~~i~~~a~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 684 (773)
++|+++.++||+.+++.++.. +....+.+.+....+.. .+.++| +.+.++|+.
T Consensus 419 ~~d~~~~a~p~l~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~lP---~~l~~~l~~ 471 (537)
T PRK04750 419 QLDLWKTAKPFLERWMKEQVG-PRALVRALKEEAPFWAE---KLPELP---RLVHDSLRQ 471 (537)
T ss_pred CCCHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHH---HHHHhH---HHHHHHHHh
Confidence 999999999999999987764 44444444444333222 233444 456677764
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=1.1e-77 Score=677.20 Aligned_cols=428 Identities=33% Similarity=0.581 Sum_probs=376.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCCCc-HHHHHHHHHHHHHHHHHHHHhhCCeehhhhhHhhcCcCCCC
Q 004115 185 KTYSTIQRTLEIWGFVLTFVFRAWLNNQKFS-YRGGMT-EEKKVLRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILA 262 (773)
Q Consensus 185 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~a~~lr~~le~LGptfIKlGQ~lStR~DllP 262 (773)
+||++|.+++..+|+. +++..++....+. ...... ...........|++++++|++|||+|||+||+||||+|++|
T Consensus 2 ~R~~~i~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp 79 (437)
T TIGR01982 2 RRLRRIIRVLIRYGFL--ALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLP 79 (437)
T ss_pred HHHHHHHHHHHHhCcH--HHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCC
Confidence 5788888888888863 3333211000000 000000 00001112346899999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEecCCccchHHH
Q 004115 263 QEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDI 341 (773)
Q Consensus 263 ~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~ 341 (773)
++||++|++|||++||+|+++++++++++||.+++++|.+||++|+|+||+||||+|++ +|++||||||||++.+.+..
T Consensus 80 ~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~ 159 (437)
T TIGR01982 80 ADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAA 159 (437)
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEE
Q 004115 342 DLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTM 421 (773)
Q Consensus 342 DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVM 421 (773)
|+++|+.++.++++..|.. ..+++..+++|+...+.+|+||.+||+|+.+|+++|++.+.+++|++|+++|++++|||
T Consensus 160 Dl~~l~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvm 237 (437)
T TIGR01982 160 DIALLYRLARIVERLSPDS--RRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTM 237 (437)
T ss_pred HHHHHHHHHHHHHHhCccc--cccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEE
Confidence 9999999999999887753 34689999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH
Q 004115 422 EYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL 501 (773)
Q Consensus 422 EyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l 501 (773)
||++|.+++++......+.++..++..++..++.|+|.+|+||+|||||||++++ +|+++++|||+++.++++.+..+
T Consensus 238 E~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~--~g~i~liDfG~~~~l~~~~r~~l 315 (437)
T TIGR01982 238 EWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLK--DGKIIALDFGIVGRLSEEDRRYL 315 (437)
T ss_pred EeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECC--CCcEEEEeCCCeeECCHHHHHHH
Confidence 9999999999876655667888999999999999999999999999999999975 89999999999999999999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHH
Q 004115 502 LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQ 581 (773)
Q Consensus 502 ~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~ 581 (773)
.+++.++..+|++.+++.+.++|+..+..|...+..++..+++.|. ..++. +.
T Consensus 316 ~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~-------------------~~~~~--------~~ 368 (437)
T TIGR01982 316 AEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIF-------------------GQPLK--------EI 368 (437)
T ss_pred HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh-------------------CCChh--------hC
Confidence 9999999999999999999999999989999999999988887763 22332 34
Q ss_pred HHHHHHHHHHHHHhhCCccCCceehhhhhcchhhcccccccCCCCCHHHhHHHHHHHHHHhhhh
Q 004115 582 RLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYAMELLKFREA 645 (773)
Q Consensus 582 ~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~~i~~~a~P~~~~~l~~~~~ 645 (773)
++++++.++++++++|++++|++|+++.|+++++||+++.|||+||++++++||+.+++.++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~ 432 (437)
T TIGR01982 369 SVGRLLAGLFKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLG 432 (437)
T ss_pred CHHHHHHHHHHHHHHCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcC
Confidence 6778899999999999999999999999999999999999999999999999999998876553
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-67 Score=592.46 Aligned_cols=383 Identities=42% Similarity=0.645 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHHhhCCeehhhhhHhhcCcCCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCccccc
Q 004115 230 KALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIA 309 (773)
Q Consensus 230 ~~~a~~lr~~le~LGptfIKlGQ~lStR~DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIg 309 (773)
...|++|+++++.|||+|||+||.+|||+|++|+||.++|+.|||++||+|++++.+++++|+|.+++++|.+||++|||
T Consensus 91 ~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~pia 170 (538)
T KOG1235|consen 91 LSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIA 170 (538)
T ss_pred HHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhh
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Q 004115 310 AASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEA 388 (773)
Q Consensus 310 saSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA 388 (773)
+||+||||+|++ +|+.|||||||||+++.+..|+.+++.++.+++++.|. +++..++||+++.+.+|+||.+||
T Consensus 171 aASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~-----~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 171 AASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPD-----FDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred hcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcC-----CchhhHHHHHHhhhHhhcchHHHH
Confidence 999999999999 89999999999999999999999999999999999986 479999999999999999999999
Q ss_pred HHHHHHHHhcCCCC---ccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 004115 389 ANAELFASNFKDMD---YVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 465 (773)
Q Consensus 389 ~Nl~rf~~~f~~~~---~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHa 465 (773)
+|+++|+++|++.+ .|+||+|||++|+++|||||||+|++++|+..++..++++..++..+.++|++|||.+|||||
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHa 325 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHA 325 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccC
Confidence 99999999999998 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEecc--CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 466 DPHPGNIAVDDV--NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 466 DpHPGNILV~~~--~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
|||||||+|++. .+++++++|||+++.++++.|..++++|.++...|...|.+....+|... +.+...+..++.. +
T Consensus 326 DPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~~~~fa~~l~~-~ 403 (538)
T KOG1235|consen 326 DPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDLYPLFATALTG-R 403 (538)
T ss_pred CCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chhhhhhHHHHhC-C
Confidence 999999999852 36789999999999999999999999999999977666777777777654 3333322222211 0
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCCC--CCchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhhcchhhcccccc
Q 004115 544 NSFEERLAAQRKEREITTQELGFKK--PLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKG 621 (773)
Q Consensus 544 ~~~~~~l~~~~~~~~~~~~~~~f~~--~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~ 621 (773)
. +..... .+... ....++... ......+.+..+.+.+. ++|..+.++.|+...+.|+-..
T Consensus 404 ~-~~s~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~----~~p~~i~li~k~~~l~r~~~~~ 465 (538)
T KOG1235|consen 404 P-WDSVIG------------AGITKYLKGLEEDADE-NQKIASAKFPGISQLLR----RMPREILLILKTNDLLRGLSSN 465 (538)
T ss_pred c-hhhccc------------cchhhhhhhhhhhhhh-HHHHHHHHhhHHHHHHH----hchHhhhhhcccHHHHHhHHHH
Confidence 0 000000 00000 000000000 11122233333333333 4599999999999888888777
Q ss_pred cCCCCC----HHHhHHHHHH
Q 004115 622 LDPRFD----ITEIAKPYAM 637 (773)
Q Consensus 622 LdP~~~----i~~~a~P~~~ 637 (773)
+.-..+ +...++..++
T Consensus 466 l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 466 LGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred hccccccchHHHHHHHHHHH
Confidence 755444 4555555544
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-55 Score=473.68 Aligned_cols=378 Identities=24% Similarity=0.378 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHhhCCeehhhhhHhhcCcCCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCC-ChhhhhhccCcccc
Q 004115 230 KALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGA-PLDDVFERFDVEPI 308 (773)
Q Consensus 230 ~~~a~~lr~~le~LGptfIKlGQ~lStR~DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~-~~~eiF~~fd~~PI 308 (773)
.-|.+.|..+||..||||||||||+|||+|++|+++|.+|++|+.+++|+++...++.+..++|. .++++|.+|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 34678899999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cccceeEEEEEeec-----------------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHH
Q 004115 309 AAASLGQVHRARLK-----------------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIY 371 (773)
Q Consensus 309 gsaSiGQVhrA~l~-----------------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~ 371 (773)
|+|||||||+|+++ .+.|||||.||+++++|+.|+.||+..|++.+.+ |. ..-.++...+
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~v-P~--l~wL~l~~~v 274 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNV-PD--LSWLSLPLEV 274 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhc-Cc--cccccCcchH
Confidence 99999999999862 1479999999999999999999999999999854 43 2235678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC-CHHHHHHHHH
Q 004115 372 DECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV-DRKRLGRYAV 450 (773)
Q Consensus 372 ~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~-d~~~la~~li 450 (773)
+.|.-.+..++|.++||.|+.+|..||+....|.+|+++..+.++.+|+.+|.+|.++..+..-..... -.++++..++
T Consensus 275 kqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~ 354 (565)
T KOG1236|consen 275 KQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGV 354 (565)
T ss_pred HHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998754333221 3567888999
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCC-----------------------------------------CcEEEEeecc
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNG-----------------------------------------GRLIFYDFGM 489 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~-----------------------------------------g~I~LlDFGl 489 (773)
+++++|++.++|+|+|+|||||++...++ .+++++|-|+
T Consensus 355 ~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGi 434 (565)
T KOG1236|consen 355 NALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGI 434 (565)
T ss_pred HHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchh
Confidence 99999999999999999999999975333 5799999999
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCC
Q 004115 490 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKP 569 (773)
Q Consensus 490 v~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~ 569 (773)
+..+++..+.++..+|.|+++.|...+.+.+++........|.+.+.+.++.++..... + ..
T Consensus 435 v~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~s------------t------~s 496 (565)
T KOG1236|consen 435 VTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARS------------T------KS 496 (565)
T ss_pred hhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhh------------h------cc
Confidence 99999999999999999999999999999999988777778999988888777665421 0 01
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhhcchhhcccccccCCCCCHHHhHHHHH
Q 004115 570 LSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA 636 (773)
Q Consensus 570 l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~~i~~~a~P~~ 636 (773)
.+..++++++.++++++++|++++.++|+.++-+++++||.+|+|||++|++....+|+
T Consensus 497 --------l~tl~i~~ll~em~tmvreH~V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 497 --------LRTLNIGDLLSEMFTMVREHHVRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred --------cCcCcHHHHHHHHHHHHHHhheeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 12457899999999999999999999999999999999999999999999999444443
No 6
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=100.00 E-value=2e-35 Score=304.83 Aligned_cols=349 Identities=24% Similarity=0.319 Sum_probs=285.8
Q ss_pred hhcCc-CCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEe
Q 004115 254 FSTRV-DILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQ 331 (773)
Q Consensus 254 lStR~-DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVq 331 (773)
||... .++|+...+-++..++.+..||..++.+++..++|.+|.+-|++||..|.+++||||||+|++ +|..||||+|
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 44443 589999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred cCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee
Q 004115 332 RPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW 411 (773)
Q Consensus 332 rP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~ 411 (773)
+||+.+.|+.|+..+..++++-.- .|+. .-+...++-.++.+..|+||.+||..+.+|+..+++++.+++|.|+.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~l-lPkG----LFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~ 156 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGL-LPKG----LFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVD 156 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhccc-cccc----ccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHH
Confidence 999999999999999998887553 3331 23566777788899999999999999999999999999999999999
Q ss_pred ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeeccee
Q 004115 412 EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 412 e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~ 491 (773)
++||.++++||++.|.+|.....+.+ ..+..++..+++.+++.||+..|++.||..+|++++. ...+|.|+|||..+
T Consensus 157 Elct~rvlt~el~~G~pid~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~-~tk~i~LlDFGAsr 233 (363)
T KOG1234|consen 157 ELCTVRVLTLELGQGLPIDKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNG-RTKKIELLDFGASR 233 (363)
T ss_pred hhccchhhhhhhhcCccchhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCC-CcceEEEEeccccc
Confidence 99999999999999999988654332 4578899999999999999999999999999999986 46789999999999
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCc
Q 004115 492 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLS 571 (773)
Q Consensus 492 ~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~ 571 (773)
.++.+.-..|++++.+...+|.+.+.+--.++|+++... ... +.+...+.... ..++-.....++|+.
T Consensus 234 ~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~E--s~~------m~DAHv~sv~i-lgepfa~~~pydF~~--- 301 (363)
T KOG1234|consen 234 EYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYE--SKV------MEDAHVESVMI-LGEPFASDGPYDFGD--- 301 (363)
T ss_pred cccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccch--HHH------HHHHhhhHhhh-ccccccCCCCcCcCc---
Confidence 999999999999999999999999999999999987532 111 11111111000 000000112233432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCccCCc-eehhhhhcchhhcccccccCCCCCHHHh
Q 004115 572 KEEKIEKKKQRLAAIGEDLLAIAADQPFRFPA-TFTFVVRAFSVLDGIGKGLDPRFDITEI 631 (773)
Q Consensus 572 ~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~-~~~ll~Ral~~lEGi~~~LdP~~~i~~~ 631 (773)
..+..-+.++..++.+|++.-|| +-..+.|-+...-=+|..|...+.-.+.
T Consensus 302 ---------q~~t~ri~~lipvmL~hRL~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~l 353 (363)
T KOG1234|consen 302 ---------QTVTDRIQNLIPVMLRHRLCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDL 353 (363)
T ss_pred ---------cHHHHHHHhhhHHHHhccCCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHH
Confidence 23445556777788899998776 6777889888777777777777665443
No 7
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.94 E-value=1.9e-27 Score=223.31 Aligned_cols=118 Identities=49% Similarity=0.820 Sum_probs=112.9
Q ss_pred HHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchH
Q 004115 290 EELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWV 368 (773)
Q Consensus 290 ~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~ 368 (773)
++||.+++++|++||++|+||||+||||+|++ +|++||||||||++++.+..|+.+|+.++++++++.+.. .+++.
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~---~~~~~ 77 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR---RLDLE 77 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc---ccCHH
Confidence 47999999999999999999999999999999 799999999999999999999999999999999887643 57999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceee
Q 004115 369 AIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIF 410 (773)
Q Consensus 369 ~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~ 410 (773)
.+++|+.+.+.+|+||++||+|+++|+++|++.+.++||+||
T Consensus 78 ~~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 78 EIVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 999999999999999999999999999999999999999987
No 8
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=4.4e-19 Score=178.77 Aligned_cols=180 Identities=17% Similarity=0.170 Sum_probs=118.0
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.+||+|++||||+|++ +|+.||||+.+|+.... ..+.+.+.....+... ....++..+..+ .+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---------~~ 66 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR------YSKSNPRKLVFA---------WA 66 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc------cccCCHHHHHHH---------HH
Confidence 5899999999999999 79999999999985432 1111111110000000 001223333222 23
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCH---HHHHHHHHHHHHHHHHh-C
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILS-H 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~---~~la~~li~~~l~qI~~-~ 460 (773)
..|.+|+.++.+ +++.+|.++.. ...+|||||++|..+.... +.....+. ..++..++ ..+.++|. .
T Consensus 67 ~~E~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~-~~l~~lH~~~ 137 (190)
T cd05145 67 EKEFRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVV-EQMRRLYQEA 137 (190)
T ss_pred HHHHHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHH-HHHHHHHHhC
Confidence 578889988865 45778888853 4569999999998554321 22223332 33444444 33677787 9
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 520 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l 520 (773)
|++|+|+||+||+++ +++++|+|||++..++...- .+++.+|++.+...+
T Consensus 138 givHrDlkP~NIll~---~~~~~liDFG~a~~~~~~~~-------~~~~~~~~~~~~~~~ 187 (190)
T cd05145 138 GLVHGDLSEYNILYH---DGKPYIIDVSQAVELDHPNA-------LEFLRRDIRNINRFF 187 (190)
T ss_pred CEecCCCChhhEEEE---CCCEEEEEcccceecCCCCH-------HHHHHHHHHHHHHHh
Confidence 999999999999997 68899999999999987532 345677887776654
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.79 E-value=1.7e-18 Score=187.75 Aligned_cols=184 Identities=18% Similarity=0.185 Sum_probs=133.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||+||||.||+|++ +|..||||-..- ..+..+..+.+..|+-
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~----------------------------------~~l~~k~~e~L~~Ei~ 61 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAK----------------------------------KKLNKKLVELLLSEIK 61 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehh----------------------------------hccCHHHHHHHHHHHH
Confidence 4499999999999999 699999996611 1122344455666766
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH---HHHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR---YAVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~---~li~~~l~qI~~ 459 (773)
+..|.+ +++ |.+-.+.+ ..+..+||||||+|++|+++..... .+++ ..++ ..+.+.++.+|+
T Consensus 62 iLkel~-----------H~nIV~l~d~~~-~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e-~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 62 ILKELK-----------HPNIVRLLDCIE-DDDFIYLVMEYCNGGDLSDYIRRRG-RLPE-ATARHFMQQLASALQFLHE 127 (429)
T ss_pred HHHhcC-----------CcceeeEEEEEe-cCCeEEEEEEeCCCCCHHHHHHHcC-CCCH-HHHHHHHHHHHHHHHHHHH
Confidence 666653 222 33333333 3567799999999999999864331 2222 2222 234455788899
Q ss_pred CCCccCCCCCCceEEecc--CC--CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 460 HGFFHADPHPGNIAVDDV--NG--GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~--~~--g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+++|||+||.|||+... .+ -.+++.|||+++.+.+... .+.+.+.+-+|++++...+-.....|++++
T Consensus 128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~-------a~tlcGSplYMAPEV~~~~~YdAKADLWSi 200 (429)
T KOG0595|consen 128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM-------AETLCGSPLYMAPEVIMSQQYDAKADLWSI 200 (429)
T ss_pred CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH-------HHHhhCCccccCHHHHHhccccchhhHHHH
Confidence 999999999999999852 11 4699999999999986432 344578999999999998888889999999
Q ss_pred HHHHHHHHH
Q 004115 536 RRTAQFFLN 544 (773)
Q Consensus 536 ~~~i~~~l~ 544 (773)
..+++.++.
T Consensus 201 G~Ilyq~l~ 209 (429)
T KOG0595|consen 201 GTILYQCLT 209 (429)
T ss_pred HHHHHHHHh
Confidence 998887764
No 10
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=2.8e-18 Score=173.59 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=116.7
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
..||+|++|+||+|++ +|++||||+.+|+.......| ..+....++-. . ....++..++.++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~~~~~~~~--------- 66 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH-G-----YCKSNPRKMVRTWA--------- 66 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc-c-----ccCCCHHHHHHHHH---------
Confidence 4799999999999999 799999999999864332222 11100011100 0 01234444443332
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH-HhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI-LSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI-~~~G 461 (773)
..|++|+.++.+ +++..|.++. +...+|||||++|..+.... +....++...+...+.+ ..+.++ |..|
T Consensus 67 ~~E~~~l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g 138 (190)
T cd05147 67 EKEMRNLKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCR 138 (190)
T ss_pred HHHHHHHHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468889988865 3455666663 45569999999997665432 22334566655555533 557887 6899
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 520 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l 520 (773)
++|+||||+||+++ +++++|+|||++...+...-. .++.+|...+...+
T Consensus 139 iiHrDlkP~NIli~---~~~v~LiDFG~a~~~~~~~~~-------~~~~~d~~~~~~~f 187 (190)
T cd05147 139 LVHADLSEYNLLYH---DGKLYIIDVSQSVEHDHPHAL-------EFLRMDCVNVNDFF 187 (190)
T ss_pred cccCCCCHHHEEEE---CCcEEEEEccccccCCCcCHH-------HHHHHHHHHHHHHh
Confidence 99999999999997 478999999999866543322 23345655555443
No 11
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.69 E-value=3.7e-16 Score=162.61 Aligned_cols=143 Identities=18% Similarity=0.327 Sum_probs=105.2
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
++++.|.+|+||.+..++..+|||+.+|..... +.+...+...=-|.
T Consensus 37 ~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~---------------------------------~~~~~~f~~g~~~e 83 (232)
T PRK10359 37 KVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT---------------------------------ERFLKSFVKGDYYE 83 (232)
T ss_pred EEecCCCceEEEEEecCCCcEEEEEechhcCch---------------------------------HHHHHhhhhhHHHH
Confidence 789999999999977778899999998875432 00111111122367
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee--------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHH
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFW--------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQI 457 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~--------e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI 457 (773)
+||+++.++.+ +++..|..+. .+++..+|||||++|.+|.++... +. .. ...+...+.++
T Consensus 84 ~Ea~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~~-~~-~~~i~~~l~~l 151 (232)
T PRK10359 84 NLIVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----SE-DV-KAKIKASIESL 151 (232)
T ss_pred HHHHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----cH-HH-HHHHHHHHHHH
Confidence 89999999865 4566665552 235678999999999999887432 11 22 22455679999
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
|.+|++|||||||||++++ +| ++++|||.......+
T Consensus 152 H~~gi~H~Dikp~Nili~~--~g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 152 HQHGMVSGDPHKGNFIVSK--NG-LRIIDLSGKRCTAQR 187 (232)
T ss_pred HHcCCccCCCChHHEEEeC--CC-EEEEECCCcccccch
Confidence 9999999999999999985 67 999999999887543
No 12
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=1e-15 Score=154.77 Aligned_cols=170 Identities=22% Similarity=0.314 Sum_probs=115.3
Q ss_pred cccccccceeEEEEEee-cCeeEEEEEecCCccch--HHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDL--FDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~--i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
.++||+|++|+||+|.. +|+.||||+.+++.... ...+-+ .... ....++ .-..+
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~-------~~~~------~~~~~~---------~~~~~ 77 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRD-------YLGD------RKHASW---------LYLSR 77 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHH-------HHhc------cccchh---------HHHhH
Confidence 37899999999999999 79999999987754211 000000 0000 000001 01123
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG 461 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~G 461 (773)
.++..|...+..+.. ..+.+|.++. ....++||||++|.++.++... .....++..++. .+.++|..|
T Consensus 78 ~~~~~E~~~l~~l~~-----~~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~-~l~~lh~~g 145 (198)
T cd05144 78 LAAQKEFAALKALYE-----EGFPVPKPID--WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILE-EIVKAYKHG 145 (198)
T ss_pred HHHHHHHHHHHHHHH-----cCCCCCceee--cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHH-HHHHHHHCC
Confidence 345667777776654 2356777775 3567999999999998775321 233445554444 357789999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH----HHHHHHHhh
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL----LEAFYGIYE 510 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l----~~l~~al~~ 510 (773)
++|+|+||+||++++ +++++++|||++..++.+.++.+ ...++++++
T Consensus 146 i~H~Dl~p~Nill~~--~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (198)
T cd05144 146 IIHGDLSEFNILVDD--DEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFR 196 (198)
T ss_pred CCcCCCCcccEEEcC--CCcEEEEECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence 999999999999985 88999999999999999888876 555555543
No 13
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=5.1e-16 Score=162.52 Aligned_cols=186 Identities=19% Similarity=0.214 Sum_probs=126.6
Q ss_pred ccccccceeEEEEEe--e-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRAR--L-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~--l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
++||.|++|+||+|+ . +|++||||+.+++..+....+. +... .+.......++...+ +.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~---------~~ 95 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDG-DFRFKYRKINPRKLV---------RL 95 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hccc-chhhccCCCCHHHHH---------HH
Confidence 589999999999999 3 7999999999887543211100 0000 000000011222111 23
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHH---HHHHHHHHHHHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK---RLGRYAVESYLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~---~la~~li~~~l~qI~~ 459 (773)
.+..|++++.++.+. .+.+|+++.. +..+|||||++|..+..... .....+.. .++.. +...+.++|.
T Consensus 96 ~~~~E~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~q-i~~~l~~LH~ 166 (237)
T smart00090 96 WAEKEFRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDD-ILEEMRKLYK 166 (237)
T ss_pred HHHHHHHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCccccccc-ccCCcchHHHHHHHHH-HHHHHHHHHh
Confidence 467889999998642 5778888852 45799999999988765421 11222222 33333 3355888999
Q ss_pred CC-CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004115 460 HG-FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 528 (773)
Q Consensus 460 ~G-ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~ 528 (773)
+| ++|+|+||+||+++ +++++++|||++...+.... .+++.+|.+.+...+.+.|....
T Consensus 167 ~g~iiH~Dikp~NIli~---~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~ 226 (237)
T smart00090 167 EGELVHGDLSEYNILVH---DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVDEL 226 (237)
T ss_pred cCCEEeCCCChhhEEEE---CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCCcC
Confidence 99 99999999999997 57899999999998877654 35578999999999999988543
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.66 E-value=1.4e-15 Score=159.47 Aligned_cols=189 Identities=19% Similarity=0.225 Sum_probs=133.4
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
++|+. ..+|.||||.||..+. +|..+|+|++.- ..+++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k----------------------------------~~vVk----- 84 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDK----------------------------------QKVVK----- 84 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCH----------------------------------HHHHH-----
Confidence 45654 7899999999999999 699999998721 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESYL 454 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li~~~l 454 (773)
+++.-...+|-+-+.... +|. +-+.++ ...+..+|||||++|+.|..+..- ........+....-+-..+
T Consensus 85 lKQveH~~nEk~vL~~v~-----~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAl 157 (355)
T KOG0616|consen 85 LKQVEHTHNEKRVLKAVS-----HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLAL 157 (355)
T ss_pred HHHHHHHhhHHHHHhhcc-----Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHH
Confidence 000111122322222221 111 112221 234567999999999999886532 2233334455555566779
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
+.+|..++++||+||.|||++. +|.|++.|||.+++++..+- .+.+++++++++.+...-....+|-++
T Consensus 158 eylH~~~iiYRDLKPENiLlD~--~G~iKitDFGFAK~v~~rT~---------TlCGTPeYLAPEii~sk~ynkavDWWa 226 (355)
T KOG0616|consen 158 EYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFGFAKRVSGRTW---------TLCGTPEYLAPEIIQSKGYNKAVDWWA 226 (355)
T ss_pred HHHHhcCeeeccCChHHeeecc--CCcEEEEeccceEEecCcEE---------EecCCccccChHHhhcCCCCcchhHHH
Confidence 9999999999999999999986 89999999999999987632 246899999999999876677889999
Q ss_pred HHHHHHHHHHHH
Q 004115 535 VRRTAQFFLNSF 546 (773)
Q Consensus 535 l~~~i~~~l~~~ 546 (773)
|...+++|+..|
T Consensus 227 lGVLIYEMlaG~ 238 (355)
T KOG0616|consen 227 LGVLIYEMLAGY 238 (355)
T ss_pred HHHHHHHHHcCC
Confidence 999998887654
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.65 E-value=2.6e-16 Score=169.41 Aligned_cols=177 Identities=17% Similarity=0.239 Sum_probs=125.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||+|+-|.||++.+ +|+.+|+|+.+-++. .++.+++.+|++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~-----------------------------------~~~~~Qi~rEl~ 129 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID-----------------------------------PALQKQILRELE 129 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC-----------------------------------HHHHHHHHHHHH
Confidence 5799999999999999 699999999843332 345567777877
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCC-CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st-~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~ 459 (773)
..++.. .|+ |.+-..+. ... ...++|||++|++|+++.... ..+....++..... ..|.++|+
T Consensus 130 il~~~~-----------spyIV~~ygaF~-~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~ 196 (364)
T KOG0581|consen 130 ILRSCQ-----------SPYIVGFYGAFY-SNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHE 196 (364)
T ss_pred HHhhCC-----------CCCeeeEeEEEE-eCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 766652 122 11112221 123 478999999999999975321 22343333333222 23677884
Q ss_pred -CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 460 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 -~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
++++|||+||.||||+. .|.++|+|||..+.+... ++.. ..+...+|+++=++-+-..-..|+++|.-.
T Consensus 197 ~~~IIHRDIKPsNlLvNs--kGeVKicDFGVS~~lvnS----~a~t----fvGT~~YMsPERi~g~~Ys~~sDIWSLGLs 266 (364)
T KOG0581|consen 197 ERKIIHRDIKPSNLLVNS--KGEVKICDFGVSGILVNS----IANT----FVGTSAYMSPERISGESYSVKSDIWSLGLS 266 (364)
T ss_pred ccCeeeccCCHHHeeecc--CCCEEeccccccHHhhhh----hccc----ccccccccChhhhcCCcCCcccceecccHH
Confidence 99999999999999986 899999999999988665 3333 346788899988887777778999999865
Q ss_pred HH
Q 004115 539 AQ 540 (773)
Q Consensus 539 i~ 540 (773)
+-
T Consensus 267 ll 268 (364)
T KOG0581|consen 267 LL 268 (364)
T ss_pred HH
Confidence 43
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.65 E-value=1.4e-15 Score=169.72 Aligned_cols=196 Identities=21% Similarity=0.310 Sum_probs=125.7
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
++|+. ++||.|.||+||.|+- +|+.+|+|+++.. ++ +.+ +--..
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M---------~~~-----------------~Qv~h 187 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EM---------LKK-----------------NQVEH 187 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HH---------Hhh-----------------hhHHH
Confidence 45664 8999999999999998 6999999988321 11 100 00112
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH-HHHH--H
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGR-YAVE--S 452 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~-~li~--~ 452 (773)
+..|-|...|+ + .-.+-+.|..+. ...||+|||++|+.+..+.. ..+.-....++ .+++ .
T Consensus 188 V~aERdiL~~~-----------d--s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vl 252 (550)
T KOG0605|consen 188 VRAERDILAEV-----------D--SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVL 252 (550)
T ss_pred HHHHHHHhhhc-----------C--CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHH
Confidence 23333333332 2 223445554433 45699999999999888642 22222222222 2333 3
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-------------------------------
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL------------------------------- 501 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l------------------------------- 501 (773)
++.-||.+|++|||+||.|+||+. .|.|+|.|||++.-+....+..+
T Consensus 253 AI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (550)
T KOG0605|consen 253 AIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSR 330 (550)
T ss_pred HHHHHHHcCcccccCChhheeecC--CCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhH
Confidence 467899999999999999999986 89999999999875543222221
Q ss_pred ---HHHH-------HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004115 502 ---LEAF-------YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 546 (773)
Q Consensus 502 ---~~l~-------~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 546 (773)
.+.+ ..-.-+.|++|+++.+.---.....|-++|..+++++|-.|
T Consensus 331 ~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy 385 (550)
T KOG0605|consen 331 REQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY 385 (550)
T ss_pred HHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCC
Confidence 1100 01124678888888775433456789999999998887655
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.64 E-value=1.1e-15 Score=170.73 Aligned_cols=191 Identities=20% Similarity=0.286 Sum_probs=130.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-||.|||++|++|+. +++.+||||.-. +- |++| +-++
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K----------~~------------------------Iike------~Kvk 118 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDK----------RY------------------------IIKE------KKVK 118 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhH----------HH------------------------HHhh------cccc
Confidence 5699999999999999 699999998711 00 0000 0011
Q ss_pred H-HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHHHHHHHHh
Q 004115 384 Y-TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESYLEQILS 459 (773)
Q Consensus 384 f-~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~-l~~~~~d~~~la~~li~~~l~qI~~ 459 (773)
| .+|-..|.++. ++|+| -+.|. +.....|.|+||++++.|-++.. .........+.-...+-..++.||.
T Consensus 119 YV~~Ek~~l~~L~----~hPgi--vkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~ 192 (604)
T KOG0592|consen 119 YVTREKEALTQLS----GHPGI--VKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHS 192 (604)
T ss_pred hhhHHHHHHHHhh----CCCCe--EEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHh
Confidence 2 12333333433 34443 23333 33456799999999999988643 2111122223333334455899999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHH-------HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-------LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 532 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~-------l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~ 532 (773)
+|++|||+||.|||++. +++++|.|||.++.+++..... ...-=.+-+-+..++|.++++.-+...+..|.
T Consensus 193 ~GIIHRDlKPENILLd~--dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDi 270 (604)
T KOG0592|consen 193 NGIIHRDLKPENILLDK--DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDL 270 (604)
T ss_pred cCceeccCChhheeEcC--CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccch
Confidence 99999999999999986 9999999999999998876541 01000122346789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 004115 533 TAVRRTAQFFLN 544 (773)
Q Consensus 533 ~~l~~~i~~~l~ 544 (773)
++|.-.++.|+.
T Consensus 271 WAlGCilyQmla 282 (604)
T KOG0592|consen 271 WALGCILYQMLA 282 (604)
T ss_pred HHHHHHHHHHhc
Confidence 999998887764
No 18
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.63 E-value=8.7e-15 Score=145.51 Aligned_cols=164 Identities=23% Similarity=0.262 Sum_probs=106.0
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
++||+|++|+||+|++ +|++||||+.+|+.......+..++ ....... ...++..+. ....
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~---------~~~~ 64 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGR------KKSNWRYLS---------RLWA 64 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhcc------CCcchhhhh---------hHHH
Confidence 4799999999999999 6999999999987654322222111 1111111 011222111 1223
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCC-----hhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIK-----INRIQSLDELGVDRKRLGRYAVESYLEQILS 459 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~-----L~d~~~l~~~~~d~~~la~~li~~~l~qI~~ 459 (773)
..|.+++.++.. ..+.+|+++. +...+|+|||++|.. +.+... ......++.. +...+..+|.
T Consensus 65 ~~e~~~l~~l~~-----~~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~-~~~~l~~lh~ 132 (187)
T cd05119 65 EKEFRNLKRLYE-----AGVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQ-ILELMRKLYR 132 (187)
T ss_pred HHHHHHHHHHHH-----cCCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHH-HHHHHHHHhh
Confidence 445566666654 2366788775 456799999999943 333211 0223333333 3344667888
Q ss_pred -CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHH
Q 004115 460 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL 502 (773)
Q Consensus 460 -~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~ 502 (773)
.|++|+|+||+||+++ ++.++++|||++...+.+....+.
T Consensus 133 ~~~ivH~Dl~p~Nili~---~~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 133 EAGLVHGDLSEYNILVD---DGKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred ccCcCcCCCChhhEEEE---CCcEEEEECcccccccCcchHHHH
Confidence 9999999999999997 688999999999998877666554
No 19
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.61 E-value=6e-15 Score=163.33 Aligned_cols=185 Identities=18% Similarity=0.173 Sum_probs=135.4
Q ss_pred cccccceeEEEEEeecCee-EEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARLKGEE-VVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 307 PIgsaSiGQVhrA~l~G~~-VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
-+|+|++|+||+|.+.|+. ||||+..+.-... .. +-+|.
T Consensus 48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-----------------------------~~-----------~~~f~ 87 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-----------------------------ES-----------RKAFR 87 (362)
T ss_pred hcccCCceeEEEEEeCCceeEEEEEecchhcCh-----------------------------HH-----------HHHHH
Confidence 3999999999999999998 9999884322110 00 34688
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhCC-
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSHG- 461 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li~~~--l~qI~~~G- 461 (773)
+|+.-+.+++ +..-|.+.-++.+-.....|||||++|++|.++... ....++.......+++.. +..+|..+
T Consensus 88 ~E~~il~~l~----HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~ 163 (362)
T KOG0192|consen 88 REASLLSRLR----HPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP 163 (362)
T ss_pred HHHHHHHhCC----CCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8888777743 333344444443322246899999999999998754 355677777666665544 77899999
Q ss_pred CccCCCCCCceEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH--cCCCCCCCChHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ--MGVLVPTGDTTAVRRT 538 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g-~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~--lG~~~~~~D~~~l~~~ 538 (773)
++|+|+||.|||++. ++ .++++|||+++...... ....-..+++..|++++++ -...+...|++++.-.
T Consensus 164 iIHrDLK~~NiLv~~--~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv 235 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDL--KGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV 235 (362)
T ss_pred eeecccChhhEEEcC--CCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH
Confidence 999999999999986 65 99999999998776532 0011146789999999998 5567788899998876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+-+++
T Consensus 236 lWEl~ 240 (362)
T KOG0192|consen 236 LWELL 240 (362)
T ss_pred HHHHH
Confidence 65554
No 20
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=2.3e-14 Score=145.18 Aligned_cols=145 Identities=19% Similarity=0.316 Sum_probs=106.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
++||+|++|.||+|...|..|+||+..|.....-..| .. .....+.
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~-----------------------------~~-----~~~~~~~ 47 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELD-----------------------------ER-----IRRERTR 47 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHH-----------------------------HH-----HHHHHHH
Confidence 4789999999999999999999998866432210000 00 1123566
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 465 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHa 465 (773)
+|++++..+.+ +++.+|.++....+..+++|||++|.+|.++..... .....++..+ ...+.++|..|++|+
T Consensus 48 ~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--~~~~~i~~~i-~~~l~~lH~~~i~H~ 119 (211)
T PRK14879 48 REARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--MEELELSREI-GRLVGKLHSAGIIHG 119 (211)
T ss_pred HHHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc--HHHHHHHHHH-HHHHHHHHhCCcccC
Confidence 77777777653 458889988766788899999999999998753221 1233444433 346889999999999
Q ss_pred CCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 466 DPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 466 DpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
|+||+||+++ ++.++++|||.++..++
T Consensus 120 Dl~p~Nil~~---~~~~~liDf~~a~~~~~ 146 (211)
T PRK14879 120 DLTTSNMILS---GGKIYLIDFGLAEFSKD 146 (211)
T ss_pred CCCcccEEEE---CCCEEEEECCcccCCCc
Confidence 9999999997 57899999999887543
No 21
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=7.1e-16 Score=167.51 Aligned_cols=194 Identities=17% Similarity=0.233 Sum_probs=129.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.+|+|.||-|-.|.- +|+.||||+....--. + .+.....+.
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~------------------------~-----------~s~~~~~~~ 221 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKST------------------------G-----------CSRAIAKTR 221 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcc------------------------c-----------ccccccchh
Confidence 37899999999999998 6999999998421100 0 000112344
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhh-hhhhcCCCHHHHHHHHHHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRYAVESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~-~l~~~~~d~~~la~~li~~~l~qI~~~ 460 (773)
|..+|..-+.++. +|.| .+-..| +-....|+||||++|+.|-|.. +....+.+..+..-..+-..++++|+.
T Consensus 222 ~v~~EieILkkL~-----HP~IV~~~d~f-~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~ 295 (475)
T KOG0615|consen 222 DVQNEIEILKKLS-----HPNIVRIKDFF-EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ 295 (475)
T ss_pred hhHHHHHHHHhcC-----CCCEEEEeeee-ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence 5677777776653 2433 333333 3345569999999999998843 222233333333333344457889999
Q ss_pred CCccCCCCCCceEEecc-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC---CCChHHHH
Q 004115 461 GFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP---TGDTTAVR 536 (773)
Q Consensus 461 GffHaDpHPGNILV~~~-~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~---~~D~~~l~ 536 (773)
|+.|||+||.|||+... .+-.+++.|||+++..... .+++. +.+.+.+++++.+.-+-..- .+|++++.
T Consensus 296 GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~T----lCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG 368 (475)
T KOG0615|consen 296 GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKT----LCGTPSYVAPEVLASKGVEYYPSKVDIWSLG 368 (475)
T ss_pred CcccccCCcceEEeccCCcceEEEecccchhhccccc---eehhh----hcCCccccChhheecCCeecccchheeeecc
Confidence 99999999999999752 2347999999999988632 23333 35789999998887643332 45889988
Q ss_pred HHHHHHHHHH
Q 004115 537 RTAQFFLNSF 546 (773)
Q Consensus 537 ~~i~~~l~~~ 546 (773)
-.++-.+..|
T Consensus 369 cvLfvcLsG~ 378 (475)
T KOG0615|consen 369 CVLFVCLSGY 378 (475)
T ss_pred ceEEEEeccC
Confidence 7776666554
No 22
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.59 E-value=8.1e-15 Score=157.93 Aligned_cols=191 Identities=18% Similarity=0.200 Sum_probs=131.0
Q ss_pred hhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004115 300 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 376 (773)
Q Consensus 300 F~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 376 (773)
.+.|+. +.||.||||+|+..+. +|+-+|+||++.. ..+++ .| .+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~----------------~iv~~----------------~e-~~ 70 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKK----------------KIVEK----------------KE-VR 70 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhh----------------Hhhhh----------------hh-HH
Confidence 356765 8899999999999998 6999999987321 00000 00 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHHHH
Q 004115 377 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESYL 454 (773)
Q Consensus 377 ~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~-l~~~~~d~~~la~~li~~~l 454 (773)
.+.. |..-+.++ ++| +.|...|. +-..+.|||+||+.|+.|--..+ ......++.++-..-+...+
T Consensus 71 ~~~~------Er~IL~~v-----~hP-Fiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL 138 (357)
T KOG0598|consen 71 HTKA------ERNILSKI-----KHP-FIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLAL 138 (357)
T ss_pred HHHH------HHHHHHhC-----CCC-cEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHH
Confidence 2222 22222222 222 22333332 33456799999999999875432 22333455555555566678
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~-Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
..+|+.|++|||+||.|||++. +|.++|.|||+++. +.......- +.+.+++|+++++.-.-....+|-+
T Consensus 139 ~~LH~~gIiyRDlKPENILLd~--~GHi~LtDFgL~k~~~~~~~~t~t-------fcGT~eYmAPEil~~~gy~~~vDWW 209 (357)
T KOG0598|consen 139 GYLHSKGIIYRDLKPENILLDE--QGHIKLTDFGLCKEDLKDGDATRT-------FCGTPEYMAPEILLGKGYDKAVDWW 209 (357)
T ss_pred HHHHhCCeeeccCCHHHeeecC--CCcEEEeccccchhcccCCCcccc-------ccCCccccChHHHhcCCCCcccchH
Confidence 9999999999999999999986 89999999999994 333332211 4678999999999877778889999
Q ss_pred HHHHHHHHHHH
Q 004115 534 AVRRTAQFFLN 544 (773)
Q Consensus 534 ~l~~~i~~~l~ 544 (773)
++...+++|+.
T Consensus 210 sLGillYeML~ 220 (357)
T KOG0598|consen 210 SLGILLYEMLT 220 (357)
T ss_pred hHHHHHHHHhh
Confidence 99998888764
No 23
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.58 E-value=1.3e-14 Score=159.61 Aligned_cols=190 Identities=18% Similarity=0.176 Sum_probs=121.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+.... . -.+....
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----------------~-----------------~~~~~~~------ 47 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM----------------L-----------------EKEQVGH------ 47 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH----------------H-----------------HhhHHHH------
Confidence 6799999999999998 589999998742100 0 0001111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+.++ +++ .+++.+.. .....+|||||++|++|.++... ....+...+...+ +-..+..+|.
T Consensus 48 ~~~E~~il~~~-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~ 119 (363)
T cd05628 48 IRAERDILVEA-----DSL--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQ 119 (363)
T ss_pred HHHHHHHHHhC-----CCC--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23333333332 122 23333332 23457999999999999886532 2233433333322 2234788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHH-----------------------------HHHHhh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA-----------------------------FYGIYE 510 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l-----------------------------~~al~~ 510 (773)
.|++|+|+||.||+++. ++.++|+|||++..+....+..+... ...-..
T Consensus 120 ~givHrDlKp~NILi~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (363)
T cd05628 120 LGFIHRDIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTV 197 (363)
T ss_pred CCeEecCCCHHHeEECC--CCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 99999999999999985 78999999999987654322111000 001123
Q ss_pred cCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 511 KDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 511 ~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+.+.+++++++.-+......|++++...+++++.
T Consensus 198 Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 198 GTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred CCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 5677888888766666777899999988776653
No 24
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.58 E-value=1.5e-14 Score=152.11 Aligned_cols=183 Identities=17% Similarity=0.215 Sum_probs=125.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|.||+|.||+++. +|+-||||.-.-.-. | ..+.+...+|+.
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-----------------------------d-----~~VkKIAlREIr 53 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-----------------------------D-----PVVKKIALREIR 53 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc-----------------------------c-----HHHHHHHHHHHH
Confidence 3589999999999999 699999996521110 1 123344566777
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHh
Q 004115 384 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILS 459 (773)
Q Consensus 384 f~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~--~l~qI~~ 459 (773)
+....+ |+..+-+.|+. ..+.+||.||||-.-|.++... ..|.+...+-..+.+. .+..+|.
T Consensus 54 mLKqLkH~NLVnLiEVFrr-------------krklhLVFE~~dhTvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk 119 (396)
T KOG0593|consen 54 MLKQLKHENLVNLIEVFRR-------------KRKLHLVFEYCDHTVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHK 119 (396)
T ss_pred HHHhcccchHHHHHHHHHh-------------cceeEEEeeecchHHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhh
Confidence 666654 55555555543 3556899999998888776543 4566766555444433 2566789
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
++++|||+||.||||+. .|.++|+|||+++.++. --+.|.+.+..-+-+.++.++. ---..+.+|++++.-.+
T Consensus 120 ~n~IHRDIKPENILit~--~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvG----DtqYG~pVDiWAiGCv~ 192 (396)
T KOG0593|consen 120 NNCIHRDIKPENILITQ--NGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVG----DTQYGKPVDIWAIGCVF 192 (396)
T ss_pred cCeecccCChhheEEec--CCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcc----cCcCCCcccchhhhHHH
Confidence 99999999999999996 89999999999999984 2345666655544555554432 11234568999988765
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 193 aEl~ 196 (396)
T KOG0593|consen 193 AELL 196 (396)
T ss_pred HHHh
Confidence 5544
No 25
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=3.2e-15 Score=164.85 Aligned_cols=184 Identities=17% Similarity=0.235 Sum_probs=127.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-+|.|+||.||+|+- +|+.||||-++. ..+.|. |+-
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~-----------------------------Kf~s~e------------e~~ 54 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKK-----------------------------KFYSWE------------ECM 54 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHh-----------------------------hhccHH------------HHH
Confidence 4689999999999998 799999995421 112232 233
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~--l~qI~~~G 461 (773)
=.+|.+.+.++. .+..-|.+-+|+.+-....++||||++- .|.++...+...+....+-..+.+.+ +.+||.+|
T Consensus 55 nLREvksL~kln---~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G 130 (538)
T KOG0661|consen 55 NLREVKSLRKLN---PHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG 130 (538)
T ss_pred HHHHHHHHHhcC---CCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 345555554442 1333456667776655578999999974 56666555544455555555444433 78899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
|||||+||.||||.. ...|+|.|||+++.+.... .|.+.+-. -...+-+.|++-|......|+++++-.+.+
T Consensus 131 fFHRDlKPENiLi~~--~~~iKiaDFGLARev~Skp--PYTeYVST----RWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 131 FFHRDLKPENILISG--NDVIKIADFGLAREVRSKP--PYTEYVST----RWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred cccccCChhheEecc--cceeEecccccccccccCC--Ccchhhhc----ccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 999999999999985 5789999999999985432 23333222 233456778899999999999999987655
Q ss_pred H
Q 004115 542 F 542 (773)
Q Consensus 542 ~ 542 (773)
+
T Consensus 203 l 203 (538)
T KOG0661|consen 203 L 203 (538)
T ss_pred H
Confidence 4
No 26
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.57 E-value=8.1e-15 Score=168.04 Aligned_cols=198 Identities=19% Similarity=0.175 Sum_probs=135.0
Q ss_pred hhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 300 FERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 300 F~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
+.++..+-+|.|++|.||+++. +|+.||||+-++-.... + .+.
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r---------------------------~--------~e~ 57 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR---------------------------P--------RER 57 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc---------------------------h--------HHH
Confidence 4455567899999999999997 79999999876522100 0 011
Q ss_pred HHHHHHHHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh--hcCCCHHHHHHHHH--H
Q 004115 378 LYQEIDYTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--ELGVDRKRLGRYAV--E 451 (773)
Q Consensus 378 l~~ElDf~~EA--~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--~~~~d~~~la~~li--~ 451 (773)
..+|++..+-. .|+.+.... +.-..+ + --+...+|+||||.|++|..+..-. ..|+...++...+. .
T Consensus 58 ~~~EieilkKLnh~NIVk~f~i----ee~~~~--~-~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~ 130 (732)
T KOG4250|consen 58 WCREIEILKKLNHPNIVKLFDI----EETKFL--G-LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLV 130 (732)
T ss_pred HHHHHHHHHHcCchhhhhhccc----CCcccc--C-cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHH
Confidence 12233322221 233332211 100111 0 1245679999999999998875432 34666666666554 4
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCc--EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVP 528 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~--I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~ 528 (773)
..+..++++|++|||+|||||++-...+|+ -+|+|||.++.+++.. .+ .-+-+..+++.+.+.+- +..+.
T Consensus 131 ~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s------~~-~S~vGT~~YLhPel~E~q~~y~~ 203 (732)
T KOG4250|consen 131 SALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS------LF-TSLVGTEEYLHPELYERQKKYTA 203 (732)
T ss_pred HHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC------ee-eeecCchhhcChHHHhhccCcCc
Confidence 558889999999999999999987544565 5799999999999876 12 22357899999999994 88888
Q ss_pred CCChHHHHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFLNSF 546 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l~~~ 546 (773)
..|.++++..+++....+
T Consensus 204 tVDLWS~GvtlY~caTG~ 221 (732)
T KOG4250|consen 204 TVDLWSFGVTLYECATGE 221 (732)
T ss_pred eeehhhhhhHHHHHhccC
Confidence 899999999888766543
No 27
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.56 E-value=1.5e-13 Score=138.27 Aligned_cols=141 Identities=19% Similarity=0.222 Sum_probs=102.5
Q ss_pred ccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQE 387 (773)
Q Consensus 308 IgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~E 387 (773)
||+|++|.||+|.++|.+|+||+..+.....- .+ + ...+...+.+|
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~-----------------------------~~-~----~~~~~~~~~~E 47 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHP-----------------------------EL-D----ERIRRERTRNE 47 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCc-----------------------------hH-H----HHHHHHHHHHH
Confidence 78999999999999999999998754321110 00 0 00111245667
Q ss_pred HHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCC
Q 004115 388 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADP 467 (773)
Q Consensus 388 A~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDp 467 (773)
.+++..+.+ +++.+|.++.......+++|||++|.++.++..... ..++.. +...+..+|..|++|+|+
T Consensus 48 ~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~~~~~~-i~~~l~~lH~~gi~H~Dl 116 (199)
T TIGR03724 48 ARLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----DELLRE-IGRLVGKLHKAGIVHGDL 116 (199)
T ss_pred HHHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----HHHHHH-HHHHHHHHHHCCeecCCC
Confidence 777777654 357889988877777899999999999988643211 133333 335577899999999999
Q ss_pred CCCceEEeccCCCcEEEEeecceeccChh
Q 004115 468 HPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 468 HPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
||+||+++ +++++++|||+++..++.
T Consensus 117 ~~~Nil~~---~~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 117 TTSNIIVR---DDKLYLIDFGLGKYSDEI 142 (199)
T ss_pred CcceEEEE---CCcEEEEECCCCcCCCcH
Confidence 99999997 689999999998876543
No 28
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=3.6e-14 Score=162.35 Aligned_cols=252 Identities=17% Similarity=0.133 Sum_probs=167.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|.||||.|+.|.+ +++.+|||+++.+.--+ . ||+. .
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-------------------------~-------d~Ve-~------ 414 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-------------------------R-------DEVE-S------ 414 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-------------------------c-------ccHH-H------
Confidence 6799999999999999 68899999996653211 0 1111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCc
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 463 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~Gff 463 (773)
...|.+-.+... .+|.+.--..-++-.++.+.||||+.|+.+..+...+.....+.++...-+-..|+.+|++|++
T Consensus 415 ~~~EkrI~~la~----~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~II 490 (694)
T KOG0694|consen 415 LMCEKRIFELAN----RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGII 490 (694)
T ss_pred HHHHHHHHHHhc----cCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 122332222211 3343333333344456679999999999977765545544556666666677779999999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls-~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+||+|-.|||++. +|.++|+||||++.-- ...+. +-+.+.+++|+++.+.-+-.+..+|=++|...+++|
T Consensus 491 YRDlKLdNiLLD~--eGh~kiADFGlcKe~m~~g~~T-------sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM 561 (694)
T KOG0694|consen 491 YRDLKLDNLLLDT--EGHVKIADFGLCKEGMGQGDRT-------STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM 561 (694)
T ss_pred eeecchhheEEcc--cCcEEecccccccccCCCCCcc-------ccccCChhhcChhhhccCcccchhhHHHHHHHHHHH
Confidence 9999999999986 9999999999999753 22222 335689999999999988889999999999888776
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhhcchhhccccccc
Q 004115 543 LNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGL 622 (773)
Q Consensus 543 l~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~L 622 (773)
|-. +..|... ++ .+++..|+.--..|++-++.+.+.++|.+++-.=--|.-
T Consensus 562 L~G-----------------q~PF~gd-dE-----------ee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG 612 (694)
T KOG0694|consen 562 LVG-----------------ESPFPGD-DE-----------EEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLG 612 (694)
T ss_pred HcC-----------------CCCCCCC-CH-----------HHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccC
Confidence 531 1112211 11 133444444445688889999999999887765322222
Q ss_pred CCCCCHHHh-HHHHHHH
Q 004115 623 DPRFDITEI-AKPYAME 638 (773)
Q Consensus 623 dP~~~i~~~-a~P~~~~ 638 (773)
.++=|.-++ ..||.+.
T Consensus 613 ~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 613 SGERDAEDIKKHPFFRS 629 (694)
T ss_pred CCCCCchhhhhCCcccc
Confidence 223333332 4566544
No 29
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.55 E-value=4.2e-14 Score=153.40 Aligned_cols=183 Identities=19% Similarity=0.182 Sum_probs=119.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||||+.+...... ....-.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------------~~~~~~ 47 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK---------------------------------------LNEVRH 47 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------------hhHHHH
Confidence 6799999999999999 58999999874221000 000112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+..|...+..+. ++++.-..-+.+.....+|||||++|++|.++.... .......+... .+...+..+|..|
T Consensus 48 ~~~e~~~l~~~~-----h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ 121 (333)
T cd05600 48 VLTERDILTTTK-----SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG 121 (333)
T ss_pred HHHHHHHHHhCC-----CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344444333332 233221112223345679999999999999875321 12333332222 2334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++....... .-..+.+.++++++..-+......|++++...+++
T Consensus 122 ivH~dlkp~Nil~~~--~~~~kL~Dfg~a~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 122 YIHRDLKPENFLIDA--SGHIKLTDFGLSKGIVTYA---------NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred ccccCCCHHHEEECC--CCCEEEEeCcCCccccccc---------CCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 999999999999985 8899999999998765411 11235566777887766666677899999988777
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 191 ll~ 193 (333)
T cd05600 191 FLC 193 (333)
T ss_pred hhh
Confidence 653
No 30
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.54 E-value=6.7e-14 Score=144.10 Aligned_cols=185 Identities=19% Similarity=0.207 Sum_probs=121.9
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
++||+|++|.||+|.+ +++.||+|+.++..... .+.++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~-----------------------------------------~~~~~ 39 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE-----------------------------------------LKIKF 39 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH-----------------------------------------HHHHH
Confidence 3689999999999998 68899999875433211 12245
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~Gf 462 (773)
.+|++.+.++ +++++.-+.-+.......++||||++|++|.++........+...+...+.+ ..+..+|..|+
T Consensus 40 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ 114 (250)
T cd05085 40 LSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC 114 (250)
T ss_pred HHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 6666655554 2344332222333445679999999999998865433333454444443332 34678899999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|+||++++ ++.++++|||++..........- ........++++++...+......|++++...+.++
T Consensus 115 ~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~ 187 (250)
T cd05085 115 IHRDLAARNCLVGE--NNVLKISDFGMSRQEDDGIYSSS-----GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWET 187 (250)
T ss_pred eecccChheEEEcC--CCeEEECCCccceeccccccccC-----CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 99999999999985 88999999999876543211000 000112345667766666667778999998766655
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 188 ~ 188 (250)
T cd05085 188 F 188 (250)
T ss_pred h
Confidence 4
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.54 E-value=7e-14 Score=151.86 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=125.0
Q ss_pred hccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
.+|. .+.||+|++|.||+|+. +|+.||||+.+..- +. +
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~---------------------------~----- 58 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-------IL---------------------------K----- 58 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-------Hh---------------------------h-----
Confidence 3443 37899999999999999 58999999874210 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLE 455 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~ 455 (773)
....-++.+|+..+.++. ++++.-..-+.......+++|||++|++|.+..... .......+... .+...+.
T Consensus 59 ~~~~~~~~~E~~~l~~l~-----hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~ 132 (329)
T PTZ00263 59 MKQVQHVAQEKSILMELS-----HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFE 132 (329)
T ss_pred hhhHHHHHHHHHHHHhCC-----CCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHH
Confidence 000012344554444432 233322222223456679999999999998764321 12232222221 2334578
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+|..|++|+|+||.||+++. ++.++|+|||++..++.... ...+.+.++++++..-.......|++++
T Consensus 133 ~LH~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~Diwsl 201 (329)
T PTZ00263 133 YLHSKDIIYRDLKPENLLLDN--KGHVKVTDFGFAKKVPDRTF---------TLCGTPEYLAPEVIQSKGHGKAVDWWTM 201 (329)
T ss_pred HHHHCCeeecCCCHHHEEECC--CCCEEEeeccCceEcCCCcc---------eecCChhhcCHHHHcCCCCCCcceeech
Confidence 899999999999999999985 88999999999998765432 1246778888888876666778899999
Q ss_pred HHHHHHHHH
Q 004115 536 RRTAQFFLN 544 (773)
Q Consensus 536 ~~~i~~~l~ 544 (773)
...+++++.
T Consensus 202 G~il~ellt 210 (329)
T PTZ00263 202 GVLLYEFIA 210 (329)
T ss_pred HHHHHHHHc
Confidence 988776653
No 32
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.53 E-value=5.5e-15 Score=163.63 Aligned_cols=195 Identities=18% Similarity=0.184 Sum_probs=138.3
Q ss_pred ChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004115 295 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 372 (773)
Q Consensus 295 ~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~ 372 (773)
++..+|.-|..+.+|||.||.||-|.+ +|+.|||||... ..+|.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK---------------------lrFp~------------- 604 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK---------------------LRFPT------------- 604 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeec---------------------ccCCC-------------
Confidence 466788888889999999999999999 699999999711 01121
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH---H
Q 004115 373 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY---A 449 (773)
Q Consensus 373 E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~---l 449 (773)
.+|-.+++|..-++.+ ++|+|..-....|-..+.+.|||-+.|--|.-+...+... -++++..- .
T Consensus 605 ------kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgR-L~er~TkFlvtQ 672 (888)
T KOG4236|consen 605 ------KQESQLRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGR-LPERITKFLVTQ 672 (888)
T ss_pred ------chHHHHHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhccc-chHHHHHHHHHH
Confidence 2344556666555544 4577766666667677779999999997776655433322 22333332 2
Q ss_pred HHHHHHHHHhCCCccCCCCCCceEEecc-CCCcEEEEeecceeccChhh-HHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 450 VESYLEQILSHGFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNI-REGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 450 i~~~l~qI~~~GffHaDpHPGNILV~~~-~~g~I~LlDFGlv~~Ls~~~-r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
+-..++.+|..+++|+|+||.|+|+... +-.+++|+|||.++.+.++. |+. +-+.+.+++++.+.-.-..
T Consensus 673 IL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs--------VVGTPAYLaPEVLrnkGyN 744 (888)
T KOG4236|consen 673 ILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS--------VVGTPAYLAPEVLRNKGYN 744 (888)
T ss_pred HHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh--------hcCCccccCHHHHhhcccc
Confidence 3345788999999999999999999752 12589999999999998753 322 3478899988888765556
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
...|++++...++.-+
T Consensus 745 rSLDMWSVGVIiYVsL 760 (888)
T KOG4236|consen 745 RSLDMWSVGVIIYVSL 760 (888)
T ss_pred ccccceeeeEEEEEEe
Confidence 7789998876554433
No 33
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.53 E-value=3.2e-14 Score=156.00 Aligned_cols=192 Identities=17% Similarity=0.159 Sum_probs=120.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+..- + . -.+... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~---------~-----------------~~~~~~------~ 47 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-------M---------L-----------------EKEQVA------H 47 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-------h---------h-----------------hhhHHH------H
Confidence 6799999999999998 68999999873210 0 0 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+..+. ++++.-..-+.+.....+|||||++|++|.++.... ..+....+...+ +...+..+|..|
T Consensus 48 ~~~E~~il~~l~-----h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ 121 (364)
T cd05599 48 VRAERDILAEAD-----NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLG 121 (364)
T ss_pred HHHHHHHHHhCC-----CCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 233433333322 233322222223345679999999999998865322 223333333222 234478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHH--------------------------------HHHh
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAF--------------------------------YGIY 509 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~--------------------------------~al~ 509 (773)
++|+|+||+||+++. ++.++++|||++..+............ ..-.
T Consensus 122 ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (364)
T cd05599 122 YIHRDIKPDNLLLDA--KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST 199 (364)
T ss_pred eEeccCCHHHeEECC--CCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 999999999999985 899999999998876432211100000 0011
Q ss_pred hcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 510 EKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 510 ~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
.+.+.++++++..-+......|++++...+++++.
T Consensus 200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 25667788887766666777899999987776653
No 34
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.53 E-value=6.8e-14 Score=144.44 Aligned_cols=186 Identities=19% Similarity=0.155 Sum_probs=119.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|++ +|+.||+|+.+...... . +-+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~------~~~ 39 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD-----------------------------------L------KAK 39 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH-----------------------------------H------HHH
Confidence 3689999999999998 69999999864322111 1 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
|.+|.+.+.++ +++++.-..-+.......++||||++|++|.++........+...+.... +...+..+|..|
T Consensus 40 ~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 40 FLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred HHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44455444443 22333222222233456799999999999998754332234444433332 223467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|+||++++ ++.++++|||++..+........ .........+++++...-+......|.+++...+++
T Consensus 115 i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 188 (252)
T cd05084 115 CIHRDLAARNCLVTE--KNVLKISDFGMSREEEDGVYAST----GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188 (252)
T ss_pred ccccccchheEEEcC--CCcEEECccccCccccccccccc----CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHH
Confidence 999999999999985 78999999999887653211100 011112334666776666666677899999877766
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 189 ~~ 190 (252)
T cd05084 189 AF 190 (252)
T ss_pred HH
Confidence 55
No 35
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=4.7e-14 Score=156.90 Aligned_cols=186 Identities=19% Similarity=0.245 Sum_probs=126.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||+|+||.|+.|+. +|+.||||+..... .... . ......+.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~--------------------~~~~------~-----~~~~~~i~---- 67 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKK--------------------VSSK------S-----QKLDELIK---- 67 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhc--------------------cccc------c-----cccchhhH----
Confidence 6899999999999998 79999999763320 0000 0 00111222
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~---~~l~qI~~ 459 (773)
+|..+++++. .+|+| .+-.++ +..+..++||||+.|+.|.+.... ...... ..++..++ ..+.++|.
T Consensus 68 --rEi~~~~~~~----~HpnI~~l~ev~-~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisav~y~H~ 138 (370)
T KOG0583|consen 68 --REISILRRLR----SHPNIIRLLEVF-ATPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISAVAYCHS 138 (370)
T ss_pred --HHHHHHHHhc----cCCCEeEEEEEE-ecCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHHHHHHHh
Confidence 3445555554 23443 333444 456668999999999999886543 222222 33333332 34778899
Q ss_pred CCCccCCCCCCceEEeccCC-CcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHc-C-CCCCCCChHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQM-G-VLVPTGDTTAV 535 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~-g~I~LlDFGlv~~Ls-~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G-~~~~~~D~~~l 535 (773)
.|++|||+||+||+++. + +.++++|||++.... +.. + .....+.+.+++++++.. + +-....|++++
T Consensus 139 ~gi~HRDLK~ENilld~--~~~~~Kl~DFG~s~~~~~~~~---~----l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~ 209 (370)
T KOG0583|consen 139 RGIVHRDLKPENILLDG--NEGNLKLSDFGLSAISPGEDG---L----LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSL 209 (370)
T ss_pred CCEeeCCCCHHHEEecC--CCCCEEEeccccccccCCCCC---c----ccCCCCCcccCCHHHhCCCCCcCCchhhhhhh
Confidence 99999999999999986 4 899999999999884 211 1 233467899999999876 5 55567899999
Q ss_pred HHHHHHHHH
Q 004115 536 RRTAQFFLN 544 (773)
Q Consensus 536 ~~~i~~~l~ 544 (773)
...++.++.
T Consensus 210 GViLy~ml~ 218 (370)
T KOG0583|consen 210 GVILYVLLC 218 (370)
T ss_pred HHHHHHHHh
Confidence 988876654
No 36
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=1.7e-14 Score=163.36 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=128.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||.|+||+||+|+. +|+.||+||..-. .|. + ....+.+.+|+.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~----------~l~-----------k------------~~~reKv~~EIe 70 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKK----------LLK-----------K------------PKQREKVLNEIE 70 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehH----------Hhc-----------C------------cchHHHHHHHHH
Confidence 6799999999999998 6999999998210 000 0 012233444544
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
..+..+ |+.+|.+.| |.++..|||.|+|+-.+|..+.. +...++..+....+ +-..++.+|.
T Consensus 71 IHr~L~HpnIV~f~~~F-------------EDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~ 136 (592)
T KOG0575|consen 71 IHRSLKHPNIVQFYHFF-------------EDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHS 136 (592)
T ss_pred HHHhcCCCcEEeeeeEe-------------ecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 433321 333333333 44666799999999999999865 33334433333322 3344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChh-hHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN-IREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~-~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
+|++|||+|-||||+++ +-.+++.|||++..+... +|.. -+.+.+.+++++.+.-.-....+|++++.-.
T Consensus 137 ~~IiHRDLKLGNlfL~~--~~~VKIgDFGLAt~le~~~Erk~-------TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcv 207 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLNE--NMNVKIGDFGLATQLEYDGERKK-------TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCV 207 (592)
T ss_pred cCceecccchhheeecC--cCcEEecccceeeeecCcccccc-------eecCCCcccChhHhccCCCCCchhhhhhhhH
Confidence 99999999999999985 679999999999999744 4432 2468999999999986556677899999988
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
++-+|-
T Consensus 208 mYtLL~ 213 (592)
T KOG0575|consen 208 MYTLLV 213 (592)
T ss_pred HHhhhh
Confidence 877763
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.53 E-value=8.6e-14 Score=148.52 Aligned_cols=186 Identities=20% Similarity=0.183 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee------------------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004115 306 EPIAAASLGQVHRARL------------------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 367 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------------------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~ 367 (773)
+.||+|++|.||+|++ ++..||||+.++.....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 5799999999999975 23479999986643211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------
Q 004115 368 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL--------- 438 (773)
Q Consensus 368 ~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~--------- 438 (773)
...+|.+|.+.+.++. ++++.-..-+.......+++|||++|++|.++......
T Consensus 62 ------------~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (304)
T cd05096 62 ------------ARNDFLKEVKILSRLK-----DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND 124 (304)
T ss_pred ------------HHHHHHHHHHHHhhcC-----CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccc
Confidence 0124556665555542 23332222222334567999999999999886532111
Q ss_pred ---------CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHH
Q 004115 439 ---------GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYG 507 (773)
Q Consensus 439 ---------~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~a 507 (773)
......+...+ +...+..+|..|++|+|+||.||++++ ++.++|+|||++..+........ .+
T Consensus 125 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~----~~ 198 (304)
T cd05096 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRI----QG 198 (304)
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcC--CccEEECCCccceecccCceeEe----cC
Confidence 01112222222 234478899999999999999999986 78999999999987644321110 01
Q ss_pred HhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 508 IYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 508 l~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.......+++++....+...+..|++++.-.+.+++
T Consensus 199 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 199 RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred cCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 111234567777776677777889999988777665
No 38
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.53 E-value=3.9e-14 Score=158.50 Aligned_cols=179 Identities=22% Similarity=0.219 Sum_probs=130.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.||+|.||+|+. +++.||+|....-- .-+.|+ +.+.+|++
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l--------------------------------~~l~~ev~ 53 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKEL--------------------------------KNLRQEVR 53 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcC--CchHHH--------------------------------HHHHHHHH
Confidence 5699999999999999 58999999872111 001111 34556666
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHH
Q 004115 384 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQIL 458 (773)
Q Consensus 384 f~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l---i~~~l~qI~ 458 (773)
..++.+ |+..|.+-|. -+++.++|.||+.| .|..+...+. .-+++.++.+ +-..+..+|
T Consensus 54 i~r~lkHpniv~m~esfE-------------t~~~~~vVte~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLh 117 (808)
T KOG0597|consen 54 ILRSLKHPNIVEMLESFE-------------TSAHLWVVTEYAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLH 117 (808)
T ss_pred HHHhcCCcchhhHHHhhc-------------ccceEEEEehhhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 666654 6666665553 36678999999999 7777654322 2222222222 234588999
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
.+++.|+|+||.||++.. +|.++++|||+++..+... .+..-+.+.+-+|++++.+-+...-..|++++.-.
T Consensus 118 s~rilhrd~kPqniLl~~--~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGci 189 (808)
T KOG0597|consen 118 SNRILHRDMKPQNILLEK--GGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCI 189 (808)
T ss_pred hcCcccccCCcceeeecC--CCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHH
Confidence 999999999999999985 8999999999999887643 23445689999999999998777778899999988
Q ss_pred HHHH
Q 004115 539 AQFF 542 (773)
Q Consensus 539 i~~~ 542 (773)
++++
T Consensus 190 lYE~ 193 (808)
T KOG0597|consen 190 LYEL 193 (808)
T ss_pred HHHH
Confidence 7765
No 39
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.53 E-value=2.2e-14 Score=157.50 Aligned_cols=189 Identities=18% Similarity=0.213 Sum_probs=118.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||||+.++.- . . -.+... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~---------~-----------------~~~~~~------~ 47 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD-------M---------L-----------------EKEQVA------H 47 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-------H---------h-----------------hhhhHH------H
Confidence 6899999999999998 58999999884210 0 0 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+..+ ++++ +++.+. +.....+|||||++|++|.++... ....+...+...+ +...+..+|.
T Consensus 48 ~~~e~~~l~~l-----~~~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~ 119 (360)
T cd05627 48 IRAERDILVEA-----DGAW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQ 119 (360)
T ss_pred HHHHHHHHHhC-----CCCC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23333333332 1222 333333 233456999999999999886532 1223333322222 2234788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHH-----------------------------HHHhh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAF-----------------------------YGIYE 510 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~-----------------------------~al~~ 510 (773)
.|++|+|+||+||+++. +|.++|+|||++..+.......+..-. .....
T Consensus 120 ~givHrDLkp~NIli~~--~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (360)
T cd05627 120 LGFIHRDIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTV 197 (360)
T ss_pred CCeEccCCCHHHEEECC--CCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccC
Confidence 99999999999999985 899999999998876443221110000 00123
Q ss_pred cCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 511 KDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 511 ~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+.+.+++++++.-.......|++++...+++++
T Consensus 198 gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 198 GTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred CCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence 566788888876555667789999987766654
No 40
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.52 E-value=9.1e-14 Score=151.06 Aligned_cols=185 Identities=14% Similarity=0.115 Sum_probs=120.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||+|++|+||+|.. +|+.||||+.++..... .+ ....+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~------~~~~~ 42 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA---------------------------------KD------EVAHT 42 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHHH
Confidence 589999999999998 68999999985321000 00 01133
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
.+|.+.+..+. ++++.-...+.+.....++||||++|++|.+.... ....+...+...+ +...+..+|..|+
T Consensus 43 ~~E~~~l~~l~-----hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~i 116 (328)
T cd05593 43 LTESRVLKNTR-----HPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKI 116 (328)
T ss_pred HHHHHHHHhCC-----CCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 44554444332 23332222222345567999999999999775432 1223333333222 3344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-+......|++++...+.++
T Consensus 117 vHrDikp~NIll~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 188 (328)
T cd05593 117 VYRDLKLENLMLDK--DGHIKITDFGLCKEGITDAAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (328)
T ss_pred EecccCHHHeEECC--CCcEEEecCcCCccCCCcccc------cccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence 99999999999985 889999999998764322110 0112356677888887666667788999998877766
Q ss_pred HH
Q 004115 543 LN 544 (773)
Q Consensus 543 l~ 544 (773)
+.
T Consensus 189 lt 190 (328)
T cd05593 189 MC 190 (328)
T ss_pred hh
Confidence 53
No 41
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.52 E-value=4.6e-14 Score=156.52 Aligned_cols=190 Identities=15% Similarity=0.161 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+.+..- + .-.+... .
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~-------~--------------------------~~~~~~~------~ 47 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKD-------V--------------------------LNRNQVA------H 47 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-------h--------------------------hhhHHHH------H
Confidence 5799999999999998 68999999874210 0 0000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
+..|...+.++ ++++ +++.+. ......++||||++|+.|.++.... ...+...+... -+...+..+|.
T Consensus 48 ~~~E~~il~~l-----~h~~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~ 119 (381)
T cd05626 48 VKAERDILAEA-----DNEW--VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHK 119 (381)
T ss_pred HHHHHHHHHhc-----CCCC--eeeeEEEEecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34444434333 2233 233332 3345679999999999998864321 12232222111 23345788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHH---------------------------------HH--
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL---------------------------------EA-- 504 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~---------------------------------~l-- 504 (773)
.|++|+|+||.||+++. ++.++|+|||++..+.......+. ..
T Consensus 120 ~givHrDlKp~Nili~~--~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (381)
T cd05626 120 MGFIHRDIKPDNILIDL--DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRAT 197 (381)
T ss_pred CCeeecCCcHHHEEECC--CCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccc
Confidence 99999999999999985 789999999997654211100000 00
Q ss_pred ------HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 505 ------FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 505 ------~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
...-..+...+++++++.-.......|++++...+++++.
T Consensus 198 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ellt 243 (381)
T cd05626 198 KQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLV 243 (381)
T ss_pred ccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHh
Confidence 0001235667888887765555677899999988777653
No 42
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.52 E-value=1.3e-13 Score=149.14 Aligned_cols=184 Identities=22% Similarity=0.209 Sum_probs=117.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||+|++|+||+|+. +|+.||||+.++..... . ++. . .+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------------------~-------------~~~-~------~~ 42 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-------------------D-------------DDV-E------CT 42 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-------------------c-------------cHH-H------HH
Confidence 589999999999998 58999999875321000 0 000 0 11
Q ss_pred HHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
..|...+... .++++|. +...+ +.....++||||++|++|.+..... ...+...+...+ +...+..+|..|
T Consensus 43 ~~e~~~l~~~----~~h~~iv~~~~~~-~~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ 116 (320)
T cd05590 43 MTEKRILSLA----RNHPFLTQLYCCF-QTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG 116 (320)
T ss_pred HHHHHHHHhc----cCCCchhceeeEE-EcCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2222222221 1233322 22222 3345679999999999998754321 223433333322 334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++......... .....+++.++++++..-....+..|++++...+++
T Consensus 117 ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 117 IIYRDLKLDNVLLDH--EGHCKLADFGMCKEGIFNGKT------TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred eEeCCCCHHHeEECC--CCcEEEeeCCCCeecCcCCCc------ccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 999999999999985 889999999998764322111 011245677888888776666777899999987776
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 189 l~ 190 (320)
T cd05590 189 ML 190 (320)
T ss_pred Hh
Confidence 65
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.52 E-value=7.6e-14 Score=151.05 Aligned_cols=184 Identities=15% Similarity=0.103 Sum_probs=118.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||||+.++..... . .+ ...+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------~----~~-------~~~~ 42 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----------------------------K----DE-------VAHT 42 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------h----HH-------HHHH
Confidence 589999999999998 68999999884311000 0 00 0123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|.+.+.++. ++++.-..-+.+.....++||||++|++|.+.... ....+...+.... +...++.+|..|+
T Consensus 43 ~~e~~~l~~l~-----hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i 116 (323)
T cd05571 43 LTESRVLQNTR-----HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDV 116 (323)
T ss_pred HHHHHHHHhCC-----CCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34444444432 23332222222345567999999999999776432 1223333333222 3344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-.......|++++...+.++
T Consensus 117 vHrDlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 188 (323)
T cd05571 117 VYRDLKLENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred EeCCCCHHHEEECC--CCCEEEeeCCCCcccccCCCc------ccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence 99999999999985 889999999998754221111 0112356677888877655566778999998877665
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 189 l 189 (323)
T cd05571 189 M 189 (323)
T ss_pred h
Confidence 5
No 44
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.52 E-value=1.4e-13 Score=148.65 Aligned_cols=185 Identities=21% Similarity=0.159 Sum_probs=116.8
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|+||+|+. +|+.||||+.++..... ++... .+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~~ 42 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ---------------------------------DDDVD------CT 42 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh---------------------------------hhHHH------HH
Confidence 589999999999998 58899999874321100 00000 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|.+-+.. ..++++|....-+.+.....+|||||++|++|.+.... ....+...+...+ +...+..+|..|+
T Consensus 43 ~~e~~il~~----~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i 117 (321)
T cd05591 43 MTEKRILAL----AAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGV 117 (321)
T ss_pred HHHHHHHHh----ccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 223322222 12334332222222334567999999999999775432 1223333333222 3345788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-....+..|++++...+.++
T Consensus 118 vHrDikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (321)
T cd05591 118 IYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGVT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEM 189 (321)
T ss_pred eccCCCHHHeEECC--CCCEEEeecccceecccCCcc------ccccccCccccCHHHHcCCCCCCccceechhHHHHHH
Confidence 99999999999985 889999999998764322111 0112356677788877666667778999998877766
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 190 ~ 190 (321)
T cd05591 190 M 190 (321)
T ss_pred h
Confidence 5
No 45
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.52 E-value=7.7e-14 Score=151.00 Aligned_cols=185 Identities=18% Similarity=0.172 Sum_probs=116.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|+||+|+. +|+.||||+.+...... .+ ....+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~~ 42 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN---------------------------------RK------EQKHI 42 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHHH
Confidence 589999999999998 69999999874321000 00 00111
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|... +.+.+. ++++.-..-+.+.....+++|||++|+.|.+.... ........+...+ +...+..+|..|+
T Consensus 43 ~~e~~~---~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~gi 117 (325)
T cd05604 43 MAERNV---LLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINI 117 (325)
T ss_pred HHHHHH---HHHhCC-CCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222211 111222 23322111122335567999999999998765432 2223333332222 3344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||+||+++. ++.++|+|||++.......... ....+.+.++++++..-+......|++++...+.++
T Consensus 118 vH~Dlkp~NIll~~--~~~~kL~DfG~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (325)
T cd05604 118 VYRDLKPENILLDS--QGHVVLTDFGLCKEGIAQSDTT------TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEM 189 (325)
T ss_pred eecCCCHHHeEECC--CCCEEEeecCCcccCCCCCCCc------ccccCChhhCCHHHHcCCCCCCcCccccccceehhh
Confidence 99999999999986 8899999999987542211110 112356778888887766667778999998877666
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 190 ~ 190 (325)
T cd05604 190 L 190 (325)
T ss_pred h
Confidence 5
No 46
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.52 E-value=7.8e-14 Score=150.93 Aligned_cols=185 Identities=17% Similarity=0.131 Sum_probs=116.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||+|+........ -..+.++
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~~ 42 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK---------------------------------------KKEEKHI 42 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh---------------------------------------hhHHHHH
Confidence 589999999999998 57899999874210000 0001122
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~Gf 462 (773)
..|...+ ...+ ++++|.-..-+.+.....+++|||++|+++.++.... .......+... -+...+..+|..|+
T Consensus 43 ~~e~~~~---l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~gi 117 (325)
T cd05602 43 MSERNVL---LKNV-KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNI 117 (325)
T ss_pred HHHHHHH---HHhC-CCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 2222111 1222 2233322222223345679999999999998765322 22232222222 23344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||+||+++. ++.++|+|||++......... .....+.+.++++++..-+......|++++...+.++
T Consensus 118 iHrDlkp~Nili~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (325)
T cd05602 118 VYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNGT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 189 (325)
T ss_pred EecCCCHHHeEECC--CCCEEEccCCCCcccccCCCC------cccccCCccccCHHHHcCCCCCCccccccccHHHHHH
Confidence 99999999999985 889999999998764321110 0112356778888887766666778999998877766
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 190 ~ 190 (325)
T cd05602 190 L 190 (325)
T ss_pred h
Confidence 5
No 47
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.52 E-value=2.4e-14 Score=161.66 Aligned_cols=195 Identities=17% Similarity=0.131 Sum_probs=130.4
Q ss_pred ChhhhhhccCc-ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHH
Q 004115 295 PLDDVFERFDV-EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 373 (773)
Q Consensus 295 ~~~eiF~~fd~-~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E 373 (773)
.|+..++++.. ++||+||||.||||.+.| +||||+..-.- .-++
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~----------------------------------pt~~ 430 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDD----------------------------------PTPE 430 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCC----------------------------------CCHH
Confidence 45555555543 789999999999999988 59999882111 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCC--CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--
Q 004115 374 CASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA-- 449 (773)
Q Consensus 374 ~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st--~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l-- 449 (773)
..+ .|.+|..|+++-++.. | ..+..+|+ ...+|+.||+|-+|..........++..++...+
T Consensus 431 qlq------aFKnEVa~lkkTRH~N-----I---lLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQ 496 (678)
T KOG0193|consen 431 QLQ------AFKNEVAVLKKTRHEN-----I---LLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQ 496 (678)
T ss_pred HHH------HHHHHHHHHhhcchhh-----h---eeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHH
Confidence 111 3677777766655421 1 11223332 2378899999999998765555555655444333
Q ss_pred HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC--
Q 004115 450 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV-- 527 (773)
Q Consensus 450 i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~-- 527 (773)
+...+.++|..+|+|+|+|.-||++.+ ++++++.|||++..-+.-... .=+..-.+..-+|+++++.|+-..
T Consensus 497 iaqGM~YLHAK~IIHrDLKSnNIFl~~--~~kVkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPf 570 (678)
T KOG0193|consen 497 IAQGMDYLHAKNIIHRDLKSNNIFLHE--DLKVKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPF 570 (678)
T ss_pred HHHhhhhhhhhhhhhhhccccceEEcc--CCcEEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCC
Confidence 334477899999999999999999985 799999999998753321110 001223455678888888886543
Q ss_pred -CCCChHHHHHHHHHHHH
Q 004115 528 -PTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 528 -~~~D~~~l~~~i~~~l~ 544 (773)
+..|++++.-..++++.
T Consensus 571 S~qSDVYaFGiV~YELlt 588 (678)
T KOG0193|consen 571 SFQSDVYAFGIVWYELLT 588 (678)
T ss_pred CcccchhhhhHHHHHHHh
Confidence 45799999988877764
No 48
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.52 E-value=2.1e-13 Score=138.18 Aligned_cols=176 Identities=26% Similarity=0.350 Sum_probs=113.6
Q ss_pred EEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004115 316 VHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD--GAKRDWVAIYDECASVLYQEIDYTQEAANAE 392 (773)
Q Consensus 316 VhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~--~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~ 392 (773)
||.|.. +|.+||||+-|.+...- . ........ .+.+. ....+|..+. .....+|++|+.
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~F-k-------~~~~y~~~-~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L~ 63 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSF-K-------RRKKYRDY-DYRFKKYRHKSSWRYLI---------REWAKKEFRNLK 63 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS---------HHHHHTTT-STTSTTC--G--CHHHH---------HHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceEE-E-------Eeeeeecc-cchhcccccccCHHHHH---------HHHHHHHHHHHH
Confidence 899998 89999999998875432 1 12222221 11110 0112233222 234577888888
Q ss_pred HHHHhcCCCCccccceeeeccCCCeEEEEeecC--CCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCCCCC
Q 004115 393 LFASNFKDMDYVKVPTIFWEYTTPQILTMEYVP--GIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPG 470 (773)
Q Consensus 393 rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyie--G~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDpHPG 470 (773)
++.+ .++.+|++|. .++.+|||||++ |.++..+........+...+...++.....++|..|++|+||++.
T Consensus 64 ~l~~-----~Gv~vP~p~~--~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~ 136 (188)
T PF01163_consen 64 RLYE-----AGVPVPKPYD--YNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY 136 (188)
T ss_dssp HCCC-----TT-SS--EEE--EETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred HHHH-----CCccCCcEEE--EeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence 8754 4688999994 468899999999 988887765443345677888888888888899999999999999
Q ss_pred ceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004115 471 NIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 526 (773)
Q Consensus 471 NILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~ 526 (773)
||++.+ +++++||||.+...+...-.. ++.+|.+.+...+...|..
T Consensus 137 NIlv~~---~~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 137 NILVDD---GKVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp SEEEET---TCEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred hEEeec---ceEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence 999984 599999999998877544332 3467888888888877753
No 49
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.52 E-value=1.5e-13 Score=146.34 Aligned_cols=181 Identities=20% Similarity=0.181 Sum_probs=118.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+....-... ....-.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~ 47 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR---------------------------------------LKQEQH 47 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---------------------------------------hHHHHH
Confidence 6799999999999998 58999999873210000 000112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+.+|...+.++. +++ +.+++. ......++||||++|++|.++.... ...........+ +...+..+|.
T Consensus 48 ~~~E~~~l~~l~-----hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~ 119 (291)
T cd05612 48 VHNEKRVLKEVS-----HPF--IIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHS 119 (291)
T ss_pred HHHHHHHHHhCC-----CCc--HhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 334444333332 122 222222 2234568999999999998865322 223333332222 2344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||+++. +|.++++|||++..+...... ..+.+.++++++..-.......|++++...+
T Consensus 120 ~~i~H~dlkp~NIli~~--~~~~kl~Dfg~~~~~~~~~~~---------~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 188 (291)
T cd05612 120 KEIVYRDLKPENILLDK--EGHIKLTDFGFAKKLRDRTWT---------LCGTPEYLAPEVIQSKGHNKAVDWWALGILI 188 (291)
T ss_pred CCeeecCCCHHHeEECC--CCCEEEEecCcchhccCCccc---------ccCChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999999999985 889999999999877543211 2356677778877655556778999999887
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
++++.
T Consensus 189 ~~l~~ 193 (291)
T cd05612 189 YEMLV 193 (291)
T ss_pred HHHHh
Confidence 77653
No 50
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.51 E-value=1.6e-13 Score=148.20 Aligned_cols=185 Identities=17% Similarity=0.131 Sum_probs=116.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||||+.+...... . ++. . .+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~-------------------------------~~~-~------~~ 42 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-D-------------------------------DDV-E------CT 42 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-h-------------------------------hhH-H------HH
Confidence 589999999999998 58899999985422100 0 000 0 01
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|...+. ...+++++.-..-+.+.....++||||++|++|.++... ....+...+...+ +...+..+|..|+
T Consensus 43 ~~e~~~l~----~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05592 43 MVERRVLA----LAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGI 117 (316)
T ss_pred HHHHHHHH----hccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 11211111 111233332211122234567999999999999876432 1233443333322 3334788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++|+|||++......... . ....++..++++++..-.......|++++...+.++
T Consensus 118 vH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~~~~~~--~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 118 IYRDLKLDNVLLDK--DGHIKIADFGMCKENMNGEGK--A----STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred EeCCCCHHHeEECC--CCCEEEccCcCCeECCCCCCc--c----ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 99999999999985 889999999998765332211 0 112356677788877655566778999999877766
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 190 l 190 (316)
T cd05592 190 L 190 (316)
T ss_pred H
Confidence 5
No 51
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.2e-13 Score=155.43 Aligned_cols=188 Identities=20% Similarity=0.236 Sum_probs=139.5
Q ss_pred hhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHH
Q 004115 296 LDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 373 (773)
Q Consensus 296 ~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E 373 (773)
+...|..| +-||.|+-|-||.|+- +++.||||.. ++..+ |+
T Consensus 271 P~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m--~l~~Q-------------------~~-------------- 313 (550)
T KOG0578|consen 271 PRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRM--DLRKQ-------------------PK-------------- 313 (550)
T ss_pred hhhhhcch--hhhccccccceeeeeeccCCceEEEEEE--EeccC-------------------Cc--------------
Confidence 33444443 4699999999999998 6899999976 11111 10
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH-
Q 004115 374 CASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV- 450 (773)
Q Consensus 374 ~~~~l~~ElDf~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li- 450 (773)
++.+..|+...++.+ |+..|-+.|. +..+.|.||||++|+.|.|+... ...+..++|...-
T Consensus 314 -keLilnEi~Vm~~~~H~NiVnfl~Syl-------------v~deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icre 377 (550)
T KOG0578|consen 314 -KELLLNEILVMRDLHHPNIVNFLDSYL-------------VGDELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICRE 377 (550)
T ss_pred -hhhhHHHHHHHHhccchHHHHHHHHhc-------------ccceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHHH
Confidence 123445666666553 7777766542 13678999999999999998543 3356666766543
Q ss_pred -HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004115 451 -ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 529 (773)
Q Consensus 451 -~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~ 529 (773)
-..|+.+|..|++|+|+|..|||+.. +|.++|.|||++.+++++... ..-+-+.+.+|+++........+.
T Consensus 378 ~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFcaqi~~~~~K------R~TmVGTPYWMAPEVvtrk~YG~K 449 (550)
T KOG0578|consen 378 ILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCAQISEEQSK------RSTMVGTPYWMAPEVVTRKPYGPK 449 (550)
T ss_pred HHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeeeccccccCc------cccccCCCCccchhhhhhcccCcc
Confidence 34588999999999999999999986 899999999999999987621 133458999999999998777788
Q ss_pred CChHHHHHHHHHHHH
Q 004115 530 GDTTAVRRTAQFFLN 544 (773)
Q Consensus 530 ~D~~~l~~~i~~~l~ 544 (773)
+|+++|.-.+-+|++
T Consensus 450 VDIWSLGIMaIEMve 464 (550)
T KOG0578|consen 450 VDIWSLGIMAIEMVE 464 (550)
T ss_pred ccchhhhhHHHHHhc
Confidence 999999977666554
No 52
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.51 E-value=1.8e-13 Score=148.06 Aligned_cols=187 Identities=17% Similarity=0.085 Sum_probs=120.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+.+...... ++ ....
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~ 46 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DD------DVEC 46 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHH
Confidence 5799999999999998 57899999985321100 00 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|.+.+... .+++.+....-+.+.....++||||++|++|.+..... ...+...+...+ +...+..+|..|
T Consensus 47 ~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ 121 (323)
T cd05616 47 TMVEKRVLALS----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKG 121 (323)
T ss_pred HHHHHHHHHhc----cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233322222 22333322222223345579999999999998754321 223333333332 223477899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||+||+++. ++.++|+|||++......... .....+.+.++++++...+......|++++...+.+
T Consensus 122 ivHrDlkp~Nill~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 122 IIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred EEecCCCHHHeEECC--CCcEEEccCCCceecCCCCCc------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 999999999999986 889999999998764322111 011245778888888887777788899999988777
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 194 llt 196 (323)
T cd05616 194 MLA 196 (323)
T ss_pred HHh
Confidence 653
No 53
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.51 E-value=1e-13 Score=149.82 Aligned_cols=184 Identities=18% Similarity=0.182 Sum_probs=115.3
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|+||+|+. +|+.||||+..+..... . ....++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~------~~~~~~ 42 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK---------------------------------K------KEQKHI 42 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------h------hHHHHH
Confidence 589999999999999 69999999874321000 0 000112
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
..|... +.+.+. ++++ .+-..+ +.....++||||++|++|.++.... .......+... .+...+..+|..|
T Consensus 43 ~~e~~~---~~~~l~-hp~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g 116 (323)
T cd05575 43 MAERNV---LLKNVK-HPFLVGLHYSF-QTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN 116 (323)
T ss_pred HHHHHH---HHhhCC-CCCCCCeeEEE-EeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 222211 112222 2332 222222 3345679999999999998764322 22333333222 2334478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++......... .....+.+.+++++...-+......|++++...+.+
T Consensus 117 ivH~dikp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (323)
T cd05575 117 IIYRDLKPENILLDS--QGHVVLTDFGLCKEGIEHSKT------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYE 188 (323)
T ss_pred eEeCCCCHHHeEECC--CCcEEEeccCCCcccccCCCc------cccccCChhhcChhhhcCCCCCccccccccchhhhh
Confidence 999999999999985 889999999998754221110 011235667777877766666677899999887776
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 189 ll 190 (323)
T cd05575 189 ML 190 (323)
T ss_pred hh
Confidence 65
No 54
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.51 E-value=1.9e-13 Score=148.14 Aligned_cols=187 Identities=16% Similarity=0.092 Sum_probs=118.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|+||+|.. +|+.||||+.+...... ++ ..-.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~------~~~~ 46 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DD------DVEC 46 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHH
Confidence 6799999999999998 68999999874211000 00 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+... .+++.+..-.-+.+.....++||||++|++|.++.... ..++...+...+ +...+..+|..|
T Consensus 47 ~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ 121 (323)
T cd05615 47 TMVEKRVLALQ----DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG 121 (323)
T ss_pred HHHHHHHHHhc----cCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23343333222 22233221111222345679999999999998764321 223333333322 223478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||+||+++. ++.++|+|||++......... .....+++.++++++...+......|.+++...+.+
T Consensus 122 ivHrDikp~Nill~~--~~~ikL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 122 IIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGVT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred eeccCCCHHHeEECC--CCCEEEeccccccccCCCCcc------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 999999999999985 889999999998764322110 011235667788888776666778899999887776
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 194 llt 196 (323)
T cd05615 194 MLA 196 (323)
T ss_pred HHh
Confidence 653
No 55
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.50 E-value=2.5e-13 Score=144.00 Aligned_cols=184 Identities=16% Similarity=0.116 Sum_probs=122.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|+.||||+..+..... ...+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------------RKGEAM 46 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh---------------------------------------hhhHHH
Confidence 5799999999999998 69999999873321000 011223
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+.+|.+.+.++.+ +++ .+...+ ......+++|||++|++|.+..... ....+...+...+ +...+..+|.
T Consensus 47 ~~~E~~il~~l~~-----~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 47 ALNEKRILEKVNS-----RFVVSLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred HHHHHHHHHhcCC-----CcEEEEEEEE-ccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4556665555432 222 222222 3345679999999999998754321 2234444433332 3344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||++++ ++.++++|||++..++..... .-..+...++++++..-+......|++++...+
T Consensus 121 ~~iiH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil 191 (285)
T cd05631 121 ERIVYRDLKPENILLDD--RGHIRISDLGLAVQIPEGETV-------RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLI 191 (285)
T ss_pred CCEEeCCCCHHHEEECC--CCCEEEeeCCCcEEcCCCCee-------cCCCCCCCccCHhhhcCCCCCcccCchhHHHHH
Confidence 99999999999999985 789999999999876543211 011345667778877766667778999998877
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 192 ~el~ 195 (285)
T cd05631 192 YEMI 195 (285)
T ss_pred HHHH
Confidence 6655
No 56
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.50 E-value=1.8e-13 Score=148.51 Aligned_cols=86 Identities=15% Similarity=0.075 Sum_probs=62.1
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|+||.||+++. ++.++++|||++..+........ .+.......+++++...-+......|
T Consensus 185 ~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sD 258 (338)
T cd05102 185 RGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVR----KGSARLPLKWMAPESIFDKVYTTQSD 258 (338)
T ss_pred HHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhc----ccCCCCCccccCcHHhhcCCCCcccC
Confidence 4478899999999999999999985 78999999999987643221100 01111224566777766666677889
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 259 iwslG~il~el~ 270 (338)
T cd05102 259 VWSFGVLLWEIF 270 (338)
T ss_pred HHHHHHHHHHHH
Confidence 999998776654
No 57
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=4.1e-14 Score=157.16 Aligned_cols=192 Identities=22% Similarity=0.265 Sum_probs=124.3
Q ss_pred hhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 298 DVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 298 eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
+.|+.+ +-||.|.|||||+|+. +|+.||+|-.|=+..+ ++|-
T Consensus 117 ~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~----------------------------------~~~~ 160 (560)
T KOG0600|consen 117 DSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK----------------------------------EGFP 160 (560)
T ss_pred HHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCC----------------------------------Ccch
Confidence 344444 3599999999999998 7999999977533211 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCc-cccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HH
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDY-VKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VE 451 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~-V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~ 451 (773)
..+.+|+- -++++ ++++ |..-.++. .+++..|||.||++- .|.-+.......+...++-... +-
T Consensus 161 ~t~~REI~------ILr~l-----~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl 228 (560)
T KOG0600|consen 161 ITAIREIK------ILRRL-----DHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLL 228 (560)
T ss_pred HHHHHHHH------HHHhc-----CCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHH
Confidence 23333332 23333 2222 23333332 346788999999985 3333332222234444332222 22
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+.++|..||+|||+|..||||+. +|.++|.|||+++.+++.....|..-++.+.-+-++.++ ..--....+|
T Consensus 229 ~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLL----G~t~Yg~aVD 302 (560)
T KOG0600|consen 229 EGLEYCHSRGVLHRDIKGSNILIDN--NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLL----GATSYGTAVD 302 (560)
T ss_pred HHHHHHhhcCeeeccccccceEEcC--CCCEEeccccceeeccCCCCcccccceEEeeccChHHhc----CCccccccee
Confidence 3367788999999999999999985 899999999999999998888887777777777776543 2223456779
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
+++..-++.+++
T Consensus 303 lWS~GCIl~El~ 314 (560)
T KOG0600|consen 303 LWSVGCILAELF 314 (560)
T ss_pred ehhhhHHHHHHH
Confidence 998887665543
No 58
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.50 E-value=7.4e-14 Score=154.13 Aligned_cols=191 Identities=18% Similarity=0.189 Sum_probs=116.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+.. +. . ..+... .
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~-------~~---------~-----------------~~~~~~------~ 47 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKA-------DV---------L-----------------MRNQAA------H 47 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHH-------HH---------H-----------------hhhhHH------H
Confidence 6899999999999998 6899999987321 00 0 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+.+|...+.++ ++++|.-..-..+.....++||||++|++|.++.... ...+...+... .+...+..+|..|
T Consensus 48 ~~~E~~il~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (376)
T cd05598 48 VKAERDILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG 121 (376)
T ss_pred HHHHHHHHHhC-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33344333333 2233322222223346679999999999999875321 12222222221 2334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChh----------------------------------hHHHHHH---H
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN----------------------------------IREGLLE---A 504 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~----------------------------------~r~~l~~---l 504 (773)
++|+|+||+||+++. ++.++|+|||++..+... .+..... .
T Consensus 122 ivHrDlkp~Nill~~--~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (376)
T cd05598 122 FIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRC 199 (376)
T ss_pred eEeCCCCHHHEEECC--CCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccc
Confidence 999999999999985 889999999997533100 0000000 0
Q ss_pred HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 505 FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 505 ~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
......+.+.++++++..-.......|++++...+++++
T Consensus 200 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000123566778888776655667789999987776654
No 59
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.50 E-value=1.5e-13 Score=149.00 Aligned_cols=185 Identities=14% Similarity=0.114 Sum_probs=118.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||+|+.++..... .+ ...++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~------~~~~~ 42 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------------------------------KD------EVAHT 42 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hH------HHHHH
Confidence 589999999999998 68999999985321000 00 01123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|.+.+..+. ++++.-..-+.......++||||++|++|.+..... ...+...+...+ +...+..+|..|+
T Consensus 43 ~~E~~~l~~l~-----hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i 116 (323)
T cd05595 43 VTESRVLQNTR-----HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDV 116 (323)
T ss_pred HHHHHHHHhCC-----CCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 34554444432 232221111223345679999999999997754321 223333333322 3344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++|+|||++......... .....+++.+++++...-+......|++++...++++
T Consensus 117 vH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 188 (323)
T cd05595 117 VYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred EecCCCHHHEEEcC--CCCEEecccHHhccccCCCCc------cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence 99999999999985 889999999988753221110 0112356667777777666666778999999877766
Q ss_pred HH
Q 004115 543 LN 544 (773)
Q Consensus 543 l~ 544 (773)
+.
T Consensus 189 l~ 190 (323)
T cd05595 189 MC 190 (323)
T ss_pred Hh
Confidence 53
No 60
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=4.2e-14 Score=147.62 Aligned_cols=184 Identities=17% Similarity=0.152 Sum_probs=128.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.||||.||++.. +|..||.|-..=| .+-..-+..+..|++
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~----------------------------------~md~k~rq~~v~Ei~ 70 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFG----------------------------------MMDAKARQDCVKEIS 70 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchh----------------------------------hccHHHHHHHHHHHH
Confidence 5799999999999997 8999999854211 111223345566777
Q ss_pred HHHHHH--HHHHHHH-hcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHHHH--HHH
Q 004115 384 YTQEAA--NAELFAS-NFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVES--YLE 455 (773)
Q Consensus 384 f~~EA~--Nl~rf~~-~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---~~~d~~~la~~li~~--~l~ 455 (773)
..+..+ |+.++.. .|.... .-..||||||+++.|+++.+.-+ .-+..+.+-..+++. .+.
T Consensus 71 lLkQL~HpNIVqYy~~~f~~~~------------evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 71 LLKQLNHPNIVQYYAHSFIEDN------------EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred HHHhcCCchHHHHHHHhhhccc------------hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 777665 6666654 333211 11579999999999999654211 112223333333332 244
Q ss_pred HHHh--CC--CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 456 QILS--HG--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 456 qI~~--~G--ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
.+|. .. ++|||+||+||+++. +|.++|-|||+.+.++.++. +.+-.-+.|.+|.++.+.-.-.....|
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvKLGDfGL~r~l~s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSD 210 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTA--NGVVKLGDFGLGRFLSSKTT------FAHSLVGTPYYMSPERIHESGYNFKSD 210 (375)
T ss_pred HHhccccccceeeccCcchheEEcC--CCceeeccchhHhHhcchhH------HHHhhcCCCcccCHHHHhcCCCCcchh
Confidence 4554 44 999999999999985 89999999999999987643 234456899999999998776788899
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++.-.++++-
T Consensus 211 iWslGCllyEMc 222 (375)
T KOG0591|consen 211 IWSLGCLLYEMC 222 (375)
T ss_pred HHHHHHHHHHHH
Confidence 999998776653
No 61
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.50 E-value=3.8e-13 Score=142.20 Aligned_cols=185 Identities=15% Similarity=0.111 Sum_probs=118.9
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||.|++|.||++.. +|+.||||+........ . ...-.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--------------------------------------~-~~~~~~~ 41 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK--------------------------------------R-KGYEGAM 41 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh--------------------------------------h-HHHHHHH
Confidence 68999999999998 68999999873211000 0 0001234
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l---~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.|.+.+.++. ++++....-+.+.....++||||++|++|.+.... .....+...+.... +...+..+|+.
T Consensus 42 ~E~~il~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 42 VEKRILAKVH-----SRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHhCC-----CCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 5555554442 23322211122334567999999999999875421 11223444333322 33447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+....... ....++..+++++...-+......|++++...++
T Consensus 117 ~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~ 188 (280)
T cd05608 117 RIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQSKT------KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLY 188 (280)
T ss_pred CcccCCCCHHHEEECC--CCCEEEeeCccceecCCCCccc------cccCCCcCccCHHHhcCCCCCccccHHHHHHHHH
Confidence 9999999999999985 7899999999998765432110 0123456677788777666667789999988777
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 189 el~~ 192 (280)
T cd05608 189 EMIA 192 (280)
T ss_pred HHHh
Confidence 6653
No 62
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.49 E-value=1.1e-13 Score=149.65 Aligned_cols=184 Identities=13% Similarity=0.088 Sum_probs=118.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||+|++|+||+|+. +|+.||||+.++..... . .....+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----------------------------~-----------~~~~~~ 42 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----------------------------K-----------DEVAHT 42 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------h-----------hHHHHH
Confidence 589999999999998 68999999984321000 0 001123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-CC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-HG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~-~G 461 (773)
..|.+.+..+ .++++.-...+.+.....+|||||++|++|.+.... ....+...+...+ +...+..+|. .|
T Consensus 43 ~~e~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ 116 (325)
T cd05594 43 LTENRVLQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKN 116 (325)
T ss_pred HHHHHHHHhC-----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444333 223332222233345567999999999999775432 1223433333322 3344788896 79
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-+......|++++...+++
T Consensus 117 ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05594 117 VVYRDLKLENLMLDK--DGHIKITDFGLCKEGIKDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 188 (325)
T ss_pred EEecCCCCCeEEECC--CCCEEEecCCCCeecCCCCcc------cccccCCcccCCHHHHccCCCCCccccccccceeee
Confidence 999999999999985 889999999998754322111 011235677788888766666777899998876665
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 189 l~ 190 (325)
T cd05594 189 MM 190 (325)
T ss_pred ec
Confidence 54
No 63
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.49 E-value=1.2e-13 Score=149.14 Aligned_cols=183 Identities=18% Similarity=0.167 Sum_probs=113.7
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|+||+|+. +|+.||||+........ . ..+.++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~------~~~~~~ 42 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK---------------------------------K------KEQNHI 42 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---------------------------------h------hHHHHH
Confidence 589999999999998 68999999874211000 0 001112
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~ 460 (773)
..|... +...+. ++++ ++++. +.....++||||++|++|.+.... ........+... .+...+..+|..
T Consensus 43 ~~e~~~---~l~~~~-h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~ 115 (321)
T cd05603 43 MAERNV---LLKNLK-HPFL--VGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSL 115 (321)
T ss_pred HHHHHH---HHHhCC-CCCc--cceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222211 111222 2322 22222 334567999999999999765432 122333332222 233447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||.||+++. +|.++|+|||++......... . ....+.+.+++++...-.......|++++...++
T Consensus 116 ~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~--~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 187 (321)
T cd05603 116 NIIYRDLKPENILLDS--QGHVVLTDFGLCKEGVEPEET--T----STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLY 187 (321)
T ss_pred CeEeccCCHHHeEECC--CCCEEEccCCCCccCCCCCCc--c----ccccCCcccCCHHHhcCCCCCCcCcccccchhhh
Confidence 9999999999999985 889999999998753221110 0 1123456677777776555667789999988777
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 188 el~ 190 (321)
T cd05603 188 EML 190 (321)
T ss_pred hhh
Confidence 665
No 64
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=2.7e-14 Score=160.02 Aligned_cols=188 Identities=19% Similarity=0.273 Sum_probs=129.3
Q ss_pred hCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 292 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 292 lG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
+..+++.+|.+. .-||-||||-||.|+. +.+.||||-+--.-. ...-.|.+
T Consensus 20 ~k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK-------------------------Qs~EKWqD 72 (948)
T KOG0577|consen 20 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-------------------------QSNEKWQD 72 (948)
T ss_pred ccCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccc-------------------------ccHHHHHH
Confidence 345778887654 4599999999999999 678999996621111 11123555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 449 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l 449 (773)
|+. |+.|.+. +.++..|-.-.+|-. .+..|||||||=| +-+|+......++...+||...
T Consensus 73 IlK--------EVrFL~~----------l~HPntieYkgCyLr-e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~ 132 (948)
T KOG0577|consen 73 ILK--------EVRFLRQ----------LRHPNTIEYKGCYLR-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAIT 132 (948)
T ss_pred HHH--------HHHHHHh----------ccCCCcccccceeec-cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHH
Confidence 444 3344433 223333333333432 2447999999988 5567666666666666776654
Q ss_pred --HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cC
Q 004115 450 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MG 524 (773)
Q Consensus 450 --i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG 524 (773)
+-..+..+|+++.+|||+|.||||+.+ .|.++|.|||.+...+|... +-+.|..|++..+- -|
T Consensus 133 ~gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAsi~~PAns----------FvGTPywMAPEVILAMDEG 200 (948)
T KOG0577|consen 133 HGALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSASIMAPANS----------FVGTPYWMAPEVILAMDEG 200 (948)
T ss_pred HHHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccchhhcCchhc----------ccCCccccchhHheecccc
Confidence 344588999999999999999999996 89999999999998888432 24677777776652 36
Q ss_pred CCCCCCChHHHHHH
Q 004115 525 VLVPTGDTTAVRRT 538 (773)
Q Consensus 525 ~~~~~~D~~~l~~~ 538 (773)
-....+|++++.-.
T Consensus 201 qYdgkvDvWSLGIT 214 (948)
T KOG0577|consen 201 QYDGKVDVWSLGIT 214 (948)
T ss_pred ccCCccceeeccch
Confidence 67778899888753
No 65
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.49 E-value=2.5e-13 Score=146.21 Aligned_cols=184 Identities=15% Similarity=0.128 Sum_probs=117.7
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||.|++|.||+|+. +|+.||||+.++.... .. .....+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----------------------------------~~-----~~~~~~~ 41 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----------------------------------SR-----SEVTHTL 41 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----------------------------------hh-----hHHHHHH
Confidence 68999999999998 5899999987421000 00 0011234
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCc
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 463 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gff 463 (773)
.|...+.++ ++++|.-..-+.......++||||++|++|.++... ....+.......+ +...+..+|..|++
T Consensus 42 ~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 115 (312)
T cd05585 42 AERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVI 115 (312)
T ss_pred HHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 455444443 223332211122334567999999999999876532 2223433333222 23447889999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
|+|+||.||+++. ++.++++|||++.......... ....+.+.++++++..-.......|++++...+.+++
T Consensus 116 HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 187 (312)
T cd05585 116 YRDLKPENILLDY--QGHIALCDFGLCKLNMKDDDKT------NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEML 187 (312)
T ss_pred eCCCCHHHeEECC--CCcEEEEECcccccCccCCCcc------ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHH
Confidence 9999999999985 8899999999987643321110 1123556677777776555667789999988777665
Q ss_pred H
Q 004115 544 N 544 (773)
Q Consensus 544 ~ 544 (773)
.
T Consensus 188 t 188 (312)
T cd05585 188 T 188 (312)
T ss_pred h
Confidence 3
No 66
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.49 E-value=2.8e-13 Score=146.31 Aligned_cols=184 Identities=19% Similarity=0.165 Sum_probs=117.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||||+.++..... ++-.. .+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~~------~~ 42 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI---------------------------------DDDVE------CT 42 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------cchHH------HH
Confidence 589999999999999 68999999885421100 00000 11
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|.+.+... . ++++ +++++. +.....++||||++|++|.+.... ....+.......+ +...+..+|..
T Consensus 43 ~~e~~~l~~~---~-~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~ 115 (316)
T cd05620 43 MVEKRVLALA---W-ENPF--LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSK 115 (316)
T ss_pred HHHHHHHHhc---c-CCCC--ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2233222211 1 2233 333332 334567999999999999875432 2223433333322 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||+||+++. ++.++++|||++......... .....++..++++++..-+...+..|++++...+.
T Consensus 116 ~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (316)
T cd05620 116 GIIYRDLKLDNVMLDR--DGHIKIADFGMCKENVFGDNR------ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLY 187 (316)
T ss_pred CeEecCCCHHHeEECC--CCCEEeCccCCCeecccCCCc------eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHH
Confidence 9999999999999985 789999999998753211110 01123566778888877666677889999998877
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 188 el~~ 191 (316)
T cd05620 188 EMLI 191 (316)
T ss_pred HHHh
Confidence 7653
No 67
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.49 E-value=8e-14 Score=151.53 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=121.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+.+..... . .+. .-.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----------------~-----------------~~~------~~~ 47 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI----------------K-----------------RNQ------IAH 47 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh----------------h-----------------ccH------HHH
Confidence 5799999999999999 5999999997421100 0 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+..+. ++++.-..-+.......++||||++|++|.++.... ...+...+...+ +...+..+|..|
T Consensus 48 ~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 121 (350)
T cd05573 48 VRAERDILADAD-----SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG 121 (350)
T ss_pred HHHHHHHHHhcC-----CCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 333443333332 222211111122345679999999999998865322 233333332222 334478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-----------------------HHHHHHHhhcCHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------------------LEAFYGIYEKDADKVLQ 518 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l-----------------------~~l~~al~~~D~~~i~~ 518 (773)
++|+|+||.||+++. ++.++|+|||++..+........ .........+++.++++
T Consensus 122 iiH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (350)
T cd05573 122 FIHRDIKPDNILIDA--DGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAP 199 (350)
T ss_pred eeccCCCHHHeEECC--CCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCH
Confidence 999999999999985 88999999999987765430000 00001122456777888
Q ss_pred HHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 519 AMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 519 ~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
++..-+...+..|++++...+.+++
T Consensus 200 E~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 200 EVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred HHHcCCCCCCceeeEecchhhhhhc
Confidence 8877666677889999988777665
No 68
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.49 E-value=2.1e-13 Score=145.47 Aligned_cols=180 Identities=16% Similarity=0.171 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|+||+|.. +|+.||||+.+-... ..+-.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------------------------------------------~~~~~ 63 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ------------------------------------------QRREL 63 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch------------------------------------------hHHHH
Confidence 4699999999999998 689999997521100 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|...+..+. + ++ +.....+ ......+++|||++|.++.++... ...+...+...+ +-..+..+|..
T Consensus 64 ~~~e~~~l~~l~----h-~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~ 135 (292)
T cd06657 64 LFNEVVIMRDYQ----H-ENVVEMYNSY-LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQ 135 (292)
T ss_pred HHHHHHHHHhcC----C-cchhheeeEE-EeCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 444544444332 2 22 2222222 234567999999999999886432 223333333322 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++++|||++..+....... ....+...++.++...-+...+..|.+++...+.
T Consensus 136 givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~ 207 (292)
T cd06657 136 GVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207 (292)
T ss_pred CeecCCCCHHHEEECC--CCCEEEcccccceecccccccc------cccccCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence 9999999999999985 7899999999988775433211 1112344456666665555566789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 208 el~ 210 (292)
T cd06657 208 EMV 210 (292)
T ss_pred HHH
Confidence 654
No 69
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.49 E-value=1.9e-13 Score=148.52 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=118.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+....- .... .....
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~----------------------------------~~~~-----~~~~~ 47 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWE----------------------------------MLKR-----AETAC 47 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH----------------------------------HHhh-----HHHHH
Confidence 6799999999999998 58899999873110 0000 00111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+..|...+... +++.+....-+.+.....++||||++|++|.++.......++....... -+...++.+|..|
T Consensus 48 ~~~e~~~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~ 122 (331)
T cd05624 48 FREERNVLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH 122 (331)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333222221 2233322222223345679999999999999875432223333322222 2334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVR 536 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~~~~D~~~l~ 536 (773)
++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.++++++..- +......|++++.
T Consensus 123 iiHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlG 195 (331)
T cd05624 123 YVHRDIKPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 195 (331)
T ss_pred eeeccCchHHEEEcC--CCCEEEEeccceeeccCCCcee-----eccccCCcccCCHHHHhccccCCCCCCCcccEEeee
Confidence 999999999999985 7899999999998775432210 011235666777776653 4455678999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+++++.
T Consensus 196 vil~ell~ 203 (331)
T cd05624 196 VCMYEMLY 203 (331)
T ss_pred hhhhhhhh
Confidence 87776653
No 70
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.49 E-value=3.9e-13 Score=147.33 Aligned_cols=189 Identities=14% Similarity=0.075 Sum_probs=122.7
Q ss_pred hhccC-cccccccceeEEEEEee--c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 300 FERFD-VEPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 300 F~~fd-~~PIgsaSiGQVhrA~l--~-G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
++.|. .+.||+|++|.||+|++ + +..||||+....... -.+.
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~---------------------------------~~~~- 74 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII---------------------------------KQKQ- 74 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh---------------------------------hhhh-
Confidence 34454 37899999999999987 2 368999986311000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHH
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESY 453 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~ 453 (773)
.-.+..|.+.+..+. ++++.-..-+.......++||||++|++|.++.... ...+....... .+...
T Consensus 75 -----~~~~~~E~~~l~~l~-----hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 75 -----VDHVFSERKILNYIN-----HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred -----HHHHHHHHHHHHhCC-----CCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHH
Confidence 012445555554442 233322222223345579999999999998865322 22333322222 23344
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|..|++|+|+||+||+++. ++.++|+|||++..++.... -..+.+.+++++...........|.+
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~--~~~ikL~DFG~a~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~Diw 212 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDK--DGFIKMTDFGFAKVVDTRTY---------TLCGTPEYIAPEILLNVGHGKAADWW 212 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECC--CCCEEEecCCCCeecCCCcc---------eecCChhhcCHHHHhCCCCCcccccc
Confidence 78899999999999999999985 89999999999988764321 12456778888887665566778999
Q ss_pred HHHHHHHHHHH
Q 004115 534 AVRRTAQFFLN 544 (773)
Q Consensus 534 ~l~~~i~~~l~ 544 (773)
++...+++++.
T Consensus 213 SlGvil~ell~ 223 (340)
T PTZ00426 213 TLGIFIYEILV 223 (340)
T ss_pred chhhHHHHHhc
Confidence 99887776653
No 71
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.48 E-value=1.8e-14 Score=151.07 Aligned_cols=194 Identities=19% Similarity=0.284 Sum_probs=137.2
Q ss_pred HHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004115 283 TAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 360 (773)
Q Consensus 283 ~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~ 360 (773)
+..+.=+..|.++++++|+-.. .+|.||+|.||+|.+ +|+.||||-.. ++.
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V~s------------------- 70 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------VDT------------------- 70 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------ccc-------------------
Confidence 4455566788999999987655 599999999999999 69999999551 122
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeecc--CCCeEEEEeecCCCChhhhhhhhhc
Q 004115 361 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDEL 438 (773)
Q Consensus 361 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~--st~~vLVMEyieG~~L~d~~~l~~~ 438 (773)
|+.+|+.|+. +.+++| . -+|-+.|..| .+..++|||||..++++|+..++..
T Consensus 71 -----DLQEIIKEIS--IMQQC~-----------------S--~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K 124 (502)
T KOG0574|consen 71 -----DLQEIIKEIS--IMQQCK-----------------S--KYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK 124 (502)
T ss_pred -----hHHHHHHHHH--HHHHcC-----------------C--chhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC
Confidence 4444444432 111211 1 1222223222 3678999999999999999888887
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHH
Q 004115 439 GVDRKRLGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKV 516 (773)
Q Consensus 439 ~~d~~~la~~li~~~--l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i 516 (773)
.+...+++..+-..+ ++.+|...-+|||+|.||||++. +|..+|.|||.+|++++.+... ..+-+.+-.|
T Consensus 125 ~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQLTDTMAKR------NTVIGTPFWM 196 (502)
T KOG0574|consen 125 PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQLTDTMAKR------NTVIGTPFWM 196 (502)
T ss_pred CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchhhhhHHhh------CccccCcccc
Confidence 788888877664443 77788888899999999999985 8999999999999998865321 1233566677
Q ss_pred HHHHHH-cCCCCCCCChHHHHHH
Q 004115 517 LQAMVQ-MGVLVPTGDTTAVRRT 538 (773)
Q Consensus 517 ~~~l~~-lG~~~~~~D~~~l~~~ 538 (773)
+++.++ .|+ ....|.+++.-.
T Consensus 197 APEVI~EIGY-~~~ADIWSLGIT 218 (502)
T KOG0574|consen 197 APEVIEEIGY-DTKADIWSLGIT 218 (502)
T ss_pred cHHHHHHhcc-chhhhHhhhcch
Confidence 766654 465 344677777643
No 72
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.48 E-value=2.8e-13 Score=147.24 Aligned_cols=187 Identities=15% Similarity=0.102 Sum_probs=118.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||+|+.+...... .+... .
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~ 41 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND---------------------------------DEDID------W 41 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc---------------------------------hhHHH------H
Confidence 3689999999999998 58999999884321100 00000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+.+. .+++++.-..-+....+..++||||++|++|.+.... ....+...+...+ +...+..+|..|
T Consensus 42 ~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ 116 (329)
T cd05618 42 VQTEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERG 116 (329)
T ss_pred HHHHHHHHHhc----CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233222221 1233332222222345667999999999999775422 2233333333222 334478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-+......|++++...+++
T Consensus 117 ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (329)
T cd05618 117 IIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDT------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred eeeCCCCHHHEEECC--CCCEEEeeCCccccccCCCCc------cccccCCccccCHHHHcCCCCCCccceecccHHHHH
Confidence 999999999999985 889999999998754221110 011235667778887776666677899999988777
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 189 l~~ 191 (329)
T cd05618 189 MMA 191 (329)
T ss_pred Hhh
Confidence 654
No 73
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.48 E-value=3.7e-13 Score=146.21 Aligned_cols=183 Identities=15% Similarity=0.121 Sum_probs=117.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||||+.++..... .+... .+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~---------------------------------~~~~~------~~ 42 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND---------------------------------DEDID------WV 42 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------HH
Confidence 589999999999998 68999999985321100 00000 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|...+..+ .++++| +.++. +.....+|||||++|++|.++... ...+....+...+ +...+..+|..
T Consensus 43 ~~e~~il~~~----~~hp~I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~ 115 (329)
T cd05588 43 QTEKHVFETA----SNHPFL--VGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHER 115 (329)
T ss_pred HHHHHHHHhc----cCCCCC--CceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2333322222 233433 22332 334567999999999999775422 2233433333322 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceecc-ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI-SPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L-s~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
|++|+|+||.||+++. ++.++|+|||++... .+.... ....++..++++++..-+......|.+++...+
T Consensus 116 ~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 186 (329)
T cd05588 116 GIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRPGDTT-------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 186 (329)
T ss_pred CeEecCCCHHHeEECC--CCCEEECcCccccccccCCCcc-------ccccCCccccCHHHHcCCCCCCccceechHHHH
Confidence 9999999999999985 789999999998753 221110 112356677788877766666778999999887
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
++++.
T Consensus 187 ~el~~ 191 (329)
T cd05588 187 FEMMA 191 (329)
T ss_pred HHHHH
Confidence 77653
No 74
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.48 E-value=1.6e-13 Score=149.24 Aligned_cols=198 Identities=20% Similarity=0.216 Sum_probs=121.9
Q ss_pred HHHhCCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 004115 289 EEELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKR 365 (773)
Q Consensus 289 e~elG~~~~eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~ 365 (773)
+.|++....++.+.|.. ++||+|++|+||+|.. +|+.||||+.........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------- 56 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI-------------------------- 56 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH--------------------------
Confidence 45566555556666654 7999999999999998 688999998743211100
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceee-----eccCCCeEEEEeecCCCChhhhhhhhhcCC
Q 004115 366 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIF-----WEYTTPQILTMEYVPGIKINRIQSLDELGV 440 (773)
Q Consensus 366 d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~-----~e~st~~vLVMEyieG~~L~d~~~l~~~~~ 440 (773)
..-.+.+|.+.+.++.+ ..-+.+..++ .+.....+++||++ |.++.++... ...
T Consensus 57 --------------~~~~~~~E~~~l~~l~h----~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l 115 (343)
T cd07878 57 --------------HARRTYRELRLLKHMKH----ENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC--QKL 115 (343)
T ss_pred --------------HHHHHHHHHHHHHhcCC----CchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc--CCC
Confidence 00012233333333321 1111111111 12234568999998 6677776432 234
Q ss_pred CHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004115 441 DRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 518 (773)
Q Consensus 441 d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~ 518 (773)
+...+...+ +...+..+|..|++|+|+||+||+++. ++.++|+|||++..++..... ..+...++++
T Consensus 116 ~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~t~~y~aP 184 (343)
T cd07878 116 SDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADDEMTG---------YVATRWYRAP 184 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEEEcCCccceecCCCcCC---------ccccccccCc
Confidence 443333332 233477899999999999999999985 889999999999887653211 1234455666
Q ss_pred HHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004115 519 AMVQM-GVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 519 ~l~~l-G~~~~~~D~~~l~~~i~~~l~ 544 (773)
++..- .......|++++...+++++.
T Consensus 185 E~~~~~~~~~~~~DiwslG~il~el~~ 211 (343)
T cd07878 185 EIMLNWMHYNQTVDIWSVGCIMAELLK 211 (343)
T ss_pred hHhcCCccCCchhhhHhHHHHHHHHHH
Confidence 65533 334566899999988777654
No 75
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.48 E-value=3.8e-13 Score=145.56 Aligned_cols=185 Identities=17% Similarity=0.092 Sum_probs=117.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+.+++.... . ++ .-.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-------------------~-------------~~-------~~~ 46 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-------------------D-------------DD-------VEC 46 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-------------------h-------------hH-------HHH
Confidence 6799999999999998 57899999985321100 0 00 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|.+.+..+. +++. ++..+. ......++||||++|++|.+..... ...........+ +...+..+|.
T Consensus 47 ~~~e~~~l~~~~----~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05587 47 TMVEKRVLALPG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHS 119 (324)
T ss_pred HHHHHHHHHhcC----CCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 334444443332 2222 233322 2345679999999999998764321 223333333222 2344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|+||.||+++. ++.++|+|||++......... .....+...++++++...+......|++++...+
T Consensus 120 ~~ivH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (324)
T cd05587 120 KGIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 191 (324)
T ss_pred CCeEecCCCHHHeEEcC--CCCEEEeecCcceecCCCCCc------eeeecCCccccChhhhcCCCCCcccchhhhHHHH
Confidence 99999999999999985 789999999998753211110 0112345667778877666666778999999877
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 192 ~ellt 196 (324)
T cd05587 192 YEMLA 196 (324)
T ss_pred HHHHh
Confidence 76653
No 76
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.48 E-value=3.9e-13 Score=146.16 Aligned_cols=185 Identities=17% Similarity=0.216 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||||+.+..- . .. ..... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~---------~~-----------------~~~~~------~ 47 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-------M---------LK-----------------RAETA------C 47 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-------H---------hh-----------------hhhHH------H
Confidence 6799999999999998 58999999874210 0 00 00001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
|..|...+..+ ++++ ++.++. +.....++||||++|++|.++............+...+ +...+..+|.
T Consensus 48 ~~~e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 48 FREERDVLVNG-----DRRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred HHHHHHHHHhC-----CCCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23333333222 2232 222322 23455799999999999988754222223333322222 3345788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTA 534 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~~~~D~~~ 534 (773)
.|++|+|+||.||+++. ++.++|+|||++..+.......- ....+.+.++++++... +......|+++
T Consensus 121 ~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws 193 (331)
T cd05597 121 LGYVHRDIKPDNVLLDK--NGHIRLADFGSCLRLLADGTVQS-----NVAVGTPDYISPEILQAMEDGKGRYGPECDWWS 193 (331)
T ss_pred CCeEECCCCHHHEEECC--CCCEEEEECCceeecCCCCCccc-----cceeccccccCHHHHhhccccccCCCCcceeeh
Confidence 99999999999999975 88999999999877654321100 11234556777776652 34456689999
Q ss_pred HHHHHHHHH
Q 004115 535 VRRTAQFFL 543 (773)
Q Consensus 535 l~~~i~~~l 543 (773)
+...+.+++
T Consensus 194 lG~~l~el~ 202 (331)
T cd05597 194 LGVCMYEML 202 (331)
T ss_pred hhhHHHHHh
Confidence 988777665
No 77
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=1.5e-13 Score=152.52 Aligned_cols=186 Identities=16% Similarity=0.137 Sum_probs=130.1
Q ss_pred hccCc-ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 301 ERFDV-EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 301 ~~fd~-~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..|++ .-||.|+||.||+|.+ +|+.||||...++... .
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~---------------------------------------~- 114 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ---------------------------------------G- 114 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc---------------------------------------c-
Confidence 46765 7899999999999999 6799999966432211 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCC-CeEEEEeecCCCChhhhhhhhhc-CCC---HHHHHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDEL-GVD---RKRLGRYAVESY 453 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st-~~vLVMEyieG~~L~d~~~l~~~-~~d---~~~la~~li~~~ 453 (773)
+.+|.+|...+.++++ +++.--.-|..... +.+||.||++.++|.+....... .++ |-+||.-.+ ..
T Consensus 115 --~~eF~~Ei~~ls~l~H-----~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A-~g 186 (361)
T KOG1187|consen 115 --EREFLNEVEILSRLRH-----PNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAA-RG 186 (361)
T ss_pred --hhHHHHHHHHHhcCCC-----cCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHH-HH
Confidence 2247778777776643 33322222222223 48999999999999987544332 333 234443333 33
Q ss_pred HHHHHhCC---CccCCCCCCceEEeccCCCcEEEEeecceeccCh-hhHHHHHHHHHHHh-hcCHHHHHHHHHHcCCCCC
Q 004115 454 LEQILSHG---FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP-NIREGLLEAFYGIY-EKDADKVLQAMVQMGVLVP 528 (773)
Q Consensus 454 l~qI~~~G---ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~-~~r~~l~~l~~al~-~~D~~~i~~~l~~lG~~~~ 528 (773)
+..+|... ++|+|+||.|||++. +...++.|||++...+. .... ... .++..++++++...|.++.
T Consensus 187 L~yLH~~~~~~iiHrDiKssNILLD~--~~~aKlsDFGLa~~~~~~~~~~-------~~~~~gt~gY~~PEy~~~g~lt~ 257 (361)
T KOG1187|consen 187 LAYLHEGCPPPIIHRDIKSSNILLDE--DFNAKLSDFGLAKLGPEGDTSV-------STTVMGTFGYLAPEYASTGKLTE 257 (361)
T ss_pred HHHHccCCCCCEecCCCCHHHeeECC--CCCEEccCccCcccCCccccce-------eeecCCCCccCChhhhccCCcCc
Confidence 78888644 999999999999985 89999999999966654 2211 001 5777889999999999999
Q ss_pred CCChHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFL 543 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l 543 (773)
..|++++...+.+++
T Consensus 258 KsDVySFGVvllEli 272 (361)
T KOG1187|consen 258 KSDVYSFGVVLLELI 272 (361)
T ss_pred ccccccchHHHHHHH
Confidence 999999998766554
No 78
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.48 E-value=3.7e-13 Score=146.09 Aligned_cols=184 Identities=17% Similarity=0.110 Sum_probs=117.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|+||+|.. +|+.||||+.+...... .+... .+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~~ 42 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD---------------------------------DEDID------WV 42 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------HH
Confidence 589999999999998 58999999985321100 00001 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|...+.++ .+++. ++.++. +.....++||||++|++|.+..... ...+...+...+ +...+..+|..
T Consensus 43 ~~e~~~~~~~----~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~ 115 (327)
T cd05617 43 QTEKHVFEQA----SSNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHER 115 (327)
T ss_pred HHHHHHHHhh----cCCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3343333332 22333 233332 3345679999999999998754321 223333332222 22447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||.||+++. ++.++|+|||++.......... ....+.+.++++++..-+......|++++...++
T Consensus 116 ~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (327)
T cd05617 116 GIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGLGPGDTT------STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMF 187 (327)
T ss_pred CeeccCCCHHHEEEeC--CCCEEEeccccceeccCCCCce------ecccCCcccCCHHHHCCCCCCchheeehhHHHHH
Confidence 9999999999999986 8899999999987532211100 1123566677777776666667789999998877
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 188 ell~ 191 (327)
T cd05617 188 EMMA 191 (327)
T ss_pred HHHh
Confidence 7653
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.47 E-value=3.5e-13 Score=145.97 Aligned_cols=189 Identities=14% Similarity=0.121 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||+|++|.||+|+. +|+.||+|+.+...... ....
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--------------------------------------~~~~ 47 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ--------------------------------------KAKT 47 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh--------------------------------------hhhH
Confidence 5799999999999986 47899999874211000 0000
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.-.+..|...+.++ .+++++....-+.+.....+++|||++|++|.+.... ...+....+...+ +...+..+|
T Consensus 48 ~~~~~~e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH 122 (332)
T cd05614 48 VEHTRTERNVLEHV----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLH 122 (332)
T ss_pred HHHHHHHHHHHHhc----cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01233444434333 2334333222222334567999999999999876432 2233444333332 334478899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 537 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~ 537 (773)
..|++|+|+||.||+++. ++.++|+|||++..+........ ....+...+++++++.-. ......|++++..
T Consensus 123 ~~~ivHrDlkp~Nili~~--~~~~kl~DfG~~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 195 (332)
T cd05614 123 KLGIVYRDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERT-----YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI 195 (332)
T ss_pred HCCcEecCCCHHHeEECC--CCCEEEeeCcCCccccccCCCcc-----ccccCCccccCHHHhcCCCCCCCccccccchh
Confidence 999999999999999985 78999999999886543221111 012356677777776532 2455689999988
Q ss_pred HHHHHHH
Q 004115 538 TAQFFLN 544 (773)
Q Consensus 538 ~i~~~l~ 544 (773)
.+.+++.
T Consensus 196 il~ellt 202 (332)
T cd05614 196 LIFELLT 202 (332)
T ss_pred hhhhhhc
Confidence 7776653
No 80
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.47 E-value=2.7e-13 Score=140.85 Aligned_cols=184 Identities=20% Similarity=0.228 Sum_probs=121.2
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+-+|.|.+|.||+|+. +|+.||||-.+.+-.+ +.+..+..+|+
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k----------------------------------dGi~~talREI 52 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK----------------------------------DGINRTALREI 52 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc----------------------------------cCccHHHHHHH
Confidence 35799999999999999 7999999988655211 11234556777
Q ss_pred HHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHH
Q 004115 383 DYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQIL 458 (773)
Q Consensus 383 Df~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~--~l~qI~ 458 (773)
.+.+|.+ |+-.+.+.|.+ .+...||.||++- +|..+......-+.+..+-...... -+..+|
T Consensus 53 K~Lqel~h~nIi~LiD~F~~-------------~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H 118 (318)
T KOG0659|consen 53 KLLQELKHPNIIELIDVFPH-------------KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH 118 (318)
T ss_pred HHHHHccCcchhhhhhhccC-------------CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH
Confidence 7777764 55555554433 3456899999984 4555444333344555544433332 367789
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
++.++|||+||.|+|++. +|.+++.|||+++.+.+..+...-+ ++.+=| ..-+.+...--....+|++++.-.
T Consensus 119 ~~~IlHRDlKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~~~~----V~TRWY-RAPELLfGsr~Yg~~VDmWavGCI 191 (318)
T KOG0659|consen 119 SKWILHRDLKPNNLLISS--DGQLKIADFGLARFFGSPNRIQTHQ----VVTRWY-RAPELLFGSRQYGTGVDMWAVGCI 191 (318)
T ss_pred hhhhhcccCCccceEEcC--CCcEEeecccchhccCCCCcccccc----eeeeec-cChHHhccchhcCCcchhhhHHHH
Confidence 999999999999999996 9999999999999998766543322 122111 112222222233456788888877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 192 ~AELl 196 (318)
T KOG0659|consen 192 FAELL 196 (318)
T ss_pred HHHHH
Confidence 66554
No 81
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.47 E-value=2.4e-13 Score=147.14 Aligned_cols=187 Identities=14% Similarity=0.057 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||||+.++..... .+..+ .
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~ 45 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA---------------------------------RDEVE------S 45 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------H
Confidence 5799999999999998 68999999985321000 00000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|.+-+.... .+ .++++.-..-+.+.....++||||++|++|..... ...++...+...+ +-..+..+|..|
T Consensus 46 l~~e~~~~~~~~-~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05589 46 LMCEKRIFETAN-SE-RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENK 121 (324)
T ss_pred HHHHHHHHHhcc-cc-CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 222332222221 12 22332222222234556799999999999876542 2234444433332 223478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++.......... ....+.+.++++++..-+......|.+++...+.+
T Consensus 122 ivHrdlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e 193 (324)
T cd05589 122 IVYRDLKLDNLLLDT--EGFVKIADFGLCKEGMGFGDRT------STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYE 193 (324)
T ss_pred eEecCCCHHHeEECC--CCcEEeCcccCCccCCCCCCcc------cccccCccccCHhHhcCCCCCcccchhhHHHHHHH
Confidence 999999999999985 8899999999987543221110 11235667778887766556677899999887776
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 194 l~ 195 (324)
T cd05589 194 ML 195 (324)
T ss_pred HH
Confidence 65
No 82
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.47 E-value=3.4e-13 Score=145.99 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||+|++|.||+|+. .|+.||||+.+..... .....
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~--------------------------------------~~~~~ 43 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV--------------------------------------RNQKD 43 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH--------------------------------------hhhhh
Confidence 4699999999999986 3789999987421000 00001
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
...+..|...+..+. +++|. +-..+ +.....++||||++|++|.+..... .......+...+ +...+..+
T Consensus 44 ~~~~~~E~~il~~l~-----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 116 (323)
T cd05584 44 TAHTKAERNILEAVK-----HPFIVDLIYAF-QTGGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHL 116 (323)
T ss_pred HHHHHHHHHHHHhCC-----CCchhceeeEE-ecCCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 123445555555542 23322 22222 3345679999999999998764322 122222222222 33457889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-.......|++++..
T Consensus 117 H~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 188 (323)
T cd05584 117 HQQGIIYRDLKPENILLDA--QGHVKLTDFGLCKESIHEGTV------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGA 188 (323)
T ss_pred HHCCeecCCCCHHHeEECC--CCCEEEeeCcCCeecccCCCc------ccccCCCccccChhhccCCCCCCcceecccHH
Confidence 9999999999999999985 889999999998754322111 01123556677777766555566789999988
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+++++
T Consensus 189 il~ell 194 (323)
T cd05584 189 LMYDML 194 (323)
T ss_pred HHHHHh
Confidence 776665
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.47 E-value=3e-13 Score=148.24 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=115.8
Q ss_pred hhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004115 300 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 376 (773)
Q Consensus 300 F~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 376 (773)
+.+++. +.||.|++|.||+|+. +|+.||||+......+. ...
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~ 117 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDT-----------------------------------VRR 117 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHH-----------------------------------HHH
Confidence 344443 6799999999999998 68999999874322111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHH
Q 004115 377 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQ 456 (773)
Q Consensus 377 ~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~q 456 (773)
++.+|++.+.++. +++|.-..-+.+.....+++|||++|++|.+...... .....++..+ ...+..
T Consensus 118 ------~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~i~~qi-~~aL~~ 183 (353)
T PLN00034 118 ------QICREIEILRDVN-----HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADE--QFLADVARQI-LSGIAY 183 (353)
T ss_pred ------HHHHHHHHHHhCC-----CCCcceeeeEeccCCeEEEEEecCCCCcccccccCCH--HHHHHHHHHH-HHHHHH
Confidence 2344555444432 2332222222244566799999999998865321110 0111233322 234788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----CCCCCCC
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----VLVPTGD 531 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-----~~~~~~D 531 (773)
+|..|++|+|+||.||++++ ++.++|+|||++..+....... ....+...+++++++... ......|
T Consensus 184 LH~~~ivHrDlkp~NIll~~--~~~~kL~DfG~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~D 255 (353)
T PLN00034 184 LHRRHIVHRDIKPSNLLINS--AKNVKIADFGVSRILAQTMDPC------NSSVGTIAYMSPERINTDLNHGAYDGYAGD 255 (353)
T ss_pred HHHCCEeecCCCHHHEEEcC--CCCEEEcccccceecccccccc------cccccCccccCccccccccccCcCCCcchh
Confidence 99999999999999999985 7899999999988765432110 011245556666654321 1223579
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 256 vwslGvil~el~ 267 (353)
T PLN00034 256 IWSLGVSILEFY 267 (353)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 84
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.47 E-value=4.9e-13 Score=148.29 Aligned_cols=139 Identities=15% Similarity=0.146 Sum_probs=95.9
Q ss_pred cccccccceeEEEEEee---cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l---~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
.+.||+|+||+||+|++ +|+.||||+..+..... . . +. ..
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~---------------------------~-~---~~------~~ 65 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW---------------------------S-K---PL------AR 65 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc---------------------------c-c---HH------HH
Confidence 36799999999999987 47788999864321100 0 0 00 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG 461 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~G 461 (773)
-.|.+|++.+.++.+ +++ +|.++. ....+|||||++|.+|.... .. ....+... +...+.++|..|
T Consensus 66 ~~~~~E~~iL~~L~h-----~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~~---~~--~~~~~~~~-i~~aL~~lH~~g 131 (365)
T PRK09188 66 HLAAREIRALKTVRG-----IGV-VPQLLA--TGKDGLVRGWTEGVPLHLAR---PH--GDPAWFRS-AHRALRDLHRAG 131 (365)
T ss_pred HHHHHHHHHHHhccC-----CCC-CcEEEE--cCCcEEEEEccCCCCHHHhC---cc--chHHHHHH-HHHHHHHHHHCC
Confidence 236777777776642 233 456664 35689999999999886421 11 11233333 335688899999
Q ss_pred CccCCC-CCCceEEeccCCCcEEEEeecceeccChh
Q 004115 462 FFHADP-HPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 462 ffHaDp-HPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
++|+|+ ||+||+++. +++++|+|||++..+.+.
T Consensus 132 IiHrDL~KP~NILv~~--~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 132 ITHNDLAKPQNWLMGP--DGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CeeCCCCCcceEEEcC--CCCEEEEECccceecccC
Confidence 999999 899999974 789999999999988654
No 85
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.46 E-value=2.4e-13 Score=150.56 Aligned_cols=190 Identities=15% Similarity=0.167 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+.+..- . ...+.. -.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-------~--------------------------~~~~~~------~~ 47 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-------V--------------------------LLRNQV------AH 47 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-------h--------------------------hhHHHH------HH
Confidence 6799999999999998 68999999873210 0 000011 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+.++. +++ +++++. ......+|||||++|++|.++.... .......+...+ +...+..+|.
T Consensus 48 ~~~E~~il~~~~-----h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~ 119 (382)
T cd05625 48 VKAERDILAEAD-----NEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHK 119 (382)
T ss_pred HHHHHHHHHhCC-----CCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 334444443332 232 233332 2234579999999999998864321 122322222222 3345788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhH--------------------------------------HHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR--------------------------------------EGL 501 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r--------------------------------------~~l 501 (773)
.|++|+|+||.||+++. +|.++|+|||++..+..... ...
T Consensus 120 ~~ivHrDlKp~NILl~~--~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (382)
T cd05625 120 MGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAA 197 (382)
T ss_pred CCeecCCCCHHHEEECC--CCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 99999999999999985 89999999999754321000 000
Q ss_pred H---HHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 502 L---EAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 502 ~---~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
. .....-..+.+.+++++++.-.......|++++...+++++.
T Consensus 198 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ellt 243 (382)
T cd05625 198 RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 243 (382)
T ss_pred cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHh
Confidence 0 000001134566778887765555677899999988776653
No 86
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.46 E-value=3.4e-13 Score=149.09 Aligned_cols=189 Identities=16% Similarity=0.192 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+....- . .. .+... .
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-------~---------~~-----------------~~~~~------~ 47 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE-------M---------FK-----------------KDQLA------H 47 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-------H---------HH-----------------hHHHH------H
Confidence 6799999999999998 68999999873210 0 00 00001 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
+.+|.+.+.++ ++++ +++++. ......+|||||++|++|.++... ...+....+... .+...+..+|.
T Consensus 48 ~~~E~~il~~l-----~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~ 119 (377)
T cd05629 48 VKAERDVLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHK 119 (377)
T ss_pred HHHHHHHHHhC-----CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33444444332 2233 333332 334567999999999999886432 122333222222 22344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-HHHH---------------------------------
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEAF--------------------------------- 505 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l-~~l~--------------------------------- 505 (773)
.|++|+|+||.||+++. ++.++++|||++..+........ ..+.
T Consensus 120 ~givHrDlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T cd05629 120 LGFIHRDIKPDNILIDR--GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATW 197 (377)
T ss_pred CCeeccCCCHHHEEECC--CCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 99999999999999985 88999999999864432110000 0000
Q ss_pred -------HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 506 -------YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 506 -------~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
..-..+.+.+++++++.-.......|++++...+++++
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 242 (377)
T cd05629 198 KKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECL 242 (377)
T ss_pred hhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhh
Confidence 00012566678888776555667789999988776665
No 87
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.46 E-value=1.1e-12 Score=144.83 Aligned_cols=202 Identities=19% Similarity=0.148 Sum_probs=124.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc-cchHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK-RDWVAIYDECASVLYQEI 382 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~-~d~~~i~~E~~~~l~~El 382 (773)
.-||+|++|.|-.|+. +|+.|||||...--. .. +...+...... ..+.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~------------~~---~~~~~~~~a~~~~~~e-------------- 153 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKEL------------RR---QYGFPRQPAMKLMPIE-------------- 153 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhh------------hh---hcccccccccccCcHH--------------
Confidence 5699999999999998 799999999832100 00 00111100000 0111
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeec-cCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWE-YTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~l~qI~~~ 460 (773)
+.++|..-+.++.+ ..-|..-+|+.+ .+++.|||.|||..+.+........ ...+..+..-+-+-..|+++|.+
T Consensus 154 kv~~EIailKkl~H----~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q 229 (576)
T KOG0585|consen 154 KVRREIAILKKLHH----PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ 229 (576)
T ss_pred HHHHHHHHHHhcCC----cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc
Confidence 23455555655533 222344445443 3567799999999998876432211 11111121222233448889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC----CCCCCChHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV----LVPTGDTTAVR 536 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~----~~~~~D~~~l~ 536 (773)
|++|||+||.|+|+.. +|++++.|||.+-..+...-+..-+.+ .-.-+.+..+++++...|- .....|.+++.
T Consensus 230 giiHRDIKPsNLLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L-~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG 306 (576)
T KOG0585|consen 230 GIIHRDIKPSNLLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQL-SRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG 306 (576)
T ss_pred CeeccccchhheEEcC--CCcEEeeccceeeecccCCccccHHHH-hhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence 9999999999999986 899999999988866322111111111 1156889999999887643 22346999999
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..++-|+
T Consensus 307 VTLYCll 313 (576)
T KOG0585|consen 307 VTLYCLL 313 (576)
T ss_pred hhHHHhh
Confidence 8887765
No 88
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.46 E-value=5.7e-13 Score=144.71 Aligned_cols=180 Identities=17% Similarity=0.197 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|..||+|+.+...... ... +
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 49 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPA-----------------------------------IRN------Q 49 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHH-----------------------------------HHH------H
Confidence 6799999999999999 58999999885432111 111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS- 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~- 459 (773)
+.+|.+.+.++. ++++ .+..++ ......++||||++|++|.++.... ...+...+.... +...+..+|.
T Consensus 50 ~~~E~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 50 IIRELQVLHECN-----SPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred HHHHHHHHHHCC-----CCCCCeEEEEE-EECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 344444444432 2322 222222 2345679999999999999875322 223333322222 2334667786
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
+|++|+|+||.||+++. ++.++|+|||++..+....... ..++..+++++....+......|.+++...+
T Consensus 123 ~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~--------~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 192 (331)
T cd06649 123 HQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (331)
T ss_pred CCEEcCCCChhhEEEcC--CCcEEEccCccccccccccccc--------CCCCcCcCCHhHhcCCCCCchHhHHHHHHHH
Confidence 47999999999999985 7899999999998775432211 2345666777777666666778999998877
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 193 ~el~ 196 (331)
T cd06649 193 VELA 196 (331)
T ss_pred HHHH
Confidence 6654
No 89
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.46 E-value=1.2e-13 Score=149.49 Aligned_cols=185 Identities=18% Similarity=0.244 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+...... .+. +-.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~------~~~ 47 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA---------------------------------QET------VSF 47 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhH------HHH
Confidence 6799999999999998 68999999874211000 000 111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+... +++++ +.++. +.....++||||++|++|.++.......++...+...+ +...+..+|.
T Consensus 48 ~~~e~~i~~~~-----~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 48 FEEERDILSIS-----NSPWI--PQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred HHHHHHHHHhC-----CCCCC--cceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23333333222 22332 23322 33456799999999999998754332334433333222 3345788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH------cCCCCCCCChH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ------MGVLVPTGDTT 533 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~------lG~~~~~~D~~ 533 (773)
.|++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.++++++.. -+......|++
T Consensus 121 ~~i~H~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 193 (330)
T cd05601 121 MGYVHRDIKPENVLIDR--TGHIKLADFGSAARLTANKMVN-----SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWW 193 (330)
T ss_pred CCeEcccCchHheEECC--CCCEEeccCCCCeECCCCCcee-----eecccCCccccCHHHhccccccccCCCCCcceee
Confidence 99999999999999985 8999999999998876432210 01123456677777765 23344567888
Q ss_pred HHHHHHHHHH
Q 004115 534 AVRRTAQFFL 543 (773)
Q Consensus 534 ~l~~~i~~~l 543 (773)
++...+++++
T Consensus 194 slG~il~el~ 203 (330)
T cd05601 194 SLGVIAYEMI 203 (330)
T ss_pred cccceeeeec
Confidence 8876665543
No 90
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.46 E-value=3.2e-13 Score=149.79 Aligned_cols=185 Identities=19% Similarity=0.177 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+....-. ..+ ...-.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~----------------------------------~~~-----~~~~~ 89 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM----------------------------------IKR-----SDSAF 89 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh----------------------------------hhh-----hhHHH
Confidence 6799999999999998 589999998731100 000 00011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+..|...+..+ +++++.-..-+.+.....++||||++|++|.++... ...+...+... .+...+..+|..|
T Consensus 90 ~~~e~~i~~~~-----~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~ 162 (370)
T cd05621 90 FWEERDIMAFA-----NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMG 162 (370)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333333322 223322222222334567999999999999987532 22333333222 2334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCChHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRR 537 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l----G~~~~~~D~~~l~~ 537 (773)
++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.+++++++.- +......|.+++..
T Consensus 163 IvHrDLKp~NILl~~--~~~~kL~DFG~a~~~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ 235 (370)
T cd05621 163 LIHRDVKPDNMLLDK--HGHLKLADFGTCMKMDETGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (370)
T ss_pred eEecCCCHHHEEECC--CCCEEEEecccceecccCCcee-----cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehH
Confidence 999999999999985 8999999999998875432110 012245677788877653 23456789999988
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+++++
T Consensus 236 ilyell 241 (370)
T cd05621 236 FLFEML 241 (370)
T ss_pred HHHHHH
Confidence 777665
No 91
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.45 E-value=1.1e-12 Score=133.54 Aligned_cols=180 Identities=18% Similarity=0.212 Sum_probs=123.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|.||+|.. +|+.|++|+.++...+ ..-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------------------~~~~ 43 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE------------------------------------------KKEK 43 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh------------------------------------------HHHH
Confidence 6899999999999999 5899999998543320 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~ 459 (773)
+.+|.+.+.++. +++ ++..+. ......+++|||++|.+|.++........+...+...+.+ ..+..+|.
T Consensus 44 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~ 116 (253)
T cd05122 44 IINEIQILKKCK-----HPN--IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116 (253)
T ss_pred HHHHHHHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 344444444332 222 223322 2345679999999999999875443234555555444333 34788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|+||++++ ++.++|+|||.+..+.+.... ........++.++....+......|++++...+
T Consensus 117 ~~i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il 187 (253)
T cd05122 117 NGIIHRDIKAANILLTS--DGEVKLIDFGLSAQLSDTKAR-------NTMVGTPYWMAPEVINGKPYDYKADIWSLGITA 187 (253)
T ss_pred CCEecCCCCHHHEEEcc--CCeEEEeeccccccccccccc-------cceecCCcccCHHHHcCCCCCccccHHHHHHHH
Confidence 99999999999999986 789999999999988765420 112234455666666666666778999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 188 ~~l~ 191 (253)
T cd05122 188 IELA 191 (253)
T ss_pred HHHH
Confidence 6655
No 92
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.45 E-value=3.2e-13 Score=150.67 Aligned_cols=189 Identities=19% Similarity=0.196 Sum_probs=136.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|.||+||+++. +|+.+|+|+........ . . ..-+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~------------------------~-~--------------~~~~ 81 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG------------------------K-E--------------DRED 81 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccc------------------------c-c--------------cHHH
Confidence 6799999999999999 59999999873211100 0 0 1225
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH--HHHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR--YAVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~--~li~~~l~qI~~~G 461 (773)
..+|.+.++++.. +..-|.++.+| +.....++|||+++|+.|-|..... .+.....+. ..+...++++|..|
T Consensus 82 v~~Ev~il~~l~~---hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g 155 (382)
T KOG0032|consen 82 VRREVAILQQLSG---HPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG 155 (382)
T ss_pred HHHHHHHHHhccC---CCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5677777766643 33346667777 4466789999999999998854322 233333322 23344588899999
Q ss_pred CccCCCCCCceEEeccC--CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVN--GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~--~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
++|+|+||.|+|+.... +++++++|||++..+.+..+. .-..+.+.+++++.+......+..|+++++...
T Consensus 156 vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~-------~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~ 228 (382)
T KOG0032|consen 156 VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERL-------HTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVIL 228 (382)
T ss_pred ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceE-------eeecCCccccCchhhcCCCCCcccchhHHHHHH
Confidence 99999999999997532 258999999999999873221 224678999999998866678889999999988
Q ss_pred HHHHHHH
Q 004115 540 QFFLNSF 546 (773)
Q Consensus 540 ~~~l~~~ 546 (773)
+.++..+
T Consensus 229 yiLL~G~ 235 (382)
T KOG0032|consen 229 YILLSGV 235 (382)
T ss_pred HHHhhCC
Confidence 8887654
No 93
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.45 E-value=5.7e-13 Score=147.74 Aligned_cols=184 Identities=21% Similarity=0.236 Sum_probs=118.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+....- . ..+- ..-.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~--~--------------------------------~~~~-----~~~~ 89 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--M--------------------------------IKRS-----DSAF 89 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHH--h--------------------------------hhhH-----HHHH
Confidence 6799999999999999 58999999873200 0 0000 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+..+ +++++ ++++. ......++||||++|++|.++... ...+...+...+ +...+..+|.
T Consensus 90 ~~~e~~i~~~~-----~hp~i--v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 90 FWEERDIMAFA-----NSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred HHHHHHHHHhC-----CCCCC--CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33343333322 22332 23332 233457999999999999887532 233333332222 3344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCChHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAV 535 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l----G~~~~~~D~~~l 535 (773)
.|++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.+++++++.. +......|++++
T Consensus 161 ~~ivHrDLkp~NIll~~--~~~ikL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSl 233 (371)
T cd05622 161 MGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 233 (371)
T ss_pred CCEEeCCCCHHHEEECC--CCCEEEEeCCceeEcCcCCccc-----ccCcccCccccCHHHHhccCCCccCCCccceeeh
Confidence 99999999999999985 8999999999998875432110 011235677888887753 234567899999
Q ss_pred HHHHHHHHH
Q 004115 536 RRTAQFFLN 544 (773)
Q Consensus 536 ~~~i~~~l~ 544 (773)
...+++++.
T Consensus 234 Gvilyell~ 242 (371)
T cd05622 234 GVFLYEMLV 242 (371)
T ss_pred hHHHHHHHh
Confidence 988777653
No 94
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.45 E-value=8.2e-13 Score=139.46 Aligned_cols=184 Identities=20% Similarity=0.180 Sum_probs=115.5
Q ss_pred ccccccceeEEEEEee---cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l---~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
+.||+|++|.||+|+. .|+.||||+.+...... . . ..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---------------------------~-------~------~~ 46 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---------------------------G-------M------PL 46 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC---------------------------C-------c------hH
Confidence 5799999999999987 36889999875332110 0 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee-------ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW-------EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VES 452 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~-------e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~l--i~~ 452 (773)
.+.+|...+..+.. +. +++ +++++. +..+..+++|||++| .+.++... ...+.+...+...+ +..
T Consensus 47 ~~~~e~~~l~~l~~-~~-hpn--iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~ 121 (290)
T cd07862 47 STIREVAVLRHLET-FE-HPN--VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLR 121 (290)
T ss_pred HHHHHHHHHHhhcc-cC-CCC--cceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 22233333333221 11 232 233332 123457999999986 66665432 22234444433332 234
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 532 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~ 532 (773)
.+..+|..|++|+|+||.||+++. ++.++++|||++..++..... ....+...+++++...-+......|+
T Consensus 122 aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Di 192 (290)
T cd07862 122 GLDFLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMAL-------TSVVVTLWYRAPEVLLQSSYATPVDL 192 (290)
T ss_pred HHHHHHHCCeeeCCCCHHHEEEcC--CCCEEEccccceEeccCCccc-------ccccccccccChHHHhCCCCCCccch
Confidence 478899999999999999999985 789999999999877543110 11234556677777666666677899
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+++++
T Consensus 193 wslG~il~el~ 203 (290)
T cd07862 193 WSVGCIFAEMF 203 (290)
T ss_pred HHHHHHHHHHH
Confidence 99998777665
No 95
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.45 E-value=6.7e-13 Score=144.23 Aligned_cols=185 Identities=17% Similarity=0.194 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+++. +++.||+|+.... +. . -... ...
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~-------~~---------~-----------------~~~~------~~~ 47 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKW-------EM---------L-----------------KRAE------TAC 47 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHH-------HH---------H-----------------HhhH------HHH
Confidence 6799999999999998 5789999987210 00 0 0000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
|..|...+..+ +++. ++.++. +.....+|||||++|++|.++........+...+... .+...+..+|.
T Consensus 48 ~~~e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 48 FREERDVLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred HHHHHHHHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33333322222 2222 233332 3345679999999999999875432222333322222 23344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-----cCCCCCCCChHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-----MGVLVPTGDTTA 534 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-----lG~~~~~~D~~~ 534 (773)
.|++|+|+||.||+++. ++.++|+|||++..+....... .....+...++++++.. .+......|+++
T Consensus 121 ~~iiHrDlkp~Nili~~--~~~~kL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwS 193 (332)
T cd05623 121 LHYVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQ-----SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS 193 (332)
T ss_pred CCeEecCCCHHHEEECC--CCCEEEeecchheecccCCcce-----ecccccCccccCHHHHhccccCCCCCCCcCCEEe
Confidence 99999999999999985 8899999999987764332110 01123556677777765 234456789999
Q ss_pred HHHHHHHHH
Q 004115 535 VRRTAQFFL 543 (773)
Q Consensus 535 l~~~i~~~l 543 (773)
+...+.+++
T Consensus 194 lGvil~ell 202 (332)
T cd05623 194 LGVCMYEML 202 (332)
T ss_pred eHHHHHHHh
Confidence 988776665
No 96
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.44 E-value=1.1e-12 Score=137.81 Aligned_cols=182 Identities=16% Similarity=0.134 Sum_probs=116.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.+ +|+.||||+......+. .. -+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~------~~ 48 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-----------------------------------EI------ED 48 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-----------------------------------HH------HH
Confidence 5699999999999998 58999999874221100 00 13
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|+..+.++. ++++.-..-+.......++||||++|+++.++.. ........+...+ +...+..+|..|
T Consensus 49 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 49 IQQEITVLSQCD-----SPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred HHHHHHHHHcCC-----CCccHhhhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 344444444331 2222111111123456799999999999988643 2223333332222 223467789999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||+||++++ ++.+++.|||++..+....... ....++..++.++...-+......|++++...+.+
T Consensus 122 ivH~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 193 (277)
T cd06642 122 KIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIE 193 (277)
T ss_pred eeccCCChheEEEeC--CCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHH
Confidence 999999999999985 7899999999998876543211 11224455666666665555667899998877665
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 194 l~ 195 (277)
T cd06642 194 LA 195 (277)
T ss_pred HH
Confidence 54
No 97
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.43 E-value=1.6e-12 Score=133.38 Aligned_cols=186 Identities=17% Similarity=0.165 Sum_probs=122.4
Q ss_pred ccccccceeEEEEEee--c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~---G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|+||+|.. . +..|+||+.++..... .
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~ 39 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-----------------------------------------E 39 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-----------------------------------------H
Confidence 4689999999999999 3 7899999885432211 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh--------hcCCCHHHHHHHHHH-
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--------ELGVDRKRLGRYAVE- 451 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--------~~~~d~~~la~~li~- 451 (773)
.-++..|.+.+.++. ++++.-..-+.......+++|||++|++|.++.... ....+...+...+.+
T Consensus 40 ~~~~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (262)
T cd00192 40 RKDFLKEARVMKKLG-----HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI 114 (262)
T ss_pred HHHHHHHHHHHhhcC-----CCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHH
Confidence 113344554444443 222221111222355679999999999999875433 233444444444333
Q ss_pred -HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004115 452 -SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 530 (773)
Q Consensus 452 -~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~ 530 (773)
..+..+|..|++|+|++|.||+++. ++.++++|||.+..+........ ..-...+..+++++....+......
T Consensus 115 ~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~ 188 (262)
T cd00192 115 AKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDDDYYRK----KTGGKLPIRWMAPESLKDGIFTSKS 188 (262)
T ss_pred HHHHHHHHcCCcccCccCcceEEECC--CCcEEEccccccccccccccccc----ccCCCcCccccCHHHhccCCcchhh
Confidence 3478899999999999999999986 79999999999998765431000 0111234456677776666666778
Q ss_pred ChHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFL 543 (773)
Q Consensus 531 D~~~l~~~i~~~l 543 (773)
|++++...+++++
T Consensus 189 Di~slG~il~~l~ 201 (262)
T cd00192 189 DVWSFGVLLWEIF 201 (262)
T ss_pred ccHHHHHHHHHHH
Confidence 9999988777665
No 98
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.43 E-value=6.8e-13 Score=146.95 Aligned_cols=190 Identities=21% Similarity=0.231 Sum_probs=119.8
Q ss_pred ccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 302 RFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 302 ~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
.|+. +.||.|++|.||+|+. +|+.||||+....- + . +.
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-------~---------~------------------~~----- 84 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-------M---------I------------------KR----- 84 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-------h---------h------------------hh-----
Confidence 4443 6799999999999998 58999999873210 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQ 456 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~q 456 (773)
...-.+..|...+..+ +++++.-..-+.+.....++||||++|++|.++... .......+... .+...+..
T Consensus 85 ~~~~~~~~e~~il~~~-----~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~ 157 (370)
T cd05596 85 SDSAFFWEERDIMAHA-----NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDA 157 (370)
T ss_pred hhHHHHHHHHHHHHhC-----CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 0011233444333332 223322111122334567999999999999886532 22333333222 23345788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCCh
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDT 532 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l----G~~~~~~D~ 532 (773)
+|..|++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.++++++..- +......|+
T Consensus 158 LH~~~ivHrDLkp~NILl~~--~~~~kL~DfG~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di 230 (370)
T cd05596 158 IHSMGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMDANGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDW 230 (370)
T ss_pred HHHCCeeccCCCHHHEEEcC--CCCEEEEeccceeeccCCCccc-----CCCCCCCcCeECHHHhccCCCCCCCCCceee
Confidence 99999999999999999985 8999999999998775432100 011235667777777642 234567899
Q ss_pred HHHHHHHHHHHH
Q 004115 533 TAVRRTAQFFLN 544 (773)
Q Consensus 533 ~~l~~~i~~~l~ 544 (773)
+++...+++++.
T Consensus 231 wSlGvilyellt 242 (370)
T cd05596 231 WSVGVFLYEMLV 242 (370)
T ss_pred eehhHHHHHHHh
Confidence 999987776653
No 99
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.43 E-value=1.4e-12 Score=144.80 Aligned_cols=86 Identities=15% Similarity=0.069 Sum_probs=62.2
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|+||.||++++ ++.++++|||++..+........ .+.......+++++....+......|
T Consensus 225 ~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sD 298 (375)
T cd05104 225 KGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRNDSNYVV----KGNARLPVKWMAPESIFNCVYTFESD 298 (375)
T ss_pred HHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccCcccccc----cCCCCCCcceeChhHhcCCCCCCCCC
Confidence 3477889999999999999999985 78899999999987754322110 11111223466677776666777899
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 299 i~slG~~l~ell 310 (375)
T cd05104 299 VWSYGILLWEIF 310 (375)
T ss_pred HHHHHHHHHHHH
Confidence 999988776655
No 100
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=1.8e-13 Score=147.26 Aligned_cols=192 Identities=19% Similarity=0.208 Sum_probs=118.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+|||.|++|.|+.|+. +|+.||||-.. +.++. . -.++...+|+
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~------------------~~F~~-----------~-----~~akRtlREl 72 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL------------------NPFEN-----------Q-----IDAKRTLREL 72 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh------------------hhhhc-----------h-----HHHHHHHHHH
Confidence 48999999999999999 69999999541 11110 0 0123334454
Q ss_pred HHHHHHHHHHHHHH-hcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhC
Q 004115 383 DYTQEAANAELFAS-NFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~-~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~l~qI~~~ 460 (773)
.+.+ +|++ |......|..|....+ -...|+|+|++ +..|.++....+ ...+..+..-..+-..++.+|+.
T Consensus 73 klLr------~~~HeNIi~l~di~~p~~~~~-f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA 144 (359)
T KOG0660|consen 73 KLLR------HLRHENIIGLLDIFRPPSRDK-FNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA 144 (359)
T ss_pred HHHH------HhcCCCcceEEeecccccccc-cceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc
Confidence 4433 3332 2222233445522222 24579999999 456666543332 22222233333333446778999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l-~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
|++|||+||+|++++. +..++++|||+++.+++.....+ .+.+..-.-+.+ +.++...-.+...|+++++-.+
T Consensus 145 nViHRDLKPsNll~n~--~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAP----Elll~~~~Yt~aiDiWSvGCI~ 218 (359)
T KOG0660|consen 145 NVIHRDLKPSNLLLNA--DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAP----ELLLNSSEYTKAIDIWSVGCIL 218 (359)
T ss_pred cccccccchhheeecc--CCCEEeccccceeeccccCcccchhcceeeeeecCH----HHHhccccccchhhhhhhhHHH
Confidence 9999999999999986 78899999999999975322221 222222222334 3445555567788999999887
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+|+.
T Consensus 219 AEmL~ 223 (359)
T KOG0660|consen 219 AEMLT 223 (359)
T ss_pred HHHHc
Confidence 77764
No 101
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.43 E-value=2.1e-12 Score=136.29 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=116.9
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||+|++|+||+++. +|+.||+|+........ ...+-.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---------------------------------------~~~~~~~~ 41 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---------------------------------------KSGEKMAL 41 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---------------------------------------chhhHHHH
Confidence 68999999999998 59999999873210000 00011122
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
.|...+.++ +++++.-..-+.+.....+++|||++|++|.+.... ...+.+...+...+ +...+..+|..|+
T Consensus 42 ~E~~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 116 (277)
T cd05607 42 LEKEILEKV-----NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI 116 (277)
T ss_pred HHHHHHHhc-----CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 344434333 223332111112334567999999999999875432 22234444443322 3345788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|.||++++ ++.++++|||++..+...... ....+...+++++....+......|++++...++++
T Consensus 117 vH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el 187 (277)
T cd05607 117 VYRDMKPENVLLDD--QGNCRLSDLGLAVELKDGKTI-------TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM 187 (277)
T ss_pred EEccCChHhEEEcC--CCCEEEeeceeeeecCCCcee-------eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence 99999999999985 789999999998876543211 011344566677776666667778999998877766
Q ss_pred HH
Q 004115 543 LN 544 (773)
Q Consensus 543 l~ 544 (773)
+.
T Consensus 188 ~~ 189 (277)
T cd05607 188 VA 189 (277)
T ss_pred Hh
Confidence 53
No 102
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.43 E-value=6e-13 Score=140.30 Aligned_cols=185 Identities=16% Similarity=0.177 Sum_probs=116.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+.+...... +... .
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~------~ 46 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE----------------------------------EVKE------T 46 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc----------------------------------cchh------h
Confidence 6799999999999999 58999999874321100 0011 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|...+.++. +..-+.+..++ +.....++||||++|..+..+... ..+.+...+...+ +-..+..+|..|
T Consensus 47 ~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 47 TLRELKMLRTLK----QENIVELKEAF-RRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred HHHHHHHHHhCC----CccccchhhhE-ecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 223333333332 11112222222 234567999999999877655322 2234444433332 223477889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++++|||++..++......... ..+...+++++...-+......|++++...+++
T Consensus 121 i~H~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (287)
T cd07848 121 IVHRDIKPENLLISH--NDVLKLCDFGFARNLSEGSNANYTE-----YVATRWYRSPELLLGAPYGKAVDMWSVGCILGE 193 (287)
T ss_pred eecCCCCHHHEEEcC--CCcEEEeeccCcccccccccccccc-----cccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence 999999999999985 7899999999998875433221111 123445666666655556677899999887776
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 194 l~ 195 (287)
T cd07848 194 LS 195 (287)
T ss_pred HH
Confidence 65
No 103
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.43 E-value=1.9e-12 Score=134.18 Aligned_cols=179 Identities=15% Similarity=0.143 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+.+|.|++|.||+|..+|+.|++|..+.+.. .-+|.
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~--------------------------------------------~~~~~ 47 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--------------------------------------------AQAFL 47 (256)
T ss_pred eeecccCCCeEEEEEEcCCcEEEEEeCCCch--------------------------------------------HHHHH
Confidence 6799999999999999999999998632100 11345
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
+|+..+.++. +..-+.+...+.+.....+++|||++|++|.++...... ..+...+...+ +...+..+|..|+
T Consensus 48 ~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 123 (256)
T cd05082 48 AEASVMTQLR----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF 123 (256)
T ss_pred HHHHHHHhCC----CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 5665555542 222222222333334567999999999999987543222 13333333322 2244788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|+||++++ ++.++++|||++......... ......+++++....+......|++++.-.++++
T Consensus 124 ~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l 192 (256)
T cd05082 124 VHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDT---------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192 (256)
T ss_pred eccccchheEEEcC--CCcEEecCCccceeccccCCC---------CccceeecCHHHHccCCCCchhhhHHHHHHHHHH
Confidence 99999999999986 889999999998865432211 1123346666666666666778999988776655
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 193 ~ 193 (256)
T cd05082 193 Y 193 (256)
T ss_pred H
Confidence 4
No 104
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.42 E-value=9.2e-13 Score=151.10 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=122.1
Q ss_pred cccccccceeEEEEEee--c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~-G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
.+.+|.|++|.||+|.. + ++.||+|....+... ..
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~------------------------------------------~~ 109 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER------------------------------------------QA 109 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH------------------------------------------HH
Confidence 36799999999999987 4 688999965211000 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh--h-hcCCCHHHHHHHH--HHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VESYL 454 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l--~-~~~~d~~~la~~l--i~~~l 454 (773)
..++.|+..+..+ ++++ +++++. +.....+|||||++|++|.+.... . ...++...+...+ +...+
T Consensus 110 ~~~~~E~~~l~~l-----~Hpn--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 182 (478)
T PTZ00267 110 AYARSELHCLAAC-----DHFG--IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLAL 182 (478)
T ss_pred HHHHHHHHHHHhC-----CCCC--EeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 1234455544443 2233 333332 334667999999999999875421 1 1223443333332 33457
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
..+|..|++|+|+||.||+++. ++.++|+|||++..++........ ....+.+.+++++...-+......|+++
T Consensus 183 ~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgla~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 256 (478)
T PTZ00267 183 DEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGFSKQYSDSVSLDVA----SSFCGTPYYLAPELWERKRYSKKADMWS 256 (478)
T ss_pred HHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcCceecCCccccccc----cccCCCccccCHhHhCCCCCCcHHhHHH
Confidence 8899999999999999999985 889999999999987654321111 1123566788888777666677789999
Q ss_pred HHHHHHHHHH
Q 004115 535 VRRTAQFFLN 544 (773)
Q Consensus 535 l~~~i~~~l~ 544 (773)
+...+.+++.
T Consensus 257 lG~~l~el~t 266 (478)
T PTZ00267 257 LGVILYELLT 266 (478)
T ss_pred HHHHHHHHHh
Confidence 9887776653
No 105
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.42 E-value=1.5e-12 Score=136.25 Aligned_cols=184 Identities=12% Similarity=0.106 Sum_probs=115.3
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|+||+||+|++ .+..||+|+.+.+.... .
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------------~ 49 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK-----------------------------------------Q 49 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH-----------------------------------------H
Confidence 5799999999999986 25789999875432110 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
+.+|..|...+.++ . ++++ .+...+ ......++||||++|++|.++............+...+ +...+..+
T Consensus 50 ~~~~~~e~~~l~~l----~-h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 50 RRGFLAEALTLGQF----D-HSNIVRLEGVI-TRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred HHHHHHHHHHHhcC----C-CCCcCeEEEEE-ecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345555544443 2 2332 222222 23456799999999999998754332233444333322 22446789
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|++|.||+++. ++.+++.|||.......+... . . ........+++++....+......|++++.-
T Consensus 124 H~~~iiH~dikp~nili~~--~~~~~l~dfg~~~~~~~~~~~--~-~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 196 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNS--DLVCKISGFRRLQEDKSEAIY--T-T--MSGKSPVLWAAPEAIQYHHFSSASDVWSFGI 196 (266)
T ss_pred HHCCEeeccccHhhEEEcC--CCcEEECCCcccccccccchh--c-c--cCCCCceeecCHHHHhhCCccchhHHHHHHH
Confidence 9999999999999999985 789999999977654322110 0 0 0001123345566665566667789999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 197 ~l~ell 202 (266)
T cd05064 197 VMWEVM 202 (266)
T ss_pred HHHHHh
Confidence 666543
No 106
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.42 E-value=2.9e-13 Score=144.15 Aligned_cols=187 Identities=15% Similarity=0.120 Sum_probs=122.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-|++|+||.||||++ +++-||+|-.+++-++. + +.+ -
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-----------------------G--FPI---------------t 121 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-----------------------G--FPI---------------T 121 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC-----------------------C--Ccc---------------h
Confidence 5699999999999999 68999999887654322 1 111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~ 460 (773)
..+|..-+.+++ +..-|.+-+|+..- -.+.+||||||+- .|..+...-...+...++-.. .+-..++.+|.+
T Consensus 122 sLREIniLl~~~----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~ 196 (419)
T KOG0663|consen 122 SLREINILLKAR----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN 196 (419)
T ss_pred hHHHHHHHHhcC----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 233433343333 22335555655432 2457999999985 333332211222333332222 233447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
.++|||+||.|+|+++ .|.+++.|||+++.++.. ...+..++..+.-+-++.+ +..-..+...|++++.-++.
T Consensus 197 wilHRDLK~SNLLm~~--~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPELL----LG~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 197 WILHRDLKTSNLLLSH--KGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPELL----LGAKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred eeEecccchhheeecc--CCcEEecccchhhhhcCC-cccCcceEEEeeecCHHHh----cCCcccCcchhhhhHHHHHH
Confidence 9999999999999986 899999999999999765 3455666666666666543 33444556789999998777
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 270 E~l~ 273 (419)
T KOG0663|consen 270 ELLT 273 (419)
T ss_pred HHHh
Confidence 6654
No 107
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.42 E-value=7e-13 Score=141.60 Aligned_cols=184 Identities=16% Similarity=0.108 Sum_probs=112.4
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|+. +|+.||||+.+...... ...
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------------~~~ 48 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-----------------------------------------TPF 48 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-----------------------------------------cch
Confidence 37899999999999998 68999999874211000 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.+.+|+..+.++. ++++....-+.......++||||++| .+.+.........+...+...+ +-..+..+|..
T Consensus 49 ~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 122 (303)
T cd07869 49 TAIREASLLKGLK-----HANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR 122 (303)
T ss_pred hHHHHHHHHhhCC-----CCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2334544444432 23333222222335567999999986 4444332222334544444333 22347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|+||+||++++ ++.++|+|||++...+...... .-..+...++++++..- .......|++++...+
T Consensus 123 ~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 194 (303)
T cd07869 123 YILHRDLKPQNLLISD--TGELKLADFGLARAKSVPSHTY------SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIF 194 (303)
T ss_pred CeecCCCCHHHEEECC--CCCEEECCCCcceeccCCCccC------CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHH
Confidence 9999999999999985 7899999999987654321110 00112344556665432 2334456899998877
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 195 ~~l~ 198 (303)
T cd07869 195 VEMI 198 (303)
T ss_pred HHHH
Confidence 6655
No 108
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.42 E-value=2.4e-12 Score=133.55 Aligned_cols=181 Identities=19% Similarity=0.251 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|+.|++|+...+.... . +-+
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~------~~~ 45 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA-----------------------------------I------QKQ 45 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH-----------------------------------H------HHH
Confidence 5799999999999999 58999999875432111 1 112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh-
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS- 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~- 459 (773)
+.+|...+.++. ++++ .+...+ ......+++|||++|.+|.++........+...+...+.+ ..+..+|.
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 46 ILRELDILHKCN-----SPYIVGFYGAF-YNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred HHHHHHHHHHCC-----CCchhhhheee-ecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 333443333322 2222 122222 2235679999999999999875433233344333333222 33678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|+||++++ ++.++++|||.+..+....... ...+..++.++...........|++++...+
T Consensus 120 ~~i~H~dl~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l 189 (265)
T cd06605 120 HKIIHRDVKPSNILVNS--RGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSL 189 (265)
T ss_pred CCeecCCCCHHHEEECC--CCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999999999986 7899999999988775443222 2345566777776655566678999998776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 190 ~~l~ 193 (265)
T cd06605 190 IELA 193 (265)
T ss_pred HHHH
Confidence 6654
No 109
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.42 E-value=1e-12 Score=139.46 Aligned_cols=182 Identities=13% Similarity=0.061 Sum_probs=111.6
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|+. +|+.||+|+.+...... . ..
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------~--------------~~ 48 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG---------------------------A--------------PC 48 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC---------------------------c--------------ch
Confidence 36799999999999998 68999999874221100 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQIL 458 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~ 458 (773)
.+.+|.+.+.++. +++| .+++. ......++||||++| ++.++............+... .+...+..+|
T Consensus 49 ~~~~E~~~l~~l~-----h~ni--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH 120 (288)
T cd07871 49 TAIREVSLLKNLK-----HANI--VTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH 120 (288)
T ss_pred hHHHHHHHHHhCC-----CCCE--eeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2234544444432 2332 33332 233456899999998 676654322222333333222 2334478899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 537 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~ 537 (773)
..|++|+|+||.||+++. ++.++++|||++.......... .-..+...++++++..- .......|++++..
T Consensus 121 ~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 192 (288)
T cd07871 121 KRKILHRDLKPQNLLINE--KGELKLADFGLARAKSVPTKTY------SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGC 192 (288)
T ss_pred hCCcccCCCCHHHEEECC--CCCEEECcCcceeeccCCCccc------cCceecccccChHHhcCCcccCcHHHHHHHHH
Confidence 999999999999999985 7899999999987654322110 00122444555665432 22345578999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 193 ~l~~l~ 198 (288)
T cd07871 193 ILYEMA 198 (288)
T ss_pred HHHHHH
Confidence 776654
No 110
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.42 E-value=2e-12 Score=135.43 Aligned_cols=186 Identities=19% Similarity=0.188 Sum_probs=119.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|+||+|.. +|+.||||+.+...... . .-+
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------~--------------~~~ 45 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD---------------------------D--------------VSD 45 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCch---------------------------h--------------HHH
Confidence 5799999999999998 68999999875432111 0 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+.+|...+.++.. ..++++.-+.-+....+..+++|||++|.+|.++.... .++...+... .+...+..+|..|
T Consensus 46 ~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 46 IQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred HHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3445555555532 12333322222223345679999999999998875332 3333333222 2334467899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~-~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.++++|||.+..+........ ...+...+++++....|. .....|++++...+.
T Consensus 122 i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 193 (277)
T cd06917 122 VIHRDIKAANILVTN--TGNVKLCDFGVAALLNQNSSKRS------TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIY 193 (277)
T ss_pred cccCCcCHHHEEEcC--CCCEEEccCCceeecCCCccccc------cccCCcceeCHHHhccCCccccchhHHHHHHHHH
Confidence 999999999999986 88999999999988765432111 012334455566554443 355689999988776
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 194 ~ll~ 197 (277)
T cd06917 194 EMAT 197 (277)
T ss_pred HHHh
Confidence 6653
No 111
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.42 E-value=5.1e-12 Score=130.17 Aligned_cols=185 Identities=13% Similarity=0.069 Sum_probs=121.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.|++|........ . ...-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~------~~~~~ 45 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN----------------------------------R------REREE 45 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC----------------------------------H------HHHHH
Confidence 5799999999999998 6899999976321000 0 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|.+.+.++. ++++.-..-+.......+++|||++|.+|.++.... ....+...+...+ +...+..+|..
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 46 AIDEARVLAKLD-----SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred HHHHHHHHHhcC-----CCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 455555444442 232221111222334579999999999999875432 2234444443333 23346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.+++.|||++..+....... ....+.+.++++++...+...+..|.+++...+.
T Consensus 121 ~i~h~dl~~~nili~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 192 (256)
T cd08529 121 KILHRDIKSLNLFLDA--YDNVKIGDLGVAKLLSDNTNFA------NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLY 192 (256)
T ss_pred CcccCCCCcceEEEeC--CCCEEEcccccceeccCccchh------hccccCccccCHHHhcCCCCCCccchHHHHHHHH
Confidence 9999999999999985 7899999999998876542211 1123455567777777776777889999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (256)
T cd08529 193 ECC 195 (256)
T ss_pred HHH
Confidence 654
No 112
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.42 E-value=7.5e-13 Score=144.86 Aligned_cols=195 Identities=17% Similarity=0.175 Sum_probs=117.5
Q ss_pred CCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 293 GAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 293 G~~~~eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
|...-.++..|.. +.||.|++|.||+|.. .|+.||||+........
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------- 57 (355)
T cd07874 9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ------------------------------- 57 (355)
T ss_pred CchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-------------------------------
Confidence 4333345556643 7899999999999998 58999999874322110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKR 444 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~ 444 (773)
.. ..++.+|...+..+. +..-+.+..++. +.....++||||++|.. .+... ...+...
T Consensus 58 ---~~------~~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l-~~~~~---~~l~~~~ 120 (355)
T cd07874 58 ---TH------AKRAYRELVLMKCVN----HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANL-CQVIQ---MELDHER 120 (355)
T ss_pred ---HH------HHHHHHHHHHHHHhC----CCchhceeeeeeccccccccceeEEEhhhhcccH-HHHHh---hcCCHHH
Confidence 00 011223333333322 111122222221 11234699999999853 33221 1233333
Q ss_pred HHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004115 445 LGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 445 la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~ 522 (773)
+...+ +...+..+|..|++|+|+||+||+++. ++.++|+|||++......... .-..+...++++++..
T Consensus 121 ~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~~t~~y~aPE~~~ 191 (355)
T cd07874 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVIL 191 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCCEEEeeCcccccCCCcccc-------CCccccCCccCHHHHc
Confidence 32222 234478899999999999999999985 889999999999876543211 0112344566666665
Q ss_pred cCCCCCCCChHHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
-....+..|++++...+.+++.
T Consensus 192 ~~~~~~~~DiwslG~il~el~~ 213 (355)
T cd07874 192 GMGYKENVDIWSVGCIMGEMVR 213 (355)
T ss_pred CCCCCchhhHHHHHHHHHHHHh
Confidence 4445667899999987776653
No 113
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.41 E-value=6.4e-12 Score=135.40 Aligned_cols=198 Identities=19% Similarity=0.188 Sum_probs=126.2
Q ss_pred HHHHHhCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 004115 287 IVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK 364 (773)
Q Consensus 287 iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~ 364 (773)
+...-++.+++..|.. .+.||+|++|+||+|+. +|+.||+|+....-...
T Consensus 14 ~~~~~~~~~~~~~f~~--~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-------------------------- 65 (317)
T cd06635 14 IAELFFKEDPEKLFTD--LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-------------------------- 65 (317)
T ss_pred HHHHhcCCCchhhhhh--hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc--------------------------
Confidence 4455677788877763 45799999999999998 68999999874221100
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHH
Q 004115 365 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK 443 (773)
Q Consensus 365 ~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~ 443 (773)
.+ ...++..|++.+.++. ++++ .+...+ ......++||||++| ++.++........+..
T Consensus 66 -------~~------~~~~~~~e~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~ 125 (317)
T cd06635 66 -------NE------KWQDIIKEVKFLQRIK-----HPNSIEYKGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEV 125 (317)
T ss_pred -------hH------HHHHHHHHHHHHHhCC-----CCCEEEEEEEE-eeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHH
Confidence 00 0123455555554442 2222 222222 234567999999987 5666543333334444
Q ss_pred HHHHHHH--HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 444 RLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 444 ~la~~li--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
.+...+. ...+..+|..|++|+|++|+||+++. ++.++++|||++...+.... ..+...+++++..
T Consensus 126 ~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~ 193 (317)
T cd06635 126 EIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASIASPANS----------FVGTPYWMAPEVI 193 (317)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCCccccCCccc----------ccCCccccChhhh
Confidence 4443332 23478889999999999999999975 78999999999876654321 1233445555554
Q ss_pred H---cCCCCCCCChHHHHHHHHHHHH
Q 004115 522 Q---MGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 522 ~---lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
. .+...+..|++++...+.+++.
T Consensus 194 ~~~~~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 194 LAMDEGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred hcCCCCCCCccccHHHHHHHHHHHHh
Confidence 2 2455667899999887766553
No 114
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.41 E-value=3e-12 Score=135.78 Aligned_cols=185 Identities=17% Similarity=0.117 Sum_probs=119.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +|+.||||+........ -..+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------------RKGEAM 46 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh---------------------------------------hhhHHH
Confidence 5699999999999998 68999999874321000 011234
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
+.+|+..+.++.+ +++ .+...+ ......++||||++|++|.+..... ....+...+..... ...+..+|.
T Consensus 47 ~~~E~~~l~~l~h-----~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 47 ALNEKQILEKVNS-----RFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred HHHHHHHHHhcCC-----CCEeeeeeee-cCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5566665555532 222 222222 2234679999999999998754322 22344444333322 234678999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||++++ ++.++++|||++..+....... -..+...++++++..-+......|.+++...+
T Consensus 121 ~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l 191 (285)
T cd05605 121 ERIVYRDLKPENILLDD--YGHIRISDLGLAVEIPEGETIR-------GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLI 191 (285)
T ss_pred CCcEecCCCHHHEEECC--CCCEEEeeCCCceecCCCCccc-------cccCCCCccCcHHhcCCCCCccccchhHHHHH
Confidence 99999999999999985 7899999999988765332110 01234456666666555556678999998777
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
++++.
T Consensus 192 ~el~~ 196 (285)
T cd05605 192 YEMIE 196 (285)
T ss_pred HHHHH
Confidence 66553
No 115
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.41 E-value=2.3e-12 Score=140.44 Aligned_cols=180 Identities=17% Similarity=0.195 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|++ +|+.||+|+.+...... . .-+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~------~~~ 49 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPA-----------------------------------I------RNQ 49 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHH-----------------------------------H------HHH
Confidence 5799999999999999 58899999875432111 0 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS- 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~- 459 (773)
+.+|++.+..+. +++| .+..++. .....+|||||++|++|.++.... ...+...+.... +...+..+|.
T Consensus 50 ~~~E~~~l~~l~-----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~ 122 (333)
T cd06650 50 IIRELQVLHECN-----SPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 122 (333)
T ss_pred HHHHHHHHHHCC-----CCcccceeEEEE-ECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 445555555542 2332 2223332 345679999999999999875322 123333222222 2233566786
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
+|++|+|+||+||+++. ++.++++|||++..+...... ...+...++++++..-.......|++++...+
T Consensus 123 ~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 192 (333)
T cd06650 123 HKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (333)
T ss_pred CCEEecCCChhhEEEcC--CCCEEEeeCCcchhhhhhccc--------cCCCCccccCHHHhcCCCCCcHHHHHHHHHHH
Confidence 58999999999999985 789999999998766432211 12345566777776655556678999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
++++
T Consensus 193 ~~l~ 196 (333)
T cd06650 193 VEMA 196 (333)
T ss_pred HHHH
Confidence 6654
No 116
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.41 E-value=6.9e-13 Score=143.70 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=81.9
Q ss_pred cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecce
Q 004115 413 YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 490 (773)
Q Consensus 413 ~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv 490 (773)
.....++||||++|++|.+.... ...++...+...+ +...+..+|..|++|+|+||.||+++. ++.++|+|||++
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a 143 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLS 143 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcC
Confidence 34567999999999999775432 2234444433322 233478899999999999999999985 789999999998
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHHHHH
Q 004115 491 GSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 491 ~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i~~~l 543 (773)
.......... ....+...+++++...-+ ......|++++...+++++
T Consensus 144 ~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell 191 (330)
T cd05586 144 KANLTDNKTT------NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC 191 (330)
T ss_pred cCCCCCCCCc------cCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence 7643221110 112356667777766432 2456689998877665544
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.41 E-value=1.8e-12 Score=140.27 Aligned_cols=185 Identities=18% Similarity=0.147 Sum_probs=115.3
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|+. +|+.||||+.++..... . ++. -.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~-------------------------------~~~-------~~~ 42 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-D-------------------------------DDV-------ECT 42 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-c-------------------------------chH-------HHH
Confidence 589999999999998 58899999985432100 0 000 011
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
..|...+.. .+ +++++.-..-+.......++||||++|++|.+..... ...+.......+ +...+..+|..|+
T Consensus 43 ~~e~~~l~~---~~-~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05619 43 MVEKRVLSL---AW-EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGI 117 (316)
T ss_pred HHHHHHHHh---cc-CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 223222221 11 2333321111223345578999999999998764321 223333322222 2334788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||.||+++. ++.++++|||++.......... .-..+...++++++..-.......|++++...++++
T Consensus 118 vHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05619 118 VYRDLKLDNILLDT--DGHIKIADFGMCKENMLGDAKT------CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM 189 (316)
T ss_pred EeCCCCHHHEEECC--CCCEEEccCCcceECCCCCCce------eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHH
Confidence 99999999999985 7899999999987542211100 012345667778777666667778999999887766
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 190 ~ 190 (316)
T cd05619 190 L 190 (316)
T ss_pred H
Confidence 5
No 118
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.41 E-value=2.7e-12 Score=138.66 Aligned_cols=183 Identities=20% Similarity=0.154 Sum_probs=116.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
-||.|++|.||+|+. +|+.||||+.+...... . ++ .-.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------------------~-------------~~-------~~~~ 42 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-------------------D-------------DD-------VECT 42 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-------------------h-------------hH-------HHHH
Confidence 489999999999999 58899999874321000 0 00 0012
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|.+.+.... ++++ +++++. +.....++||||++|++|.+.... ....+...+...+ +...+..+|..
T Consensus 43 ~~e~~il~~~~----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~ 115 (318)
T cd05570 43 MTEKRVLALAG----KHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHER 115 (318)
T ss_pred HHHHHHHHhcc----CCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 33333333221 2333 233332 334567999999999999875432 2234444333322 22346789999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++|+|||++.......... ....+++.++++++..-+......|++++...+.
T Consensus 116 ~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (318)
T cd05570 116 GIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGILGGVTT------STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLY 187 (318)
T ss_pred CeEccCCCHHHeEECC--CCcEEecccCCCeecCcCCCcc------cceecCccccCHHHhcCCCCCcchhhhhHHHHHH
Confidence 9999999999999986 7899999999886532111100 1123566777788776666677789999988776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 188 ~l~ 190 (318)
T cd05570 188 EML 190 (318)
T ss_pred HHh
Confidence 665
No 119
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.41 E-value=2.4e-12 Score=135.42 Aligned_cols=180 Identities=18% Similarity=0.151 Sum_probs=117.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||||+...... . ...-+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-------------------------------~----------~~~~~ 48 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-------------------------------E----------DEIED 48 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEecccc-------------------------------H----------HHHHH
Confidence 5799999999999998 589999998731100 0 01124
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~ 459 (773)
+.+|...+.++. ++ .+++++. ......++||||++|++|.++.. ....+...+.....+ ..+..+|.
T Consensus 49 ~~~e~~~l~~l~-----h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~ 119 (277)
T cd06640 49 IQQEITVLSQCD-----SP--YVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHS 119 (277)
T ss_pred HHHHHHHHHhCC-----CC--CEeeEEEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 455555444432 22 2333333 23456899999999999988653 223344443333322 33677899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|+||+++. ++.++++|||++..+....... ....++..++.++....+......|.+++...+
T Consensus 120 ~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 120 EKKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred CCccCcCCChhhEEEcC--CCCEEEcccccceeccCCcccc------ccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 99999999999999985 7899999999998876543211 001233345556665555566778999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 192 ~el~ 195 (277)
T cd06640 192 IELA 195 (277)
T ss_pred HHHH
Confidence 6654
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.41 E-value=8.2e-13 Score=152.38 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=86.2
Q ss_pred eEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeeccee
Q 004115 417 QILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 417 ~vLVMEyieG~~L~d~~~l~~---~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~ 491 (773)
.++||||++|++|.++..... ..+....+...+ +...+..+|..|++|+|+||.||+++. ++.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--NGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--CCCEEEEecccCe
Confidence 579999999999988653211 123333333333 234578899999999999999999986 7899999999998
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 492 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 492 ~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
.+......... ....+.+.++++++...+......|++++...+++++.
T Consensus 192 ~~~~~~~~~~~----~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 192 MYAATVSDDVG----RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred ecccccccccc----ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 76543221111 11235667888888876666777899999988777653
No 121
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.41 E-value=8.6e-13 Score=142.25 Aligned_cols=184 Identities=15% Similarity=0.181 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|.||+++. +|+.||||+.+..... ...
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~----------------------------------------~~~ 41 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK----------------------------------------VRD 41 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh----------------------------------------hhh
Confidence 4689999999999875 4789999987321000 001
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
...+..|.+.+.++. +++|.-..-+.+.....++||||++|++|.+.... ....+...+...+ +...+..+|
T Consensus 42 ~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH 115 (318)
T cd05582 42 RVRTKMERDILAEVN-----HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLH 115 (318)
T ss_pred HHHHHHHHHHHHhCC-----CCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112345555554442 23322211222334567999999999999876422 2223433333322 334478899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|+||.||+++. ++.++|+|||++........... -..+.+.+++++...-.......|++++...
T Consensus 116 ~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 187 (318)
T cd05582 116 SLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 187 (318)
T ss_pred HCCEecCCCCHHHeEECC--CCcEEEeeccCCcccCCCCCcee------cccCChhhcCHHHHcCCCCCCccceeccceE
Confidence 999999999999999985 78999999999876544321111 1235667777777765555667899988876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+++++
T Consensus 188 l~el~ 192 (318)
T cd05582 188 MFEML 192 (318)
T ss_pred eeeec
Confidence 65554
No 122
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=1.1e-12 Score=148.13 Aligned_cols=189 Identities=21% Similarity=0.343 Sum_probs=126.2
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.++||-|.||.|+.++- +...+|+|.+|. .|+ +.+.-...+..|-
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV--------------------------l~rnQvaHVKAER 680 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV--------------------------LMRNQVAHVKAER 680 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHH-------HHH--------------------------Hhhhhhhhhhhhh
Confidence 47899999999999886 344566665421 111 1112223556788
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQI 457 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l---i~~~l~qI 457 (773)
|.+.||.| ++ |-+.|..+. ...|.||+||+|+.+-.+ +-..|+-.+.+|+-- +.+.++.+
T Consensus 681 DILAEADn-----------~W--VVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LARFYIAEltcAiesV 745 (1034)
T KOG0608|consen 681 DILAEADN-----------EW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLARFYIAELTCAIESV 745 (1034)
T ss_pred hhHhhcCC-----------cc--eEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 88888743 33 334554443 456999999999998876 344566666666543 34557889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccC----------------------h------------hhH--HHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS----------------------P------------NIR--EGL 501 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls----------------------~------------~~r--~~l 501 (773)
|..||+|||+||+||||+. +|.|+|.|||+|.-+- + +.| +.-
T Consensus 746 HkmGFIHRDiKPDNILIDr--dGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h 823 (1034)
T KOG0608|consen 746 HKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQH 823 (1034)
T ss_pred HhccceecccCccceEEcc--CCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhh
Confidence 9999999999999999996 9999999999986330 0 001 122
Q ss_pred HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 502 LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 502 ~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.+++.+.+-+.+.+|+++.+.---.....|-+.....+++++
T Consensus 824 ~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 824 QRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred hhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 233344456777788877776543455678888887776655
No 123
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=2.8e-13 Score=148.57 Aligned_cols=190 Identities=18% Similarity=0.235 Sum_probs=130.9
Q ss_pred CChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHH
Q 004115 294 APLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIY 371 (773)
Q Consensus 294 ~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~ 371 (773)
.++...|..+ +-||.||||.||+|.. .++.||+|+..=+- .-
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~----------------------------------~~ 52 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE----------------------------------AE 52 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechhh----------------------------------cc
Confidence 3555666665 5699999999999999 69999999982111 11
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHH--H
Q 004115 372 DECASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG--R 447 (773)
Q Consensus 372 ~E~~~~l~~ElDf~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la--~ 447 (773)
+|. +-+.+|+.+..+.+ |+.+....+ + ..+..+++|||+.|+++.++...... .+...++ -
T Consensus 53 deI-ediqqei~~Ls~~~~~~it~yygsy-----------l--~g~~LwiiMey~~gGsv~~lL~~~~~-~~E~~i~~il 117 (467)
T KOG0201|consen 53 DEI-EDIQQEISVLSQCDSPNITEYYGSY-----------L--KGTKLWIIMEYCGGGSVLDLLKSGNI-LDEFEIAVIL 117 (467)
T ss_pred hhh-HHHHHHHHHHHhcCcchHHhhhhhe-----------e--ecccHHHHHHHhcCcchhhhhccCCC-Cccceeeeeh
Confidence 111 12334555544443 232222211 1 14567999999999999997654332 1333333 3
Q ss_pred HHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 448 YAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 448 ~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
+.+...+..+|.++.+|+|+|+.||++.. +|.+++.|||.+++++...... .. +.+.+-.|+++++...-..
T Consensus 118 re~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa~ql~~~~~rr--~t----fvGTPfwMAPEVI~~~~Y~ 189 (467)
T KOG0201|consen 118 REVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVAGQLTNTVKRR--KT----FVGTPFWMAPEVIKQSGYD 189 (467)
T ss_pred HHHHHHhhhhhhcceecccccccceeEec--cCcEEEEecceeeeeechhhcc--cc----ccccccccchhhhcccccc
Confidence 33445688899999999999999999996 6999999999999998765543 22 2468899999999864556
Q ss_pred CCCChHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFF 542 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~ 542 (773)
...|.++|.-.+.++
T Consensus 190 ~KADIWSLGITaiEl 204 (467)
T KOG0201|consen 190 TKADIWSLGITAIEL 204 (467)
T ss_pred chhhhhhhhHHHHHH
Confidence 778999998766554
No 124
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.40 E-value=3.5e-12 Score=135.24 Aligned_cols=185 Identities=16% Similarity=0.091 Sum_probs=119.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+..+..... -..+..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK---------------------------------------RKGESM 46 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh---------------------------------------hhHHHH
Confidence 5799999999999999 68999999874321100 001123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+.+|.+.+.++.+ ...+.+...+ ......+++|||++|+.+.+..... ..+.+...+...+.+ ..+..+|..
T Consensus 47 ~~~E~~il~~l~~----~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 47 ALNEKQILEKVNS----QFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred HHHHHHHHHHcCC----cCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4456665555532 1112222222 2334579999999999998754322 223444444443332 346889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||+||++++ ++.++++|||++..++..... .-..+...+++++...-+......|.+++...+.
T Consensus 122 ~iiH~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 122 NTVYRDLKPENILLDD--YGHIRISDLGLAVKIPEGESI-------RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred CeeecCCCHHHEEECC--CCCEEEecCCcceecCCCCcc-------cCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 9999999999999985 789999999998776533211 0112455566677665555666789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (285)
T cd05632 193 EMI 195 (285)
T ss_pred HHH
Confidence 654
No 125
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.40 E-value=4.2e-12 Score=132.59 Aligned_cols=198 Identities=16% Similarity=0.078 Sum_probs=118.7
Q ss_pred hhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 300 FERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 300 F~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
|.++..++||+|++|+||+|.. +|+.||||..+........ ......+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~--------------------------~~~~~~~~~~- 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGR--------------------------HDSRQKDMVK- 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcc--------------------------cchHHHHHHH-
Confidence 5566778999999999999987 6899999976432111000 0000011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESY 453 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~ 453 (773)
.+..|+..+..+. ++++ ++++ .+.....++||||++|++|.++.... ...+...+... .+...
T Consensus 54 -----~~~~e~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~ 120 (272)
T cd06629 54 -----ALRSEIETLKDLD-----HLNI--VQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEG 120 (272)
T ss_pred -----HHHHHHHHHHhcC-----CCCc--ceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHH
Confidence 2344444444432 2332 2232 23345679999999999998864322 22333322221 23334
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCC
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGD 531 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~--~~~~~D 531 (773)
+..+|..|++|+|++|+||+++. ++.++++|||+........... . .....+...++.++...... .....|
T Consensus 121 l~~lH~~~i~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~-~---~~~~~~~~~y~~PE~~~~~~~~~~~~~D 194 (272)
T cd06629 121 LAYLHSKGILHRDLKADNLLVDA--DGICKISDFGISKKSDDIYDND-Q---NMSMQGSVFWMAPEVIHSYSQGYSAKVD 194 (272)
T ss_pred HHHHhhCCeeecCCChhhEEEcC--CCeEEEeecccccccccccccc-c---cccccCCccccCHHHhccccCCCCccch
Confidence 67899999999999999999985 8899999999987654321110 0 01112334455555554332 455679
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 195 v~slG~~l~~l~ 206 (272)
T cd06629 195 IWSLGCVVLEMF 206 (272)
T ss_pred hHHHHHHHHHHH
Confidence 999987766554
No 126
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.40 E-value=3.4e-12 Score=133.07 Aligned_cols=185 Identities=16% Similarity=0.178 Sum_probs=118.2
Q ss_pred ccccccceeEEEEEee--c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~---G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|.||+|++ + ...||||+.+++.... .
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------------~ 48 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK-----------------------------------------Q 48 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChH-----------------------------------------H
Confidence 6899999999999998 2 3579999875432111 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQI 457 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI 457 (773)
.-+|..|...+.++. ++++ .+...+ ......+++|||++|.+|.++........+...+...+. ...+..+
T Consensus 49 ~~~~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 49 RLDFLTEASIMGQFD-----HPNIIRLEGVV-TKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred HHHHHHHHHHHHhCC-----CCCcceEeEEE-ecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 123445555554442 2222 222222 234557999999999999987543333345444444332 2336788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|++|.||++++ ++.+++.|||++..+......... ........++.++....+...+..|++++..
T Consensus 123 h~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~ 196 (266)
T cd05033 123 SEMNYVHRDLAARNILVNS--NLVCKVSDFGLSRRLEDSEATYTT----KGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 196 (266)
T ss_pred HhCCcccCCCCcceEEEcC--CCCEEECccchhhcccccccceec----cCCCCCccccChhhhccCCCccccchHHHHH
Confidence 9999999999999999986 789999999999987521111000 0011223456666665556667789999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 197 ~l~~l~ 202 (266)
T cd05033 197 VMWEVM 202 (266)
T ss_pred HHHHHH
Confidence 666543
No 127
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.40 E-value=1.2e-12 Score=134.35 Aligned_cols=136 Identities=21% Similarity=0.291 Sum_probs=97.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.+||+||||-+|.|.. +|++||||+-...+..- .
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp--------------------------------------------q 56 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP--------------------------------------------Q 56 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCCc--------------------------------------------c
Confidence 6899999999999998 79999999875443211 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCC--CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st--~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~---~~l~qI~ 458 (773)
+..|++--..++ +.+.+|.+.+-.+. ..+|||+.+ |.+|.|+..+....+..+.+. .+++ .-++.+|
T Consensus 57 L~yEskvY~iL~------~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvL-MLaDQml~RiEyvH 128 (341)
T KOG1163|consen 57 LLYESKVYRILQ------GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVL-MLADQMLSRIEYVH 128 (341)
T ss_pred hhHHHHHHHHhc------cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHH-HHHHHHHHHHHHHH
Confidence 234554333332 35778888874443 459999998 889999877655555544322 1222 2267789
Q ss_pred hCCCccCCCCCCceEEec-cCCCcEEEEeecceecc
Q 004115 459 SHGFFHADPHPGNIAVDD-VNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~-~~~g~I~LlDFGlv~~L 493 (773)
.++|+|||+||+|+|..- ..-.++.+||||+++.+
T Consensus 129 ~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 129 LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 999999999999999852 12468999999999876
No 128
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.40 E-value=6.9e-13 Score=136.71 Aligned_cols=185 Identities=18% Similarity=0.241 Sum_probs=119.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|+.||+|+....-... .... .
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~----------------------------------~~~~------~ 44 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE----------------------------------EERE------E 44 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH----------------------------------HHHH------H
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc----------------------------------cccc------h
Confidence 5799999999999999 57899999984432111 0000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
...|+..+.++. ++++.-..-+.......+++|||++|.+|.++.. .....+...+...+.+ ..+..+|..|
T Consensus 45 ~~~e~~~~~~l~-----~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~ 118 (260)
T PF00069_consen 45 NIREIKILRRLR-----HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG 118 (260)
T ss_dssp HHHHHHHHHHHT-----BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhcccccc-----cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 112555555552 2333322333333677799999999999988764 2333444444443333 3478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||+++. ++.++|+|||.+..++..... .....++..+.+++... ........|.+++...+.
T Consensus 119 i~H~dikp~NIl~~~--~~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 190 (260)
T PF00069_consen 119 IVHRDIKPENILLDE--NGEVKLIDFGSSVKLSENNEN------FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY 190 (260)
T ss_dssp EEESSBSGGGEEEST--TSEEEESSGTTTEESTSTTSE------BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred ccccccccccccccc--ccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccc
Confidence 999999999999985 899999999998754111100 00112344556666665 555666779999888776
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 191 ~l~~ 194 (260)
T PF00069_consen 191 ELLT 194 (260)
T ss_dssp HHHH
T ss_pred cccc
Confidence 6553
No 129
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=1.5e-12 Score=143.06 Aligned_cols=186 Identities=17% Similarity=0.169 Sum_probs=123.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|.-|+||+|+. .++.||||+. + +...-+++ -.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~i--n--------------------------------LEkc~~~l-------d~ 70 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKII--N--------------------------------LEKCNNDL-------DA 70 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEe--e--------------------------------hhhhhhhH-------HH
Confidence 5699998899999998 6899999987 1 11111111 02
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHH--HHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVES--YLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~-l~~~~~d~~~la~~li~~--~l~qI~~~ 460 (773)
.++|.+++..+ ++|+|.--..-.-.....|+||-|+.|+++.++.. .-..|++...++..+-+. .|.++|.+
T Consensus 71 l~kE~~~msl~-----~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~ 145 (516)
T KOG0582|consen 71 LRKEVQTMSLI-----DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN 145 (516)
T ss_pred HHHHHHHhhhc-----CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 35667776655 34544322222223456799999999999999754 334567777666655443 38889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH--cCCCCCCCChHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ--MGVLVPTGDTTAVRRT 538 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~--lG~~~~~~D~~~l~~~ 538 (773)
|.+|||+|+|||||+. +|.++|.|||....+-..--+.-.++ .-+.+.+.+|+++.+. .--..-..|+++|.-.
T Consensus 146 G~IHRdvKAgnILi~~--dG~VkLadFgvsa~l~~~G~R~~~rf--~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGIT 221 (516)
T KOG0582|consen 146 GHIHRDVKAGNILIDS--DGTVKLADFGVSASLFDSGDRQVTRF--NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGIT 221 (516)
T ss_pred CceecccccccEEEcC--CCcEEEcCceeeeeecccCceeeEee--ccccCcccccChHHhhhcccCccchhhhhhhhHH
Confidence 9999999999999986 99999999998887644322222222 3345677777777632 2122345677777655
Q ss_pred HHH
Q 004115 539 AQF 541 (773)
Q Consensus 539 i~~ 541 (773)
+-+
T Consensus 222 A~E 224 (516)
T KOG0582|consen 222 ACE 224 (516)
T ss_pred HHH
Confidence 443
No 130
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.40 E-value=3e-12 Score=134.49 Aligned_cols=186 Identities=16% Similarity=0.160 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEeec--C-----eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK--G-----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~--G-----~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|... + ..|++|..+...... ..
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~-----------------------------------~~--- 52 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK-----------------------------------VQ--- 52 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH-----------------------------------HH---
Confidence 67999999999999982 2 579999874322110 01
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRK 443 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d~~ 443 (773)
-+|.+|.+.+.++. ++++.-..-+.......+++|||++|++|.++..... ...+..
T Consensus 53 ---~~~~~ei~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (283)
T cd05048 53 ---QEFRQEAELMSDLQ-----HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124 (283)
T ss_pred ---HHHHHHHHHHHhcC-----CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHH
Confidence 12445555554442 2332222222223456799999999999988653221 112333
Q ss_pred HHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 444 RLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 444 ~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
.+...+ +...+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... .....+..+++++..
T Consensus 125 ~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~L~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~ 198 (283)
T cd05048 125 DFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYSADYYRVQ----SKSLLPVRWMPPEAI 198 (283)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC--CCcEEECCCcceeecccccccccc----CCCcccccccCHHHh
Confidence 333322 233468899999999999999999985 789999999999876432211100 001123456777777
Q ss_pred HcCCCCCCCChHHHHHHHHHHH
Q 004115 522 QMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 522 ~lG~~~~~~D~~~l~~~i~~~l 543 (773)
..+...+..|++++...+++++
T Consensus 199 ~~~~~~~~sDv~slG~il~el~ 220 (283)
T cd05048 199 LYGKFTTESDIWSFGVVLWEIF 220 (283)
T ss_pred ccCcCchhhhHHHHHHHHHHHH
Confidence 6666777789999988777665
No 131
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.39 E-value=2.6e-12 Score=133.89 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=116.5
Q ss_pred cccccccceeEEEEEee--cCe---eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGE---EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~---~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
.+.||.|++|+||+|++ +|+ .|+||..+++....
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------------- 48 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEK----------------------------------------- 48 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHH-----------------------------------------
Confidence 36899999999999998 343 79999875442111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
..-+|..|++.+.++. +..-+.+...+ ......+++|||++|.+|.++........+...+.... +...+..+
T Consensus 49 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 49 QRQDFLSEASIMGQFS----HHNIIRLEGVV-TKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred HHHHHHHHHHHHhcCC----CCCeeEEEEEE-ccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0113445554443332 21112222222 23345799999999999988754332233444333332 23446889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|+||.||++++ ++.++++|||+...+.......... ........++.++....+......|++++.-
T Consensus 124 H~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ 198 (268)
T cd05063 124 SDMNYVHRDLAARNILVNS--NLECKVSDFGLSRVLEDDPEGTYTT---SGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 198 (268)
T ss_pred HHCCeeccccchhhEEEcC--CCcEEECCCccceecccccccceec---cCCCcCceecCHHHhhcCCcChHhHHHHHHH
Confidence 9999999999999999985 7899999999998775433221110 0001122345566655555566789998887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+++++
T Consensus 199 il~ell 204 (268)
T cd05063 199 VMWEVM 204 (268)
T ss_pred HHHHHH
Confidence 665543
No 132
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.39 E-value=3.1e-12 Score=132.96 Aligned_cols=183 Identities=16% Similarity=0.131 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.+ +++.||||..+++-.. +-+|
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------------~~~~ 48 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-------------------------------------------PKDF 48 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc-------------------------------------------HHHH
Confidence 7899999999999998 6788999987543110 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
.+|...+.++. ++++.-..-+.......+++|||++|++|.++..... ...+...+...+.+ ..+..+|..|
T Consensus 49 ~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 49 LAEAQIMKKLR-----HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred HHHHHHHHHCC-----CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55665555543 2333222222334456799999999999998753222 22444444443322 3367889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||+||++++ ++.++++|||++..+......... + ......+++++....+......|.+++...+.+
T Consensus 124 i~H~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~----~-~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 124 YIHRDLAARNVLVGE--NNICKVADFGLARVIKEDIYEARE----G-AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred eeeccCCcceEEEcC--CCCEEECCcceEEEccCCcccccC----C-CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 789999999999887633211100 0 001123455555555555667899999877766
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 197 l~ 198 (261)
T cd05068 197 IV 198 (261)
T ss_pred HH
Confidence 54
No 133
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.39 E-value=9.9e-13 Score=150.35 Aligned_cols=186 Identities=17% Similarity=0.192 Sum_probs=116.0
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|+||||-+|.. +|+.|||||.+-... |..+-
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-------------------------------------f~~Q~---- 229 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-------------------------------------FLRQA---- 229 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChH-------------------------------------HHHHH----
Confidence 47899999999999999 699999999853211 00111
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI 457 (773)
..|.+-++++.+.- ......+-+.|. .+....+||.|.+ +..|.++.... ..|+....+.... +-..|..+
T Consensus 230 --~~Ei~iL~~ln~~d-~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L 305 (586)
T KOG0667|consen 230 --QIEIRILELLNKHD-PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFL 305 (586)
T ss_pred --HHHHHHHHHHhccC-CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12333344444311 112233334443 3456779999998 45777765432 2344443332222 22346678
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
++.|++|||+||+|||+.+.....|++||||.+...++..- ..+..-.-+-| +.++.+.+ ....|+++|.-
T Consensus 306 ~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy----tYiQSRfYRAP----EVILGlpY-~~~IDmWSLGC 376 (586)
T KOG0667|consen 306 HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY----TYIQSRFYRAP----EVILGLPY-DTAIDMWSLGC 376 (586)
T ss_pred HhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce----eeeeccccccc----hhhccCCC-CCccceeehhh
Confidence 89999999999999999875567899999999998877543 22223223333 33343333 45679999998
Q ss_pred HHHHHHH
Q 004115 538 TAQFFLN 544 (773)
Q Consensus 538 ~i~~~l~ 544 (773)
++.++..
T Consensus 377 IlAEL~t 383 (586)
T KOG0667|consen 377 ILAELFT 383 (586)
T ss_pred hHHhHhc
Confidence 8776654
No 134
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.39 E-value=6.5e-12 Score=122.65 Aligned_cols=180 Identities=18% Similarity=0.228 Sum_probs=117.1
Q ss_pred ccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||+|++|+||+++.. |++++||+.+++.... .+-.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----------------------------------------~~~~~~ 39 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-----------------------------------------LLEELL 39 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-----------------------------------------HHHHHH
Confidence 689999999999994 9999999986543211 112345
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+|.+.+.++.+ + .+|.++. ......+++|||++|.+|.++........+...+...+ +...+..+|..|
T Consensus 40 ~e~~~~~~l~~-----~--~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 112 (215)
T cd00180 40 REIEILKKLNH-----P--NIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG 112 (215)
T ss_pred HHHHHHHhcCC-----C--CeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55555555533 2 3444443 33357899999999999998754332234444433333 223468899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|+||++++ .+++++++|||.+........ ..........++.+.....+ ......|.+++...+.
T Consensus 113 ~~H~dl~~~ni~~~~-~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~ 185 (215)
T cd00180 113 IIHRDLKPENILLDS-DNGKVKLADFGLSKLLTSDKS------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILY 185 (215)
T ss_pred eeccCCCHhhEEEeC-CCCcEEEecCCceEEccCCcc------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHH
Confidence 999999999999984 258999999999998876542 00111233344444444444 4455678888776554
Q ss_pred HH
Q 004115 541 FF 542 (773)
Q Consensus 541 ~~ 542 (773)
++
T Consensus 186 ~l 187 (215)
T cd00180 186 EL 187 (215)
T ss_pred HH
Confidence 43
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.39 E-value=3e-12 Score=132.60 Aligned_cols=191 Identities=15% Similarity=0.050 Sum_probs=119.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|+||+|.. +|++|+||+.+...... ... .+--
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~------------------------------~~~-------~~~~ 49 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSP------------------------------ETK-------KEVN 49 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccch------------------------------hhH-------HHHH
Confidence 36899999999999998 68999999875432111 000 0011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~---la~~li~~~l~qI~~ 459 (773)
++.+|++.+.++. ++++.-..-+.+.....+++|||++|.+|.++.... ....... ++..+ ...+..+|.
T Consensus 50 ~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l-~~~l~~lH~ 122 (263)
T cd06625 50 ALECEIQLLKNLQ-----HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQI-LEGVEYLHS 122 (263)
T ss_pred HHHHHHHHHHhCC-----CCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHH-HHHHHHHHh
Confidence 3455655555442 344433333334455789999999999998864321 1122222 22222 234678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|+||+||+++. +++++|+|||++..+......... .....+...++++++..-.......|++++...+
T Consensus 123 ~~i~H~dl~p~nilv~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (263)
T cd06625 123 NMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGTG---MKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTV 197 (263)
T ss_pred CCeecCCCCHHHEEEcC--CCCEEEeecccceecccccccccc---ccCCCcCccccCcceeccCCCCchhhhHHHHHHH
Confidence 99999999999999985 789999999999876543211100 0011223345555555544455678999998877
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 198 ~el~~ 202 (263)
T cd06625 198 VEMLT 202 (263)
T ss_pred HHHHh
Confidence 66553
No 136
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39 E-value=3.8e-12 Score=124.14 Aligned_cols=132 Identities=23% Similarity=0.339 Sum_probs=97.2
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.+|++.|..++||+++..|+.|++|+..++.. ...++
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------------------------------------------~~~~~ 39 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------------------------------------------LLINR 39 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-------------------------------------------cccCH
Confidence 36899999999999999999999998754321 01245
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC---
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG--- 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~G--- 461 (773)
..|++++..+.+. ..+|+++....+..+++|||++|.++.+.. ..++ ..... +...+..+|..+
T Consensus 40 ~~E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-----~~~~-~~~~~-l~~~l~~LH~~~~~~ 106 (170)
T cd05151 40 ENEAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-----FSDP-ENLEK-IAKLLKKLHSSPLPD 106 (170)
T ss_pred HHHHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-----ccCH-HHHHH-HHHHHHHHhCCCCCC
Confidence 6788888777652 236888887776789999999999887531 0111 22222 334567788777
Q ss_pred --CccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 462 --FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 462 --ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
++|+|+||+||+++ +++++++|||.++.-++
T Consensus 107 ~~~~HgD~~~~Nil~~---~~~~~liDf~~a~~~~~ 139 (170)
T cd05151 107 LVPCHNDLLPGNFLLD---DGRLWLIDWEYAGMNDP 139 (170)
T ss_pred ceeecCCCCcCcEEEE---CCeEEEEecccccCCCh
Confidence 59999999999997 56899999999886543
No 137
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.39 E-value=2.8e-12 Score=155.35 Aligned_cols=192 Identities=18% Similarity=0.134 Sum_probs=121.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+...... ... .-+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~---------------------------------e~~------~~r 48 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN---------------------------------PLL------KKR 48 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC---------------------------------HHH------HHH
Confidence 6799999999999998 58999999885432211 001 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhh-h---------cCCCHHHHHHH--HH
Q 004115 384 YTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLD-E---------LGVDRKRLGRY--AV 450 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~---------~~~d~~~la~~--li 450 (773)
|.+|++.+.++. ++++. +..++ ......+++|||++|++|.++.... . ...+...+... .+
T Consensus 49 flrEi~ILs~L~-----HPNIVkl~~v~-~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QI 122 (932)
T PRK13184 49 FLREAKIAADLI-----HPGIVPVYSIC-SDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122 (932)
T ss_pred HHHHHHHHHhCC-----CcCcCeEEEEE-eeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHH
Confidence 555665554442 23322 22222 2345679999999999998865321 0 01111222222 12
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-----------HHH-HHHHhhcCHHHHHH
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------LEA-FYGIYEKDADKVLQ 518 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l-----------~~l-~~al~~~D~~~i~~ 518 (773)
...+..+|..|++|+|+||+||+++. ++.++++|||++..+........ ..+ ...-..+++.++++
T Consensus 123 a~AL~yLHs~GIIHRDLKPeNILLd~--dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 123 CATIEYVHSKGVLHRDLKPDNILLGL--FGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHCCccccCCchheEEEcC--CCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 34478899999999999999999985 88999999999987732111000 000 00112356677888
Q ss_pred HHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 519 AMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 519 ~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+...-+......|++++...+.+++.
T Consensus 201 E~l~g~~~S~kSDIWSLGVILyELLT 226 (932)
T PRK13184 201 ERLLGVPASESTDIYALGVILYQMLT 226 (932)
T ss_pred HHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence 87765556667899999988877764
No 138
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.39 E-value=4.2e-12 Score=131.26 Aligned_cols=186 Identities=18% Similarity=0.193 Sum_probs=117.6
Q ss_pred ccccccceeEEEEEee-c--C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~--G--~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||+|++|.||+|.+ + | ..||||+.+++... +.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~------ 39 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-----------------------------------DI------ 39 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-----------------------------------HH------
Confidence 3689999999999998 2 3 36999988554321 00
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI 457 (773)
.-+|.+|.+.+.++. +..-+.+...+.+ ...+++|||++|++|.+...... ...+...+...+ +...+..+
T Consensus 40 ~~~~~~e~~~l~~l~----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l 113 (257)
T cd05040 40 MDDFLKEAAIMHSLD----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113 (257)
T ss_pred HHHHHHHHHHHhhcC----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH
Confidence 113444555444442 2112233333333 66799999999999998653322 223433333322 23346788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|+||.||+++. ++.++++|||++..+.......... ........++.++...........|++++.-
T Consensus 114 H~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~ 188 (257)
T cd05040 114 ESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRALPQNEDHYVME---EHLKVPFAWCAPESLRTRTFSHASDVWMFGV 188 (257)
T ss_pred HhCCccccccCcccEEEec--CCEEEeccccccccccccccceecc---cCCCCCceecCHHHhcccCcCchhhhHHHHH
Confidence 9999999999999999986 7899999999998875532110000 0112234456666665555666789999987
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 189 ~l~el~ 194 (257)
T cd05040 189 TLWEMF 194 (257)
T ss_pred HHHHHH
Confidence 766654
No 139
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.39 E-value=2.1e-12 Score=141.92 Aligned_cols=189 Identities=17% Similarity=0.196 Sum_probs=114.9
Q ss_pred hhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 299 VFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 299 iF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
+...|. .+.||+|++|.||+|+. .++.||||+........ +..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~ 67 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ----------------------------------THA 67 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc----------------------------------hhH
Confidence 334454 37899999999999998 68999999874321110 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH-
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA- 449 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l- 449 (773)
-++.+|...+..+. +..-+.+..++. +.....++||||++|. +.+... ...+...+...+
T Consensus 68 ------~~~~~E~~~l~~l~----h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~ 133 (364)
T cd07875 68 ------KRAYRELVLMKCVN----HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ---MELDHERMSYLLY 133 (364)
T ss_pred ------HHHHHHHHHHHhcC----CCCccccceeecccccccccCeEEEEEeCCCCC-HHHHHH---hcCCHHHHHHHHH
Confidence 11223333333322 111122222221 1123469999999874 443321 123333332222
Q ss_pred -HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004115 450 -VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 528 (773)
Q Consensus 450 -i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~ 528 (773)
+...+..+|..|++|+|+||.||+++. ++.++|+|||++......... .-..+...++++++..-....+
T Consensus 134 qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~ 204 (364)
T cd07875 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKE 204 (364)
T ss_pred HHHHHHHHHhhCCeecCCCCHHHEEECC--CCcEEEEeCCCccccCCCCcc-------cCCcccCCcCCHHHHhCCCCCc
Confidence 234578899999999999999999985 889999999999876543210 0112345566677666555667
Q ss_pred CCChHHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFLN 544 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l~ 544 (773)
..|++++...+++++.
T Consensus 205 ~~DiwSlG~il~ell~ 220 (364)
T cd07875 205 NVDIWSVGCIMGEMIK 220 (364)
T ss_pred hhhHHhHHHHHHHHHh
Confidence 7899999988777653
No 140
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.38 E-value=4.2e-12 Score=132.44 Aligned_cols=185 Identities=13% Similarity=0.094 Sum_probs=117.2
Q ss_pred cccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.||.|++|.||+|++ ++..||||+..+..... .. -
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~-----------------------------------~~------~ 40 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKS-----------------------------------VR------D 40 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChH-----------------------------------HH------H
Confidence 389999999999987 25679999875432111 00 1
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+|.+|+.-+.++. +..-+.+..++ .....++||||++|++|.++........+...+...+.+ ..+..+|..
T Consensus 41 ~~~~E~~~l~~l~----h~~ii~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 114 (257)
T cd05115 41 EMMREAEIMHQLD----NPYIVRMIGVC--EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK 114 (257)
T ss_pred HHHHHHHHHHhcC----CCCeEEEEEEE--cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555554442 22222233322 134579999999999999875433334455544443333 336778999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||+||+++. ++.++++|||++..+......... . ........+++++....+......|++++...+.
T Consensus 115 ~i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~-~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05115 115 NFVHRDLAARNVLLVN--QHYAKISDFGLSKALGADDSYYKA-R--SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMW 189 (257)
T ss_pred CeeecccchheEEEcC--CCcEEeccCCccccccCCccceec-c--CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999999999985 789999999998866543221100 0 0001123456666666666667789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 190 el~ 192 (257)
T cd05115 190 EAF 192 (257)
T ss_pred HHh
Confidence 554
No 141
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.38 E-value=4.4e-12 Score=131.91 Aligned_cols=195 Identities=16% Similarity=0.118 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|+||+|.. +++.||+|+........- ...-..++.+ +
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~---------------------------~~~~~~~~~~------~ 52 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSAS---------------------------SKDRKRSMLD------A 52 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccc---------------------------hhHHHHHHHH------H
Confidence 5799999999999998 589999998743321110 0000111212 3
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|+..+.++. +++ +++++ .......+++|||++|.+|.++.... ...+...+...+ +...+..+|.
T Consensus 53 ~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~ 124 (267)
T cd06628 53 LAREIALLKELQ-----HEN--IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHN 124 (267)
T ss_pred HHHHHHHHHhcC-----CCC--eeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHh
Confidence 444444444442 232 22222 22345679999999999998875322 122332222222 2234678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||++++ ++.+++.|||++..+.......-.........+...++.++...-+......|++++...+
T Consensus 125 ~~ivH~di~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il 202 (267)
T cd06628 125 RGIIHRDIKGANILVDN--KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLV 202 (267)
T ss_pred cCcccccCCHHHEEEcC--CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHH
Confidence 99999999999999985 8899999999998775321100000000011233445566666555556678999988777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 203 ~~l~ 206 (267)
T cd06628 203 VEML 206 (267)
T ss_pred HHHh
Confidence 6655
No 142
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.38 E-value=5.9e-12 Score=130.09 Aligned_cols=183 Identities=14% Similarity=0.075 Sum_probs=117.0
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||+|++|+||+|.+ +++.+|||+.+.+... +-+|
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~-------------------------------------------~~~~ 46 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-------------------------------------------EEDF 46 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC-------------------------------------------HHHH
Confidence 6799999999999998 6889999987432210 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~Gf 462 (773)
..|.+.+.++. ++++.-..-+.......+++|||++|++|.++............+..... ...+..+|..|+
T Consensus 47 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 121 (256)
T cd05112 47 IEEAQVMMKLS-----HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121 (256)
T ss_pred HHHHHHHHhCC-----CCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 55666555542 23222111122334567999999999999887543322234333333322 234677899999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|+||+++. ++.++++|||++..+........ ........+++++...-+......|++++...+.++
T Consensus 122 ~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el 194 (256)
T cd05112 122 IHRDLAARNCLVGE--NQVVKVSDFGMTRFVLDDQYTSS-----TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred cccccccceEEEcC--CCeEEECCCcceeecccCccccc-----CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHH
Confidence 99999999999985 78999999999887643311000 000112345556655555566678899888766654
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 195 ~ 195 (256)
T cd05112 195 F 195 (256)
T ss_pred H
Confidence 4
No 143
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.38 E-value=4.7e-12 Score=130.48 Aligned_cols=187 Identities=20% Similarity=0.211 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.+ +|+.|++|+.+..... +. .-.|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-----------------------------------~~------~~~~ 39 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-----------------------------------DL------KRKF 39 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-----------------------------------HH------HHHH
Confidence 3689999999999999 5899999976432110 00 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~Gf 462 (773)
.+|.+.+.++ +++++.-...+.......++||||++|.++.++........+...+...... ..+..+|..|+
T Consensus 40 ~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 114 (251)
T cd05041 40 LQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC 114 (251)
T ss_pred HHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4455444433 2233332222333446679999999999998875433233444444433322 34678999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|.||+++. ++.++++|||++......... ... ........++.++....+......|.+++...++++
T Consensus 115 ~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~~~~-~~~---~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l 188 (251)
T cd05041 115 IHRDLAARNCLVGE--NNVLKISDFGMSREEEGGIYT-VSD---GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWET 188 (251)
T ss_pred ehhhcCcceEEEcC--CCcEEEeeccccccccCCcce-ecc---ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHH
Confidence 99999999999985 789999999999876522100 000 000112235556665556667778999998877765
Q ss_pred HH
Q 004115 543 LN 544 (773)
Q Consensus 543 l~ 544 (773)
+.
T Consensus 189 ~t 190 (251)
T cd05041 189 FS 190 (251)
T ss_pred Hh
Confidence 53
No 144
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.38 E-value=5.5e-12 Score=129.60 Aligned_cols=183 Identities=17% Similarity=0.187 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEeec--C----eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK--G----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~--G----~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.+|.|++|+||+|+.. + ..||+|+.+++....
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 43 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ----------------------------------------- 43 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-----------------------------------------
Confidence 57999999999999993 3 889999986543211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcC-CCHHHHHHHHHH--HHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYAVE--SYL 454 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~-~d~~~la~~li~--~~l 454 (773)
..-++..|.+.+..+ +++++ ++.+. ......+++|||++|.+|.++....... .+...+...+.+ ..+
T Consensus 44 ~~~~~~~e~~~l~~l-----~~~~i--~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l 116 (258)
T smart00219 44 QIEEFLREARIMRKL-----DHPNI--VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGM 116 (258)
T ss_pred HHHHHHHHHHHHHhc-----CCCch--heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Confidence 011334444444433 22332 23332 2235689999999999998875432222 444444333322 346
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
..+|..|++|+|++|+||++++ ++.++++|||++.......- +.. ......+.++.++....+......|+++
T Consensus 117 ~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~s 189 (258)
T smart00219 117 EYLESKNFIHRDLAARNCLVGE--NLVVKISDFGLSRDLYDDDY--YKK---KGGKLPIRWMAPESLKDGKFTSKSDVWS 189 (258)
T ss_pred HHHhcCCeeecccccceEEEcc--CCeEEEcccCCceecccccc--ccc---ccCCCcccccChHHhccCCCCcchhHHH
Confidence 7889999999999999999985 78999999999987765411 000 0011223455566555566677789999
Q ss_pred HHHHHHHHH
Q 004115 535 VRRTAQFFL 543 (773)
Q Consensus 535 l~~~i~~~l 543 (773)
+...+.+++
T Consensus 190 lG~i~~~l~ 198 (258)
T smart00219 190 FGVLLWEIF 198 (258)
T ss_pred HHHHHHHHH
Confidence 887666554
No 145
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.38 E-value=6.7e-12 Score=128.65 Aligned_cols=184 Identities=15% Similarity=0.116 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|.||+|+. +|+.|+||...+.... +.... +
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK----------------------------------EEALK------S 45 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC----------------------------------HHHHH------H
Confidence 6899999999999998 5889999988433110 00011 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~G 461 (773)
+..|++.+.++. ++++.-+.-+.......+++|||++|.+|.++.... ...+...+...+. ...+..+|..|
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 46 IMQEIDLLKNLK-----HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHhCC-----CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 344444444432 233222221223345679999999999998865322 2334443333322 23367899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|+||+++. ++.+++.|||++..+...... .....++..++.++...........|++++...+.+
T Consensus 120 i~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~ 191 (254)
T cd06627 120 VIHRDIKAANILTTK--DGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIE 191 (254)
T ss_pred cccCCCCHHHEEECC--CCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHH
Confidence 999999999999985 789999999999988765432 111234556666766655555667899988877665
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 192 l~ 193 (254)
T cd06627 192 LL 193 (254)
T ss_pred HH
Confidence 54
No 146
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.38 E-value=5e-12 Score=131.06 Aligned_cols=183 Identities=14% Similarity=0.100 Sum_probs=116.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|++ ++..||+|..+.+-. .+-+|
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-------------------------------------------~~~~~ 46 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-------------------------------------------SEEDF 46 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc-------------------------------------------cHHHH
Confidence 5699999999999999 677899997632210 01245
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
.+|+.-+.++. ++++.-..-+.+.....++||||++|++|.++........+...+...+ +...+..+|..|+
T Consensus 47 ~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05114 47 IEEAKVMMKLS-----HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121 (256)
T ss_pred HHHHHHHHHCC-----CCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 55655555542 2333222222234456799999999999988654322223444333332 2244678999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|+||++++ ++.+++.|||.+..+.......- ........+++++...........|.+++...+.++
T Consensus 122 ~H~dl~p~ni~i~~--~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el 194 (256)
T cd05114 122 IHRDLAARNCLVSS--TGVVKVSDFGMTRYVLDDEYTSS-----SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred cccccCcceEEEcC--CCeEEECCCCCccccCCCceecc-----CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHH
Confidence 99999999999985 78999999999887643221100 001112345556655544455668999888766655
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 195 ~ 195 (256)
T cd05114 195 F 195 (256)
T ss_pred H
Confidence 4
No 147
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.38 E-value=6.1e-12 Score=132.30 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=118.8
Q ss_pred hhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004115 297 DDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 374 (773)
Q Consensus 297 ~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 374 (773)
+++|... +.||+|++|.||+|.. +|+.||||+.......
T Consensus 3 ~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~------------------------------------- 43 (277)
T cd06641 3 EELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE------------------------------------- 43 (277)
T ss_pred HHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccch-------------------------------------
Confidence 4455433 4699999999999987 6899999986211000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--
Q 004115 375 ASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE-- 451 (773)
Q Consensus 375 ~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~-- 451 (773)
...-++.+|...+.++. ++++ .+...+ ......++||||++|+++.++.. ....+...+...+.+
T Consensus 44 ----~~~~~~~~e~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~ 111 (277)
T cd06641 44 ----DEIEDIQQEITVLSQCD-----SPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREIL 111 (277)
T ss_pred ----HHHHHHHHHHHHHHhcC-----CCCEeEEEEEE-EeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHH
Confidence 00123455555554442 2332 222222 33456799999999999988643 223444444443322
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|++|+||+++. ++.++++|||++..+....... ....+...++.++....+...+..|
T Consensus 112 ~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~D 183 (277)
T cd06641 112 KGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDSKAD 183 (277)
T ss_pred HHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccceecccchhhh------ccccCCccccChhhhccCCCCchhh
Confidence 3367789999999999999999985 7899999999998776532111 1112333445555555455556678
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
.+++...+.+++
T Consensus 184 v~slG~~l~~l~ 195 (277)
T cd06641 184 IWSLGITAIELA 195 (277)
T ss_pred HHHHHHHHHHHH
Confidence 888877665543
No 148
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.38 E-value=3.3e-12 Score=136.36 Aligned_cols=181 Identities=18% Similarity=0.141 Sum_probs=117.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||.....-... .-.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------------~~~ 62 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK------------------------------------------KEL 62 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccch------------------------------------------HHH
Confidence 6799999999999997 69999999763211000 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
+..|...+..+ +++++.-+.-+.......++||||++|.++.++... ...+...+...+.+ ..+..+|..|
T Consensus 63 ~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~ 135 (297)
T cd06656 63 IINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQ 135 (297)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33444333332 223332222222345567999999999999987532 22343444333222 3467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.++++|||.+..+.+..... ....+.+.++.++....+...+..|++++...+++
T Consensus 136 i~H~dL~p~Nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~ 207 (297)
T cd06656 136 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (297)
T ss_pred cccCCCCHHHEEECC--CCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 999999999999985 8899999999998776543211 11124455666666665555677899998877666
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 208 l~ 209 (297)
T cd06656 208 MV 209 (297)
T ss_pred HH
Confidence 54
No 149
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.38 E-value=2.5e-12 Score=137.56 Aligned_cols=189 Identities=17% Similarity=0.107 Sum_probs=112.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.++.|++|.||+|+. .++.|+||...++.... .+. .-+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------------~~~------~~~ 47 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL---------------------------------RNQ------IQQ 47 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh---------------------------------HHH------HHH
Confidence 6799999999999998 58999999764321000 000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~--~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|.+.+..+. ++ .+++++..+++. .++||||++|++|.++.... .......+...+ +...+..+|.
T Consensus 48 ~~~e~~~l~~~~-----~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~ 119 (305)
T cd05609 48 VFVERDILTFAE-----NP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHN 119 (305)
T ss_pred HHHHHHHHHhCC-----CC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344444343322 23 455666554444 49999999999998875322 122222222211 2245788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHH---------HHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL---------EAFYGIYEKDADKVLQAMVQMGVLVPTG 530 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~---------~l~~al~~~D~~~i~~~l~~lG~~~~~~ 530 (773)
.|++|+|+||+||+++. ++.++++|||+++.........+. ........+...+++++...-+...+..
T Consensus 120 ~~i~H~dl~p~NIll~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 197 (305)
T cd05609 120 YGIVHRDLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPV 197 (305)
T ss_pred CCccccCCchHHEEECC--CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchh
Confidence 99999999999999985 889999999987632111000000 0000001123344555544444556678
Q ss_pred ChHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFL 543 (773)
Q Consensus 531 D~~~l~~~i~~~l 543 (773)
|.+++...+.+++
T Consensus 198 Di~slG~vl~el~ 210 (305)
T cd05609 198 DWWAMGIILYEFL 210 (305)
T ss_pred hHHHHHHHHHHHH
Confidence 9999887666554
No 150
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.38 E-value=2e-12 Score=139.53 Aligned_cols=187 Identities=17% Similarity=0.180 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+...... .....
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------~~~~~ 45 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV----------------------------------------SDATR 45 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc----------------------------------------hhHHH
Confidence 5799999999999998 68999999874211100 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccC----CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYT----TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~s----t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~q 456 (773)
+.+|++.+.++. +++ +.+..++.... ...++||||++| .+.++... ....+...+...+ +...+..
T Consensus 46 ~~~E~~~l~~l~-----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~ 118 (338)
T cd07859 46 ILREIKLLRLLR-----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKA-NDDLTPEHHQFFLYQLLRALKY 118 (338)
T ss_pred HHHHHHHHHhCC-----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHh-cccCCHHHHHHHHHHHHHHHHH
Confidence 455665555543 222 22222222111 236999999965 66664321 1223433333322 3344788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCChHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDTTA 534 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l--G~~~~~~D~~~ 534 (773)
+|+.|++|+|+||.||+++. ++.++|+|||++.......... ....-..+...++++++..- +...+..|+++
T Consensus 119 LH~~~ivH~dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 119 IHTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred HHHCCeecCCCCHHHeEECC--CCcEEEccCccccccccccCcc---ccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 99999999999999999985 8999999999998653221111 00011124455666776543 44566789999
Q ss_pred HHHHHHHHHH
Q 004115 535 VRRTAQFFLN 544 (773)
Q Consensus 535 l~~~i~~~l~ 544 (773)
+...+++++.
T Consensus 194 lGvvl~el~t 203 (338)
T cd07859 194 IGCIFAEVLT 203 (338)
T ss_pred HHHHHHHHHc
Confidence 9988777653
No 151
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.38 E-value=2.9e-12 Score=137.95 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=115.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-+|.|++|.||+|+. +|+.||+|.+|-..++. -.| ....+|+.
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-----------------G~P-----------------~taiREis 62 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-----------------GVP-----------------STAIREIS 62 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEecccccc-----------------CCC-----------------chhhHHHH
Confidence 3499999999999998 79999999985433210 011 12334555
Q ss_pred HHHHHHHHHHHHHhcCCCC-ccccceeeeccC-----CCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHHH---
Q 004115 384 YTQEAANAELFASNFKDMD-YVKVPTIFWEYT-----TPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE--- 451 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~-~V~vP~v~~e~s-----t~~vLVMEyieG~~L~d~~~l~~---~~~d~~~la~~li~--- 451 (773)
+.++.+ +.. -+..-.++...+ +..+||+||++- +|.++..... .+.+. .+....+.
T Consensus 63 llk~L~----------~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~-~~ik~~m~Qll 130 (323)
T KOG0594|consen 63 LLKRLS----------HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPP-RLIKSFMRQLL 130 (323)
T ss_pred HHHHhC----------CCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCH-HHHHHHHHHHH
Confidence 544432 111 233334443333 266899999975 5555433222 34554 22332222
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|++|++|||+||.||+|++ +|.++++|||+++.++-..+. +..-+..+.-+-++- ++.--...+..|
T Consensus 131 ~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEv----LlGs~~Ys~~vD 203 (323)
T KOG0594|consen 131 RGLAFLHSHGILHRDLKPQNLLISS--SGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEV----LLGSTSYSTSVD 203 (323)
T ss_pred HHHHHHHhCCeecccCCcceEEECC--CCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHH----hcCCCcCCCCcc
Confidence 2256689999999999999999996 899999999999977744443 222222333344443 333334567789
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++.-.+.+++
T Consensus 204 iWs~GcIfaEm~ 215 (323)
T KOG0594|consen 204 IWSLGCIFAEMF 215 (323)
T ss_pred hHhHHHHHHHHH
Confidence 999987766554
No 152
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.38 E-value=7.4e-12 Score=132.49 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=113.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||+|++|.||+|.. +|+.||||+.++.....-. .+..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------------~~~~~ 41 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---------------------------------------GETLA 41 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccch---------------------------------------HHHHH
Confidence 479999999999998 5899999988543211100 00011
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|.. +.++.... +++.+ +..+. ......++||||++|++|.++.... ..+....+...+ +...+..+|..
T Consensus 42 ~~~~~-~~~~~~~~-~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~ 116 (279)
T cd05633 42 LNERI-MLSLVSTG-DCPFI--VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNR 116 (279)
T ss_pred HHHHH-HHHHHhhC-CCCcE--eEEEEEEecCCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 12221 11111111 22333 33332 2345679999999999998764321 223434333332 22347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i 539 (773)
|++|+|+||+||+++. ++.++++|||++..++..... ...+...+++++...-+ ......|.+++...+
T Consensus 117 ~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 186 (279)
T cd05633 117 FVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCML 186 (279)
T ss_pred CcCCCCCCHHHEEECC--CCCEEEccCCcceeccccCcc--------CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHH
Confidence 9999999999999985 789999999998766543211 11345556666665433 245567999988776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 187 ~~l~ 190 (279)
T cd05633 187 FKLL 190 (279)
T ss_pred HHHH
Confidence 6654
No 153
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.38 E-value=2.4e-12 Score=137.89 Aligned_cols=183 Identities=13% Similarity=0.074 Sum_probs=111.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|+. +++.||||+.+...... .+.
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~ 49 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-----------------------------------------APC 49 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-----------------------------------------cch
Confidence 36799999999999998 68899999874322110 001
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
.+.+|...+.++. ++++ .+-..+ ......++||||+++ .+.+.........+...+... .+...+..+|.
T Consensus 50 ~~~~E~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~ 122 (309)
T cd07872 50 TAIREVSLLKDLK-----HANIVTLHDIV-HTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR 122 (309)
T ss_pred hHHHHHHHHHhCC-----CCCcceEEEEE-eeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2334554444442 2332 222222 334567999999987 555543222222333333222 23344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~~~ 538 (773)
.|++|+|+||+||+++. ++.++++|||++............ ......+++++... .+......|++++...
T Consensus 123 ~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 194 (309)
T cd07872 123 RKVLHRDLKPQNLLINE--RGELKLADFGLARAKSVPTKTYSN------EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCI 194 (309)
T ss_pred CCeecCCCCHHHEEECC--CCCEEECccccceecCCCcccccc------ccccccccCCHHHhCCCCCCcHHHHHHHHHH
Confidence 99999999999999985 789999999998765432211000 01233445555443 2334456788888877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 195 l~el~ 199 (309)
T cd07872 195 FFEMA 199 (309)
T ss_pred HHHHH
Confidence 76655
No 154
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.37 E-value=5.1e-12 Score=133.11 Aligned_cols=184 Identities=15% Similarity=0.138 Sum_probs=116.1
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||.|++|+||+|+. .+..|++|..++.....
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------------- 49 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQ----------------------------------------- 49 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHH-----------------------------------------
Confidence 6799999999999985 35789999774321100
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc----------------CCC
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----------------GVD 441 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~----------------~~d 441 (773)
..-+|.+|+..+.++. +++ +++++. ......+++|||++|++|.++...... ..+
T Consensus 50 ~~~~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 50 QWGEFQQEASLMAELH-----HPN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred HHHHHHHHHHHHhhCC-----CCC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 0113455555555442 233 233332 234567999999999999887532211 122
Q ss_pred HHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004115 442 RKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 519 (773)
Q Consensus 442 ~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~ 519 (773)
...+...+ +...+..+|..|++|+|++|.||++++ ++.+++.|||++..+......... ........+++++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE 196 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE--QLHVKISDLGLSREIYSADYYRVQ----PKSLLPIRWMPPE 196 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC--CCcEEeccccccccccCCcceecc----cCCCccceecChH
Confidence 22222222 223478899999999999999999985 788999999999876433211100 1111233456666
Q ss_pred HHHcCCCCCCCChHHHHHHHHHHH
Q 004115 520 MVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 520 l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
...-+...+..|++++...+.+++
T Consensus 197 ~~~~~~~~~~~Dv~slG~il~el~ 220 (283)
T cd05090 197 AIMYGKFSSDSDIWSFGVVLWEIF 220 (283)
T ss_pred HhccCCCCchhhhHHHHHHHHHHH
Confidence 665566677789999987776655
No 155
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.37 E-value=8.1e-12 Score=132.45 Aligned_cols=181 Identities=19% Similarity=0.155 Sum_probs=119.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|+.||||+.++.-.. .....-.
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---------------------------------------~~~~~~~ 47 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV---------------------------------------KLKQVEH 47 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh---------------------------------------hhhHHHH
Confidence 6799999999999998 5899999987421100 0001123
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|++.+.++. +++ +.+...+ ......+++|||++|++|.++.... ..++...+...+ +...+..+|..
T Consensus 48 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 48 VLNEKRILQSIR-----HPFLVNLYGSF-QDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred HHHHHHHHHhCC-----CCCccceeeEE-EcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 455655555543 232 2233333 2345679999999999998865322 223433333322 23446788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||.||+++. ++.++++|||++..+..... ...+.+.+++++...-+......|++++...+.
T Consensus 121 ~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 189 (290)
T cd05580 121 DIVYRDLKPENLLLDS--DGYIKITDFGFAKRVKGRTY---------TLCGTPEYLAPEIILSKGYGKAVDWWALGILIY 189 (290)
T ss_pred CEecCCCCHHHEEECC--CCCEEEeeCCCccccCCCCC---------CCCCCccccChhhhcCCCCCccccHHHHHHHHH
Confidence 9999999999999986 78999999999988765411 112445566666655454556789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 190 ~l~ 192 (290)
T cd05580 190 EML 192 (290)
T ss_pred HHH
Confidence 655
No 156
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.37 E-value=6.7e-12 Score=129.25 Aligned_cols=180 Identities=19% Similarity=0.203 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+++|++|.||+|+. +|+.|++|....... .-+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------------------------------------~~~ 44 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--------------------------------------------LQE 44 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--------------------------------------------HHH
Confidence 5799999999999999 489999998632100 013
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+.+|.+.+.++ +++++ .+...+ ......+++|||++|.+|.++........+...+...+.+ ..+..+|..
T Consensus 45 ~~~e~~~~~~l-----~~~~i~~~~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 45 IIKEISILKQC-----DSPYIVKYYGSY-FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred HHHHHHHHHhC-----CCCcEeeeeeee-ecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44455444444 22322 222222 2235679999999999999876443334444444333322 346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|+||+++. ++.+++.|||++..+....... ....+...++.++...-.......|++++...+.
T Consensus 119 ~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~ 190 (256)
T cd06612 119 KKIHRDIKAGNILLNE--EGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAI 190 (256)
T ss_pred CcccCCCCcceEEECC--CCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHH
Confidence 9999999999999985 7899999999999876543211 1112344556666665555566789999887766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 191 ~l~ 193 (256)
T cd06612 191 EMA 193 (256)
T ss_pred HHH
Confidence 554
No 157
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.37 E-value=5.6e-12 Score=137.79 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=58.3
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 532 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~ 532 (773)
.+..+|..|++|+|++|.||+++. ++.++++|||++..+...... .. .......+.+++++....+......|+
T Consensus 191 al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di 264 (343)
T cd05103 191 GMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDY--VR--KGDARLPLKWMAPETIFDRVYTIQSDV 264 (343)
T ss_pred HHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcch--hh--cCCCCCCcceECcHHhcCCCCCchhhH
Confidence 467789999999999999999985 789999999998876432110 00 011112234556666555555667899
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+.+++
T Consensus 265 ~slG~~l~el~ 275 (343)
T cd05103 265 WSFGVLLWEIF 275 (343)
T ss_pred HHHHHHHHHHH
Confidence 99887766554
No 158
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.37 E-value=6.3e-12 Score=130.78 Aligned_cols=192 Identities=13% Similarity=0.079 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|+||+|.. +|+.||||..+...... .. ..+. .-.+
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-----------------------------~~-~~~~------~~~~ 49 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-----------------------------LA-AEKE------YEKL 49 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-----------------------------hh-HHHH------HHHH
Confidence 5799999999999988 78999999874322111 00 0011 1134
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.+|+..+.++. ++++ .+...+ ......+++|||++|++|.++.... .......+...+ +...+..+|..|
T Consensus 50 ~~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (265)
T cd06631 50 QEEVDLLKSLK-----HVNIVQYLGTC-LDDNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNC 122 (265)
T ss_pred HHHHHHHHhcC-----CCCEeeEeeEe-ecCCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45554444442 2222 222222 2335679999999999999875321 223333332222 223467789999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHH-HHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIRE-GLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~-~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.++++|||++..+...... ...... ....+...++.++...-....+..|++++...+.
T Consensus 123 i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~ 199 (265)
T cd06631 123 VVHRDIKGNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTHSNML-KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVF 199 (265)
T ss_pred cccCCcCHHhEEECC--CCeEEeccchhhHhhhhccccccccccc-cccCCCccccChhhhcCCCCcchhhHHHHHHHHH
Confidence 999999999999985 889999999988765321100 000000 0112334455566555444556789998887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 200 ~l~ 202 (265)
T cd06631 200 EMA 202 (265)
T ss_pred HHH
Confidence 554
No 159
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.37 E-value=1.2e-11 Score=128.61 Aligned_cols=183 Identities=17% Similarity=0.158 Sum_probs=119.1
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|+||+|.. .+..||+|..+++... +-+|
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-------------------------------------------PESF 48 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC-------------------------------------------HHHH
Confidence 5699999999999998 6788999988653210 0124
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.+|+.-+.++. +..-+.+...+ .....+++|||++|++|.++.... ....+...+...+ +...+..+|..|
T Consensus 49 ~~E~~~l~~l~----~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 49 LEEAQIMKKLR----HDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred HHHHHHHHhcC----CCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 45554444432 22222333322 235579999999999998865321 1223433333322 223467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||++++ ++.++++|||.+..+......... -......+++++....+..+...|.+++...+.+
T Consensus 123 i~H~di~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05070 123 YIHRDLRSANILVGD--GLVCKIADFGLARLIEDNEYTARQ-----GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred cccCCCccceEEEeC--CceEEeCCceeeeeccCccccccc-----CCCCCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence 999999999999986 789999999999877543211100 0112234666776666666777899999887776
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 196 l~~ 198 (260)
T cd05070 196 LVT 198 (260)
T ss_pred HHh
Confidence 653
No 160
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.37 E-value=8e-12 Score=129.31 Aligned_cols=178 Identities=14% Similarity=0.109 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+.+|+|++|.||+|...|+.||||..+.... ..-.+.
T Consensus 12 ~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-------------------------------------------~~~~~~ 48 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-------------------------------------------AAQAFL 48 (256)
T ss_pred eeeecCCCceEEEEEecCcEEEEEEeccchh-------------------------------------------HHHHHH
Confidence 6799999999999999999999998732211 011233
Q ss_pred HHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 386 QEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.|...+.++. ++++. +...+ ......+++|||++|++|.++...... ......+...+ +...+..+|..|
T Consensus 49 ~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 122 (256)
T cd05039 49 AEASVMTTLR-----HPNLVQLLGVV-LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122 (256)
T ss_pred HHHHHHHhcC-----CcceeeeEEEE-cCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444444432 22322 22222 235678999999999999987543221 23333333322 223467899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||+||+++. ++.++++|||.+...+..... ......+++++....+...+..|++++...+.+
T Consensus 123 i~H~di~p~Nili~~--~~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~ 191 (256)
T cd05039 123 FVHRDLAARNVLVSE--DLVAKVSDFGLAKEASQGQDS---------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ccchhcccceEEEeC--CCCEEEccccccccccccccc---------CCCcccccCchhhcCCcCCcHHHHHHHHHHHHH
Confidence 999999999999985 889999999999887543221 111223455555555666667899988876655
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 192 l~ 193 (256)
T cd05039 192 IY 193 (256)
T ss_pred HH
Confidence 44
No 161
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.37 E-value=1.1e-11 Score=126.28 Aligned_cols=179 Identities=16% Similarity=0.166 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEee-c-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCC--cccchHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDG--AKRDWVAIYDECA 375 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~--~~~d~~~i~~E~~ 375 (773)
.+|++|--|-||.|.. + +..|||||-|....+- +....++.. .+.+.+ ...+|..++...+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~-~~rf~~~~~k~~~~~~~~~wa 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKD-DYRFKDRFSKLNPRKIIRMWA 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccC-CcccccCcCCCCHHHHHHHHH
Confidence 3789999999999986 3 3799999998765432 112222211 111111 1134555544333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCC---HHHHHHHHHHH
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD---RKRLGRYAVES 452 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d---~~~la~~li~~ 452 (773)
.+|++|+.++++ .++.+|+++. ..+.+|||||+.|..+..- .+.....+ ...+...++..
T Consensus 74 ---------~kE~r~L~rl~~-----~Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~ 136 (197)
T cd05146 74 ---------EKEMHNLKRMQK-----AGIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSM 136 (197)
T ss_pred ---------HHHHHHHHHHHH-----cCCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHH
Confidence 568889999876 3688999995 5889999999987532210 01111122 22334444555
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 520 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l 520 (773)
...++|..|++|+||+|.||++. ++++++||||.+-..+...-..+ +.+|...+..-+
T Consensus 137 l~~l~H~~glVHGDLs~~NIL~~---~~~v~iIDF~qav~~~hp~a~~~-------l~RD~~ni~~fF 194 (197)
T cd05146 137 MKQLYKECNLVHADLSEYNMLWH---DGKVWFIDVSQSVEPTHPHGLEF-------LFRDCRNVIQFF 194 (197)
T ss_pred HHHHHHhCCeecCCCCHHHEEEE---CCcEEEEECCCceeCCCCCHHHH-------HHHHHHHHHHHh
Confidence 45556899999999999999997 57899999999998875543332 345655554433
No 162
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=7.2e-13 Score=157.93 Aligned_cols=122 Identities=21% Similarity=0.249 Sum_probs=89.5
Q ss_pred CCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 415 TPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
...||||||++|+.|-.+..--. .+.+..++...-+-..+..||+.|++|||+||.|||++. .|.|+|.|||.+-.+
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCLKM 225 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHHhc
Confidence 44689999999999877642211 222223333333445578899999999999999999986 899999999999888
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHHHHHHHHHH
Q 004115 494 SPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 494 s~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~~~~D~~~l~~~i~~~l 543 (773)
+.+-. . -..+.-+.|+++.+.++.. |...+..|-++++..+|+|+
T Consensus 226 ~~dG~---V--~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 226 DADGT---V--RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred CCCCc---E--EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 74321 1 1123457889998887763 56677889999999888887
No 163
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.36 E-value=8.6e-12 Score=132.40 Aligned_cols=185 Identities=16% Similarity=0.110 Sum_probs=118.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +|+.||||...+..... .+. +-.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~------~~~ 46 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------RKG------ESM 46 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc---------------------------------hHH------HHH
Confidence 5699999999999998 68999999874321110 000 111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|...+.++. +...+.+...+ ......++||||++|++|.+.... ...+.+...+...+ +...+..+|..
T Consensus 47 ~~~E~~il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05630 47 ALNEKQILEKVN----SRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE 121 (285)
T ss_pred HHHHHHHHHhCC----CCCeeeeeEEE-ecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234554444432 21112222222 223567999999999999886532 22234433333332 22346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++++|||++...+...... -..+...+++++...-+......|.+++...+.
T Consensus 122 ~iiH~dikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 192 (285)
T cd05630 122 RIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192 (285)
T ss_pred CEEeCCCCHHHEEECC--CCCEEEeeccceeecCCCcccc-------CCCCCccccChHHHcCCCCCCccccHHHHHHHH
Confidence 9999999999999985 7899999999987765432110 012445666777776666677789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (285)
T cd05630 193 EMI 195 (285)
T ss_pred HHH
Confidence 654
No 164
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.36 E-value=5e-12 Score=133.46 Aligned_cols=189 Identities=18% Similarity=0.172 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
..||.|++|.||.|.. +++.||+|..++..... .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~-----------------------------------~----- 49 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN-----------------------------------H----- 49 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHH-----------------------------------H-----
Confidence 4699999999999974 47899999875542111 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~q 456 (773)
.-++.+|...+.++. +..-+.+...+... ....++||||++|++|.++........+.......+ +...+..
T Consensus 50 -~~~~~~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~ 124 (284)
T cd05079 50 -IADLKKEIEILRNLY----HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDY 124 (284)
T ss_pred -HHHHHHHHHHHHhCC----CCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 013445555444442 22222233322222 134689999999999998753322223444333322 2344788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
+|..|++|+|+||.||+++. ++.+++.|||++..+....... . ......+...+++++...-+...+..|++++.
T Consensus 125 lH~~gi~H~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~--~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 199 (284)
T cd05079 125 LGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYY--T-VKDDLDSPVFWYAPECLIQSKFYIASDVWSFG 199 (284)
T ss_pred HHHCCeeecccchheEEEcC--CCCEEECCCccccccccCccce--e-ecCCCCCCccccCHHHhccCCCCccccchhhh
Confidence 99999999999999999985 7899999999998775432110 0 00111233345556655555566778999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+++++.
T Consensus 200 ~il~ellt 207 (284)
T cd05079 200 VTLYELLT 207 (284)
T ss_pred hhhhhhhc
Confidence 87777653
No 165
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.36 E-value=8.1e-12 Score=131.33 Aligned_cols=185 Identities=14% Similarity=0.082 Sum_probs=114.5
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||.|++|.||+|++ +|+ +||||+.+......
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~----------------------------------------- 51 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK----------------------------------------- 51 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH-----------------------------------------
Confidence 6899999999999997 554 58999874322110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
.+-++.+|...+..+. ++++....-+ ......+++|||++|+++.++.......+....+...+ +...+..+
T Consensus 52 ~~~~~~~e~~~l~~~~-----~~~i~~~~~~-~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~l 125 (279)
T cd05109 52 ANKEILDEAYVMAGVG-----SPYVCRLLGI-CLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYL 125 (279)
T ss_pred HHHHHHHHHHHHHhcC-----CCCCceEEEE-EcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 0113444544443332 2333221111 22345689999999999988654322233444443333 33347889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|+.|++|+|+||+||++.+ ++.++|+|||++..++........ .-......++.++....+......|++++.-
T Consensus 126 H~~~iiH~dlkp~Nil~~~--~~~~kL~dfG~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~ 199 (279)
T cd05109 126 EEVRLVHRDLAARNVLVKS--PNHVKITDFGLARLLDIDETEYHA----DGGKVPIKWMALESILHRRFTHQSDVWSYGV 199 (279)
T ss_pred HHCCeeccccccceEEEcC--CCcEEECCCCceeecccccceeec----CCCccchhhCCHHHhccCCCCchhHHHHHHH
Confidence 9999999999999999975 789999999999877543211000 0001123455566555555566779999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 200 ~l~el~ 205 (279)
T cd05109 200 TVWELM 205 (279)
T ss_pred HHHHHH
Confidence 666554
No 166
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.36 E-value=4.2e-12 Score=132.97 Aligned_cols=186 Identities=16% Similarity=0.118 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee-c------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|+. + ++.||||+.+..... +
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~----- 50 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-----------------------------------D----- 50 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-----------------------------------H-----
Confidence 5799999999999987 2 378999986322110 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-------------cCCCHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------------LGVDRKRL 445 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------------~~~d~~~l 445 (773)
.+-+|.+|++.+.++.+ +++.-..-+.......+++|||++|++|.++..... .......+
T Consensus 51 -~~~~~~~e~~~l~~l~~-----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (280)
T cd05049 51 -ARKDFEREAELLTNFQH-----ENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQL 124 (280)
T ss_pred -HHHHHHHHHHHHHhcCC-----CCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHH
Confidence 01245666666665532 332222222233467899999999999998753211 11122222
Q ss_pred HHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004115 446 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 523 (773)
Q Consensus 446 a~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l 523 (773)
...+ +...+..+|..|++|+|++|+||+++. ++.++++|||++..+......... ......+.++++++..-
T Consensus 125 ~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~ 198 (280)
T cd05049 125 LQIAVQIASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRVG----GHTMLPIRWMPPESIMY 198 (280)
T ss_pred HHHHHHHHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceecccCcceecC----CCCcccceecChhhhcc
Confidence 2222 223467889999999999999999986 799999999998765332110000 00112345677777777
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004115 524 GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 524 G~~~~~~D~~~l~~~i~~~l 543 (773)
+...+..|++++...+.+++
T Consensus 199 ~~~~~~~Di~slG~il~e~~ 218 (280)
T cd05049 199 RKFTTESDVWSFGVVLWEIF 218 (280)
T ss_pred CCcchhhhHHHHHHHHHHHH
Confidence 77777889999987776665
No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.36 E-value=6.9e-12 Score=132.20 Aligned_cols=179 Identities=16% Similarity=0.118 Sum_probs=115.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|.||+|+. +|+.||||+...+... + .+-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~------~~~~ 45 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV-----------------------------------E------LQKQ 45 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh-----------------------------------H------HHHH
Confidence 5799999999999998 6899999987432110 0 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCc
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 463 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~Gff 463 (773)
+.+|.+.+.++. ++++.-+.-+.......++||||++|+++........ .....++.. +...+..+|..|++
T Consensus 46 ~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~q-i~~~l~~lH~~~i~ 117 (279)
T cd06619 46 IMSELEILYKCD-----SPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPE--HVLGRIAVA-VVKGLTYLWSLKIL 117 (279)
T ss_pred HHHHHHHHHhCC-----CCCeeeEEEEEEECCEEEEEEecCCCCChHHhhcCCH--HHHHHHHHH-HHHHHHHHHHCCEe
Confidence 445555444432 2333222222233456789999999998875432111 011122222 22336789999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
|+|+||.||+++. ++.++++|||++..+....... ..+...+++++...-+......|++++...+.+++
T Consensus 118 H~dlkp~Nill~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 118 HRDVKPSNMLVNT--RGQVKLCDFGVSTQLVNSIAKT--------YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred eCCCCHHHEEECC--CCCEEEeeCCcceecccccccC--------CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHH
Confidence 9999999999985 8999999999998765432211 12445566666665555566789999988776655
No 168
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.36 E-value=1.4e-11 Score=127.71 Aligned_cols=181 Identities=17% Similarity=0.150 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||+|++|.||+|.+ +++.||||+.+++... .-++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~-------------------------------------------~~~~ 48 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS-------------------------------------------PEAF 48 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccC-------------------------------------------HHHH
Confidence 6899999999999998 5688999987543210 0124
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHh
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
..|...+.++. +++ +++.+. +.....+++|||++|.+|.++..... ...+...+...+ +...+..+|.
T Consensus 49 ~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~ 121 (261)
T cd05034 49 LQEAQIMKKLR-----HDK--LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES 121 (261)
T ss_pred HHHHHHHhhCC-----CCC--EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44554444432 222 333332 23356799999999999988653221 223333333322 2234678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||++++ ++.++++|||.+..+......... -......++.++...-+...+..|++++...+
T Consensus 122 ~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 122 RNYIHRDLAARNILVGE--NLVCKIADFGLARLIEDDEYTARE-----GAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred CCcccCCcchheEEEcC--CCCEEECccccceeccchhhhhhh-----ccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 99999999999999986 899999999999887642211110 01112345556665555566678999988776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 195 ~~l~ 198 (261)
T cd05034 195 TEIV 198 (261)
T ss_pred HHHH
Confidence 6654
No 169
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.36 E-value=5.3e-12 Score=138.57 Aligned_cols=187 Identities=18% Similarity=0.183 Sum_probs=113.2
Q ss_pred hccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
..|. .+.||+|++|.||+|+. +|+.||||+........ +.
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~--- 63 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ----------------------------------TH--- 63 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch----------------------------------hH---
Confidence 3443 37899999999999998 68999999874321110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--H
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--V 450 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i 450 (773)
...+.+|...+..+. +..-+.+..++.. .....++||||++|.....+. ...+...+...+ +
T Consensus 64 ---~~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi 132 (359)
T cd07876 64 ---AKRAYRELVLLKCVN----HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQM 132 (359)
T ss_pred ---HHHHHHHHHHHHhCC----CCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHH
Confidence 112233433333321 2111222222211 112469999999985333221 123434433332 3
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 530 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~ 530 (773)
...+..+|.+|++|+|+||.||+++. ++.++|+|||++......... .-..+...+++++...-....+..
T Consensus 133 ~~~L~~LH~~~ivHrDlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~ 203 (359)
T cd07876 133 LCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMM-------TPYVVTRYYRAPEVILGMGYKENV 203 (359)
T ss_pred HHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEecCCCccccccCccC-------CCCcccCCCCCchhccCCCCCcch
Confidence 34578899999999999999999985 899999999998765432110 001223445566665545556678
Q ss_pred ChHHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFLN 544 (773)
Q Consensus 531 D~~~l~~~i~~~l~ 544 (773)
|++++...+++++.
T Consensus 204 DiwSlG~il~el~t 217 (359)
T cd07876 204 DIWSVGCIMGELVK 217 (359)
T ss_pred hhHHHHHHHHHHHh
Confidence 99999988777653
No 170
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.36 E-value=6.8e-12 Score=134.97 Aligned_cols=185 Identities=13% Similarity=0.091 Sum_probs=116.5
Q ss_pred cccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
.+.||+|++|+||+|++ +|+ .||||+.++..... .
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~---- 52 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-----------------------------------A---- 52 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH-----------------------------------H----
Confidence 37899999999999997 444 48999874321100 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLE 455 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~ 455 (773)
.-++..|+..+..+. ++++ .+.+. ......+++|||++++++.++........+...+.... +...+.
T Consensus 53 --~~~~~~e~~~l~~l~-----h~ni--v~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 53 --NKEILDEAYVMASVD-----NPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred --HHHHHHHHHHHHhCC-----CCCC--CeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 113444554444432 2332 22222 12345689999999999988654333234444443333 233478
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+|..|++|+|+||.||+++. ++.++|+|||++..+.......-. ........++.+++..-+......|++++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~sl 197 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGADEKEYHA----EGGKVPIKWMALESILHRIYTHQSDVWSY 197 (316)
T ss_pred HHHhcCeeccccchhheEecC--CCcEEEccccccccccCCCcceec----cCCccceeecChHHhccCCCCchhhhHHH
Confidence 899999999999999999985 789999999999987643321100 00011223555666555556677899999
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+.+++
T Consensus 198 Gv~l~el~ 205 (316)
T cd05108 198 GVTVWELM 205 (316)
T ss_pred HHHHHHHH
Confidence 87776654
No 171
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.35 E-value=5.4e-12 Score=132.89 Aligned_cols=186 Identities=18% Similarity=0.170 Sum_probs=113.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+.+...... . . ..+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~----~-------------~~~ 45 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-----------------------G----L-------------PLS 45 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-----------------------C----C-------------chH
Confidence 5699999999999998 68999999875422110 0 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec----cCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHH--HHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWE----YTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAV--ESYLE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li--~~~l~ 455 (773)
+..|...+.++++ + +++++ .+-.++.. .....+++|||++| .+.++... ...+.+...+...+. ...+.
T Consensus 46 ~~~e~~~l~~l~~-~-~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 122 (288)
T cd07863 46 TVREVALLKRLEA-F-DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122 (288)
T ss_pred HHHHHHHHHHhhh-c-CCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 2223333333321 1 12222 12122211 12346899999997 56554322 222344444433332 23478
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+|..|++|+|+||+||+++. ++.++|+|||++..++..... ....+...+++++...-+......|++++
T Consensus 123 ~lH~~~ivH~dikp~Nili~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 193 (288)
T cd07863 123 FLHANCIVHRDLKPENILVTS--GGQVKLADFGLARIYSCQMAL-------TPVVVTLWYRAPEVLLQSTYATPVDMWSV 193 (288)
T ss_pred HHHhCCeecCCCCHHHEEECC--CCCEEECccCccccccCcccC-------CCccccccccCchHhhCCCCCCcchhhhH
Confidence 899999999999999999985 889999999999876543211 00122344566666655556777899999
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+++++
T Consensus 194 G~~l~~l~ 201 (288)
T cd07863 194 GCIFAEMF 201 (288)
T ss_pred HHHHHHHH
Confidence 98776654
No 172
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.35 E-value=6.3e-12 Score=129.71 Aligned_cols=117 Identities=16% Similarity=0.084 Sum_probs=80.2
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCC-------cEEEE
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGG-------RLIFY 485 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g-------~I~Ll 485 (773)
...++||||++|++|.++........+...+...+ +...+..+|..|++|+|++|.||+++. ++ .++++
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~~~~~~~~kl~ 150 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVAR--YGLNEGYVPFIKLS 150 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEec--CccccCCceeEEeC
Confidence 56799999999999998764433234444433322 334478899999999999999999985 44 79999
Q ss_pred eecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHHHHH
Q 004115 486 DFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 486 DFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG--~~~~~~D~~~l~~~i~~~l 543 (773)
|||++..+..... ......+++++....+ ......|++++...+.+++
T Consensus 151 Dfg~a~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 151 DPGIPITVLSREE----------RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred CCCcccccccccc----------cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 9999887654111 1123345566655544 4556678998887666554
No 173
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.35 E-value=9.8e-12 Score=128.42 Aligned_cols=182 Identities=14% Similarity=0.146 Sum_probs=121.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.|+||+.++..... ..-+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~-----------------------------------------~~~~ 45 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE-----------------------------------------FRKQ 45 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchH-----------------------------------------HHHH
Confidence 6899999999999999 59999999875432110 0123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|.+.+.++. +++ +++++ .......+++|||++|.+|.++.... ...+.......+ +...+..+|.
T Consensus 46 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~ 117 (264)
T cd06623 46 LLRELKTLRSCE-----SPY--VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHT 117 (264)
T ss_pred HHHHHHHHHhcC-----CCC--eeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 445555555543 222 23332 23345679999999999999875432 233444333332 2234678999
Q ss_pred -CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 460 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 -~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
.|++|+|++|+||++++ ++.++++|||+...+....... ........++.++....+..+...|.+++...
T Consensus 118 ~~~~~H~~l~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 189 (264)
T cd06623 118 KRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLT 189 (264)
T ss_pred cCCCccCCCCHHHEEECC--CCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence 99999999999999986 8899999999998875433221 01123444566666666666667899999887
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+.+++.
T Consensus 190 l~~l~t 195 (264)
T cd06623 190 LLECAL 195 (264)
T ss_pred HHHHHh
Confidence 776653
No 174
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.35 E-value=1.1e-11 Score=129.09 Aligned_cols=181 Identities=20% Similarity=0.155 Sum_probs=112.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||+|+.+....+. ...
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~------------------------------------------~~~ 52 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD------------------------------------------FSL 52 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccch------------------------------------------HHH
Confidence 6799999999999998 68999999985321110 002
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|+..+.++. ++++ .+...+ ......++||||++|++|.++.... ...+...+.... +...+..+|..
T Consensus 53 ~~~e~~~l~~~~-----h~~ii~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 53 IQQEIFMVKECK-----HCNIVAYFGSY-LSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred HHHHHHHHHhcC-----CCCeeeeeEEE-EeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 334444443332 2322 222222 2235679999999999998864321 223333332222 23346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRR 537 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG~~~~~~D~~~l~~ 537 (773)
|++|+|++|+||+++. ++.++++|||++..+........ ...+...++.++... .+......|++++..
T Consensus 126 ~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~ 197 (267)
T cd06646 126 GKMHRDIKGANILLTD--NGDVKLADFGVAAKITATIAKRK------SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI 197 (267)
T ss_pred CccccCCCHHHEEECC--CCCEEECcCccceeecccccccC------ccccCccccCHhHcccccCCCCcchhhHHHHHH
Confidence 9999999999999975 78899999999987753221000 012334455555542 222345679999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 198 il~el~ 203 (267)
T cd06646 198 TAIELA 203 (267)
T ss_pred HHHHHH
Confidence 666654
No 175
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.35 E-value=3e-12 Score=138.89 Aligned_cols=182 Identities=18% Similarity=0.188 Sum_probs=113.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-||.||+|.||.|.. +|+..|||...-.- .+. .+.+.+|+.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~------------------------------~~~------~~~l~~Ei~ 66 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELED------------------------------SPT------SESLEREIR 66 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeeccc------------------------------chh------HHHHHHHHH
Confidence 5799999999999999 49999999761100 000 233344443
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee---ccC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH--HHHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW---EYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGR--YAVESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~---e~s-t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~--~li~~~l~qI 457 (773)
. +.++. +++| -+.|. ... ....+.|||++|++|.++..-....+....+.. ..+-.-+.++
T Consensus 67 i------L~~l~-----~p~I--V~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~yl 133 (313)
T KOG0198|consen 67 I------LSRLN-----HPNI--VQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYL 133 (313)
T ss_pred H------HHhCC-----CCCE--EeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3 22222 1211 11111 111 147899999999999997643322233322222 2233447889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC-CCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV-PTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~-~~~D~~~l~ 536 (773)
|++||+|+|+||.|||+.. .++.+++.|||+++........ .....-..+.+.+|+++...-|... +..|.+++.
T Consensus 134 Hs~g~vH~DiK~~NiLl~~-~~~~~KlaDFG~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG 209 (313)
T KOG0198|consen 134 HSKGIVHCDIKPANILLDP-SNGDVKLADFGLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG 209 (313)
T ss_pred HhCCEeccCcccceEEEeC-CCCeEEeccCcccccccccccc---ccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence 9999999999999999984 2589999999999988740000 0000123567888888888755433 478988887
Q ss_pred HHHH
Q 004115 537 RTAQ 540 (773)
Q Consensus 537 ~~i~ 540 (773)
-.+-
T Consensus 210 CtVv 213 (313)
T KOG0198|consen 210 CTVV 213 (313)
T ss_pred CEEE
Confidence 5443
No 176
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.35 E-value=7e-12 Score=133.82 Aligned_cols=182 Identities=17% Similarity=0.138 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|.||+|+. +|+.|++|......... .-.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------------~~~ 63 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK------------------------------------------KEL 63 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch------------------------------------------HHH
Confidence 5799999999999997 68999999763211100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|+..+..+ +++++.-..-+.......++||||++|++|.++... ...+...+...+ +...+..+|..|
T Consensus 64 ~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 64 IINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34444433332 223322211122234567999999999999987532 223444443332 223467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.++++|||++..+.+..... ....+.+.++++++..-+...+..|++++...+.+
T Consensus 137 i~H~dLkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~ 208 (296)
T cd06654 137 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (296)
T ss_pred cccCCCCHHHEEEcC--CCCEEECccccchhcccccccc------CcccCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence 999999999999985 7899999999988765543211 11124455667777666666778899999887766
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 209 l~~ 211 (296)
T cd06654 209 MIE 211 (296)
T ss_pred HHh
Confidence 653
No 177
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.35 E-value=7e-12 Score=130.14 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=119.1
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.. +++.||+|...+.-.. .-++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------------~~~~ 48 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-------------------------------------------VQAF 48 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-------------------------------------------HHHH
Confidence 6799999999999998 6788999986432100 0124
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
..|...+.++. ++++.-...+.......+++|||++|++|.++.... ........+.... +...+..+|..|
T Consensus 49 ~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 49 LEEANLMKTLQ-----HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 123 (261)
T ss_pred HHHHHHHHhCC-----CCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44555444432 233322222223345569999999999998865322 1223333333222 334478889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||++++ ++.+++.|||.+..+........ ........+++++....+...+..|.+++...+.+
T Consensus 124 i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 196 (261)
T cd05072 124 YIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTAR-----EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196 (261)
T ss_pred eeccccchhhEEecC--CCcEEECCCccceecCCCceecc-----CCCccceecCCHHHhccCCCChhhhhhhhHHHHHH
Confidence 999999999999985 88999999999988754321100 00112234666666666666777899999887766
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 197 l~ 198 (261)
T cd05072 197 IV 198 (261)
T ss_pred HH
Confidence 65
No 178
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.35 E-value=1.3e-11 Score=127.44 Aligned_cols=186 Identities=12% Similarity=0.048 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+++|.|++|.||+|.. +|+.||||........ .+. .-.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~~~------~~~ 45 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS----------------------------------RRE------RKA 45 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC----------------------------------HHH------HHH
Confidence 5799999999999998 5889999986211100 000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+.+|...+.++. +...+.+...+.......+++|||++|.++.++.... ....+...+...+. -..+..+|..
T Consensus 46 ~~~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 46 AEQEAQLLSQLK----HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred HHHHHHHHHhCC----CCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 334444343332 2122222222222233468999999999998865332 12234443333332 2346889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++++|||++..+...... . ....+.+.+++++....+......|.+++...+.
T Consensus 122 ~i~H~di~p~nil~~~--~~~~~l~df~~~~~~~~~~~~--~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 193 (257)
T cd08223 122 HILHRDLKTQNVFLTR--TNIIKVGDLGIARVLENQCDM--A----STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVY 193 (257)
T ss_pred CeeccCCCchhEEEec--CCcEEEecccceEEecccCCc--c----ccccCCcCccChhHhcCCCCCchhhhHHHHHHHH
Confidence 9999999999999985 889999999999876432110 0 1122345567777776666667789999887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 194 ~l~ 196 (257)
T cd08223 194 EMA 196 (257)
T ss_pred HHH
Confidence 554
No 179
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.35 E-value=9.9e-12 Score=129.00 Aligned_cols=181 Identities=15% Similarity=0.158 Sum_probs=115.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.. .+..+|||+.+++... +-+|
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~-------------------------------------------~~~~ 46 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS-------------------------------------------EDDF 46 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC-------------------------------------------HHHH
Confidence 6799999999999998 5678999987432110 0123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|...+.++. +++ +++.+ .......+++|||++|.+|.++........+...+.... +...+..+|..
T Consensus 47 ~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 47 IEEAKVMMKLS-----HPN--LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred HHHHHHHHhCC-----CCC--EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34444444332 233 23333 234456799999999999998754322233443333322 22346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++++|||++........... ........++.+++...+......|++++...+.
T Consensus 120 ~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~ 192 (256)
T cd05059 120 GFIHRDLAARNCLVGE--DNVVKVSDFGLARYVLDDQYTSS-----QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMW 192 (256)
T ss_pred CcccccccHhhEEECC--CCcEEECCcccceeccccccccc-----CCCCCCccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 9999999999999985 78999999999886643211000 0001112456666666566667789999887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (256)
T cd05059 193 EVF 195 (256)
T ss_pred HHh
Confidence 554
No 180
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.35 E-value=1.2e-11 Score=135.30 Aligned_cols=86 Identities=15% Similarity=0.068 Sum_probs=62.6
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|+||.||++++ ++.++|+|||++..+....... . .........+++++...-+...+..|
T Consensus 184 ~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~-~---~~~~~~~~~y~aPE~~~~~~~~~~~D 257 (337)
T cd05054 184 RGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYV-R---KGDARLPLKWMAPESIFDKVYTTQSD 257 (337)
T ss_pred HHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchh-h---ccCCCCCccccCcHHhcCCCCCcccc
Confidence 4478899999999999999999986 7899999999998875432110 0 01112234466777666666777889
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+++++
T Consensus 258 i~SlGv~l~el~ 269 (337)
T cd05054 258 VWSFGVLLWEIF 269 (337)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 181
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.35 E-value=1.3e-11 Score=127.94 Aligned_cols=187 Identities=14% Similarity=0.070 Sum_probs=115.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||+|..++.... +. +. .-+
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------~~-----~~------~~~ 48 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM----------------------------DA-----KA------RQD 48 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeeccccc----------------------------ch-----hh------HHH
Confidence 6799999999999999 6999999987431100 00 00 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAV--ESYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~li--~~~l~qI~ 458 (773)
+.+|...+.++. ++++.-+.-+.......+++|||++|++|.++... . ........+...+. ...+..+|
T Consensus 49 ~~~ei~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 49 CLKEIDLLKQLD-----HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHhCC-----CCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 344444343332 22222222122234567999999999999886432 1 11233333333322 23367789
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||+++. ++.++++|||++..++....... ...+...+++++...-.......|++++...
T Consensus 124 ~~~i~h~dl~p~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~i 195 (267)
T cd08224 124 SKRIMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAH------SLVGTPYYMSPERIHENGYNFKSDIWSLGCL 195 (267)
T ss_pred hCCEecCCcChhhEEECC--CCcEEEeccceeeeccCCCcccc------eecCCccccCHHHhccCCCCchhcHHHHHHH
Confidence 999999999999999985 78999999999887654322110 0112333445555544445567899999877
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+.+++.
T Consensus 196 l~~l~~ 201 (267)
T cd08224 196 LYEMAA 201 (267)
T ss_pred HHHHHH
Confidence 766653
No 182
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.35 E-value=1.1e-11 Score=130.99 Aligned_cols=183 Identities=16% Similarity=0.144 Sum_probs=112.7
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.||.|++|.||+|.. +|+.||||+..+.....- ..+..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------------~~~~~~ 41 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK---------------------------------------QGETLA 41 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc---------------------------------------hhHHHH
Confidence 479999999999998 589999998754211100 001112
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
..|...+...+. . +++.+ +..+.. .....++||||++|+.|.++.... ..+....+...+.+ ..+..+|..
T Consensus 42 ~~~~~~~~~~~~-~-~~~~i--~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~ 116 (278)
T cd05606 42 LNERIMLSLVST-G-DCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNR 116 (278)
T ss_pred HHHHHHHHHHHh-C-CCCcE--eeeeeeeecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 223322222222 1 22332 233222 234579999999999998765322 22333333332222 336788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i 539 (773)
|++|+|++|.||+++. ++.++++|||++..+....... ..+...+++++...-+ ......|.+++...+
T Consensus 117 ~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l 186 (278)
T cd05606 117 FVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPHA--------SVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 186 (278)
T ss_pred CEEcCCCCHHHEEECC--CCCEEEccCcCccccCccCCcC--------cCCCcCCcCcHHhcCCCCCCcccchHhHHHHH
Confidence 9999999999999985 7899999999988765432211 1234455666665444 345668999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 187 ~~l~ 190 (278)
T cd05606 187 FKLL 190 (278)
T ss_pred HHHH
Confidence 6655
No 183
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.35 E-value=1.1e-11 Score=129.34 Aligned_cols=181 Identities=15% Similarity=0.123 Sum_probs=116.8
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|++ ++..||||+.++... . +-+|
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-----------------------------~--------------~~~~ 48 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------------------------S--------------PEAF 48 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCcc-----------------------------C--------------HHHH
Confidence 4699999999999998 456799998743110 0 0135
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|...+.++.+ +++ .+...+ .....+++|||++|+++.++..... ...+...+.... +...+..+|..
T Consensus 49 ~~E~~~l~~l~~-----~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~ 121 (262)
T cd05071 49 LQEAQVMKKLRH-----EKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 121 (262)
T ss_pred HHHHHHHHhCCC-----CCcceEEEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 556665555432 322 222222 2345699999999999988754221 223333333322 22346779999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|+||++++ ++.++|+|||.+..++....... .....+..++.++....+......|++++...+.
T Consensus 122 ~i~H~dl~p~Nill~~--~~~~~L~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ 194 (262)
T cd05071 122 NYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (262)
T ss_pred CccccccCcccEEEcC--CCcEEeccCCceeeccccccccc-----cCCcccceecCHhHhccCCCCchhhHHHHHHHHH
Confidence 9999999999999986 78999999999987764331110 0112234466666665555666789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 195 ell 197 (262)
T cd05071 195 ELT 197 (262)
T ss_pred HHH
Confidence 654
No 184
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.35 E-value=8.7e-12 Score=132.54 Aligned_cols=185 Identities=19% Similarity=0.201 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEeec--------------C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 306 EPIAAASLGQVHRARLK--------------G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~--------------G--~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
+.||.|++|.||+|+.. | ..||||+.+++.....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------ 60 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA------------------------------ 60 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH------------------------------
Confidence 56999999999999862 1 2589998866532110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc---------
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL--------- 438 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~--------- 438 (773)
.-+|.+|.+.+.++.+ ++ +++++. ......++||||++|.+|.++......
T Consensus 61 -----------~~~~~~ei~~l~~l~h-----~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 122 (295)
T cd05097 61 -----------RNDFLKEIKIMSRLKN-----PN--IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANN 122 (295)
T ss_pred -----------HHHHHHHHHHHHhCCC-----CC--cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccccccccccc
Confidence 1135556665555432 22 233322 334567999999999999886532210
Q ss_pred --CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHH
Q 004115 439 --GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDAD 514 (773)
Q Consensus 439 --~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~ 514 (773)
..+...+...+ +...+..+|..|++|+|+||+||++++ ++.++++|||++..+........ .+.......
T Consensus 123 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~ 196 (295)
T cd05097 123 IPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN--HYTIKIADFGMSRNLYSGDYYRI----QGRAVLPIR 196 (295)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC--CCcEEecccccccccccCcceec----cCcCcCcee
Confidence 12222222222 223467889999999999999999985 78999999999876643211000 011112334
Q ss_pred HHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 515 KVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 515 ~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+++++....+......|.+++...+.+++.
T Consensus 197 y~aPE~~~~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 197 WMAWESILLGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred ecChhhhccCCcCchhhHHHHHHHHHHHHH
Confidence 556666555666778899999877766653
No 185
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.34 E-value=8.9e-12 Score=129.02 Aligned_cols=177 Identities=17% Similarity=0.165 Sum_probs=113.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+.+|.|++|+||++..+|+.||+|+.+.... . -.|.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~--------------------------------------~------~~~~ 47 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVT--------------------------------------A------QAFL 47 (254)
T ss_pred eeeccCCCCceEecccCCCceEEEeecCcch--------------------------------------H------HHHH
Confidence 6799999999999998999999998632110 0 0234
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
+|...+.++. +..-+.+...+ .....+++|||++|++|.++...... ..+...+.... +-..+..+|..|+
T Consensus 48 ~e~~~l~~~~----~~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~ 121 (254)
T cd05083 48 EETAVMTKLH----HKNLVRLLGVI--LHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL 121 (254)
T ss_pred HHHHHHHhCC----CCCcCeEEEEE--cCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4444443332 22222333332 23446999999999999887543221 23433333222 2234678899999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|+||+||+++. ++.++++|||.+......... ......++.++....+......|++++...+.++
T Consensus 122 ~H~dl~p~nili~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el 190 (254)
T cd05083 122 VHRDLAARNILVSE--DGVAKVSDFGLARVGSMGVDN---------SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV 190 (254)
T ss_pred eccccCcceEEEcC--CCcEEECCCccceeccccCCC---------CCCCceecCHHHhccCCcCchhhHHHHHHHHHHH
Confidence 99999999999985 789999999998765432110 0112334555555556666678999988777665
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 191 ~ 191 (254)
T cd05083 191 F 191 (254)
T ss_pred H
Confidence 4
No 186
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.34 E-value=4.5e-12 Score=132.12 Aligned_cols=190 Identities=18% Similarity=0.168 Sum_probs=113.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|+||+|+. +|+.|++|+..+..... + ..+-.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~-----~~~~~ 47 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK----------------------------------E-----KKVKY 47 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccc----------------------------------h-----HHHHH
Confidence 6899999999999998 69999999874311000 0 00112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+.++. ++++ +++++. ...+..+++|||++|.+|.++.... ...+...+.... +...+..+|.
T Consensus 48 ~~~e~~~~~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 48 VKIEKEVLTRLN----GHPG--IIKLYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred HHHHHHHHHhcc----cCCC--chhHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333333333332 1222 222221 2235679999999999998865322 133433333332 2334678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHH--------------HHHHHhhcCHHHHHHHHHHcCC
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE--------------AFYGIYEKDADKVLQAMVQMGV 525 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~--------------l~~al~~~D~~~i~~~l~~lG~ 525 (773)
.|++|+|++|.||+++. ++.++++|||++..+.......-.. .......+...++.++....+.
T Consensus 121 ~~~~H~dl~~~ni~i~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~ 198 (280)
T cd05581 121 KGIIHRDLKPENILLDK--DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP 198 (280)
T ss_pred CCeeecCCCHHHeEECC--CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC
Confidence 99999999999999985 8899999999998876543210000 0001111233445555554455
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l 543 (773)
.....|++++...+.+++
T Consensus 199 ~~~~~Di~slG~~l~~l~ 216 (280)
T cd05581 199 AGKSSDLWALGCIIYQML 216 (280)
T ss_pred CChhhhHHHHHHHHHHHH
Confidence 555678887776554443
No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.34 E-value=7.6e-12 Score=130.48 Aligned_cols=192 Identities=15% Similarity=0.179 Sum_probs=117.2
Q ss_pred hhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHH
Q 004115 296 LDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 373 (773)
Q Consensus 296 ~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E 373 (773)
++..|... +.||.|++|+||+|.. +++.||||+....-.
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------------------------------------- 44 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------------------------------------- 44 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-------------------------------------
Confidence 34444432 5699999999999998 589999998732100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-cccceeeec-----cCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHH
Q 004115 374 CASVLYQEIDYTQEAANAELFASNFKDMDY-VKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLG 446 (773)
Q Consensus 374 ~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la 446 (773)
.+.++..|...+.++. ++++ +.+...+.. .....+++|||++|++|.++..... .......+.
T Consensus 45 ------~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~ 114 (272)
T cd06637 45 ------EEEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 114 (272)
T ss_pred ------cHHHHHHHHHHHHHhc----CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHH
Confidence 0112334444444332 1222 222222211 1234689999999999998654322 223333333
Q ss_pred HHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-
Q 004115 447 RYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM- 523 (773)
Q Consensus 447 ~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l- 523 (773)
... +...+..+|..|++|+|+||+||++++ ++.++++|||++..+....... ....+...++++++...
T Consensus 115 ~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~ 186 (272)
T cd06637 115 YICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACD 186 (272)
T ss_pred HHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEccCCCceecccccccC------CcccccccccCHhHhccc
Confidence 222 334468899999999999999999986 7899999999988765432211 01123444556666542
Q ss_pred ----CCCCCCCChHHHHHHHHHHHH
Q 004115 524 ----GVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 524 ----G~~~~~~D~~~l~~~i~~~l~ 544 (773)
+......|++++...+.+++.
T Consensus 187 ~~~~~~~~~~~Dv~slGv~l~el~~ 211 (272)
T cd06637 187 ENPDATYDFKSDLWSLGITAIEMAE 211 (272)
T ss_pred cCcCCCCCchhhHHHHHHHHHHHHh
Confidence 233456899999877766653
No 188
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.34 E-value=1e-11 Score=139.65 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=60.1
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|++|.||++++ ++.++++|||++..+.......- .........+++++...-+...+..|
T Consensus 248 ~aL~~LH~~~ivH~dikp~Nill~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 321 (400)
T cd05105 248 RGMEFLASKNCVHRDLAARNVLLAQ--GKIVKICDFGLARDIMHDSNYVS----KGSTFLPVKWMAPESIFDNLYTTLSD 321 (400)
T ss_pred HHHHHHHhCCeeCCCCChHhEEEeC--CCEEEEEeCCcceeccccccccc----cCCcCCCcceEChhhhcCCCCCchhh
Confidence 3467889999999999999999986 78899999999987643221100 00001123456666665566677789
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 322 iwSlGvil~ell 333 (400)
T cd05105 322 VWSYGILLWEIF 333 (400)
T ss_pred HHHHHHHHHHHH
Confidence 999987776654
No 189
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.34 E-value=9.8e-12 Score=144.75 Aligned_cols=143 Identities=20% Similarity=0.232 Sum_probs=103.2
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+.||.|++|.||+|.+.++.+++|+..+..... . ++...+ ..-.
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~-----------------------------~----~~~~~~-~~~~ 382 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRH-----------------------------P----ELDERL-RTER 382 (535)
T ss_pred ccceeccCCcEEEEEEeecCccceeEEEecccccc-----------------------------h----hHHHHH-HHHH
Confidence 35789999999999999988788888763321110 0 000001 1224
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCc
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 463 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~Gff 463 (773)
+.+|++.+.++++ +++..|.++.......++||||++|.+|.++.. ....++..+ ...+.++|..|++
T Consensus 383 ~~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i-~~~L~~lH~~gii 450 (535)
T PRK09605 383 TRAEARLLSEARR-----AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKV-GEIVAKLHKAGIV 450 (535)
T ss_pred HHHHHHHHHhhcc-----cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHH-HHHHHHHHhCCCc
Confidence 6678888777743 457778888766677899999999999988643 123344433 3457889999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
|+|+||+||++. +++++++|||+++..++
T Consensus 451 HrDlkp~NILl~---~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 451 HGDLTTSNFIVR---DDRLYLIDFGLGKYSDL 479 (535)
T ss_pred cCCCChHHEEEE---CCcEEEEeCcccccCCc
Confidence 999999999994 68999999999988654
No 190
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.34 E-value=5.3e-12 Score=141.27 Aligned_cols=176 Identities=13% Similarity=0.063 Sum_probs=112.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||||+... . .
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------------------------------------------~------~ 129 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------------------------------------------G------G 129 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh------------------------------------------h------h
Confidence 6799999999999998 689999995310 0 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|++.+.++. +++| .+-..+ ......++|||++.| .+.+.... ........+.... +...+..+|..
T Consensus 130 ~~~E~~il~~l~-----HpnIv~~~~~~-~~~~~~~lv~e~~~~-~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 130 TATEAHILRAIN-----HPSIIQLKGTF-TYNKFTCLILPRYKT-DLYCYLAA-KRNIAICDILAIERSVLRAIQYLHEN 201 (391)
T ss_pred hHHHHHHHHhCC-----CCCCCCEeEEE-EECCeeEEEEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234554444442 2333 222222 345567999999975 55544321 1233433333322 22347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||+||+++. ++.++|+|||++........... .-..+.+.++++++..-+...+..|++++...++
T Consensus 202 ~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 274 (391)
T PHA03212 202 RIIHRDIKAENIFINH--PGDVCLGDFGAACFPVDINANKY-----YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLF 274 (391)
T ss_pred CcccCCCChHhEEEcC--CCCEEEEeCCccccccccccccc-----ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999999999985 78999999999865432211111 0112445556666665555667789999998887
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 275 ellt 278 (391)
T PHA03212 275 EMAT 278 (391)
T ss_pred HHHH
Confidence 7764
No 191
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.34 E-value=1.9e-11 Score=130.93 Aligned_cols=182 Identities=16% Similarity=0.179 Sum_probs=111.1
Q ss_pred ccccccceeEEEEEee--cCeeE--EEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEV--VVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~V--AVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.||.|++|+||+|++ +|..+ ++|.......+ .. .
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~-----------------------------------~~------~ 51 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-----------------------------------DD------H 51 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCH-----------------------------------HH------H
Confidence 6899999999999998 46554 55544221100 00 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKR 444 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d~~~ 444 (773)
-++.+|...+.++. ++++ +++++ .......+++|||++|++|.++..... ..++...
T Consensus 52 ~~~~~Ei~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (303)
T cd05088 52 RDFAGELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 125 (303)
T ss_pred HHHHHHHHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHH
Confidence 13344444444442 2233 33333 234456799999999999988653211 1123333
Q ss_pred HHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004115 445 LGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 445 la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~ 522 (773)
+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||++........... ......+++++...
T Consensus 126 ~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~-------~~~~~~y~aPE~~~ 196 (303)
T cd05088 126 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKTM-------GRLPVRWMAIESLN 196 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchheEEecC--CCcEEeCccccCcccchhhhccc-------CCCcccccCHHHHh
Confidence 33332 223468889999999999999999985 78999999999864322111100 01122345555555
Q ss_pred cCCCCCCCChHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l 543 (773)
-....+..|++++...+.+++
T Consensus 197 ~~~~~~~~Di~slG~il~ell 217 (303)
T cd05088 197 YSVYTTNSDVWSYGVLLWEIV 217 (303)
T ss_pred ccCCcccccchhhhhHHHHHH
Confidence 555667789999988777665
No 192
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.34 E-value=5e-12 Score=134.82 Aligned_cols=180 Identities=15% Similarity=0.153 Sum_probs=113.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|.||+|.. +|+.||||...-.... -.+ .
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~------~ 65 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ------------------------------------RRE------L 65 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHH------------------------------------HHH------H
Confidence 5699999999999998 6899999976211000 001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+.+|...+..+. ++++ .+...+ ......+++|||++|.++.++... ...+...+..... -..+..+|..
T Consensus 66 ~~~e~~~l~~l~-----h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~ 137 (292)
T cd06658 66 LFNEVVIMRDYH-----HENVVDMYNSY-LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQ 137 (292)
T ss_pred HHHHHHHHHhCC-----CCcHHHHHHhe-ecCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 233333333221 1221 111112 224567999999999999886532 2234444333332 2346789999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+....... ....+...++++++..-.......|++++...+.
T Consensus 138 ~ivH~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 209 (292)
T cd06658 138 GVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVPKR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 209 (292)
T ss_pred CEeecCCCHHHEEEcC--CCCEEEccCcchhhcccccccC------ceeecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999999999985 7899999999987654332211 0012344566666665555566789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 210 el~ 212 (292)
T cd06658 210 EMI 212 (292)
T ss_pred HHH
Confidence 654
No 193
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.34 E-value=1.4e-11 Score=126.74 Aligned_cols=187 Identities=18% Similarity=0.110 Sum_probs=113.8
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||+|++|+||+|+. +|+.|++|+....-... . ..+..+.+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------~---~~~~~~~~---- 49 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ----------------------------T---GQEAVKQL---- 49 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc----------------------------c---chHHHHHH----
Confidence 36799999999999998 68999999874322110 0 01111222
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.+|..-+.++. +..-+.+.... ......+++|||++|.+|.++.... ...+...+...+ +...+..+|..
T Consensus 50 --~~e~~~l~~~~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 50 --EQEIALLSKLQ----HPNIVQYLGTE-REEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred --HHHHHHHHhcC----CCCchheeeeE-ecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 23333222221 11112222222 2235679999999999998875322 123333332222 23346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~-~~~~~D~~~l~~~i 539 (773)
|++|+|++|+||+++. ++.++++|||+...+...... ....++..++.++....+. .....|++++...+
T Consensus 122 ~i~H~dl~~~ni~~~~--~~~~kl~d~~~~~~~~~~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l 192 (258)
T cd06632 122 NTVHRDIKGANILVDT--NGVVKLADFGMAKQVVEFSFA-------KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTV 192 (258)
T ss_pred CcccCCCCHHHEEECC--CCCEEEccCccceeccccccc-------cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHH
Confidence 9999999999999985 889999999998876543310 1112344455555554433 45567999888766
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 193 ~~l~ 196 (258)
T cd06632 193 LEMA 196 (258)
T ss_pred HHHH
Confidence 6554
No 194
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.33 E-value=1.4e-11 Score=128.39 Aligned_cols=181 Identities=19% Similarity=0.168 Sum_probs=113.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.||+|+.+...... + . .
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~-~------~ 52 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGED-----------------------------------F-A------V 52 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhH-----------------------------------H-H------H
Confidence 5799999999999998 68999999985432111 0 0 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+.+|...+..+ +++++ .+...+ ......+++|||++|++|.++.... ...+...+..... ...+..+|..
T Consensus 53 ~~~e~~~~~~l-----~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~ 125 (267)
T cd06645 53 VQQEIIMMKDC-----KHSNIVAYFGSY-LRRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSK 125 (267)
T ss_pred HHHHHHHHHhC-----CCCCeeeEEEEE-EeCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22333222222 12322 222222 2345679999999999999864322 2234444333322 2346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRR 537 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG~~~~~~D~~~l~~ 537 (773)
|++|+|++|.||+++. ++.++++|||++..+....... ....+...+++++... .+......|++++..
T Consensus 126 ~i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~ 197 (267)
T cd06645 126 GKMHRDIKGANILLTD--NGHVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGI 197 (267)
T ss_pred CeecCCCCHHHEEECC--CCCEEECcceeeeEccCccccc------ccccCcccccChhhhccccCCCCCchhhhHHHHH
Confidence 9999999999999985 7899999999988765322110 0112344566666653 333456689999987
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 198 il~~l~ 203 (267)
T cd06645 198 TAIELA 203 (267)
T ss_pred HHHHHh
Confidence 665543
No 195
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.33 E-value=6.6e-12 Score=137.22 Aligned_cols=198 Identities=18% Similarity=0.215 Sum_probs=119.6
Q ss_pred HHHHhCCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 004115 288 VEEELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK 364 (773)
Q Consensus 288 ie~elG~~~~eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~ 364 (773)
+++|++..+.++.+.|.. ++||.|.+|.||+|.. +|+.||||+........
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------- 55 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSE-------------------------- 55 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccch--------------------------
Confidence 356666666666666654 7899999999999998 69999999864321100
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcC
Q 004115 365 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELG 439 (773)
Q Consensus 365 ~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~~ 439 (773)
.... .+.+|+..+.++.+ ..-+.+..++. ......++||||+ |..+.++... ..
T Consensus 56 --------~~~~------~~~~E~~~l~~l~h----~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~ 114 (343)
T cd07880 56 --------LFAK------RAYRELRLLKHMKH----ENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EK 114 (343)
T ss_pred --------HHHH------HHHHHHHHHHhcCC----CCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CC
Confidence 0111 23344444444422 11122222221 1123458999999 6688776432 22
Q ss_pred CCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004115 440 VDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 517 (773)
Q Consensus 440 ~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~ 517 (773)
.+...+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||++..+...... ......++.
T Consensus 115 l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~a 183 (343)
T cd07880 115 LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQTDSEMTG---------YVVTRWYRA 183 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccccccccCccc---------cccCCcccC
Confidence 3333332222 223478899999999999999999985 789999999999876543210 012223344
Q ss_pred HHHHHc-CCCCCCCChHHHHHHHHHHH
Q 004115 518 QAMVQM-GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 518 ~~l~~l-G~~~~~~D~~~l~~~i~~~l 543 (773)
++...- .......|.+++...+.+++
T Consensus 184 PE~~~~~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 184 PEVILNWMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 444432 22445578888887666554
No 196
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.33 E-value=2.8e-11 Score=125.87 Aligned_cols=186 Identities=13% Similarity=0.051 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||..++-... + ...+.+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------------------~-----------~~~~~~ 48 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----------------------------D-----------AKARQD 48 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----------------------------C-----------HHHHHH
Confidence 6799999999999998 6899999976321000 0 011234
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHH--HHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
|.+|...+.++. ++++.-..-+.......+++|||++|++|.++... . ....+...+...+ +...+..+|
T Consensus 49 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08228 49 CVKEIDLLKQLN-----HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123 (267)
T ss_pred HHHHHHHHHhCC-----CcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 555555444442 23222111122234567999999999999886532 1 1113333333222 223467789
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||+++. ++.++++|||++..+...... .....+...+++++...........|++++...
T Consensus 124 ~~~i~H~dl~~~nil~~~--~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~ 195 (267)
T cd08228 124 SRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 195 (267)
T ss_pred hCCeeCCCCCHHHEEEcC--CCCEEECccccceeccchhHH------HhcCCCCccccChhhhccCCCCchhhHHHHHHH
Confidence 999999999999999985 789999999998887654321 011234455566665544444566788888776
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 196 l~el~ 200 (267)
T cd08228 196 LYEMA 200 (267)
T ss_pred HHHHh
Confidence 65554
No 197
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.33 E-value=2.1e-11 Score=126.44 Aligned_cols=180 Identities=21% Similarity=0.211 Sum_probs=111.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+++|.|++|+||+|+. +|+.||||+.+...... .. ...+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~--------------------------------~~-------~~~~ 42 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA--------------------------------KN-------QVTN 42 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH--------------------------------HH-------HHHH
Confidence 5799999999999998 68999999874210000 00 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+..|...+. ... +++ .+++++.. .....+++|||++|++|.++.... ...+...+...+ +-..+..+|.
T Consensus 43 ~~~e~~~~~---~~~-~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~ 115 (260)
T cd05611 43 VKAERAIMM---IQG-ESP--YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQ 115 (260)
T ss_pred HHHHHHHHh---hcC-CCC--CeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 222221111 111 222 23333322 234579999999999999875321 123333333222 2234678999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||+++. ++.++++|||+....... ....++..++.++...-+......|.+++...+
T Consensus 116 ~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il 183 (260)
T cd05611 116 RGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGLEN----------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVI 183 (260)
T ss_pred CCeecCCCCHHHeEECC--CCcEEEeecccceecccc----------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHH
Confidence 99999999999999985 789999999988765431 112244455556655544456678999988777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
++++
T Consensus 184 ~~l~ 187 (260)
T cd05611 184 FEFL 187 (260)
T ss_pred HHHH
Confidence 6654
No 198
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.33 E-value=1.7e-11 Score=128.81 Aligned_cols=186 Identities=16% Similarity=0.091 Sum_probs=115.0
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..||.|++|+||+|.+. ++.||||+.+.....
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~----------------------------------------- 50 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM----------------------------------------- 50 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH-----------------------------------------
Confidence 67999999999999863 467999976322100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------CCCHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA 449 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------~~d~~~la~~l 449 (773)
....+|.+|+..+..+. ++++.-..-+....+..++||||++|++|.++...... ..+...+...+
T Consensus 51 ~~~~~~~~e~~~l~~l~-----~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (277)
T cd05062 51 RERIEFLNEASVMKEFN-----CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMA 125 (277)
T ss_pred HHHHHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHH
Confidence 01123445554443332 23322111122334568999999999999987532111 12223333322
Q ss_pred --HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 450 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 450 --i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
+...+..+|..|++|+|+||.||++++ ++.++++|||++..+........ .........+++++...-+...
T Consensus 126 ~~l~~~l~~lH~~~~vH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 199 (277)
T cd05062 126 GEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFT 199 (277)
T ss_pred HHHHHHHHHHHHCCcccCCcchheEEEcC--CCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhcCCcC
Confidence 234468899999999999999999986 88999999999876543211000 0001113456677776666677
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
+..|++++...+.+++
T Consensus 200 ~~~Di~slG~~l~el~ 215 (277)
T cd05062 200 TYSDVWSFGVVLWEIA 215 (277)
T ss_pred chhHHHHHHHHHHHHH
Confidence 7789999887766554
No 199
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.33 E-value=2.1e-11 Score=128.07 Aligned_cols=182 Identities=15% Similarity=0.156 Sum_probs=115.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +++.||+|+.+...... .-+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------------~~~ 48 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE------------------------------------------LED 48 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH------------------------------------------HHH
Confidence 5699999999999998 58999999874321110 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
|..|+..+.++. ++++ .+...+ ......++||||++|+.|.++.......++...+...+.+ ..+..+|..
T Consensus 49 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 49 FMVEIDILSECK-----HPNIVGLYEAY-FYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred HHHHHHHHHhCC-----CCceeEEEEEE-ecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 455555444442 2322 222222 2345679999999999998875432223444444333322 346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAV 535 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~~~~D~~~l 535 (773)
|++|+|++|.||+++. ++.++++|||............. ...+.+.++.+++... .......|.+++
T Consensus 123 ~i~h~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl 194 (280)
T cd06611 123 KVIHRDLKAGNILLTL--DGDVKLADFGVSAKNKSTLQKRD------TFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194 (280)
T ss_pred CcccCCCChhhEEECC--CCCEEEccCccchhhcccccccc------eeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence 9999999999999985 88999999998876543321110 1123444566665542 123345799998
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+.+++
T Consensus 195 G~il~~l~ 202 (280)
T cd06611 195 GITLIELA 202 (280)
T ss_pred HHHHHHHH
Confidence 87666554
No 200
>PHA02988 hypothetical protein; Provisional
Probab=99.33 E-value=2.5e-11 Score=129.16 Aligned_cols=183 Identities=11% Similarity=0.011 Sum_probs=117.6
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+...++.|+++.||+|.++|+.||||+.+...... ..++ -+
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~----------~~ 64 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGH-----------------------------KVLI----------DI 64 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEecccccccc-----------------------------HHHH----------HH
Confidence 44679999999999999999999999874321100 0011 13
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee---c---cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW---E---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~---e---~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~ 455 (773)
|.+|+..+.++.+ + .+.+++. + .....+++|||++|++|.++.... ...+.......+. ...+.
T Consensus 65 ~~~E~~~l~~l~h-----~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~ 136 (283)
T PHA02988 65 TENEIKNLRRIDS-----N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLY 136 (283)
T ss_pred HHHHHHHHHhcCC-----C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHH
Confidence 4566666666532 2 2333332 2 123568999999999999875432 2233332222222 23367
Q ss_pred HHHh-CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCCh
Q 004115 456 QILS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDT 532 (773)
Q Consensus 456 qI~~-~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l--G~~~~~~D~ 532 (773)
.+|. .|++|+|++|.||+++. ++.++++|||++..++...-. ..+...++++++..- +..+...|+
T Consensus 137 ~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~k~Di 205 (283)
T PHA02988 137 NLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGLEKILSSPPFK---------NVNFMVYFSYKMLNDIFSEYTIKDDI 205 (283)
T ss_pred HHHhcCCCCCCcCChhhEEECC--CCcEEEcccchHhhhcccccc---------ccCcccccCHHHhhhccccccchhhh
Confidence 7887 59999999999999986 789999999998866543211 012334455555432 445667899
Q ss_pred HHHHHHHHHHHH
Q 004115 533 TAVRRTAQFFLN 544 (773)
Q Consensus 533 ~~l~~~i~~~l~ 544 (773)
+++...+.+++.
T Consensus 206 ~SlGvil~el~~ 217 (283)
T PHA02988 206 YSLGVVLWEIFT 217 (283)
T ss_pred hHHHHHHHHHHH
Confidence 999987776653
No 201
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.33 E-value=1e-11 Score=131.60 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=112.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.|++|+......+. .-+
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~ 55 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE------------------------------------------LED 55 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHH------------------------------------------HHH
Confidence 4699999999999998 58999999874321100 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
+..|...+..+. +++ +++++. ......++||||++|..+..+........+...+...+. ...+..+|.
T Consensus 56 ~~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 128 (292)
T cd06644 56 YMVEIEILATCN-----HPY--IVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS 128 (292)
T ss_pred HHHHHHHHHhCC-----CCc--EeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 445555554432 222 222222 335678999999999998775432223344444333322 234678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCChHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTA 534 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~~~~D~~~ 534 (773)
.|++|+|+||.||+++. ++.++|+|||++.......... ....++..+++++++.. .......|.++
T Consensus 129 ~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 200 (292)
T cd06644 129 MKIIHRDLKAGNVLLTL--DGDIKLADFGVSAKNVKTLQRR------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 200 (292)
T ss_pred CCeeecCCCcceEEEcC--CCCEEEccCccceecccccccc------ceecCCccccCceeeccccccCCCCCchhhhHh
Confidence 99999999999999975 7899999999887643321110 00123334555554421 11234578999
Q ss_pred HHHHHHHHH
Q 004115 535 VRRTAQFFL 543 (773)
Q Consensus 535 l~~~i~~~l 543 (773)
+...+.+++
T Consensus 201 lG~il~el~ 209 (292)
T cd06644 201 LGITLIEMA 209 (292)
T ss_pred HHHHHHHHh
Confidence 887766654
No 202
>PTZ00284 protein kinase; Provisional
Probab=99.33 E-value=6.3e-12 Score=143.48 Aligned_cols=187 Identities=14% Similarity=0.092 Sum_probs=111.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|+||.||+|++ .|+.||||+.+... ........|+.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-------------------------------------~~~~~~~~e~~ 177 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-------------------------------------KYTRDAKIEIQ 177 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecch-------------------------------------hhHHHHHHHHH
Confidence 5799999999999998 58999999874210 00111223444
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-C
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS-H 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~-~ 460 (773)
+..+.+.... ......+.+...+..-....++|||++ |..+.++.. ....+....+...+. ...+..+|. .
T Consensus 178 ~l~~l~~~~~----~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~ 251 (467)
T PTZ00284 178 FMEKVRQADP----ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVALDYFHTEL 251 (467)
T ss_pred HHHHHhhcCc----ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4333322111 001112223333333334579999998 556665432 112234433333332 234788897 5
Q ss_pred CCccCCCCCCceEEeccC--------------CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004115 461 GFFHADPHPGNIAVDDVN--------------GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 526 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~--------------~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~ 526 (773)
|++|+|+||+|||++... ...++|+|||.+....... ....+...+++++++.-+..
T Consensus 252 gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~---------~~~~gt~~Y~APE~~~~~~~ 322 (467)
T PTZ00284 252 HLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR---------TAIVSTRHYRSPEVVLGLGW 322 (467)
T ss_pred CeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc---------ccccCCccccCcHHhhcCCC
Confidence 999999999999997511 1259999999875433221 11234567777877765555
Q ss_pred CCCCChHHHHHHHHHHHH
Q 004115 527 VPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 527 ~~~~D~~~l~~~i~~~l~ 544 (773)
....|++++...+++++.
T Consensus 323 ~~~~DiwSlGvil~ellt 340 (467)
T PTZ00284 323 MYSTDMWSMGCIIYELYT 340 (467)
T ss_pred CcHHHHHHHHHHHHHHHh
Confidence 667899999988777653
No 203
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.33 E-value=1.7e-11 Score=127.32 Aligned_cols=181 Identities=15% Similarity=0.146 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||+|++|.||+|.. +|+.||||..+++... .-+|
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-------------------------------------------PEAF 48 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCc-------------------------------------------HHHH
Confidence 5799999999999998 7899999987432210 0134
Q ss_pred HHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.+|...+.++. +++ +.+..++ .....+++|||++|++|.++.... ....+.......+ +-..+..+|..
T Consensus 49 ~~E~~~l~~l~-----h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~ 121 (260)
T cd05067 49 LAEANLMKQLQ-----HPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK 121 (260)
T ss_pred HHHHHHHHhcC-----CcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 55555454442 222 2222222 134579999999999998865322 2233444433332 22347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.+.+.|||++..+........ ........++.++....+...+..|++++...+.
T Consensus 122 ~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05067 122 NYIHRDLRAANILVSE--TLCCKIADFGLARLIEDNEYTAR-----EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 194 (260)
T ss_pred CeecccccHHhEEEcC--CCCEEEccCcceeecCCCCcccc-----cCCcccccccCHHHhccCCcCcccchHHHHHHHH
Confidence 9999999999999986 78999999999988763221100 0111223456666666666677789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 195 el~ 197 (260)
T cd05067 195 EIV 197 (260)
T ss_pred HHH
Confidence 654
No 204
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.33 E-value=3.5e-12 Score=143.00 Aligned_cols=184 Identities=16% Similarity=0.174 Sum_probs=132.4
Q ss_pred ccccccceeEEEEEeecCe-eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGE-EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~-~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.-||+|-||.||.|.++|. +||||.++++.- .+-+|
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-------------------------------------------~~~~f 248 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-------------------------------------------SPEAF 248 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc-------------------------------------------ChhHH
Confidence 3589999999999999876 999999977621 12268
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li~~~--l~qI~~~G 461 (773)
..||+-|.++++. .-|..-.|.. .....+|||||++-++|.++... ....++..++.....+.+ +..+-+++
T Consensus 249 ~~Ea~iMk~L~H~----~lV~l~gV~~-~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~ 323 (468)
T KOG0197|consen 249 LREAQIMKKLRHE----KLVKLYGVCT-KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN 323 (468)
T ss_pred HHHHHHHHhCccc----CeEEEEEEEe-cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC
Confidence 8999988887652 1222222221 11246999999999999998764 334456667776665555 66678999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|||+-.-||||++ +..+++.||||++.+.++....- .-..--....+++.+..|..+...|+++|...+.+
T Consensus 324 ~IHRDLAARNiLV~~--~~~vKIsDFGLAr~~~d~~Y~~~-----~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E 396 (468)
T KOG0197|consen 324 YIHRDLAARNILVDE--DLVVKISDFGLARLIGDDEYTAS-----EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWE 396 (468)
T ss_pred ccchhhhhhheeecc--CceEEEcccccccccCCCceeec-----CCCCCCceecCHHHHhhCCcccccceeehhhhHHH
Confidence 999999999999986 88999999999996655432110 00011234456777788888889999999988777
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 397 ~fT 399 (468)
T KOG0197|consen 397 LFT 399 (468)
T ss_pred Hhc
Confidence 654
No 205
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.33 E-value=1.6e-11 Score=129.02 Aligned_cols=185 Identities=14% Similarity=0.116 Sum_probs=119.1
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||+|++|+||+|++ +|+ .||+|+..+.... .
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~-----------------------------------------~ 51 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP-----------------------------------------K 51 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH-----------------------------------------H
Confidence 6899999999999997 343 5899976432210 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 457 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI 457 (773)
....+.+|+..+.++. +..-+.+.... .+...+++|||++|++|.+.........+...+...+.+ ..+..+
T Consensus 52 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L 125 (279)
T cd05057 52 ANKEILDEAYVMASVD----HPHVVRLLGIC--LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYL 125 (279)
T ss_pred HHHHHHHHHHHHHhCC----CCCcceEEEEE--ecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1224556666666552 21112222222 236789999999999999875433333455544443333 347889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|++|.||++++ ++.++|.|||++..+...... +. ..-......++.++....+......|.+++..
T Consensus 126 H~~~i~H~di~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~-~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~ 199 (279)
T cd05057 126 EEKRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLDVDEKE-YH---AEGGKVPIKWMALESILHRIYTHKSDVWSYGV 199 (279)
T ss_pred HhCCEEecccCcceEEEcC--CCeEEECCCcccccccCcccc-ee---cCCCcccccccCHHHhhcCCcCchhhHHHHHH
Confidence 9999999999999999985 789999999999877643221 10 00001123455566655566667789999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 200 ~l~el~ 205 (279)
T cd05057 200 TVWELM 205 (279)
T ss_pred HHHHHh
Confidence 666554
No 206
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.33 E-value=1.7e-11 Score=130.98 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=112.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|+||+|.. +|+.||||+........ .. .
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~------------------------------------~~------~ 64 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR------------------------------------RE------L 64 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch------------------------------------HH------H
Confidence 3699999999999998 68999999873221100 00 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|...+..+ +++++ .+...+ ......+++|||++|.++.++... ...+...+...+ +-..+..+|..
T Consensus 65 ~~~e~~~l~~l-----~hp~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~ 136 (297)
T cd06659 65 LFNEVVIMRDY-----QHQNVVEMYKSY-LVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQ 136 (297)
T ss_pred HHHHHHHHHhC-----CCCchhhhhhhe-eeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22233222222 11221 111111 224567999999999999886432 223433333322 22346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|+||+++. ++.++|+|||++..+....... ....+...+++++...-+......|++++...+.
T Consensus 137 ~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 208 (297)
T cd06659 137 GVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKR------KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVI 208 (297)
T ss_pred CeecCCCCHHHeEEcc--CCcEEEeechhHhhcccccccc------cceecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999999999985 8999999999987665432211 0112344556666665555566789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 209 el~ 211 (297)
T cd06659 209 EMV 211 (297)
T ss_pred HHH
Confidence 654
No 207
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.32 E-value=1.5e-11 Score=128.05 Aligned_cols=182 Identities=15% Similarity=0.121 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
..||+|++|+||+|.+ .+..||+|+.+++-.. +-+|
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-------------------------------------------PEAF 48 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc-------------------------------------------HHHH
Confidence 5799999999999998 4568999987543110 0124
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.+|.+.+.++. +..-+.+...+ .....+++|||++|++|.++..... ...+...+.... +...+..+|..|
T Consensus 49 ~~E~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05069 49 LQEAQIMKKLR----HDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122 (260)
T ss_pred HHHHHHHHhCC----CCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44555444432 22223333333 2345799999999999988653221 113333332222 223467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|+||++++ ++.++|+|||.+..+......... -......++.++....+......|++++...+++
T Consensus 123 i~H~dl~~~Nill~~--~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05069 123 YIHRDLRAANILVGD--NLVCKIADFGLARLIEDNEYTARQ-----GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred EeecccCcceEEEcC--CCeEEECCCccceEccCCcccccC-----CCccchhhCCHHHhccCCcChHHHHHHHHHHHHH
Confidence 999999999999986 789999999999876543211100 0112234555665555556667799998877666
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 196 l~ 197 (260)
T cd05069 196 LV 197 (260)
T ss_pred HH
Confidence 54
No 208
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.32 E-value=2e-11 Score=129.23 Aligned_cols=186 Identities=16% Similarity=0.099 Sum_probs=114.6
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|+.+ +..||||+...... .
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------------------------~ 50 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----------------------------------------L 50 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-----------------------------------------H
Confidence 67999999999999752 45899997632110 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------CCCHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA 449 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------~~d~~~la~~l 449 (773)
....++.+|...+.++. ++++.-..-+.......+++|||++|++|.++...... ......+...+
T Consensus 51 ~~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (288)
T cd05061 51 RERIEFLNEASVMKGFT-----CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 125 (288)
T ss_pred HHHHHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHH
Confidence 11224555655555442 23322222122334567999999999999987532111 11222332222
Q ss_pred --HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 450 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 450 --i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
+...+..+|..|++|+|+||.||+++. ++.++++|||++..+.......-. ........++.++...-+...
T Consensus 126 ~~l~~~l~~lH~~~i~H~dikp~nili~~--~~~~~L~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~ 199 (288)
T cd05061 126 AEIADGMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRKG----GKGLLPVRWMAPESLKDGVFT 199 (288)
T ss_pred HHHHHHHHHHHhCCCcCCCCChheEEEcC--CCcEEECcCCcccccccccccccc----CCCcccccccCHHHhccCCCC
Confidence 233467899999999999999999985 789999999998865432210000 000112345566666556667
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
+..|.+++.-.+.+++
T Consensus 200 ~~~DvwslG~~l~el~ 215 (288)
T cd05061 200 TSSDMWSFGVVLWEIT 215 (288)
T ss_pred hHhHHHHHHHHHHHHH
Confidence 7789999887766554
No 209
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.32 E-value=1.4e-11 Score=128.16 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||+|++|.||.|.. .+..||||..+++-. + +-+|
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-----------------------------~--------------~~~~ 46 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----------------------------S--------------EDEF 46 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcc-----------------------------c--------------HHHH
Confidence 5799999999999998 455799997643210 0 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
.+|...+.++. +++ +++++.. .....+++|||++|+++.++........+...+...+. ...+..+|..
T Consensus 47 ~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 47 IEEAKVMMKLS-----HEK--LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred HHHHHHHhcCC-----CCC--eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 55555554442 232 3344432 23456999999999999886543222344444443332 2336788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||+||++++ ++.++++|||....+....-.... .......++.++...-+......|++++...+.
T Consensus 120 ~i~H~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~~~-----~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~ 192 (256)
T cd05113 120 QFIHRDLAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMW 192 (256)
T ss_pred CeeccccCcceEEEcC--CCCEEECCCccceecCCCceeecC-----CCccChhhCCHHHHhcCcccchhHHHHHHHHHH
Confidence 9999999999999985 789999999998766432110000 001123345566655555666789999887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (256)
T cd05113 193 EVY 195 (256)
T ss_pred HHh
Confidence 554
No 210
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.32 E-value=1.3e-11 Score=137.12 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=62.0
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|+||.||++++ ++.++|+|||++..+........ .........+++++...-+...+..|
T Consensus 223 ~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 296 (374)
T cd05106 223 QGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFDCVYTVQSD 296 (374)
T ss_pred HHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcceee----ccCCCCccceeCHHHhcCCCCCcccc
Confidence 4478899999999999999999985 78999999999987644321111 01111223466677666667778899
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 297 vwSlGvil~ell 308 (374)
T cd05106 297 VWSYGILLWEIF 308 (374)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 211
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.32 E-value=6.5e-12 Score=143.75 Aligned_cols=178 Identities=14% Similarity=0.034 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|.||+|++ .++.||||..... .
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~------------------------------------------------~ 206 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA------------------------------------------------S 206 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc------------------------------------------------C
Confidence 6799999999999999 5889999953100 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
+.+|++.+.++. +++|.-..-+.......+|+||++.| .+.++.......++...+...+.+ ..+..+|..|
T Consensus 207 ~~~E~~iL~~L~-----HpnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g 280 (461)
T PHA03211 207 SVHEARLLRRLS-----HPAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG 280 (461)
T ss_pred HHHHHHHHHHCC-----CCCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 224555454442 23332222222334567999999976 555543222223454444443333 3478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|+||.||+++. ++.++|+|||++..+......... ....+...++++++..-+......|++++...+++
T Consensus 281 IvHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~----~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~E 354 (461)
T PHA03211 281 IIHRDIKTENVLVNG--PEDICLGDFGAACFARGSWSTPFH----YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354 (461)
T ss_pred EEECcCCHHHEEECC--CCCEEEcccCCceecccccccccc----cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 999999999999985 789999999999876443211111 11235666777777765556677899999887776
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 355 l~ 356 (461)
T PHA03211 355 AA 356 (461)
T ss_pred HH
Confidence 64
No 212
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.32 E-value=1.7e-11 Score=126.83 Aligned_cols=184 Identities=14% Similarity=0.073 Sum_probs=116.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|+||++.. +|+.||+|..+-..... . .-+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~----------~~~ 44 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS-------------------------------A----------VED 44 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH-------------------------------H----------HHH
Confidence 6799999999999998 68999999863111000 0 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+..|...+.++ . ++++.-..-..+.....+++|||++|+++.+..... ....+...+...+ +...+..+|..
T Consensus 45 ~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 45 SRKEAVLLAKM----K-HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred HHHHHHHHHhC----C-CCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 23344333333 2 233322222223456679999999999988764322 1223333333222 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+....... ....++..++++++..-....+..|++++...+.
T Consensus 120 ~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~ 191 (255)
T cd08219 120 RVLHRDIKSKNIFLTQ--NGKVKLGDFGSARLLTSPGAYA------CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILY 191 (255)
T ss_pred CcccCCCCcceEEECC--CCcEEEcccCcceeeccccccc------ccccCCccccCHHHHccCCcCchhhhhhhchhhe
Confidence 9999999999999985 8899999999998775432211 1123445566666666555667789998887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 192 ~l~ 194 (255)
T cd08219 192 ELC 194 (255)
T ss_pred ehh
Confidence 554
No 213
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.32 E-value=1.5e-11 Score=127.99 Aligned_cols=184 Identities=15% Similarity=0.086 Sum_probs=115.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|+. +|+.|+||.....- .. .....-+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-------------------------------~~--------~~~~~~~ 48 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-------------------------------LM--------DAKARAD 48 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehh-------------------------------hh--------hHHHHHH
Confidence 6799999999999997 79999999652100 00 0001124
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~l--i~~~l~q 456 (773)
|.+|.+-+..+. +++ +++++.. .....+++|||++|++|.++... . ....+...+...+ +...+..
T Consensus 49 ~~~e~~~l~~~~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 49 CIKEIDLLKQLN-----HPN--VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred HHHHHHHHHHcc-----CCc--hhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 455554444432 222 2222221 23457999999999999886532 1 1123333333332 2234678
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
+|..|++|+|++|.||+++. ++.+++.|||++..+...... . ....+...+++++...........|++++.
T Consensus 122 LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~--~----~~~~~~~~~~ape~~~~~~~~~~~Dv~slG 193 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA--A----HSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred HHHCCeecCCCCHHHEEEcC--CCCEEECcchhhhccccCCcc--c----ccccCCcCccCHHHhcCCCccchhhHHHHH
Confidence 89999999999999999985 789999999998876543211 0 011234445555555544556678999998
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 194 ~il~~l~ 200 (267)
T cd08229 194 CLLYEMA 200 (267)
T ss_pred HHHHHHH
Confidence 7776654
No 214
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.32 E-value=1.8e-11 Score=129.06 Aligned_cols=184 Identities=15% Similarity=0.103 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||.|++|+||.++. +|+.||+|+.+......
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 48 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ----------------------------------------- 48 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH-----------------------------------------
Confidence 6799999999988653 47899999875432110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee---cc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW---EY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SY 453 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~---e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~ 453 (773)
.+-.|.+|.+.+.++. +++ +++.+. .. ....+++|||++|++|.++... ...+...+...+.+ ..
T Consensus 49 ~~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~ 119 (283)
T cd05080 49 NTSGWKKEINILKTLY-----HEN--IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEG 119 (283)
T ss_pred HHHHHHHHHHHHHhCC-----CCC--EeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHH
Confidence 0123445555454442 232 222222 11 1236899999999999887532 23455444443333 34
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|..|++|+|++|.||+++. ++.+++.|||++..+.......-. .........++.++....+...+..|.+
T Consensus 120 l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~ 194 (283)
T cd05080 120 MAYLHSQHYIHRDLAARNVLLDN--DRLVKIGDFGLAKAVPEGHEYYRV---REDGDSPVFWYAVECLKENKFSYASDVW 194 (283)
T ss_pred HHHHHHCCeeccccChheEEEcC--CCcEEEeecccccccCCcchhhcc---CCCCCCCceeeCHhHhcccCCCcccccH
Confidence 78899999999999999999985 789999999998877543211000 0000112224455555556667788999
Q ss_pred HHHHHHHHHHH
Q 004115 534 AVRRTAQFFLN 544 (773)
Q Consensus 534 ~l~~~i~~~l~ 544 (773)
++...+.+++.
T Consensus 195 slG~~l~el~t 205 (283)
T cd05080 195 SFGVTLYELLT 205 (283)
T ss_pred HHHHHHHHHHh
Confidence 99988777654
No 215
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.32 E-value=2.5e-11 Score=126.20 Aligned_cols=121 Identities=13% Similarity=0.106 Sum_probs=80.0
Q ss_pred eEEEEeecCCCChhhhhhhhhc-----CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecc
Q 004115 417 QILTMEYVPGIKINRIQSLDEL-----GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 489 (773)
Q Consensus 417 ~vLVMEyieG~~L~d~~~l~~~-----~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGl 489 (773)
.+++|||++|+++.++...... ..+...+...+ +-..+..+|..|++|+|++|.||++++ ++.++++|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeEEECCccc
Confidence 5999999999999876532211 23333333322 223478899999999999999999986 78999999999
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 490 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 490 v~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+..+......... ........++.+.....+......|++++...+++++
T Consensus 160 ~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~ 209 (273)
T cd05035 160 SKKIYSGDYYRQG----RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 209 (273)
T ss_pred eeecccccccccc----ccccCCccccCHhhcccCCCCcccchHHHHHHHHHHH
Confidence 8876443211000 0011123345555555555667789999988777654
No 216
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.32 E-value=2.1e-11 Score=127.20 Aligned_cols=184 Identities=14% Similarity=0.055 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|++|.||+|++ +++.|++|......... .-+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~------------------------------------------~~~ 51 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY------------------------------------------VQP 51 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH------------------------------------------HHH
Confidence 6799999999999998 57899999763321100 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC--CHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~--d~~~la~~--li~~~l~qI~~ 459 (773)
+.+|+..+.+++ ++++.-..-+.......+++|||++|.+|.++........ +...+... .+...+..+|.
T Consensus 52 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 52 LHEEIALHSYLK-----HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred HHHHHHHHHhcC-----CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 445555555443 2332211112223356799999999999998754322222 33333322 23345778899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRR 537 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~--~~~~~D~~~l~~ 537 (773)
.|++|+|++|.||+++. .++.++++|||++..+....... ....++..+++++....+. .....|++++..
T Consensus 127 ~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGv 199 (268)
T cd06624 127 NQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199 (268)
T ss_pred CCEeecCCCHHHEEEcC-CCCeEEEecchhheecccCCCcc------ccCCCCccccChhhhccccccCCchhhhHHHHH
Confidence 99999999999999974 35789999999988764322100 0112344555666554332 345679999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 200 vl~~l~ 205 (268)
T cd06624 200 TIVEMA 205 (268)
T ss_pred HHHHHH
Confidence 766654
No 217
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.32 E-value=1.7e-11 Score=127.09 Aligned_cols=182 Identities=14% Similarity=0.134 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||.|++|.||+|.. +|+.||+|+........ . ...-+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~----------~~~~~ 46 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-----------------------------K----------GSVRN 46 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-----------------------------h----------hHHHH
Confidence 6899999999999999 58999999874211000 0 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
+..|.+.+.++. ++++ +.++. +.....+++|||++|.+|.+..... ...+...+...+. ...+..+|.
T Consensus 47 ~~~e~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~ 118 (258)
T cd05578 47 VLNERRILQELN-----HPFL--VNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHS 118 (258)
T ss_pred HHHHHHHHHhCC-----CCCh--HHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHh
Confidence 344444444332 1221 22221 2234579999999999998865332 2344444443332 234778899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||+++. ++.++++|||....+...... ....++..++.++...-.......|.+++...+
T Consensus 119 ~~i~h~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 119 KGIIHRDIKPDNILLDE--QGHVHITDFNIATKVTPDTLT-------TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred CCeeccCCCHHHeEEcC--CCCEEEeecccccccCCCccc-------cccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 99999999999999985 889999999998877654311 112345566677776655566778999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
++++
T Consensus 190 ~~l~ 193 (258)
T cd05578 190 YECL 193 (258)
T ss_pred HHHH
Confidence 6655
No 218
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.32 E-value=1.3e-11 Score=128.96 Aligned_cols=188 Identities=15% Similarity=0.159 Sum_probs=115.5
Q ss_pred ccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+-||.|++|.||+|++ +| ..||||+......+. .
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~------ 48 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEK-----------------------------------Q------ 48 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHH-----------------------------------H------
Confidence 5699999999999998 34 369999874322110 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~ 458 (773)
--+|..|+..+..+. ++++.-..-+.......++||||++|++|.++........+...+..... ...+..+|
T Consensus 49 ~~~~~~e~~~l~~l~-----h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH 123 (269)
T cd05065 49 RRDFLSEASIMGQFD-----HPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS 123 (269)
T ss_pred HHHHHHHHHHHHhCC-----CcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 013445555444432 23332222222334567999999999999887644333345544443332 23467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~-l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
..|++|+|+||.||++++ ++.+++.|||....+....... +.... + ......++.++...-+......|++++..
T Consensus 124 ~~g~~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~-~-~~~~~~y~~PE~~~~~~~~~~~DvwslG~ 199 (269)
T cd05065 124 EMNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSSL-G-GKIPIRWTAPEAIAYRKFTSASDVWSYGI 199 (269)
T ss_pred HCCEeecccChheEEEcC--CCcEEECCCccccccccCcccccccccc-C-CCcceeecCHhHhccCcccchhhhhhhHH
Confidence 999999999999999975 7899999999987664322110 00000 0 00012345555555555566789998887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 200 ~l~e~l 205 (269)
T cd05065 200 VMWEVM 205 (269)
T ss_pred HHHHHh
Confidence 665543
No 219
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.32 E-value=2.2e-11 Score=127.42 Aligned_cols=183 Identities=15% Similarity=0.095 Sum_probs=111.4
Q ss_pred cccccceeEEEEEee-c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsaSiGQVhrA~l-~---G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.||+|++|.||+|.. + +..||+|..+.... ...+.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-----------------------------------------~~~~~ 40 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-----------------------------------------VQEQM 40 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC-----------------------------------------hHHHH
Confidence 589999999999987 2 46799997643211 01133
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc----CCCHHHHHHH--HHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----GVDRKRLGRY--AVESYL 454 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~----~~d~~~la~~--li~~~l 454 (773)
+|.+|...+.++. +++ +++++. ......++||||++|++|.++...... ..+...+... .+...+
T Consensus 41 ~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al 113 (269)
T cd05087 41 KFLEEAQPYRSLQ-----HSN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGL 113 (269)
T ss_pred HHHHHHHHHHhCC-----CCC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHH
Confidence 5666766665553 233 233332 234567999999999999886532111 1222222111 123346
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-------CCC
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-------VLV 527 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-------~~~ 527 (773)
..+|..|++|+|+||.||+++. ++.++++|||++........... .........++++++.... ...
T Consensus 114 ~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05087 114 LHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYKEDYYVT----PDQLWVPLRWIAPELVDEVHGNLLVVDQT 187 (269)
T ss_pred HHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccCcceeec----CCCcCCcccccCHhHhccccccccccCCC
Confidence 7889999999999999999986 78999999998865432211000 0001122345556655421 124
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
...|++++...+.+++
T Consensus 188 ~~~DiwslG~~l~el~ 203 (269)
T cd05087 188 KESNVWSLGVTIWELF 203 (269)
T ss_pred ccchhHHHHHHHHHHH
Confidence 5679999987766654
No 220
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.32 E-value=1.4e-11 Score=128.58 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=114.8
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.||+|++|.||+|++ .++ .||||......... .+ -
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~---------------------------------~~-------~ 44 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR---------------------------------SE-------M 44 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH---------------------------------HH-------H
Confidence 4689999999999998 343 69999874432111 00 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee--------ccCCCeEEEEeecCCCChhhhhhhhh-----cCCCHHHHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFW--------EYTTPQILTMEYVPGIKINRIQSLDE-----LGVDRKRLGRY 448 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--------e~st~~vLVMEyieG~~L~d~~~l~~-----~~~d~~~la~~ 448 (773)
-+|..|...+.++. +++ +++++. ......+++|||++|+++.++..... ...+...+...
T Consensus 45 ~~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (272)
T cd05075 45 EDFLSEAVCMKEFD-----HPN--VMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKF 117 (272)
T ss_pred HHHHHHHHHHHhCC-----CCC--cceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHH
Confidence 13455665555542 122 222221 11234689999999999987643221 11333333332
Q ss_pred H--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004115 449 A--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 526 (773)
Q Consensus 449 l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~ 526 (773)
+ +...+..+|..|++|+|+||.||+++. ++.++++|||++..+........ .......+.++.++...-+..
T Consensus 118 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~ 191 (272)
T cd05075 118 MTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCVADFGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLADRVY 191 (272)
T ss_pred HHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEECCCCcccccCcccceec----CCcccCCcccCCHHHccCCCc
Confidence 2 234478899999999999999999985 78999999999987754321000 011123345566666555556
Q ss_pred CCCCChHHHHHHHHHHH
Q 004115 527 VPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 527 ~~~~D~~~l~~~i~~~l 543 (773)
.+..|++++...+.+++
T Consensus 192 ~~~~Di~slG~il~el~ 208 (272)
T cd05075 192 TTKSDVWSFGVTMWEIA 208 (272)
T ss_pred ChHHHHHHHHHHHHHHH
Confidence 67789999987766654
No 221
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.32 E-value=1.9e-11 Score=130.44 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=113.7
Q ss_pred cccccccceeEEEEEee---------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l---------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
..+||.|++|.||+|+. ++..||+|+.++..... +
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------~-- 63 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK----------------------------------D-- 63 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH----------------------------------H--
Confidence 37899999999999974 24579999874322110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------------C
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------G 439 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------------~ 439 (773)
.-++..|...+..+. +++++ .+...+ ......+++|||++|++|.++...... .
T Consensus 64 -----~~~~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 133 (304)
T cd05101 64 -----LSDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133 (304)
T ss_pred -----HHHHHHHHHHHHhhc----cCCCchheeEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCccc
Confidence 012334444343331 22332 222222 334567999999999999887543211 1
Q ss_pred CCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004115 440 VDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 517 (773)
Q Consensus 440 ~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~ 517 (773)
.+...+.... +...+..+|.+|++|+|++|.||++++ ++.++++|||.+..+......... ......+.+++
T Consensus 134 ~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~----~~~~~~~~y~a 207 (304)
T cd05101 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDVNNIDYYKKT----TNGRLPVKWMA 207 (304)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC--CCcEEECCCccceecccccccccc----cCCCCCceeeC
Confidence 2222222222 334468899999999999999999985 789999999999877543221100 00111234556
Q ss_pred HHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 518 QAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 518 ~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
++...-+......|++++...+.+++
T Consensus 208 PE~~~~~~~~~~~Di~slG~~l~el~ 233 (304)
T cd05101 208 PEALFDRVYTHQSDVWSFGVLMWEIF 233 (304)
T ss_pred chhhccCCCCchhhHHHHHHHHHHHH
Confidence 66555455566789999887666543
No 222
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.32 E-value=1.4e-11 Score=130.14 Aligned_cols=119 Identities=13% Similarity=0.040 Sum_probs=76.7
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEecc-----CCCcEEEEe
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDV-----NGGRLIFYD 486 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~-----~~g~I~LlD 486 (773)
....++||||++|++|.++........+.......+ +...+..+|..|++|+|+||.||++++. ..+.+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 456799999999999988754333334444333332 2234788999999999999999999741 122489999
Q ss_pred ecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHH
Q 004115 487 FGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 487 FGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~~~ 542 (773)
||.......... ..++..+++++...- ....+..|++++...+.++
T Consensus 168 ~g~~~~~~~~~~----------~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 168 PGVSFTALSREE----------RVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred Cccccccccccc----------cccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 998754432211 012334555554432 3345678999988766554
No 223
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.31 E-value=9.6e-12 Score=130.91 Aligned_cols=185 Identities=18% Similarity=0.154 Sum_probs=114.3
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||+|++|.||+|.. +|+.||||..+......
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------------- 48 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH----------------------------------------- 48 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH-----------------------------------------
Confidence 6799999999999984 47899999874321100
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee---ccC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW---EYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESY 453 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~---e~s-t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~ 453 (773)
.-+|.+|.+.+.++. ++++ ++.+. ... ...++||||++|++|.++........+...+.... +...
T Consensus 49 -~~~~~~e~~~l~~l~-----h~~i--v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~a 120 (284)
T cd05081 49 -LRDFEREIEILKSLQ-----HDNI--VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKG 120 (284)
T ss_pred -HHHHHHHHHHHHhCC-----CCCe--eEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHH
Confidence 012344554444432 2332 22221 111 24689999999999998753322223433333322 2344
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|..|++|+|++|.||++++ ++.+++.|||++..+......... .........++.++...-+......|.+
T Consensus 121 L~~LH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 195 (284)
T cd05081 121 MEYLGSKRYVHRDLATRNILVES--ENRVKIGDFGLTKVLPQDKEYYKV---REPGESPIFWYAPESLTESKFSVASDVW 195 (284)
T ss_pred HHHHHHCCceeccCCHhhEEECC--CCeEEECCCcccccccCCCcceee---cCCCCCceEeeCHHHhccCCcChHHHHH
Confidence 78899999999999999999985 789999999999877543211000 0000111124455555445556667999
Q ss_pred HHHHHHHHHHH
Q 004115 534 AVRRTAQFFLN 544 (773)
Q Consensus 534 ~l~~~i~~~l~ 544 (773)
++...+.+++.
T Consensus 196 slG~~l~el~~ 206 (284)
T cd05081 196 SFGVVLYELFT 206 (284)
T ss_pred HHHHHHHHHhh
Confidence 99887776653
No 224
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.31 E-value=2.6e-11 Score=130.13 Aligned_cols=182 Identities=16% Similarity=0.167 Sum_probs=115.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|..||+|..+..... +.. -+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~-----------------------------------~~~------~~ 45 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP-----------------------------------AIR------NQ 45 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCH-----------------------------------HHH------HH
Confidence 6799999999999998 5889999987432211 111 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-C
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-H 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~-~ 460 (773)
+.+|++.+.++. +..-+.+...+. .....+++|||++|++|.++.... ..++...+.... +...+..+|. +
T Consensus 46 ~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 46 IIRELKVLHECN----SPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred HHHHHHHHHhCC----CCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 344554444432 211223333332 345679999999999999875322 222332222222 2233667886 6
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||+++.+....... ..+...+++++...-.......|.+++...+.
T Consensus 120 ~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~ 189 (308)
T cd06615 120 KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLV 189 (308)
T ss_pred CEEECCCChHHEEEec--CCcEEEccCCCccccccccccc--------CCCCcCccChhHhcCCCCCccchHHHHHHHHH
Confidence 9999999999999985 7899999999987764432111 12344455566655455566789999988776
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 190 ~l~~ 193 (308)
T cd06615 190 EMAI 193 (308)
T ss_pred HHHh
Confidence 6653
No 225
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.31 E-value=1.4e-11 Score=128.68 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||+|.+|.||+|++ +| ..||+|..+++.... .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~ 48 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK-----------------------------------------Q 48 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH-----------------------------------------H
Confidence 6799999999999987 23 379999875432111 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.-+|..|...+.++. +..-+.+...+ ......+++|||++|++|.++........+...+...+ +...+..+|
T Consensus 49 ~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 123 (267)
T cd05066 49 RRDFLSEASIMGQFD----HPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS 123 (267)
T ss_pred HHHHHHHHHHHHhCC----CCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 113445555444432 22222333333 23456799999999999998764332234444443332 234467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
+.|++|+|+||.||+++. ++.++++|||++..+........ .. .-......++.++...-+...+..|.+++...
T Consensus 124 ~~~i~h~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~-~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 198 (267)
T cd05066 124 DMGYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAY-TT--RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 198 (267)
T ss_pred HCCEeehhhchhcEEECC--CCeEEeCCCCcccccccccceee-ec--CCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence 999999999999999975 78999999999987754321110 00 00001123455555555556677899998876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 199 l~ell 203 (267)
T cd05066 199 MWEVM 203 (267)
T ss_pred HHHHh
Confidence 66544
No 226
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=9.7e-12 Score=141.98 Aligned_cols=183 Identities=19% Similarity=0.186 Sum_probs=117.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.||-|.|-.|++ +|+.+|||+.--...- + +-....+.+|+-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~--------------------s-------------~s~~~~IerEIv 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL--------------------S-------------SSQPAGIEREIV 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeecccccc--------------------c-------------cccccchhhhhH
Confidence 5699999999999999 7999999998322100 0 000011222221
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~--~l~qI~~~G 461 (773)
-|+.+ .+ ++|---.-+|+-.++.|||.||++|+.|-|+.- .+.++...+.+..+.+. .+..+|..+
T Consensus 65 ------iMkLi----~H-pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 65 ------IMKLI----EH-PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred ------HHHHh----cC-CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 12222 12 333222223455677899999999999999753 33444444444443332 366788999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRRTA 539 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~--~~~~~D~~~l~~~i 539 (773)
|.|||+||.|++++. .++|++.||||+..-.+. .+. --..+.+.+++++++. |. -....|+++=..++
T Consensus 133 icHRDLKpENlLLd~--~~nIKIADFGMAsLe~~g---klL----eTSCGSPHYA~PEIV~-G~pYdG~~sDVWSCGVIL 202 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDV--KNNIKIADFGMASLEVPG---KLL----ETSCGSPHYAAPEIVS-GRPYDGRPSDVWSCGVIL 202 (786)
T ss_pred ceeccCCchhhhhhc--ccCEeeeccceeecccCC---ccc----cccCCCcccCCchhhc-CCCCCCCccccchhHHHH
Confidence 999999999999986 566999999999854332 122 2246788898888874 32 22346888877665
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
..+|
T Consensus 203 fALL 206 (786)
T KOG0588|consen 203 FALL 206 (786)
T ss_pred HHHH
Confidence 5554
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.31 E-value=2.9e-11 Score=127.39 Aligned_cols=182 Identities=16% Similarity=0.157 Sum_probs=114.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|..|++|.......+. .-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~ 48 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE------------------------------------------LED 48 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH------------------------------------------HHH
Confidence 5699999999999999 57889999863221100 013
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
|.+|...+..+ +++++ .+...+ ......++||||++|.++.++........+...+...+ +...+..+|..
T Consensus 49 ~~~e~~~l~~l-----~h~~ii~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~ 122 (282)
T cd06643 49 YMVEIDILASC-----DHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN 122 (282)
T ss_pred HHHHHHHHHHC-----CCCCeeeEEEEE-eeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44455444443 22332 222222 23456799999999999987543222234444433333 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-----cCCCCCCCChHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-----MGVLVPTGDTTAV 535 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-----lG~~~~~~D~~~l 535 (773)
|++|+|++|.||+++. +++++++|||++.......... ....++..++.+++.. ........|++++
T Consensus 123 ~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 194 (282)
T cd06643 123 KIIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTIQRR------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194 (282)
T ss_pred CeeecCCCcccEEEcc--CCCEEEcccccccccccccccc------ccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence 9999999999999985 7899999999987664322110 0112445566666653 2223456799988
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+.+++
T Consensus 195 Gvil~el~ 202 (282)
T cd06643 195 GITLIEMA 202 (282)
T ss_pred HHHHHHHc
Confidence 87666553
No 228
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.31 E-value=2.8e-11 Score=124.66 Aligned_cols=126 Identities=23% Similarity=0.198 Sum_probs=80.5
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 492 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~ 492 (773)
...+++|||++|++|.++..... ..+...+...+ +-..+..+|..|++|+|++|.||++++ ++.++++|||++..
T Consensus 66 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~ 142 (265)
T cd05579 66 KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKV 142 (265)
T ss_pred cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchh
Confidence 45699999999999988653221 33433333222 223367889999999999999999986 88999999998876
Q ss_pred cChhhHHH--HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 493 ISPNIREG--LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 493 Ls~~~r~~--l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
........ ..........++..++.++...-+......|++++...+.+++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 143 GLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred cccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 43321100 0000001122344556666655555556789999887766554
No 229
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.31 E-value=4.8e-12 Score=132.43 Aligned_cols=186 Identities=20% Similarity=0.262 Sum_probs=120.3
Q ss_pred ccccccceeEEEEEeec------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+-||.|+||.||+|++. +..|+||+..+.....
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~----------------------------------------- 43 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE----------------------------------------- 43 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH-----------------------------------------
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc-----------------------------------------
Confidence 45999999999999996 6889999985432111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQ 456 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li~--~~l~q 456 (773)
..-+|.+|++.+.+++ ++++.-..-+........+||||+++++|.++.... ....+...+...+.+ ..+..
T Consensus 44 ~~~~~~~e~~~l~~l~-----h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~ 118 (259)
T PF07714_consen 44 EEEEFLNEIQILRKLR-----HPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSY 118 (259)
T ss_dssp HHHHHHHHHHHHHTHS-----BTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1234566666555552 233322222222345689999999999999976543 344555555544433 44788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
+|..+++|+|++|.||+++. ++.++|.|||+............ .........++.++...-+..+...|+++|.
T Consensus 119 Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG 192 (259)
T PF07714_consen 119 LHSNNIIHGNLSPSNILLDS--NGQVKLSDFGLSRPISEKSKYKN----DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFG 192 (259)
T ss_dssp HHHTTEEEST-SGGGEEEET--TTEEEEESTTTGEETTTSSSEEE----STTSESGGGGS-HHHHHHSEESHHHHHHHHH
T ss_pred cccccccccccccccccccc--ccccccccccccccccccccccc----ccccccccccccccccccccccccccccccc
Confidence 99999999999999999986 78999999999988732111000 0001223445566666666666778999998
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
-.+.+++
T Consensus 193 ~~l~ei~ 199 (259)
T PF07714_consen 193 MLLYEIL 199 (259)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 8776655
No 230
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.31 E-value=9.5e-12 Score=136.97 Aligned_cols=177 Identities=11% Similarity=0.051 Sum_probs=111.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|+||+|+. +++.||+|+...+..
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~---------------------------------------------- 104 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT---------------------------------------------- 104 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcccc----------------------------------------------
Confidence 36899999999999999 578999997532210
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
..|+..+.++. +..-+.+...+ ......++||||+.| .+.++........+...+...+ +...+..+|..
T Consensus 105 --~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 176 (357)
T PHA03209 105 --LIEAMLLQNVN----HPSVIRMKDTL-VSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ 176 (357)
T ss_pred --HHHHHHHHhCC----CCCCcChhheE-EeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11332222221 11112222222 223457899999976 5555433222334444333332 33447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||.||+++. ++.++|+|||++......... .-..+...++++++..-+......|++++...+.
T Consensus 177 ~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ 247 (357)
T PHA03209 177 RIIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAPAF-------LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLF 247 (357)
T ss_pred CeecCCCCHHHEEECC--CCCEEEecCccccccccCccc-------ccccccccccCCeecCCCCCCchhhHHHHHHHHH
Confidence 9999999999999985 789999999998753322110 0012455566666665555667789999988877
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 248 ell~ 251 (357)
T PHA03209 248 EMLA 251 (357)
T ss_pred HHHH
Confidence 7653
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.31 E-value=2.8e-11 Score=125.15 Aligned_cols=182 Identities=19% Similarity=0.162 Sum_probs=115.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+++|.|++|.||+|.. +++.+++|+......+. .. .
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~------~ 46 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD------------------------------------FE------I 46 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh------------------------------------HH------H
Confidence 6899999999999998 57899999884321110 01 2
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+..|...+.++. ++++ .+...+ ......+++|||++|.+|.++........+...+...+.+ ..+..+|..
T Consensus 47 ~~~e~~~l~~~~-----h~~i~~~~~~~-~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 47 IQQEISMLKECR-----HPNIVAYFGSY-LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred HHHHHHHHHhCC-----CCChhceEEEE-EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 233333333331 2222 222222 2345679999999999999875443234454444333322 336778999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCChHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGDTTAVRR 537 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG---~~~~~~D~~~l~~ 537 (773)
|++|+|++|.||+++. ++.+++.|||++..++...... ....+...++.+++.... ......|.+++..
T Consensus 121 ~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~ 192 (262)
T cd06613 121 GKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAKR------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGI 192 (262)
T ss_pred CceecCCChhhEEECC--CCCEEECccccchhhhhhhhcc------ccccCCccccCchhhcccccCCcCchhhhHHHHH
Confidence 9999999999999985 7899999999988775432110 001233345556655443 4555678888887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 193 ~l~~~~ 198 (262)
T cd06613 193 TAIELA 198 (262)
T ss_pred HHHHHH
Confidence 666554
No 232
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.31 E-value=1e-11 Score=132.45 Aligned_cols=183 Identities=13% Similarity=0.071 Sum_probs=109.6
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|+. +|+.||+|..+....... ..
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------------~~ 49 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA-----------------------------------------PC 49 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc-----------------------------------------hh
Confidence 36899999999999998 589999998743221110 00
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
++.+|.+.+.++. +++| .+..++ ......++||||++| ++.++........+...+...+ +...+..+|.
T Consensus 50 ~~~~E~~~l~~l~-----h~nI~~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~ 122 (301)
T cd07873 50 TAIREVSLLKDLK-----HANIVTLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR 122 (301)
T ss_pred HHHHHHHHHHhcC-----CCCcceEEEEE-ecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1233444444432 2322 222222 234557999999986 6655433222234444333332 2334788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~ 538 (773)
.|++|+|+||+||+++. ++.++++|||++..........-. ......++.++...- .......|++++...
T Consensus 123 ~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~------~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~ 194 (301)
T cd07873 123 RKVLHRDLKPQNLLINE--RGELKLADFGLARAKSIPTKTYSN------EVVTLWYRPPDILLGSTDYSTQIDMWGVGCI 194 (301)
T ss_pred CCeeCCCCCHHHEEECC--CCcEEECcCcchhccCCCCCcccc------cceeecccCcHHHhCCCCCccHHHHHHHHHH
Confidence 99999999999999985 789999999998765432211000 011233444444322 223445688888877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 195 l~el~ 199 (301)
T cd07873 195 FYEMS 199 (301)
T ss_pred HHHHH
Confidence 66654
No 233
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.31 E-value=3.2e-11 Score=123.14 Aligned_cols=187 Identities=17% Similarity=0.092 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||.|++|.||+|+. +|+.|++|+.+..... .+..+ .
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS----------------------------------EEELE------A 45 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc----------------------------------hHHHH------H
Confidence 6899999999999999 5899999987433211 00011 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
+.+|...+.++. ++++.-+.-..... ...+++|||++|.+|.++..... ..+...+...+. -..+..+|.
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~ 119 (260)
T cd06606 46 LEREIRILSSLQ-----HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS 119 (260)
T ss_pred HHHHHHHHHHcC-----CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 233444444432 23322221122223 56799999999999998754322 344444333322 233678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||++++ ++.++++|||....+....... ......++..++.++....+......|++++...+
T Consensus 120 ~~~~h~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (260)
T cd06606 120 NGIVHRDIKGANILVDS--DGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV 193 (260)
T ss_pred CCccccCCCHHHEEEcC--CCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH
Confidence 99999999999999986 7899999999999887654210 00112345566667766655566778999998877
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 194 ~~l~~ 198 (260)
T cd06606 194 IEMAT 198 (260)
T ss_pred HHHHh
Confidence 66553
No 234
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.31 E-value=2.5e-11 Score=113.49 Aligned_cols=134 Identities=25% Similarity=0.338 Sum_probs=96.0
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
++++.|+++.||+++.++..++||+.++... +.++.
T Consensus 4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--------------------------------------------~~~~~ 39 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREK--------------------------------------------GADRE 39 (155)
T ss_pred eecccccccceEEEEecCCeEEEEecCCCCc--------------------------------------------hhHHH
Confidence 5799999999999999778999998744321 12456
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh---C
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS---H 460 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~---~ 460 (773)
.|...+..+++. ...+|+++.... +..+++|||++|..+..+. ......+. ..+...+..+|. .
T Consensus 40 ~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~-----~~~~~~~~-~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 40 REVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEVS-----EEEKEDIA-EQLAELLAKLHQLPLL 108 (155)
T ss_pred HHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccCC-----HHHHHHHH-HHHHHHHHHHhCCCce
Confidence 666777777653 356777775433 3689999999998876540 01112222 223444666776 4
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
|++|+|+||+||++++ ++.++++|||.+...++.
T Consensus 109 ~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~~~~~ 142 (155)
T cd05120 109 VLCHGDLHPGNILVDD--GKILGIIDWEYAGYGPPA 142 (155)
T ss_pred EEEecCCCcceEEEEC--CcEEEEEecccccCCChH
Confidence 8999999999999985 689999999999876543
No 235
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.30 E-value=2.3e-11 Score=126.81 Aligned_cols=183 Identities=14% Similarity=0.084 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +++.||+|+...+... .-+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-------------------------------------------~~~ 48 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-------------------------------------------VEE 48 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-------------------------------------------HHH
Confidence 6799999999999998 5899999987422100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|.+.+.++. +..-+.+...+ ......+++|||++|++|.++.... ....+...+...+ +...+..+|..
T Consensus 49 ~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 123 (263)
T cd05052 49 FLKEAAVMKEIK----HPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 123 (263)
T ss_pred HHHHHHHHHhCC----CCChhheEEEE-cCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 344444444432 21112222222 2345679999999999999865322 1223433333222 22336788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+......... .......+++++....+...+..|++++...++
T Consensus 124 ~i~H~dlkp~nil~~~--~~~~kl~df~~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 196 (263)
T cd05052 124 NFIHRDLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAHA-----GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 196 (263)
T ss_pred CEeecccCcceEEEcC--CCcEEeCCCccccccccceeeccC-----CCCCccccCCHHHhccCCCCchhHHHHHHHHHH
Confidence 9999999999999985 889999999999877543211100 011123466666666666667789999988776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 197 el~ 199 (263)
T cd05052 197 EIA 199 (263)
T ss_pred HHH
Confidence 665
No 236
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.9e-12 Score=131.56 Aligned_cols=188 Identities=22% Similarity=0.222 Sum_probs=124.8
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
++|+. .|+|.|-||+||.|+. ++--||+||... .+ + +......+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfK---sq-------------i-----------------~~~~v~~q 68 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFK---SQ-------------I-----------------LKTQVEHQ 68 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeH---HH-------------H-----------------HHhcchhh
Confidence 46765 8999999999999999 578999999821 00 0 01123344
Q ss_pred HHHHHHHHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHH--HHHH
Q 004115 378 LYQEIDYTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRY--AVES 452 (773)
Q Consensus 378 l~~ElDf~~EA--~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~--li~~ 452 (773)
+.+|+....-. .|+-++...|.| +.+.||++||..++.+...... ....++...-+.. .+..
T Consensus 69 lrREiEIqs~L~hpnilrlY~~fhd-------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~ 135 (281)
T KOG0580|consen 69 LRREIEIQSHLRHPNILRLYGYFHD-------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLAN 135 (281)
T ss_pred hhheeEeecccCCccHHhhhhheec-------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHH
Confidence 45554332222 256666555543 5667999999998877654331 2222333322222 2344
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCh
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 532 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~ 532 (773)
.+..+|..+++|||+||.|+|+.. +|.+++.|||-.-.-+...|..++ +..+++.++|.+--.....+|.
T Consensus 136 Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfGwsV~~p~~kR~tlc--------gt~dyl~pEmv~~~~hd~~Vd~ 205 (281)
T KOG0580|consen 136 ALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSNKRKTLC--------GTLDYLPPEMVEGRGHDKFVDL 205 (281)
T ss_pred HHHHhccCCcccCCCCHHHhccCC--CCCeeccCCCceeecCCCCceeee--------cccccCCHhhcCCCCccchhhH
Confidence 577789999999999999999985 899999999988877666665554 4455566666655555566788
Q ss_pred HHHHHHHHHHHH
Q 004115 533 TAVRRTAQFFLN 544 (773)
Q Consensus 533 ~~l~~~i~~~l~ 544 (773)
+.++...++|+-
T Consensus 206 w~lgvl~yeflv 217 (281)
T KOG0580|consen 206 WSLGVLCYEFLV 217 (281)
T ss_pred HHHHHHHHHHHh
Confidence 888876666653
No 237
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.30 E-value=9.7e-12 Score=137.27 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=108.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+....... ... .-.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------------~~~-----------~~~ 45 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-----------------------------LVS-----------CKR 45 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-----------------------------hHH-----------HHH
Confidence 6799999999999997 6999999976321110 000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
+.+|+..+..+++ ..-+.+-.++.. .....+++|||+++ .+.+... ....++...+...+ +...+..+
T Consensus 46 ~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~L 119 (372)
T cd07853 46 VFRELKMLCFFKH----DNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYL 119 (372)
T ss_pred HHHHHHHHHhCCC----CCcCCHhheecCCCccccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3344444443321 111111112211 11256999999986 4554331 11223333333222 33447889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~ 536 (773)
|..|++|+|+||.||+++. ++.++|+|||++............ -......++++++..- .......|++++.
T Consensus 120 H~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~a~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (372)
T cd07853 120 HSAGILHRDIKPGNLLVNS--NCVLKICDFGLARVEEPDESKHMT-----QEVVTQYYRAPEILMGSRHYTSAVDIWSVG 192 (372)
T ss_pred HhCCeeCCCCChHHEEECC--CCCEEeccccceeecccCccccCC-----CCCcCCCcCCHHHHcCCCCCCcHHHHHhHH
Confidence 9999999999999999985 889999999999866433211110 0012334555555432 2235567999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+.+++.
T Consensus 193 ~il~el~~ 200 (372)
T cd07853 193 CIFAELLG 200 (372)
T ss_pred HHHHHHHc
Confidence 87776653
No 238
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.30 E-value=1.8e-11 Score=130.87 Aligned_cols=182 Identities=16% Similarity=0.148 Sum_probs=116.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|.||+|+. +|+.|+||...-.... . .-.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~----------------------------~--------------~~~ 62 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP----------------------------K--------------KEL 62 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc----------------------------h--------------HHH
Confidence 5799999999999997 6999999976211000 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~G 461 (773)
+.+|...+..+. ++++.-+.-+.......++||||++|++|.++... ...+...+..... ...+..+|..|
T Consensus 63 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 63 IINEILVMKELK-----NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred HHHHHHHHHhcC-----CCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 233444343332 23332222122234567999999999999886532 2344444443322 23467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.++++|||++..+.+..... ....+...++.++...-+......|.+++...+.+
T Consensus 136 i~H~dL~p~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ 207 (296)
T cd06655 136 VIHRDIKSDNVLLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (296)
T ss_pred cccCCCCHHHEEECC--CCCEEEccCccchhcccccccC------CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHH
Confidence 999999999999985 8899999999988776543211 01123445566666655555667899999877766
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 208 llt 210 (296)
T cd06655 208 MVE 210 (296)
T ss_pred HHh
Confidence 553
No 239
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.30 E-value=3.1e-11 Score=123.63 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.|++|+....... .+... .
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS----------------------------------EKERE------D 45 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC----------------------------------hHHHH------H
Confidence 5799999999999999 4899999987322110 01111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE--SYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---~~~d~~~la~~li~--~~l~qI~ 458 (773)
+..|.+.+..+. ++++.-+.-........+++|||++|.+|.+...... ...+...+...+.+ ..+..+|
T Consensus 46 ~~~e~~~l~~l~-----~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 46 ALNEVKILKKLN-----HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred HHHHHHHHHhcC-----CCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 233333333332 2322222212223467799999999999988654321 33444444444333 3367899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||++++ ++.++++|||++........ .. ....+++.++.++...-.......|++++...
T Consensus 121 ~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~--~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 192 (258)
T cd08215 121 SRKILHRDIKPQNIFLTS--NGLVKLGDFGISKVLSSTVD--LA----KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV 192 (258)
T ss_pred hCCEecccCChHHeEEcC--CCcEEECCccceeecccCcc--ee----cceeeeecccChhHhccCCCCccccHHHHHHH
Confidence 999999999999999985 78999999999988755430 11 11123444555555544555667899998876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 193 ~~~l~ 197 (258)
T cd08215 193 LYELC 197 (258)
T ss_pred HHHHH
Confidence 65544
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.30 E-value=2.4e-11 Score=127.49 Aligned_cols=183 Identities=17% Similarity=0.164 Sum_probs=112.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|+|++|+||+|++ +|+.||+|+........ . . +-.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------~-------~------~~~ 46 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP---------------------------V-------I------KKI 46 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc---------------------------c-------c------cHH
Confidence 5689999999999999 58999999873221000 0 0 012
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+..|+..+.++. ++++ .+...+ ......+++|||++|..+..+... ....+...+...+.+ ..+..+|..
T Consensus 47 ~~~e~~~l~~~~-----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~ 119 (286)
T cd07847 47 ALREIRMLKQLK-----HPNLVNLIEVF-RRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKH 119 (286)
T ss_pred HHHHHHHHHhCC-----CCCEeeeeeEE-eeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344544444432 2322 222222 334567999999999888776432 123444444333322 347788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|+||.||+++. ++.++++|||++..++......- ...+...+++++...- .......|.+++...+
T Consensus 120 ~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~ 191 (286)
T cd07847 120 NCIHRDVKPENILITK--QGQIKLCDFGFARILTGPGDDYT------DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVF 191 (286)
T ss_pred CceecCCChhhEEEcC--CCcEEECccccceecCCCccccc------CcccccccCCHHHHhCCCCcCchhhhHHHHHHH
Confidence 9999999999999985 78999999999998765432100 0011222334444332 2234567999988776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 192 ~~l~ 195 (286)
T cd07847 192 AELL 195 (286)
T ss_pred HHHH
Confidence 6654
No 241
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.30 E-value=3.4e-11 Score=124.25 Aligned_cols=100 Identities=29% Similarity=0.580 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHH-hcCCC--CccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhC
Q 004115 384 YTQEAANAELFAS-NFKDM--DYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~-~f~~~--~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~ 460 (773)
+.++..|+.+.+. .|... +.+..-+-.+.+++..+|+|||++|.+++++..+. ..++..+. ..++++|.+
T Consensus 82 ~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~-~~ikqlH~~ 154 (229)
T PF06176_consen 82 YSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------EDLAEKIV-EAIKQLHKH 154 (229)
T ss_pred HHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchhcC------HHHHHHHH-HHHHHHHHc
Confidence 4445555666544 23221 22334444557788889999999999999875432 12444444 568999999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
|++|+||||||+++. ++.++++||+..+..
T Consensus 155 G~~HGD~hpgNFlv~---~~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 155 GFYHGDPHPGNFLVS---NNGIRIIDTQGKRMS 184 (229)
T ss_pred CCccCCCCcCcEEEE---CCcEEEEECcccccc
Confidence 999999999999997 567999999988864
No 242
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.30 E-value=3.6e-11 Score=126.54 Aligned_cols=185 Identities=13% Similarity=0.149 Sum_probs=114.8
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|+.. ++.||||+.+..... ++.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~~~~-- 53 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG-----------------------------------PLRE-- 53 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH-----------------------------------HHHH--
Confidence 56899999999999872 478999987432111 0111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------------CCCH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------GVDR 442 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------------~~d~ 442 (773)
.|..|...+.. +.+ +++ .+...+ ......++++||+++..+.++...... ..+.
T Consensus 54 ----~~~~e~~~~~~----l~h-~~iv~~~~~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T cd05091 54 ----EFKHEAMMRSR----LQH-PNIVCLLGVV-TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP 123 (283)
T ss_pred ----HHHHHHHHHhc----CCC-CCcCeEEEEE-cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCH
Confidence 13333332222 222 322 222222 223457899999999999887532211 1222
Q ss_pred HHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004115 443 KRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 520 (773)
Q Consensus 443 ~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l 520 (773)
..+...+ +...+..+|..|++|+|+||.||++.+ ++.++++|||++..+......... ......+.+++++.
T Consensus 124 ~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~ 197 (283)
T cd05091 124 ADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD--KLNVKISDLGLFREVYAADYYKLM----GNSLLPIRWMSPEA 197 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccchhheEecC--CCceEecccccccccccchheeec----cCccCCccccCHHH
Confidence 2222222 223468899999999999999999985 789999999998877543211100 11112345677777
Q ss_pred HHcCCCCCCCChHHHHHHHHHHH
Q 004115 521 VQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 521 ~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
...+...+..|++++...+.+++
T Consensus 198 ~~~~~~~~~~Dv~slG~~l~el~ 220 (283)
T cd05091 198 IMYGKFSIDSDIWSYGVVLWEVF 220 (283)
T ss_pred HhcCCCCcchhHHHHHHHHHHHH
Confidence 76677777889999988777654
No 243
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.30 E-value=3.2e-11 Score=125.46 Aligned_cols=182 Identities=17% Similarity=0.173 Sum_probs=118.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.+ ++..|++|+.+++-.. .-+|
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-------------------------------------------VEAF 48 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH-------------------------------------------HHHH
Confidence 6899999999999998 6778999987543110 0134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.+|++.+.++. +..-+.+...+.+ ...+++|||++|++|.++.... ....+...+...+ +...+..+|..|
T Consensus 49 ~~e~~~l~~l~----~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 49 LAEANVMKTLQ----HDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred HHHHHHHHhcC----CCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55555444432 2222334344432 5679999999999998875322 1223333333222 233467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.+++.|||.+..+........ ........++.++....+......|.+++...+++
T Consensus 123 i~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05073 123 YIHRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAR-----EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 195 (260)
T ss_pred ccccccCcceEEEcC--CCcEEECCCcceeeccCCCcccc-----cCCcccccccCHhHhccCCcCccccchHHHHHHHH
Confidence 999999999999985 88999999999987754321100 00112234566666666666777899999877666
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 196 l~ 197 (260)
T cd05073 196 IV 197 (260)
T ss_pred HH
Confidence 55
No 244
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.30 E-value=2.5e-11 Score=129.13 Aligned_cols=185 Identities=19% Similarity=0.169 Sum_probs=115.4
Q ss_pred ccccccceeEEEEEee------------------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004115 306 EPIAAASLGQVHRARL------------------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 367 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l------------------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~ 367 (773)
+.||.|++|.||+|.. ++..||||+.+......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~----------------------------- 61 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN----------------------------- 61 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH-----------------------------
Confidence 5799999999999853 13468899875432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcC------
Q 004115 368 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG------ 439 (773)
Q Consensus 368 ~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~------ 439 (773)
..-+|.+|++.+.++.+ +++ ++++. ......+++|||++|++|.++.......
T Consensus 62 ------------~~~~~~~E~~~l~~l~~-----~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05095 62 ------------ARNDFLKEIKIMSRLKD-----PNI--IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKA 122 (296)
T ss_pred ------------HHHHHHHHHHHHHhCCC-----CCc--ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccc
Confidence 01245566655554432 332 23322 3345679999999999998865322111
Q ss_pred ----CCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCH
Q 004115 440 ----VDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDA 513 (773)
Q Consensus 440 ----~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~ 513 (773)
.+...+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||++..+......... +......
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~ 196 (296)
T cd05095 123 DVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSGDYYRIQ----GRAVLPI 196 (296)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC--CCCEEeccCcccccccCCcceecc----CcCcCcc
Confidence 1222233322 233478899999999999999999985 789999999998876433211000 0001123
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 514 DKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 514 ~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
.++.+.....+......|.+++...+++++.
T Consensus 197 ~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 197 RWMSWESILLGKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred ccCCHHHHhcCCccchhhhhHHHHHHHHHHH
Confidence 3445555555666778899999988777664
No 245
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.30 E-value=3.7e-11 Score=125.43 Aligned_cols=183 Identities=16% Similarity=0.105 Sum_probs=107.2
Q ss_pred cccccceeEEEEEee-c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsaSiGQVhrA~l-~---G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.||.|+||+||+|+. + ...|++|..+...... .+.
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------------~~~ 40 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD-----------------------------------------EQL 40 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChH-----------------------------------------HHH
Confidence 489999999999986 3 3578888653221100 112
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcC----CCHHHHHHHH--HHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG----VDRKRLGRYA--VESYL 454 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~----~d~~~la~~l--i~~~l 454 (773)
.|.+|+..+..+ ++++| .+.+. ......++||||++|++|.++....... .+...+.... +...+
T Consensus 41 ~~~~e~~~~~~l-----~h~ni--i~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l 113 (269)
T cd05042 41 LFLQEVQPYREL-----NHPNV--LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGL 113 (269)
T ss_pred HHHHHHHHHHhC-----CCCCc--ceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHH
Confidence 345555444333 22332 22222 2345679999999999999875322111 1222222221 23446
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-------CCCC
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-------GVLV 527 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-------G~~~ 527 (773)
..+|+.|++|+|+||.||+++. ++.++++|||++............ ........++++++... ....
T Consensus 114 ~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05042 114 LWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYPEDYYITK----DCHAVPLRWLAPELVEIRGQDLLPKDQT 187 (269)
T ss_pred HHHHhcCEecccccHhheEecC--CCcEEEeccccccccccchheecc----CCCCCcccccCHHHHhhccccccccccc
Confidence 7899999999999999999986 889999999988654332110000 00011223455555432 1234
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
...|++++.-.+.+++
T Consensus 188 ~~~DiwslG~~l~el~ 203 (269)
T cd05042 188 KKSNIWSLGVTMWELF 203 (269)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 4678888887666554
No 246
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.30 E-value=1.5e-11 Score=134.59 Aligned_cols=188 Identities=18% Similarity=0.240 Sum_probs=114.3
Q ss_pred hhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 299 VFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 299 iF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
+...|. .+.||.|++|.||+|+. +|+.||||+..-..... .
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~------- 57 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-----------------------------T------- 57 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-----------------------------h-------
Confidence 334454 37899999999999998 69999999762111000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH-
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA- 449 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l- 449 (773)
....+.+|...+.++.+ ..-+.+..++. +.....++||||++| .+.+.... ..+...+...+
T Consensus 58 ----~~~~~~~E~~~l~~l~h----~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ 125 (353)
T cd07850 58 ----HAKRAYRELVLMKLVNH----KNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLY 125 (353)
T ss_pred ----HHHHHHHHHHHHHhcCC----CCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHH
Confidence 00112334444444321 11111222111 111246999999987 55553321 13433333222
Q ss_pred -HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004115 450 -VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 528 (773)
Q Consensus 450 -i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~ 528 (773)
+...+..+|..|++|+|++|+||+++. ++.++|+|||++..+....... .......++++++........
T Consensus 126 ql~~aL~~LH~~gi~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~ 196 (353)
T cd07850 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMMT-------PYVVTRYYRAPEVILGMGYKE 196 (353)
T ss_pred HHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCccceeCCCCCCCC-------CCcccccccCHHHHhCCCCCC
Confidence 334578899999999999999999985 7899999999998776532210 011233455666665555667
Q ss_pred CCChHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFL 543 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l 543 (773)
..|++++...+.+++
T Consensus 197 ~~DvwslG~~l~~l~ 211 (353)
T cd07850 197 NVDIWSVGCIMGEMI 211 (353)
T ss_pred chhhHhHHHHHHHHH
Confidence 789999988777665
No 247
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.30 E-value=2.2e-11 Score=125.21 Aligned_cols=158 Identities=18% Similarity=0.234 Sum_probs=105.1
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+.+++++||+||.+...|++++.+.. ... | -| ..... .. -|.
T Consensus 8 ~~l~~~~f~~v~~~~~~~~k~~~~~l----~~~-------------------~-------~~---~~~~~----~~-l~~ 49 (218)
T PRK12274 8 EPLKSDTFGRILLVRGGERKFVRRDL----SAA-------------------P-------WW---LRGVA----WW-LAR 49 (218)
T ss_pred eeecCCCcceEEEeecCCceeeeccc----ccc-------------------h-------hh---hhhHH----HH-HHH
Confidence 67999999999977777887776643 100 0 00 00010 11 356
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 465 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHa 465 (773)
+|++.+.++.+ ...+|.++. + ...+++|||++|.+|.+.... ....+... +...++++|..|++|+
T Consensus 50 rE~~iL~~L~~------~~~vP~ll~-~-~~~~lvmeyI~G~~L~~~~~~-----~~~~~~~q-i~~~L~~lH~~GIvHr 115 (218)
T PRK12274 50 REALALRQLDG------LPRTPRLLH-W-DGRHLDRSYLAGAAMYQRPPR-----GDLAYFRA-ARRLLQQLHRCGVAHN 115 (218)
T ss_pred HHHHHHHhcCC------CCCCCEEEE-E-cCEEEEEeeecCccHHhhhhh-----hhHHHHHH-HHHHHHHHHHCcCccC
Confidence 78877776643 245788875 2 457999999999998654211 11222222 3446888999999999
Q ss_pred CC-CCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004115 466 DP-HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 466 Dp-HPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~ 522 (773)
|+ ||+||+++. +|.++++|||++...++..+ . ..-+..+|...+...+..
T Consensus 116 DL~kp~NILv~~--~g~i~LIDFG~A~~~~~~~~--~---~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 116 DLAKEANWLVQE--DGSPAVIDFQLAVRGNPRAR--W---MRLLAREDLRHLLKHKRM 166 (218)
T ss_pred CCCCcceEEEcC--CCCEEEEECCCceecCCcch--H---HHHHHHHHHHHHHHHHHh
Confidence 99 799999985 78999999999997765443 1 112235788888887655
No 248
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.30 E-value=2.6e-11 Score=126.99 Aligned_cols=182 Identities=19% Similarity=0.140 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|+|++|.||+|+. +|+.||+|+...... .. ..-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------------------------~~-----------~~~~ 45 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA------------------------------ED-----------EIED 45 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeecccc------------------------------ch-----------HHHH
Confidence 5799999999999998 689999998731110 00 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
+.+|.+.+..+. ++++.-+..+.......++||||++|.+|.++.... ..+...+...+.+ ..+..+|..|
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 46 IQQEIQFLSQCR-----SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred HHHHHHHHHHcC-----CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 344444444432 233322222223346679999999999998875432 3344443333322 3366789999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||++++ ++.++++|||++..++....... ...+...++.++...-+......|++++...+.+
T Consensus 119 i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~ 190 (274)
T cd06609 119 KIHRDIKAANILLSE--EGDVKLADFGVSGQLTSTMSKRN------TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE 190 (274)
T ss_pred cccCCCCHHHEEECC--CCCEEEcccccceeecccccccc------cccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 88999999999988865421110 0112334566666655556677899999887766
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 191 l~ 192 (274)
T cd06609 191 LA 192 (274)
T ss_pred HH
Confidence 55
No 249
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.30 E-value=1.9e-11 Score=133.50 Aligned_cols=146 Identities=21% Similarity=0.284 Sum_probs=99.4
Q ss_pred hhccCc-ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004115 300 FERFDV-EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 376 (773)
Q Consensus 300 F~~fd~-~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 376 (773)
+..|.. +-+|.|.+|.||.|.++ +...|+||+-.. .|.. - +.+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~----------~l~~----r------------------kKl-- 121 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKE----------SLAS----R------------------KKL-- 121 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHH----------HHhh----h------------------hHH--
Confidence 344543 67999999999999994 589999998211 1000 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCe--EEEEeecCCCChhhhhhhhhcC---CCHHHHHHHHHH
Q 004115 377 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQ--ILTMEYVPGIKINRIQSLDELG---VDRKRLGRYAVE 451 (773)
Q Consensus 377 ~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~--vLVMEyieG~~L~d~~~l~~~~---~d~~~la~~li~ 451 (773)
.....|..-+ ....+-.+|..|..+.++. +||||||+|+.|..+.+-+..+ .+..+....-+-
T Consensus 122 -----~Ra~tE~eIL-------~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl 189 (459)
T KOG0610|consen 122 -----KRAQTEREIL-------SLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVL 189 (459)
T ss_pred -----HHHHHHHHHH-------HhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHH
Confidence 0011122222 2223456899998887765 8999999999998875433322 223333334455
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
..|+++|-.||+.||+||.||||.+ +|.|.|.||-+..+.
T Consensus 190 ~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 190 LALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHhhceeeccCCcceeEEec--CCcEEeeeccccccC
Confidence 6689999999999999999999997 999999999887654
No 250
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.30 E-value=1.6e-11 Score=128.35 Aligned_cols=186 Identities=17% Similarity=0.179 Sum_probs=116.4
Q ss_pred ccccccceeEEEEEeec------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||.|++|.||+|+++ |+.||||+.++.... .
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-----------------------------------------~ 48 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-----------------------------------------Q 48 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-----------------------------------------H
Confidence 67999999999999962 689999988543221 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--cc--CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESY 453 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~--st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~ 453 (773)
.+-+|.+|.+.+.++. +++ +++.+. .. ....+++|||++|+++.++........+...+...+ +...
T Consensus 49 ~~~~~~~ei~~l~~l~-----~~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~a 121 (284)
T cd05038 49 HRSDFEREIEILRTLD-----HEN--IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKG 121 (284)
T ss_pred HHHHHHHHHHHHHhCC-----CCC--hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHH
Confidence 1123445554444332 122 223221 22 234699999999999998754333234444433332 2234
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|..|++|+|++|.||+++. ++.+++.|||++..+.......... ........++.++....+......|.+
T Consensus 122 L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~~Pe~~~~~~~~~~~Di~ 196 (284)
T cd05038 122 MDYLGSQRYIHRDLAARNILVES--EDLVKISDFGLAKVLPEDKDYYYVK---EPGESPIFWYAPECLRTSKFSSASDVW 196 (284)
T ss_pred HHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccccccccccCCcceecc---CCCCCcccccCcHHHccCCCCcccchH
Confidence 67889999999999999999985 7999999999999886432110000 001111223444544445556678999
Q ss_pred HHHHHHHHHHH
Q 004115 534 AVRRTAQFFLN 544 (773)
Q Consensus 534 ~l~~~i~~~l~ 544 (773)
++...+.+++.
T Consensus 197 slG~~l~el~t 207 (284)
T cd05038 197 SFGVTLYELFT 207 (284)
T ss_pred HHhhhhheeec
Confidence 99877766653
No 251
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.30 E-value=3e-11 Score=126.51 Aligned_cols=118 Identities=14% Similarity=0.048 Sum_probs=78.0
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCC-------cEEE
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGG-------RLIF 484 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g-------~I~L 484 (773)
....+++|||++|+++..+........+...+...+ +...+..+|..|++|+|++|.||++.. ++ .+++
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~~~~~~~~~l 153 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR--EGIDGECGPFIKL 153 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec--CCccCCCCceeEe
Confidence 356799999999999987654332334444443332 233478899999999999999999974 33 3899
Q ss_pred EeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHHHHH
Q 004115 485 YDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 485 lDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~~~i~~~l 543 (773)
.|||....+..... ..++..+++++... .+......|++++...+++++
T Consensus 154 ~d~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~ 203 (262)
T cd05077 154 SDPGIPITVLSRQE----------CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEIC 203 (262)
T ss_pred CCCCCCccccCccc----------ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHH
Confidence 99998866532210 11233455666554 334455679999887766554
No 252
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.29 E-value=8.7e-12 Score=139.09 Aligned_cols=178 Identities=11% Similarity=0.094 Sum_probs=113.5
Q ss_pred ccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
..||.|++|.||+|.. .++.||||+...+.
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~---------------------------------------------- 131 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK---------------------------------------------- 131 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc----------------------------------------------
Confidence 6799999999999986 35789999763210
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
++.+|.+.+.++. ++++ .+-..+ ......+++||++.| .+.++.. ....+....+...+ +...+..+|
T Consensus 132 -~~~~E~~il~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH 202 (392)
T PHA03207 132 -TPGREIDILKTIS-----HRAIINLIHAY-RWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLH 202 (392)
T ss_pred -cHHHHHHHHHhcC-----CCCccceeeeE-eeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0123444444332 2222 221222 334567999999976 4544431 12223333333322 223478899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|+||.||+++. ++.++|+|||++..+.......-. ....+...++++++...+......|++++...
T Consensus 203 ~~givHrDlkp~Nill~~--~~~~~l~DfG~a~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi 276 (392)
T PHA03207 203 GRGIIHRDVKTENIFLDE--PENAVLGDFGAACKLDAHPDTPQC----YGWSGTLETNSPELLALDPYCAKTDIWSAGLV 276 (392)
T ss_pred HCCccccCCCHHHEEEcC--CCCEEEccCccccccCcccccccc----cccccccCccCHhHhcCCCCCchhhHHHHHHH
Confidence 999999999999999985 789999999999876543211100 01234566777777776666777899999988
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+++++.
T Consensus 277 l~el~~ 282 (392)
T PHA03207 277 LFEMSV 282 (392)
T ss_pred HHHHHH
Confidence 777653
No 253
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.29 E-value=2.1e-11 Score=130.68 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=117.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||...+..... .. ..-.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~ 47 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---------------------------------RN------KVKR 47 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch---------------------------------HH------HHHH
Confidence 6799999999999999 58999999885431110 00 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~ 458 (773)
+..|.+.+.++. +++ +++++. +.....+++|||++|.+|.++..... ..++.......+ +...+..+|
T Consensus 48 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 48 VLTEQEILATLD-----HPF--LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred HHHHHHHHHhCC-----CCC--chhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 344555454443 222 333333 33456799999999999998754221 223333332222 333467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHH----------------HHHH-------HhhcCHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE----------------AFYG-------IYEKDADK 515 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~----------------l~~a-------l~~~D~~~ 515 (773)
..|++|+|+||.||+++. ++.+++.|||++...+......... .... -..++..+
T Consensus 121 ~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y 198 (316)
T cd05574 121 LLGIVYRDLKPENILLHE--SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY 198 (316)
T ss_pred HCCeeccCCChHHeEEcC--CCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCC
Confidence 999999999999999986 7899999999988765432111000 0000 00123345
Q ss_pred HHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 516 VLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 516 i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+.+++..-+......|++++...+++++
T Consensus 199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~ 226 (316)
T cd05574 199 IAPEVISGDGHGSAVDWWTLGILLYEML 226 (316)
T ss_pred cCHHHHcCCCCCchHHHHHHHHHHHHHh
Confidence 5666655555566779999887776654
No 254
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.29 E-value=2.6e-11 Score=128.05 Aligned_cols=181 Identities=19% Similarity=0.233 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +|+.||+|+........ ... +
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 49 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSS-----------------------------------VRK------Q 49 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcch-----------------------------------HHH------H
Confidence 5799999999999998 58999999874322111 111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh-C
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS-H 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~-~ 460 (773)
+.+|.+.+..+ +++++.-..-+.......+|||||++|++|.++.... .......+.... +...+..+|. +
T Consensus 50 ~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 50 ILRELQIMHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred HHHHHHHHHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444333 2233333333333446779999999999998864321 122322222222 2233566775 7
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+...... ...+...++.++....+......|.+++...+.
T Consensus 124 ~i~H~dl~p~nil~~~--~~~~~l~d~gl~~~~~~~~~~--------~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 193 (284)
T cd06620 124 RIMHRDIKPSNILVNS--RGQIKLCDFGVSGELINSIAD--------TFVGTSTYMSPERIQGGKYTVKSDVWSLGISII 193 (284)
T ss_pred CeeccCCCHHHEEECC--CCcEEEccCCcccchhhhccC--------ccccCcccCCHHHHccCCCCccchHHHHHHHHH
Confidence 9999999999999985 789999999998765332211 112344555566655555566789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 194 ~l~ 196 (284)
T cd06620 194 ELA 196 (284)
T ss_pred HHH
Confidence 655
No 255
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.29 E-value=3.8e-11 Score=126.28 Aligned_cols=186 Identities=16% Similarity=0.108 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|.+. +..|++|........
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~----------------------------------------- 50 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE----------------------------------------- 50 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH-----------------------------------------
Confidence 68999999999999983 367888866322110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc------CCCHHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL------GVDRKRLGRYAV 450 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~------~~d~~~la~~li 450 (773)
..+.+|.+|...+.++. ++++ .+++. ......+++|||++|++|.++...... ..+...+...+.
T Consensus 51 ~~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05036 51 QDESDFLMEALIMSKFN-----HQNI--VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123 (277)
T ss_pred HHHHHHHHHHHHHHhCC-----CCCE--eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 11345666766555543 2222 22332 233457999999999999986533221 233333333332
Q ss_pred --HHHHHHHHhCCCccCCCCCCceEEeccC-CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 451 --ESYLEQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 451 --~~~l~qI~~~GffHaDpHPGNILV~~~~-~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
...+..+|..|++|+|++|.||+++... +..++++|||++..+....-... .+.......+++++...-+..+
T Consensus 124 qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 199 (277)
T cd05036 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK----GGRAMLPIKWMPPEAFLDGIFT 199 (277)
T ss_pred HHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceec----CCCCCccHhhCCHHHHhcCCcC
Confidence 2346788999999999999999997521 23689999999987743211000 0000112345666666666677
Q ss_pred CCCChHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFL 543 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l 543 (773)
...|++++...+.+++
T Consensus 200 ~~~DiwslG~il~el~ 215 (277)
T cd05036 200 SKTDVWSFGVLLWEIF 215 (277)
T ss_pred chhHHHHHHHHHHHHH
Confidence 7889999988776654
No 256
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.29 E-value=1.6e-11 Score=128.77 Aligned_cols=184 Identities=19% Similarity=0.174 Sum_probs=115.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.|+||+........ .. +-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~----------------------------------~~------~~~ 45 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG----------------------------------GI------PNQ 45 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc----------------------------------hh------hHH
Confidence 5699999999999998 68999999874321100 00 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+..|...+.++. ++++ .+...+ ......++||||+ |.+|.++........+...+...+ +...+..+|..
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~-~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 118 (286)
T cd07832 46 ALREIKALQACQ-----HPYVVKLLDVF-PHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN 118 (286)
T ss_pred HHHHHHHHHhCC-----CCCCcceeeEE-ecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 444544444432 2222 222222 2355679999999 999988654333334544443332 23446788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|+||.||++++ ++.++++|||++..+.......+. ...++..++++++... ....+..|++++...+
T Consensus 119 ~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 191 (286)
T cd07832 119 GIMHRDLKPANLLISA--DGVLKIADFGLARLFSEEEPRLYS-----HQVATRWYRAPELLYGARKYDPGVDLWAVGCIF 191 (286)
T ss_pred CeecCCcCHHHEEEcC--CCcEEEeeeeecccccCCCCCccc-----cccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence 9999999999999986 789999999999887654321111 1123334455544332 2235567888888776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 192 ~~l~ 195 (286)
T cd07832 192 AELL 195 (286)
T ss_pred HHHH
Confidence 6654
No 257
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.29 E-value=3.2e-11 Score=129.05 Aligned_cols=187 Identities=14% Similarity=0.101 Sum_probs=114.7
Q ss_pred cccccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
.++||+|++|.||+|... +..||+|+.++...+.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------- 65 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK------------------------------------- 65 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH-------------------------------------
Confidence 368999999999999862 2469999886542111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cC
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LG 439 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~ 439 (773)
..-++..|...+.++. .++++ .+...+ ......+++|||++|++|.++..... ..
T Consensus 66 ----~~~~~~~e~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 66 ----DLSDLISEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ----HHHHHHHHHHHHHHhc----CCCCEeeEEEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 0012334444444432 12332 222222 23456799999999999998754321 11
Q ss_pred CCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004115 440 VDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 517 (773)
Q Consensus 440 ~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~ 517 (773)
.+...+...+.+ ..+..+|..|++|+|+||.||++++ ++.++++|||.+..+........ . ........+++
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~--~--~~~~~~~~y~a 210 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKK--T--TNGRLPVKWMA 210 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC--CCcEEECCCcccccccccchhhc--c--ccCCCccceeC
Confidence 233333333322 3478899999999999999999986 78999999999876643211100 0 00011134555
Q ss_pred HHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 518 QAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 518 ~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
++...-+......|.+++...+++++
T Consensus 211 PE~~~~~~~~~~~DvwslG~~l~el~ 236 (307)
T cd05098 211 PEALFDRIYTHQSDVWSFGVLLWEIF 236 (307)
T ss_pred hHHhccCCCCcHHHHHHHHHHHHHHH
Confidence 66555555666789999887666554
No 258
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.29 E-value=5.1e-11 Score=124.85 Aligned_cols=182 Identities=16% Similarity=0.170 Sum_probs=111.3
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.||.|++|.||+|++ +|. .|++|..+...... ..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------------~~ 39 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-----------------------------------------DH 39 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHH-----------------------------------------HH
Confidence 3689999999999998 344 46778663211100 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKR 444 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d~~~ 444 (773)
-+|..|...+.++. +++++ .+++. ......+++|||++|++|.++..... .......
T Consensus 40 ~~~~~E~~~l~~l~----~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (270)
T cd05047 40 RDFAGELEVLCKLG----HHPNI--INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 113 (270)
T ss_pred HHHHHHHHHHHhhc----cCCCe--eeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHH
Confidence 13455655555543 22332 22222 23345799999999999988653211 0122233
Q ss_pred HHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004115 445 LGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 445 la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~ 522 (773)
+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||++.......... .......+++++...
T Consensus 114 ~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~dfgl~~~~~~~~~~~-------~~~~~~~y~apE~~~ 184 (270)
T cd05047 114 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKT-------MGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEECCCCCccccchhhhcc-------CCCCccccCChHHHc
Confidence 33222 224478899999999999999999985 7899999999876432211110 001123355566555
Q ss_pred cCCCCCCCChHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l 543 (773)
........|.+++...+.+++
T Consensus 185 ~~~~~~~~Di~slG~il~el~ 205 (270)
T cd05047 185 YSVYTTNSDVWSYGVLLWEIV 205 (270)
T ss_pred cCCCCchhhHHHHHHHHHHHH
Confidence 555666789999987766654
No 259
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.29 E-value=5.1e-11 Score=125.76 Aligned_cols=182 Identities=16% Similarity=0.164 Sum_probs=118.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+++++|++|+||+|.+ +++.|++|+.+.... .+-.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------------------------------------------~~~~ 61 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-------------------------------------------NKEL 61 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-------------------------------------------hHHH
Confidence 6899999999999999 489999998843221 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~ 460 (773)
+..|...+.++. ++++ .+...+ ......+++|||++|.+|.++........+...+...+.+ ..+..+|..
T Consensus 62 ~~~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 135 (286)
T cd06614 62 IINEILIMKDCK-----HPNIVDYYDSY-LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ 135 (286)
T ss_pred HHHHHHHHHHCC-----CCCeeEEEEEE-EECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 333433333332 2222 222222 3346789999999999999976543223444444333322 346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||+++. ++.++++|||....+....... ....++..++.++...-+......|++++...+.
T Consensus 136 gi~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~ 207 (286)
T cd06614 136 NVIHRDIKSDNILLSK--DGSVKLADFGFAAQLTKEKSKR------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCI 207 (286)
T ss_pred CeeeCCCChhhEEEcC--CCCEEECccchhhhhccchhhh------ccccCCcccCCHhHhcCCCCCCccccHHHHHHHH
Confidence 9999999999999985 7899999999987765432211 1112334455555554444566789999998877
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 208 ~l~~ 211 (286)
T cd06614 208 EMAE 211 (286)
T ss_pred HHHh
Confidence 6653
No 260
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.29 E-value=4.2e-11 Score=126.98 Aligned_cols=183 Identities=14% Similarity=0.119 Sum_probs=117.7
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|.. +|+.|++|+.+-. .. . .+-
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~-----------------------------~-----------~~~ 61 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQ-----------------------------Q-----------RRE 61 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEecc--ch-----------------------------h-----------HHH
Confidence 36899999999999997 6899999975200 00 0 000
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
.+.+|..-+..+ +++++.-+.-+.......+++|||++|.+|.++... ...+...+...+. ...+..+|..
T Consensus 62 ~~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~ 134 (285)
T cd06648 62 LLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ 134 (285)
T ss_pred HHHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 123343333333 233333333333345678999999999999986533 2344444333322 2336788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|.||++++ ++.++++|||++..+........ ...+...++.++...-+......|++++...+.
T Consensus 135 ~i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ 206 (285)
T cd06648 135 GVIHRDIKSDSILLTS--DGRVKLSDFGFCAQVSKEVPRRK------SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 206 (285)
T ss_pred CeecCCCChhhEEEcC--CCcEEEcccccchhhccCCcccc------cccCCccccCHHHhcCCCCCCcccHHHHHHHHH
Confidence 9999999999999985 88999999998876644321110 112344566666665555566789999988777
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 207 ell~ 210 (285)
T cd06648 207 EMVD 210 (285)
T ss_pred HHHh
Confidence 6653
No 261
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.29 E-value=5.6e-11 Score=125.84 Aligned_cols=183 Identities=20% Similarity=0.226 Sum_probs=117.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.+ +++.||+|+..+.... ..+-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------------~~~~~ 45 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-----------------------------------------DLQKQ 45 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch-----------------------------------------HHHHH
Confidence 6899999999999999 5899999987432110 01223
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec-cCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWE-YTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e-~st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~l--i~~~l~q 456 (773)
+.+|.+.+.++. +++| .+...+.. .....++||||++|.+|.++... . ........+...+ +...+..
T Consensus 46 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~ 120 (287)
T cd06621 46 ILRELEINKSCK-----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120 (287)
T ss_pred HHHHHHHHHhCC-----CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 455655555442 2332 22222222 12356999999999999886431 1 1122333322222 2234677
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
+|..|++|+|++|+||+++. ++.++++|||++..+....... ...+..++.++....+..+...|++++.
T Consensus 121 lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~y~~pE~~~~~~~~~~~Dv~slG 190 (287)
T cd06621 121 LHSRKIIHRDIKPSNILLTR--KGQVKLCDFGVSGELVNSLAGT--------FTGTSFYMAPERIQGKPYSITSDVWSLG 190 (287)
T ss_pred HHHCCcccCCCCHHHEEEec--CCeEEEeecccccccccccccc--------ccCCccccCHHHhcCCCCCchhhHHHHH
Confidence 89999999999999999986 7889999999987765432211 1233445556655555556678999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+++++.
T Consensus 191 ~il~~l~~ 198 (287)
T cd06621 191 LTLLEVAQ 198 (287)
T ss_pred HHHHHHHh
Confidence 87776653
No 262
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.28 E-value=3.8e-11 Score=127.89 Aligned_cols=183 Identities=15% Similarity=0.154 Sum_probs=111.7
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.||.|++|+||+|++ +|. .|++|..+...... ..
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~ 46 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEN-----------------------------------------DH 46 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHH-----------------------------------------HH
Confidence 6799999999999998 343 47888653211000 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRL 445 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d~~~l 445 (773)
-+|.+|...+.++. +++++. +... .......+++|||+++++|.++..... .......+
T Consensus 47 ~~~~~E~~~l~~l~----~hp~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 121 (297)
T cd05089 47 RDFAGELEVLCKLG----HHPNIINLLGA-CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121 (297)
T ss_pred HHHHHHHHHHHhhc----CCCchhheEEE-EccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHH
Confidence 13556666665553 223321 2222 223345799999999999988653211 01222333
Q ss_pred HHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004115 446 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 523 (773)
Q Consensus 446 a~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l 523 (773)
...+ +...+..+|..|++|+|+||.||++++ ++.++++|||+............ ......++.++....
T Consensus 122 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~-------~~~~~~y~aPE~~~~ 192 (297)
T cd05089 122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGE--NLASKIADFGLSRGEEVYVKKTM-------GRLPVRWMAIESLNY 192 (297)
T ss_pred HHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--CCeEEECCcCCCccccceeccCC-------CCcCccccCchhhcc
Confidence 3322 234478899999999999999999985 78999999998864322111100 011123455555555
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004115 524 GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 524 G~~~~~~D~~~l~~~i~~~l 543 (773)
+......|++++...+++++
T Consensus 193 ~~~~~~~DvwSlG~il~el~ 212 (297)
T cd05089 193 SVYTTKSDVWSFGVLLWEIV 212 (297)
T ss_pred CCCCchhhHHHHHHHHHHHH
Confidence 55566789999988776654
No 263
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.28 E-value=6.1e-11 Score=122.52 Aligned_cols=184 Identities=16% Similarity=0.080 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||.++. +|+.|++|.....-. +. ...-+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-----------------------------~~-----------~~~~~ 45 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-----------------------------SE-----------KERRD 45 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeeccc-----------------------------ch-----------hHHHH
Confidence 6799999999999888 689999997621100 00 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
+.+|...++++. +++ +.+...+ ......+++|||++|++|.++.... ....+...+...+ +...+..+|.
T Consensus 46 ~~~e~~~l~~~~-----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 119 (256)
T cd08221 46 ALNEIVILSLLQ-----HPNIIAYYNHF-MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK 119 (256)
T ss_pred HHHHHHHHHhCC-----CCCeeEEEeEE-ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 455665555542 232 2222333 3345679999999999999865432 1223444433333 2234678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|.||+++. ++.++++|||.+..+...... . ....+...++++++..-.......|.+++...+
T Consensus 120 ~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~~~~~~~~~~--~----~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~ 191 (256)
T cd08221 120 AGILHRDIKTLNIFLTK--AGLIKLGDFGISKILGSEYSM--A----ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVL 191 (256)
T ss_pred CCccccCCChHhEEEeC--CCCEEECcCcceEEccccccc--c----cccCCCccccCHhhcCCCCCCCcchhHHHHHHH
Confidence 99999999999999986 789999999999877554310 0 111234455666655433345567999998777
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 192 ~~l~ 195 (256)
T cd08221 192 YELL 195 (256)
T ss_pred HHHH
Confidence 6654
No 264
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.28 E-value=5e-11 Score=123.83 Aligned_cols=181 Identities=17% Similarity=0.149 Sum_probs=116.4
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||.|++|.||+|+. +|+.||||+..+..... .+ .+-.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------~~------~~~~~~ 41 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE---------------------------------TG------QQEHIF 41 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh---------------------------------hh------HHHHHH
Confidence 68999999999999 38999999874321000 00 112345
Q ss_pred HHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 386 QEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
+|.+.+.++. ++++ .+...+ ......+++|||++|++|.++.... .......+...+ +...+..+|..|+
T Consensus 42 ~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 42 SEKEILEECN-----HPFIVKLYRTF-KDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred HHHHHHHhCC-----CCCEeeeeeeE-EcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 5555444432 2322 222222 3345679999999999998865322 123333332222 3344788999999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
+|+|++|.||+++. ++.++++|||.+..+....... ...++..++.++...........|.+++...++++
T Consensus 115 ~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~~~~~-------~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l 185 (262)
T cd05572 115 IYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSGQKTW-------TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYEL 185 (262)
T ss_pred ccCCCCHHHEEEcC--CCCEEEeeCCcccccCcccccc-------cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHH
Confidence 99999999999985 8899999999999886643111 11234456666665544456677999988777665
Q ss_pred H
Q 004115 543 L 543 (773)
Q Consensus 543 l 543 (773)
+
T Consensus 186 ~ 186 (262)
T cd05572 186 L 186 (262)
T ss_pred H
Confidence 4
No 265
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.28 E-value=2.1e-11 Score=142.89 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=77.6
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCC-----------------H-HHHHHHH---HHHHHHHHHhCCCccCCCCCCce
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVD-----------------R-KRLGRYA---VESYLEQILSHGFFHADPHPGNI 472 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d-----------------~-~~la~~l---i~~~l~qI~~~GffHaDpHPGNI 472 (773)
....+|||||+++.+|.++......... + ...+..+ +...+.++|..|++|+|+||.||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3567999999999999886532211100 0 1111111 22347889999999999999999
Q ss_pred EEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC----------------------CCC
Q 004115 473 AVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV----------------------PTG 530 (773)
Q Consensus 473 LV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~----------------------~~~ 530 (773)
|+++ .++.++++|||++..+....... ..-...++.+++++...+.... ...
T Consensus 287 Ll~~-~~~~~KL~DFGlA~~l~~~~~~~-----~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 287 IFSE-GSGSFKIIDLGAAADLRVGINYI-----PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred EEeC-CCCcEEEEeCCCccccccccccC-----CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9984 35789999999998664321100 0011235566666654332221 224
Q ss_pred ChHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFL 543 (773)
Q Consensus 531 D~~~l~~~i~~~l 543 (773)
|++++...+++++
T Consensus 361 DVwSlGviL~el~ 373 (566)
T PLN03225 361 DIYSAGLIFLQMA 373 (566)
T ss_pred ccHHHHHHHHHHH
Confidence 9999998877665
No 266
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.28 E-value=2.6e-11 Score=126.19 Aligned_cols=185 Identities=18% Similarity=0.100 Sum_probs=115.5
Q ss_pred cccccceeEEEEEeec--------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARLK--------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 307 PIgsaSiGQVhrA~l~--------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
.||.|++|.||+|+.. ++.|+||....+....
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------------- 41 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQ---------------------------------------- 41 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchh----------------------------------------
Confidence 5899999999999972 2578999653221100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh------cCCCHHHHHHHH--H
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------LGVDRKRLGRYA--V 450 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~------~~~d~~~la~~l--i 450 (773)
....|.+|+..+.++. ++++.-..-+.......+++|||++|++|.++..... ...+...+...+ +
T Consensus 42 -~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 115 (269)
T cd05044 42 -EKKEFLKEAHLMSNFN-----HPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDV 115 (269)
T ss_pred -hHHHHHHHHHHHHhcC-----CCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHH
Confidence 0113445555554442 2333222222233456799999999999988653211 112333333322 2
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCCC-----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNGG-----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 525 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g-----~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~ 525 (773)
...+..+|..|++|+|++|.||++++ ++ .++++|||++..+........ .+.......++.++...-+.
T Consensus 116 ~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 189 (269)
T cd05044 116 AKGCVYLEQMHFIHRDLAARNCLVSE--KGYDADRVVKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDGK 189 (269)
T ss_pred HHHHHHHHhCCcccCCCChheEEEec--CCCCCCcceEECCccccccccccccccc----CcccCCCccccCHHHHccCC
Confidence 23367889999999999999999985 44 799999999987643321100 00011234566677776677
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l 543 (773)
..+..|++++...+++++
T Consensus 190 ~~~~~Dv~slG~il~ell 207 (269)
T cd05044 190 FTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred cccchhHHHHHHHHHHHH
Confidence 788899999988777665
No 267
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.28 E-value=2.5e-11 Score=127.95 Aligned_cols=182 Identities=16% Similarity=0.196 Sum_probs=107.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||+|+.+...... -.. .
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 45 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES-----------------------------------KFN------Q 45 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH-----------------------------------HHH------H
Confidence 5799999999999999 58999999774221110 001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh--hcCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--ELGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--~~~~d~~~la~~li~--~~l~qI~~ 459 (773)
+.+|+..+.++.+ ..-+.+...+ ......++||||++|.++.++.... ....+...+...+.+ ..+..+|.
T Consensus 46 ~~~e~~~l~~~~~----~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 46 IIMELDILHKAVS----PYIVDFYGAF-FIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred HHHHHHHHHhcCC----CcHHhhhhhe-ecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2223332222211 0011111111 1134578999999999998765432 113343333332222 33567785
Q ss_pred -CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC------CCCCCh
Q 004115 460 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL------VPTGDT 532 (773)
Q Consensus 460 -~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~------~~~~D~ 532 (773)
.|++|+|++|.||+++. ++.++++|||++..+....... ..+.+.++.++....+.. ....|.
T Consensus 121 ~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di 190 (286)
T cd06622 121 EHNIIHRDVKPTNVLVNG--NGQVKLCDFGVSGNLVASLAKT--------NIGCQSYMAPERIKSGGPNQNPTYTVQSDV 190 (286)
T ss_pred cCCEeeCCCCHHHEEECC--CCCEEEeecCCcccccCCcccc--------CCCccCccCcchhcCCCCCccCCCCcccch
Confidence 69999999999999986 7899999999987764332111 112334455555433322 456799
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+.+++
T Consensus 191 wslG~il~~l~ 201 (286)
T cd06622 191 WSLGLSILEMA 201 (286)
T ss_pred HhHHHHHHHHH
Confidence 99887766654
No 268
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.28 E-value=3.8e-11 Score=125.91 Aligned_cols=182 Identities=18% Similarity=0.223 Sum_probs=109.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||..++..... .+.+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~~ 45 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-----------------------------------------EQKR 45 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-----------------------------------------HHHH
Confidence 5799999999999999 59999999875432111 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHHHH--HHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAVE--SYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l---~~~~~d~~~la~~li~--~~l~qI 457 (773)
+..|.....+ .. +++++ .+...+ ......+++|||++| .+.++... .....+...+...+.+ ..+..+
T Consensus 46 ~~~e~~~~~~---~~-~~~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 46 LLMDLDISMR---SV-DCPYTVTFYGAL-FREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred HHHHHHHHHH---Hc-CCCCeeeeeEEE-ecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2223222222 11 22332 222222 234567999999986 55554321 1122344443333322 346788
Q ss_pred HhC-CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCCh
Q 004115 458 LSH-GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDT 532 (773)
Q Consensus 458 ~~~-GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l----G~~~~~~D~ 532 (773)
|.+ |++|+|+||+||+++. ++.++++|||++..+....... ...+...+++++...- .......|.
T Consensus 120 H~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di 190 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINR--NGQVKLCDFGISGYLVDSVAKT-------IDAGCKPYMAPERINPELNQKGYDVKSDV 190 (283)
T ss_pred hhcCCeecCCCCHHHEEECC--CCCEEEeecccccccccccccc-------cccCCccccChhhcCCcccccccCccccc
Confidence 887 9999999999999985 8899999999988765432110 0112333455554432 112456799
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+.+++
T Consensus 191 ~slG~~l~~l~ 201 (283)
T cd06617 191 WSLGITMIELA 201 (283)
T ss_pred hhhHHHHHHHH
Confidence 99987776655
No 269
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.28 E-value=5.9e-11 Score=123.13 Aligned_cols=181 Identities=16% Similarity=0.134 Sum_probs=115.8
Q ss_pred cccccceeEEEEEee--c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~---G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
-||.|++|+||+|+. + +..||+|+.++.... ..+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------------~~~ 40 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-----------------------------------------AGK 40 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch-----------------------------------------HHH
Confidence 489999999999987 2 268999987433211 012
Q ss_pred HHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 458 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~ 458 (773)
-++..|.+.+.++. +++ +.+...+ .....+++|||++|++|.++..... ..+...+...+.+ ..+..+|
T Consensus 41 ~~~~~e~~~l~~l~-----h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh 112 (257)
T cd05060 41 KEFLREASVMAQLD-----HPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE 112 (257)
T ss_pred HHHHHHHHHHHhcC-----CCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 23444554444431 222 2222222 2456799999999999998754322 2344433333322 3367789
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHh--hcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIY--EKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~--~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
..|++|+|++|.||+++. ++.++++|||++..+....... .... .....++.++....+......|++++.
T Consensus 113 ~~~i~H~di~p~nili~~--~~~~kl~df~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 185 (257)
T cd05060 113 SKHFVHRDLAARNVLLVN--RHQAKISDFGMSRALGAGSDYY-----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYG 185 (257)
T ss_pred hcCeeccCcccceEEEcC--CCcEEeccccccceeecCCccc-----ccccCccccccccCHHHhcCCCCCccchHHHHH
Confidence 999999999999999986 8899999999998775432210 0000 111245667777667777788999998
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
-.+.+++
T Consensus 186 ~~l~~~~ 192 (257)
T cd05060 186 VTLWEAF 192 (257)
T ss_pred HHHHHHH
Confidence 7766654
No 270
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.28 E-value=4e-11 Score=124.58 Aligned_cols=194 Identities=13% Similarity=0.091 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +|+.||+|+.++....... .. ...-+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~------------------------------~~------~~~~~ 49 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE------------------------------QE------EVVEA 49 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh------------------------------HH------HHHHH
Confidence 5799999999999997 6899999987533211100 00 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~G 461 (773)
+..|++.+.++++ ..-+.+..++ ......+++|||++|++|.++.... ...+...+... .+-..+..+|..|
T Consensus 50 ~~~e~~~l~~l~h----~~iv~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 50 LRKEIRLMARLNH----PHIIRMLGAT-CEDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHcCC----Cceehhhcee-ccCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556665555432 1112222222 2345679999999999999875321 22333333322 2234467899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++..++++|||+...+....... ........+...++.+++..-.......|.+++...+.+
T Consensus 124 i~H~~i~~~nil~~~-~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 124 IIHRDVKGANLLIDS-TGQRLRIADFGAAARLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred eecCCCCHHHEEEcC-CCCEEEEcccccccccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 999999999999974 23469999999998876431100 000000112334555555543444566899999887766
Q ss_pred HHH
Q 004115 542 FLN 544 (773)
Q Consensus 542 ~l~ 544 (773)
++.
T Consensus 201 l~~ 203 (268)
T cd06630 201 MAT 203 (268)
T ss_pred HHh
Confidence 653
No 271
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.28 E-value=3.1e-11 Score=126.97 Aligned_cols=182 Identities=17% Similarity=0.119 Sum_probs=114.6
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||.|++|.||+|.. +|+.||+|+........ -..+-.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~---------------------------------------~~~~~~~~ 41 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK---------------------------------------RKGEQMAL 41 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh---------------------------------------hhhhHHHH
Confidence 68999999999987 69999999874321000 00122344
Q ss_pred HHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 386 QEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.|...+.++. ++++ .+..++ +.....+++|||++|++|.++..... .......+...+ +...+..+|..|
T Consensus 42 ~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 115 (277)
T cd05577 42 NEKKILEKVS-----SRFIVSLAYAF-ETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115 (277)
T ss_pred HHHHHHHhCC-----CCCEeeeeeEE-ecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555555543 2332 222233 33456799999999999988653222 123333333222 234467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||++++ ++.++++|||.+..+...... ....+...++.++...-+......|++++...+.+
T Consensus 116 i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 116 IVYRDLKPENVLLDD--HGNVRISDLGLAVELKGGKKI-------KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred cccCCCCHHHEEECC--CCCEEEccCcchhhhccCCcc-------ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 999999999999985 789999999988766432111 01122334555665554555667899998876665
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 187 l~ 188 (277)
T cd05577 187 MI 188 (277)
T ss_pred Hh
Confidence 54
No 272
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.28 E-value=5.4e-11 Score=123.08 Aligned_cols=187 Identities=18% Similarity=0.125 Sum_probs=117.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||.|++|+||+|.. +|..|++|+........ ..-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~~~ 45 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-----------------------------------------SVDE 45 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-----------------------------------------HHHH
Confidence 6799999999999998 68899999873211000 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhh--cCCCHHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAV--ESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~--~~~d~~~la~~li--~~~l~qI 457 (773)
+..|+..+..+. ++++ +.++ .......+++|||++|.++.++..... ...+...+...+. ...+..+
T Consensus 46 ~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l 118 (267)
T cd06610 46 LRKEVQAMSQCN-----HPNV--VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL 118 (267)
T ss_pred HHHHHHHHHhcC-----CCCE--EEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 344444333332 2222 2222 233456799999999999998754321 2344444333322 2336788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~ 536 (773)
|..|++|+|++|.||++++ ++.++|+|||++..+........ . ......+...++.++....+ ......|++++.
T Consensus 119 h~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~~~~~~~~~~~~-~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG 194 (267)
T cd06610 119 HSNGQIHRDIKAGNILLGE--DGSVKIADFGVSASLADGGDRTR-K-VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG 194 (267)
T ss_pred HhCCeecCCCCHHhEEEcC--CCCEEEcccchHHHhccCccccc-c-ccccccCChhhcChHHHccccCcCcccchHhHh
Confidence 9999999999999999986 78999999999987765432210 0 00111234445556655554 456678999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+.+++.
T Consensus 195 ~i~~~l~~ 202 (267)
T cd06610 195 ITAIELAT 202 (267)
T ss_pred HHHHHHHh
Confidence 77766543
No 273
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.28 E-value=4.9e-11 Score=126.01 Aligned_cols=188 Identities=15% Similarity=0.130 Sum_probs=113.7
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|+||+|+. +|+.||||+.+...... ....
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~--------------------------------------~~~~ 47 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ--------------------------------------KAKT 47 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh--------------------------------------hhhH
Confidence 5799999999999986 36889999874210000 0000
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.-.+.+|.+.+.++. +++++.-..-..+.....++||||++|++|.+..... .......+...+ +...+..+|
T Consensus 48 ~~~~~~E~~~l~~~~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH 122 (288)
T cd05583 48 AEHTRTERQVLEAVR----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLH 122 (288)
T ss_pred HHHHHHHHHHHHhcc----CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHH
Confidence 112344444444432 2233322222223345678999999999998764321 223333333222 233467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCChHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVR 536 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~--~~~~~D~~~l~ 536 (773)
..|++|+|+||.||+++. ++.++++|||++..+....... .....++..++.++....+. .....|.+++.
T Consensus 123 ~~~~~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (288)
T cd05583 123 QLGIIYRDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEER-----AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195 (288)
T ss_pred HCCeeccCCCHHHeEECC--CCCEEEEECccccccccccccc-----cccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence 999999999999999985 7899999999988765432110 00112344555565554333 45567899888
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 196 ~il~el~ 202 (288)
T cd05583 196 VLTFELL 202 (288)
T ss_pred HHHHHHH
Confidence 7766554
No 274
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.28 E-value=3.8e-11 Score=126.93 Aligned_cols=188 Identities=16% Similarity=0.171 Sum_probs=113.6
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|.||.|+. +|+.||+|+.+...... . ....+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~-------------------~-------------~~~~~---- 49 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ-------------------K-------------AKTTE---- 49 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh-------------------c-------------chHHH----
Confidence 5689999999999986 58899999874321100 0 00011
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.+..|.+.+.++. +++.+.-....-+.....++||||++|++|.++.... .......+...+ +...+..+|
T Consensus 50 --~~~~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH 122 (290)
T cd05613 50 --HTRTERQVLEHIR----QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLH 122 (290)
T ss_pred --HHHHHHHHHHhcc----cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 1233443343332 2232222211222344568999999999998865322 223444443332 334478899
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCChHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDTTAVR 536 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l--G~~~~~~D~~~l~ 536 (773)
..|++|+|++|.||+++. +++++++|||++..+......... ...+...++.++...- +......|++++.
T Consensus 123 ~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (290)
T cd05613 123 KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAY-----SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMG 195 (290)
T ss_pred hCCeeccCCCHHHeEECC--CCCEEEeeCccceecccccccccc-----cccCCcccCChhhccCCCCCCCccccHHHHH
Confidence 999999999999999985 889999999999877543211110 0122333445554432 2234567999988
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 196 ~~l~~ll 202 (290)
T cd05613 196 VLMYELL 202 (290)
T ss_pred HHHHHHh
Confidence 7766554
No 275
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.28 E-value=5.3e-11 Score=125.84 Aligned_cols=124 Identities=20% Similarity=0.151 Sum_probs=84.1
Q ss_pred CCCeEEEEeecCCCChhhhhhhhh----------cCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCc
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDE----------LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGR 481 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~----------~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~ 481 (773)
....+++|||++|.+|.++..... ...+...+...+.+ ..+..+|..|++|+|++|.||+++. ++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCc
Confidence 356799999999999988653221 12344444333322 3367889999999999999999986 789
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 482 LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 482 I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
++++|||++..+........ .........+++++...-+...+..|++++.-.+++++
T Consensus 169 ~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 169 IKIADFGMSRNLYSSDYYRV----QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred eEEccccceeecccCcceee----cCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHH
Confidence 99999999886643221110 01111234566777766666778889999987776654
No 276
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.28 E-value=2.2e-11 Score=128.05 Aligned_cols=182 Identities=14% Similarity=0.181 Sum_probs=112.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|+||+|+. +|+.||+|+....-.. .-+
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-------------------------------------------~~~ 58 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-------------------------------------------EEE 58 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH-------------------------------------------HHH
Confidence 5799999999999999 6899999987321000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--------cCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHH--HHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE--------YTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRY--AVES 452 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--------~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~--li~~ 452 (773)
+..|...+.++. +++++ .+.+.. .....+++|||++|+++.++..... ...+...+... .+..
T Consensus 59 ~~~e~~~l~~~~----~h~~i--~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 132 (282)
T cd06636 59 IKLEINMLKKYS----HHRNI--ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR 132 (282)
T ss_pred HHHHHHHHHHhc----CCCcE--EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence 233443333332 22222 222211 1235699999999999988754322 22333333222 2334
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCC
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLV 527 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~~ 527 (773)
.+..+|..|++|+|++|.||++++ ++.++++|||++..+....... ....++..+++++.+.. ....
T Consensus 133 al~~LH~~~ivH~dl~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~l~~~~~~~~~~~ 204 (282)
T cd06636 133 GLAHLHAHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACDENPDATYD 204 (282)
T ss_pred HHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCcchhhhhccccCC------CcccccccccCHhhcCcccCcCcCCC
Confidence 578899999999999999999986 7899999999988664322110 01123445666665432 1233
Q ss_pred CCCChHHHHHHHHHHHH
Q 004115 528 PTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 528 ~~~D~~~l~~~i~~~l~ 544 (773)
...|.+++...+.+++.
T Consensus 205 ~~~DvwslG~~l~el~~ 221 (282)
T cd06636 205 YRSDIWSLGITAIEMAE 221 (282)
T ss_pred cccchhHHHHHHHHHHh
Confidence 45799999877766653
No 277
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.27 E-value=4.5e-11 Score=126.20 Aligned_cols=123 Identities=13% Similarity=0.121 Sum_probs=85.1
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 492 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~ 492 (773)
...+++|||++|++|.++........+...+.... +...+..+|..|++|+|++|.||++++ ++.++++|||++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIADFGVADL 158 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEcCCcccee
Confidence 45689999999999998764433334444443332 223477899999999999999999985 78999999999987
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 493 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 493 Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+.+....... ....+...++.++....+..+...|++++...+.+++
T Consensus 159 ~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~ 205 (279)
T cd05111 159 LYPDDKKYFY----SEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205 (279)
T ss_pred ccCCCccccc----CCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 7544322111 1112233455666666666777789999987776655
No 278
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.27 E-value=1.9e-11 Score=138.97 Aligned_cols=119 Identities=17% Similarity=0.147 Sum_probs=75.9
Q ss_pred eEEEEeecCCCChhhhhh-h--hhcCCCHHHHHHH--HHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeeccee
Q 004115 417 QILTMEYVPGIKINRIQS-L--DELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 417 ~vLVMEyieG~~L~d~~~-l--~~~~~d~~~la~~--li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~ 491 (773)
.++||||++| .+.++.. . ....+....+... .+...+..+|..|++|||+||.||+++. .++.++|+|||++.
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCceeeeccccch
Confidence 4689999997 4444321 1 1122333322222 2334578899999999999999999975 34579999999998
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHHH
Q 004115 492 SISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 492 ~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~~~l~ 544 (773)
.+....... -..+.+.++++++..- .......|++++...+++++.
T Consensus 220 ~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt 266 (440)
T PTZ00036 220 NLLAGQRSV-------SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMIL 266 (440)
T ss_pred hccCCCCcc-------cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 775432210 0123455677776532 234566799999888777654
No 279
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.27 E-value=3.5e-11 Score=123.93 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=117.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +++.||||+....... .+. .-.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~------~~~ 45 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT----------------------------------KDE------RLA 45 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc----------------------------------cHH------HHH
Confidence 6799999999999998 6899999987322100 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|+..+.++. ++++.-..-+.......++||||++|++|.++..... ...+...+...+ +...+..+|..
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 46 AQNECQVLKLLS-----HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHhhCC-----CCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445555444442 2322211112223456799999999999998754322 223444443332 22346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|++|+||++++ .++.+++.|||++..+....... ...+...+++++...........|++++...+.
T Consensus 121 ~i~h~dl~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 192 (256)
T cd08220 121 LILHRDLKTQNILLDK-HKMVVKIGDFGISKILSSKSKAY-------TVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 192 (256)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEEccCCCceecCCCcccc-------ccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence 9999999999999975 34578999999999876542211 012334455566655555566789999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 ~l~ 195 (256)
T cd08220 193 ELA 195 (256)
T ss_pred HHH
Confidence 554
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.27 E-value=2.2e-11 Score=128.66 Aligned_cols=184 Identities=15% Similarity=0.093 Sum_probs=111.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|.||+|+. +|+.||||..++..... . ...
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~------------------------~-----------------~~~ 49 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG------------------------A-----------------PFT 49 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC------------------------C-----------------chh
Confidence 7899999999999998 68999999875432110 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|...+.++. ++++.-..-+.......++||||++| +|.++........+...+...+ +...+..+|..|
T Consensus 50 ~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 123 (291)
T cd07844 50 AIREASLLKDLK-----HANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR 123 (291)
T ss_pred HHHHHHHHhhCC-----CcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 234544444442 23332222222334567999999997 7776543222234444433332 234478899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.++++|||.+...+......- .. .....++.+++.. ........|++++...+.
T Consensus 124 i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~-~~-----~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 124 VLHRDLKPQNLLISE--RGELKLADFGLARAKSVPSKTYS-NE-----VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY 195 (291)
T ss_pred eecccCCHHHEEEcC--CCCEEECccccccccCCCCcccc-cc-----ccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence 999999999999986 78999999999876532211100 00 0122233344332 222345678999887776
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 196 ~l~~ 199 (291)
T cd07844 196 EMAT 199 (291)
T ss_pred HHHh
Confidence 6553
No 281
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.27 E-value=6.3e-11 Score=125.34 Aligned_cols=183 Identities=15% Similarity=0.138 Sum_probs=112.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|.||+|+. +|+.||+|+..+.-. . .. +
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~------------------------------~-------~~------~ 64 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD------------------------------V-------DE------E 64 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc------------------------------H-------HH------H
Confidence 6899999999999998 689999998743210 0 00 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec----cCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHH--HHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWE----YTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESY 453 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l---~~~~~d~~~la~~l--i~~~ 453 (773)
+..|...+.++. +++++ .+...+.. .....++||||++|++|.++... .........+...+ +...
T Consensus 65 ~~~e~~~l~~l~----~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 140 (291)
T cd06639 65 IEAEYNILQSLP----NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG 140 (291)
T ss_pred HHHHHHHHHHhc----CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 223444443332 22322 22222211 12357999999999999886531 11223333332222 2344
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-----CCC
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-----LVP 528 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~-----~~~ 528 (773)
+..+|..|++|+|++|+||+++. ++.++++|||.+..+....... ....+...++.++....+. ...
T Consensus 141 l~~lH~~~ivH~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~ 212 (291)
T cd06639 141 LQHLHNNRIIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQYDYSYDA 212 (291)
T ss_pred HHHHHhCCeeccCCCHHHEEEcC--CCCEEEeecccchhcccccccc------cCccCCccccChhhhcCCCCcccccCC
Confidence 78899999999999999999985 7899999999988765432111 0112344455565554332 245
Q ss_pred CCChHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFL 543 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l 543 (773)
..|++++...+.+++
T Consensus 213 ~~Di~slGvi~~el~ 227 (291)
T cd06639 213 RCDVWSLGITAIELG 227 (291)
T ss_pred ccchHHHHHHHHHHh
Confidence 679999987766654
No 282
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.27 E-value=1.5e-11 Score=137.87 Aligned_cols=172 Identities=16% Similarity=0.170 Sum_probs=124.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+=+|+|+-|.|++|++.++.||||-. .+.-+.|++
T Consensus 130 eWlGSGaQGAVF~Grl~netVAVKKV----~elkETdIK----------------------------------------- 164 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNETVAVKKV----RELKETDIK----------------------------------------- 164 (904)
T ss_pred hhhccCcccceeeeeccCceehhHHH----hhhhhhhHH-----------------------------------------
Confidence 56999999999999999999999954 223233333
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCC---eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTP---QILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~---~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+++++++ ++|.--+ ..|++ .+++||||.-+.|..+.... ..+.+..++.-. +..-+.++|.|
T Consensus 165 ----HLRkLkH-----~NII~Fk---GVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~h 231 (904)
T KOG4721|consen 165 ----HLRKLKH-----PNIITFK---GVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLH 231 (904)
T ss_pred ----HHHhccC-----cceeeEe---eeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHh
Confidence 3333321 2221111 12333 48999999999999876433 235666666543 44557889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
.++|||+|.-||||.. +..|++.|||-.+.+++.- . .| -+.+....|+++++.-.-....+|+++|...+-
T Consensus 232 KIIHRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S-T---kM---SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLW 302 (904)
T KOG4721|consen 232 KIIHRDLKSPNILISY--DDVVKISDFGTSKELSDKS-T---KM---SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLW 302 (904)
T ss_pred hHhhhccCCCceEeec--cceEEeccccchHhhhhhh-h---hh---hhhhhHhhhCHHHhhcCCcccccceehhHHHHH
Confidence 9999999999999986 7889999999998887641 1 11 135788999999999888888899999998876
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
++|.
T Consensus 303 EmLT 306 (904)
T KOG4721|consen 303 EMLT 306 (904)
T ss_pred HHHh
Confidence 6654
No 283
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.27 E-value=6e-11 Score=124.06 Aligned_cols=184 Identities=16% Similarity=0.128 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..||.|++|.||+|... +..|++|....+...
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~----------------------------------------- 50 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM----------------------------------------- 50 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-----------------------------------------
Confidence 67999999999999983 268999986432110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc---------CCCHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGR 447 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~---------~~d~~~la~ 447 (773)
.....|.+|+..+..+. +++ +.+++. ......+++|||++|++|.++...... ..+...+..
T Consensus 51 ~~~~~~~~e~~~l~~~~-----~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 51 RERIEFLNEASVMKEFN-----CHH--VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred HHHHHHHHHHHHHHhCC-----CCc--eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 01224555655554432 222 222322 334567999999999999986532111 122233333
Q ss_pred HH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004115 448 YA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 525 (773)
Q Consensus 448 ~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~ 525 (773)
.+ +...+..+|..|++|+|++|.||+++. ++.++++|||++..+........ .+.......+++++...-+.
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 197 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAE--DLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGV 197 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcC--CCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhcCC
Confidence 22 223468899999999999999999986 88999999999876644321000 00111223456666666667
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l 543 (773)
..+..|++++...+.+++
T Consensus 198 ~~~~~Di~slG~il~el~ 215 (277)
T cd05032 198 FTTKSDVWSFGVVLWEMA 215 (277)
T ss_pred CCcccchHHHHHHHHHhh
Confidence 777889999987776654
No 284
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.27 E-value=4.1e-11 Score=126.05 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=110.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||+|+..+.... .-+
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-------------------------------------------~~~ 60 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-------------------------------------------DEE 60 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch-------------------------------------------HHH
Confidence 6899999999999998 6899999986431100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-------cCCCeEEEEeecCCCChhhhhhh--h-hcCCCHHHHHHHH--HH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE-------YTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VE 451 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-------~st~~vLVMEyieG~~L~d~~~l--~-~~~~d~~~la~~l--i~ 451 (773)
+.+|.+.+.++. ++++ +++++.. .....+++|||++|++|.++... . ....+...+...+ +.
T Consensus 61 ~~~e~~~l~~l~----~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~ 134 (286)
T cd06638 61 IEAEYNILKALS----DHPN--VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEAL 134 (286)
T ss_pred HHHHHHHHHHHh----cCCC--eeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHH
Confidence 233443333332 1222 2333321 12346999999999999886431 1 1122322222222 23
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVL 526 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~~ 526 (773)
..+..+|..|++|+|++|+||++++ ++.++++|||++..+....... ....+...+++++.... +..
T Consensus 135 ~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~ 206 (286)
T cd06638 135 MGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQLDSTY 206 (286)
T ss_pred HHHHHHHhCCccccCCCHHhEEECC--CCCEEEccCCceeecccCCCcc------ccccCCCcccChhhhchhhhccccc
Confidence 3467889999999999999999986 7889999999988775432110 01123444555555432 223
Q ss_pred CCCCChHHHHHHHHHHH
Q 004115 527 VPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 527 ~~~~D~~~l~~~i~~~l 543 (773)
....|++++...+.+++
T Consensus 207 ~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 207 DARCDVWSLGITAIELG 223 (286)
T ss_pred cchhhhhhHHHHHHHHh
Confidence 45678888877665543
No 285
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.27 E-value=5.1e-11 Score=123.75 Aligned_cols=185 Identities=14% Similarity=0.098 Sum_probs=113.6
Q ss_pred cccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.||+|++|.||+|.+ +++.||||+.+...... . . .-
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~----~------~~ 41 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP------------------------------A----L------KD 41 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH------------------------------H----H------HH
Confidence 489999999999975 47899999874322110 0 0 11
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
++..|..-+.++ +++++.-..-+. .....+++|||++|++|.++.... ...+...+...+ +...+..+|..
T Consensus 42 ~~~~e~~~l~~l-----~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~ 114 (257)
T cd05116 42 ELLREANVMQQL-----DNPYIVRMIGIC-EAESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEET 114 (257)
T ss_pred HHHHHHHHHHhC-----CCCCcceEEEEE-cCCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 234444433333 223322111111 134568999999999998875422 223433333332 23446889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|++|+|+||.||++++ ++.++++|||++..+.......... ........+++++....+......|.+++...++
T Consensus 115 ~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05116 115 NFVHRDLAARNVLLVT--QHYAKISDFGLSKALGADENYYKAK---THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMW 189 (257)
T ss_pred CEeecccchhhEEEcC--CCeEEECCCccccccCCCCCeeeec---CCCCCCccccCHhHhccCCcCchhHHHHHHHHHH
Confidence 9999999999999985 7899999999998765432210000 0001123455666665566666789999987776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 190 el~ 192 (257)
T cd05116 190 EAF 192 (257)
T ss_pred HHH
Confidence 654
No 286
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.26 E-value=2.2e-10 Score=119.49 Aligned_cols=184 Identities=21% Similarity=0.210 Sum_probs=126.7
Q ss_pred cccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 307 PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+|.+|--|-||+|.. ++..||||+.+....+--. .-.+++. .|.+.....+...++..+ -+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~--------~~~Yi~g-d~Rf~~~~~~rr~lv~~W---------~~ 116 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR--------IRRYIQG-DPRFRNSRSNRRKLVFAW---------AR 116 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh--------HHHHHhc-ChhhhcCCCCHHHHHHHH---------HH
Confidence 799999999999998 7999999999877654322 1222211 122222233444444433 25
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC---CHHHHHHHHHHHHHHHHHhCCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV---DRKRLGRYAVESYLEQILSHGF 462 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~---d~~~la~~li~~~l~qI~~~Gf 462 (773)
.|-+|+.+..+ .+|.+|++|. .-++||+|||+.... .-...+...+. +...+...+++.+-.+....|+
T Consensus 117 kEf~NL~R~~e-----AGVrvP~Pi~--~~~nVLvMEfIg~~g-~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~L 188 (268)
T COG1718 117 KEFRNLKRAYE-----AGVRVPEPIA--FRNNVLVMEFIGDDG-LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGL 188 (268)
T ss_pred HHHHHHHHHHH-----cCCCCCCcee--ecCCeEEEEeccCCC-CCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCc
Confidence 68889999876 4699999994 668899999996541 11111221221 2344445555555566667999
Q ss_pred ccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004115 463 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 526 (773)
Q Consensus 463 fHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~ 526 (773)
+|+|+..-|||+. ++.+++||||.+-.++...-. .++.+|...+...+...|+-
T Consensus 189 VHgDLSEyNiL~~---~~~p~iID~~QaV~~~hp~a~-------e~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 189 VHGDLSEYNILVH---DGEPYIIDVSQAVTIDHPNAF-------EFLERDVRNIARFFRRKGVE 242 (268)
T ss_pred ccccchhhheEEE---CCeEEEEECccccccCCCchH-------HHHHHHHHHHHHHHHHcCCC
Confidence 9999999999997 689999999999888755433 34578999999999888863
No 287
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.26 E-value=4.4e-11 Score=123.93 Aligned_cols=183 Identities=13% Similarity=0.062 Sum_probs=114.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||.|++|.||+|.. +++.|++|+.+...... .-++
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~~ 49 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK------------------------------------------QQDF 49 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhh------------------------------------------HHHH
Confidence 5789999999999999 68899999863221100 0023
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
..|...+..+. ++++.-..-+.......+++|||++|++|.++..... ...+...+...+ +-..+..+|..|
T Consensus 50 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 50 QKEVQALKRLR-----HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred HHHHHHHhcCC-----CcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33443333331 1222111112233456799999999999998754322 223433333332 223367889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||++++ ++.+++.|||.+..+....... .-......++.++....+......|.+++...+++
T Consensus 125 i~h~dl~~~nilv~~--~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~ 196 (261)
T cd05148 125 SIHRDLAARNILVGE--DLVCKVADFGLARLIKEDVYLS------SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196 (261)
T ss_pred eeccccCcceEEEcC--CceEEEccccchhhcCCccccc------cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 8899999999998775432110 00111233455665555666667899999877666
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 197 l~ 198 (261)
T cd05148 197 MF 198 (261)
T ss_pred HH
Confidence 54
No 288
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.26 E-value=8.3e-11 Score=123.70 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=85.1
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCC-cEEEEeecce
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGG-RLIFYDFGMM 490 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g-~I~LlDFGlv 490 (773)
....++||||++|++|.++..... ..+...+...+.+ ..+..+|..|++|+|++|.||+++. ++ .++++|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCccc
Confidence 346799999999999988753322 3454444443332 3368899999999999999999986 55 8999999999
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 491 GSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 491 ~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
..++.... ..+...+++++...-+...+..|++++...+.+++.
T Consensus 158 ~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 201 (267)
T PHA03390 158 KIIGTPSC----------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT 201 (267)
T ss_pred eecCCCcc----------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 87764421 134455666777666556677899999877766553
No 289
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.26 E-value=5.9e-11 Score=123.09 Aligned_cols=126 Identities=13% Similarity=0.097 Sum_probs=81.0
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeeccee
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~ 491 (773)
.+..+++|||+.|++|.++............+... .+...+..+|..|++|+|++|.||++++ ++.+++.|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~~ 146 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLAR 146 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCccccc
Confidence 44579999999999999875432222233333222 2333467889999999999999999986 7899999999988
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 492 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 492 ~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.+.......... .........+++++...-+......|++++...+.+++
T Consensus 147 ~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 147 DIYDKEYYSVHN--HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred cccCCcceeecc--cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 664422110000 00011223455566555455556678998887766654
No 290
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.26 E-value=6.9e-11 Score=126.54 Aligned_cols=180 Identities=20% Similarity=0.173 Sum_probs=111.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|.||+|+. +|+.||+|+........ .+. .-+
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------------~~~------~~~ 61 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS---------------------------------NEK------WQD 61 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc---------------------------------HHH------HHH
Confidence 5699999999999998 68999999873211100 000 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|...+..+. ++++ .+..++ ......++||||++|. +.++........+...+...+ +...+..+|..
T Consensus 62 ~~~Ei~~l~~l~-----h~niv~~~~~~-~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 62 IIKEVRFLQQLR-----HPNTIEYKGCY-LREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred HHHHHHHHHhCC-----CCCEEEEEEEE-EeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344444444332 2332 223333 2345679999999874 444332222234444433332 33447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCChHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRR 537 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG~~~~~~D~~~l~~ 537 (773)
|++|+|++|+||++++ ++.+++.|||++...++... ..+.+.+++++... .+...+..|++++..
T Consensus 135 ~i~H~dl~p~nIl~~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~ 202 (307)
T cd06607 135 ERIHRDIKAGNILLTE--PGTVKLADFGSASLVSPANS----------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202 (307)
T ss_pred CceecCCCcccEEECC--CCCEEEeecCcceecCCCCC----------ccCCccccCceeeeccCCCCCCcccchHHHHH
Confidence 9999999999999986 78999999999987654321 12334455555431 244556789999987
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 203 il~el~ 208 (307)
T cd06607 203 TCIELA 208 (307)
T ss_pred HHHHHH
Confidence 766654
No 291
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.26 E-value=4.7e-11 Score=127.93 Aligned_cols=187 Identities=14% Similarity=0.092 Sum_probs=118.6
Q ss_pred cccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
.+.||.|++|+||+|+. .+..||||+.+...... .
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~--- 81 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSS-----------------------------------E--- 81 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChH-----------------------------------H---
Confidence 36899999999999975 24589999874332110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHH--HHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYA--VESY 453 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-~~d~~~la~~l--i~~~ 453 (773)
.-++.+|...+.++. +++++ .+... .......+++|||+.|++|.++...... ..+...+.... +...
T Consensus 82 ---~~~~~~E~~~l~~l~----~h~~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~ 153 (302)
T cd05055 82 ---REALMSELKIMSHLG----NHENIVNLLGA-CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKG 153 (302)
T ss_pred ---HHHHHHHHHHHHhcc----CCCCcceEEEE-EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 013455555555542 22322 22222 2334567999999999999887542221 13444443332 3334
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|..|++|+|++|.||++++ ++.++++|||++..+........ .+.......+++++....+...+..|++
T Consensus 154 l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diw 227 (302)
T cd05055 154 MAFLASKNCIHRDLAARNVLLTH--GKIVKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFNCVYTFESDVW 227 (302)
T ss_pred HHHHHHCCeehhhhccceEEEcC--CCeEEECCCcccccccCCCceee----cCCCCcccccCCHhhhccCCCCcHhHHH
Confidence 78899999999999999999985 78899999999987654321100 0111123446667766666667778999
Q ss_pred HHHHHHHHHH
Q 004115 534 AVRRTAQFFL 543 (773)
Q Consensus 534 ~l~~~i~~~l 543 (773)
++...+.+++
T Consensus 228 slGvil~el~ 237 (302)
T cd05055 228 SYGILLWEIF 237 (302)
T ss_pred HHHHHHHHHH
Confidence 9887766554
No 292
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.26 E-value=4.8e-11 Score=127.96 Aligned_cols=189 Identities=13% Similarity=0.123 Sum_probs=110.2
Q ss_pred CcccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+...||.|++|.||+|+. +++.||||+....-.
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------------------------------------------- 41 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------------------------------------------- 41 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-------------------------------------------
Confidence 346799999999999996 357899997732110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhh--------cCCCHHHHHHHH-
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDE--------LGVDRKRLGRYA- 449 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~--------~~~d~~~la~~l- 449 (773)
..+..+|++.+.++. +..-+.+..++... ....+++|||+++ .+.++..... ...+...+...+
T Consensus 42 -~~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 115 (317)
T cd07868 42 -SMSACREIALLRELK----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLY 115 (317)
T ss_pred -cHHHHHHHHHHHhcC----CCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHH
Confidence 001233444444432 22223333333222 2345899999976 5555432211 112222222221
Q ss_pred -HHHHHHHHHhCCCccCCCCCCceEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CC
Q 004115 450 -VESYLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GV 525 (773)
Q Consensus 450 -i~~~l~qI~~~GffHaDpHPGNILV~~--~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~ 525 (773)
+...+..+|..|++|+|+||.||++.. ..++.++++|||++..++..... .... .-..+...++++++..- ..
T Consensus 116 qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~~~--~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07868 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LADL--DPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc-cccc--CCccccccccCCHHHcCCCC
Confidence 223477889999999999999999952 13578999999999876543211 0000 00123445666665543 33
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l~ 544 (773)
.....|++++...+.+++.
T Consensus 193 ~~~~~DiwslG~il~el~~ 211 (317)
T cd07868 193 YTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred cCchhhHHHHHHHHHHHHh
Confidence 4566899999887776653
No 293
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.25 E-value=3.5e-11 Score=126.36 Aligned_cols=183 Identities=14% Similarity=0.122 Sum_probs=109.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+.+...... ... -.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~------~~ 45 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE----------------------------------GVP------ST 45 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC----------------------------------Cch------HH
Confidence 5799999999999998 58999999874321100 000 11
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhh-hh-cCCCHHHHHHHH--HHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DE-LGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~-~~~d~~~la~~l--i~~~l~qI~ 458 (773)
+.+|+..+.++. ++++ .+...+ ......++||||++| .+.++... .. ...+...+...+ +...+..+|
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH 118 (285)
T cd07861 46 AIREISLLKELQ-----HPNIVCLQDVL-MQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118 (285)
T ss_pred HHHHHHHHHhcC-----CCCEeeeEEEE-eeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 233444444442 2222 222222 224567999999986 56554322 11 224444443332 223467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 537 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~ 537 (773)
..|++|+|++|.||+++. ++.++|+|||++..+....+..-. -.....+++++..... ......|++++..
T Consensus 119 ~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 190 (285)
T cd07861 119 SRRVLHRDLKPQNLLIDN--KGVIKLADFGLARAFGIPVRVYTH------EVVTLWYRAPEVLLGSPRYSTPVDIWSIGT 190 (285)
T ss_pred hCCeeecCCCHHHEEEcC--CCcEEECcccceeecCCCcccccC------CcccccccChHHhcCCCCcCcHHHHHHHHH
Confidence 999999999999999985 899999999999876443211000 0112334555544322 2344578888887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 191 il~~l~ 196 (285)
T cd07861 191 IFAEMA 196 (285)
T ss_pred HHHHHH
Confidence 766654
No 294
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.25 E-value=6.6e-11 Score=123.30 Aligned_cols=188 Identities=15% Similarity=0.085 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.|+||+.+...... +.. .+ --.
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------~~~---~~-------~~~ 50 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP---------------------------ETS---KE-------VNA 50 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc---------------------------ccH---HH-------HHH
Confidence 5799999999999998 58999999874321110 000 00 013
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc----CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY----TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~----st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
+.+|++.+.++. +++ +++.+..+ ....+++|||++|++|.++.... ...+.......+ +...+..+
T Consensus 51 ~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~l 122 (265)
T cd06652 51 LECEIQLLKNLL-----HER--IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYL 122 (265)
T ss_pred HHHHHHHHHhcC-----CCC--eeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 455666555553 232 22223211 23457999999999998864322 123333222222 23446788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|++|.||++++ ++.++++|||+...+....... .. . ....+...+++++........+..|.+++..
T Consensus 123 H~~~i~H~dl~p~nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-~~-~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 197 (265)
T cd06652 123 HSNMIVHRDIKGANILRDS--VGNVKLGDFGASKRLQTICLSG-TG-M-KSVTGTPYWMSPEVISGEGYGRKADIWSVGC 197 (265)
T ss_pred HhCCEecCCCCHHHEEecC--CCCEEECcCccccccccccccc-cc-c-ccCCCCccccChhhhcCCCCCcchhHHHHHH
Confidence 9999999999999999985 8899999999888664321000 00 0 0012333455566555445566789999987
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 198 il~el~ 203 (265)
T cd06652 198 TVVEML 203 (265)
T ss_pred HHHHHh
Confidence 776654
No 295
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.25 E-value=9.4e-12 Score=134.34 Aligned_cols=181 Identities=22% Similarity=0.275 Sum_probs=106.1
Q ss_pred CcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.+-+|+||||-||+|.+ ++++||||-..|+-+-. . +|
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-n---------------------------------------rE 67 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-N---------------------------------------RE 67 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-c---------------------------------------HH
Confidence 347899999999999999 68999999775543211 1 12
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCC----eEEEEeecCCCChhhhhhhh---hcCCCHH--HHHHHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTP----QILTMEYVPGIKINRIQSLD---ELGVDRK--RLGRYAVE 451 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~----~vLVMEyieG~~L~d~~~l~---~~~~d~~--~la~~li~ 451 (773)
+.+.+. . ++++|. .-..|...++. .-|||||++- +|.++...- ....+.. ++....+-
T Consensus 68 l~im~~----------l-~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlf 135 (364)
T KOG0658|consen 68 LQIMRK----------L-DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLF 135 (364)
T ss_pred HHHHHh----------c-CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHH
Confidence 222221 1 223322 22222211121 3689999974 566543310 1122211 22222233
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|.+|+.|||+||.|+||++ ..|.++++|||.++.+.+.+.. ...++.=.-+-|+.+ ...--.+...|
T Consensus 136 rgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPELi----fga~~Yt~~ID 208 (364)
T KOG0658|consen 136 RGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPELI----FGATEYTTSID 208 (364)
T ss_pred HHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCCcceeeccCCCc--eeEEEeccccCHHHH----cCccccCceeE
Confidence 3467788999999999999999986 5799999999999999776543 111111112233332 22223345678
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
+++..-.+.+++
T Consensus 209 iWSaGCV~aELl 220 (364)
T KOG0658|consen 209 IWSAGCVMAELL 220 (364)
T ss_pred EhhhhHHHHHHh
Confidence 888777666554
No 296
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.25 E-value=7.3e-11 Score=132.78 Aligned_cols=86 Identities=14% Similarity=0.069 Sum_probs=58.6
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D 531 (773)
..+..+|..|++|+|++|.||++++ ++.++++|||++..+........ .......+.++.++....+...+..|
T Consensus 250 ~aL~~LH~~~ivHrdlkp~NiLl~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~D 323 (401)
T cd05107 250 NGMEFLASKNCVHRDLAARNVLICE--GKLVKICDFGLARDIMRDSNYIS----KGSTFLPLKWMAPESIFNNLYTTLSD 323 (401)
T ss_pred HHHHHHhcCCcCcccCCcceEEEeC--CCEEEEEecCcceeccccccccc----CCCcCCCCceeChHHhcCCCCCcHhH
Confidence 3467899999999999999999985 78999999999987533211000 00001123455666666666667789
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 324 vwslGvil~e~l 335 (401)
T cd05107 324 VWSFGILLWEIF 335 (401)
T ss_pred HHHHHHHHHHHH
Confidence 999887666554
No 297
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.25 E-value=9e-11 Score=121.77 Aligned_cols=181 Identities=15% Similarity=0.176 Sum_probs=114.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+++|+|++|.||+|.. +++.|++|+..+... .+-+
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------------------------------------~~~~ 48 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-------------------------------------------EEEE 48 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCch-------------------------------------------hHHH
Confidence 7899999999999999 578999998743221 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc--------CCCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHH--H
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY--------TTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYA--V 450 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~--------st~~vLVMEyieG~~L~d~~~l~~---~~~d~~~la~~l--i 450 (773)
+..|...+.++. +++ .+++++..+ ....+++|||++|.+|.++..... ...+...+...+ +
T Consensus 49 ~~~e~~~l~~~~----~h~--~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql 122 (275)
T cd06608 49 IKEEYNILRKYS----NHP--NIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET 122 (275)
T ss_pred HHHHHHHHHHhc----CCC--ChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 444444444442 122 222332211 223689999999999988654221 233433333322 2
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----C
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----V 525 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-----~ 525 (773)
...+..+|..|++|+|++|.||+++. ++.++|+|||++..+....... ....+...++++++.... .
T Consensus 123 ~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~ 194 (275)
T cd06608 123 LRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLVDFGVSAQLDSTLGRR------NTFIGTPYWMAPEVIACDEQPDAS 194 (275)
T ss_pred HHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEECCCccceecccchhhh------cCccccccccCHhHhcccccccCC
Confidence 23467889999999999999999986 7899999999998765432211 111234445666654321 1
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l 543 (773)
.....|++++...+.+++
T Consensus 195 ~~~~~Dv~slG~il~~l~ 212 (275)
T cd06608 195 YDARSDVWSLGITAIELA 212 (275)
T ss_pred ccccccHHHhHHHHHHHH
Confidence 234579999987776655
No 298
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=1.4e-10 Score=116.15 Aligned_cols=139 Identities=24% Similarity=0.289 Sum_probs=102.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
.+++.|.=+.++.+.+.|.++++|..-|... ..+.+ -..+.+| .-.
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~Y-----------------------------R~p~L----D~klrr~-Rt~ 47 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRY-----------------------------RHPEL----DEKLRRE-RTR 47 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCccc-----------------------------CChHH----HHHHHHH-HHH
Confidence 3678899999999988888899998744322 22222 2222233 457
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 465 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHa 465 (773)
+||+.+.+.+. .+|.+|.+|.-......|||||++|..+.|..... +..+.+. +...+.-+|..|++|+
T Consensus 48 ~Earil~~a~~-----~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-----~~~~~r~-vG~~vg~lH~~givHG 116 (204)
T COG3642 48 REARILAKARE-----AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-----RPDLLRE-VGRLVGKLHKAGIVHG 116 (204)
T ss_pred HHHHHHHHHHH-----cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-----chHHHHH-HHHHHHHHHhcCeecC
Confidence 89999988876 36999999998888889999999999998764321 1122222 3344667899999999
Q ss_pred CCCCCceEEeccCCCcEEEEeecceec
Q 004115 466 DPHPGNIAVDDVNGGRLIFYDFGMMGS 492 (773)
Q Consensus 466 DpHPGNILV~~~~~g~I~LlDFGlv~~ 492 (773)
||.+.||++. ++++++||||+...
T Consensus 117 DLTtsNiIl~---~~~i~~IDfGLg~~ 140 (204)
T COG3642 117 DLTTSNIILS---GGRIYFIDFGLGEF 140 (204)
T ss_pred CCccceEEEe---CCcEEEEECCcccc
Confidence 9999999997 56799999999873
No 299
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.25 E-value=2.2e-11 Score=127.98 Aligned_cols=184 Identities=16% Similarity=0.142 Sum_probs=109.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+.+...... +. +-+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~----------------------------------~~------~~~ 45 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE----------------------------------GV------PSS 45 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc----------------------------------cC------ccc
Confidence 5799999999999999 69999999874321110 00 011
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+..|...+.++. ++++ .+...+ ......+++|||++| ++.+.........+...+...+. ...+..+|..
T Consensus 46 ~~~ei~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~ 118 (284)
T cd07839 46 ALREICLLKELK-----HKNIVRLYDVL-HSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH 118 (284)
T ss_pred hhHHHHHHHhcC-----CCCeeeHHHHh-ccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 223333333332 1221 111111 224567999999987 55554322222344444433332 2347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i 539 (773)
|++|+|+||+||+++. ++.+++.|||++..+....+.. .....+..++++++..-+ ......|.+++...+
T Consensus 119 ~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 190 (284)
T cd07839 119 NVLHRDLKPQNLLINK--NGELKLADFGLARAFGIPVRCY------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 190 (284)
T ss_pred CEecCCCCHHHEEEcC--CCcEEECccchhhccCCCCCCc------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHH
Confidence 9999999999999985 7899999999988764332110 001123344555554332 235567999998777
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 191 ~~l~t 195 (284)
T cd07839 191 AELAN 195 (284)
T ss_pred HHHHh
Confidence 66653
No 300
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.25 E-value=1.6e-10 Score=124.56 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=118.0
Q ss_pred hCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 292 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 292 lG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
++..++++|..+. .+|.|++|.||+|+. +|+.|++|+........ ..
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------~~ 63 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT-----------------------------NE 63 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-----------------------------hH
Confidence 3466777766544 499999999999998 68999999874321100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 449 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l 449 (773)
...++..|...+.++. +..-+.+..++. .....+++|||+.| .+.++........+...+...+
T Consensus 64 ----------~~~~~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~ 127 (313)
T cd06633 64 ----------KWQDIIKEVKFLQQLK----HPNTIEYKGCYL-KEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAIT 127 (313)
T ss_pred ----------HHHHHHHHHHHHHhCC----CCCCccEEEEEE-eCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHH
Confidence 0112344544444442 211222333332 23557999999987 4555433222234444443332
Q ss_pred --HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cC
Q 004115 450 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MG 524 (773)
Q Consensus 450 --i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG 524 (773)
+...+..+|..|++|+|++|.||++++ ++.++++|||++....+... ..++..++++++.. -+
T Consensus 128 ~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~ 195 (313)
T cd06633 128 HGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASKSSPANS----------FVGTPYWMAPEVILAMDEG 195 (313)
T ss_pred HHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCCcccCCCCC----------ccccccccChhhccccCCC
Confidence 334478889999999999999999985 78999999998875433211 12334455666543 23
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 004115 525 VLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 525 ~~~~~~D~~~l~~~i~~~l 543 (773)
......|++++...+.+++
T Consensus 196 ~~~~~sDv~slGvil~el~ 214 (313)
T cd06633 196 QYDGKVDVWSLGITCIELA 214 (313)
T ss_pred CCCchhhHHHHHHHHHHHH
Confidence 4455679999887666554
No 301
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.25 E-value=3.7e-11 Score=127.37 Aligned_cols=188 Identities=16% Similarity=0.133 Sum_probs=114.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|.. +|+.|+||..+...... ..++. +-.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------~~~~~------~~~ 48 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE-------------------------------AKDGI------NFT 48 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccc-------------------------------ccchh------hHH
Confidence 4699999999999998 58999999885433210 00001 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+.++. +..-+.+...+. .....++||||+ +++|.++........+...+...+ +...+..+|.+|
T Consensus 49 ~~~e~~~l~~~~----h~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 122 (298)
T cd07841 49 ALREIKLLQELK----HPNIIGLLDVFG-HKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW 122 (298)
T ss_pred HHHHHHHHhhcC----CCCChhhhheee-cCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 334444444432 111222223332 245679999999 778888654322134444443333 223477889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|+||+++. ++.++++|||++..+.......-. ......+++++.... .......|++++.-.+.
T Consensus 123 i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 194 (298)
T cd07841 123 ILHRDLKPNNLLIAS--DGVLKLADFGLARSFGSPNRKMTH------QVVTRWYRAPELLFGARHYGVGVDMWSVGCIFA 194 (298)
T ss_pred eeecCCChhhEEEcC--CCCEEEccceeeeeccCCCccccc------cccceeeeCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 999999999999986 889999999999877543211000 011233444554432 33455678999887776
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 195 e~~~ 198 (298)
T cd07841 195 ELLL 198 (298)
T ss_pred HHHc
Confidence 6553
No 302
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.25 E-value=9e-11 Score=123.99 Aligned_cols=186 Identities=16% Similarity=0.069 Sum_probs=112.6
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..||.|++|+||+|.. ++..||+|+.+.+.... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~---- 51 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-----------------------------------M---- 51 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH-----------------------------------H----
Confidence 6799999999999986 35789999874322110 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc--------------------
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-------------------- 438 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-------------------- 438 (773)
+-+|.+|...+.++. ++++.-..-+.......+++|||++|++|.++......
T Consensus 52 --~~~~~~ei~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
T cd05050 52 --QADFQREAALMAEFD-----HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124 (288)
T ss_pred --HHHHHHHHHHHHhcC-----CCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccc
Confidence 113444554444432 23322211122233457999999999999887542110
Q ss_pred -CCCHHHHHHHHH--HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHH
Q 004115 439 -GVDRKRLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADK 515 (773)
Q Consensus 439 -~~d~~~la~~li--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~ 515 (773)
..+...+...+. ...+..+|..|++|+|++|.||+++. ++.++++|||+...+....-..-. ........+
T Consensus 125 ~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y 198 (288)
T cd05050 125 LPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGE--NMVVKIADFGLSRNIYSADYYKAS----ENDAIPIRW 198 (288)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecC--CCceEECccccceecccCcccccc----CCCccChhh
Confidence 112222222222 23367889999999999999999985 889999999998765332100000 000112335
Q ss_pred HHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 516 VLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 516 i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
++++....+......|++++...+.+++
T Consensus 199 ~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 199 MPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred cCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 5566655555666789999987766654
No 303
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.24 E-value=5.2e-11 Score=127.39 Aligned_cols=184 Identities=11% Similarity=0.122 Sum_probs=112.4
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+.||+|++|+||+|++ +|+ .||+|+..+.....
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 51 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK----------------------------------------- 51 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH-----------------------------------------
Confidence 6799999999999997 454 57888764322110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~q 456 (773)
....+.+|...+.++. ++++ .+...+ .....+++|||++++++.++........+...+.... +...+..
T Consensus 52 ~~~~~~~e~~~~~~l~-----h~niv~~~~~~--~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 124 (303)
T cd05110 52 ANVEFMDEALIMASMD-----HPHLVRLLGVC--LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMY 124 (303)
T ss_pred HHHHHHHHHHHHHhCC-----CCCcccEEEEE--cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 0113455555444432 2332 222222 2345689999999999988754332223333333222 2334788
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
+|..|++|+|+||.||++.. ++.++++|||++..+.......-.. .......++.++...........|++++.
T Consensus 125 LH~~~ivH~dikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~DiwslG 198 (303)
T cd05110 125 LEERRLVHRDLAARNVLVKS--PNHVKITDFGLARLLEGDEKEYNAD----GGKMPIKWMALECIHYRKFTHQSDVWSYG 198 (303)
T ss_pred HhhcCeeccccccceeeecC--CCceEEccccccccccCcccccccC----CCccccccCCHHHhccCCCChHHHHHHHH
Confidence 99999999999999999975 7899999999998775433211000 00111234455555444455667899988
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 199 ~~l~el~ 205 (303)
T cd05110 199 VTIWELM 205 (303)
T ss_pred HHHHHHH
Confidence 7666554
No 304
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.24 E-value=6.7e-11 Score=123.39 Aligned_cols=190 Identities=16% Similarity=0.091 Sum_probs=115.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.|++|+...+..... . . ...-+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------------~-----~------~~~~~ 50 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--------------------------T-----S------KEVNA 50 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch--------------------------h-----h------HHHHH
Confidence 6799999999999998 689999998632211100 0 0 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
+.+|+..+.++.+ +++ .+...+... ....+++|||++|.+|.+..... ...+...+... .+...+..+|.
T Consensus 51 ~~~ei~~l~~l~h-----~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~ 124 (264)
T cd06653 51 LECEIQLLKNLRH-----DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHS 124 (264)
T ss_pred HHHHHHHHHHcCC-----CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4556555555432 222 222222221 23468999999999998864321 12333322221 23344678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.|++|+|++|+||+++. ++.+++.|||.+..+......... .....+...++.+++..........|++++...+
T Consensus 125 ~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 125 NMIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTG---IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred CCEecCCCCHHHEEEcC--CCCEEECccccccccccccccCcc---ccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 99999999999999985 789999999999876431110000 0001233445556665544456678999998776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 200 ~~l~ 203 (264)
T cd06653 200 VEML 203 (264)
T ss_pred HHHH
Confidence 6654
No 305
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.24 E-value=1.2e-10 Score=125.30 Aligned_cols=186 Identities=17% Similarity=0.132 Sum_probs=115.6
Q ss_pred cccccccceeEEEEEee---------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 375 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l---------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 375 (773)
.+.||.|++|.||+|+. ++..||+|+.+...... +
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~-- 60 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK----------------------------------D-- 60 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH----------------------------------H--
Confidence 37899999999999975 24579999875332110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh---------------c
Q 004115 376 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE---------------L 438 (773)
Q Consensus 376 ~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~---------------~ 438 (773)
.-++..|.+-+.++ .++++| .+++. ......+++|||++|++|.++..... .
T Consensus 61 -----~~~~~~E~~~l~~l----~~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ 129 (314)
T cd05099 61 -----LADLISEMELMKLI----GKHKNI--INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEE 129 (314)
T ss_pred -----HHHHHHHHHHHHhc----cCCCCe--eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCccc
Confidence 01233443333322 123332 23332 23455799999999999998754321 1
Q ss_pred CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHH
Q 004115 439 GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKV 516 (773)
Q Consensus 439 ~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i 516 (773)
......+...+ +...+..+|..|++|+|++|+||++++ ++.++++|||.++.+........ . ........++
T Consensus 130 ~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~--~--~~~~~~~~y~ 203 (314)
T cd05099 130 QLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE--DNVMKIADFGLARGVHDIDYYKK--T--SNGRLPVKWM 203 (314)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC--CCcEEEccccccccccccccccc--c--ccCCCCcccc
Confidence 12333322222 334468899999999999999999985 78999999999987754321110 0 0011223466
Q ss_pred HHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 517 LQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 517 ~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.++...-+......|.+++...+.+++
T Consensus 204 aPE~~~~~~~~~~~DiwslG~~l~el~ 230 (314)
T cd05099 204 APEALFDRVYTHQSDVWSFGILMWEIF 230 (314)
T ss_pred CHHHHccCCcCccchhhHHHHHHHHHH
Confidence 677666666677789999987766554
No 306
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.24 E-value=6.4e-11 Score=122.55 Aligned_cols=188 Identities=20% Similarity=0.180 Sum_probs=115.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|.||+|.. +|+.|+||+.+..... .+... +
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND----------------------------------PKTIK------E 45 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc----------------------------------hHHHH------H
Confidence 6899999999999998 6899999997533211 00111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+.++. ++++.-..-+.......++||||++|.+|.++..... ..+...+...+ +...+..+|..|
T Consensus 46 ~~~e~~~~~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 46 IADEMKVLELLK-----HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHhCC-----CCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHCC
Confidence 333333333332 1222111111223456799999999999999754321 12323222222 223367889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRRT 538 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~---~~~~~D~~~l~~~ 538 (773)
++|+|++|+||++++ ++.++++|||.+..+....... ...+.+ ..+...++.++....+. .....|++++...
T Consensus 120 i~H~dl~~~nil~~~--~~~~kl~d~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~i 195 (264)
T cd06626 120 IVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTM-GEEVQS-LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCV 195 (264)
T ss_pred cccCCCCHHHEEECC--CCCEEEcccccccccCCCCCcc-cccccC-CcCCcCccChhhccCCCCCCCCcccchHHHHHH
Confidence 999999999999986 8899999999998876543211 000001 12344455555554433 4566799998877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 196 l~~l~ 200 (264)
T cd06626 196 VLEMA 200 (264)
T ss_pred HHHHH
Confidence 66655
No 307
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.24 E-value=3e-11 Score=146.07 Aligned_cols=186 Identities=16% Similarity=0.182 Sum_probs=131.6
Q ss_pred ccccccceeEEEEEee---cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL---KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l---~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..||.|.||-||+|+. +|. .||||..++.-. .
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-----------------------------------------~ 736 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-----------------------------------------E 736 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC-----------------------------------------H
Confidence 5899999999999998 354 488887643321 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhh------hcCCCHHHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD------ELGVDRKRLGRYAVE 451 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~------~~~~d~~~la~~li~ 451 (773)
.++.||.+||.+|..|.+ ++ |..--|--. ....++++||++|+.|..+.+.. ...+...++....++
T Consensus 737 ~~~~~Fl~Ea~~m~~f~H-----pNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 737 QEVSDFLKEALLMSKFDH-----PNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred HHHHHHHHHHHHHhcCCC-----cceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 356799999999988743 33 233333333 67789999999999999876544 344566677766655
Q ss_pred HH--HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004115 452 SY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 529 (773)
Q Consensus 452 ~~--l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~ 529 (773)
.. ++++.+.+|||||+-.-|.|++. ...+++.||||++.+-..+. +..--.| .--...|.++...-|+.+..
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VKIaDFGlArDiy~~~y--yr~~~~a--~lPvkWm~PEsl~d~iFtsk 884 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDE--RRVVKIADFGLARDIYDKDY--YRKHGEA--MLPVKWMPPESLKDGIFTSK 884 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecc--cCcEEEcccchhHhhhhchh--eeccCcc--ccceecCCHHHHhhcccccc
Confidence 44 78899999999999999999986 68899999999995533221 1100000 01123455555555888889
Q ss_pred CChHHHHHHHHHHHH
Q 004115 530 GDTTAVRRTAQFFLN 544 (773)
Q Consensus 530 ~D~~~l~~~i~~~l~ 544 (773)
.|+++|...+-+++.
T Consensus 885 SDvWsFGVllWEifs 899 (1025)
T KOG1095|consen 885 SDVWSFGVLLWEIFS 899 (1025)
T ss_pred cchhhhHHHHHHHHh
Confidence 999999988776654
No 308
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.24 E-value=6.2e-11 Score=122.07 Aligned_cols=183 Identities=15% Similarity=0.130 Sum_probs=114.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|.||+|.. +|+.||+|+........ +-.. .
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------------------------~~~~------~ 45 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE----------------------------------KEKQ------Q 45 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH----------------------------------HHHH------H
Confidence 5799999999999998 68999999873221100 0001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee----ccCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHH--HHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYL 454 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~----e~st~~vLVMEyieG~~L~d~~~l~---~~~~d~~~la~~l--i~~~l 454 (773)
+..|...+.++. +++ +++++. ......+++|||++|++|.++.... ....+...+.... +...+
T Consensus 46 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l 118 (265)
T cd08217 46 LVSEVNILRELK-----HPN--IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL 118 (265)
T ss_pred HHHHHHHHHhcC-----CCc--cceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 233443343332 122 222222 1123458999999999998865322 1223433333332 23346
Q ss_pred HHHH-----hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004115 455 EQIL-----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 529 (773)
Q Consensus 455 ~qI~-----~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~ 529 (773)
..+| ..|++|+|+||+||+++. ++.++++|||++..+....... . . ..+...++.++...-+.....
T Consensus 119 ~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~--~---~-~~~~~~~~~pE~~~~~~~~~~ 190 (265)
T cd08217 119 YECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSFA--K---T-YVGTPYYMSPEQLNHMSYDEK 190 (265)
T ss_pred HHHhcCccccCcceecCCCHHHEEEec--CCCEEEecccccccccCCcccc--c---c-cccCCCccChhhhcCCCCCch
Confidence 7788 889999999999999985 7999999999999876543100 0 0 123444566666655555667
Q ss_pred CChHHHHHHHHHHH
Q 004115 530 GDTTAVRRTAQFFL 543 (773)
Q Consensus 530 ~D~~~l~~~i~~~l 543 (773)
.|.+++...+.+++
T Consensus 191 ~Dv~slG~il~~l~ 204 (265)
T cd08217 191 SDIWSLGCLIYELC 204 (265)
T ss_pred hHHHHHHHHHHHHH
Confidence 89999887766654
No 309
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.24 E-value=4.6e-11 Score=130.44 Aligned_cols=195 Identities=19% Similarity=0.227 Sum_probs=115.9
Q ss_pred HHhCCChhhhhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccc
Q 004115 290 EELGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRD 366 (773)
Q Consensus 290 ~elG~~~~eiF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d 366 (773)
++.++.+.++...|. .++||+|++|.||+|+. +|+.||||+.+......
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---------------------------- 55 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE---------------------------- 55 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc----------------------------
Confidence 355555556666664 48999999999999997 69999999874321100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhhhhhhcCCC
Q 004115 367 WVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVD 441 (773)
Q Consensus 367 ~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~~~~d 441 (773)
.+.. ++..|...+.++. +..-+.+..++.. .....++||||+++ .+.++. .....
T Consensus 56 ------~~~~------~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~ 115 (342)
T cd07879 56 ------IFAK------RAYRELTLLKHMQ----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM---GHPLS 115 (342)
T ss_pred ------cchh------HHHHHHHHHHhcC----CCCccchhheecccccCCCCceEEEEeccccc-CHHHHH---cCCCC
Confidence 0001 1223333333322 1111222222211 12345899999975 444432 12234
Q ss_pred HHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004115 442 RKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 519 (773)
Q Consensus 442 ~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~ 519 (773)
...+...+ +...+..+|..|++|+|++|+||+++. ++.++++|||++...+..... ...+..+++++
T Consensus 116 ~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~kL~dfg~~~~~~~~~~~---------~~~~~~y~aPE 184 (342)
T cd07879 116 EDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELKILDFGLARHADAEMTG---------YVVTRWYRAPE 184 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCCCCcCCCCCCCC---------ceeeecccChh
Confidence 33333332 223477899999999999999999986 899999999998876543211 11233345555
Q ss_pred HHHc-CCCCCCCChHHHHHHHHHHH
Q 004115 520 MVQM-GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 520 l~~l-G~~~~~~D~~~l~~~i~~~l 543 (773)
...- .......|++++...+.+++
T Consensus 185 ~~~~~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 185 VILNWMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred hhcCccccCchHHHHHHHHHHHHHH
Confidence 5433 23455679999887776654
No 310
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.24 E-value=6.2e-11 Score=126.34 Aligned_cols=181 Identities=18% Similarity=0.148 Sum_probs=114.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|.||+|.. +|+.|++|+....-.. ..-.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~------------------------------------------~~~~ 62 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP------------------------------------------KKEL 62 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccch------------------------------------------HHHH
Confidence 6899999999999987 6889999986211000 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|...+.++ . ++++.-..-+.......++||||++|++|.++... ...+...+...+ +-..+..+|..|
T Consensus 63 ~~~e~~~l~~l----~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~g 135 (293)
T cd06647 63 IINEILVMREN----K-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 135 (293)
T ss_pred HHHHHHHHhhc----C-CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 23343333222 1 23322111122234567999999999999887532 223333333222 223467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.++++|||++..+.+..... ....+.+.++.+++...+..+...|++++...+.+
T Consensus 136 i~H~dL~p~Nili~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 136 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred EeeccCCHHHEEEcC--CCCEEEccCcceeccccccccc------ccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 999999999999985 7899999999988776543211 01123344556666655666677899999877666
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 208 ll 209 (293)
T cd06647 208 MV 209 (293)
T ss_pred HH
Confidence 55
No 311
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.24 E-value=7.5e-11 Score=127.67 Aligned_cols=191 Identities=16% Similarity=0.105 Sum_probs=112.3
Q ss_pred ccccc--ceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAA--SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsa--SiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
-||.| +++.||+++. +|+.||||..+..... ++....+
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~----------------------------------~~~~~~~---- 46 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT----------------------------------NEMVTFL---- 46 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhcc----------------------------------HHHHHHH----
Confidence 47777 8899999998 6999999987322110 1111122
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
..|...+..+ ++++|.-..-+.......++||||++|+++.++.... ..+.+...+...+. ...+..+|.
T Consensus 47 --~~e~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 119 (327)
T cd08227 47 --QGELHVSKLF-----NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH 119 (327)
T ss_pred --HHHHHHHHhc-----CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2233333222 2233322222233456679999999999999875322 22344444433332 344788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChh-hHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN-IREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVR 536 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~-~r~~l~~l~~al~~~D~~~i~~~l~~lG--~~~~~~D~~~l~ 536 (773)
.|++|+|+||.||+++. ++.+++.|||....+... .......-+.....+...+++++...-+ ......|++++.
T Consensus 120 ~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (327)
T cd08227 120 MGYVHRSVKASHILISV--DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 197 (327)
T ss_pred CCEecCCCChhhEEEec--CCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHH
Confidence 99999999999999986 789999999865544221 1111000000001122335566665432 245668999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+.+++.
T Consensus 198 ~il~el~~ 205 (327)
T cd08227 198 ITACELAN 205 (327)
T ss_pred HHHHHHHH
Confidence 87766553
No 312
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.24 E-value=4.5e-11 Score=130.75 Aligned_cols=194 Identities=19% Similarity=0.205 Sum_probs=114.6
Q ss_pred hCCChhhhhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchH
Q 004115 292 LGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWV 368 (773)
Q Consensus 292 lG~~~~eiF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~ 368 (773)
++..+..+-+.|+ .++||+|++|.||+|.. +|+.||||+........
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------ 57 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI------------------------------ 57 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh------------------------------
Confidence 3333333434454 37899999999999997 69999999874321110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHH
Q 004115 369 AIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRK 443 (773)
Q Consensus 369 ~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~ 443 (773)
..+-.+.+|...+.++++ ..-+.+..++. +.....+++|+++ |..+.++.... ..+..
T Consensus 58 ----------~~~~~~~~Ei~~l~~l~h----~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~ 120 (345)
T cd07877 58 ----------IHAKRTYRELRLLKHMKH----ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDD 120 (345)
T ss_pred ----------HHHHHHHHHHHHHHHcCC----CcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHH
Confidence 001123345555555432 11122222221 1123468888887 66777764322 23333
Q ss_pred HHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 444 RLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 444 ~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
.+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||++......... ..+...+++++..
T Consensus 121 ~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~ 189 (345)
T cd07877 121 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTG---------YVATRWYRAPEIM 189 (345)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCEEEecccccccccccccc---------cccCCCccCHHHH
Confidence 332222 223478899999999999999999985 789999999998876443211 0112223444443
Q ss_pred Hc-CCCCCCCChHHHHHHHHHHH
Q 004115 522 QM-GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 522 ~l-G~~~~~~D~~~l~~~i~~~l 543 (773)
.. ....+..|.+++...+.+++
T Consensus 190 ~~~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 190 LNWMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred hCccCCCchhhHHHHHHHHHHHH
Confidence 22 23455679999887766654
No 313
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.24 E-value=4.6e-11 Score=142.73 Aligned_cols=144 Identities=21% Similarity=0.293 Sum_probs=92.4
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||.|++|.||+|+. +|+.||||+.+..-.. + .....
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----------------------------~-----~~~~~------ 49 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----------------------------N-----KNMVH------ 49 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----------------------------C-----HHHHH------
Confidence 36899999999999999 5999999997431100 0 00111
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.+..|...+..+. ++++.-...........+|||||++|++|.++..... .++...+...+ +...+..+|..
T Consensus 50 ~~~~E~~~l~~l~-----hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~ 123 (669)
T cd05610 50 QVQAERDALALSK-----SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRH 123 (669)
T ss_pred HHHHHHHHHHhcC-----CCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1233333333321 2332222222233456799999999999988753211 12322222222 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
|++|+|+||.|||++. ++.++|+|||+++....
T Consensus 124 gIiHrDLKP~NILl~~--~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 124 GIIHRDLKPDNMLISN--EGHIKLTDFGLSKVTLN 156 (669)
T ss_pred CEEeCCccHHHEEEcC--CCCEEEEeCCCCccccC
Confidence 9999999999999985 78999999999986543
No 314
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.24 E-value=6.9e-11 Score=124.06 Aligned_cols=181 Identities=13% Similarity=0.114 Sum_probs=109.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+.+...... . .-.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------~--------------~~~ 44 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG---------------------------T--------------PST 44 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEeccccccc---------------------------c--------------hHH
Confidence 6799999999999999 69999999885322110 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh--cCCCHHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAV--ESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~--~~~d~~~la~~li--~~~l~qI 457 (773)
+..|+..+.++. +++ +++++. ......+|||||++| .+.++..... ...+...+...+. ...+..+
T Consensus 45 ~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 116 (284)
T cd07836 45 AIREISLMKELK-----HEN--IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116 (284)
T ss_pred HHHHHHHHHhhc-----CCC--EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 234555555542 233 233332 334567999999997 6666432211 2234444333322 2346788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~ 536 (773)
|..|++|+|++|.||++++ ++.++++|||++..+....+.... ...+..++.++.... .......|++++.
T Consensus 117 H~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~~~------~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 188 (284)
T cd07836 117 HENRVLHRDLKPQNLLINK--RGELKLADFGLARAFGIPVNTFSN------EVVTLWYRAPDVLLGSRTYSTSIDIWSVG 188 (284)
T ss_pred HHCCeeeCCCCHHHEEECC--CCcEEEeecchhhhhcCCcccccc------ccccccccChHHhcCCCCCCcHHHHHHHH
Confidence 9999999999999999985 789999999998766433211000 011223444444322 2234456888887
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 189 ~~l~~l~ 195 (284)
T cd07836 189 CIMAEMI 195 (284)
T ss_pred HHHHHHH
Confidence 7666554
No 315
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.24 E-value=2.2e-10 Score=122.97 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=119.5
Q ss_pred hCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 292 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 292 lG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
+...++..|.. ...+|.|++|+||+|+. +|+.|+||..+...... .
T Consensus 9 ~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~- 56 (308)
T cd06634 9 FKDDPEKLFSD--LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-----------------------------N- 56 (308)
T ss_pred hcCCcHHHHHH--HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-----------------------------h-
Confidence 33445555543 35799999999999998 68899999774311000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 449 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l 449 (773)
+ ..-++..|.+.+..+. +...+.+...+ ......++||||+.| ++.++........+...+...+
T Consensus 57 ---~------~~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~ 121 (308)
T cd06634 57 ---E------KWQDIIKEVRFLQKLR----HPNTIQYRGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVT 121 (308)
T ss_pred ---H------HHHHHHHHHHHHHhCC----CCCcccEEEEE-EcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHH
Confidence 0 0113444554444442 21122222222 234567999999986 6666543333334544444433
Q ss_pred H--HHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cC
Q 004115 450 V--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MG 524 (773)
Q Consensus 450 i--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~---lG 524 (773)
. ...+..+|..|++|+|++|.||+++. ++.+++.|||++..+.+... ..+...+++++... -+
T Consensus 122 ~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~ 189 (308)
T cd06634 122 HGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANX----------FVGTPYWMAPEVILAMDEG 189 (308)
T ss_pred HHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCcccceeecCccc----------ccCCccccCHHHHhhcccC
Confidence 2 33468889999999999999999985 78999999999887765321 12334455555542 23
Q ss_pred CCCCCCChHHHHHHHHHHH
Q 004115 525 VLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 525 ~~~~~~D~~~l~~~i~~~l 543 (773)
......|++++...+.+++
T Consensus 190 ~~~~~~Di~slG~il~el~ 208 (308)
T cd06634 190 QYDGKVDVWSLGITCIELA 208 (308)
T ss_pred CCCcccchHHHHHHHHHHH
Confidence 4556789999987766554
No 316
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.23 E-value=3.8e-11 Score=126.99 Aligned_cols=184 Identities=14% Similarity=0.057 Sum_probs=106.7
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.||+|++|.||+|.. +|+.||||+.+....+. .+.
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------------~~~ 48 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-----------------------------------------VPF 48 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-----------------------------------------CcH
Confidence 46799999999999998 68999999874321110 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
.+.+|+..+..+. ++++.-..-+.......++||||++| .+.+.............+...+ +...+..+|..
T Consensus 49 ~~~~e~~~l~~l~-----h~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 122 (291)
T cd07870 49 TAIREASLLKGLK-----HANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ 122 (291)
T ss_pred HHHHHHHHHHhcC-----CCCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2334554444432 23332222222334457999999976 4443322212222333322222 23346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|+||.||+++. ++.++++|||++............ ...+..++.++...- .......|++++...+
T Consensus 123 ~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l 194 (291)
T cd07870 123 HILHRDLKPQNLLISY--LGELKLADFGLARAKSIPSQTYSS------EVVTLWYRPPDVLLGATDYSSALDIWGAGCIF 194 (291)
T ss_pred CcccCCCChHHEEEcC--CCcEEEeccccccccCCCCCCCCC------ccccccccCCceeecCCCCCcHHHHHHHHHHH
Confidence 9999999999999985 889999999988764332111000 011233344443321 1234456888888776
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 195 ~~l~ 198 (291)
T cd07870 195 IEML 198 (291)
T ss_pred HHHH
Confidence 6654
No 317
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.23 E-value=6.5e-11 Score=125.58 Aligned_cols=185 Identities=15% Similarity=0.084 Sum_probs=115.3
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..||.|++|.||+|.. ++..|++|.......
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------------------------------------------ 48 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL------------------------------------------ 48 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH------------------------------------------
Confidence 5799999999999985 245688887632110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------------CCCHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------------GVDRK 443 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------------~~d~~ 443 (773)
..+-+|.+|+..+.++. ++++.-..-+.......++||||++|.+|.++...... ..+..
T Consensus 49 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (291)
T cd05094 49 AARKDFQREAELLTNLQ-----HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 123 (291)
T ss_pred HHHHHHHHHHHHHhcCC-----CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHH
Confidence 11123555665555542 23332222233344567999999999999987532211 12223
Q ss_pred HHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 444 RLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 444 ~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
.+...+ +-..+..+|..|++|+|++|.||++++ ++.++++|||++..+......... ....+...+++++..
T Consensus 124 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~dfg~a~~~~~~~~~~~~----~~~~~~~~y~aPE~~ 197 (291)
T cd05094 124 QMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESI 197 (291)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEECCCCcccccCCCceeecC----CCCCcceeecChHHh
Confidence 332222 223367889999999999999999986 789999999998766443211110 011123445666665
Q ss_pred HcCCCCCCCChHHHHHHHHHHH
Q 004115 522 QMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 522 ~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.-....+..|++++...+.+++
T Consensus 198 ~~~~~~~~~Di~slG~il~el~ 219 (291)
T cd05094 198 MYRKFTTESDVWSFGVILWEIF 219 (291)
T ss_pred ccCCCCchhhHHHHHHHHHHHH
Confidence 5555566789999987776654
No 318
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.23 E-value=2.3e-10 Score=118.27 Aligned_cols=183 Identities=13% Similarity=0.113 Sum_probs=116.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|.||.++. +|+.||+|....... +. . ..-+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-----------------------------~~----~-------~~~~ 45 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-----------------------------SP----K-------EREE 45 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-----------------------------Ch----H-------HHHH
Confidence 6799999999999998 689999997621000 00 0 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~ 458 (773)
+.+|...+.++. ++++ ++++. +.....++||||++|++|.+...... ...+...+...+ +...+..+|
T Consensus 46 ~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 118 (256)
T cd08218 46 SRKEVAVLSNMK-----HPNI--VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH 118 (256)
T ss_pred HHHHHHHHHhCC-----CCCe--eeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344444444432 2332 23322 33456799999999999988653321 223444333332 223367789
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||+++. ++.+++.|||++..+....... ....+...++.++...-+......|++++...
T Consensus 119 ~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08218 119 DRKILHRDIKSQNIFLTK--DGTIKLGDFGIARVLNSTVELA------RTCIGTPYYLSPEICENRPYNNKSDIWALGCV 190 (256)
T ss_pred hCCEecCCCCHHHEEEcC--CCCEEEeeccceeecCcchhhh------hhccCCccccCHHHhCCCCCCCccchhHHHHH
Confidence 999999999999999985 7899999999998775533211 01123444566666655556667899999877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 191 ~~~l~ 195 (256)
T cd08218 191 LYEMC 195 (256)
T ss_pred HHHHH
Confidence 66554
No 319
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.23 E-value=4.2e-11 Score=127.89 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=81.9
Q ss_pred CccccceeeeccCC------CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceE
Q 004115 402 DYVKVPTIFWEYTT------PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIA 473 (773)
Q Consensus 402 ~~V~vP~v~~e~st------~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNIL 473 (773)
.+..+|..+..... ..+++||++.+ .+.+..... .......+...+ +...+..+|..|++|||+||.||+
T Consensus 81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34556666642211 23778887754 333332211 112222222222 233477899999999999999999
Q ss_pred EeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 474 VDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 474 V~~~~~g~I~LlDFGlv~~Ls~~~r~~-l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+++ ++.++++|||++..+....... ...-......+.+.++++....-...+...|++++.-.+.+++
T Consensus 159 l~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~ 227 (294)
T PHA02882 159 VDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA 227 (294)
T ss_pred EcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 975 7899999999998764322110 0000011123556667777666555667789999987766654
No 320
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.23 E-value=1.1e-10 Score=119.87 Aligned_cols=181 Identities=18% Similarity=0.163 Sum_probs=112.7
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||.|++|+||+|.. +|+.|++|+.+......- .....+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------------~~~~~~~ 41 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR---------------------------------------KEVEHTL 41 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch---------------------------------------HHHHHHH
Confidence 68999999999998 589999998754321110 0011233
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
.|...+.++. ++ .++.++. +.....+++|||++|.+|.++..... ..+...+...+ +...+..+|..|
T Consensus 42 ~e~~~l~~l~-----h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 42 TERNILSRIN-----HP--FIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHcC-----CC--cHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3333333332 12 1222222 22345699999999999988653221 23444433332 334467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|+|++|.||+++. ++.++++|||++......... .....+...++.++...-....+..|.+++...+.+
T Consensus 114 ~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~ 185 (250)
T cd05123 114 IIYRDLKPENILLDA--DGHIKLTDFGLAKELSSEGSR------TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYE 185 (250)
T ss_pred ceecCCCcceEEEcC--CCcEEEeecCcceecccCCCc------ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHH
Confidence 999999999999986 789999999999877553210 011123444555555544445667899988876665
Q ss_pred HH
Q 004115 542 FL 543 (773)
Q Consensus 542 ~l 543 (773)
++
T Consensus 186 l~ 187 (250)
T cd05123 186 ML 187 (250)
T ss_pred HH
Confidence 54
No 321
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.23 E-value=5.1e-11 Score=140.11 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=115.7
Q ss_pred ccccccceeEEEEEee-c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~-G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-||.|+||+||.|.+ . |.+||+|.+.-. . ++--+.+.+|++
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-d-----------------------------------e~~L~~v~~EI~ 86 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-D-----------------------------------EEALNAVKREID 86 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecC-C-----------------------------------HHHHHHHHHHHH
Confidence 5799999999999999 4 499999977322 1 011134455666
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li~~~--l~qI~~~ 460 (773)
+....++.+.+-..+.....-..-.. -.-+..|-||||.|+.|-|+..- .+.++...++...+.+.+ +..+|..
T Consensus 87 ~MK~L~gh~nIV~yidss~~~~~~~~---~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~ 163 (738)
T KOG1989|consen 87 IMKLLSGHKNIVSYIDSSAINRSSNN---GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL 163 (738)
T ss_pred HHHHhcCCCceeeEeccccccccCCC---ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC
Confidence 65444321111111110000000000 00124789999999999886542 233466677766664443 6678877
Q ss_pred C--CccCCCCCCceEEeccCCCcEEEEeecceeccC--hhhHHHHHHHHHHHhh-cC----HHHHHHHHHHcCCCCCCCC
Q 004115 461 G--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS--PNIREGLLEAFYGIYE-KD----ADKVLQAMVQMGVLVPTGD 531 (773)
Q Consensus 461 G--ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls--~~~r~~l~~l~~al~~-~D----~~~i~~~l~~lG~~~~~~D 531 (773)
. ++|||||-+|||+.. +|..+|||||.+.... ++....+.-+=.-+.. -. ..+|++.+..+++ .+..|
T Consensus 164 ~pPiIHRDLKiENvLls~--~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI-~eKsD 240 (738)
T KOG1989|consen 164 KPPIIHRDLKIENVLLSA--DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI-GEKSD 240 (738)
T ss_pred CCccchhhhhhhheEEcC--CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC-cchhH
Confidence 6 999999999999986 8999999999887532 2211111111011111 11 2345555554554 66789
Q ss_pred hHHHHHHHHHH
Q 004115 532 TTAVRRTAQFF 542 (773)
Q Consensus 532 ~~~l~~~i~~~ 542 (773)
+|+|...++.+
T Consensus 241 IWALGclLYkL 251 (738)
T KOG1989|consen 241 IWALGCLLYKL 251 (738)
T ss_pred HHHHHHHHHHH
Confidence 99999877765
No 322
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.23 E-value=8.5e-11 Score=124.29 Aligned_cols=186 Identities=16% Similarity=0.142 Sum_probs=113.8
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|... ...||+|+.+.+....
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~---------------------------------------- 57 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK---------------------------------------- 57 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH----------------------------------------
Confidence 68999999999999972 2679999875432111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDR 442 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d~ 442 (773)
...++.+|...+.++. +++++ .+..++ ......+++|||++|++|.++..... ...+.
T Consensus 58 -~~~~~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 131 (293)
T cd05053 58 -DLSDLVSEMEMMKMIG----KHKNIINLLGVC-TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQ 131 (293)
T ss_pred -HHHHHHHHHHHHHhhc----CCCCeeeEEEEE-cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCH
Confidence 0112444544444432 12332 222322 33456799999999999988753211 11223
Q ss_pred HHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004115 443 KRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 520 (773)
Q Consensus 443 ~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l 520 (773)
..+...+ +...+..+|..|++|+|++|.||++++ ++.++++|||.+..+......... ........+++++.
T Consensus 132 ~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~ 205 (293)
T cd05053 132 KDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE--DHVMKIADFGLARDIHHIDYYRKT----TNGRLPVKWMAPEA 205 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC--CCeEEeCccccccccccccceecc----CCCCCCccccCHHH
Confidence 3332222 223468889999999999999999986 889999999999876543210000 00011123455555
Q ss_pred HHcCCCCCCCChHHHHHHHHHHH
Q 004115 521 VQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 521 ~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
..-+......|++++...+.+++
T Consensus 206 ~~~~~~~~~~Di~slG~il~el~ 228 (293)
T cd05053 206 LFDRVYTHQSDVWSFGVLLWEIF 228 (293)
T ss_pred hccCCcCcccceeehhhHHHHHh
Confidence 55555566789999987766544
No 323
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.23 E-value=7.8e-11 Score=124.51 Aligned_cols=186 Identities=18% Similarity=0.191 Sum_probs=108.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+...... + . .-+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~---------------------------~-------~------~~~ 46 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE---------------------------G-------I------PPT 46 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc---------------------------C-------C------chH
Confidence 5699999999999998 68999999874321100 0 0 012
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCC----CeEEEEeecCCCChhhhhhhhh----cCCCHHHHHHHH--HHH
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTT----PQILTMEYVPGIKINRIQSLDE----LGVDRKRLGRYA--VES 452 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st----~~vLVMEyieG~~L~d~~~l~~----~~~d~~~la~~l--i~~ 452 (773)
+.+|...+.++. ++++ +.+..++..... ..+++|||++| .+.++..... ...+...+...+ +..
T Consensus 47 ~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 121 (295)
T cd07837 47 ALREISLLQMLS----ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121 (295)
T ss_pred HHHHHHHHHHcc----CCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHH
Confidence 334444444442 2222 222222221111 25899999998 6666532211 123334333332 223
Q ss_pred HHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCC
Q 004115 453 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGD 531 (773)
Q Consensus 453 ~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D 531 (773)
.+..+|..|++|+|++|+||+++. .++.+++.|||++..+.......... ...+.+++++... ........|
T Consensus 122 ~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~dfg~~~~~~~~~~~~~~~------~~~~~~~aPE~~~~~~~~~~~~D 194 (295)
T cd07837 122 GVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIADLGLGRAFSIPVKSYTHE------IVTLWYRAPEVLLGSTHYSTPVD 194 (295)
T ss_pred HHHHHHHCCeeecCCChHHEEEec-CCCeEEEeecccceecCCCccccCCc------ccccCCCChHHhhCCCCCCchHH
Confidence 477899999999999999999984 36899999999988764332111000 1122344444432 223456679
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
.+++...+++++
T Consensus 195 i~slG~~l~~l~ 206 (295)
T cd07837 195 IWSVGCIFAEMS 206 (295)
T ss_pred HHHHHHHHHHHH
Confidence 999887776654
No 324
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.23 E-value=7e-11 Score=126.38 Aligned_cols=189 Identities=13% Similarity=0.115 Sum_probs=109.6
Q ss_pred CcccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+...||.|++|.||+|+. ++..||+|..++...
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~------------------------------------------- 41 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI------------------------------------------- 41 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-------------------------------------------
Confidence 345799999999999997 257899997642110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeec-cCCCeEEEEeecCCCChhhhhhhhh--------cCCCHHHHHHHH-
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-YTTPQILTMEYVPGIKINRIQSLDE--------LGVDRKRLGRYA- 449 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-~st~~vLVMEyieG~~L~d~~~l~~--------~~~d~~~la~~l- 449 (773)
...+.+|++.+.++. +..-+.+..++.. .....+++|||++| .+.++..... ..+....+...+
T Consensus 42 -~~~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 115 (317)
T cd07867 42 -SMSACREIALLRELK----HPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLY 115 (317)
T ss_pred -cHHHHHHHHHHHhCC----CCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHH
Confidence 001234444444332 2222333333322 22345899999987 4444322110 112222222222
Q ss_pred -HHHHHHHHHhCCCccCCCCCCceEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CC
Q 004115 450 -VESYLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GV 525 (773)
Q Consensus 450 -i~~~l~qI~~~GffHaDpHPGNILV~~--~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~ 525 (773)
+...+..+|..|++|+|+||.||++.. ..++.++|+|||++..+....... .. ..-..+...+++++...- ..
T Consensus 116 qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-~~--~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-AD--LDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-cc--cCcceecccccCcHHhcCCCc
Confidence 233477899999999999999999942 135789999999998775432110 00 000123444566665533 33
Q ss_pred CCCCCChHHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l~ 544 (773)
.....|++++...+.+++.
T Consensus 193 ~~~~~DiwSlG~il~el~t 211 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred cCcHHHHHhHHHHHHHHHh
Confidence 4566799999887776653
No 325
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=2.8e-11 Score=131.36 Aligned_cols=183 Identities=19% Similarity=0.222 Sum_probs=118.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|.+|.|-+|+. .|+.||||..|.+.-+. ..|++.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-------------------------eqDlvh-------------- 99 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-------------------------EQDLVH-------------- 99 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-------------------------HHHHHH--------------
Confidence 5799999999999998 69999999775442211 012221
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l---i~~~l~qI~~~ 460 (773)
.++|.+-|..+ .+..-|.+-.|+ +-..+.||||||..|+.|.|+..-... +. ++-++.. +-+.++.+|.+
T Consensus 100 IRREIeIMSsL----NHPhII~IyEVF-ENkdKIvivMEYaS~GeLYDYiSer~~-Ls-ErEaRhfFRQIvSAVhYCHkn 172 (668)
T KOG0611|consen 100 IRREIEIMSSL----NHPHIIQIYEVF-ENKDKIVIVMEYASGGELYDYISERGS-LS-EREARHFFRQIVSAVHYCHKN 172 (668)
T ss_pred HHHHHHHHhhc----CCCceeehhhhh-cCCceEEEEEEecCCccHHHHHHHhcc-cc-HHHHHHHHHHHHHHHHHHhhc
Confidence 23333333322 122223444555 446778999999999999998643221 11 1112222 22345667899
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
+++|||+|-.|||++. ++.+++.|||+...+.+ ..|.+.|+ +.+-++.+++..- -+..|.+|-+++...+
T Consensus 173 rVvHRDLKLENILLD~--N~NiKIADFGLSNly~~---~kfLqTFC----GSPLYASPEIvNG~PY~GPEVDsWsLGvLL 243 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQ--NNNIKIADFGLSNLYAD---KKFLQTFC----GSPLYASPEIVNGTPYKGPEVDSWSLGVLL 243 (668)
T ss_pred cceecccchhheeecC--CCCeeeeccchhhhhcc---ccHHHHhc----CCcccCCccccCCCCCCCCccchhhHHHHH
Confidence 9999999999999986 78999999999988754 34454444 4555555555542 2345677888888766
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
+-++
T Consensus 244 YtLV 247 (668)
T KOG0611|consen 244 YTLV 247 (668)
T ss_pred HHHh
Confidence 6554
No 326
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.22 E-value=1.2e-10 Score=123.22 Aligned_cols=185 Identities=14% Similarity=0.108 Sum_probs=110.9
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+.||.|++|.||+|+.. +..|++|+.+......
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~---------------------------------------- 45 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS---------------------------------------- 45 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH----------------------------------------
Confidence 56899999999999872 2578898774322110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh--------------------
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------------------- 437 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------------------- 437 (773)
..-++.+|...+..+. ++++ .+...+ ......+++|||++|++|.++.....
T Consensus 46 -~~~~~~~E~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 118 (290)
T cd05045 46 -ELRDLLSEFNLLKQVN-----HPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118 (290)
T ss_pred -HHHHHHHHHHHHhhCC-----CCCEeeEEEEE-ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccC
Confidence 0113445544444332 2332 222222 33466799999999999988643210
Q ss_pred ---cCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcC
Q 004115 438 ---LGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKD 512 (773)
Q Consensus 438 ---~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D 512 (773)
...+...+...+ +...+..+|..|++|+|++|.||++++ ++.++++|||++..+...... ... ......
T Consensus 119 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~--~~~~kl~dfg~~~~~~~~~~~--~~~--~~~~~~ 192 (290)
T cd05045 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAE--GRKMKISDFGLSRDVYEEDSY--VKR--SKGRIP 192 (290)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcC--CCcEEeccccccccccCccch--hcc--cCCCCC
Confidence 012222222222 223478899999999999999999986 789999999998876433211 000 001112
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 513 ADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 513 ~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
..++.++...-.......|++++...+.+++
T Consensus 193 ~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 223 (290)
T cd05045 193 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223 (290)
T ss_pred ccccCHHHHccCCcchHhHHHHHHHHHHHHH
Confidence 2344555444444556678888887666554
No 327
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.22 E-value=5.2e-11 Score=125.03 Aligned_cols=185 Identities=19% Similarity=0.215 Sum_probs=114.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.|+||+.++..... +... .
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~----------------------------------~~~~------~ 46 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE----------------------------------DVKK------T 46 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc----------------------------------cchh------H
Confidence 5799999999999998 58999999874322100 0111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+.+|.+.+.++. +..-+.+..++. .....+++|||++|..+..+... ..+.+...+.... +...+..+|..|
T Consensus 47 ~~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 47 ALREVKVLRQLR----HENIVNLKEAFR-RKGRLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred HHHHHHHHHhcC----CCCeeehhheEE-ECCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 344444444443 111222333332 23457999999999777654322 2234444443332 333478889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.+++.|||++..+.......... ..+...++++++.... ......|.+++...+.
T Consensus 121 i~H~dl~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~~~~~-----~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~ 193 (288)
T cd07833 121 IIHRDIKPENILVSE--SGVLKLCDFGFARALRARPASPLTD-----YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMA 193 (288)
T ss_pred eecCCCCHHHeEECC--CCCEEEEeeecccccCCCccccccC-----cccccCCcCCchhcCCCCcCchhhHHHHHHHHH
Confidence 999999999999986 8999999999998876544311110 1122334445544444 4455678898887666
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 194 ~l~ 196 (288)
T cd07833 194 ELL 196 (288)
T ss_pred HHH
Confidence 554
No 328
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.22 E-value=4.8e-11 Score=124.19 Aligned_cols=120 Identities=13% Similarity=0.042 Sum_probs=79.0
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCC------CcEEEE
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNG------GRLIFY 485 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~------g~I~Ll 485 (773)
....++||||++|++|.++........+.......+ +...+..+|..|++|+|++|.||++++.+. +.+++.
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 356799999999999988754333334443333222 333478889999999999999999975111 137999
Q ss_pred eecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHH
Q 004115 486 DFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 486 DFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~~~l 543 (773)
|||......+... ..++..++.++...- +......|++++...+.+++
T Consensus 151 d~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 199 (258)
T cd05078 151 DPGISITVLPKEI----------LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199 (258)
T ss_pred ccccccccCCchh----------ccccCCccCchhccCCCCCCchhhHHHHHHHHHHHH
Confidence 9998876544211 123444555655543 33456689999987766654
No 329
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.22 E-value=6.1e-11 Score=124.58 Aligned_cols=184 Identities=19% Similarity=0.222 Sum_probs=109.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|+||+|.. +|+.||+|+........ ...+ +
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~------~ 46 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK----------------------------------MVKK------I 46 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc----------------------------------hhhH------H
Confidence 6799999999999999 48999999763211100 0011 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~G 461 (773)
+.+|.+-+.++. +..-+.+..++ ......++||||++|..+.++... ..+.+...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 47 AMREIRMLKQLR----HENLVNLIEVF-RRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred HHHHHHHHHhcC----CcchhhHHHhc-ccCCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 223332222221 11111122222 223457999999999988876432 223444444443322 3467889999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.++++|||++..+...... ... ..+...+++++.... .......|++++...+.
T Consensus 121 i~h~~l~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~-~~~-----~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 192 (286)
T cd07846 121 IIHRDIKPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YTD-----YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVT 192 (286)
T ss_pred ccccCCCHHHEEECC--CCcEEEEeeeeeeeccCCccc-cCc-----ccceeeccCcHHhccccccCchHhHHHHHHHHH
Confidence 999999999999986 889999999999877554321 100 012223334443322 22344578998887776
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 193 el~ 195 (286)
T cd07846 193 EML 195 (286)
T ss_pred HHH
Confidence 655
No 330
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.22 E-value=1.5e-10 Score=120.95 Aligned_cols=191 Identities=14% Similarity=0.083 Sum_probs=117.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+.+|.|++|.||+|.. +|+.|++|+.+...... . .. ..-.
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~-----------------------------~--~~------~~~~ 49 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP-----------------------------E--TS------KEVS 49 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc-----------------------------h--hH------HHHH
Confidence 36899999999999998 58999999874322110 0 00 0111
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.+.+|...+.++. ++++ .+...+.+. ....+++|||++|.+|.++.... ...+.......+ +...+..+|
T Consensus 50 ~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 50 ALECEIQLLKNLQ-----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred HHHHHHHHHHHcC-----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 3455655555543 2332 222222221 23468999999999998865321 123333332222 334467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||+++. ++.+++.|||++..+......... .....+...+++++.......+...|++++...
T Consensus 124 ~~~i~H~~l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 198 (266)
T cd06651 124 SNMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICMSGTG---IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCT 198 (266)
T ss_pred hCCeeeCCCCHHHEEECC--CCCEEEccCCCccccccccccCCc---cccCCccccccCHHHhCCCCCCchhhhHHHHHH
Confidence 999999999999999975 789999999998866432111000 001123445566666655545567899998877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 199 ~~el~ 203 (266)
T cd06651 199 VVEML 203 (266)
T ss_pred HHHHH
Confidence 66655
No 331
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.22 E-value=1.6e-10 Score=120.76 Aligned_cols=184 Identities=17% Similarity=0.159 Sum_probs=114.6
Q ss_pred ccccccceeEEEEEee-c--C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~--G--~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|.||+|++ + + ..|+||..+...... .
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------------~------ 50 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPS-----------------------------------V------ 50 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHH-----------------------------------H------
Confidence 6799999999999997 2 2 368889764322100 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.-.|.+|+..+.++. +..-+.+..++ .....+++|||++|++|.++........+...+...+ +...+..+|
T Consensus 51 ~~~~~~e~~~l~~~~----h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH 124 (270)
T cd05056 51 REKFLQEAYIMRQFD----HPHIVKLIGVI--TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE 124 (270)
T ss_pred HHHHHHHHHHHHhCC----CCchhceeEEE--cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 113445555444442 21112222222 2355789999999999998754333233443333322 334467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||+++. ++.++++|||.+..+..... +.. ........+++++...........|++++...
T Consensus 125 ~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~--~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 197 (270)
T cd05056 125 SKRFVHRDIAARNVLVSS--PDCVKLGDFGLSRYLEDESY--YKA---SKGKLPIKWMAPESINFRRFTSASDVWMFGVC 197 (270)
T ss_pred hCCeeccccChheEEEec--CCCeEEccCceeeecccccc--eec---CCCCccccccChhhhccCCCCchhhhHHHHHH
Confidence 999999999999999986 78999999999987755421 000 01112234556666555555667899998876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 198 l~el~ 202 (270)
T cd05056 198 MWEIL 202 (270)
T ss_pred HHHHH
Confidence 66544
No 332
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.21 E-value=9.1e-11 Score=124.24 Aligned_cols=182 Identities=16% Similarity=0.104 Sum_probs=113.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.|+||..+..... +.+ ..+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~------~~~ 50 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK----------------------------------EGF------PIT 50 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc----------------------------------ccc------hhh
Confidence 6899999999999999 5899999987432110 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~s--t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI 457 (773)
+.+|...+.++. ++++ +.++. ... ...+++|||++| +|.++........+...+...+. ...+..+
T Consensus 51 ~~~e~~~l~~l~-----h~ni--~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 122 (293)
T cd07843 51 SLREINILLKLQ-----HPNI--VTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHL 122 (293)
T ss_pred HHHHHHHHHhcC-----CCCE--EEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 334544444442 2332 22221 122 668999999987 77765433222345444444332 3347889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~ 536 (773)
|..|++|+|++|+||+++. ++.++++|||.+..+....... . ....+..+++++.... .......|.+++.
T Consensus 123 H~~~i~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~-~-----~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 194 (293)
T cd07843 123 HDNWILHRDLKTSNLLLNN--RGILKICDFGLAREYGSPLKPY-T-----QLVVTLWYRAPELLLGAKEYSTAIDMWSVG 194 (293)
T ss_pred HHCCeeeccCCHHHEEECC--CCcEEEeecCceeeccCCcccc-c-----cccccccccCchhhcCCccccchhhHHHHH
Confidence 9999999999999999985 7899999999998775542111 0 0112333444554432 2234567899888
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 195 ~~l~~l~ 201 (293)
T cd07843 195 CIFAELL 201 (293)
T ss_pred HHHHHHH
Confidence 7666554
No 333
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.21 E-value=8.7e-11 Score=128.30 Aligned_cols=199 Identities=21% Similarity=0.212 Sum_probs=115.6
Q ss_pred HhCCChhhhhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004115 291 ELGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 367 (773)
Q Consensus 291 elG~~~~eiF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~ 367 (773)
+.+....++...|. ..+||+|++|+||+|+. +|+.||||+........
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------- 55 (343)
T cd07851 5 ELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA----------------------------- 55 (343)
T ss_pred hhccceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-----------------------------
Confidence 34444444555554 37899999999999999 58999999874321110
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHH
Q 004115 368 VAIYDECASVLYQEIDYTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL 445 (773)
Q Consensus 368 ~~i~~E~~~~l~~ElDf~~EA--~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~l 445 (773)
+....+.+|++..... .|+..+...+.. .-........++||||+ |.+|.++... ..++...+
T Consensus 56 -----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~ 120 (343)
T cd07851 56 -----IHAKRTYRELRLLKHMDHENVIGLLDVFTP-------ASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHI 120 (343)
T ss_pred -----hHHHHHHHHHHHHHhccCCCHHHHHHHhhc-------cccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHH
Confidence 0001111222222111 122222221111 00001223479999999 5578776432 23444433
Q ss_pred HHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004115 446 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 523 (773)
Q Consensus 446 a~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l 523 (773)
...+ +...+..+|..|++|+|++|.||++++ ++.++|+|||++..+....... .....+++++....
T Consensus 121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~~~---------~~~~~y~aPE~~~~ 189 (343)
T cd07851 121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDFGLARHTDDEMTGY---------VATRWYRAPEIMLN 189 (343)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEccccccccccccccCC---------cccccccCHHHHhC
Confidence 3332 223467899999999999999999986 8899999999998775432111 12233444554432
Q ss_pred -CCCCCCCChHHHHHHHHHHHH
Q 004115 524 -GVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 524 -G~~~~~~D~~~l~~~i~~~l~ 544 (773)
.......|++++...+.+++.
T Consensus 190 ~~~~~~~~DvwslGv~l~ellt 211 (343)
T cd07851 190 WMHYNQTVDIWSVGCIMAELLT 211 (343)
T ss_pred CCCCCchHhHHHHHHHHHHHHh
Confidence 234456799999877766553
No 334
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.21 E-value=2.4e-11 Score=135.65 Aligned_cols=185 Identities=14% Similarity=0.145 Sum_probs=131.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+-+|.|+||.++..++ ++..+|+|..+=. ...+..++...+|++
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~----------------------------------~~t~~~r~~A~~E~~ 55 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLE----------------------------------KLTEPERRSAIQEMD 55 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecc----------------------------------ccCchhhHHHHHHHH
Confidence 5799999999988877 6789999977210 000111222333333
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCC-eEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHH--HHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTP-QILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY--LEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~-~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~--l~qI~~ 459 (773)
+ +.+ ..++.-|..+..+.+ .+. .++||+|++|+++.+...-.+ ..++.+++...+++.. +..+|+
T Consensus 56 l------is~----~~hP~iv~y~ds~~~-~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~ 124 (426)
T KOG0589|consen 56 L------LSK----LLHPNIVEYKDSFEE-DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE 124 (426)
T ss_pred H------HHh----ccCCCeeeeccchhc-CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh
Confidence 3 222 333333445554443 444 899999999999999654333 4467778877776655 678999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.+++|||+|+.|||++. ++.|+|-|||+++.+.++. .++ .-+-+++.++.+++.+---.....|++++.-.+
T Consensus 125 ~~iLHRDlK~~Nifltk--~~~VkLgDfGlaK~l~~~~--~~a----~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~ 196 (426)
T KOG0589|consen 125 NRVLHRDLKCANIFLTK--DKKVKLGDFGLAKILNPED--SLA----STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL 196 (426)
T ss_pred hhhhcccchhhhhhccc--cCceeecchhhhhhcCCch--hhh----heecCCCcccCHHHhCCCCCCccCcchhhcchH
Confidence 99999999999999986 8899999999999998875 222 334579999999998754445567999999887
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
+++.
T Consensus 197 yEm~ 200 (426)
T KOG0589|consen 197 YEMC 200 (426)
T ss_pred HHHH
Confidence 7664
No 335
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.21 E-value=1.7e-10 Score=118.71 Aligned_cols=182 Identities=13% Similarity=0.078 Sum_probs=114.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.++.|++|.||++.. +|+.++||......... . ...+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~------~~~~ 45 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ----------------------------------K------ERED 45 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccH----------------------------------H------HHHH
Confidence 5799999999999988 68999999874321100 0 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~---~~~~d~~~la~~l--i~~~l~qI 457 (773)
+..|.+.+..+. ++++ .+...+ ......++||||++|.+|.++.... ....+...+...+ +...+..+
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 119 (256)
T cd08530 46 AVNEIRILASVN-----HPNIISYKEAF-LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL 119 (256)
T ss_pred HHHHHHHHHhCC-----CCCchhhhhhh-ccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 223333333221 1221 111222 2235679999999999998864321 1223444433332 23346788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
|..|++|+|++|.||++++ ++.+++.|||++..+...... ...+++.++.++........+..|++++..
T Consensus 120 h~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~ 189 (256)
T cd08530 120 HEQKILHRDLKSANILLVA--NDLVKIGDLGISKVLKKNMAK--------TQIGTPHYMAPEVWKGRPYSYKSDIWSLGC 189 (256)
T ss_pred hhCCcccCCCCcceEEEec--CCcEEEeeccchhhhccCCcc--------cccCCccccCHHHHCCCCCCchhhHHHHHH
Confidence 9999999999999999986 789999999998877654111 112344556666665555556789999887
Q ss_pred HHHHHH
Q 004115 538 TAQFFL 543 (773)
Q Consensus 538 ~i~~~l 543 (773)
.+.+++
T Consensus 190 ~~~~l~ 195 (256)
T cd08530 190 LLYEMA 195 (256)
T ss_pred HHHHHH
Confidence 766554
No 336
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.21 E-value=6.3e-11 Score=123.91 Aligned_cols=186 Identities=18% Similarity=0.192 Sum_probs=112.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|+|++|+||+|+. +|+.||||+.+...... ++ ..+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~----------------------------------~~------~~~ 44 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE----------------------------------GF------PIT 44 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc----------------------------------cc------hHH
Confidence 5689999999999998 58999999985432100 00 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+..|+..+.++. +..-+.+..++... ....++||||+++ ++.++........+...+...+ +...+..+|..
T Consensus 45 ~~~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~ 119 (287)
T cd07840 45 AIREIKLLQKLR----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN 119 (287)
T ss_pred HHHHHHHHHhcc----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445555554443 11122233333222 2568999999987 6766543222234444333332 22346788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~-~lG~~~~~~D~~~l~~~i 539 (773)
|++|+|++|.||++++ ++.++++|||++..+........... ..+..++.++.. ......+..|++++...+
T Consensus 120 ~~~h~dl~p~nil~~~--~~~~~l~d~g~~~~~~~~~~~~~~~~-----~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l 192 (287)
T cd07840 120 GILHRDIKGSNILINN--DGVLKLADFGLARPYTKRNSADYTNR-----VITLWYRPPELLLGATRYGPEVDMWSVGCIL 192 (287)
T ss_pred CceeccCcHHHeEEcC--CCCEEEccccceeeccCCCccccccc-----ccccccCCceeeEccccCChHHHHHHHHHHH
Confidence 9999999999999986 88999999999998765432111100 112223333322 112234567888887766
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
.+++
T Consensus 193 ~el~ 196 (287)
T cd07840 193 AELF 196 (287)
T ss_pred HHHH
Confidence 6554
No 337
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.20 E-value=2.4e-10 Score=114.60 Aligned_cols=185 Identities=20% Similarity=0.167 Sum_probs=113.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++|++|++|+||+|.. +++.|+||+.+..... ...-+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------------~~~~~ 43 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-----------------------------------------KQREE 43 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-----------------------------------------HHHHH
Confidence 6899999999999999 3799999988543211 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~G 461 (773)
+.+|+..+.++. ++++.-..-+.......+++|||++|.+|.++........+...+..... ...+..+|..|
T Consensus 44 ~~~e~~~~~~~~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 118 (225)
T smart00221 44 FLREIRILKKLK-----HPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG 118 (225)
T ss_pred HHHHHHHHHhCC-----CCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 445555554441 22222222222334678999999999999887543221134333333222 23367789999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~-~lG~~~~~~D~~~l~~~i~ 540 (773)
++|+|++|.||++++ ++.++++|||....+....-.... ........+.+++. ......+..|.+++...+.
T Consensus 119 i~h~di~~~ni~v~~--~~~~~l~d~g~~~~~~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~ 191 (225)
T smart00221 119 IVHRDLKPENILLGM--DGLVKLADFGLARFIHRDLAALLK-----TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY 191 (225)
T ss_pred eecCCCCHHHEEEcC--CCCEEEeeCceeeEecCccccccc-----ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence 999999999999986 689999999999887654300000 01112223334443 3333344678888776555
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 192 ~l~ 194 (225)
T smart00221 192 ELL 194 (225)
T ss_pred HHH
Confidence 443
No 338
>PRK10345 hypothetical protein; Provisional
Probab=99.20 E-value=1.3e-10 Score=119.74 Aligned_cols=142 Identities=10% Similarity=0.110 Sum_probs=90.1
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.++||+|++|.||.-..++.. +||+.+++-... .+ ++
T Consensus 7 ~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~------------------------------------~~------~~ 43 (210)
T PRK10345 7 QSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGG------------------------------------DK------EI 43 (210)
T ss_pred cceecCCCceEEEECCCCcCe-EEEEEeccccch------------------------------------HH------HH
Confidence 478999999999962224555 699886532100 01 24
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCe---E---EEEee--cCCCChhhhhhhhhcCCCH-HHHHHHHHHHHHH
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQ---I---LTMEY--VPGIKINRIQSLDELGVDR-KRLGRYAVESYLE 455 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~---v---LVMEy--ieG~~L~d~~~l~~~~~d~-~~la~~li~~~l~ 455 (773)
.+|.+.+..+.+.-.+ +-.++++|..+.+.. + +|||| ++|++|.++.... ..+. ......++..+++
T Consensus 44 ~rEi~~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~~~~~~~~L~~l~~ 119 (210)
T PRK10345 44 RRELKYYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEEDVAQLRQLLKKLKR 119 (210)
T ss_pred HHHHHHHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHhHHHHHHHHHHHHH
Confidence 4555555555432222 334677776555542 2 78999 5579999976432 2222 2234556667778
Q ss_pred HHHhCCCccCCCCCCceEEecc--CCCcEEEEeecceecc
Q 004115 456 QILSHGFFHADPHPGNIAVDDV--NGGRLIFYDFGMMGSI 493 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~--~~g~I~LlDFGlv~~L 493 (773)
.+|.+|++|+|+||.||+++.. .+++++|+||+-...+
T Consensus 120 yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 120 YLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 9999999999999999999742 2347999995444443
No 339
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.20 E-value=8.8e-11 Score=124.54 Aligned_cols=185 Identities=16% Similarity=0.135 Sum_probs=109.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|+||+|+. +|+.||||+.+...... . .+.+
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---------------------------~-------------~~~~ 52 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE---------------------------G-------------FPIT 52 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeeccccc---------------------------C-------------chHH
Confidence 6799999999999999 58999999875432110 0 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec---------cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWE---------YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE-- 451 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e---------~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~-- 451 (773)
+..|...+.++.+ +++ .+..++.+ ..+..+++|||++| .+.+.........+...+...+.+
T Consensus 53 ~~~e~~~~~~l~h-----~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~ 126 (302)
T cd07864 53 AIREIKILRQLNH-----RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLL 126 (302)
T ss_pred HHHHHHHHHhCCC-----CCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 3344444443321 221 11111111 12357999999998 444433222223444444433322
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTG 530 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~ 530 (773)
..+..+|..|++|+|++|+||++++ ++.++++|||.+..+.......... ......++.+++... ....+..
T Consensus 127 ~aL~~LH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 127 EGLNYCHKKNFLHRDIKCSNILLNN--KGQIKLADFGLARLYNSEESRPYTN-----KVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECC--CCcEEeCcccccccccCCccccccc-----ceeccCccChHHhcCCCCCCchh
Confidence 3467899999999999999999985 7899999999998775433211100 011222344444332 2345667
Q ss_pred ChHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFL 543 (773)
Q Consensus 531 D~~~l~~~i~~~l 543 (773)
|++++...+.+++
T Consensus 200 Di~slG~~~~el~ 212 (302)
T cd07864 200 DVWSCGCILGELF 212 (302)
T ss_pred HHHHHHHHHHHHH
Confidence 9998887666554
No 340
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.20 E-value=1.2e-10 Score=117.27 Aligned_cols=176 Identities=20% Similarity=0.203 Sum_probs=111.6
Q ss_pred ceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q 004115 312 SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA 389 (773)
Q Consensus 312 SiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~ 389 (773)
++|+||+|+. +|+.||+|+.+.+....- .-++..|++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----------------------------------------~~~~~~e~~ 39 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-----------------------------------------RERILREIS 39 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-----------------------------------------HHHHHHHHH
Confidence 5899999999 479999999855432110 113444554
Q ss_pred HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCC
Q 004115 390 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 467 (773)
Q Consensus 390 Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDp 467 (773)
.+.++ .++++.-+.-+.......+++|||++|.+|.++..... ..+...+...+.+ ..+..+|..|++|+|+
T Consensus 40 ~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i 113 (244)
T smart00220 40 ILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDL 113 (244)
T ss_pred HHHhC-----CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence 44443 11222111111112356799999999999988654322 1444444333322 3467889999999999
Q ss_pred CCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 468 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 468 HPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+|.||++++ ++.++++|||.+..+..... .......+.++.++....+...+..|.+++...+.+++
T Consensus 114 ~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~ 180 (244)
T smart00220 114 KPENILLDE--DGHVKLADFGLARQLDPGGL-------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL 180 (244)
T ss_pred CHHHeEECC--CCcEEEccccceeeeccccc-------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 999999986 68999999999998876431 01122344455566655555667788888876655544
No 341
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.20 E-value=1.7e-10 Score=122.14 Aligned_cols=186 Identities=15% Similarity=0.113 Sum_probs=115.1
Q ss_pred cccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
.+.+|.|++|.||++.. ++..||||..+-.. +.
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~------------------------------------~~---- 49 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS------------------------------------DN---- 49 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC------------------------------------HH----
Confidence 35799999999999985 24568888652100 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh------------cCCCHHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------------LGVDRKRL 445 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~------------~~~d~~~l 445 (773)
..-++..|+..+.++. ++++.-..-+.......+++|||++|++|.++..... ...+...+
T Consensus 50 --~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 50 --ARKDFHREAELLTNLQ-----HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred --HHHHHHHHHHHHHhCC-----CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 0113445555444432 2333222222233566799999999999988653211 11333333
Q ss_pred HHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004115 446 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 523 (773)
Q Consensus 446 a~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l 523 (773)
...+ +...+..+|..|++|+|++|.||++++ ++.++++|||++..+......... ........+++++....
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~ 196 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVG----GHTMLPIRWMPPESIMY 196 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEeccCCccccccCCceeecC----CCCCccccccCHHHhcc
Confidence 3332 223467889999999999999999985 889999999999876432210000 00111345666776665
Q ss_pred CCCCCCCChHHHHHHHHHHH
Q 004115 524 GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 524 G~~~~~~D~~~l~~~i~~~l 543 (773)
+...+..|.+++...+.+++
T Consensus 197 ~~~~~~sDiwslG~il~~l~ 216 (288)
T cd05093 197 RKFTTESDVWSLGVVLWEIF 216 (288)
T ss_pred CCCCchhhHHHHHHHHHHHH
Confidence 66667789999987766654
No 342
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.19 E-value=1.9e-10 Score=120.33 Aligned_cols=182 Identities=20% Similarity=0.256 Sum_probs=109.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.+|.|++|+||+|+. +|+.||||+.+...... .+.+
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-----------------------------------------~~~~ 43 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-----------------------------------------EQVN 43 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCc-----------------------------------------hhhh
Confidence 4689999999999998 68999999874321110 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~ 459 (773)
...|...+.++. +++++ .+...+.+- ....+++|||++| ++.+.........+...+...+.+ ..+..+|.
T Consensus 44 ~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~ 118 (282)
T cd07831 44 NLREIQALRRLS----PHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR 118 (282)
T ss_pred HHHHHHHHhhcC----CCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 123333333332 22332 233333221 1567999999987 454433222223444444443333 34788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~ 538 (773)
.|++|+|++|.||+++. +.+++.|||.+..+....... . ..+...++.++.... +......|.+++...
T Consensus 119 ~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~~--~-----~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~ 188 (282)
T cd07831 119 NGIFHRDIKPENILIKD---DILKLADFGSCRGIYSKPPYT--E-----YISTRWYRAPECLLTDGYYGPKMDIWAVGCV 188 (282)
T ss_pred CCceecccCHHHEEEcC---CCeEEEecccccccccCCCcC--C-----CCCCcccCChhHhhcCCCCCcchhHHHHHHH
Confidence 99999999999999973 899999999998764322110 0 112333445554333 445667899999877
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 189 l~el~ 193 (282)
T cd07831 189 FFEIL 193 (282)
T ss_pred HHHHH
Confidence 66654
No 343
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.19 E-value=1.2e-10 Score=124.60 Aligned_cols=186 Identities=17% Similarity=0.100 Sum_probs=111.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+.+...... + ....
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---------------------------~-------------~~~~ 52 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---------------------------G-------------IPIS 52 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---------------------------C-------------Ccch
Confidence 5799999999999998 59999999874322110 0 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s-t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|++.+.++. +..-+.+..++.+.. ...++||||++| ++.++........+...+...+ +-..+..+|..
T Consensus 53 ~~~E~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 127 (309)
T cd07845 53 SLREITLLLNLR----HPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN 127 (309)
T ss_pred hhHHHHHHHhCC----CCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 233444444432 222233334433222 346999999987 5666543222223433333332 23347889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|++|+||+++. ++.++|+|||++..+....... .. ......+++++...- .......|++++...+
T Consensus 128 ~i~H~dl~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~-~~-----~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il 199 (309)
T cd07845 128 FIIHRDLKVSNLLLTD--KGCLKIADFGLARTYGLPAKPM-TP-----KVVTLWYRAPELLLGCTTYTTAIDMWAVGCIL 199 (309)
T ss_pred CeecCCCCHHHEEECC--CCCEEECccceeeecCCccCCC-Cc-----ccccccccChhhhcCCCCcCchHHHHHHHHHH
Confidence 9999999999999985 7899999999998775432110 00 001223444554432 2334567899988777
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
++++.
T Consensus 200 ~el~~ 204 (309)
T cd07845 200 AELLA 204 (309)
T ss_pred HHHHh
Confidence 66653
No 344
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.19 E-value=4.1e-10 Score=118.26 Aligned_cols=149 Identities=16% Similarity=0.159 Sum_probs=97.7
Q ss_pred cccc-ccceeEEEEEeecCeeEEEEEec-CCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIA-AASLGQVHRARLKGEEVVVKVQR-PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIg-saSiGQVhrA~l~G~~VAVKVqr-P~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+| .|+.|.||+....|..+|||.-+ +++... ++... +.......-.
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~k-------------v~~~~-----------------~~~~~~~~~r 86 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGK-------------LSKDR-----------------YLFTGLERTR 86 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHh-------------hhhhc-----------------ccccchhhhH
Confidence 4677 89999999999989999999763 332111 11100 0000011234
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc---C---CCeEEEEeecCC-CChhhhhhhhhcCCCHHHHHHHHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY---T---TPQILTMEYVPG-IKINRIQSLDELGVDRKRLGRYAVESYLEQ 456 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~---s---t~~vLVMEyieG-~~L~d~~~l~~~~~d~~~la~~li~~~l~q 456 (773)
+.+|.+.+.++.+ +++.+|.++... . .+.+++|||++| .++.++.. ....+.. .... +...+..
T Consensus 87 ~~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~~-~~~~-i~~~l~~ 157 (239)
T PRK01723 87 AFAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSEE-QWQA-IGQLIAR 157 (239)
T ss_pred HHHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCHH-HHHH-HHHHHHH
Confidence 5667777777754 346667665421 1 123699999998 67877642 2222322 2222 4456899
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
+|..|++|+|+||+|||+++ +++++|+|||.+..-.+
T Consensus 158 lH~~GI~HrDlkp~NILv~~--~~~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 158 FHDAGVYHADLNAHNILLDP--DGKFWLIDFDRGELRTP 194 (239)
T ss_pred HHHCCCCCCCCCchhEEEcC--CCCEEEEECCCcccCCC
Confidence 99999999999999999985 67999999998887653
No 345
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.19 E-value=1.5e-10 Score=122.09 Aligned_cols=185 Identities=16% Similarity=0.090 Sum_probs=113.6
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
..+|.|++|.||+|.. ++..|++|.......
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------------------------------------------ 48 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE------------------------------------------ 48 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH------------------------------------------
Confidence 6799999999999964 356888887521100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh--------------cCCCHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--------------LGVDRKR 444 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~--------------~~~d~~~ 444 (773)
...-+|.+|.+.+.++. ++++.-..-+.......+++|||++|++|.++..... ...+...
T Consensus 49 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (280)
T cd05092 49 SARQDFQREAELLTVLQ-----HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQ 123 (280)
T ss_pred HHHHHHHHHHHHHhcCC-----CCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHH
Confidence 00124556665554442 2333222222233456799999999999988653211 1122333
Q ss_pred HHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004115 445 LGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 445 la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~ 522 (773)
+...+ +...+..+|..|++|+|++|.||++++ ++.+++.|||++..+......... ........+++++...
T Consensus 124 ~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~ 197 (280)
T cd05092 124 MLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTDYYRVG----GRTMLPIRWMPPESIL 197 (280)
T ss_pred HHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC--CCCEEECCCCceeEcCCCceeecC----CCccccccccCHHHhc
Confidence 33222 223467889999999999999999985 889999999998766432211110 0011123455666555
Q ss_pred cCCCCCCCChHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l 543 (773)
-+......|++++.-.+++++
T Consensus 198 ~~~~~~~~Di~slG~il~el~ 218 (280)
T cd05092 198 YRKFTTESDIWSFGVVLWEIF 218 (280)
T ss_pred cCCcCchhhHHHHHHHHHHHH
Confidence 555566789999987766654
No 346
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.18 E-value=2.2e-10 Score=121.38 Aligned_cols=186 Identities=16% Similarity=0.130 Sum_probs=109.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||..+...... + ..-.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~------~~~~ 47 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE----------------------------------G------VPST 47 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc----------------------------------c------chHH
Confidence 6799999999999998 68999999763211000 0 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~l--i~~~l~qI~~~ 460 (773)
+.+|++.+.++. ++++.-..-+.......++||||++| .+.+.... .....+...+...+ +...+..+|..
T Consensus 48 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 121 (294)
T PLN00009 48 AIREISLLKEMQ-----HGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH 121 (294)
T ss_pred HHHHHHHHHhcc-----CCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 344555444442 23322222222334567999999976 55554321 11112333322222 23447889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|++|.||+++. .++.++++|||++..+...... .. .......++.++.... .......|++++...+
T Consensus 122 ~i~H~dl~p~nill~~-~~~~~kl~dfg~~~~~~~~~~~-~~-----~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~ 194 (294)
T PLN00009 122 RVLHRDLKPQNLLIDR-RTNALKLADFGLARAFGIPVRT-FT-----HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF 194 (294)
T ss_pred CeeCCCCCcceEEEEC-CCCEEEEcccccccccCCCccc-cc-----cCceeecccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999999999999974 3568999999999765432111 00 0011233445554433 2345567899988777
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 195 ~~l~t 199 (294)
T PLN00009 195 AEMVN 199 (294)
T ss_pred HHHHh
Confidence 66553
No 347
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.18 E-value=1.7e-10 Score=140.67 Aligned_cols=193 Identities=12% Similarity=0.033 Sum_probs=118.5
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
..|.. ..||.|+||.||+|+. .++.||+|+....... ....
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~----------------------------------e~~~-- 56 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK----------------------------------EREK-- 56 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC----------------------------------HHHH--
Confidence 44543 6899999999999999 5889999987422100 0011
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeec-cCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHHH--H
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-YTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAV--E 451 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-~st~~vLVMEyieG~~L~d~~~l~---~~~~d~~~la~~li--~ 451 (773)
-.|..|+..+.++. +..-|.+...+.. .....+|||||++|++|.++.... ...++...+...+. .
T Consensus 57 ----~~~~~EI~IL~~L~----HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL 128 (1021)
T PTZ00266 57 ----SQLVIEVNVMRELK----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLL 128 (1021)
T ss_pred ----HHHHHHHHHHHHcC----CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 12344555444442 2112222222221 123468999999999998865321 12244444433332 2
Q ss_pred HHHHHHHhC-------CCccCCCCCCceEEecc---------------CCCcEEEEeecceeccChhhHHHHHHHHHHHh
Q 004115 452 SYLEQILSH-------GFFHADPHPGNIAVDDV---------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIY 509 (773)
Q Consensus 452 ~~l~qI~~~-------GffHaDpHPGNILV~~~---------------~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~ 509 (773)
..|..+|.. +++|+|+||.|||+... ..+.++|+|||++..+...... ...
T Consensus 129 ~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-------~s~ 201 (1021)
T PTZ00266 129 HALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA-------HSC 201 (1021)
T ss_pred HHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc-------ccc
Confidence 346777874 59999999999999631 1235899999999876543211 112
Q ss_pred hcCHHHHHHHHHHc--CCCCCCCChHHHHHHHHHHHH
Q 004115 510 EKDADKVLQAMVQM--GVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 510 ~~D~~~i~~~l~~l--G~~~~~~D~~~l~~~i~~~l~ 544 (773)
.+++.+++++++.- ....+..|+++|...+.+++.
T Consensus 202 vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 202 VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred CCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 45677777777632 334567899999988877765
No 348
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.17 E-value=1.9e-10 Score=119.98 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee-c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
+.||.|.+|.||+|.+ . ++.||||..+....... + ... .... . .-
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~-------------------~--~~~-~~~~---~-------~~ 53 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFG-------------------K--DKR-ERDK---S-------IG 53 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccc-------------------c--ccc-cchH---H-------HH
Confidence 5799999999999999 3 58899998754321110 0 000 0000 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHHH--HHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAVE--SYLEQI 457 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~li~--~~l~qI 457 (773)
++..|..-+.+ .. +++++.-+.-+.......+++|||++|.++.++... . ....+...+...+.+ ..+..+
T Consensus 54 ~~~~e~~~l~~---~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 129 (269)
T cd08528 54 DIVSEVTIIKE---QL-RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYL 129 (269)
T ss_pred HHHHHHHHHhh---cC-CCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHh
Confidence 22233322211 12 223332222222335667999999999999886431 1 122343333333222 336777
Q ss_pred Hh-CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 458 LS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~-~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
|. .|++|+|++|.||+++. ++.++++|||++...+.... . ....+...++.+++..-+...+..|++++.
T Consensus 130 h~~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~--~-----~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG 200 (269)
T cd08528 130 HKEKRIVHRDLTPNNIMLGE--DDKVTITDFGLAKQKQPESK--L-----TSVVGTILYSCPEIVKNEPYGEKADVWAFG 200 (269)
T ss_pred ccCCceeecCCCHHHEEECC--CCcEEEecccceeecccccc--c-----ccccCcccCcChhhhcCCCCchHHHHHHHH
Confidence 74 78999999999999985 88999999999988765431 1 111233445555555556566678999888
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+.+++
T Consensus 201 ~ll~~l~ 207 (269)
T cd08528 201 CILYQMC 207 (269)
T ss_pred HHHHHHH
Confidence 7666654
No 349
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.17 E-value=2.6e-10 Score=119.29 Aligned_cols=185 Identities=19% Similarity=0.214 Sum_probs=111.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|.. +|+.|++|..++..... .. .-+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~------~~~ 44 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE----------------------------------GI------PKT 44 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccc----------------------------------hh------HHH
Confidence 5799999999999998 68999999875432211 00 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~G 461 (773)
+..|...+.++. +..-+.+...+ ......+++|||++| ++.+.........+...+...+ +-..+..+|..|
T Consensus 45 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (283)
T cd05118 45 ALREIKLLKELN----HPNIIKLLDVF-RHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG 118 (283)
T ss_pred HHHHHHHHHHhc----CCCcchHHHhh-ccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 233333333332 11111222222 223567999999987 6665443322233433332222 223467899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i~ 540 (773)
++|+|+||.||+++. ++.++++|||.+..+....+. .. ....+...+.+++...+ ..+...|++++...+.
T Consensus 119 i~H~dl~p~nili~~--~~~~~l~df~~~~~~~~~~~~-~~-----~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~ 190 (283)
T cd05118 119 ILHRDLKPENLLINT--EGVLKLADFGLARSFGSPVRP-YT-----HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFA 190 (283)
T ss_pred eeecCcCHHHEEECC--CCcEEEeeeeeeEecCCCccc-cc-----CccCcccccCcHHHhcCCCCCchhHHHHHHHHHH
Confidence 999999999999985 789999999999888665411 10 01123334445544433 4556689999987766
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 191 ~l~t 194 (283)
T cd05118 191 ELLS 194 (283)
T ss_pred HHHh
Confidence 6543
No 350
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.17 E-value=1.5e-10 Score=122.83 Aligned_cols=190 Identities=16% Similarity=0.126 Sum_probs=111.3
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
...||.|++|+||+|.. +|+.||||+........ . + ..
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---------------------------~-------~------~~ 56 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---------------------------G-------F------PI 56 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---------------------------C-------c------hh
Confidence 36899999999999998 68999999763221100 0 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee-------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFW-------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESY 453 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~-------e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~ 453 (773)
.+.+|.+.+.++.+ ..-+.+..++. ...+..++||||+.+ .+.+.........+...+...+ +...
T Consensus 57 ~~~~e~~~l~~l~h----~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a 131 (310)
T cd07865 57 TALREIKILQLLKH----ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNG 131 (310)
T ss_pred HHHHHHHHHHhCCC----CCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 12334444444422 11222222221 123445999999987 5555432222234444444333 3334
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCh
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDT 532 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~ 532 (773)
+..+|.+|++|+|++|.||+++. ++.+++.|||++..+....... .... ........++++++..-+ ...+..|.
T Consensus 132 l~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di 207 (310)
T cd07865 132 LYYIHRNKILHRDMKAANILITK--DGILKLADFGLARAFSLSKNSK-PNRY-TNRVVTLWYRPPELLLGERDYGPPIDM 207 (310)
T ss_pred HHHHHHCCeeccCCCHHHEEECC--CCcEEECcCCCcccccCCcccC-CCCc-cCcccCccccCcHHhcCCcccCchhhh
Confidence 78899999999999999999985 7899999999998775432211 0000 000112234455544322 23456799
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+.+++
T Consensus 208 ~slG~~l~el~ 218 (310)
T cd07865 208 WGAGCIMAEMW 218 (310)
T ss_pred HHHHHHHHHHH
Confidence 99988776664
No 351
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.17 E-value=2.2e-10 Score=118.00 Aligned_cols=186 Identities=15% Similarity=0.117 Sum_probs=115.5
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+++|+|++|.||+|.. +|..||+|.....-.. . ..+-
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~-----------~~~~ 44 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-----------------------------V-----------KEKE 44 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-----------------------------c-----------hhhH
Confidence 36899999999999999 5899999976321000 0 0011
Q ss_pred HHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQIL 458 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~l--i~~~l~qI~ 458 (773)
.+.+|...+.++.+ ++ +.+...+ ......+++|||++|.+|.++..... ...+...+.... +...+..+|
T Consensus 45 ~~~~E~~~l~~~~h-----~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 118 (257)
T cd08225 45 ASKKEVILLAKMKH-----PNIVTFFASF-QENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH 118 (257)
T ss_pred HHHHHHHHHHhCCC-----CChhhhhhee-ccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23344444444321 22 1122211 23456799999999999988653221 123333333222 234467889
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHH
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~ 538 (773)
..|++|+|++|.||++++ ++..+++.|||.+..+....... ....+.+.+++++....+......|++++...
T Consensus 119 ~~~i~H~dl~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i 191 (257)
T cd08225 119 DRKILHRDIKSQNIFLSK-NGMVAKLGDFGIARQLNDSMELA------YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV 191 (257)
T ss_pred HCCcccccCCHHHEEEcC-CCCeEEecccccchhccCCcccc------cccCCCccccCHHHHcCCCCCchhhHHHHHHH
Confidence 999999999999999975 23457999999998775432211 11234555666666665666677899998876
Q ss_pred HHHHH
Q 004115 539 AQFFL 543 (773)
Q Consensus 539 i~~~l 543 (773)
+.+++
T Consensus 192 l~~l~ 196 (257)
T cd08225 192 LYELC 196 (257)
T ss_pred HHHHH
Confidence 65554
No 352
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.17 E-value=6.7e-11 Score=124.33 Aligned_cols=184 Identities=17% Similarity=0.170 Sum_probs=109.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
++||+|++|+||+|+. +|+.||||..+...... +. +-.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~------~~~ 45 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE----------------------------------GV------PST 45 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc----------------------------------cc------chH
Confidence 6899999999999998 68999999874221100 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li--~~~l~qI~~ 459 (773)
+.+|++.+.++. +++ +.+...+ ......++||||+++ ++.++.... ....+...+...+. ...+..+|.
T Consensus 46 ~~~E~~~l~~l~-----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~ 118 (284)
T cd07860 46 AIREISLLKELN-----HPNIVKLLDVI-HTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS 118 (284)
T ss_pred HHHHHHHHHhcC-----CCCCcchhhhc-ccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344554444442 122 2222222 234567999999975 666654322 22344444433332 234678999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~ 538 (773)
.|++|+|++|+||++++ ++.++++|||.+..+.......... .....++.+++... .......|++++...
T Consensus 119 ~~i~H~~l~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 190 (284)
T cd07860 119 HRVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTHE------VVTLWYRAPEILLGCKYYSTAVDIWSLGCI 190 (284)
T ss_pred CCeecCCCCHHHEEECC--CCCEEEeeccchhhcccCccccccc------cccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence 99999999999999986 8899999999987664332111000 01222333333221 223445788888877
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+++++.
T Consensus 191 l~~l~t 196 (284)
T cd07860 191 FAEMVT 196 (284)
T ss_pred HHHHHH
Confidence 666553
No 353
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.17 E-value=3.3e-10 Score=123.03 Aligned_cols=186 Identities=16% Similarity=0.095 Sum_probs=111.4
Q ss_pred ccccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 376 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 376 (773)
++||.|++|+||+|+.. +..||+|+.+...... .
T Consensus 18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~-- 60 (334)
T cd05100 18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDK-----------------------------------D-- 60 (334)
T ss_pred ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHH-----------------------------------H--
Confidence 68999999999999851 2368999774221110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCC
Q 004115 377 VLYQEIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGV 440 (773)
Q Consensus 377 ~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~ 440 (773)
.-++..|...+.++. .++++. +...+ ......+++|||++|++|.++..... ...
T Consensus 61 ----~~~~~~E~~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l 131 (334)
T cd05100 61 ----LSDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQL 131 (334)
T ss_pred ----HHHHHHHHHHHHhhc----CCCCeeeeeEEE-ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccC
Confidence 012344554444442 223322 22222 22345799999999999988653211 012
Q ss_pred CHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004115 441 DRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 518 (773)
Q Consensus 441 d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~ 518 (773)
....+...+ +...+..+|..|++|+|++|.||++++ ++.++|+|||.+..+......... ........++++
T Consensus 132 ~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aP 205 (334)
T cd05100 132 TFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE--DNVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAP 205 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEECCcccceecccccccccc----cCCCcCceEcCH
Confidence 222222222 233467889999999999999999986 789999999998876542211000 000111235556
Q ss_pred HHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 519 AMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 519 ~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
+...-+......|++++...+.+++
T Consensus 206 E~~~~~~~~~~~Di~slG~il~el~ 230 (334)
T cd05100 206 EALFDRVYTHQSDVWSFGVLLWEIF 230 (334)
T ss_pred HHhccCCcCchhhhHHHHHHHHHHH
Confidence 6555455556689999887766554
No 354
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.16 E-value=8.4e-11 Score=133.43 Aligned_cols=184 Identities=17% Similarity=0.156 Sum_probs=125.8
Q ss_pred ccccccceeEEEEEee--c-C---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--K-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~-G---~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+-||+|.||.||+|++ . + .+||||..+-.- ...-.
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~---------------------------------------~~~~~ 203 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS---------------------------------------ELTKE 203 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc---------------------------------------cccHH
Confidence 6799999999999999 2 3 238999763100 00011
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 457 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI 457 (773)
+-.+|.+||+-|..+. +++|.--.-+.....+.+||||+|+|++|.++..-....++..+....... ..+.++
T Consensus 204 ~~~e~m~EArvMr~l~-----H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL 278 (474)
T KOG0194|consen 204 QIKEFMKEARVMRQLN-----HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL 278 (474)
T ss_pred HHHHHHHHHHHHHhCC-----CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH
Confidence 2346889998777653 243332222335667889999999999999986543333555544444444 448889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~-l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
|..+++|||+-.-|.|+.. ++.+++.||||+..-+...... .. .=-...++++.+..|..++.+|++++.
T Consensus 279 h~k~~IHRDIAARNcL~~~--~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfG 349 (474)
T KOG0194|consen 279 HSKNCIHRDIAARNCLYSK--KGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFG 349 (474)
T ss_pred HHCCCcchhHhHHHheecC--CCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhhee
Confidence 9999999999999999985 5678999999977654211111 11 123567778889999999999999887
Q ss_pred HHHHHH
Q 004115 537 RTAQFF 542 (773)
Q Consensus 537 ~~i~~~ 542 (773)
..+.++
T Consensus 350 V~~~Ei 355 (474)
T KOG0194|consen 350 VLLWEI 355 (474)
T ss_pred eeEEee
Confidence 654443
No 355
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.15 E-value=3.4e-10 Score=120.35 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=108.2
Q ss_pred hccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 301 ERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 301 ~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
+.++ .+.+|+|++|.||+|.. +|+.||||+.+...... -...
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~~~~ 59 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-----------------------------------ENKR 59 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-----------------------------------HHHH
Confidence 3443 37899999999999999 39999999884321100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHH
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLE 455 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~ 455 (773)
+..|...+.+ .. +++++.-..-+.......+++|||+++ .+.++........+...+.... +...+.
T Consensus 60 ------~~~e~~~~~~---~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~ 128 (296)
T cd06618 60 ------ILMDLDVVLK---SH-DCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALH 128 (296)
T ss_pred ------HHHHHHHHHh---cc-CCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 1111111111 11 122221111111223467999999976 5555433222233433332222 223366
Q ss_pred HHHh-CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC----CCCCCC
Q 004115 456 QILS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG----VLVPTG 530 (773)
Q Consensus 456 qI~~-~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG----~~~~~~ 530 (773)
.+|. .|++|+|++|.||+++. ++.++|+|||++..+....... ...+...+++++..... ......
T Consensus 129 ~lH~~~~i~H~dl~p~nill~~--~~~~kL~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~ 199 (296)
T cd06618 129 YLKEKHGVIHRDVKPSNILLDA--SGNVKLCDFGISGRLVDSKAKT-------RSAGCAAYMAPERIDPPDPNPKYDIRA 199 (296)
T ss_pred HHHhhCCEecCCCcHHHEEEcC--CCCEEECccccchhccCCCccc-------CCCCCccccCHhhcCCCCCccccccch
Confidence 7886 69999999999999975 8899999999998775432111 01123345556655432 245567
Q ss_pred ChHHHHHHHHHHH
Q 004115 531 DTTAVRRTAQFFL 543 (773)
Q Consensus 531 D~~~l~~~i~~~l 543 (773)
|.+++...+.+++
T Consensus 200 Di~slG~il~el~ 212 (296)
T cd06618 200 DVWSLGISLVELA 212 (296)
T ss_pred hHHHHHHHHHHHH
Confidence 9999987776665
No 356
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.15 E-value=5.9e-10 Score=116.82 Aligned_cols=186 Identities=18% Similarity=0.156 Sum_probs=111.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+.+...... ... .+
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~------~~ 44 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE----------------------------------GIP------LS 44 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccc----------------------------------hhh------hh
Confidence 5689999999999999 48999999885432211 000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec----cCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWE----YTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~li--~~~l~ 455 (773)
+.+|...+.++.. . +++++ .+...+.. .+...+++|||++| .+.++.... ....+...+...+. ...+.
T Consensus 45 ~~~e~~~l~~l~~-~-~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~ 121 (287)
T cd07838 45 TLREIALLKQLES-F-EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121 (287)
T ss_pred HHHHHHHHHHhhc-c-CCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 2233333333321 1 11221 12222211 11237899999987 566654321 12244444333332 23478
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+|..|++|+|++|+||+++. ++.++++|||.+..++...... . ......++.++....+......|.+++
T Consensus 122 ~LH~~~i~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~--~-----~~~~~~~~~PE~~~~~~~~~~~Di~s~ 192 (287)
T cd07838 122 FLHSHRIVHRDLKPQNILVTS--DGQVKIADFGLARIYSFEMALT--S-----VVVTLWYRAPEVLLQSSYATPVDMWSV 192 (287)
T ss_pred HHHHCCeeeccCChhhEEEcc--CCCEEEeccCcceeccCCcccc--c-----ccccccccChHHhccCCCCCcchhhhH
Confidence 899999999999999999986 7999999999998875432100 0 012233455555555555667899999
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+.+++
T Consensus 193 G~~l~~l~ 200 (287)
T cd07838 193 GCIFAELF 200 (287)
T ss_pred HHHHHHHH
Confidence 87776665
No 357
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.15 E-value=1.6e-10 Score=133.65 Aligned_cols=147 Identities=11% Similarity=0.036 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC----CCHHH---HHHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRKR---LGRYAVESYL 454 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~----~d~~~---la~~li~~~l 454 (773)
.+.+|+..+.++. +++| .+-.++ +.....+++||++.+. +.++....... ..... ++.. +...+
T Consensus 209 ~~~~Ei~il~~l~-----HpnIv~l~~~~-~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~q-l~~aL 280 (501)
T PHA03210 209 QLENEILALGRLN-----HENILKIEEIL-RSEANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQ-LLCAV 280 (501)
T ss_pred HHHHHHHHHHhCC-----CCCcCcEeEEE-EECCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHH-HHHHH
Confidence 4566766666553 2332 222222 3445679999998763 33322111100 11111 2222 22447
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
..+|..|++|+|+||.|||++. ++.++|+|||++..+.......- .-..+...++++++..-+......|+++
T Consensus 281 ~yLH~~gIiHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwS 353 (501)
T PHA03210 281 EYIHDKKLIHRDIKLENIFLNC--DGKIVLGDFGTAMPFEKEREAFD-----YGWVGTVATNSPEILAGDGYCEITDIWS 353 (501)
T ss_pred HHHHhCCeecCCCCHHHEEECC--CCCEEEEeCCCceecCccccccc-----ccccCCcCCCCchhhcCCCCCcHHHHHH
Confidence 8899999999999999999985 88999999999988754321100 0012445555666665555566789999
Q ss_pred HHHHHHHHHH
Q 004115 535 VRRTAQFFLN 544 (773)
Q Consensus 535 l~~~i~~~l~ 544 (773)
+...+.+++.
T Consensus 354 lGvil~ell~ 363 (501)
T PHA03210 354 CGLILLDMLS 363 (501)
T ss_pred HHHHHHHHHH
Confidence 9988777663
No 358
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.15 E-value=4.4e-10 Score=118.53 Aligned_cols=181 Identities=17% Similarity=0.182 Sum_probs=109.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||+|++|.||+++. +|+.||||..+..... ..+.+
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------------------~~~~~ 48 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-----------------------------------------KEQKR 48 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-----------------------------------------HHHHH
Confidence 5799999999999998 5899999976422110 11223
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh----hhcCCCHHHHHHHHHH--HHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL----DELGVDRKRLGRYAVE--SYLE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l----~~~~~d~~~la~~li~--~~l~ 455 (773)
+..|...+.++. ++++ +++++. ......+++|||+++ ++.++... ....++...+...... ..++
T Consensus 49 ~~~e~~~l~~~~----~~~~--iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 121 (288)
T cd06616 49 LLMDLDVVMRSS----DCPY--IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALN 121 (288)
T ss_pred HHHHHHHHHHhc----CCCC--EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 445554444432 1222 233322 234567999999875 44443211 1122333333333222 3367
Q ss_pred HHHh-CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCC
Q 004115 456 QILS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGD 531 (773)
Q Consensus 456 qI~~-~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG---~~~~~~D 531 (773)
.+|. .|++|+|++|.||+++. ++.++++|||++..+...... ....+...+++++....+ ...+..|
T Consensus 122 ~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~D 192 (288)
T cd06616 122 YLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISGQLVDSIAK-------TRDAGCRPYMAPERIDPSARDGYDVRSD 192 (288)
T ss_pred HHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhHHhccCCcc-------ccccCccCccCHHHhccccccCCcchhh
Confidence 7776 59999999999999985 789999999998765432110 001223345566655443 4556789
Q ss_pred hHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFL 543 (773)
Q Consensus 532 ~~~l~~~i~~~l 543 (773)
++++...+.+++
T Consensus 193 i~slG~il~el~ 204 (288)
T cd06616 193 VWSLGITLYEVA 204 (288)
T ss_pred hhHHHHHHHHHH
Confidence 999887766554
No 359
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.15 E-value=1.3e-10 Score=123.50 Aligned_cols=192 Identities=14% Similarity=0.092 Sum_probs=109.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+........ . . ..+
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------~---~--------------~~~ 53 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-----------------------G---F--------------PIT 53 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------C---c--------------chh
Confidence 6799999999999998 58999999874332111 0 0 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-------cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE-------YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYL 454 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-------~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l 454 (773)
+.+|...+.++. +..-+.+..++.+ .....++||||+++. +.+.........+...+...+. ...+
T Consensus 54 ~~~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al 128 (311)
T cd07866 54 ALREIKILKKLK----HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGI 128 (311)
T ss_pred HHHHHHHHHhcC----CCCccchhhheecccccccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 234444444332 1111112222211 122359999999874 4333222222344444333332 2347
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHH-----HHHHHhhcCHHHHHHHHHHcC-CCCC
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE-----AFYGIYEKDADKVLQAMVQMG-VLVP 528 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~-----l~~al~~~D~~~i~~~l~~lG-~~~~ 528 (773)
..+|..|++|+|++|+||++++ ++.++++|||++..+.......... .-......+..++++++..-+ ...+
T Consensus 129 ~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (311)
T cd07866 129 NYLHENHILHRDIKAANILIDN--QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTT 206 (311)
T ss_pred HHHHhCCeecCCCCHHHEEECC--CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCc
Confidence 8899999999999999999986 8899999999998765432110000 000001123334555554322 2455
Q ss_pred CCChHHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFLN 544 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l~ 544 (773)
..|++++...+.+++.
T Consensus 207 ~~Dv~slG~il~el~~ 222 (311)
T cd07866 207 AVDIWGIGCVFAEMFT 222 (311)
T ss_pred hhHhHHHHHHHHHHHh
Confidence 6799999877766653
No 360
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.14 E-value=4e-10 Score=118.36 Aligned_cols=186 Identities=13% Similarity=0.098 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEee-c-----CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-K-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~-----G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
+-||.|++|.||+|.. . +..|++|+........
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~----------------------------------------- 50 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEI----------------------------------------- 50 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHH-----------------------------------------
Confidence 5799999999999998 4 5889999874322111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh-------cCCCHHHHHHHH--
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------LGVDRKRLGRYA-- 449 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------~~~d~~~la~~l-- 449 (773)
+.-++.+|+..+.++ +++++. +.....+.....++++||+++++|.++..... ..++...+...+
T Consensus 51 ~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 125 (280)
T cd05043 51 QVTLLLQESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125 (280)
T ss_pred HHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 111344555544443 223322 22222222356799999999999988653321 123344333333
Q ss_pred HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004115 450 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 529 (773)
Q Consensus 450 i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~ 529 (773)
+...+..+|..|++|+|++|.||++++ ++.++++|||+++.+.+....... ....+...+++++...-......
T Consensus 126 i~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~ 199 (280)
T cd05043 126 IACGMSYLHKRGVIHKDIAARNCVIDE--ELQVKITDNALSRDLFPMDYHCLG----DNENRPVKWMALESLVNKEYSSA 199 (280)
T ss_pred HHHHHHHHHHCCEeecccCHhhEEEcC--CCcEEECCCCCcccccCCceEEeC----CCCCcchhccCHHHHhcCCCCch
Confidence 333478899999999999999999985 789999999999876443211000 00112233555665555555677
Q ss_pred CChHHHHHHHHHHH
Q 004115 530 GDTTAVRRTAQFFL 543 (773)
Q Consensus 530 ~D~~~l~~~i~~~l 543 (773)
.|++++...+.+++
T Consensus 200 ~Di~slG~~l~el~ 213 (280)
T cd05043 200 SDVWSFGVLLWELM 213 (280)
T ss_pred hhHHHhHHHHHHHh
Confidence 89999987766554
No 361
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.14 E-value=3.1e-10 Score=118.68 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=112.2
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
.-+|.|++|.||+|+.. .+.|++|+....-. ....
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------------------------------~~~~------- 52 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-------------------------------ENLQ------- 52 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-------------------------------hHHH-------
Confidence 56999999999999961 36799997522110 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc--------CCCHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL--------GVDRKRLGRY 448 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~--------~~d~~~la~~ 448 (773)
-+|.+|++.+.++.+ ++ +++++. ......++||||++|++|.++...... .+........
T Consensus 53 ---~~~~~E~~~l~~l~h-----~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~ 122 (275)
T cd05046 53 ---SEFRRELDMFRKLSH-----KN--VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122 (275)
T ss_pred ---HHHHHHHHHHHhcCC-----cc--eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence 134556665555532 22 233332 223457999999999999987543221 2333333332
Q ss_pred H--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004115 449 A--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 526 (773)
Q Consensus 449 l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~ 526 (773)
+ +...+..+|..|++|+|++|.||+++. ++.+++.|||+............... .....++.++....+..
T Consensus 123 ~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~PE~~~~~~~ 195 (275)
T cd05046 123 CTQIALGMDHLSNARFVHRDLAARNCLVSS--QREVKVSLLSLSKDVYNSEYYKLRNA-----LIPLRWLAPEAVQEDDF 195 (275)
T ss_pred HHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcEEEcccccccccCcccccccCCc-----eeEEeecChhhhccCCC
Confidence 2 333478899999999999999999986 78999999998875432211110000 01122455555555555
Q ss_pred CCCCChHHHHHHHHHHH
Q 004115 527 VPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 527 ~~~~D~~~l~~~i~~~l 543 (773)
.+..|.+++...+.+++
T Consensus 196 ~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 196 STKSDVWSFGVLMWEVF 212 (275)
T ss_pred CchhhHHHHHHHHHHHH
Confidence 66789999887766554
No 362
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.13 E-value=4.6e-10 Score=117.11 Aligned_cols=185 Identities=16% Similarity=0.147 Sum_probs=110.1
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.||.|++|.||+|.+ +|+.||||+......... .
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------------~ 44 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSS----------------------------------------D 44 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChH----------------------------------------H
Confidence 5799999999999986 368999998854432110 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--------CCeEEEEeecCCCChhhhhhhhhc-----CCCHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--------TPQILTMEYVPGIKINRIQSLDEL-----GVDRKRLGR 447 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--------t~~vLVMEyieG~~L~d~~~l~~~-----~~d~~~la~ 447 (773)
.-++.+|.+.+.++. +++ +.+.+.... .-.++++||.+++++.++...... ..+...+..
T Consensus 45 ~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 117 (273)
T cd05074 45 IEEFLREAACMKEFD-----HPN--VIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVR 117 (273)
T ss_pred HHHHHHHHHHHhcCC-----CCC--cceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHH
Confidence 112344554444432 222 333332111 123789999999998875432211 123332322
Q ss_pred HH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004115 448 YA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 525 (773)
Q Consensus 448 ~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~ 525 (773)
.+ +...+..+|..|++|+|++|.||+++. ++.++++|||.+..+.......... .....+.++.+.....+.
T Consensus 118 ~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~~~~pe~~~~~~ 191 (273)
T cd05074 118 FMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTVCVADFGLSKKIYSGDYYRQGC----ASKLPVKWLALESLADNV 191 (273)
T ss_pred HHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCEEECcccccccccCCcceecCC----CccCchhhcCHhHHhcCc
Confidence 22 223467889999999999999999975 7899999999988764322100000 001112334444445555
Q ss_pred CCCCCChHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l 543 (773)
.....|++++.-.+.+++
T Consensus 192 ~~~~sDi~slG~il~el~ 209 (273)
T cd05074 192 YTTHSDVWAFGVTMWEIM 209 (273)
T ss_pred cchhhhhHHHHHHHHHHh
Confidence 566779999887766554
No 363
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.13 E-value=3.5e-10 Score=118.65 Aligned_cols=183 Identities=17% Similarity=0.236 Sum_probs=107.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.|+||........ . .+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~------------~~~~ 43 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-----------------------------W------------EECM 43 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccc-----------------------------h------------hHHH
Confidence 5699999999999999 5889999976322110 0 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~--~~l~qI~~ 459 (773)
..+|...+.++. +++++. +...+ ......++||||+ ++++.+...... ..++...+...+.+ ..+..+|.
T Consensus 44 ~~~e~~~l~~~~----~h~~i~~~~~~~-~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~ 117 (283)
T cd07830 44 NLREVKSLRKLN----EHPNIVKLKEVF-RENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117 (283)
T ss_pred HHHHHHHHHhcc----CCCCchhHHHHh-hcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 112333232221 112221 11111 2245679999999 556665433221 23444444443322 33678899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~-~lG~~~~~~D~~~l~~~ 538 (773)
.|++|+|++|+||++++ ++.++++|||.+..+....... . ..++..+++++.. .........|.+++...
T Consensus 118 ~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~--~-----~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~ 188 (283)
T cd07830 118 HGFFHRDLKPENLLVSG--PEVVKIADFGLAREIRSRPPYT--D-----YVSTRWYRAPEILLRSTSYSSPVDIWALGCI 188 (283)
T ss_pred CCcccCCCChhhEEEcC--CCCEEEeecccceeccCCCCcC--C-----CCCcccccCceeeecCcCcCCccchhhHHHH
Confidence 99999999999999986 8999999999998775432110 0 0122233344433 22334566899998877
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+.+++.
T Consensus 189 l~el~~ 194 (283)
T cd07830 189 MAELYT 194 (283)
T ss_pred HHHHHh
Confidence 666553
No 364
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.13 E-value=4.8e-10 Score=117.19 Aligned_cols=184 Identities=17% Similarity=0.129 Sum_probs=111.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|.+|.||+|+. +|+.|++|+........ .+...
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~------ 44 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE----------------------------------GIPST------ 44 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccc----------------------------------cccHH------
Confidence 4689999999999999 58999999986543110 00011
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+..|+.-+.++. ++++ .+...+. .....++||||+++ +|.++........+...+...+. ...+..+|..
T Consensus 45 ~~~e~~~l~~~~-----~~~i~~~~~~~~-~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 117 (282)
T cd07829 45 ALREISLLKELK-----HPNIVKLLDVIH-TERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH 117 (282)
T ss_pred HHHHHHHHHhcC-----CCCHHHHHhhhh-cCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 112222222221 1111 1111221 23567999999986 78776543322344444333322 2346889999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~~l~~~i 539 (773)
|++|+|++|.||++++ ++.+++.|||.+..........-. ...+...+++++...+ ...+..|++++...+
T Consensus 118 ~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l 189 (282)
T cd07829 118 RILHRDLKPQNILINR--DGVLKLADFGLARAFGIPLRTYTH------EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF 189 (282)
T ss_pred CcccCCCChheEEEcC--CCCEEEecCCcccccCCCccccCc------cccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence 9999999999999986 789999999998876544321100 0112234445544433 556678999998777
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 190 ~~l~~ 194 (282)
T cd07829 190 AEMIT 194 (282)
T ss_pred HHHHh
Confidence 66553
No 365
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.12 E-value=3.9e-10 Score=130.26 Aligned_cols=78 Identities=19% Similarity=0.214 Sum_probs=55.2
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcC-----------------------CCHHHHHHHH--HHHHHHHHHhCCCccCCCCC
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELG-----------------------VDRKRLGRYA--VESYLEQILSHGFFHADPHP 469 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~-----------------------~d~~~la~~l--i~~~l~qI~~~GffHaDpHP 469 (773)
...+|||||++|++|.++....... .+...+.... +...+..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 4579999999999998865321100 0111111111 22346778999999999999
Q ss_pred CceEEeccCCCcEEEEeecceeccC
Q 004115 470 GNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 470 GNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
.||+++. ++.++++|||++..+.
T Consensus 338 ~NILl~~--~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 338 ENLLVTV--DGQVKIIDFGAAVDMC 360 (507)
T ss_pred HhEEECC--CCcEEEEeCcCccccc
Confidence 9999985 7899999999987654
No 366
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.12 E-value=2.2e-10 Score=120.33 Aligned_cols=185 Identities=19% Similarity=0.197 Sum_probs=109.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|+||+|+. +|+.||||+.+...... .... +
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~------~ 44 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE----------------------------------GVPS------T 44 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc----------------------------------cchh------H
Confidence 5689999999999998 69999999874322110 0000 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+.+|...+.++. +..-+.+...+. .....+++|||+++ ++.++..... ...+...+..... -..+..+|..
T Consensus 45 ~~~E~~~l~~l~----~~~iv~~~~~~~-~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~ 118 (283)
T cd07835 45 AIREISLLKELN----HPNIVRLLDVVH-SENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH 118 (283)
T ss_pred HHHHHHHHHhcC----CCCccCHhheec-cCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 333444444332 111122222222 23567999999965 6777543221 1244444333322 2347888999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|++|+||++++ ++.++++|||++..+....+..... .....+++++.... .......|++++...+
T Consensus 119 ~~~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~------~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l 190 (283)
T cd07835 119 RVLHRDLKPQNLLIDR--EGALKLADFGLARAFGVPVRTYTHE------VVTLWYRAPEILLGSRQYSTPVDIWSIGCIF 190 (283)
T ss_pred CeeCCCCCHHHEEEcC--CCcEEEeecccccccCCCccccCcc------ccccCCCCCceeecCcccCcHHHHHHHHHHH
Confidence 9999999999999986 8899999999998765432211000 01222333443322 2234557888888766
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
.+++.
T Consensus 191 ~~l~~ 195 (283)
T cd07835 191 AEMVN 195 (283)
T ss_pred HHHHh
Confidence 66553
No 367
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.12 E-value=1.8e-10 Score=125.12 Aligned_cols=186 Identities=15% Similarity=0.130 Sum_probs=107.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||||+..|.-... .. .+
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~------~~ 49 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-----------------------------------FC------QR 49 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccch-----------------------------------hH------HH
Confidence 6799999999999998 68999999875421110 00 01
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
+..|...+.+++ +..-+.+..++.. .....+++|||++| .+.++.. ...++...+...+ +...+..+
T Consensus 50 ~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~L 122 (336)
T cd07849 50 TLREIKILRRFK----HENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK--TQHLSNDHIQYFLYQILRGLKYI 122 (336)
T ss_pred HHHHHHHHHhCC----CCCcCchhheeecccccccceEEEEehhccc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 223333333332 1111222222111 12346999999987 5554432 2223333333322 22347889
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~-~lG~~~~~~D~~~l~ 536 (773)
|..|++|+|+||.||+++. ++.++++|||++..+.......- . ..-..+...+++++.. .........|++++.
T Consensus 123 H~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~--~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 197 (336)
T cd07849 123 HSANVLHRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHTG--F-LTEYVATRWYRAPEIMLNSKGYTKAIDIWSVG 197 (336)
T ss_pred HhCCeeccCCCHHHEEECC--CCCEEECcccceeeccccccccC--C-cCCcCcCCCccChHHhhCCCCCCcHHHHHHHH
Confidence 9999999999999999985 78999999999887644211000 0 0001122334455543 223345567999998
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+.+++.
T Consensus 198 vil~el~~ 205 (336)
T cd07849 198 CILAEMLS 205 (336)
T ss_pred HHHHHHHh
Confidence 77766553
No 368
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=5e-11 Score=129.67 Aligned_cols=189 Identities=20% Similarity=0.175 Sum_probs=121.9
Q ss_pred ccCc-ccccccceeEEEEEeecC--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 302 RFDV-EPIAAASLGQVHRARLKG--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 302 ~fd~-~PIgsaSiGQVhrA~l~G--~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+|+- ..||.||||.|-.|..+| +-+||||++.++--+ ..|++.- +.++..-...++ +.
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvect-----m~EKrvLAL~~k---pp---------- 410 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECT-----MVEKRVLALPGK---PP---------- 410 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccce-----ehhhhheecCCC---Cc----------
Confidence 4553 689999999999999954 679999998776322 1121110 000000000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHHHHHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLEQI 457 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~~~~~d~~~la~~li~~~l~qI 457 (773)
| +..+..-|+. -.+.+.||||+.|+.|-- +++.........-....-+...|-.+
T Consensus 411 -----F------L~qlHScFQT-------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFL 466 (683)
T KOG0696|consen 411 -----F------LVQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFL 466 (683)
T ss_pred -----h------HHHHHHHhhh-------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhh
Confidence 1 1112222221 245789999999998863 44444433333333334455557778
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceecc--ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI--SPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L--s~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
|..|++.||+|-.|++++. +|.|++.||||++.- +..+... ..+.+++++++++...-.....|-+++
T Consensus 467 h~kgIiYRDLKLDNvmLd~--eGHiKi~DFGmcKEni~~~~TTkT--------FCGTPdYiAPEIi~YqPYgksvDWWa~ 536 (683)
T KOG0696|consen 467 HSKGIIYRDLKLDNVMLDS--EGHIKIADFGMCKENIFDGVTTKT--------FCGTPDYIAPEIIAYQPYGKSVDWWAF 536 (683)
T ss_pred hcCCeeeeeccccceEecc--CCceEeeecccccccccCCcceee--------ecCCCcccccceEEecccccchhHHHH
Confidence 9999999999999999986 899999999999852 2222222 357899999999887777777899998
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+++++
T Consensus 537 GVLLyEml 544 (683)
T KOG0696|consen 537 GVLLYEML 544 (683)
T ss_pred HHHHHHHH
Confidence 88776665
No 369
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.11 E-value=8.3e-11 Score=136.24 Aligned_cols=212 Identities=17% Similarity=0.226 Sum_probs=142.3
Q ss_pred hhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHH
Q 004115 272 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNL 346 (773)
Q Consensus 272 Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~DL~il 346 (773)
.+.-+.|+.+++.-+.+. ||-+.++--+-.+ ++.||+|.||.||+|+| .| ..||||.++-|-.+.
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~I-e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek-------- 672 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKI-EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK-------- 672 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEE-EEEEecccccceecccccCCCCcceeEEEeeeccCccHH--------
Confidence 455666777765544433 2333322222222 36899999999999999 34 579999987665332
Q ss_pred HHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecC
Q 004115 347 RVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVP 425 (773)
Q Consensus 347 ~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyie 425 (773)
+..||+.||.-|-+|. +|+| +.--|+ .-+....++.||++
T Consensus 673 ---------------------------------qrrdFL~EAsIMGQFd-----HPNIIrLEGVV-Tks~PvMIiTEyME 713 (996)
T KOG0196|consen 673 ---------------------------------QRRDFLSEASIMGQFD-----HPNIIRLEGVV-TKSKPVMIITEYME 713 (996)
T ss_pred ---------------------------------HHhhhhhhhhhcccCC-----CCcEEEEEEEE-ecCceeEEEhhhhh
Confidence 3458999998877663 3443 444444 34566799999999
Q ss_pred CCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHH
Q 004115 426 GIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE 503 (773)
Q Consensus 426 G~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~ 503 (773)
.++|+.+.......+..-++... ++.+.++.+-..|++|||+-.-||||+. +-..++.|||+.+.+.+..-..+..
T Consensus 714 NGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsDFGLSRvledd~~~~ytt 791 (996)
T KOG0196|consen 714 NGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAYTT 791 (996)
T ss_pred CCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEeccccceeecccCCCccccc
Confidence 99999987665555555555544 5777899999999999999999999985 6688999999999885544222211
Q ss_pred HHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 504 AFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 504 l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
. + -.=-....+++.+.....+...|++++.-
T Consensus 792 ~--G-GKIPiRWTAPEAIa~RKFTsASDVWSyGI 822 (996)
T KOG0196|consen 792 L--G-GKIPIRWTAPEAIAYRKFTSASDVWSYGI 822 (996)
T ss_pred c--C-CccceeecChhHhhhcccCchhhccccce
Confidence 0 0 00012334555666666677778877664
No 370
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.10 E-value=4.5e-10 Score=115.91 Aligned_cols=118 Identities=17% Similarity=0.168 Sum_probs=78.4
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 492 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~ 492 (773)
...+++|||++|++|.++... ....+...+...+.+ ..+..+|..|++|+|+||.||+++. ++.++++|||....
T Consensus 58 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~ 134 (237)
T cd05576 58 DSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSE 134 (237)
T ss_pred CeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhc
Confidence 457999999999999886432 223444443333322 3467889999999999999999986 78999999998766
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 493 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 493 Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+....... .....+++++....+...+..|.+++...+++++.
T Consensus 135 ~~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 135 VEDSCDGE---------AVENMYCAPEVGGISEETEACDWWSLGAILFELLT 177 (237)
T ss_pred cccccccC---------CcCccccCCcccCCCCCCchhhHHHHHHHHHHHHH
Confidence 54421110 11222344444443444566799998877766553
No 371
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.10 E-value=3e-10 Score=125.99 Aligned_cols=178 Identities=19% Similarity=0.152 Sum_probs=113.3
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+-+|+|.||.||+|.++++.||||+..+.-.+....+-+|.. .. .
T Consensus 216 eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~---------------------------------lp--~ 260 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS---------------------------------LP--G 260 (534)
T ss_pred HHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh---------------------------------cc--C
Confidence 468999999999999999999999975433333222221111 11 2
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh----
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS---- 459 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~---- 459 (773)
.+..|+.+|-..-+... ....+.+||+||.+-++|.|+.. ..-++-..+.+.+ +..-+..+|+
T Consensus 261 m~h~nIl~Fi~~ekr~t---------~~~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~ 329 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRGT---------ADRMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPR 329 (534)
T ss_pred ccchhHHHhhchhccCC---------ccccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCc
Confidence 23446666643222111 11235689999999999999854 3334444333222 2223566663
Q ss_pred -----CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 460 -----HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 460 -----~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
.++.|||+|..||||.. |+..++.|||++-++++..-..-. +.--+...+|++++++-.+-.. |..+
T Consensus 330 ~d~~Kp~IaHRDlkSkNVLvK~--DlTccIaDFGLAl~~~p~~~~~d~----~~qVGT~RYMAPEvLEgainl~--d~~A 401 (534)
T KOG3653|consen 330 GDHHKPPIAHRDLKSKNVLVKN--DLTCCIADFGLALRLEPGKPQGDT----HGQVGTRRYMAPEVLEGAINLQ--DRDA 401 (534)
T ss_pred CCCCCCccccccccccceEEcc--CCcEEeeccceeEEecCCCCCcch----hhhhhhhhhcCHHHHhhhcccc--cHHH
Confidence 46999999999999985 999999999999999865433221 1134677889999887543222 2445
Q ss_pred HHH
Q 004115 535 VRR 537 (773)
Q Consensus 535 l~~ 537 (773)
|++
T Consensus 402 fkr 404 (534)
T KOG3653|consen 402 FKR 404 (534)
T ss_pred HHH
Confidence 544
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.10 E-value=3.4e-10 Score=122.82 Aligned_cols=186 Identities=17% Similarity=0.126 Sum_probs=109.5
Q ss_pred ccccccceeEEEEEee--c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.||+|++|.||+|+. . |..||||+.+...... .. .
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~------~ 45 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK----------------------------------IL------A 45 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc----------------------------------hh------H
Confidence 5799999999999998 4 7799999874221110 00 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFW------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESY 453 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~------e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~ 453 (773)
-++.+|...+.++. ++++ +++.+. ......+++|||+++ +|.++.. ....++...+...+ +...
T Consensus 46 ~~~~~E~~~l~~l~----~h~~--iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~a 117 (332)
T cd07857 46 KRALRELKLLRHFR----GHKN--ITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCG 117 (332)
T ss_pred HHHHHHHHHHHHhc----CCCC--hheeeeeeeeccccCCcEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 12334444444442 2222 222221 112346899999875 6666532 12234444433333 2334
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCh
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDT 532 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~ 532 (773)
+..+|..|++|+|+||+||++++ ++.++|+|||++..++......... ..-..++..+++++....+ ......|.
T Consensus 118 L~~LH~~givH~dlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 118 LKYIHSANVLHRDLKPGNLLVNA--DCELKICDFGLARGFSENPGENAGF--MTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred HHHHHhCCcccCCCCHHHeEEcC--CCCEEeCcCCCceeccccccccccc--ccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 78899999999999999999986 7899999999998776432211000 0001233345555544322 23455788
Q ss_pred HHHHHHHHHHH
Q 004115 533 TAVRRTAQFFL 543 (773)
Q Consensus 533 ~~l~~~i~~~l 543 (773)
+++...+.+++
T Consensus 194 ~slGv~l~~l~ 204 (332)
T cd07857 194 WSVGCILAELL 204 (332)
T ss_pred HHHHHHHHHHH
Confidence 88887666554
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.09 E-value=5.5e-10 Score=131.15 Aligned_cols=144 Identities=17% Similarity=0.225 Sum_probs=101.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|.+|+||+++. +|+.+||||+.|+.....+..++
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~e--------------------------------------- 65 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELE--------------------------------------- 65 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHH---------------------------------------
Confidence 4688899999998887 79999999998876544221111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHHH--HH
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESY--LE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~-l~~~~~d~~~la~~li~~~--l~ 455 (773)
.|+-++. .+++++..-.-+. .-..+.|||||||.|+++.|+.. +.....+...++..+.+.+ +.
T Consensus 66 -----ynil~~~---~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~ 137 (953)
T KOG0587|consen 66 -----YNMLKKY---SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLA 137 (953)
T ss_pred -----HHHHHhc---cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHH
Confidence 1333332 2333332211111 22356799999999999999754 2233355666777666655 56
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR 498 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r 498 (773)
++|.+.++|+|+|-.|||++. ++.++|+|||...+++....
T Consensus 138 HLH~nkviHRDikG~NiLLT~--e~~VKLvDFGvSaQldsT~g 178 (953)
T KOG0587|consen 138 HLHNNKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDSTVG 178 (953)
T ss_pred HHhhcceeeecccCceEEEec--cCcEEEeeeeeeeeeecccc
Confidence 677888999999999999996 89999999999999987543
No 374
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.09 E-value=8.5e-10 Score=119.51 Aligned_cols=187 Identities=14% Similarity=0.102 Sum_probs=108.0
Q ss_pred ccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 004115 310 AASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQE 387 (773)
Q Consensus 310 saSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~E 387 (773)
.|++++||+|.+ +|+.||||+....-... +..+ .+..|
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~------~~~~e 49 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTE----------------------------------EHLK------ALQNE 49 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCH----------------------------------HHHH------HHHHH
Confidence 349999999998 69999999874321100 0001 22333
Q ss_pred HHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCCc
Q 004115 388 AANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFF 463 (773)
Q Consensus 388 A~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~Gff 463 (773)
+.-+. .+. +++| .+..++ ......+++|||++|+++.++.... ..+.+...+...+ +...+..+|..|++
T Consensus 50 ~~~~~----~l~-h~niv~~~~~~-~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 50 VVLSH----FFR-HPNIMTSWTVF-TTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred HHHHH----hCC-CCCcceEeeeE-ecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 32222 222 3433 333333 3345679999999999998865322 2234444433322 22346788999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccChhh-HHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI-REGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~-r~~l~~l~~al~~~D~~~i~~~l~~lG--~~~~~~D~~~l~~~i~ 540 (773)
|+|++|.||++.. ++.+++.|||.+....... ........-........++.++....+ -..+..|++++...+.
T Consensus 124 HrDlkp~Nill~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~ 201 (328)
T cd08226 124 HRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITAC 201 (328)
T ss_pred cCCCCHHHEEEeC--CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 9999999999985 7899999998654432211 000000000000112235556655432 2356789999988777
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 202 el~~ 205 (328)
T cd08226 202 ELAT 205 (328)
T ss_pred HHHh
Confidence 6653
No 375
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.08 E-value=3.9e-11 Score=145.01 Aligned_cols=184 Identities=17% Similarity=0.134 Sum_probs=116.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||.|-||+||.|.. +|+-.|||-.+-...+ .+..| .+.
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~----------------~k~~~------------------~i~---- 1282 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD----------------HKTFK------------------LIA---- 1282 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc----------------cccCc------------------chH----
Confidence 5699999999999998 6999999854210000 00111 011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~---la~~li~~~l~qI~~~ 460 (773)
.|.+.++.+ .+|++.-|..+.-...+.+|-||||+|++|.++.+... ..... +....+...+..+|++
T Consensus 1283 --eEm~vlE~l-----nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1283 --EEMKVLEGL-----NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred --HHHHHHHhc-----cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc
Confidence 122333333 23555555555555566789999999999999764332 22221 2222233446678999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRR 537 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~---~~~~~D~~~l~~ 537 (773)
|++||||||.||+++. +|-|++.|||.+..+...... +-.-+.. ..+.+.+|+++.+--.- .....|++++.-
T Consensus 1354 gIVHRDIK~aNI~Ld~--~g~iK~~DFGsa~ki~~~~~~-~~~el~~-~~GT~~YMAPEvit~t~~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1354 GIVHRDIKPANILLDF--NGLIKYGDFGSAVKIKNNAQT-MPGELQS-MMGTPMYMAPEVITGTKGKGHGGAADIWSLGC 1429 (1509)
T ss_pred CceecCCCccceeeec--CCcEEeecccceeEecCchhc-CCHHHHh-hcCCchhcCchhhcccccCCCCcchhhhcccc
Confidence 9999999999999986 789999999999998776321 1111122 35788899988874321 123357787765
Q ss_pred HHH
Q 004115 538 TAQ 540 (773)
Q Consensus 538 ~i~ 540 (773)
.+-
T Consensus 1430 VVl 1432 (1509)
T KOG4645|consen 1430 VVL 1432 (1509)
T ss_pred eEE
Confidence 543
No 376
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.08 E-value=2.7e-10 Score=128.62 Aligned_cols=186 Identities=20% Similarity=0.188 Sum_probs=128.0
Q ss_pred ccccccceeEEEEEeec-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||+|-||.||.+... +..||||..||+..+.- --||
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~-----------------------------------------r~~F 582 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA-----------------------------------------RNDF 582 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhH-----------------------------------------HHHH
Confidence 67999999999999995 49999999999864321 1378
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC-CCHHHHHHHH--HHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYA--VESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~-~d~~~la~~l--i~~~l~qI~~~G 461 (773)
..|++.+.+++ +..-|.+--|.- -....+++|||++.+.|+++....... .+........ +.+.++.+-..+
T Consensus 583 ~kEIkiLsqLk----hPNIveLvGVC~-~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n 657 (807)
T KOG1094|consen 583 LKEIKILSRLK----HPNIVELLGVCV-QDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN 657 (807)
T ss_pred HHHHHHHhccC----CCCeeEEEeeee-cCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc
Confidence 88888887763 322222222211 124568999999999999975433222 2333333333 334467777899
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH-HHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l-~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
|+|||+-|-|+|++. ++.++++||||++.+=...-... .+.+ --...++-+.+-+|..+...|.+++...+.
T Consensus 658 fVHrd~a~rNcLv~~--e~~iKiadfgmsR~lysg~yy~vqgr~v-----lpiRwmawEsillgkFttaSDvWafgvTlw 730 (807)
T KOG1094|consen 658 FVHRDLATRNCLVDG--EFTIKIADFGMSRNLYSGDYYRVQGRAV-----LPIRWMAWESILLGKFTTASDVWAFGVTLW 730 (807)
T ss_pred hhhccccccceeecC--cccEEecCcccccccccCCceeeeccee-----eeeeehhHHHHHhccccchhhhhhhHHHHH
Confidence 999999999999985 88999999999996532211110 0000 123566677777899899999999998887
Q ss_pred HHHH
Q 004115 541 FFLN 544 (773)
Q Consensus 541 ~~l~ 544 (773)
+++.
T Consensus 731 E~~~ 734 (807)
T KOG1094|consen 731 EVFM 734 (807)
T ss_pred HHHH
Confidence 6654
No 377
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.07 E-value=1.4e-10 Score=132.93 Aligned_cols=187 Identities=17% Similarity=0.174 Sum_probs=128.1
Q ss_pred ccccccceeEEEEEee---cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL---KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l---~G~--~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+-||+||||.||||.+ .|+ .||||..+++....+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~----------------------------------------- 154 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI----------------------------------------- 154 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh-----------------------------------------
Confidence 4589999999999999 354 699999988754320
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQI 457 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~~~d~~~la~~li~~~--l~qI 457 (773)
--||++|+..|-++++- .-|+.--|+ +.....||||.+++++|-|.... ....+--..+...+.+.. +.++
T Consensus 155 mddflrEas~M~~L~H~----hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL 228 (1039)
T KOG0199|consen 155 MDDFLREASHMLKLQHP----HLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL 228 (1039)
T ss_pred HHHHHHHHHHHHhccCc----ceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH
Confidence 12799999988877541 123333333 33667899999999999885432 222223334444333333 4556
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
-..+++|||+-.-|+++-. ...++++|||+++.|...+-... +..-..=-+..++++.+..+......|++.+..
T Consensus 229 eskrlvHRDLAARNlllas--prtVKI~DFGLmRaLg~ned~Yv---m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGV 303 (1039)
T KOG0199|consen 229 ESKRLVHRDLAARNLLLAS--PRTVKICDFGLMRALGENEDMYV---MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGV 303 (1039)
T ss_pred hhhhhhhhhhhhhhheecc--cceeeeecccceeccCCCCcceE---ecCCCcCcccccCHhHhccccccccchhhhhhh
Confidence 6899999999999999975 67899999999999976543211 111111235667888888888888899999888
Q ss_pred HHHHHHH
Q 004115 538 TAQFFLN 544 (773)
Q Consensus 538 ~i~~~l~ 544 (773)
.+-+++.
T Consensus 304 TiWEMFt 310 (1039)
T KOG0199|consen 304 TIWEMFT 310 (1039)
T ss_pred hHHhhhc
Confidence 7766553
No 378
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.07 E-value=5.4e-10 Score=121.54 Aligned_cols=182 Identities=15% Similarity=0.185 Sum_probs=109.8
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.++||.|++|.||+|+. +|+.||||......... .. .-
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~------~~ 54 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP----------------------------------VL------AK 54 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEeccccccc----------------------------------ch------hH
Confidence 37899999999999997 68999999764321100 00 11
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhC
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSH 460 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~ 460 (773)
++..|...+.++. +..-+.+...+.......+++|||+.+ ++.++.. ........+... .+...+..+|..
T Consensus 55 ~~~~E~~~l~~l~----hpniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~ 127 (328)
T cd07856 55 RTYRELKLLKHLR----HENIISLSDIFISPLEDIYFVTELLGT-DLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSA 127 (328)
T ss_pred HHHHHHHHHHhcC----CCCeeeEeeeEecCCCcEEEEeehhcc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2334444444432 222233444443334567999999854 6766532 222232222211 233446789999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i 539 (773)
|++|+|++|.||++++ ++.++++|||++...+...... ..+...+.++.... ....+..|.+++...+
T Consensus 128 ~iiH~dl~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il 196 (328)
T cd07856 128 GVVHRDLKPSNILINE--NCDLKICDFGLARIQDPQMTGY---------VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIF 196 (328)
T ss_pred CcccCCCCHHHEeECC--CCCEEeCccccccccCCCcCCC---------cccccccCceeeeccCCcCcHHHHHHHHHHH
Confidence 9999999999999985 7899999999988765432111 12233444443322 2344557888888776
Q ss_pred HHHHH
Q 004115 540 QFFLN 544 (773)
Q Consensus 540 ~~~l~ 544 (773)
++++.
T Consensus 197 ~el~t 201 (328)
T cd07856 197 AEMLE 201 (328)
T ss_pred HHHHh
Confidence 66553
No 379
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.07 E-value=3.4e-10 Score=122.08 Aligned_cols=184 Identities=18% Similarity=0.173 Sum_probs=107.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.|+||+..+..... +..+ .
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~------~ 45 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL----------------------------------IDAK------R 45 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc----------------------------------hhhh------h
Confidence 6799999999999998 58999999875432100 0001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 456 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~q 456 (773)
+..|...+..+. +++ +.+..++.. -....+++|||+++ .+.++.... ..++...+...+ +...+..
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~ 118 (330)
T cd07834 46 ILREIKLLRHLR-----HENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQILRGLKY 118 (330)
T ss_pred HHHHHHHHHhcC-----CcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 223333333322 111 111111111 11356999999986 566653221 123333332222 2334678
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHH--HHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCChH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIRE--GLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTT 533 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~--~l~~l~~al~~~D~~~i~~~l~~lG-~~~~~~D~~ 533 (773)
+|..|++|+|+||+||+++. ++.++|+|||++......... ..... ..+..+++++..... ......|++
T Consensus 119 LH~~gi~H~dlkp~nili~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~sDi~ 191 (330)
T cd07834 119 LHSANVIHRDLKPSNILVNS--NCDLKICDFGLARGVDPDEDEKGFLTEY-----VVTRWYRAPELLLSSSRYTKAIDIW 191 (330)
T ss_pred HHhCCeecCCCCHHHEEEcC--CCCEEEcccCceEeeccccccccccccc-----ccccCcCCceeeecccCCCcchhHH
Confidence 99999999999999999986 799999999999987664311 01000 112223344433333 445567888
Q ss_pred HHHHHHHHHH
Q 004115 534 AVRRTAQFFL 543 (773)
Q Consensus 534 ~l~~~i~~~l 543 (773)
++...+.+++
T Consensus 192 slG~il~~l~ 201 (330)
T cd07834 192 SVGCIFAELL 201 (330)
T ss_pred HHHHHHHHHH
Confidence 8887666554
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.07 E-value=8.1e-10 Score=114.61 Aligned_cols=121 Identities=10% Similarity=0.050 Sum_probs=78.3
Q ss_pred CCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeec
Q 004115 414 TTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 488 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l---~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFG 488 (773)
....+++|||++|.++.++... .....+...+...+ +...+..+|..|++|+|++|.||+++ ++.++++|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeecccC
Confidence 3457899999999999876432 11223433333222 22346789999999999999999996 4679999999
Q ss_pred ceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 489 MMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 489 lv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.+..+...... .....+.+.++.++...........|.+++...+.+++
T Consensus 151 ~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 151 VSRLLMGSCDL------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred ceeecCCCccc------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 88766432210 01122344455565554444455678888887665544
No 381
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.07 E-value=1.5e-09 Score=116.07 Aligned_cols=188 Identities=14% Similarity=0.078 Sum_probs=111.1
Q ss_pred ccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQE 387 (773)
Q Consensus 308 IgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~E 387 (773)
+|.++++.|++++.+|+.||||+.+.+.... +-.. .+..|
T Consensus 10 ~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~------~~~~E 49 (314)
T cd08216 10 FEDLMIVHLAKHKPTNTLVAVKKINLDSCSK----------------------------------EDLK------LLQQE 49 (314)
T ss_pred hcCCceEEEEEecCCCCEEEEEEEeccccch----------------------------------hHHH------HHHHH
Confidence 4566777778877789999999875331100 0001 23334
Q ss_pred HHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHHHHHHhCCCc
Q 004115 388 AANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYLEQILSHGFF 463 (773)
Q Consensus 388 A~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l~qI~~~Gff 463 (773)
...+.++. ++++ .+..++ ......+++|||++|+++.++.... ..+.+...+...+ +-..+..+|..|++
T Consensus 50 i~~l~~l~-----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~iv 123 (314)
T cd08216 50 IITSRQLQ-----HPNILPYVTSF-IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFI 123 (314)
T ss_pred HHHHHhcC-----Ccchhhhhhee-ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44444332 1222 222222 3345679999999999998875422 2234444333322 23346788999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCChHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~-l~~l~~al~~~D~~~i~~~l~~lG--~~~~~~D~~~l~~~i~ 540 (773)
|+|++|+||+++. ++.+++.|||.+..+....... ...........+..++++++.... ...+..|++++...+.
T Consensus 124 H~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~ 201 (314)
T cd08216 124 HRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITAC 201 (314)
T ss_pred cCCCCcceEEEec--CCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHH
Confidence 9999999999986 7899999999887664322110 000000111233445566665432 2345689999987766
Q ss_pred HHH
Q 004115 541 FFL 543 (773)
Q Consensus 541 ~~l 543 (773)
+++
T Consensus 202 el~ 204 (314)
T cd08216 202 ELA 204 (314)
T ss_pred HHH
Confidence 554
No 382
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.07 E-value=6.5e-10 Score=121.01 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=108.6
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.++||.|++|.||+|+. +|+.||||..++...... + ..
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~--------------------------~--------------~~ 49 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI--------------------------D--------------AK 49 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccc--------------------------h--------------hH
Confidence 36899999999999998 689999998754321110 0 00
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeee----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFW----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLE 455 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~----e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~ 455 (773)
.+..|...+..+.+ +++ .+..++. +.....+++|||++| .|.++... ...++...+...+ +-..+.
T Consensus 50 ~~~~E~~~l~~l~h-----~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~ 122 (337)
T cd07858 50 RTLREIKLLRHLDH-----ENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRS-SQTLSDDHCQYFLYQLLRGLK 122 (337)
T ss_pred HHHHHHHHHHhcCC-----CCccchHHheecccccccCcEEEEEeCCCC-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence 11223333333211 111 1111111 111346999999975 56654322 1223433333332 223467
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTA 534 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~ 534 (773)
.+|..|++|+|++|.||+++. ++.++|+|||++........ ... .......+++++.... +......|.++
T Consensus 123 ~LH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~--~~~----~~~~~~~y~aPE~~~~~~~~~~~~Diws 194 (337)
T cd07858 123 YIHSANVLHRDLKPSNLLLNA--NCDLKICDFGLARTTSEKGD--FMT----EYVVTRWYRAPELLLNCSEYTTAIDVWS 194 (337)
T ss_pred HHHhCCEecCCCCHHHEEEcC--CCCEEECcCccccccCCCcc--ccc----ccccccCccChHHHhcCCCCCCcccHHH
Confidence 899999999999999999985 78999999999887654321 000 0112333455554432 34566789999
Q ss_pred HHHHHHHHH
Q 004115 535 VRRTAQFFL 543 (773)
Q Consensus 535 l~~~i~~~l 543 (773)
+...+.+++
T Consensus 195 lG~il~~l~ 203 (337)
T cd07858 195 VGCIFAELL 203 (337)
T ss_pred HHHHHHHHH
Confidence 987766654
No 383
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.05 E-value=2.2e-09 Score=112.52 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=54.6
Q ss_pred CCeEEEEeecCCCChhhhhhhhhc---CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecc
Q 004115 415 TPQILTMEYVPGIKINRIQSLDEL---GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 489 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~---~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGl 489 (773)
...++||||++|++|.++...... ..+...+...+ +...+..+|..|++|+|+||.||+++. ++.++++|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEeccccc
Confidence 456999999999999886532211 11212121111 233467889999999999999999985 78999999998
Q ss_pred eec
Q 004115 490 MGS 492 (773)
Q Consensus 490 v~~ 492 (773)
+..
T Consensus 146 ~~~ 148 (268)
T cd05086 146 GPS 148 (268)
T ss_pred ccc
Confidence 764
No 384
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.05 E-value=7.5e-10 Score=120.89 Aligned_cols=120 Identities=15% Similarity=0.124 Sum_probs=72.4
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 416 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 416 ~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
..+++|||+++ .+.++.. ........+... .+-..+..+|..|++|+|+||+||+++. .++.++++|||++..+
T Consensus 90 ~~~lv~e~~~~-~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-~~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYMET-DLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-EDLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeecccc-cHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCceEEECCcccceec
Confidence 35899999986 6665432 122333322222 2333467889999999999999999974 3567999999999876
Q ss_pred ChhhHHH-HHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHHHHHHHHHH
Q 004115 494 SPNIREG-LLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 494 s~~~r~~-l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l~~~i~~~l 543 (773)
....... ... ...+...+++++...- .......|.+++...+.+++
T Consensus 166 ~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 166 DPHYSHKGYLS----EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred CCccccccccc----cccccccccCHHHHhCccccCchhhHHHHHHHHHHHH
Confidence 5432110 000 0011223444554322 22345679999987776654
No 385
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1e-09 Score=122.23 Aligned_cols=186 Identities=19% Similarity=0.205 Sum_probs=117.8
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
++.||+|-|+.|-.|++ +|+.|||||...- ++| ++...
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKT-----------------------------KlD------~~st~----- 62 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKT-----------------------------KLD------TLSTG----- 62 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEeccc-----------------------------ccc------hhhhh-----
Confidence 36799999999999998 8999999997211 111 11100
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH---HHHHHHh
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES---YLEQILS 459 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~---~l~qI~~ 459 (773)
.+.+|.+.|+..+ +..-|+.-+|+ +-.++.||+.|.=+|+.|.|+.--...|+.. .+++.-+.. .+.++|.
T Consensus 63 hlfqEVRCMKLVQ----HpNiVRLYEVi-DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E-~La~kYF~QI~~AI~YCHq 136 (864)
T KOG4717|consen 63 HLFQEVRCMKLVQ----HPNIVRLYEVI-DTQTKLYLILELGDGGDLFDYIMKHEEGLNE-DLAKKYFAQIVHAISYCHQ 136 (864)
T ss_pred HHHHHHHHHHHhc----CcCeeeeeehh-cccceEEEEEEecCCchHHHHHHhhhccccH-HHHHHHHHHHHHHHHHHhh
Confidence 2334555555443 33334444454 3457889999999999999976444444432 223222221 1333567
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
-.++|||+||.|+.+-+ +-|-++|.|||+...+-|..+- ..+++-+..... +.++.-.+-.|.+|++++...+
T Consensus 137 LHVVHRDLKPENVVFFE-KlGlVKLTDFGFSNkf~PG~kL---~TsCGSLAYSAP---EILLGDsYDAPAVDiWSLGVIL 209 (864)
T KOG4717|consen 137 LHVVHRDLKPENVVFFE-KLGLVKLTDFGFSNKFQPGKKL---TTSCGSLAYSAP---EILLGDSYDAPAVDIWSLGVIL 209 (864)
T ss_pred hhhhcccCCcceeEEee-ecCceEeeeccccccCCCcchh---hcccchhhccCc---hhhhcCccCCcchhhhHHHHHH
Confidence 78999999999997764 4799999999999988776542 222332222222 2233334556778999999877
Q ss_pred HHHH
Q 004115 540 QFFL 543 (773)
Q Consensus 540 ~~~l 543 (773)
+.++
T Consensus 210 yMLV 213 (864)
T KOG4717|consen 210 YMLV 213 (864)
T ss_pred HHHH
Confidence 6554
No 386
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.05 E-value=9e-10 Score=119.64 Aligned_cols=189 Identities=16% Similarity=0.114 Sum_probs=109.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|.. +|+.||||......... .. .-.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~~-----------~~~ 52 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-----------------------------TD-----------AQR 52 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-----------------------------hh-----------hhh
Confidence 6799999999999998 58999999763211100 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~~ 459 (773)
+..|...+.++. ++++ +.+..++... ....++||||++| .|.++.... ..+....... .+...+..+|.
T Consensus 53 ~~~E~~~l~~l~----~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~ 125 (337)
T cd07852 53 TFREIMFLQELG----DHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHS 125 (337)
T ss_pred hhHHHHHHHHhc----CCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 234444444441 2232 2222222221 2246999999986 676653221 2332222222 22344678999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~-~lG~~~~~~D~~~l~~~ 538 (773)
.|++|+|++|.||+++. ++.++++|||++..+.......-.... .-..+...++.++.. ..+......|.+++...
T Consensus 126 ~~i~H~dl~p~nill~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~ 202 (337)
T cd07852 126 GNVIHRDLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVL-TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI 202 (337)
T ss_pred CCeecCCCCHHHEEEcC--CCcEEEeeccchhccccccccccCcch-hcccccccccCceeeeccccccccchHHHHHHH
Confidence 99999999999999986 899999999999877543221000000 001123334444432 22344566899999887
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
+.+++.
T Consensus 203 l~el~t 208 (337)
T cd07852 203 LGEMLL 208 (337)
T ss_pred HHHHHh
Confidence 776653
No 387
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=4.8e-10 Score=119.27 Aligned_cols=192 Identities=17% Similarity=0.167 Sum_probs=130.4
Q ss_pred hhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004115 300 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 376 (773)
Q Consensus 300 F~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 376 (773)
.++||- +.+|.|.||.|-.++- +|+.+|+||.+..+--. . +|++.
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia--k------------------------------dEVAH 214 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA--K------------------------------DEVAH 214 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee--h------------------------------HHhhh
Confidence 345664 7899999999999887 69999999986543211 0 12221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHHHHHH
Q 004115 377 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLE 455 (773)
Q Consensus 377 ~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~~~~~d~~~la~~li~~~l~ 455 (773)
. ..|-+.+...++ |.+..-+.-.+-..+.+.||||+.|+.|.- +...+-...++.++...-+-..+.
T Consensus 215 T-------lTE~RVL~~~~H-----PFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~ 282 (516)
T KOG0690|consen 215 T-------LTENRVLQNCRH-----PFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALG 282 (516)
T ss_pred h-------hhHHHHHHhccC-----cHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhh
Confidence 1 123333333222 111111111122345799999999998864 333333455677777777778899
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 534 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~-Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~ 534 (773)
.+|..+++.||+|-.|++++. ||.|++.|||+++. ++.... ...+.+.+++++++.++-.-....+|-+.
T Consensus 283 YLHs~~ivYRDlKLENLlLDk--DGHIKitDFGLCKE~I~~g~t-------~kTFCGTPEYLAPEVleDnDYgraVDWWG 353 (516)
T KOG0690|consen 283 YLHSRNIVYRDLKLENLLLDK--DGHIKITDFGLCKEEIKYGDT-------TKTFCGTPEYLAPEVLEDNDYGRAVDWWG 353 (516)
T ss_pred hhhhCCeeeeechhhhheecc--CCceEeeecccchhcccccce-------eccccCChhhcCchhhccccccceeehhh
Confidence 999999999999999999986 99999999999985 332211 12246799999999988766667788888
Q ss_pred HHHHHHHHHH
Q 004115 535 VRRTAQFFLN 544 (773)
Q Consensus 535 l~~~i~~~l~ 544 (773)
+...+++++-
T Consensus 354 ~GVVMYEMmC 363 (516)
T KOG0690|consen 354 VGVVMYEMMC 363 (516)
T ss_pred hhHHHHHHHh
Confidence 8887777653
No 388
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.04 E-value=1.3e-09 Score=118.87 Aligned_cols=141 Identities=23% Similarity=0.307 Sum_probs=95.2
Q ss_pred cccccccceeEEEEEee-c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL-K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l-~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
...||+|+||+||.+.. . .+.+|+|+........ . ..+..|
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----------------------------~--------~~l~~E 66 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----------------------------P--------SVLKIE 66 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----------------------------C--------ccchhH
Confidence 47899999999999998 3 2589999874321110 0 011122
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeecc-CC--CeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHH--HH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TT--PQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY--LE 455 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st--~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~--l~ 455 (773)
.+ .+..+.. ....-.+|.+++.. .+ -+++||+.+ |.+|.++..... ..+........+++.. ++
T Consensus 67 ~~------vl~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~ 136 (322)
T KOG1164|consen 67 IQ------VLKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALE 136 (322)
T ss_pred HH------HHHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHH
Confidence 22 2222222 12235678888755 22 469999998 889999764332 4456666666655544 89
Q ss_pred HHHhCCCccCCCCCCceEEeccC---CCcEEEEeeccee
Q 004115 456 QILSHGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMG 491 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~---~g~I~LlDFGlv~ 491 (773)
.+|+.||+|||+||+|+++.... ...+.++|||+++
T Consensus 137 ~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 137 DLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 99999999999999999997521 1469999999999
No 389
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.03 E-value=1e-09 Score=119.25 Aligned_cols=187 Identities=19% Similarity=0.171 Sum_probs=109.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|++|.||+|+. +|+.||+|+........ +... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~----------------------------------~~~~------~ 50 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP----------------------------------TLAK------R 50 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc----------------------------------cchH------H
Confidence 6799999999999998 69999999874321100 0000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeec---cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWE---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e---~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
+..|...+.++. +++ +.+..++.. .....+++|||+.| .+.++.... ...+...+...+ +...+..+
T Consensus 51 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~L 123 (334)
T cd07855 51 TLRELKILRHFK-----HDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYI 123 (334)
T ss_pred HHHHHHHHHhcC-----CCCccCHHHhccccCCCCceEEEEEehhhh-hHHHHhccC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 223433333332 122 222222221 12346999999976 666654222 223333333322 33447788
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVR 536 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~ 536 (773)
|..|++|+|++|.||++++ ++.++++|||++..+........ ... .-..+...++.++... .+......|++++.
T Consensus 124 H~~~ivH~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~-~~~-~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG 199 (334)
T cd07855 124 HSANVIHRDLKPSNLLVNE--DCELRIGDFGMARGLSSSPTEHK-YFM-TEYVATRWYRAPELLLSLPEYTTAIDMWSVG 199 (334)
T ss_pred HHCCeecCCCCHHHEEEcC--CCcEEecccccceeecccCcCCC-ccc-ccccccccccChHHhcCCcccccccchHHHH
Confidence 9999999999999999986 89999999999877643221100 000 0001222344444432 23456678999998
Q ss_pred HHHHHHH
Q 004115 537 RTAQFFL 543 (773)
Q Consensus 537 ~~i~~~l 543 (773)
..+++++
T Consensus 200 ~~l~el~ 206 (334)
T cd07855 200 CIFAEML 206 (334)
T ss_pred HHHHHHH
Confidence 7766654
No 390
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.02 E-value=7.7e-10 Score=126.08 Aligned_cols=182 Identities=18% Similarity=0.197 Sum_probs=121.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||+|.||.|-.|++ +|.+||||+....- .|..... .+
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~-----------------------------ln~~~~~-----k~----- 102 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ-----------------------------LNPSKRQ-----KL----- 102 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcc-----------------------------cChHHHH-----HH-----
Confidence 5699999999999998 79999999873211 1111111 12
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l---i~~~l~qI~~ 459 (773)
.+|.+-|..+ ++|+| .+-.|+ +.....||||||+-|+.+.++.. +.+-+.+..++.. +-..++.+|.
T Consensus 103 -~rev~imk~l-----~HPnIvkl~~v~-~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~ 173 (596)
T KOG0586|consen 103 -GREVDIMKSL-----NHPNIVKLFSVI-ETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHS 173 (596)
T ss_pred -HHHHHHHHhc-----CCcceeeeeeee-eecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhh
Confidence 2233333322 22333 344444 23455699999999999988743 3333333444443 2345788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCChHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRT 538 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~-lG~~~~~~D~~~l~~~ 538 (773)
++|+|+|+|..||+++. +-.+++.|||+...++... +. .-..+.+.++++++.. .....|..|.+.+...
T Consensus 174 k~ivHrdLk~eNilL~~--~mnikIaDfgfS~~~~~~~---~l----qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvv 244 (596)
T KOG0586|consen 174 KNIVHRDLKAENILLDE--NMNIKIADFGFSTFFDYGL---ML----QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVV 244 (596)
T ss_pred cceeccccchhhccccc--ccceeeeccccceeecccc---cc----cccCCCCCccChHhhcCcccCCcceehhhhhhh
Confidence 99999999999999985 6679999999999987532 22 2235677788877764 4566788899999887
Q ss_pred HHHHHH
Q 004115 539 AQFFLN 544 (773)
Q Consensus 539 i~~~l~ 544 (773)
++-++.
T Consensus 245 ly~LV~ 250 (596)
T KOG0586|consen 245 LYALVE 250 (596)
T ss_pred heeeee
Confidence 766543
No 391
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.02 E-value=1.4e-09 Score=115.94 Aligned_cols=192 Identities=15% Similarity=0.104 Sum_probs=107.3
Q ss_pred ccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
..||+|++|.||+|+. +|+.||||+..+..... +.+...
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~---------------------------------~~~~~~---- 48 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY---------------------------------TGISQS---- 48 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc---------------------------------cCccHH----
Confidence 4699999999999998 37899999986543100 000011
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhh-hhh---cCCCHHHHHHHH--HHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQS-LDE---LGVDRKRLGRYA--VESYL 454 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~-l~~---~~~d~~~la~~l--i~~~l 454 (773)
+.+|+.-+.++. +..-+.+...+..- ....++||||+++. +.++.. ... ..+....+...+ +...+
T Consensus 49 --~~~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 121 (316)
T cd07842 49 --ACREIALLRELK----HENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGV 121 (316)
T ss_pred --HHHHHHHHHhcC----CCCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHH
Confidence 123333333332 21222333333221 14579999999874 443321 111 122333322222 33447
Q ss_pred HHHHhCCCccCCCCCCceEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCC
Q 004115 455 EQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGD 531 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~--~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D 531 (773)
..+|..|++|+|++|.||+++. ..++.++++|||++..+.......... .-......+++++...- .......|
T Consensus 122 ~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~D 198 (316)
T cd07842 122 HYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADL---DPVVVTIWYRAPELLLGARHYTKAID 198 (316)
T ss_pred HHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccccccc---CCccccccccCHHHHhCCCCCCcHHH
Confidence 7889999999999999999973 115789999999988765432210000 00011223445554432 22345678
Q ss_pred hHHHHHHHHHHHH
Q 004115 532 TTAVRRTAQFFLN 544 (773)
Q Consensus 532 ~~~l~~~i~~~l~ 544 (773)
++++...+.+++.
T Consensus 199 v~slG~~l~~l~~ 211 (316)
T cd07842 199 IWAIGCIFAELLT 211 (316)
T ss_pred HHHHHHHHHHHHh
Confidence 9998877666543
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2.7e-10 Score=118.82 Aligned_cols=89 Identities=18% Similarity=0.220 Sum_probs=64.4
Q ss_pred HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004115 450 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 529 (773)
Q Consensus 450 i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~ 529 (773)
+-..++.+|..|++|||+||||++|+. +-.++++|||+++.-+++++.++..=+..-.-+-+ +.+....-.+..
T Consensus 165 ILRGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAP----EiLMGaRhYs~A 238 (449)
T KOG0664|consen 165 ILRGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAP----ELLMGARRYTGA 238 (449)
T ss_pred HHhhhHHHhhcchhhccCCCccEEecc--CceEEecccccccccchhhhhhhHHHHHHHHhccH----HHhhcchhhcCc
Confidence 334578899999999999999999985 67899999999999988888777655444333333 333223334556
Q ss_pred CChHHHHHHHHHHHH
Q 004115 530 GDTTAVRRTAQFFLN 544 (773)
Q Consensus 530 ~D~~~l~~~i~~~l~ 544 (773)
.|++++.-...+++.
T Consensus 239 vDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 239 VDIWSVGCIFAELLQ 253 (449)
T ss_pred cceehhhHHHHHHHh
Confidence 789988876666554
No 393
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=3.3e-10 Score=120.66 Aligned_cols=246 Identities=18% Similarity=0.243 Sum_probs=151.5
Q ss_pred hhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004115 296 LDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 372 (773)
Q Consensus 296 ~~eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~ 372 (773)
+.--..+|+. ..||.||++.|-.+++ +.+.+|+||.+...-. ....+||+..-+
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n-----------------------ddedidwvqtek 301 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN-----------------------DDEDIDWVQTEK 301 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC-----------------------CcccchhHHhhH
Confidence 3333456775 8899999999999999 5789999987432211 111235543211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHH
Q 004115 373 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVE 451 (773)
Q Consensus 373 E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~~~~~d~~~la~~li~ 451 (773)
. .- | .-.++|.+.--....+-.++.+.|.||++|+.|-= ....++...+..++...-+.
T Consensus 302 ~----------vf-e---------~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~ 361 (593)
T KOG0695|consen 302 H----------VF-E---------QASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIC 361 (593)
T ss_pred H----------HH-H---------hccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHH
Confidence 1 00 1 11122221111111123466799999999998863 33334444444455555566
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 530 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~-Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~ 530 (773)
..+..+|+.|++.+|+|-.|++++. .|.|+|.|+||++. +.+.+.. ..+.+.+.+++++++.-.-..-..
T Consensus 362 lal~flh~rgiiyrdlkldnvllda--eghikltdygmcke~l~~gd~t-------stfcgtpnyiapeilrgeeygfsv 432 (593)
T KOG0695|consen 362 LALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGLGPGDTT-------STFCGTPNYIAPEILRGEEYGFSV 432 (593)
T ss_pred HHHHHHhhcCeeeeeccccceEEcc--CCceeecccchhhcCCCCCccc-------ccccCCCcccchhhhcccccCcee
Confidence 7789999999999999999999985 89999999999985 4443221 234578999999988654444467
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCccCCceehhhhh
Q 004115 531 DTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVR 610 (773)
Q Consensus 531 D~~~l~~~i~~~l~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~R 610 (773)
|-+++...+-+++. .|..- +-.|...|- .+. -.-++++..+..+++|+.+. +|
T Consensus 433 dwwalgvlmfemma--------grspf----divgm~n~d----------~nt---edylfqvilekqiriprsls--vk 485 (593)
T KOG0695|consen 433 DWWALGVLMFEMMA--------GRSPF----DIVGMDNPD----------MNT---EDYLFQVILEKQIRIPRSLS--VK 485 (593)
T ss_pred hHHHHHHHHHHHHc--------CCCCc----ceecCCCcc----------cch---hHHHHHHHhhhcccccceee--hh
Confidence 88888765443332 11000 001111110 111 12366777788999999865 67
Q ss_pred cchhhccccc
Q 004115 611 AFSVLDGIGK 620 (773)
Q Consensus 611 al~~lEGi~~ 620 (773)
+..+|.|...
T Consensus 486 as~vlkgfln 495 (593)
T KOG0695|consen 486 ASHVLKGFLN 495 (593)
T ss_pred hHHHHHHhhc
Confidence 8778877654
No 394
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.01 E-value=3.9e-10 Score=111.67 Aligned_cols=141 Identities=23% Similarity=0.274 Sum_probs=95.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|.+|.|++|+. +++.||+|-.|-+-.+. .+..+..+|+.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddde----------------------------------gvpssalreic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE----------------------------------GVPSSALREIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCC----------------------------------CCcHHHHHHHH
Confidence 5799999999999998 68999999875332211 12245567888
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH---HHHHH
Q 004115 384 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY---LEQIL 458 (773)
Q Consensus 384 f~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~---l~qI~ 458 (773)
..+|.+ |+.++...+.. ..+..||.|||+. .|..+...-....|.. +++..+-.. +..+|
T Consensus 54 llkelkhknivrl~dvlhs-------------dkkltlvfe~cdq-dlkkyfdslng~~d~~-~~rsfmlqllrgl~fch 118 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLHS-------------DKKLTLVFEFCDQ-DLKKYFDSLNGDLDPE-IVRSFMLQLLRGLGFCH 118 (292)
T ss_pred HHHHhhhcceeehhhhhcc-------------CceeEEeHHHhhH-HHHHHHHhcCCcCCHH-HHHHHHHHHHhhhhhhh
Confidence 888875 66665543321 3456899999975 3333322222234443 333332222 44467
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhh
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 497 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~ 497 (773)
.+++.|||+||.|++|+. +|.+++.|||+++-+.-..
T Consensus 119 shnvlhrdlkpqnllin~--ngelkladfglarafgipv 155 (292)
T KOG0662|consen 119 SHNVLHRDLKPQNLLINR--NGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhhhhhccCCcceEEecc--CCcEEecccchhhhcCCce
Confidence 899999999999999986 8999999999998775543
No 395
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.00 E-value=1.7e-09 Score=115.77 Aligned_cols=143 Identities=18% Similarity=0.313 Sum_probs=102.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.||||..+.|+. ++++||||.- |. +-+-+.+-+|+
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfE--------------------------Pr----kS~APQLrdEY--------- 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFE--------------------------PR----KSEAPQLRDEY--------- 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEec--------------------------cc----cCCcchHHHHH---------
Confidence 5699999999999997 8999999964 11 01112222222
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~--l~qI~~ 459 (773)
++.+.+.. ...+|.||. ...-.++||||.+ |.+|.|+..+....+..+.++...++.. ++.+|+
T Consensus 75 ---------r~YKlL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~ 142 (449)
T KOG1165|consen 75 ---------RTYKLLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE 142 (449)
T ss_pred ---------HHHHHHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh
Confidence 23444443 345788874 2234569999998 8999998877777777777666555544 778999
Q ss_pred CCCccCCCCCCceEEecc---CCCcEEEEeecceecc-ChhhHH
Q 004115 460 HGFFHADPHPGNIAVDDV---NGGRLIFYDFGMMGSI-SPNIRE 499 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~---~~g~I~LlDFGlv~~L-s~~~r~ 499 (773)
+.++.||+||.|+||..+ +.+.|.++||||++.+ ++++..
T Consensus 143 k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq 186 (449)
T KOG1165|consen 143 KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ 186 (449)
T ss_pred cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence 999999999999999742 2346999999999975 455443
No 396
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.99 E-value=1.9e-09 Score=116.83 Aligned_cols=151 Identities=13% Similarity=0.139 Sum_probs=91.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||+|++|.||+|+. +|+.||||+.+.......... ....+ .....+.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~------------------------~~~~~----~~~~~~~~ 66 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK------------------------DRQLV----GMCGIHFT 66 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc------------------------chhhh----cccccchh
Confidence 5699999999999998 689999998753221110000 00000 00001223
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li--~~~l~qI~~~ 460 (773)
+.+|...+.++.+ +++ .+...+ ......+++|||++| .+.++... ............+. -..+..+|..
T Consensus 67 ~~~E~~~l~~l~h-----~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~ 138 (335)
T PTZ00024 67 TLRELKIMNEIKH-----ENIMGLVDVY-VEGDFINLVMDIMAS-DLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKW 138 (335)
T ss_pred HHHHHHHHHhCCC-----cceeeeeEEE-ecCCcEEEEEecccc-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4455554544432 222 222222 234567999999987 66665422 12233333333222 2347788999
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccC
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
|++|+|++|+||+++. ++.+++.|||++..+.
T Consensus 139 ~i~H~dl~~~nill~~--~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 139 YFMHRDLSPANIFINS--KGICKIADFGLARRYG 170 (335)
T ss_pred CeecccccHHHeEECC--CCCEEECCccceeecc
Confidence 9999999999999985 7899999999998765
No 397
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.99 E-value=7e-09 Score=109.51 Aligned_cols=180 Identities=22% Similarity=0.279 Sum_probs=122.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
++||-|-=+-||.|.. +|.+||||.-|-|-. .+.. .+.--..+... ....|..+-. ...
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk----vk~~R~y~~~~------~h~sWl~~sR---l~A------ 156 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK----VKRNRDYLADK------EHGSWLYVSR---LAA------ 156 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hhhh----hcchhhhhccc------cCcchhhhHH---HHH------
Confidence 6899999999999999 799999999988743 2111 11111111100 1112322211 112
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCcc
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFH 464 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffH 464 (773)
.+|-..+.++.. .++.||+++. -++.++||||++|..|..+.- ...+...+...+++.+-.. .+.|++|
T Consensus 157 ~rEf~~L~~L~~-----~G~~VP~P~~--~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~-~~~GiVH 225 (304)
T COG0478 157 EREFEALQRLYP-----EGVKVPKPIA--WNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKA-YRRGIVH 225 (304)
T ss_pred HHHHHHHHHhhh-----cCCCCCCccc--cccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHH-HHcCccc
Confidence 233334444432 4588999995 467899999999999887531 2345667777766665444 4999999
Q ss_pred CCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004115 465 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 525 (773)
Q Consensus 465 aDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~ 525 (773)
+|+.+=||+|++ +|.+++|||-.+-..+.+.-..+ +.+|.+.++..+..-..
T Consensus 226 GDlSefNIlV~~--dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 226 GDLSEFNILVTE--DGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred cCCchheEEEec--CCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 999999999996 89999999999998887665443 46788888888876543
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.98 E-value=3.8e-10 Score=115.43 Aligned_cols=227 Identities=17% Similarity=0.197 Sum_probs=137.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|.|.++.|+.|.. +.+.++||+.+|--.+.|.++++||..+..- |
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg-----~------------------------- 93 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGG-----P------------------------- 93 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCC-----C-------------------------
Confidence 5699999999999996 7899999999999999999999988765521 0
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCc
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 463 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~Gff 463 (773)
|+..+....++ | .|....|+.||++......+-.. -...|..--... +-..+..+|+.|++
T Consensus 94 ------NIi~L~DiV~D-p----------~SktpaLiFE~v~n~Dfk~ly~t-l~d~dIryY~~e-lLkALdyCHS~GIm 154 (338)
T KOG0668|consen 94 ------NIIKLLDIVKD-P----------ESKTPSLIFEYVNNTDFKQLYPT-LTDYDIRYYIYE-LLKALDYCHSMGIM 154 (338)
T ss_pred ------CeeehhhhhcC-c----------cccCchhHhhhhccccHHHHhhh-hchhhHHHHHHH-HHHHHhHHHhcCcc
Confidence 11111111111 1 23444678889888665543110 001121111111 22347788999999
Q ss_pred cCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 464 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 464 HaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
|||.||-|++|++ ...++.|||||++..+.+..-.+..- .+-.-+-|+.++ +.....=+.|++++.-.+..++
T Consensus 155 HRDVKPhNvmIdh-~~rkLrlIDWGLAEFYHp~~eYnVRV--ASRyfKGPELLV----dy~~YDYSLD~WS~GcmlA~mi 227 (338)
T KOG0668|consen 155 HRDVKPHNVMIDH-ELRKLRLIDWGLAEFYHPGKEYNVRV--ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMI 227 (338)
T ss_pred cccCCcceeeech-hhceeeeeecchHhhcCCCceeeeee--ehhhcCCchhee----echhccccHHHHHHHHHHHHHH
Confidence 9999999999986 46789999999999888765443321 011123333332 3333333568888876554443
Q ss_pred HHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHH--HHHHHHHhhCCccCCceehhhh
Q 004115 544 NSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIG--EDLLAIAADQPFRFPATFTFVV 609 (773)
Q Consensus 544 ~~~~~~l~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~--~~l~~l~~~~~i~lP~~~~ll~ 609 (773)
-. + +. |-..-+...+ -.+++.++ .++..-..++++.+||.|--++
T Consensus 228 Fr---------k-------ep-FFhG~dN~DQ----LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~ 274 (338)
T KOG0668|consen 228 FR---------K-------EP-FFHGHDNYDQ----LVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL 274 (338)
T ss_pred hc---------c-------Cc-ccCCCCCHHH----HHHHHHHhChHHHHHHHHHHccCCChhHhhHh
Confidence 11 0 01 1111222111 13455554 4788888889998888876644
No 399
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.97 E-value=1.4e-09 Score=124.59 Aligned_cols=178 Identities=19% Similarity=0.209 Sum_probs=113.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-+|.||++.|+++.. +++..+||++--...+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~---------------------------------------------- 361 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRADD---------------------------------------------- 361 (612)
T ss_pred cccCCCCccceeeeeccccccchhheeccccccc----------------------------------------------
Confidence 4499999999999999 6899999987211000
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC-CHHHHHHHHHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV-DRKRLGRYAVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~-d~~~la~~li~~~l~qI~~~G 461 (773)
-..|.....+ ..++++ +..-.++ +.....++|||.+.|.-+-+-........ ....++.. +-.++..+|++|
T Consensus 362 ~~~e~~~~~~----~~~h~niv~~~~v~-~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~-lv~Av~~LH~~g 435 (612)
T KOG0603|consen 362 NQDEIPISLL----VRDHPNIVKSHDVY-EDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAE-LVSAVDYLHEQG 435 (612)
T ss_pred cccccchhhh----hcCCCcceeeccee-cCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHhcC
Confidence 0001111111 112222 2223333 33456799999999987766322111111 11112222 334578899999
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 541 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~ 541 (773)
++|||+||+|||+.+ ..|.|.++|||....+.++.. .- .-+-.++++++...--.++..|.+++...++.
T Consensus 436 vvhRDLkp~NIL~~~-~~g~lrltyFG~a~~~~~~~~-------tp--~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ 505 (612)
T KOG0603|consen 436 VVHRDLKPGNILLDG-SAGHLRLTYFGFWSELERSCD-------TP--ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYE 505 (612)
T ss_pred eeecCCChhheeecC-CCCcEEEEEechhhhCchhhc-------cc--chhhcccChhhhccCCCCcchhhHHHHHHHHH
Confidence 999999999999952 478999999999999877610 10 11345666777765556778899999999888
Q ss_pred HHHH
Q 004115 542 FLNS 545 (773)
Q Consensus 542 ~l~~ 545 (773)
||..
T Consensus 506 ML~G 509 (612)
T KOG0603|consen 506 MLTG 509 (612)
T ss_pred HHhC
Confidence 8764
No 400
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.96 E-value=3.7e-09 Score=131.08 Aligned_cols=171 Identities=13% Similarity=0.160 Sum_probs=106.4
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
...||.|++|.||+|+. +|..||||..+.... . .
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~---------------------------~---------------- 730 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-I---------------------------P---------------- 730 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-c---------------------------c----------------
Confidence 36799999999999997 689999997632100 0 0
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHH-
Q 004115 383 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQIL- 458 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~qI~- 458 (773)
..|.+.+.++ ++++| .+-.++ ......++||||++|++|.++.. . .+....... .+...+..+|
T Consensus 731 --~~~~~~l~~l-----~HpnIv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~--~--l~~~~~~~i~~~ia~~L~yLH~ 798 (968)
T PLN00113 731 --SSEIADMGKL-----QHPNIVKLIGLC-RSEKGAYLIHEYIEGKNLSEVLR--N--LSWERRRKIAIGIAKALRFLHC 798 (968)
T ss_pred --HHHHHHHhhC-----CCCCcceEEEEE-EcCCCCEEEEeCCCCCcHHHHHh--c--CCHHHHHHHHHHHHHHHHHhcc
Confidence 0111222222 23332 222222 23456799999999999998753 1 222222222 2334467788
Q ss_pred --hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHH
Q 004115 459 --SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 536 (773)
Q Consensus 459 --~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~ 536 (773)
..+++|+|+||.||+++. ++..++ +||..+....... ..+.+.+++++....+......|++++.
T Consensus 799 ~~~~~iiH~dlkp~Nil~~~--~~~~~~-~~~~~~~~~~~~~----------~~~t~~y~aPE~~~~~~~~~~sDv~S~G 865 (968)
T PLN00113 799 RCSPAVVVGNLSPEKIIIDG--KDEPHL-RLSLPGLLCTDTK----------CFISSAYVAPETRETKDITEKSDIYGFG 865 (968)
T ss_pred CCCCCeecCCCCHHhEEECC--CCceEE-EeccccccccCCC----------ccccccccCcccccCCCCCcccchhhHH
Confidence 669999999999999975 444433 3665544322211 0234567777777666677789999999
Q ss_pred HHHHHHHH
Q 004115 537 RTAQFFLN 544 (773)
Q Consensus 537 ~~i~~~l~ 544 (773)
..+.+++.
T Consensus 866 vvl~el~t 873 (968)
T PLN00113 866 LILIELLT 873 (968)
T ss_pred HHHHHHHh
Confidence 88877764
No 401
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.96 E-value=3.8e-09 Score=112.47 Aligned_cols=188 Identities=18% Similarity=0.195 Sum_probs=122.1
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.+-+|+|.+|.|-.++- +|.++||||...- |.. -+..+.+|+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-----------------------~gH-------------sR~RvfREV 126 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-----------------------PGH-------------SRSRVFREV 126 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcC-----------------------Cch-------------HHHHHHHHH
Confidence 36799999999999987 8999999987211 110 123334444
Q ss_pred HHHHHH---HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH--HHHHHHHHHHHHH
Q 004115 383 DYTQEA---ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR--LGRYAVESYLEQI 457 (773)
Q Consensus 383 Df~~EA---~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~--la~~li~~~l~qI 457 (773)
...... .|+..+-+.|.+ .++.|||||-+.|++|-.....+ .-++..+ ....-+...|..+
T Consensus 127 e~f~~Cqgh~nilqLiefFEd-------------d~~FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFl 192 (463)
T KOG0607|consen 127 ETFYQCQGHKNILQLIEFFED-------------DTRFYLVFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFL 192 (463)
T ss_pred HHHHHhcCCccHHHHHHHhcc-------------cceEEEEEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHH
Confidence 444333 366666666654 56789999999999987643211 1222222 2223355678999
Q ss_pred HhCCCccCCCCCCceEEeccCC-CcEEEEeecceecc------ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CC
Q 004115 458 LSHGFFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSI------SPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GV 525 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~-g~I~LlDFGlv~~L------s~~~r~~l~~l~~al~~~D~~~i~~~l~~l-----G~ 525 (773)
|..|+-|||+||.|||..+++. ..++++||-+...+ ++-..-. + ..--+..+.|++++.+. -+
T Consensus 193 H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~---L--~tPvGSAEfMAPEVVd~fv~qA~~ 267 (463)
T KOG0607|consen 193 HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPE---L--LTPVGSAEFMAPEVVDVFVDQATF 267 (463)
T ss_pred hhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCcc---c--cCcccchhhcchhHHhhhcccccc
Confidence 9999999999999999875221 35899999776543 1111101 1 11235667777766653 34
Q ss_pred CCCCCChHHHHHHHHHHHHHHH
Q 004115 526 LVPTGDTTAVRRTAQFFLNSFE 547 (773)
Q Consensus 526 ~~~~~D~~~l~~~i~~~l~~~~ 547 (773)
.....|.++|...++.+|..|.
T Consensus 268 YDKrCDlwSLGvIlYImLsGYp 289 (463)
T KOG0607|consen 268 YDKRCDLWSLGVILYIMLSGYP 289 (463)
T ss_pred ccccccHHHHHHHHHHHHhCCC
Confidence 4556799999999999998874
No 402
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.96 E-value=5.8e-10 Score=134.51 Aligned_cols=129 Identities=19% Similarity=0.189 Sum_probs=82.7
Q ss_pred eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 417 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 417 ~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~---~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
.|+-||||+-..+.++..-....-++.. +-.+++ ..+.+||..|++|||+||.||++++ ++.|+|.|||++..+
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~-~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDE-AWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHH-HHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhh
Confidence 5899999999888887543332212222 222222 2367899999999999999999985 889999999999874
Q ss_pred ChhhHHHHHH-HHHHHh-----------hcCHHHHHHHHHHc-C--CCCCCCChHHHHHHHHHHHHHHHH
Q 004115 494 SPNIREGLLE-AFYGIY-----------EKDADKVLQAMVQM-G--VLVPTGDTTAVRRTAQFFLNSFEE 548 (773)
Q Consensus 494 s~~~r~~l~~-l~~al~-----------~~D~~~i~~~l~~l-G--~~~~~~D~~~l~~~i~~~l~~~~~ 548 (773)
-......... .+.... -+..-++++++..- . ......|+++++-.+-+++-+|..
T Consensus 748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~T 817 (1351)
T KOG1035|consen 748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGT 817 (1351)
T ss_pred hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCc
Confidence 3211111000 000111 12345677777653 3 356678999999877777665543
No 403
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.95 E-value=1.7e-09 Score=131.05 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=88.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+-+|.|++|+||+|+. +|+.||+||++|-..-. ..|.. ++...|.
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~-------------------------q~~~RLk----- 749 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICL-------------------------QVMERLK----- 749 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehH-------------------------HHHHhhc-----
Confidence 4699999999999999 89999999998865322 11111 1111111
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 462 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~Gf 462 (773)
......+..+.. -. -+.+..+||+||.+-++|-|+.. .....+..-+.-.. +...++++|.+||
T Consensus 750 ~~~~~~~~~~~~----------a~---~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~I 815 (974)
T KOG1166|consen 750 PQMLPSIMHISS----------AH---VFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGI 815 (974)
T ss_pred hhhhcchHHHHH----------HH---ccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcce
Confidence 000001111111 11 13567899999999999998764 22223332222222 2344889999999
Q ss_pred ccCCCCCCceEEecc-----CCCcEEEEeecceec
Q 004115 463 FHADPHPGNIAVDDV-----NGGRLIFYDFGMMGS 492 (773)
Q Consensus 463 fHaDpHPGNILV~~~-----~~g~I~LlDFGlv~~ 492 (773)
+|||+||.|++++.. +...|+|||||.+-.
T Consensus 816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred ecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999999999732 123699999997644
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.94 E-value=1.9e-09 Score=118.38 Aligned_cols=162 Identities=18% Similarity=0.288 Sum_probs=105.4
Q ss_pred CCCCHHHHHHHHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-c----CeeEEEEEecC
Q 004115 259 DILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-K----GEEVVVKVQRP 333 (773)
Q Consensus 259 DllP~~~~~eLs~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~----G~~VAVKVqrP 333 (773)
|+.+....+++.+|+...|-. ...|. ...+||.|+|+.||+|++ . ++.||+|-.++
T Consensus 14 d~~~~~k~ee~~~l~q~~p~~-----------------~~~~~--~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ 74 (418)
T KOG1167|consen 14 DISAEDKGEEIEQLRQDIPFI-----------------SNAYK--VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR 74 (418)
T ss_pred hcchhhhhhHHHHHHhhhhhh-----------------hhhhh--hhccccccchhhhhhhhHhhhccccceEeeeeccc
Confidence 455555557777776655421 12221 346899999999999998 3 57899997643
Q ss_pred CccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCCccccceee
Q 004115 334 GLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA---NAELFASNFKDMDYVKVPTIF 410 (773)
Q Consensus 334 ~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~---Nl~rf~~~f~~~~~V~vP~v~ 410 (773)
--. + ..+..|+.+..++. |+......++.
T Consensus 75 ts~------------------------------p--------~ri~~El~~L~~~gG~~ni~~~~~~~rn---------- 106 (418)
T KOG1167|consen 75 TSS------------------------------P--------SRILNELEMLYRLGGSDNIIKLNGCFRN---------- 106 (418)
T ss_pred ccC------------------------------c--------hHHHHHHHHHHHhccchhhhcchhhhcc----------
Confidence 211 1 12344555555543 44333333332
Q ss_pred eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeec
Q 004115 411 WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 488 (773)
Q Consensus 411 ~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFG 488 (773)
....++||||.+-....++.. +++...+...+-. ..+.++|..|++|||+||+|++.+. ..++-.|+|||
T Consensus 107 ---nd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvDFg 178 (418)
T KOG1167|consen 107 ---NDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVDFG 178 (418)
T ss_pred ---CCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEech
Confidence 456789999999888777632 2333344333333 2377889999999999999999986 57899999999
Q ss_pred ceeccCh
Q 004115 489 MMGSISP 495 (773)
Q Consensus 489 lv~~Ls~ 495 (773)
++...+.
T Consensus 179 LA~~~d~ 185 (418)
T KOG1167|consen 179 LAQRYDG 185 (418)
T ss_pred hHHHHHh
Confidence 9986433
No 405
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.93 E-value=2.8e-09 Score=111.44 Aligned_cols=197 Identities=17% Similarity=0.232 Sum_probs=129.9
Q ss_pred hhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004115 298 DVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 374 (773)
Q Consensus 298 eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 374 (773)
+.|..+++ +-+|.|..+.|-|+.. +|.+.|+|+.--..... .. +-..++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~---------------------------~~-e~~~~~ 65 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE---------------------------SG-ETPYEM 65 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc---------------------------CC-ccHHHH
Confidence 45666665 6789999999999988 68899999873221110 01 114556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH
Q 004115 375 ASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY 453 (773)
Q Consensus 375 ~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~ 453 (773)
.+...+|++..+. ..++|+| .+-.+| +-.+-.+||.|.++-+.|-|+.... -.++.++ .+.+++..
T Consensus 66 ~EaT~~Ev~ILRq----------v~GHP~II~l~D~y-es~sF~FlVFdl~prGELFDyLts~-VtlSEK~-tR~iMrql 132 (411)
T KOG0599|consen 66 REATRQEISILRQ----------VMGHPYIIDLQDVY-ESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKE-TRRIMRQL 132 (411)
T ss_pred HHHHHHHHHHHHH----------hcCCCcEEEeeeec-cCcchhhhhhhhcccchHHHHhhhh-eeecHHH-HHHHHHHH
Confidence 6666666654332 2344543 333444 3345568999999999999976422 1122222 23333332
Q ss_pred ---HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC----
Q 004115 454 ---LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL---- 526 (773)
Q Consensus 454 ---l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~---- 526 (773)
...+|...++|||+||.|||+++ +.+|++.|||.+.++.+..+ +.+ +.+.+.+++++.++-...
T Consensus 133 fegVeylHa~~IVHRDLKpENILldd--n~~i~isDFGFa~~l~~Gek--Lre-----lCGTPgYLAPEtikC~m~e~~p 203 (411)
T KOG0599|consen 133 FEGVEYLHARNIVHRDLKPENILLDD--NMNIKISDFGFACQLEPGEK--LRE-----LCGTPGYLAPETIKCSMYENHP 203 (411)
T ss_pred HHHHHHHHHhhhhhcccChhheeecc--ccceEEeccceeeccCCchh--HHH-----hcCCCcccChhheeeecccCCC
Confidence 46688999999999999999986 78999999999999988765 222 357899998888764332
Q ss_pred --CCCCChHHHHHHHHHHHH
Q 004115 527 --VPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 527 --~~~~D~~~l~~~i~~~l~ 544 (773)
....|.++....++-++.
T Consensus 204 GYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 204 GYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred CccchhhHHHHHHHHHHHHc
Confidence 234688888877666553
No 406
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=2.2e-08 Score=100.39 Aligned_cols=148 Identities=18% Similarity=0.253 Sum_probs=100.8
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+..++-.|.-|.|+++...|+..+||-.-|.- |..+.+-..+.+. .
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~-----------------------------YRHP~LD~kLtr~-----R 56 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKR-----------------------------YRHPALDQKLTRK-----R 56 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeeccccc-----------------------------ccchHHHHHHHHH-----H
Confidence 45788999999999999999999999663322 2222222222111 3
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCC-Chhhhhh-hhhcCCCHHHHHH--HHHHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGI-KINRIQS-LDELGVDRKRLGR--YAVESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~-~L~d~~~-l~~~~~d~~~la~--~li~~~l~qI~~ 459 (773)
..+||+-+.+++.. ++.+|.+|........|.|||++|. ++.++.. ......+...++. .-+...+.-+|.
T Consensus 57 t~~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ 131 (229)
T KOG3087|consen 57 TKQEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD 131 (229)
T ss_pred HHHHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh
Confidence 46788888887653 6899999987778889999999994 4445332 1222222222111 123344667899
Q ss_pred CCCccCCCCCCceEEeccCCCc--EEEEeeccee
Q 004115 460 HGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMG 491 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~--I~LlDFGlv~ 491 (773)
.+++|+|+...||++.+ ++++ +.++|||+..
T Consensus 132 ndiiHGDLTTSNill~~-~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 132 NDIIHGDLTTSNILLRS-DGNQITPILIDFGLSS 164 (229)
T ss_pred CCeecccccccceEEec-CCCcCceEEEeecchh
Confidence 99999999999999986 3444 4999999764
No 407
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.90 E-value=2.7e-09 Score=111.73 Aligned_cols=78 Identities=23% Similarity=0.402 Sum_probs=50.7
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHH----hCCCccCCCCCCceEEeccCCCcEEEEeecce
Q 004115 415 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQIL----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 490 (773)
Q Consensus 415 t~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~----~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv 490 (773)
+...++||.+.- -.+.+... -.+.-+++++..+.-+.++.++ .||++|||+||.|||+++ .|.|+|+|||+.
T Consensus 164 ~dV~IcMelMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe--~GniKlCDFGIs 239 (391)
T KOG0983|consen 164 TDVFICMELMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGNIKLCDFGIS 239 (391)
T ss_pred chHHHHHHHHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc--CCCEEeeccccc
Confidence 344566666521 12222211 1222345555554444444433 699999999999999986 899999999999
Q ss_pred eccChh
Q 004115 491 GSISPN 496 (773)
Q Consensus 491 ~~Ls~~ 496 (773)
|++.+.
T Consensus 240 GrlvdS 245 (391)
T KOG0983|consen 240 GRLVDS 245 (391)
T ss_pred ceeecc
Confidence 998764
No 408
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.88 E-value=4.1e-08 Score=105.00 Aligned_cols=104 Identities=14% Similarity=0.019 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccccee--eecc-----CCCeEEEEeecCCC-Chhhhhhhh-hcCCCHH---HHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTI--FWEY-----TTPQILTMEYVPGI-KINRIQSLD-ELGVDRK---RLGRYAV 450 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v--~~e~-----st~~vLVMEyieG~-~L~d~~~l~-~~~~d~~---~la~~li 450 (773)
.+.+|.+++.++.+. +|.+|.+ |.+. ..+.+||||+++|. ++.++...- ....+.. .+.. .+
T Consensus 74 ~a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~-~l 147 (268)
T PRK15123 74 GADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIK-RV 147 (268)
T ss_pred HHHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHH-HH
Confidence 367888999998763 5777777 4322 23479999999996 788864311 1111211 2222 24
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEec-----cCCCcEEEEeecceec
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDD-----VNGGRLIFYDFGMMGS 492 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~-----~~~g~I~LlDFGlv~~ 492 (773)
..++.++|..|++|+|++|+|||++. ..+.++.+|||+.+..
T Consensus 148 a~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 148 ATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 55688899999999999999999974 1246899999998853
No 409
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.87 E-value=1.5e-08 Score=102.60 Aligned_cols=147 Identities=19% Similarity=0.244 Sum_probs=90.7
Q ss_pred CcccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
+-+|++.|..++||+.+. +|+.++||+.+++-... ...
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~-----------------------------------------~~~ 40 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP-----------------------------------------SAH 40 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCc-----------------------------------------ccc
Confidence 347899999999999998 46999999864432100 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCC-----CeEEEEeecCCCChhhhhh----------------------h
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTT-----PQILTMEYVPGIKINRIQS----------------------L 435 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st-----~~vLVMEyieG~~L~d~~~----------------------l 435 (773)
++..|++.+..+++. ++.+|+++.-... ..+++|||++|.++.+... +
T Consensus 41 ~~~~E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l 115 (223)
T cd05154 41 DVAREYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAAL 115 (223)
T ss_pred cHHHHHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456777777777552 4678887764333 4589999999998866321 0
Q ss_pred hhcC-----C-C--------HHHHHHH-------------HHHHHHHHH-------HhCCCccCCCCCCceEEeccCCCc
Q 004115 436 DELG-----V-D--------RKRLGRY-------------AVESYLEQI-------LSHGFFHADPHPGNIAVDDVNGGR 481 (773)
Q Consensus 436 ~~~~-----~-d--------~~~la~~-------------li~~~l~qI-------~~~GffHaDpHPGNILV~~~~~g~ 481 (773)
.... . + ...+... .+...++.+ ...+++|+|+||+||++++..++.
T Consensus 116 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~ 195 (223)
T cd05154 116 HSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRV 195 (223)
T ss_pred hCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcE
Confidence 0000 0 0 0000000 001111111 146789999999999997411356
Q ss_pred EEEEeecceeccChh
Q 004115 482 LIFYDFGMMGSISPN 496 (773)
Q Consensus 482 I~LlDFGlv~~Ls~~ 496 (773)
+.++||+.++.-++.
T Consensus 196 ~~iID~e~~~~g~~~ 210 (223)
T cd05154 196 VAVLDWELATLGDPL 210 (223)
T ss_pred EEEEeccccccCChH
Confidence 889999999876553
No 410
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=9.3e-09 Score=113.62 Aligned_cols=168 Identities=20% Similarity=0.205 Sum_probs=105.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+-||.|-||.|+||.++|+.|||||-.---+. +.++|- .+.+=.-++
T Consensus 217 e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~-------------------------------SWfrEt--EIYqTvmLR 263 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRGEDVAVKIFSSRDER-------------------------------SWFRET--EIYQTVMLR 263 (513)
T ss_pred EEecCccccceeeccccCCceEEEEecccchh-------------------------------hhhhHH--HHHHHHHhc
Confidence 67999999999999999999999987221111 111110 000001111
Q ss_pred HHHHHHHHHHHh-cCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH----
Q 004115 386 QEAANAELFASN-FKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL---- 458 (773)
Q Consensus 386 ~EA~Nl~rf~~~-f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~---- 458 (773)
. .|+-.|-.. .++. ...|+.+||++|-+-++|.|+.. ...++.......... .-|.++|
T Consensus 264 H--ENILgFIaaD~~~~----------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~ 329 (513)
T KOG2052|consen 264 H--ENILGFIAADNKDN----------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIV 329 (513)
T ss_pred c--chhhhhhhccccCC----------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHh
Confidence 1 244444321 1111 23578899999999999999853 345566655554433 3355555
Q ss_pred ----hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004115 459 ----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG 524 (773)
Q Consensus 459 ----~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG 524 (773)
.-.+-|||+|..||||.. +|..++.|+|++-+.+.... ..+.=..---+.-.+|++++++-.
T Consensus 330 GTqgKPaIAHRDlKSKNILVKk--n~~C~IADLGLAv~h~~~t~--~idi~~N~rVGTKRYMAPEvLdet 395 (513)
T KOG2052|consen 330 GTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSDTD--TIDIPPNPRVGTKRYMAPEVLDET 395 (513)
T ss_pred cCCCCchhhccccccccEEEcc--CCcEEEeeceeeEEecccCC--cccCCCCCccceeeccChHHhhhh
Confidence 345999999999999985 89999999999988766531 111111111345677888887643
No 411
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.86 E-value=1.7e-09 Score=112.88 Aligned_cols=140 Identities=21% Similarity=0.321 Sum_probs=88.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|+||.||+-.+ .|+..|||-.|-...+. -..++..|+|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k-----------------------------------eq~rll~e~d 114 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK-----------------------------------EQKRLLMEHD 114 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH-----------------------------------HHHHHHHHHH
Confidence 5699999999999999 69999999875443211 1233444555
Q ss_pred HHHHHH---HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhh----hhhcCCCHHHHHHHHH--HHHH
Q 004115 384 YTQEAA---NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS----LDELGVDRKRLGRYAV--ESYL 454 (773)
Q Consensus 384 f~~EA~---Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~----l~~~~~d~~~la~~li--~~~l 454 (773)
-..-+. |+.+|....-. .+..|++||.++ .+++.+-. ..+..+...-++...+ -..|
T Consensus 115 ~~mks~~cp~IVkfyGa~F~-------------EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL 180 (361)
T KOG1006|consen 115 TVMKSSNCPNIVKFYGALFS-------------EGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDAL 180 (361)
T ss_pred HHHhhcCCcHHHHHhhhhhc-------------CCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHH
Confidence 544433 66666653211 356799999996 34444211 1111122221221111 1123
Q ss_pred HHHH-hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 455 EQIL-SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 455 ~qI~-~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
..+- ...++|||+||.|||++. .|.++|+|||++|++-..
T Consensus 181 ~yLK~~lkiIHRDvKPSNILldr--~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 181 DYLKEELKIIHRDVKPSNILLDR--HGDVKLCDFGICGQLVDS 221 (361)
T ss_pred HHHHHHhhhhhccCChhheEEec--CCCEeeecccchHhHHHH
Confidence 3333 568999999999999986 899999999999988543
No 412
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.84 E-value=6.2e-09 Score=121.98 Aligned_cols=186 Identities=17% Similarity=0.118 Sum_probs=123.4
Q ss_pred CcccccccceeE-EEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQ-VHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 304 d~~PIgsaSiGQ-VhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
.++-+|.||-|. ||+|...|++||||- ++.|+.....+|+
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~R~VAVKr---------------------------------------ll~e~~~~A~rEi 553 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEGREVAVKR---------------------------------------LLEEFFDFAQREI 553 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCCceehHHH---------------------------------------HhhHhHHHHHHHH
Confidence 346677888876 699999999999993 2345555566777
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-----hcC-CCHHHHHHHHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-----ELG-VDRKRLGRYAVESYLEQ 456 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-----~~~-~d~~~la~~li~~~l~q 456 (773)
+..+|.. ++++|.--........-.|++.|.|. .+|.|+.... ..+ +++..+.... ...+.+
T Consensus 554 ~lL~eSD----------~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~-~~GlaH 621 (903)
T KOG1027|consen 554 QLLQESD----------EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQI-ASGLAH 621 (903)
T ss_pred HHHHhcc----------CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHH-HHHHHH
Confidence 7766642 22332221111112223599999996 4788875442 111 2333333332 235788
Q ss_pred HHhCCCccCCCCCCceEEecc---CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 457 ILSHGFFHADPHPGNIAVDDV---NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~---~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+|..+++|||+||.||||... ...+++|.|||++++++... ..+.. .+-..+....++++++........+|+.
T Consensus 622 LHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-sS~~r--~s~~sGt~GW~APE~L~~~~~~~avDiF 698 (903)
T KOG1027|consen 622 LHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-SSFSR--LSGGSGTSGWQAPEQLREDRKTQAVDIF 698 (903)
T ss_pred HHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc-chhhc--ccCCCCcccccCHHHHhccccCcccchh
Confidence 999999999999999999741 12478999999999997643 33443 3445678888999999887777778888
Q ss_pred HHHHHHHHHH
Q 004115 534 AVRRTAQFFL 543 (773)
Q Consensus 534 ~l~~~i~~~l 543 (773)
++...+++.+
T Consensus 699 slGCvfyYvl 708 (903)
T KOG1027|consen 699 SLGCVFYYVL 708 (903)
T ss_pred hcCceEEEEe
Confidence 7776655443
No 413
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.84 E-value=1.1e-08 Score=103.69 Aligned_cols=173 Identities=18% Similarity=0.220 Sum_probs=103.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-||.|.+|||-+-++ +|+-.|||-.+-.+.. .....+..|+|
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-----------------------------------q~q~r~L~dld 96 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-----------------------------------QEQKRLLMDLD 96 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh-----------------------------------HHHHHHHHhhh
Confidence 3589999999988888 8999999966433221 12223334444
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhh--hhhhcCCCHHHHHHHHHHHH---
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQ--SLDELGVDRKRLGRYAVESY--- 453 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~--~l~~~~~d~~~la~~li~~~--- 453 (773)
..+ ..+.+|..+.- -+.+.+++||.++- +++.+- .++..+.-++.+...++-+.
T Consensus 97 i~~---------------r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~a 160 (282)
T KOG0984|consen 97 IIM---------------RTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHA 160 (282)
T ss_pred hhc---------------cCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHH
Confidence 321 12333333321 25678999999963 555432 23334433444444433333
Q ss_pred HHHHH-hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC----CC
Q 004115 454 LEQIL-SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL----VP 528 (773)
Q Consensus 454 l~qI~-~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~----~~ 528 (773)
+..+| .-.++|||+||+|||++. +|+++++|||++|.+.+..-. .+ -.+=-.+++++.++-+.- .-
T Consensus 161 l~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGIsG~L~dSiAk----t~---daGCkpYmaPEri~~e~n~~gY~v 231 (282)
T KOG0984|consen 161 LEFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGISGYLVDSIAK----TM---DAGCKPYMAPERINPELNQKGYSV 231 (282)
T ss_pred HHHHHHHhhhhhccCCcceEEEcc--CCcEEEcccccceeehhhhHH----HH---hcCCCccCChhhcCcccCccccee
Confidence 44555 457999999999999986 999999999999999765322 21 123334455554443321 12
Q ss_pred CCChHHHHHH
Q 004115 529 TGDTTAVRRT 538 (773)
Q Consensus 529 ~~D~~~l~~~ 538 (773)
..|.+++.-.
T Consensus 232 ksDvWSLGIt 241 (282)
T KOG0984|consen 232 KSDVWSLGIT 241 (282)
T ss_pred ehhhhhhhhh
Confidence 3577776643
No 414
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.83 E-value=1.3e-08 Score=112.54 Aligned_cols=186 Identities=20% Similarity=0.186 Sum_probs=133.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..||.|+||.||-++- +|+-+|.|-. |-+-++ +. ..|--
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL----------~KKRiK-------kr----------------------~ge~m 231 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKL----------DKKRIK-------KR----------------------KGETM 231 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHH----------HHHHHH-------Hh----------------------hhhHH
Confidence 5799999999998887 6887777743 111111 00 11223
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYA--VESYLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d-~~~l~~~~~d~~~la~~l--i~~~l~qI~~ 459 (773)
-.+|..++++...-| .|--.|. +-....+|||+.++|+.|.= +-.....+++..+..-.. +..-|+.+|+
T Consensus 232 aLnEk~iL~kV~s~F------iVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~ 305 (591)
T KOG0986|consen 232 ALNEKQILEKVSSPF------IVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR 305 (591)
T ss_pred hhHHHHHHHHhccCc------EEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh
Confidence 356777777664422 2222232 33456799999999999863 334455567766554443 4445889999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
.+++.||+||.|||+++ .|.+.+.|.|++..+++...-. --.+...+|+++++.-+...-..|-.++.-.+
T Consensus 306 ~~iVYRDLKPeNILLDd--~GhvRISDLGLAvei~~g~~~~-------~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCll 376 (591)
T KOG0986|consen 306 RRIVYRDLKPENILLDD--HGHVRISDLGLAVEIPEGKPIR-------GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLL 376 (591)
T ss_pred cceeeccCChhheeecc--CCCeEeeccceEEecCCCCccc-------cccCcccccCHHHHcCCcccCCccHHHHHhHH
Confidence 99999999999999986 8999999999999998865421 12478899999999999988889999999999
Q ss_pred HHHHHH
Q 004115 540 QFFLNS 545 (773)
Q Consensus 540 ~~~l~~ 545 (773)
++++..
T Consensus 377 Yemi~G 382 (591)
T KOG0986|consen 377 YEMIAG 382 (591)
T ss_pred HHHHcc
Confidence 888754
No 415
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.79 E-value=1.6e-08 Score=113.36 Aligned_cols=178 Identities=25% Similarity=0.319 Sum_probs=101.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCc--cchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARL--KGEEVVVKVQRPGL--KDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 307 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i--~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
-.|.|-|+.|.+|.. .|..|||||+|-+- .+.=...+.||+.|.. ..|. +
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~----AD~E---------d------------- 492 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND----ADPE---------D------------- 492 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc----cCch---------h-------------
Confidence 479999999999999 69999999998652 1222234444443321 1110 0
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHH-----
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQI----- 457 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI----- 457 (773)
- .+..++...|.+ -...|||.|-+. ..|.++ +...|.+-. +--..+++|.+|+
T Consensus 493 ----k-~Hclrl~r~F~h-------------knHLClVFE~Ls-lNLRev--LKKyG~nvG-L~ikaVRsYaqQLflALk 550 (752)
T KOG0670|consen 493 ----K-FHCLRLFRHFKH-------------KNHLCLVFEPLS-LNLREV--LKKYGRNVG-LHIKAVRSYAQQLFLALK 550 (752)
T ss_pred ----h-hHHHHHHHHhhh-------------cceeEEEehhhh-chHHHH--HHHhCcccc-eeehHHHHHHHHHHHHHH
Confidence 0 122233333332 344567766542 233343 233322110 1112244454444
Q ss_pred --HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC-CCChHH
Q 004115 458 --LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP-TGDTTA 534 (773)
Q Consensus 458 --~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~-~~D~~~ 534 (773)
-.+||+|+|+||.||||+. ....++|||||.+...++..-..|+ +.-+-+.|+-| +|+.-. ..|+++
T Consensus 551 lLK~c~vlHaDIKPDNiLVNE-~k~iLKLCDfGSA~~~~eneitPYL---VSRFYRaPEIi------LG~~yd~~iD~WS 620 (752)
T KOG0670|consen 551 LLKKCGVLHADIKPDNILVNE-SKNILKLCDFGSASFASENEITPYL---VSRFYRAPEII------LGLPYDYPIDTWS 620 (752)
T ss_pred HHHhcCeeecccCccceEecc-CcceeeeccCccccccccccccHHH---HHHhccCccee------ecCcccCCcccee
Confidence 4799999999999999986 4567999999999999887655442 22222333322 444322 357777
Q ss_pred HHHHHHHH
Q 004115 535 VRRTAQFF 542 (773)
Q Consensus 535 l~~~i~~~ 542 (773)
+.-.++++
T Consensus 621 vgctLYEl 628 (752)
T KOG0670|consen 621 VGCTLYEL 628 (752)
T ss_pred eceeeEEe
Confidence 76655543
No 416
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.77 E-value=3.1e-08 Score=111.91 Aligned_cols=183 Identities=18% Similarity=0.210 Sum_probs=113.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+-||+|+-+.||++.- +.+-+|+|-.. +.. .|.. .++ -|
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~--------------------~~~---------~D~q-tl~----------gy 406 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV--------------------LLE---------ADNQ-TLD----------GY 406 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH--------------------Hhh---------cCHH-HHH----------HH
Confidence 6799999999999998 44556655220 000 0111 111 36
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHH---HHHHHHHHHHHHh
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLG---RYAVESYLEQILS 459 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la---~~li~~~l~qI~~ 459 (773)
.+|..-+.+|+.+ ..|-..|.- -.+..||||||=+ +.|+.+..-... .++.... ..-+-.+++.+|.
T Consensus 407 ~nEI~lL~KLkg~------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 407 RNEIALLNKLKGH------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred HHHHHHHHHhcCC------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHH
Confidence 7777777777653 334444431 1345699999843 467776543322 2221121 2223334567899
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH-HHcCC----------CCC
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM-VQMGV----------LVP 528 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l-~~lG~----------~~~ 528 (773)
+|++|.|+||.|+++- .|.++|||||++..+.+++..-+.+-- .+.+.+|.++. .++.. +.+
T Consensus 479 ~gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~~DTTsI~kdsQ----vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r 551 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV---KGRLKLIDFGIANAIQPDTTSIVKDSQ----VGTVNYMSPEALTDMSSSRENGKSKIKISR 551 (677)
T ss_pred hceeecCCCcccEEEE---eeeEEeeeechhcccCccccceeeccc----cCcccccCHHHHhhccccccCCCcceeecC
Confidence 9999999999999987 699999999999999876643332221 23444554432 33321 345
Q ss_pred CCChHHHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQFFL 543 (773)
Q Consensus 529 ~~D~~~l~~~i~~~l 543 (773)
..|++++.-.++.|+
T Consensus 552 ~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 552 KSDVWSLGCILYQMV 566 (677)
T ss_pred ccchhhhhhHHHHHH
Confidence 679999999988876
No 417
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=3.5e-08 Score=113.41 Aligned_cols=175 Identities=15% Similarity=0.148 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
-.+|.|.+|.||-|++ +...+|||-.. +. -.++..-+.+|+.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIp----ek--------------------------------dsr~~QPLhEEIa 624 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIP----EK--------------------------------DSREVQPLHEEIA 624 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecc----cc--------------------------------cchhhccHHHHHH
Confidence 5799999999999999 45678888541 11 0123344566766
Q ss_pred HHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC--CHHHHH--HHHHHHHHHHH
Q 004115 384 YTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLG--RYAVESYLEQI 457 (773)
Q Consensus 384 f~~EA--~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~--d~~~la--~~li~~~l~qI 457 (773)
+.... +|+.++-..+..+ +-.-+.||-++|++|+++....-... +...+. ...+-..++.+
T Consensus 625 LH~~LrHkNIVrYLGs~sen-------------Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYL 691 (1226)
T KOG4279|consen 625 LHSTLRHKNIVRYLGSVSEN-------------GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYL 691 (1226)
T ss_pred HHHHHhhHhHHHHhhccCCC-------------CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence 66554 4777766544332 22457899999999999876443332 222222 22334457888
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC--CCCCChHHH
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL--VPTGDTTAV 535 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~--~~~~D~~~l 535 (773)
|+..++|||+|..|+||+. =.|.+++.|||-++++..- ....+. +.+.-.+|++++++-|.- .+..|.++|
T Consensus 692 Hen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAgi--nP~TET----FTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 692 HENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGI--NPCTET----FTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred hhcceeeccccCCcEEEee-ccceEEecccccchhhccC--Cccccc----cccchhhhChHhhccCCcCCCchhhhhhc
Confidence 9999999999999999985 3689999999999887431 111222 356778889999987642 234576666
Q ss_pred H
Q 004115 536 R 536 (773)
Q Consensus 536 ~ 536 (773)
.
T Consensus 765 G 765 (1226)
T KOG4279|consen 765 G 765 (1226)
T ss_pred c
Confidence 5
No 418
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.73 E-value=7.1e-09 Score=115.76 Aligned_cols=145 Identities=19% Similarity=0.164 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHH
Q 004115 377 VLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY 453 (773)
Q Consensus 377 ~l~~ElDf~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~~~d~~~la~~li~~~ 453 (773)
.+..|-+...|.+ -+.++.+.|++... .|+.||-|=|+.|..+...+. ...+..++....+--.
T Consensus 466 Hv~sEr~Im~~~~s~fIvrLYrTfrd~ky-------------vYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EA 532 (732)
T KOG0614|consen 466 HVFSERNIMMECRSDFIVRLYRTFRDSKY-------------VYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEA 532 (732)
T ss_pred HHHhHHHHHHhcCchHHHHHHHHhccchh-------------hhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHH
Confidence 3444444455543 45666666666433 468999999999988653222 1123445555556666
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
+..+|++||+.||+||.|++++. +|-++|.|||.++.+....+.. .+.+.+++++++++--.-.....|.+
T Consensus 533 feYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFGFAKki~~g~KTw-------TFcGTpEYVAPEIILnKGHD~avDyW 603 (732)
T KOG0614|consen 533 FEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFGFAKKIGSGRKTW-------TFCGTPEYVAPEIILNKGHDRAVDYW 603 (732)
T ss_pred HHHHHhcCceeccCChhheeecc--CCceEEeehhhHHHhccCCcee-------eecCCcccccchhhhccCcchhhHHH
Confidence 89999999999999999999985 8999999999999997765532 14689999999987654456667888
Q ss_pred HHHHHHHHHH
Q 004115 534 AVRRTAQFFL 543 (773)
Q Consensus 534 ~l~~~i~~~l 543 (773)
++.-.+++++
T Consensus 604 aLGIli~ELL 613 (732)
T KOG0614|consen 604 ALGILIYELL 613 (732)
T ss_pred HHHHHHHHHH
Confidence 8887776665
No 419
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.73 E-value=1.5e-08 Score=115.31 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=61.1
Q ss_pred cCCCeEEEEeecCCCChhhhhhhhhcCCC--HHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecce
Q 004115 413 YTTPQILTMEYVPGIKINRIQSLDELGVD--RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 490 (773)
Q Consensus 413 ~st~~vLVMEyieG~~L~d~~~l~~~~~d--~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv 490 (773)
|.++.++..|||.|+-++.+.---..++. .-++....+.-.|..+|...++|||+|.||||++- +|.|.|.|||..
T Consensus 100 ~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVS 177 (1187)
T KOG0579|consen 100 FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVS 177 (1187)
T ss_pred ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccc
Confidence 45778999999999999875421112222 23333444455688899999999999999999996 899999999988
Q ss_pred eccCh
Q 004115 491 GSISP 495 (773)
Q Consensus 491 ~~Ls~ 495 (773)
.....
T Consensus 178 AKn~~ 182 (1187)
T KOG0579|consen 178 AKNKS 182 (1187)
T ss_pred ccchh
Confidence 77644
No 420
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.72 E-value=1.4e-08 Score=119.73 Aligned_cols=185 Identities=16% Similarity=0.183 Sum_probs=124.7
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
+-+|.|.||.||.|... -.-||||..+-....
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~----------------------------------------- 530 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN----------------------------------------- 530 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH-----------------------------------------
Confidence 46999999999999983 246999976322211
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-------C------CCHHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-------G------VDRKRL 445 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-------~------~d~~~l 445 (773)
....||++||.-+..|.+ ..-|++--|.. .....++|.||++-++|.++...... + ++..++
T Consensus 531 ~~~~dF~REaeLla~l~H----~nIVrLlGVC~-~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~ 605 (774)
T KOG1026|consen 531 QARQDFRREAELLAELQH----PNIVRLLGVCR-EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQF 605 (774)
T ss_pred HHHHHHHHHHHHHHhccC----CCeEEEEEEEc-cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHH
Confidence 134689999987766643 22233333332 24567999999999999997653221 1 334444
Q ss_pred HHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHH-HHHHHHhhcCHHHHHHHHHH
Q 004115 446 GRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL-EAFYGIYEKDADKVLQAMVQ 522 (773)
Q Consensus 446 a~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~-~l~~al~~~D~~~i~~~l~~ 522 (773)
.....+ +-+..+-++.|+|||+-.-|.||.+ +-.+++.||||++.+=..+-.... +.++ -...|.++-+.
T Consensus 606 L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge--~l~VKIsDfGLsRdiYssDYYk~~~~t~l-----PIRWMppEsIl 678 (774)
T KOG1026|consen 606 LHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE--NLVVKISDFGLSRDIYSSDYYKVRGNTLL-----PIRWMPPESIL 678 (774)
T ss_pred HHHHHHHHHHHHHHHhCcccccchhhhhceecc--ceEEEecccccchhhhhhhhhcccCCcee-----eeecCCHHHhh
Confidence 444433 4466677999999999999999985 678999999999875322221111 1111 13567778888
Q ss_pred cCCCCCCCChHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l 543 (773)
.|..+...|++++...+=+++
T Consensus 679 y~kFTteSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 679 YGKFTTESDVWSFGVVLWEIF 699 (774)
T ss_pred cCcccchhhhhhhhhhhhhhh
Confidence 888899999999998765544
No 421
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.67 E-value=5.1e-08 Score=114.01 Aligned_cols=185 Identities=13% Similarity=0.116 Sum_probs=127.1
Q ss_pred cccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 378 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 378 (773)
.+.||+|.||.||+|.+ +|+ +|||||..-.-...
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~---------------------------------------- 740 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK---------------------------------------- 740 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCch----------------------------------------
Confidence 35799999999999999 564 78999873211100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHH
Q 004115 379 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLE 455 (773)
Q Consensus 379 ~~ElDf~~EA~Nl~rf~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~ 455 (773)
.-..+..||-+|.++.+ +++ ++-.+ ...+..-||++|++++.|.|+.+..+..+-.+.+.....+ ..++
T Consensus 741 -~s~e~LdeAl~masldH-----pnl~RLLgv--c~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~ 812 (1177)
T KOG1025|consen 741 -ASIELLDEALRMASLDH-----PNLLRLLGV--CMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMK 812 (1177)
T ss_pred -hhHHHHHHHHHHhcCCC-----chHHHHhhh--cccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 01124455555544322 221 11111 1234478999999999999987766665655555554443 4477
Q ss_pred HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 535 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l 535 (773)
.+++++++|||+-.-|+||.. ...+++.|||+++-+.+...+..+. ...--+..|+=+.+.....+...|++++
T Consensus 813 YLe~qrlVHrdLaaRNVLVks--P~hvkitdfgla~ll~~d~~ey~~~----~gK~pikwmale~i~~~~~thqSDVWsf 886 (1177)
T KOG1025|consen 813 YLEEQRLVHRDLAARNVLVKS--PNHVKITDFGLAKLLAPDEKEYSAP----GGKVPIKWMALESIRIRKYTHQSDVWSF 886 (1177)
T ss_pred HHHhcchhhhhhhhhheeecC--CCeEEEEecchhhccCccccccccc----ccccCcHHHHHHHhhccCCCchhhhhhh
Confidence 889999999999999999985 6789999999999998876654332 1222345666666777888889999999
Q ss_pred HHHHHHHH
Q 004115 536 RRTAQFFL 543 (773)
Q Consensus 536 ~~~i~~~l 543 (773)
...+=+++
T Consensus 887 GVtiWElm 894 (1177)
T KOG1025|consen 887 GVTIWELM 894 (1177)
T ss_pred hhhHHHHH
Confidence 98776554
No 422
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.66 E-value=1.1e-08 Score=108.48 Aligned_cols=186 Identities=14% Similarity=0.101 Sum_probs=120.5
Q ss_pred CcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 304 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 304 d~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+.+.||.|--|.|-.+.. +|+..|+||++-.-+. ++|
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KA-----------------------------------------RrE 104 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKA-----------------------------------------RRE 104 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhcCHHH-----------------------------------------HhH
Confidence 447899999999999988 6999999987422111 223
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-ccccceeeecc-C--CCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHH--HHHHH
Q 004115 382 IDYTQEAANAELFASNFKDMD-YVKVPTIFWEY-T--TPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYA--VESYL 454 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~-~V~vP~v~~e~-s--t~~vLVMEyieG~~L~d~~~l~-~~~~d~~~la~~l--i~~~l 454 (773)
+++.--+ ..++ -|.+-.||... . .-..+|||.++|+.|-...+.+ ...+..++.++.. +...+
T Consensus 105 VeLHw~~----------s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av 174 (400)
T KOG0604|consen 105 VELHWMA----------SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAV 174 (400)
T ss_pred hhhhhhh----------cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHH
Confidence 2221111 1112 23344444321 1 2247899999999987643322 2224444444433 44568
Q ss_pred HHHHhCCCccCCCCCCceEEecc-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~-~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
..+|..++-|||+||.|+|.... .+-.++|.|||+++.-.... .+ ---.-.+.+++++.+.-.......|++
T Consensus 175 ~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~--~L-----~TPc~TPyYvaPevlg~eKydkscdmw 247 (400)
T KOG0604|consen 175 RYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG--DL-----MTPCFTPYYVAPEVLGPEKYDKSCDMW 247 (400)
T ss_pred HHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCc--cc-----cCCcccccccCHHHhCchhcCCCCCcc
Confidence 88999999999999999999742 23479999999999765321 11 011235777888777655566678999
Q ss_pred HHHHHHHHHHHHHH
Q 004115 534 AVRRTAQFFLNSFE 547 (773)
Q Consensus 534 ~l~~~i~~~l~~~~ 547 (773)
++...++.++-.|.
T Consensus 248 SlgVimYIlLCGyP 261 (400)
T KOG0604|consen 248 SLGVIMYILLCGYP 261 (400)
T ss_pred chhHHHHHhhcCCC
Confidence 99998888887663
No 423
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.66 E-value=5.7e-09 Score=107.89 Aligned_cols=187 Identities=18% Similarity=0.221 Sum_probs=118.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
+.||.|.|+-|+|+.. +|+..|+|+.. + ..+-. .++. +
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin----------~------~k~~~----------~~~e--------------~ 56 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIIN----------T------KKLSA----------RDFQ--------------K 56 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhh----------h------hhhcc----------ccHH--------------H
Confidence 4589999999999988 69998888761 1 11100 0111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhhh-hcCCCHHHHHHHHHHHHHHHHHhCC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLD-ELGVDRKRLGRYAVESYLEQILSHG 461 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~-~~~~d~~~la~~li~~~l~qI~~~G 461 (773)
+.+||+ +.+++++..-+..-+-|.+ .+-.+||.|+++|..|-. +.+-. -...+.....+.+++ .+..+|..|
T Consensus 57 l~rEar----IC~~LqHP~IvrL~~ti~~-~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLe-al~yCH~n~ 130 (355)
T KOG0033|consen 57 LEREAR----ICRKLQHPNIVRLHDSIQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-ALAYCHSNG 130 (355)
T ss_pred HHHHHH----HHHhcCCCcEeehhhhhcc-cceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence 345554 3445544333333333321 245799999999988753 22110 000111122222222 245567899
Q ss_pred CccCCCCCCceEEecc-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 004115 462 FFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 540 (773)
Q Consensus 462 ffHaDpHPGNILV~~~-~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~ 540 (773)
++|||++|.|+++... +..-++|.|||++..++... ++ .-..+.|.+++++.+.-.-.....|+++-...+.
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~------~~-~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLf 203 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE------AW-HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 203 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCcc------cc-ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHH
Confidence 9999999999999642 23469999999999998432 12 2246889999999999888888899998887776
Q ss_pred HHHHH
Q 004115 541 FFLNS 545 (773)
Q Consensus 541 ~~l~~ 545 (773)
.++..
T Consensus 204 iLL~G 208 (355)
T KOG0033|consen 204 ILLVG 208 (355)
T ss_pred HHHhC
Confidence 66544
No 424
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=8.4e-08 Score=105.69 Aligned_cols=191 Identities=16% Similarity=0.189 Sum_probs=109.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHH-HHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE-CASVLYQEI 382 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E-~~~~l~~El 382 (773)
.-+|.|+|+.||+|.+ ..+.|||||-+-+ -+|.+--.| +-+...+|-
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN------------------------------K~WrdEKKeNYhKHAcREy 518 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN------------------------------KNWRDEKKENYHKHACREY 518 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc------------------------------cchhhHhhhhHHHHHHHHH
Confidence 4689999999999998 5789999986211 133321111 112222222
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeecc---CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEY---TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQ 456 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~---st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~---~~l~q 456 (773)
+. .+.+ +++ ++.+.|.-+ +...+-|.|||+|-.|+=+...... ...++ |+.++- ..|..
T Consensus 519 rI----------HKeL-DHp--RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-mSEKE-ARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 519 RI----------HKEL-DHP--RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-MSEKE-ARSIIMQIVNALKY 583 (775)
T ss_pred hh----------hhcc-Ccc--eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh-hhHHH-HHHHHHHHHHHHHH
Confidence 22 2222 222 333444322 3455889999999988766432111 12222 222221 22344
Q ss_pred HH--hCCCccCCCCCCceEEec-cCCCcEEEEeecceeccChhhHHHHHHH-HHHHhhcCHHHHHHHHHHcCCCCC----
Q 004115 457 IL--SHGFFHADPHPGNIAVDD-VNGGRLIFYDFGMMGSISPNIREGLLEA-FYGIYEKDADKVLQAMVQMGVLVP---- 528 (773)
Q Consensus 457 I~--~~GffHaDpHPGNILV~~-~~~g~I~LlDFGlv~~Ls~~~r~~l~~l-~~al~~~D~~~i~~~l~~lG~~~~---- 528 (773)
+- ...++|-|+||||||+.. ..-|.|++.|||+.+.++++.-.....+ +..-..+.+-++-++..-.|.-.|
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsn 663 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISN 663 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccc
Confidence 43 457999999999999863 1237899999999998876543322111 112235667777766655554333
Q ss_pred CCChHHHHHHHHH
Q 004115 529 TGDTTAVRRTAQF 541 (773)
Q Consensus 529 ~~D~~~l~~~i~~ 541 (773)
.+|++++....+.
T Consensus 664 KVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 664 KVDVWSVGVIFYQ 676 (775)
T ss_pred ceeeEeeehhhhh
Confidence 3578887765443
No 425
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.64 E-value=2.1e-07 Score=95.46 Aligned_cols=107 Identities=21% Similarity=0.246 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccC------CCeEEEEeecCCC-Chhhhhhhh-hcCCC-HHHHHHHHHHHH
Q 004115 383 DYTQEAANAELFASNFKDMDYVKVPTIFWEYT------TPQILTMEYVPGI-KINRIQSLD-ELGVD-RKRLGRYAVESY 453 (773)
Q Consensus 383 Df~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s------t~~vLVMEyieG~-~L~d~~~l~-~~~~d-~~~la~~li~~~ 453 (773)
...+|.+|+.++.+ .+|.+|+++.-.. .+.+|+||+++|. +|.++.... ..... ...+. ..+..+
T Consensus 57 ra~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll-~~l~~~ 130 (206)
T PF06293_consen 57 RAKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELL-RALARL 130 (206)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHH-HHHHHH
Confidence 46778889988876 3577887765222 2349999999995 688765321 11111 22232 234556
Q ss_pred HHHHHhCCCccCCCCCCceEEeccC-CCcEEEEeecceeccCh
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISP 495 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~-~g~I~LlDFGlv~~Ls~ 495 (773)
+..+|..|++|+|++|+|||+.+.. ..++.+|||+-+..-..
T Consensus 131 i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~ 173 (206)
T PF06293_consen 131 IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS 173 (206)
T ss_pred HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence 8889999999999999999998621 12799999998886553
No 426
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.63 E-value=1.3e-08 Score=116.69 Aligned_cols=173 Identities=22% Similarity=0.274 Sum_probs=105.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-+|||++|-||||+. +|+.+|||+.+=...+ |+. .+.+|+-
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~d----------------------------d~~--------~iqqei~ 64 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD----------------------------DFS--------GIQQEIG 64 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCc----------------------------ccc--------cccccee
Confidence 4699999999999999 7999999988321111 111 1222322
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc--CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHh
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILS 459 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~--st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~--~l~qI~~ 459 (773)
..+|.+ +-.+|..+..| ..+.+++||||.|+++.|+-... ..+...+++...-+. -++.+|.
T Consensus 65 ~~~dc~-------------h~nivay~gsylr~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs 130 (829)
T KOG0576|consen 65 MLRDCR-------------HPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHS 130 (829)
T ss_pred eeecCC-------------CcChHHHHhhhhhhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhc
Confidence 222322 11111112111 23569999999999999864321 223344444433332 3788999
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCChHHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVR 536 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~---~~~~~D~~~l~ 536 (773)
.|-+|||+|-+||++++ .|.+++.|||..++++...-.. .-.-+.+..+++++..++. .....|.+++.
T Consensus 131 ~gk~hRdiKGanilltd--~gDvklaDfgvsaqitati~Kr------ksfiGtpywmapEvaaverkggynqlcdiwa~g 202 (829)
T KOG0576|consen 131 QGKIHRDIKGANILLTD--EGDVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG 202 (829)
T ss_pred CCcccccccccceeecc--cCceeecccCchhhhhhhhhhh------hcccCCccccchhHHHHHhcccccccccccccc
Confidence 99999999999999997 8999999999999987542111 0113455555555554432 22334555444
No 427
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.60 E-value=1.9e-07 Score=97.01 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=82.1
Q ss_pred CCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHH--HHHHHHHHHhCC--CccCCCCCCceEEeccCCCcEEEEe
Q 004115 414 TTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQILSHG--FFHADPHPGNIAVDDVNGGRLIFYD 486 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l-~--~~~~d~~~la~~l--i~~~l~qI~~~G--ffHaDpHPGNILV~~~~~g~I~LlD 486 (773)
+...||+..|..-+++.|.... . +.-++..++.... +...++++|+.. +.|+|+||+||++.+ ++.+++.|
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~vl~D 172 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPVLMD 172 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceEEEe
Confidence 4557999999888888774432 2 2234556665544 445589999998 999999999999986 79999999
Q ss_pred ecceeccChh--hHHHHHHHH-HHHhhcCHHHHHHHHHHc---CCCCCCCChHHHHHHHHHHH
Q 004115 487 FGMMGSISPN--IREGLLEAF-YGIYEKDADKVLQAMVQM---GVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 487 FGlv~~Ls~~--~r~~l~~l~-~al~~~D~~~i~~~l~~l---G~~~~~~D~~~l~~~i~~~l 543 (773)
||.+..-+-. .+....++= .+--.-...+=++++... ..++..+|.+++.-.++.++
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 9999875432 222221110 010011112223444332 34567789999998877664
No 428
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.57 E-value=1.1e-06 Score=88.92 Aligned_cols=140 Identities=26% Similarity=0.387 Sum_probs=81.2
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
+|++.|..++||+.+.++..+++|+-++. . . .-...
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~-~-~------------------------------------------~~~~~ 38 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP-D-A------------------------------------------AERLR 38 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH-H-H------------------------------------------HHHHH
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC-C-C------------------------------------------HHHHH
Confidence 68999999999999996679999987543 0 0 11233
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhh------hh-----------hhhhc--C--
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINR------IQ-----------SLDEL--G-- 439 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d------~~-----------~l~~~--~-- 439 (773)
.|+..+..+.+. .+.+|+++. ......+++|+|++|.++.+ .. .+... .
T Consensus 39 ~e~~~~~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~ 113 (239)
T PF01636_consen 39 REAAVLRQLAEH-----GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFS 113 (239)
T ss_dssp HHHHHHHHHHHT-----TSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCC
T ss_pred HHHHHHHHHHhc-----CCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccc
Confidence 555555555542 236888887 22334699999999998877 00 01111 0
Q ss_pred -CC--H--------H------------------HHHHHHHHHHHHHHH---hCCCccCCCCCCceEEeccCCCcEEEEee
Q 004115 440 -VD--R--------K------------------RLGRYAVESYLEQIL---SHGFFHADPHPGNIAVDDVNGGRLIFYDF 487 (773)
Q Consensus 440 -~d--~--------~------------------~la~~li~~~l~qI~---~~GffHaDpHPGNILV~~~~~g~I~LlDF 487 (773)
.. . . .+...+++.+...+. ..+++|+|+||+||++++ .++++.++||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~-~~~~i~iID~ 192 (239)
T PF01636_consen 114 PFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDP-SDGRIGIIDF 192 (239)
T ss_dssp CHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEES-STTEEEE--G
T ss_pred ccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeee-ccceeEEEec
Confidence 00 0 0 000001111111221 356999999999999983 3677899999
Q ss_pred cceeccCh
Q 004115 488 GMMGSISP 495 (773)
Q Consensus 488 Glv~~Ls~ 495 (773)
+.++.-++
T Consensus 193 e~a~~~~~ 200 (239)
T PF01636_consen 193 EDAGWGDP 200 (239)
T ss_dssp TT-EEEET
T ss_pred ccceECCH
Confidence 99987655
No 429
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.57 E-value=5.7e-08 Score=103.45 Aligned_cols=192 Identities=20% Similarity=0.238 Sum_probs=112.1
Q ss_pred hhhhhhccCcccccccceeEEEEEee-c--C---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 296 LDDVFERFDVEPIAAASLGQVHRARL-K--G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 296 ~~eiF~~fd~~PIgsaSiGQVhrA~l-~--G---~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
++++|.+-...-||+|.+|-||+|+- + + .++|||...- .. |
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~-------------------------~k-----d--- 66 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKG-------------------------EK-----D--- 66 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhc-------------------------cC-----C---
Confidence 34555443346699999999999976 2 2 2455553210 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH
Q 004115 370 IYDECASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR 447 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~--Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~ 447 (773)
..-++.+..+|+.+.+|.+ |+..+.+ |+-......+|+.||.+- .|-++......... +.+-.
T Consensus 67 -~tGiS~SAcREiaL~REl~h~nvi~Lv~------------Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~ 131 (438)
T KOG0666|consen 67 -GTGISMSACREIALLRELKHPNVISLVK------------VFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPR 131 (438)
T ss_pred -CCCcCHHHHHHHHHHHHhcCCcchhHHH------------HHhccCceEEEEehhhhh-hHHHHHHHhccchh-ccCCH
Confidence 0123445667888888875 4444443 333334566899999875 44444332221111 12223
Q ss_pred HHHHHH-------HHHHHhCCCccCCCCCCceEEec--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCH-----
Q 004115 448 YAVESY-------LEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDA----- 513 (773)
Q Consensus 448 ~li~~~-------l~qI~~~GffHaDpHPGNILV~~--~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~----- 513 (773)
..+++. +..+|++=++|||+||.||+|.. ++.|++++.|+|+++.+..... -+...|+
T Consensus 132 ~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plk--------pl~s~d~VVVTi 203 (438)
T KOG0666|consen 132 SMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLK--------PLASLDPVVVTI 203 (438)
T ss_pred HHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccc--------ccccCCceEEEE
Confidence 333333 45567888999999999999984 1238999999999987644322 2222232
Q ss_pred -HHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 514 -DKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 514 -~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
..+-+.++..--.++..|++++.-...+++
T Consensus 204 WYRAPELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 204 WYRAPELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred EecChHHhcccccccchhhhHHHHHHHHHHH
Confidence 122233444444567789999887665554
No 430
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.51 E-value=1.9e-07 Score=97.99 Aligned_cols=121 Identities=16% Similarity=0.197 Sum_probs=76.7
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
+.-.|.||||++-++|..-......|....+.....+.+.+..+|+.+++|||+|..||||-+.+.-+++|+|||.....
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred CceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 44568999999988887632222223333333334455668889999999999999999997655679999999998876
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCChHHHHHHH
Q 004115 494 SPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTA 539 (773)
Q Consensus 494 s~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~-~~~~~D~~~l~~~i 539 (773)
+..... .-......+..+.+.+.+-.+ ..|..|.++|.-.+
T Consensus 174 g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~ 215 (378)
T KOG1345|consen 174 GTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIF 215 (378)
T ss_pred Cceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeee
Confidence 543211 112223333444444433222 34567888776543
No 431
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.50 E-value=1.9e-08 Score=104.32 Aligned_cols=186 Identities=15% Similarity=0.195 Sum_probs=104.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|+|.||.|++|+. .|+.||+|.. +++. .-.+ |.....+|++
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkv--------------------lmen---eKeG-----------fpitalreik 68 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKV--------------------LMEN---EKEG-----------FPITALREIK 68 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHH--------------------HHhc---cccC-----------CcHHHHHHHH
Confidence 4699999999999998 5888998854 1110 0001 1112233444
Q ss_pred HHHHH-----HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHH
Q 004115 384 YTQEA-----ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQ 456 (773)
Q Consensus 384 f~~EA-----~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~--li~~~l~q 456 (773)
...-. .|+..+.+.+.. +.. .+....+|||.+|+- .|.-+.......+....+-.. .+-..+..
T Consensus 69 iL~~lkHenv~nliEic~tk~T-p~~-------r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~ 139 (376)
T KOG0669|consen 69 ILQLLKHENVVNLIEICRTKAT-PTN-------RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYY 139 (376)
T ss_pred HHHHhcchhHHHHHHHHhhccC-Ccc-------cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHH
Confidence 44331 244444333322 111 133457999999974 222222212222333333222 23344778
Q ss_pred HHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhH---HHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChH
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR---EGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 533 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r---~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~ 533 (773)
||+..++|||.||.|+||+. +|.+++.|||+++.++.... ..+.+-+..+.-+.++.+ +.-.-..+..|++
T Consensus 140 iHr~kilHRDmKaaNvLIt~--dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll----LG~r~yg~~iDiW 213 (376)
T KOG0669|consen 140 IHRNKILHRDMKAANVLITK--DGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL----LGDREYGPPIDIW 213 (376)
T ss_pred HHHhhHHhhcccHhhEEEcC--CceEEeeccccccceecccccCCCCcccceeeeecCCHHHh----hcccccCCcchhH
Confidence 99999999999999999985 89999999999987754321 113333333334444433 2222234567777
Q ss_pred HHHHHHH
Q 004115 534 AVRRTAQ 540 (773)
Q Consensus 534 ~l~~~i~ 540 (773)
...-.+.
T Consensus 214 gAgCima 220 (376)
T KOG0669|consen 214 GAGCIMA 220 (376)
T ss_pred hHHHHHH
Confidence 6554443
No 432
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.50 E-value=2.9e-07 Score=104.52 Aligned_cols=181 Identities=20% Similarity=0.248 Sum_probs=110.4
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 382 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 382 (773)
..|+|+|.+|||..|++ +...|+||... ++.|-.|- |++ ++ ++-.+ ..|+
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~---KeRIL~Dt--------Wvr--Dr-------kLGtV--------p~EI 617 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIF---KERILVDT--------WVR--DR-------KLGTV--------PSEI 617 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehh---hhhhhhhh--------hhc--cc-------ccCcc--------chhH
Confidence 38999999999999999 46799999762 22222221 111 11 11111 1122
Q ss_pred HHHH--H---HHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeec-CCCChhhhhhhhhcCCC--HHHHHHHHHHHHH
Q 004115 383 DYTQ--E---AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYV-PGIKINRIQSLDELGVD--RKRLGRYAVESYL 454 (773)
Q Consensus 383 Df~~--E---A~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyi-eG~~L~d~~~l~~~~~d--~~~la~~li~~~l 454 (773)
.... + ..|+.++-..|.++ ...||+||-- +|+.|-|+...+.. ++ ..++.-..+.+..
T Consensus 618 qIla~l~~~sH~NIlKlLdfFEdd-------------d~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi 683 (772)
T KOG1152|consen 618 QILATLNKHSHENILKLLDFFEDD-------------DYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGI 683 (772)
T ss_pred HHHHHhhhcCccchhhhhheeecC-------------CeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcc
Confidence 2211 1 23666665555543 3457888854 57778787654432 22 2233333455557
Q ss_pred HHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChH
Q 004115 455 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTT 533 (773)
Q Consensus 455 ~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~ 533 (773)
+++|..|++|||+|-.|+.++. +|-++|||||.+......- . -++.+..++++++++.- .+.....|.+
T Consensus 684 ~hlh~~~ivhrdikdenvivd~--~g~~klidfgsaa~~ksgp----f----d~f~gtv~~aapevl~g~~y~gk~qdiw 753 (772)
T KOG1152|consen 684 KHLHDQGIVHRDIKDENVIVDS--NGFVKLIDFGSAAYTKSGP----F----DVFVGTVDYAAPEVLGGEKYLGKPQDIW 753 (772)
T ss_pred ccccccCceecccccccEEEec--CCeEEEeeccchhhhcCCC----c----ceeeeeccccchhhhCCCccCCCcchhh
Confidence 7889999999999999999985 8999999999887653221 1 12345667777777642 2333445777
Q ss_pred HHHH
Q 004115 534 AVRR 537 (773)
Q Consensus 534 ~l~~ 537 (773)
++.-
T Consensus 754 algi 757 (772)
T KOG1152|consen 754 ALGI 757 (772)
T ss_pred hhhh
Confidence 7654
No 433
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.49 E-value=2e-07 Score=106.95 Aligned_cols=194 Identities=16% Similarity=0.101 Sum_probs=119.5
Q ss_pred CCChhhhhhccCcccccccceeEEEEEee--cCeeEE---EEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004115 293 GAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVV---VKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 367 (773)
Q Consensus 293 G~~~~eiF~~fd~~PIgsaSiGQVhrA~l--~G~~VA---VKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~ 367 (773)
+.++...|-.|++ -||.|++=.||+|.+ +|-+|| ||+. .+.+ +.
T Consensus 34 e~~p~gRy~k~~e-vLGrGafKtVYka~De~~giEVAWnqvk~~-------------------d~~q-----------~~ 82 (632)
T KOG0584|consen 34 EKDPTGRYLKFDE-VLGRGAFKTVYKAFDEEEGIEVAWNQVKIR-------------------DVTQ-----------SP 82 (632)
T ss_pred ccCCCCceeehhh-hcccccceeeeeccccccchhhHHHHHhHH-------------------Hhhc-----------Ch
Confidence 4566666777775 699999999999998 566655 2211 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecCCCChhhhhhhhhcCCCHHHH
Q 004115 368 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRL 445 (773)
Q Consensus 368 ~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~--~vLVMEyieG~~L~d~~~l~~~~~d~~~l 445 (773)
+-.+. |..|++-+.. +++ ++|.--.-+|.-... ..+++|.+.+++|..+.. +....+.+.+
T Consensus 83 -----~~leR------~~~Ev~lLKs----L~H-~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~k-k~~~vn~kai 145 (632)
T KOG0584|consen 83 -----EELER------LYSEVHLLKS----LKH-PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRK-KHRRVNIKAI 145 (632)
T ss_pred -----HHHHH------HHHHHHHHcc----CCC-CceeeeeeheecCCCceeeeeeecccCCcHHHHHH-HhccCCHHHH
Confidence 01122 3333332222 222 222222223333333 589999999999998753 2222343322
Q ss_pred HHH--HHHHHHHHHHhC--CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 446 GRY--AVESYLEQILSH--GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 446 a~~--li~~~l~qI~~~--GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
-.- .+-.-|..+|.+ -++|||+|-.||||+. +.|.+++-|.|++..+....- +-+-+.|+.|+++|.
T Consensus 146 k~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~VKIGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmY 216 (632)
T KOG0584|consen 146 KSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEVKIGDLGLATLLRKSHA--------KSVIGTPEFMAPEMY 216 (632)
T ss_pred HHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCceeecchhHHHHhhcccc--------ceeccCccccChHHH
Confidence 111 111223444543 5999999999999986 689999999999987654432 224589999999999
Q ss_pred HcCCCCCCCChHHHHHHHHHHHH
Q 004115 522 QMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 522 ~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+-++ ...+|+++|.--+-+|..
T Consensus 217 EE~Y-nE~VDVYaFGMCmLEMvT 238 (632)
T KOG0584|consen 217 EENY-NELVDVYAFGMCMLEMVT 238 (632)
T ss_pred hhhc-chhhhhhhhhHHHHHHHh
Confidence 9665 677899999876655543
No 434
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.48 E-value=1.3e-06 Score=89.32 Aligned_cols=183 Identities=18% Similarity=0.188 Sum_probs=107.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
..+|.|++|+||+|... ..+++|+..+...... .....|.
T Consensus 6 ~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~---------------------------------------~~~~~~~ 45 (384)
T COG0515 6 RKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS---------------------------------------KEVERFL 45 (384)
T ss_pred EeecCCCCeEEEEEEec-cEEEEEeechhhccch---------------------------------------hHHHHHH
Confidence 46889999999999998 8899998855443221 0112334
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhc--CCCHHHHHHHHHH--HHHHHHHh
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDEL--GVDRKRLGRYAVE--SYLEQILS 459 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~--~~d~~~la~~li~--~~l~qI~~ 459 (773)
+|..-...+ .+.+ .+...+..+. ...+++|+|++|..+.++...... ............+ ..+..+|.
T Consensus 46 ~e~~~~~~~----~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~ 119 (384)
T COG0515 46 REIQILASL----NHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS 119 (384)
T ss_pred HHHHHHHHc----cCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 444322222 2221 1222222222 225999999999999965432221 2333333322222 22568999
Q ss_pred CCCccCCCCCCceEEeccCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc---CCCCCCCChHHH
Q 004115 460 HGFFHADPHPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM---GVLVPTGDTTAV 535 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g-~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~l---G~~~~~~D~~~l 535 (773)
.|++|+|++|.||+++. .+ .++++|||++..+.................+...++.+..... .......|.+++
T Consensus 120 ~~~~hrd~kp~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~ 197 (384)
T COG0515 120 KGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197 (384)
T ss_pred CCeeccCCCHHHeeecC--CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHH
Confidence 99999999999999985 55 7999999999866544321110001122234555566666554 345556677766
Q ss_pred H
Q 004115 536 R 536 (773)
Q Consensus 536 ~ 536 (773)
.
T Consensus 198 g 198 (384)
T COG0515 198 G 198 (384)
T ss_pred H
Confidence 5
No 435
>PRK10593 hypothetical protein; Provisional
Probab=98.47 E-value=7e-06 Score=89.13 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCC
Q 004115 283 TAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDG 362 (773)
Q Consensus 283 ~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~ 362 (773)
.+++.+.+.+|..+. +.++|+.|.+++||+-...+..++||+.+.....
T Consensus 3 ~~~~~~~~~~~~~~~------~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~------------------------- 51 (297)
T PRK10593 3 QLRAELSHLLGEKLS------RVECISEQPYAALWALYDSQGNPMPLMARSFSTP------------------------- 51 (297)
T ss_pred HHHHHHHHHhchhhh------eeeecCCccceeEEEEEcCCCCEEEEEecccccc-------------------------
Confidence 455666777775332 3479999999999999885446888986321100
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-----CCCeEEEEeecCCCCh
Q 004115 363 AKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-----TTPQILTMEYVPGIKI 429 (773)
Q Consensus 363 ~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~-----st~~vLVMEyieG~~L 429 (773)
-.|..|+.+++.+++. ..|.||+|+... .+..+|||||++|.++
T Consensus 52 -------------------~~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 -------------------GVAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred -------------------hHHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 0367889988888652 358999999521 3568999999999876
No 436
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.47 E-value=8.3e-08 Score=102.68 Aligned_cols=128 Identities=18% Similarity=0.214 Sum_probs=88.3
Q ss_pred cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCCccCCCCCCceEEeccCCCc
Q 004115 404 VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIAVDDVNGGR 481 (773)
Q Consensus 404 V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~--~l~qI~~~GffHaDpHPGNILV~~~~~g~ 481 (773)
+..|.-..+.-.+.++|||++++ .+.++.. ...|.+.+...+.+. ..+.+|+.|++|||+||.||++.. +..
T Consensus 83 ~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~ 156 (369)
T KOG0665|consen 83 VFTPQKTLEEFQEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCT 156 (369)
T ss_pred ccCccccHHHHHhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhh
Confidence 44454444444567999999987 4444433 445666666665554 478899999999999999999985 889
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 482 LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 482 I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
++++|||++..-+..++. ... +..-+..+.+..+.+| ..+.+|+++++-...+++.
T Consensus 157 lKi~dfg~ar~e~~~~~m--tpy----VvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~ 212 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDFMM--TPY----VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELIL 212 (369)
T ss_pred eeeccchhhcccCccccc--Cch----hheeeccCchheeccC-CcccchhhhhhhHHHHHhh
Confidence 999999999877665221 111 1222344556677888 5677899988876666553
No 437
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.43 E-value=1e-05 Score=84.36 Aligned_cols=164 Identities=23% Similarity=0.268 Sum_probs=93.8
Q ss_pred ccccc-ceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 307 PIAAA-SLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 307 PIgsa-SiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||..| |-++||+...++..++||+..+.- .-++.
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---------------------------------------------~~~~~ 39 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP---------------------------------------------TYELE 39 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCc---------------------------------------------ccchH
Confidence 44444 448999998877899999873221 01244
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCC--CeEEEEeecCCCChhhhhh-----------------hhhc-----CCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQS-----------------LDEL-----GVD 441 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st--~~vLVMEyieG~~L~d~~~-----------------l~~~-----~~d 441 (773)
.|++.+..+.+. +.+|+++..... ..+++|||++|.++.+... +... ..+
T Consensus 40 ~E~~~l~~l~~~------~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~ 113 (244)
T cd05150 40 REAERLRWLAGK------LPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFD 113 (244)
T ss_pred HHHHHHHHHHhc------CCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcc
Confidence 577777666542 678999864433 4699999999998875310 0000 000
Q ss_pred H---HHHHH--HH-------------------HHHHHHHHH-------hCCCccCCCCCCceEEeccCCCcEEEEeecce
Q 004115 442 R---KRLGR--YA-------------------VESYLEQIL-------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 490 (773)
Q Consensus 442 ~---~~la~--~l-------------------i~~~l~qI~-------~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv 490 (773)
. ..+.. .. ....+..+. ...++|+|+||+||++++ ++.+.+|||+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~--~~~~~iIDwe~a 191 (244)
T cd05150 114 RRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDP--GKFSGFIDLGRL 191 (244)
T ss_pred hhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeC--CcEEEEEEcccc
Confidence 0 00000 00 111122221 245899999999999985 556789999999
Q ss_pred eccChhhHHHHHHHHHHHhhc--CHHHHHHHHHHcCC
Q 004115 491 GSISPNIREGLLEAFYGIYEK--DADKVLQAMVQMGV 525 (773)
Q Consensus 491 ~~Ls~~~r~~l~~l~~al~~~--D~~~i~~~l~~lG~ 525 (773)
+.=++.. .++.++..+... +.......+...|.
T Consensus 192 ~~gdp~~--Dla~~~~~~~~~~~~~~~~~~f~~~Y~~ 226 (244)
T cd05150 192 GVADRYQ--DLALAVRSLRENLGGEEYAARFLDRYGI 226 (244)
T ss_pred ccccHHH--HHHHHHHHhhhhcCChHHHHHHHHHcCC
Confidence 8655432 233333322221 34455444545554
No 438
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.43 E-value=9.7e-07 Score=100.98 Aligned_cols=143 Identities=22% Similarity=0.278 Sum_probs=97.4
Q ss_pred ccccccceeEEEEEee----cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL----KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 379 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l----~G~--~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 379 (773)
..||.|-||-||.|+. +|+ .||||+=+.+-. +.+
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t------------------------------~d~---------- 434 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT------------------------------PDD---------- 434 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCC------------------------------hhh----------
Confidence 4699999999999998 254 477886532211 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004115 380 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 457 (773)
Q Consensus 380 ~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI 457 (773)
.| .|..||--|+.| .+..-|..--|.. ....|+|||.++-+.|..+.+..+..++...+.... +...+..+
T Consensus 435 te-kflqEa~iMrnf----dHphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYL 507 (974)
T KOG4257|consen 435 TE-KFLQEASIMRNF----DHPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYL 507 (974)
T ss_pred HH-HHHHHHHHHHhC----CCcchhheeeeee--ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 11 477888666554 3322233333332 245699999999999988876555444444333322 33447778
Q ss_pred HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhh
Q 004115 458 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 497 (773)
Q Consensus 458 ~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~ 497 (773)
++..|+|||+-.-||||.. ...++|.|||+.+.++++.
T Consensus 508 eSkrfVHRDIAaRNiLVsS--p~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 508 ESKRFVHRDIAARNILVSS--PQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred HhhchhhhhhhhhheeecC--cceeeecccchhhhccccc
Confidence 8999999999999999985 6789999999999987654
No 439
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.41 E-value=1.7e-06 Score=90.30 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=81.8
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
.+||++|.-+-||+. .|..+++|+.+|+.... +.
T Consensus 6 ~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~--------------------------------------------~i 39 (226)
T TIGR02172 6 WTQTGEGGNGESYTH--KTGKWMLKLYNPGFDKE--------------------------------------------TI 39 (226)
T ss_pred heeecCCCCcceeEe--cCCCEEEEeCCCCCCHH--------------------------------------------HH
Confidence 379999999999984 36678899886643111 22
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCC-hhhhh---------------h----hhhc---C
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIK-INRIQ---------------S----LDEL---G 439 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~-L~d~~---------------~----l~~~---~ 439 (773)
.+|++.+..+.. .++.+|+++.- ......++|||++|.+ +.+.. . +... +
T Consensus 40 ~~E~~~l~~l~~-----~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~ 114 (226)
T TIGR02172 40 KREFDASRKVFS-----LGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDT 114 (226)
T ss_pred HHHHHHHHHHHH-----cCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 456666666653 24678888753 4455688999999974 11100 0 1110 1
Q ss_pred CCHHHHHH-----------------HHHHHHHHHH-HhCCCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 440 VDRKRLGR-----------------YAVESYLEQI-LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 440 ~d~~~la~-----------------~li~~~l~qI-~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
........ ..+..++..+ -...+.|+|+|||||++++ ++ +.+|||+.++.=++
T Consensus 115 ~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~--~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 115 STFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSG--KG-TYWIDLGDFGYGNP 185 (226)
T ss_pred CcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcC--CC-cEEEechhcCcCCH
Confidence 01000000 0011111111 1345789999999999985 55 99999999885544
No 440
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.32 E-value=4.3e-06 Score=99.35 Aligned_cols=181 Identities=15% Similarity=0.097 Sum_probs=112.7
Q ss_pred cccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004115 307 PIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 377 (773)
Q Consensus 307 PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 377 (773)
++|+|.||||++|.+. ...||||..+....+.
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~--------------------------------------- 343 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSS--------------------------------------- 343 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcH---------------------------------------
Confidence 9999999999999972 2479999886554331
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCC
Q 004115 378 LYQEIDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVD 441 (773)
Q Consensus 378 l~~ElDf~~EA~Nl~rf~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~~~d 441 (773)
+.-++..|...+....+ +++ +........ .+..++|+||++.+.|.++..... ..+.
T Consensus 344 --~~~~~~~El~~m~~~g~----H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~ 416 (609)
T KOG0200|consen 344 --EKKDLMSELNVLKELGK----HPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALT 416 (609)
T ss_pred --HHHHHHHHHHHHHHhcC----Ccchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcC
Confidence 01123333333333321 222 222222222 456899999999999998765433 1133
Q ss_pred HHHHHHHHHHHH--HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcC-----HH
Q 004115 442 RKRLGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKD-----AD 514 (773)
Q Consensus 442 ~~~la~~li~~~--l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D-----~~ 514 (773)
...+.....+.+ ++.+.+..++|||+-.-|||+.. +..+++.|||+++...+..-.. ..++ ..
T Consensus 417 ~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~--~~~~kIaDFGlar~~~~~~~y~--------~~~~~~~LP~k 486 (609)
T KOG0200|consen 417 TKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK--NKVIKIADFGLARDHYNKDYYR--------TKSSAGTLPVK 486 (609)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC--CCEEEEccccceeccCCCCceE--------ecCCCCcccee
Confidence 444444433333 56677899999999999999985 6789999999999654432110 0111 12
Q ss_pred HHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 004115 515 KVLQAMVQMGVLVPTGDTTAVRRTAQFFL 543 (773)
Q Consensus 515 ~i~~~l~~lG~~~~~~D~~~l~~~i~~~l 543 (773)
.|+++.+.-...+...|++++...+.+++
T Consensus 487 WmApEsl~~~~ft~kSDVWSfGI~L~Eif 515 (609)
T KOG0200|consen 487 WMAPESLFDRVFTSKSDVWSFGILLWEIF 515 (609)
T ss_pred ecCHHHhccCcccccchhhHHHHHHHHHh
Confidence 44445554456667789999987665543
No 441
>PRK05231 homoserine kinase; Provisional
Probab=98.28 E-value=1.3e-05 Score=86.96 Aligned_cols=50 Identities=8% Similarity=0.090 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEec
Q 004115 277 PPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQR 332 (773)
Q Consensus 277 pp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqr 332 (773)
.+.+.+++.+++ +.+|. .++ .+.++++.|...++|+...++..+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQGEYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCCCcEEEEEec
Confidence 355667777777 55664 111 133689999999999998855578999863
No 442
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.28 E-value=1.1e-05 Score=88.72 Aligned_cols=188 Identities=17% Similarity=0.164 Sum_probs=121.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
-.|..|--+-||.|+- +|..+||||-+..|----.+|-.+ ..=+ ++-.. -..-++..++.-++
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV----~GEf-RFRhg--yck~NPRKMVk~WA--------- 213 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYV----SGEF-RFRHG--YCKHNPRKMVKTWA--------- 213 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhc----ccee-eeecc--cccCCcHHHHHHHH---------
Confidence 3688899999999999 899999999877664322222111 0000 00000 11236666776665
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCC
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHG 461 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~---la~~li~~~l~qI~~~G 461 (773)
..|.+|+.|+.. .+|.+|+++ +-...||||+|+.+-... ...+....+.+.+ +...++...-.+...++
T Consensus 214 EKE~RNLkRl~~-----aGIP~PePI--lLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~ 285 (520)
T KOG2270|consen 214 EKEMRNLKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRLYQKCR 285 (520)
T ss_pred HHHHHHHHHHHh-----cCCCCCCce--eeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 357889999865 458888888 467789999999642111 1112222233222 22233333333345789
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 527 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~ 527 (773)
++|+|+.--|+|+. +|++.+||-+..-..+......|+ ..|...+-..+..+|+..
T Consensus 286 LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~v 341 (520)
T KOG2270|consen 286 LVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVAV 341 (520)
T ss_pred eeccchhhhhheEE---CCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCee
Confidence 99999999999997 799999999998888776554443 447777778888888643
No 443
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.23 E-value=5.8e-05 Score=85.21 Aligned_cols=110 Identities=22% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cC-eeEEEEEecCCccchHHHHHHHHHHHHHHHhh
Q 004115 278 PFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KG-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQK 355 (773)
Q Consensus 278 p~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~G-~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~ 355 (773)
++..+.+...+....|.- +--+..+.++++.|.+..||+.++ +| +.|+||...|.++..
T Consensus 6 ~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~----------------- 66 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVV----------------- 66 (401)
T ss_pred eCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccc-----------------
Confidence 344445555553333311 001233457999999999999999 55 589999876654311
Q ss_pred cCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCC
Q 004115 356 IDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIK 428 (773)
Q Consensus 356 ~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~ 428 (773)
+. .|.- ..| .+..|++.+..+.+. ....+|+||.-.....++||||+++.+
T Consensus 67 --g~------~wpl---------~~e-R~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 67 --GE------SWPL---------TLD-RARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred --cc------cccc---------cHH-HHHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence 00 0110 001 235566666666543 235799999876677899999999855
No 444
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.19 E-value=4.4e-05 Score=79.50 Aligned_cols=36 Identities=39% Similarity=0.670 Sum_probs=28.0
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
..+++|+|+||+||++++ ++...++||+.+..=++.
T Consensus 163 ~~~l~HGD~~~~Nvlv~~--~~i~giIDw~~a~~gDp~ 198 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQD--GRLSAVIDFGCLGVGDPA 198 (235)
T ss_pred CceEEeCCCCCCcEEEEC--CCEEEEEeCcccCcCChH
Confidence 346899999999999973 333569999998766553
No 445
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.16 E-value=2.2e-05 Score=78.81 Aligned_cols=125 Identities=25% Similarity=0.410 Sum_probs=88.2
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
.-+|.|..+-||.+.+.|.+||+|+||++.... ++.
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~--------------------------------------------~l~ 63 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGGEVALKVRRRDSPRR--------------------------------------------NLE 63 (201)
T ss_pred hhhhcccccEEEEeeccCceEEEEEecCCcchh--------------------------------------------hHH
Confidence 458999999999999999999999998765321 345
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCccC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 465 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffHa 465 (773)
.||+-++..+.. -..|++|. -++..+.|||++|.+|.++.. +.+++.+.+.+=.+| -+=..|+-|.
T Consensus 64 kEakiLeil~g~------~~~p~vy~--yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD~~GI~H~ 129 (201)
T COG2112 64 KEAKILEILAGE------GVTPEVYF--YGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLDRLGIEHG 129 (201)
T ss_pred HHHHHHHHhhhc------CCCceEEE--echhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHHHhccchh
Confidence 667666655432 24688883 466777799999999988642 125555544433322 1235789999
Q ss_pred CCC-C-CceEEeccCCCcEEEEeeccee
Q 004115 466 DPH-P-GNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 466 DpH-P-GNILV~~~~~g~I~LlDFGlv~ 491 (773)
.+| | -|+++. ++++.+|||--+.
T Consensus 130 El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 130 ELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred hhcCCceeEEec---CCcEEEEEccchh
Confidence 988 3 356654 5699999998776
No 446
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.16 E-value=7.3e-05 Score=78.80 Aligned_cols=138 Identities=20% Similarity=0.232 Sum_probs=84.2
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
.++..|-..++|+...+|+.+++|+..++.... .+|..
T Consensus 2 ~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~------------------------------------------~~~r~ 39 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHPGISFVWRPQSPVCKAL------------------------------------------GVDRQ 39 (256)
T ss_pred CcCCCcCcCCeEEEEeCCccEEEeeCCcccccc------------------------------------------cCcHH
Confidence 356778888999998888899999764332110 12445
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhh--------hh-------hhhc---C--CCHH-H
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRI--------QS-------LDEL---G--VDRK-R 444 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~--------~~-------l~~~---~--~d~~-~ 444 (773)
+|.+++..+.+. ++ .|+++.. ...+++|||++|.+++.. .. +... + .+.. .
T Consensus 40 ~E~~~l~~l~~~-----g~-~P~~i~~--~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~ 111 (256)
T TIGR02721 40 REYQILQALSAL-----GL-APKPILV--NEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKAR 111 (256)
T ss_pred HHHHHHHHHHhc-----CC-CCceEEE--eCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 666666666542 23 5888854 346899999999887531 00 1111 1 1111 1
Q ss_pred HHHH-----------HHHHHHHHHH--------hCCCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 445 LGRY-----------AVESYLEQIL--------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 445 la~~-----------li~~~l~qI~--------~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
+... .+...++.+. ...+.|+|+|||||++++ ++ +.+|||..++.=++.
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~--~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 112 IAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTP--QG-LKLIDWEYASDGDIA 179 (256)
T ss_pred HHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeC--CC-CEEEeccccCcCCHH
Confidence 1110 0111122222 236899999999999984 44 899999999877664
No 447
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.16 E-value=2.8e-06 Score=97.13 Aligned_cols=179 Identities=15% Similarity=0.103 Sum_probs=109.6
Q ss_pred ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
..+|-|.+|.||.|+++ .-.||||.++-+.-+ +. .
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---------------------------------ve----------E 309 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---------------------------------VE----------E 309 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh---------------------------------HH----------H
Confidence 56999999999999993 678999976322110 01 3
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHH--HHHHHHHHHHHHhC
Q 004115 384 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLG--RYAVESYLEQILSH 460 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-~~d~~~la--~~li~~~l~qI~~~ 460 (773)
|+.||..|+.+.+ ..-|..--|. ...-..|+++||+.-+.|-|+...... ....--+. ...+...+..+-..
T Consensus 310 FLkEAAvMKeikH----pNLVqLLGVC-T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 310 FLKEAAVMKEIKH----PNLVQLLGVC-THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred HHHHHHHHHhhcC----ccHHHHhhhh-ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 6667766655533 1111111111 122346999999998888887542211 11221122 22244557777789
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
+|+|||+-.-|-||.. +.-+++.|||+.+.+..++..+-+ -..--....+++-+......-..|+++|...+
T Consensus 385 nFIHRDLAARNCLVgE--nhiVKvADFGLsRlMtgDTYTAHA-----GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLL 456 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGE--NHIVKVADFGLSRLMTGDTYTAHA-----GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLL 456 (1157)
T ss_pred hhhhhhhhhhhccccc--cceEEeeccchhhhhcCCceeccc-----CccCcccccCcccccccccccchhhHHHHHHH
Confidence 9999999999999986 778999999999988776543321 11112223333334444445567888887543
No 448
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.09 E-value=2.1e-06 Score=104.87 Aligned_cols=128 Identities=6% Similarity=-0.088 Sum_probs=76.1
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEec-----------------
Q 004115 416 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDD----------------- 476 (773)
Q Consensus 416 ~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~----------------- 476 (773)
..+++|||.+ .+|.++.......++...+...+ +...+..+|..|++|||+||.|||+..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 3578889874 48888764333334544444433 234478899999999999999999963
Q ss_pred cCCCcEEEEeecceeccChhhHHHHHHH----------HHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 477 VNGGRLIFYDFGMMGSISPNIREGLLEA----------FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 477 ~~~g~I~LlDFGlv~~Ls~~~r~~l~~l----------~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
..++.+++.|||+++.........+... -.....+.+.+++++++.-+-.....|++++.-.+++++.
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~ 210 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC 210 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence 0123445555555543211000000000 0001123445788887765556778899999988877764
No 449
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.04 E-value=8e-05 Score=83.72 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=111.6
Q ss_pred CCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHH
Q 004115 275 QVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEY 352 (773)
Q Consensus 275 ~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~DL~il~~la~~ 352 (773)
...|+..+.+...+.+.+|. +..- +....++||-|-..-||++.+. ++.|+||--.|-++-
T Consensus 6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv--------------- 68 (409)
T PRK12396 6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI--------------- 68 (409)
T ss_pred cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc---------------
Confidence 44556666666666655551 1100 2233589999999999999983 678999976554431
Q ss_pred HhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhh
Q 004115 353 LQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRI 432 (773)
Q Consensus 353 l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~ 432 (773)
.+. .+.+.. .-+.|+..+..+.+.. | =.+|++|.-.....++|||+++...+-.-
T Consensus 69 ----~~s---wpL~~~--------------R~~~E~~aL~~~~~~~---P-~~VP~vy~~D~e~~~~vMEdL~~~~ilR~ 123 (409)
T PRK12396 69 ----SDE---FKLSTN--------------RIRIESDVLQLEEELA---P-GLVPKVYLFDSVMNCCVMEDLSDHTILRT 123 (409)
T ss_pred ----CCC---CCCChH--------------HHHHHHHHHHHHHhhC---C-CcCCeEEEECcHHhhHHHHhCcccHHHHH
Confidence 010 011222 1244665566555432 2 24999998777778999999976442210
Q ss_pred hhhhhc-----------------------------------CC-C---------------------H----HHHHHHHH-
Q 004115 433 QSLDEL-----------------------------------GV-D---------------------R----KRLGRYAV- 450 (773)
Q Consensus 433 ~~l~~~-----------------------------------~~-d---------------------~----~~la~~li- 450 (773)
.-+... .. + . ........
T Consensus 124 ~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~~~kk~~v~~f~N~eLc~itedlvft~Py~~~~~~n~~~~~~~~~~~~ 203 (409)
T PRK12396 124 ALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIRE 203 (409)
T ss_pred HHHcCCcChhHHHHHHHHHHHHHhhcchhccChHHHHHhhHhcCCHHHHHHhcccccccCcccchhccCCCChhhHHHHH
Confidence 000000 00 0 0 00000000
Q ss_pred -----------HHHHHHHH---hCCCccCCCCCCceEEeccCCCcEEEEe--ecceeccChhhHHHHHHHHHHHhhcC
Q 004115 451 -----------ESYLEQIL---SHGFFHADPHPGNIAVDDVNGGRLIFYD--FGMMGSISPNIREGLLEAFYGIYEKD 512 (773)
Q Consensus 451 -----------~~~l~qI~---~~GffHaDpHPGNILV~~~~~g~I~LlD--FGlv~~Ls~~~r~~l~~l~~al~~~D 512 (773)
-.-++.-| ....+|+|+||||||+++ ..++++| |+..|.+.-+.=..+.+++++-..++
T Consensus 204 ~l~~D~~Lk~ev~~Lk~~F~~~~~aLlHGDlHtGSI~v~~---~~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~ 278 (409)
T PRK12396 204 HIYSDKELRLEVAKLKFSFMTNAQALIHGDLHTGSVFVKN---DSTKVIDPEFAFYGPMGYDIGNVMANLMFAWVNAD 278 (409)
T ss_pred HHhcCHHHHHHHHHHHHHHHhcchhhccCcCCCCCEEecC---CceEEEcccccccCCcHHHHHHHHHHHHHHHhcCc
Confidence 00122222 356899999999999984 5689999 67778777776677777777766554
No 450
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.03 E-value=0.00018 Score=81.31 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=66.1
Q ss_pred CCCCCCHHHHHHHHHHH------hCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHH
Q 004115 275 QVPPFPSETAVSIVEEE------LGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRV 348 (773)
Q Consensus 275 ~vpp~p~~~v~~iie~e------lG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~ 348 (773)
...+++.+.+...+.+. +|.. +.....+++|-|....||+-+..+..|+||...|.+.-.
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~v---------- 70 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCI---------- 70 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCC----------
Confidence 34455555555554443 3321 233455789999999999988767789999887776421
Q ss_pred HHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCC
Q 004115 349 IAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPG 426 (773)
Q Consensus 349 la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG 426 (773)
+.. .+.+.. + -..|++.+....+. ..+.+|+||.-.....+++|||++|
T Consensus 71 ---------ga~--wpl~~~---R-----------~~~Ea~aL~~~~~~----~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 71 ---------GES--WPMTKE---R-----------AYFEATALREHGRL----CPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred ---------Ccc--ccCCcc---H-----------HHHHHHHHHHhhhc----CCCCCCeEEEECCCCCEEEEeecCC
Confidence 000 000111 0 12344455444332 3478999997666678999999988
No 451
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.02 E-value=2.5e-05 Score=85.63 Aligned_cols=177 Identities=13% Similarity=0.161 Sum_probs=106.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 383 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 383 (773)
.-+|.|.||+|-.+.. ++..|||||.+ .+.+ ..+..
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik---------------~V~k----------------------YreAa----- 132 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIK---------------NVDK----------------------YREAA----- 132 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHH---------------HHHH----------------------HhhHH-----
Confidence 4699999999999998 58899999863 1111 11111
Q ss_pred HHHHHHHHHHHHHhcCCCCcccc--ceeeeccCCCeEEEEeecCCCChhhhhhhhhcC---CCHH---HHHHHHHHHHHH
Q 004115 384 YTQEAANAELFASNFKDMDYVKV--PTIFWEYTTPQILTMEYVPGIKINRIQSLDELG---VDRK---RLGRYAVESYLE 455 (773)
Q Consensus 384 f~~EA~Nl~rf~~~f~~~~~V~v--P~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~---~d~~---~la~~li~~~l~ 455 (773)
+.|.+-++++.+.-.. ....+ -.-+-+|-+..++|.|.+ |.++.|+. +..+ +... .++..++ ..+.
T Consensus 133 -~iEi~vLqki~~~DP~-g~~rcv~m~~wFdyrghiCivfell-G~S~~dFl--k~N~y~~fpi~~ir~m~~QL~-~sv~ 206 (415)
T KOG0671|consen 133 -LIEIEVLQKINESDPN-GKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFL--KENNYIPFPIDHIRHMGYQLL-ESVA 206 (415)
T ss_pred -HHHHHHHHHHHhcCCC-CceEEEeeehhhhccCceEEEEecc-ChhHHHHh--ccCCccccchHHHHHHHHHHH-HHHH
Confidence 1233334444332111 11222 222447888889999987 55666653 2222 2222 2223333 2366
Q ss_pred HHHhCCCccCCCCCCceEEecc------------------CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004115 456 QILSHGFFHADPHPGNIAVDDV------------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 517 (773)
Q Consensus 456 qI~~~GffHaDpHPGNILV~~~------------------~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~ 517 (773)
.+|..+++|.|+||.||++... +.-.|+++|||.+....+... .++.--...+-
T Consensus 207 fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs--------~iVsTRHYRAP 278 (415)
T KOG0671|consen 207 FLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHS--------TIVSTRHYRAP 278 (415)
T ss_pred HHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcc--------eeeeccccCCc
Confidence 7899999999999999998531 122589999999987665441 22222223455
Q ss_pred HHHHHcCCCCCCCChHHHHHHH
Q 004115 518 QAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 518 ~~l~~lG~~~~~~D~~~l~~~i 539 (773)
+.++.+|.-.| .|++++.-.+
T Consensus 279 EViLgLGwS~p-CDvWSiGCIL 299 (415)
T KOG0671|consen 279 EVILGLGWSQP-CDVWSIGCIL 299 (415)
T ss_pred hheeccCcCCc-cCceeeeeEE
Confidence 67788898654 5888877543
No 452
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.96 E-value=6.1e-05 Score=80.76 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=28.1
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccC
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
..+++|+|+||+|+++++ ++.+.++||+.++.=+
T Consensus 174 ~~~l~HgD~~~~Nil~~~--~~~~~iIDfe~a~~g~ 207 (296)
T cd05153 174 PRGVIHADLFRDNVLFDG--DELSGVIDFYFACTDA 207 (296)
T ss_pred CCcCCccCcCcccEEEeC--CceEEEeehhhhcCch
Confidence 368999999999999984 5556899999888643
No 453
>PRK09902 hypothetical protein; Provisional
Probab=97.91 E-value=0.00024 Score=73.58 Aligned_cols=150 Identities=17% Similarity=0.101 Sum_probs=98.8
Q ss_pred hccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004115 301 ERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 380 (773)
Q Consensus 301 ~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 380 (773)
+.+|+---+-|+.+.|++-.+.|+.+-+|-|.-.+.... ..|. -
T Consensus 19 ~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~----------------r~P~--------------------g 62 (216)
T PRK09902 19 DWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSV----------------RYPF--------------------G 62 (216)
T ss_pred ceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccc----------------cCCC--------------------C
Confidence 345554567799999999998888999998843332220 0021 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeecc------CCCeEEEEeecCCC-Chhhhhhhhhc---CCCHHHHHHHHH
Q 004115 381 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEY------TTPQILTMEYVPGI-KINRIQSLDEL---GVDRKRLGRYAV 450 (773)
Q Consensus 381 ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~------st~~vLVMEyieG~-~L~d~~~l~~~---~~d~~~la~~li 450 (773)
+--|.+|-.++.++.+. +|.+|+++..- .-+.+||+|-++|. +|.++...... +...++..-..+
T Consensus 63 ~ptf~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~v 137 (216)
T PRK09902 63 RPTIVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAV 137 (216)
T ss_pred chHHHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHH
Confidence 23577788888888763 46677777321 12369999999874 66665322111 111222233335
Q ss_pred HHHHHHHHhCCCccCCCCCCceEEeccCCCc--EEEEeecceecc
Q 004115 451 ESYLEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGSI 493 (773)
Q Consensus 451 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~--I~LlDFGlv~~L 493 (773)
...+.++|..|+.|+||-|-||+++. +|+ +.||||--++..
T Consensus 138 a~~ia~LH~~Gv~Hgdly~khIll~~--~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 138 ALAFKKMHSVNRQHGCCYVRHIYVKT--EGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHCCCcCCCCCHhheeecC--CCCeeEEEEEhhccchh
Confidence 56689999999999999999999975 445 999998766543
No 454
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.83 E-value=0.00011 Score=79.71 Aligned_cols=94 Identities=22% Similarity=0.368 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004115 281 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 360 (773)
Q Consensus 281 ~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~ 360 (773)
|..+.+.|.+.+|.+.. --+.+|++.|++.++|+...+++.+.||+.......
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~----------------------- 54 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRD----------------------- 54 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCC-----------------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEECCCccEEEEecChhhHH-----------------------
Confidence 45678889999986521 113479999999999999888999999998522111
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCC
Q 004115 361 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGI 427 (773)
Q Consensus 361 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~ 427 (773)
-|..|+..++.+++. ..+.+|+|+. ++.+..+|+|||++..
T Consensus 55 ----------------------~f~~Ea~gL~~L~~~----~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 55 ----------------------MFEGEAEGLKALAEA----NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ----------------------HHHHHHHHHHHHCHT----TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ----------------------HHHHHHHHHHHHHhc----CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 267788888887552 4578999986 3445679999999977
No 455
>PRK06148 hypothetical protein; Provisional
Probab=97.83 E-value=0.00052 Score=86.22 Aligned_cols=55 Identities=18% Similarity=0.427 Sum_probs=43.8
Q ss_pred hhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEecCC
Q 004115 272 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPG 334 (773)
Q Consensus 272 Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~ 334 (773)
+....|+++.+++.+++++.+|..- +.+||++ ..-++|+.+. +|+.+++|+.+|.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 4456788999999999999999642 2357865 5688999988 6889999999875
No 456
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.77 E-value=0.00027 Score=73.08 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=29.1
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
.++.|+|+||+||++++ +++.+.++||-.++.-++
T Consensus 170 ~~l~H~Dl~~~Nil~~~-~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNE-EKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeC-CCCCEEEEEcccCCcCch
Confidence 36999999999999984 247899999998886554
No 457
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.74 E-value=0.00015 Score=78.38 Aligned_cols=42 Identities=24% Similarity=0.437 Sum_probs=32.1
Q ss_pred HHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhh
Q 004115 454 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 497 (773)
Q Consensus 454 l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~ 497 (773)
...+|..|++|+|++|.|++++. +|.+.|-||+.+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~--~G~v~Lg~F~~~~r~g~~~ 199 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQ--DGGVFLGDFSSLVRAGTRY 199 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-T--TS-EEE--GGGEEETTEEE
T ss_pred HHHHhhcceEecccceeeEEEcC--CCCEEEcChHHHeecCcee
Confidence 55678999999999999999986 8999999999988876543
No 458
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.73 E-value=5e-05 Score=82.47 Aligned_cols=162 Identities=22% Similarity=0.315 Sum_probs=107.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
+.||-|--+-||.+.. .|++.++|+-|-|-. -.+.++.=-.++.+... ..|.-+ .-+.-
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRt-----SFR~Vk~kRDY~r~r~~------~sWlyL---------SRlaa 157 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRT-----SFRNVKNKRDYLRKRKS------GSWLYL---------SRLAA 157 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhh-----hHHHhhhhhhhHhcCCc------cchhhh---------HHHHH
Confidence 3588888999999999 799999998765432 12222222222222111 113211 11222
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCCcc
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFH 464 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~~GffH 464 (773)
.+|-.-|..+.+ .++.||+++. +++.+.|||+++|.++.++... .++..+...++.. +.-+-.+|++|
T Consensus 158 ~kEfafmkaL~e-----~gfpVPkpiD--~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~-Iv~la~~GlIH 225 (465)
T KOG2268|consen 158 TKEFAFMKALYE-----RGFPVPKPID--HNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGL-IVRLANHGLIH 225 (465)
T ss_pred HHHHHHHHHHHH-----cCCCCCCccc--ccceeeHHHhhcccceeeeeec----CChHHHHHHHHHH-HHHHHHcCcee
Confidence 344444555544 4578999995 6789999999999999876533 2455555555543 44456899999
Q ss_pred CCCCCCceEEeccCCCcEEEEeecceeccChhhHHHH
Q 004115 465 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL 501 (773)
Q Consensus 465 aDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l 501 (773)
+|-.-=||+|.+ ++++++|||-.+-+.+.+.-+.|
T Consensus 226 gDFNEFNimv~d--d~~i~vIDFPQmvS~sh~nA~~Y 260 (465)
T KOG2268|consen 226 GDFNEFNIMVKD--DDKIVVIDFPQMVSTSHPNAEYY 260 (465)
T ss_pred cccchheeEEec--CCCEEEeechHhhccCCCcccee
Confidence 999999999986 88999999998888876654433
No 459
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.69 E-value=0.0004 Score=75.30 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=28.3
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccC
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
..+++|+|+|++|+++++ ++...++||+.+..=.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~--~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDG--DSVKGVIDFYFACTDA 219 (307)
T ss_pred CCccCCCCCCcCcEEEEC--CceEEEeecccccCcc
Confidence 378999999999999985 5556899999987543
No 460
>PLN02876 acyl-CoA dehydrogenase
Probab=97.68 E-value=0.00044 Score=85.16 Aligned_cols=106 Identities=15% Similarity=0.201 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeec-C---eeEEEEEecCCccchHHHHHHHHHHHHHHHh
Q 004115 279 FPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQ 354 (773)
Q Consensus 279 ~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~-G---~~VAVKVqrP~i~~~i~~DL~il~~la~~l~ 354 (773)
++.+.+.+.+.+.++. +..-...+..++++.|....+|+-+.. | ..+++|...|+....
T Consensus 18 ~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~---------------- 80 (822)
T PLN02876 18 FDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ---------------- 80 (822)
T ss_pred CCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc----------------
Confidence 5556666666655431 111111245678999999999998873 2 478888764442100
Q ss_pred hcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC-----CCeEEEEeecCCCCh
Q 004115 355 KIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT-----TPQILTMEYVPGIKI 429 (773)
Q Consensus 355 ~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s-----t~~vLVMEyieG~~L 429 (773)
..-++.+|++.+..+.. ...+.+|++|.... +..++||||++|..+
T Consensus 81 -------------------------~~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 81 -------------------------SAHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred -------------------------cHHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 01145677777776643 24588999997433 346899999999864
Q ss_pred h
Q 004115 430 N 430 (773)
Q Consensus 430 ~ 430 (773)
.
T Consensus 132 ~ 132 (822)
T PLN02876 132 V 132 (822)
T ss_pred C
Confidence 3
No 461
>PRK06149 hypothetical protein; Provisional
Probab=97.61 E-value=0.00065 Score=85.12 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=43.5
Q ss_pred HHhhhhCCCCCCHHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCc
Q 004115 269 LSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGL 335 (773)
Q Consensus 269 Ls~Lqd~vpp~p~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i 335 (773)
+..+....|.++.+++.+++++.+|.. . +..++++..- ++|+.+.++..+++|+.+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~------~~~~L~s~~d-~nf~v~t~~~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-G------TLTELGSQQD-RNFRVDSDGGRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-e------EEEecCCcCc-ceEEEEecCCcEEEEeCCccC
Confidence 345667789999999999999999864 1 1256765554 789888755678889987753
No 462
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.49 E-value=0.00058 Score=77.22 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=77.1
Q ss_pred Chhhhhh---ccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004115 295 PLDDVFE---RFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 369 (773)
Q Consensus 295 ~~~eiF~---~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~ 369 (773)
.++++|. +.-...+|=|-|+.|+.|.+ ..+.||+||++-.-
T Consensus 70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---------------------------------- 115 (590)
T KOG1290|consen 70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---------------------------------- 115 (590)
T ss_pred eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----------------------------------
Confidence 3566775 33457899999999999999 57899999995321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC------CCeEEEEeecCCCChhhhhh-hhhcCCCH
Q 004115 370 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT------TPQILTMEYVPGIKINRIQS-LDELGVDR 442 (773)
Q Consensus 370 i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s------t~~vLVMEyieG~~L~d~~~-l~~~~~d~ 442 (773)
.+.+....|+.+....+... -.+...=.|-+.+..+. ...++|.|++ |-.|-.+.. ..-.|+..
T Consensus 116 ---hYtEaAlDEIklL~~v~~~D-----p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl 186 (590)
T KOG1290|consen 116 ---HYTEAALDEIKLLQQVREGD-----PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPL 186 (590)
T ss_pred ---HHHHHHHHHHHHHHHHHhcC-----CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcH
Confidence 12222233333333222111 00011112233333221 2358888887 555555432 22223332
Q ss_pred H---HHHHHHHHHHHHHHH-hCCCccCCCCCCceEEec
Q 004115 443 K---RLGRYAVESYLEQIL-SHGFFHADPHPGNIAVDD 476 (773)
Q Consensus 443 ~---~la~~li~~~l~qI~-~~GffHaDpHPGNILV~~ 476 (773)
. +|++. +-..|..+| +.|++|.|+||.|||+.-
T Consensus 187 ~~VK~I~~q-vL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 187 SCVKEICRQ-VLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHH-HHHHHHHHHHhcCccccCCCcceeeeec
Confidence 2 33332 223366777 689999999999999863
No 463
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.45 E-value=0.0014 Score=72.98 Aligned_cols=82 Identities=20% Similarity=0.129 Sum_probs=51.6
Q ss_pred ccccceeEEEEEeec-C-eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004115 308 IAAASLGQVHRARLK-G-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 385 (773)
Q Consensus 308 IgsaSiGQVhrA~l~-G-~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 385 (773)
||-|...-||++... | +.|+||--.|-++.. +.. .+.+.. .-.
T Consensus 3 igdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~-------------------g~~--wpl~~~--------------R~~ 47 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVV-------------------GES--WPLTLD--------------RAR 47 (370)
T ss_pred CCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhc-------------------CCC--CCCCcc--------------HHH
Confidence 688999999999983 3 689999765544311 000 011111 113
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCC
Q 004115 386 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIK 428 (773)
Q Consensus 386 ~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~ 428 (773)
.|+..+....+.. | =.+|++|.-.....++|||+++...
T Consensus 48 ~E~~~L~~~~~~~---P-~~vP~vy~~D~e~~~~vMEdL~~~~ 86 (370)
T TIGR01767 48 IESSALIRQGEHV---P-HLVPRIFHFDTEMAVTVMEDLSHHK 86 (370)
T ss_pred HHHHHHHHhhccC---c-cccCeEEEEccccceehHhhCccch
Confidence 4555555544422 2 2699999877777899999996544
No 464
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.31 E-value=0.0012 Score=71.23 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=29.8
Q ss_pred CCCccCCCCCCceEEeccC---CCcEEEEeecceeccChh
Q 004115 460 HGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~---~g~I~LlDFGlv~~Ls~~ 496 (773)
.++.|+|+||+||++++ + ++.+.+|||..++.-++-
T Consensus 179 ~~lcH~Dl~~~Nil~~~-~~~~~~~i~lIDwEya~~~~p~ 217 (302)
T cd05156 179 VVFCHNDLQEGNILLLN-PSSETKKLVLIDFEYASYNYRG 217 (302)
T ss_pred ceEEecCCCcCeEEecC-CCCCCCcEEEEeeCCCCCCCcH
Confidence 46899999999999974 1 278999999999976653
No 465
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.15 E-value=0.012 Score=63.38 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=28.8
Q ss_pred CCCccCCCCCCceEEeccCCCc-EEEEeecceeccChh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGR-LIFYDFGMMGSISPN 496 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~-I~LlDFGlv~~Ls~~ 496 (773)
..++|+|+||+||++++ +++ ..++||++++.=++.
T Consensus 185 ~~lvHGD~~~~Nilv~~--~~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDE--DARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeC--CCCEEEEECcHhcccCCHH
Confidence 35899999999999984 366 469999999977664
No 466
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.05 E-value=0.0047 Score=68.35 Aligned_cols=29 Identities=38% Similarity=0.567 Sum_probs=25.1
Q ss_pred CccCCCCCCceEEeccCCC-cEEEEeecceec
Q 004115 462 FFHADPHPGNIAVDDVNGG-RLIFYDFGMMGS 492 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g-~I~LlDFGlv~~ 492 (773)
++|+|+||+||++++ +. -+.++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~--~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDD--DTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcC--CCCeeeEEEcccccc
Confidence 899999999999985 44 389999998875
No 467
>PLN02236 choline kinase
Probab=97.04 E-value=0.0088 Score=66.44 Aligned_cols=159 Identities=22% Similarity=0.339 Sum_probs=92.6
Q ss_pred HHHHHHHHhCCChhhhh--hccCcccccccceeEEEEEee-c-----CeeEEEEEecCCccchHHHHHHHHHHHHHHHhh
Q 004115 284 AVSIVEEELGAPLDDVF--ERFDVEPIAAASLGQVHRARL-K-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQK 355 (773)
Q Consensus 284 v~~iie~elG~~~~eiF--~~fd~~PIgsaSiGQVhrA~l-~-----G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~ 355 (773)
+.+++.+ ++..|.++. +.++.+|+..|---++|+... . ++.|++|+-.++....
T Consensus 19 ~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~----------------- 80 (344)
T PLN02236 19 LKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELF----------------- 80 (344)
T ss_pred HHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCee-----------------
Confidence 4455553 555676542 345668888888899999876 2 3689999876553221
Q ss_pred cCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhh--
Q 004115 356 IDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQ-- 433 (773)
Q Consensus 356 ~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~-- 433 (773)
+|-.+|.+++..+.+. ++ -|+++..... -.++||++|.+++.-.
T Consensus 81 --------------------------idR~~E~~~~~~l~~~-----gl-~P~~~~~~~~--g~v~efi~g~~l~~~~l~ 126 (344)
T PLN02236 81 --------------------------FDRDDEIRTFECMSRH-----GQ-GPRLLGRFPN--GRVEEFIHARTLSAADLR 126 (344)
T ss_pred --------------------------echHHHHHHHHHHHHc-----CC-CCceEEEECC--ceEEEeeCCCCCCHHHcC
Confidence 1234566666655542 23 5777755433 3689999998875310
Q ss_pred ------h-------hhhcC------CCH-HHHHHH-------------------HHHHH---HHHHH-----hCCCccCC
Q 004115 434 ------S-------LDELG------VDR-KRLGRY-------------------AVESY---LEQIL-----SHGFFHAD 466 (773)
Q Consensus 434 ------~-------l~~~~------~d~-~~la~~-------------------li~~~---l~qI~-----~~GffHaD 466 (773)
. +.... .+. .++... .+... ++..+ ...+.|+|
T Consensus 127 ~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~D 206 (344)
T PLN02236 127 DPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHND 206 (344)
T ss_pred ChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCC
Confidence 0 00100 010 111000 00000 11111 23689999
Q ss_pred CCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 467 PHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 467 pHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
+||+||++++ .++.+.+|||..++.-++
T Consensus 207 l~~~Nil~~~-~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 207 LQYGNIMIDE-ETRAITIIDYEYASYNPV 234 (344)
T ss_pred CCcCcEEEeC-CCCcEEEEeehhccccch
Confidence 9999999974 346899999999997655
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.90 E-value=0.018 Score=59.36 Aligned_cols=150 Identities=23% Similarity=0.341 Sum_probs=89.3
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004115 305 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 384 (773)
Q Consensus 305 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 384 (773)
..|||+|+-=-||.-- +.....|||.+|+....- .....++.++.|.. -.+...+|+++
T Consensus 6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~-------~~~~~~~k~~~~~~-------------~~~~~~~E~~~ 64 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERR-------RPFKRWLKRLRPKS-------------RYRQNRRELRY 64 (199)
T ss_pred CcccccCCCceEEECC-CCCCeEEEEEcccccccc-------ccchhHHHhhcccc-------------hhHHHHHHHHH
Confidence 4789999875555322 456789999999872211 01112222222210 01223334443
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecC---C---CChhhhhhhhhcCCCHHHHHHHHHHHHHHH
Q 004115 385 TQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVP---G---IKINRIQSLDELGVDRKRLGRYAVESYLEQ 456 (773)
Q Consensus 385 ~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~--~vLVMEyie---G---~~L~d~~~l~~~~~d~~~la~~li~~~l~q 456 (773)
-..+.. -.+.....+|+.|....|. .-+|+|.+. | .+|.++. ...+++. -...++..+.+.
T Consensus 65 ------y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l--~~~~~~~--~~~~~L~~f~~~ 133 (199)
T PF10707_consen 65 ------YKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL--KEGGLTE--ELRQALDEFKRY 133 (199)
T ss_pred ------HHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH--HcCCccH--HHHHHHHHHHHH
Confidence 333332 2344567788888754443 478888864 2 2444443 2333443 445667888899
Q ss_pred HHhCCCccCCCCCCceEEeccCCC--cEEEEe
Q 004115 457 ILSHGFFHADPHPGNIAVDDVNGG--RLIFYD 486 (773)
Q Consensus 457 I~~~GffHaDpHPGNILV~~~~~g--~I~LlD 486 (773)
++.++++..|++|+||++....++ +++++|
T Consensus 134 l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 134 LLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 999999999999999999764444 599999
No 469
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.80 E-value=0.0048 Score=67.85 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=30.6
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
..++|+|.|+||+++++ ++.+.++||++++.=+|.
T Consensus 198 ~~lvHGD~~~gNlii~~--~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDP--GRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeC--CCeeEEEeccccccCCcH
Confidence 46899999999999986 666999999999987764
No 470
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.80 E-value=0.01 Score=65.28 Aligned_cols=31 Identities=29% Similarity=0.228 Sum_probs=26.0
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
..|++|+|+|||||++. + .+.++||+.++.=
T Consensus 195 ~~~liHgD~h~~NvL~~---d-~~~iIDFDd~~~g 225 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR---D-GPHFVDLDDARMG 225 (325)
T ss_pred CccceecCCCchhcccc---C-CcEEEeCCCCCCC
Confidence 35799999999999994 4 5789999999853
No 471
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=96.66 E-value=0.0051 Score=60.09 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=65.5
Q ss_pred ChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHH
Q 004115 428 KINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAF 505 (773)
Q Consensus 428 ~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~ 505 (773)
+|.++......+++...+...+.+ ..+..+|.+| ||.||+++. ++.+++ ||++...+....
T Consensus 2 sL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~~------- 64 (176)
T smart00750 2 SLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQS------- 64 (176)
T ss_pred cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeeccccC-------
Confidence 455554332333555554443333 3366777777 999999975 777887 999987765321
Q ss_pred HHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 004115 506 YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 506 ~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
.+++.+++++++..+...+..|++++...+++++.
T Consensus 65 ----~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 99 (176)
T smart00750 65 ----RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALD 99 (176)
T ss_pred ----CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHh
Confidence 35677888888877777778899999988877653
No 472
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.48 E-value=0.0033 Score=73.19 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=84.4
Q ss_pred CCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccC
Q 004115 401 MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVN 478 (773)
Q Consensus 401 ~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~ 478 (773)
++.+.-+....+..++.+++++|+.|+.+-.-.... ...+....+...++ ..+.+.|..|++|+|+||.||+++.
T Consensus 56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~-- 132 (612)
T KOG0603|consen 56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL-- 132 (612)
T ss_pred CCceeeeeeeeccccchhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--
Confidence 444555555556678889999999998765422111 11222222223333 3367788999999999999999986
Q ss_pred CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 004115 479 GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 539 (773)
Q Consensus 479 ~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i 539 (773)
+|.+++.|||..+..-+.... .+++++++++... |- ....|-+.+....
T Consensus 133 ~Ghi~~tdfglske~v~~~~~----------cgt~eymApEI~~-gh-~~a~D~ws~gvl~ 181 (612)
T KOG0603|consen 133 EGHIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-GH-LSAADWWSFGVLA 181 (612)
T ss_pred cCccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-cc-CCcccchhhhhhH
Confidence 899999999988876554432 6789999999888 32 3456666655443
No 473
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.44 E-value=0.00072 Score=82.61 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeeccee
Q 004115 450 VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 491 (773)
Q Consensus 450 i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~ 491 (773)
+-..+.|+|..|+.|+|+|..||||+. -+=+.|.||..-+
T Consensus 129 LL~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 129 LLKALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHHHcCccccccccceEEEee--echhhhhcccccC
Confidence 334589999999999999999999985 5667888887665
No 474
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.41 E-value=0.046 Score=57.52 Aligned_cols=96 Identities=22% Similarity=0.329 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004115 281 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 360 (773)
Q Consensus 281 ~~~v~~iie~elG~~~~eiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~DL~il~~la~~l~~~~p~~ 360 (773)
|..+.+.+-+.+|.. ++ -+.+++.-|.+-+.|+-.....++-||+....
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~dg~~~~FvK~n~~~-------------------------- 50 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRDGTDPFFVKCNQRE-------------------------- 50 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeecCCcceEEEecchh--------------------------
Confidence 556777788888865 22 23467888877777777767789999986210
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChh
Q 004115 361 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKIN 430 (773)
Q Consensus 361 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~ 430 (773)
.+--|..||.+++.+++. ..|.||+||..-+ +..||||||++-.+++
T Consensus 51 -------------------~~~~f~AEa~gL~~la~s----~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 51 -------------------QLSMFTAEADGLELLARS----NTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred -------------------hHHHHHHHHHHHHHHHhc----CCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 122477888888888763 4589999997544 4569999999987776
No 475
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.40 E-value=0.025 Score=62.44 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=29.0
Q ss_pred CccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 462 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
+-|.|++|+||++.+ .++++.+|||..++.=++-
T Consensus 184 ~CHnDl~~~NiL~~~-~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 184 FAHNDLLSGNLMLNE-DEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred EEECCCCcccEEEeC-CCCcEEEEcccccCCCccH
Confidence 789999999999974 3578999999999976653
No 476
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.39 E-value=0.005 Score=68.46 Aligned_cols=73 Identities=21% Similarity=0.257 Sum_probs=46.6
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHhCCCccCCCCCCceEEeccCC--CcEEEEeecce
Q 004115 416 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILSHGFFHADPHPGNIAVDDVNG--GRLIFYDFGMM 490 (773)
Q Consensus 416 ~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~---~~l~qI~~~GffHaDpHPGNILV~~~~~--g~I~LlDFGlv 490 (773)
..||||-..+- +|..+.-.... + .+.+..++. ....+++.||+-|||+|.+||++.-.+| ..+++.|||++
T Consensus 317 tlylvMkrY~~-tLr~yl~~~~~--s-~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc 392 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLWTRHR--S-YRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC 392 (598)
T ss_pred eEEEehhcchh-hHHHHHhcCCC--c-hHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence 35899987653 45554322211 1 122222222 2256789999999999999999964334 37999999988
Q ss_pred ec
Q 004115 491 GS 492 (773)
Q Consensus 491 ~~ 492 (773)
--
T Consensus 393 LA 394 (598)
T KOG4158|consen 393 LA 394 (598)
T ss_pred ee
Confidence 53
No 477
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.31 E-value=0.0042 Score=73.94 Aligned_cols=70 Identities=23% Similarity=0.334 Sum_probs=48.4
Q ss_pred EeecCCCChhhhhhhh-hcC-CCHHHHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccC
Q 004115 421 MEYVPGIKINRIQSLD-ELG-VDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 421 MEyieG~~L~d~~~l~-~~~-~d~~~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
||||++ .|..+.... ... .+...... .+...++.+|..|+-|+|+||.|+++.. +|.++++|||......
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fK-qL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFK-QLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHH-HHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcceeec
Confidence 999999 777754322 111 11112111 1222357788999999999999999986 7899999999877553
No 478
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=96.16 E-value=0.0016 Score=74.42 Aligned_cols=123 Identities=17% Similarity=0.145 Sum_probs=76.2
Q ss_pred eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh----CCCccCCCCCCceEEeccCCCcEEEEeecceec
Q 004115 417 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS----HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 492 (773)
Q Consensus 417 ~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~qI~~----~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~ 492 (773)
.++.|++|+-.+|.|+..-+..+..+.. .++....+|+-. .|++|+|++|.||+... +.++++.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~---s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~--d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSL---SLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSD--DDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccch---hHHHHHHHhhccchhhccchhhhcccccccccc--chhhhhhhhhheee
Confidence 5899999999999998753433322221 122223344332 89999999999999875 77999999999998
Q ss_pred cChhh--HHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHH
Q 004115 493 ISPNI--REGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 546 (773)
Q Consensus 493 Ls~~~--r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 546 (773)
.+... ....++.... .+..-++.++-+.-.-.....|.++|+-.+.+++..|
T Consensus 406 ~~~~~~~~~~~a~~t~~--~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f 459 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQ--VGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQF 459 (516)
T ss_pred cccCCcccchhhhhhhc--ccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHh
Confidence 76544 1111111111 1222233333332222345678999988887777654
No 479
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.16 E-value=0.046 Score=60.02 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=84.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC--CH
Q 004115 365 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DR 442 (773)
Q Consensus 365 ~d~~~i~~E~~~~l~~ElDf~~EA~Nl~rf~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~--d~ 442 (773)
.++..|+.-++ ..|..|+.++++ .++.+|.|+. -.+.||||.|+.---+.. ..++...+ +.
T Consensus 322 ~NpR~i~~mWA---------EkEmhNL~RMq~-----~GlpcP~vV~--lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E 384 (531)
T KOG2269|consen 322 QNPRGILKMWA---------EKEMHNLSRMQK-----HGLPCPQVVK--LKKHVLVMSFIGDQGLAA-PKLKNVELTDDE 384 (531)
T ss_pred cCcHHHHHHHH---------HHHHHHHHHHHh-----cCCCCCceee--eecceEEEEeecCCCCCC-ccccccccChHH
Confidence 35555555443 357789999876 3577888873 567899999985322111 01111111 12
Q ss_pred HHHHHHHHHHHHH-HHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004115 443 KRLGRYAVESYLE-QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 521 (773)
Q Consensus 443 ~~la~~li~~~l~-qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~ 521 (773)
.+-+...+.+.+. +.+++-++|+|+.--|+|.. .|++.+||-..+-..+... .+ -++.+|...++..+.
T Consensus 385 ~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~---~gKvw~IDVsQsvep~HP~--~L-----eFL~RDc~Ni~~FF~ 454 (531)
T KOG2269|consen 385 RRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWT---PGKVWVIDVSQSVEPSHPR--SL-----EFLTRDCQNIITFFT 454 (531)
T ss_pred HHHHHHHHHHHHHHHHHhhheeecchhhhhheec---CCceEEEechhccCCCCcc--hh-----HHHHHHHHHHHHHHH
Confidence 2223333444444 44578899999999999997 5799999977665554332 22 234578888888888
Q ss_pred HcCCC
Q 004115 522 QMGVL 526 (773)
Q Consensus 522 ~lG~~ 526 (773)
..|..
T Consensus 455 r~G~p 459 (531)
T KOG2269|consen 455 RIGTP 459 (531)
T ss_pred hcCCC
Confidence 88763
No 480
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=94.82 E-value=0.02 Score=70.41 Aligned_cols=91 Identities=20% Similarity=0.169 Sum_probs=62.1
Q ss_pred HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecceeccChh----hHHHHHHHHH-----HHhhcCHHHHHHHHHH
Q 004115 452 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN----IREGLLEAFY-----GIYEKDADKVLQAMVQ 522 (773)
Q Consensus 452 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~----~r~~l~~l~~-----al~~~D~~~i~~~l~~ 522 (773)
..++.+|..|++|+|++|.|++|+. -|.+++.|||+.+..-.. ..+..++-+. .=+.+.+++++++++.
T Consensus 154 la~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 154 LAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred HHhHhhccCCeecCCCCCCcceeee--cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 3478899999999999999999986 799999999987754221 1222211111 1123456777777776
Q ss_pred cCCCCCCCChHHHHHHHHHHHH
Q 004115 523 MGVLVPTGDTTAVRRTAQFFLN 544 (773)
Q Consensus 523 lG~~~~~~D~~~l~~~i~~~l~ 544 (773)
+--....+|-+++.-..++|+-
T Consensus 232 rqgygkpvdwwamGiIlyeFLV 253 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLV 253 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHhe
Confidence 6444566788888877776653
No 481
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.72 E-value=0.024 Score=57.88 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=28.1
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccChh
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 496 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~~ 496 (773)
-..|+|+||+||++++ +.+++|||+.++.-++.
T Consensus 78 ~p~H~D~~~~N~~~~~---~~~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 78 APLHMDVHAGNLVHSA---SGLRLIDWEYAGDGDIA 110 (188)
T ss_pred eeecCCCCCccEEEEC---CCEEEEeCCcccCCCHH
Confidence 4689999999999874 44999999999988774
No 482
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=94.68 E-value=0.26 Score=51.10 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=75.9
Q ss_pred ccccccce-eEEEEEeecCeeEEEEEe---cCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004115 306 EPIAAASL-GQVHRARLKGEEVVVKVQ---RPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 381 (773)
Q Consensus 306 ~PIgsaSi-GQVhrA~l~G~~VAVKVq---rP~i~~~i~~DL~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 381 (773)
+=+|.|+- |.|+++..+|+.+|+|+- .+.-.+....++ .. .+. ++...-..=
T Consensus 43 efLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~-----------------~~--~~~-----~~~~~~~y~ 98 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERF-----------------AG--HET-----SLSTPAHYA 98 (207)
T ss_pred eecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccc-----------------cc--ccc-----ccchhhhhc
Confidence 56999999 999999999999999991 111111000000 00 000 000000001
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-cccc------ce-----------eeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHH
Q 004115 382 IDYTQEAANAELFASNFKDMD-YVKV------PT-----------IFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK 443 (773)
Q Consensus 382 lDf~~EA~Nl~rf~~~f~~~~-~V~v------P~-----------v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~ 443 (773)
..|..|++.-.++++.-...- .|.+ .. .........-+|.||++...-. ...
T Consensus 99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~----------~~~ 168 (207)
T PF13095_consen 99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPL----------QIR 168 (207)
T ss_pred ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcccc----------chh
Confidence 167777777777766543221 1111 10 0000112346788888765511 111
Q ss_pred HHHHHHHHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeecce
Q 004115 444 RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 490 (773)
Q Consensus 444 ~la~~li~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv 490 (773)
.+.+ +..=++.+|..|++-+|+++.|.. +| +|+|||.+
T Consensus 169 ~~~~--~~~dl~~~~k~gI~~~Dv~~~ny~-----~G--~lvDfs~~ 206 (207)
T PF13095_consen 169 DIPQ--MLRDLKILHKLGIVPRDVKPRNYR-----GG--KLVDFSSS 206 (207)
T ss_pred HHHH--HHHHHHHHHHCCeeeccCcccccc-----CC--EEEecccC
Confidence 1111 222356788999999999999986 34 68899864
No 483
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=94.62 E-value=0.083 Score=56.42 Aligned_cols=30 Identities=30% Similarity=0.324 Sum_probs=26.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCc
Q 004115 306 EPIAAASLGQVHRARL-KGEEVVVKVQRPGL 335 (773)
Q Consensus 306 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i 335 (773)
.++..|+.+.|+.++. +|+++++|+..|+-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999998 89999999997754
No 484
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.78 E-value=0.15 Score=57.04 Aligned_cols=81 Identities=22% Similarity=0.250 Sum_probs=47.6
Q ss_pred Cccccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHH--HHH--hCCCccCCCCCCceEEec
Q 004115 402 DYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLE--QIL--SHGFFHADPHPGNIAVDD 476 (773)
Q Consensus 402 ~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~~~l~--qI~--~~GffHaDpHPGNILV~~ 476 (773)
+..--|.+|. .-+--.|++|++- |.+|.-+.. ++..-+...+..+.. .+. ..-|=|+|+|-+||+|+
T Consensus 285 ~~~e~~~vv~~de~~y~yl~~kdh-gt~is~ik~------~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId- 356 (488)
T COG5072 285 VFLETLKVVSLDETLYLYLHFKDH-GTPISIIKA------DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID- 356 (488)
T ss_pred hhhhcceEEecCCceEEEEEEecC-Cceeeeeec------ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-
Confidence 3445566666 2222346677664 666654321 111111222222222 222 34588999999999997
Q ss_pred cCCCcEEEEeecceec
Q 004115 477 VNGGRLIFYDFGMMGS 492 (773)
Q Consensus 477 ~~~g~I~LlDFGlv~~ 492 (773)
.|+|.||||-+++-
T Consensus 357 --~GnvtLIDfklsRl 370 (488)
T COG5072 357 --EGNVTLIDFKLSRL 370 (488)
T ss_pred --cCceEEEEeeeeec
Confidence 69999999999983
No 485
>PTZ00384 choline kinase; Provisional
Probab=92.07 E-value=1.8 Score=49.07 Aligned_cols=33 Identities=27% Similarity=0.193 Sum_probs=27.0
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
..|-|-|+++|||+.. ++.+.+|||-.++.=++
T Consensus 227 ~VfCHNDL~~gNIL~~---~~~l~lID~EYA~~n~~ 259 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF---NQGIYFIDFDFAGFNYV 259 (383)
T ss_pred eeeeeccCCcccEEec---CCCEEEEEeccccCCch
Confidence 5789999999999875 56799999988775433
No 486
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=91.74 E-value=0.29 Score=54.86 Aligned_cols=123 Identities=13% Similarity=0.062 Sum_probs=73.2
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhc-------CCCHHHHHHHH--HHHHHHHHHhCCCccCCCCCCceEEeccCCCcEEE
Q 004115 414 TTPQILTMEYVPGIKINRIQSLDEL-------GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIF 484 (773)
Q Consensus 414 st~~vLVMEyieG~~L~d~~~l~~~-------~~d~~~la~~l--i~~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~L 484 (773)
........-+..-+.|..+....+. .....++.... +...+.++|.+|++|-|+-.-|-.|++ .-++++
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd--~LqVkl 437 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD--QLQVKL 437 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh--heeEEe
Confidence 3334445566655566665442221 11222333322 445578899999999999999999986 678999
Q ss_pred EeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 004115 485 YDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 542 (773)
Q Consensus 485 lDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~~i~~~ 542 (773)
.|=.+.+.+=|.+-..+.+- -++-...|..+.+.-.......|.++|...+-++
T Consensus 438 tDsaLSRDLFP~DYhcLGDn----EnRPvkWMslEal~n~~yssasDvWsfGVllWEL 491 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDN----ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL 491 (563)
T ss_pred ccchhccccCcccccccCCC----CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence 99998888755544332110 0122233443334444446677899888765444
No 487
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=91.65 E-value=0.12 Score=55.68 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=26.9
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceecc
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 493 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~L 493 (773)
..|++|+|+|++||++++ +.+.++||+.+..=
T Consensus 186 ~~~liHgD~~~~Nil~~~---~~i~lIDfd~~~~~ 217 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD---NEVYVIDFDYCTID 217 (313)
T ss_pred cCceEcCCCCcccEEEeC---CcEEEEECcccccC
Confidence 468999999999999973 67999999977643
No 488
>PTZ00296 choline kinase; Provisional
Probab=91.43 E-value=2.5 Score=48.91 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=26.5
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
.+-|.|+.++||+.. ++.+.||||-.++.=++
T Consensus 285 VfCHNDl~~~NiL~~---~~~l~LIDfEYAg~ndp 316 (442)
T PTZ00296 285 VFCHNDLQENNIINT---NKCLRLIDFEYSGYNFL 316 (442)
T ss_pred eEEeCCCCccceeec---CCCEEEEeecccccccH
Confidence 578999999999875 45699999998886544
No 489
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=91.33 E-value=5.2 Score=45.90 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=25.3
Q ss_pred CccCCCCCCceEEeccCCCc---EEEEeecceeccCh
Q 004115 462 FFHADPHPGNIAVDDVNGGR---LIFYDFGMMGSISP 495 (773)
Q Consensus 462 ffHaDpHPGNILV~~~~~g~---I~LlDFGlv~~Ls~ 495 (773)
++|+|++..|||.+..++|+ -.+|||=++..-++
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch
Confidence 68999999999998644443 45788877666554
No 490
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=90.77 E-value=0.64 Score=47.40 Aligned_cols=84 Identities=20% Similarity=0.267 Sum_probs=53.3
Q ss_pred ccceeeeccCCCeEEEEeecCCCChh-------hhhhhhhcCCCHHHHHHHHHHHHHHHHHh---CCCccCCCCCCceEE
Q 004115 405 KVPTIFWEYTTPQILTMEYVPGIKIN-------RIQSLDELGVDRKRLGRYAVESYLEQILS---HGFFHADPHPGNIAV 474 (773)
Q Consensus 405 ~vP~v~~e~st~~vLVMEyieG~~L~-------d~~~l~~~~~d~~~la~~li~~~l~qI~~---~GffHaDpHPGNILV 474 (773)
.+|+++. .|+ ..+++||+..+++. ++.. ..-..+.++|..+++.. +.+.. ..|+-.|.+|+|+-|
T Consensus 21 ~~pk~lG-~CG-~~~v~E~~~~~~~~~~~~~l~~~~~--~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv 95 (188)
T PF12260_consen 21 PFPKLLG-SCG-RFYVVEYVGAGSLYGIYRPLSQFLQ--SPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGV 95 (188)
T ss_pred CCCCeee-ECC-CEEEEEeecCccccccccccccccc--cCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEE
Confidence 7899985 465 56789999876543 2211 00012334444433332 22222 347778999999999
Q ss_pred eccCCCcEEEEeecceeccCh
Q 004115 475 DDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 475 ~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
++ +|+++++|...+...+.
T Consensus 96 ~~--~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 96 ND--DGRLKLIDLDDVFVEDK 114 (188)
T ss_pred eC--CCcEEEEechhcchhHH
Confidence 85 78999999988876644
No 491
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.25 E-value=0.2 Score=51.05 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred hCCCccCCCCCCceEEeccCCC---cEEEEeecceeccChh
Q 004115 459 SHGFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISPN 496 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g---~I~LlDFGlv~~Ls~~ 496 (773)
...+.|+|+|++|+++...++| .+.++||..++.-+|.
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~ 159 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA 159 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence 3568999999999999752233 6999999999987764
No 492
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=88.81 E-value=0.67 Score=49.74 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=29.5
Q ss_pred CCccCCCCCCceEEeccCCC---cEEEEeecceeccChh
Q 004115 461 GFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISPN 496 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g---~I~LlDFGlv~~Ls~~ 496 (773)
-+.|+|+|++||++...++| .++++||-+++.=++-
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~ 254 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPA 254 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccccCCCcH
Confidence 37999999999999753344 7999999999877663
No 493
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=88.74 E-value=0.073 Score=63.58 Aligned_cols=118 Identities=22% Similarity=0.269 Sum_probs=68.9
Q ss_pred cCCCeEEEEeecCCCChhhhh-hhhhcCCCHHHHHHH--HHHHHHHHHH-hCCCccCCCCCCceEEeccCCC-cEEEEee
Q 004115 413 YTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRY--AVESYLEQIL-SHGFFHADPHPGNIAVDDVNGG-RLIFYDF 487 (773)
Q Consensus 413 ~st~~vLVMEyieG~~L~d~~-~l~~~~~d~~~la~~--li~~~l~qI~-~~GffHaDpHPGNILV~~~~~g-~I~LlDF 487 (773)
.....++.+||.+|..+.+.. .-+..+.+....... -...-+..+| ..|+-|+|++|.|.+++. .+ .++..||
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~df 169 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIADF 169 (601)
T ss_pred CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCCCc
Confidence 456679999999999887754 222112221111111 1222245567 779999999999999985 56 8999999
Q ss_pred cceeccCh-hhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCChHHH
Q 004115 488 GMMGSISP-NIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAV 535 (773)
Q Consensus 488 Glv~~Ls~-~~r~~l~~l~~al~~~D~~~i~~~l~~l-G~~~~~~D~~~l 535 (773)
|++..+.. ...+.....-.+ .++.+++++...- +...+..|.+..
T Consensus 170 ~~At~~~~~~g~~~~~~~~~g---~s~~y~a~E~~~~~~~~~~~~d~~S~ 216 (601)
T KOG0590|consen 170 GLATAYRNKNGAERSLKDRCG---SSPPYGAPEHLSGKAYRGPSVDVWSL 216 (601)
T ss_pred hhhccccccCCcceeeecccC---CCCCCCCcccccchhhcCCCcccccc
Confidence 99998876 333222221111 2555555544332 233344454433
No 494
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=87.49 E-value=0.26 Score=50.37 Aligned_cols=35 Identities=31% Similarity=0.562 Sum_probs=23.2
Q ss_pred CCCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 460 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 460 ~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
..+-|.|++||||++.. .++++.||||-.++.-++
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhccc
Confidence 46889999999999922 378999999999887544
No 495
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=84.18 E-value=0.76 Score=49.53 Aligned_cols=33 Identities=33% Similarity=0.553 Sum_probs=28.6
Q ss_pred CCccCCCCCCceEEeccCCCcEEEEeecceeccCh
Q 004115 461 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 495 (773)
Q Consensus 461 GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls~ 495 (773)
=+.|.|++|+|++.++ .|++.||||--++.=++
T Consensus 154 v~cH~Dl~~~N~l~t~--~~~l~LIDWEyAg~~D~ 186 (269)
T COG0510 154 VPCHNDLNPGNLLLTD--KGGLFLIDWEYAGLNDP 186 (269)
T ss_pred eeecCCCCccceEEcC--CCcEEEEecccCCCccH
Confidence 5899999999999984 69999999988886555
No 496
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=83.86 E-value=1 Score=48.93 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=28.9
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEeecceeccC
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 494 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlDFGlv~~Ls 494 (773)
..|+.|+|++++|+++++ ++.+.++||-.+..=.
T Consensus 195 ~~~lcHgD~~~~Nvl~~~--~~~~~iIDfd~~~~d~ 228 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDE--TRGGYFINFEKASFAS 228 (309)
T ss_pred ceeeeCCCCcHHhEEEcC--CCCEEEEEhhhcccCC
Confidence 458999999999999975 7789999999887543
No 497
>COG4857 Predicted kinase [General function prediction only]
Probab=80.05 E-value=1.8 Score=46.97 Aligned_cols=51 Identities=20% Similarity=0.417 Sum_probs=38.0
Q ss_pred hCCCccCCCCCCceEEeccCCCcEEEEe--ecceeccChhhHHHHHHHHHHHhhcC
Q 004115 459 SHGFFHADPHPGNIAVDDVNGGRLIFYD--FGMMGSISPNIREGLLEAFYGIYEKD 512 (773)
Q Consensus 459 ~~GffHaDpHPGNILV~~~~~g~I~LlD--FGlv~~Ls~~~r~~l~~l~~al~~~D 512 (773)
..-.+|+|+|.|.|++++ ...++|| |...|.+.-+.-.-++++++.+..++
T Consensus 227 aetLiHGDLHsGSIfvte---~etkvIDPEFaFYGPmafDiG~~iaNl~~~~~s~~ 279 (408)
T COG4857 227 AETLIHGDLHSGSIFVTE---KETKVIDPEFAFYGPMAFDIGMLIANLWMSLFSQK 279 (408)
T ss_pred hHHHhccccccCcEEeec---CcceeeCccccccCcchhhHHHHHHHHHHHHHhhh
Confidence 456799999999999984 5567777 77778777666666777777665443
No 498
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=78.08 E-value=1.7 Score=50.86 Aligned_cols=124 Identities=16% Similarity=0.116 Sum_probs=71.5
Q ss_pred eeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHH----HHHHHHhCCCccCCCCCCceEEeccCC-Cc
Q 004115 409 IFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VES----YLEQILSHGFFHADPHPGNIAVDDVNG-GR 481 (773)
Q Consensus 409 v~~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~l--i~~----~l~qI~~~GffHaDpHPGNILV~~~~~-g~ 481 (773)
..|+-++..++-+|++.. .+..+......-.....+-..+ ... .+.++|..+++|-|++|.||+... + ..
T Consensus 185 ~~~e~~~~lfiqtE~~~~-sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~--~~~s 261 (524)
T KOG0601|consen 185 PAWEGSGILFIQTELCGE-SLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS--DWTS 261 (524)
T ss_pred cccccCCcceeeeccccc-hhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccc--ccce
Confidence 345566777888888863 3333322111101111111111 112 567889999999999999999975 5 67
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCChHHHHH
Q 004115 482 LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 537 (773)
Q Consensus 482 I~LlDFGlv~~Ls~~~r~~l~~l~~al~~~D~~~i~~~l~~lG~~~~~~D~~~l~~ 537 (773)
..+.|||++..+++..-....... -=..+|.-++++.+.+- ......|..++..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~e 315 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGE 315 (524)
T ss_pred eecCCcceeEEccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhh
Confidence 899999999999876422221110 00145666677666542 3333445555443
No 499
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=77.62 E-value=26 Score=37.23 Aligned_cols=75 Identities=19% Similarity=0.255 Sum_probs=38.3
Q ss_pred cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH-HHHHHHHHHHhC------CCccCCCCCCceEEeccC---CCcE
Q 004115 413 YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY-AVESYLEQILSH------GFFHADPHPGNIAVDDVN---GGRL 482 (773)
Q Consensus 413 ~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~-li~~~l~qI~~~------GffHaDpHPGNILV~~~~---~g~I 482 (773)
+.....+.|||++|+++.........+....+.+.. +--..+..++.. ..-|---+|.||++.+.+ +...
T Consensus 88 l~~~~flimeYv~G~~l~~~~~~~~s~~~~~~~~~~LG~ii~lDi~inN~DRlPl~~~~~~GN~~Nil~~~~~~~~~~~~ 167 (238)
T cd05124 88 LEKAYLLIMEYVPGITLFKMTTHRASEYKGEERLIQLGKIIALDIFINNSDRLPLAIWRNSGNFDNIILKDIPNKNGATE 167 (238)
T ss_pred HhhhheeeeeecCCccchhhccccccchhhHHHHHHhhhhheeeeeecCCCCCCccccccCCCcceEEEEcccCcCCCce
Confidence 344468999999999998754433322222222211 111112222211 123445678999997531 2345
Q ss_pred EEEee
Q 004115 483 IFYDF 487 (773)
Q Consensus 483 ~LlDF 487 (773)
.++|.
T Consensus 168 ~~~d~ 172 (238)
T cd05124 168 DLIDS 172 (238)
T ss_pred eeccc
Confidence 55554
No 500
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=77.19 E-value=1.4 Score=51.67 Aligned_cols=81 Identities=22% Similarity=0.295 Sum_probs=53.7
Q ss_pred eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCCccCCCCCCceEEeccCCCcEEEEeec
Q 004115 411 WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 488 (773)
Q Consensus 411 ~e~st~~vLVMEyieG~~L~d~~~l~~~~~d~~~la~~li~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~I~LlDFG 488 (773)
|..-...++.-|||+|.+...-.... .-.+.....+...+ ..+.-|+...++|.|++|.||++.. +++-..+.|||
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~~~-~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~-~~~~~~~~~~~ 412 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSVTS-QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISN-DGFFSKLGDFG 412 (524)
T ss_pred ccccccccCchhhhcCcchhhhhHHH-HhcCcchhhhhHHHHHhccccccchhhhcccccccceeecc-chhhhhccccc
Confidence 44455668999999999877533221 11232222222222 3355688999999999999999985 23677888888
Q ss_pred ceecc
Q 004115 489 MMGSI 493 (773)
Q Consensus 489 lv~~L 493 (773)
+...+
T Consensus 413 ~~t~~ 417 (524)
T KOG0601|consen 413 CWTRL 417 (524)
T ss_pred ccccc
Confidence 87763
Done!