BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004117
(773 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225429898|ref|XP_002283635.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26 [Vitis vinifera]
Length = 1094
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/773 (67%), Positives = 623/773 (80%), Gaps = 6/773 (0%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S FCFPGEL+M+ RLSEPS L+LIYDLSAVLIHKGT VNSGHYIA IKDENTGQWWEFDD
Sbjct: 322 SAFCFPGELDMRERLSEPSDLELIYDLSAVLIHKGTTVNSGHYIAHIKDENTGQWWEFDD 381
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGA-NENHVDV-HLPSSEYYNGS 124
EHVSNLGHHPFGEGSSSS +K V++EP V +E + G N NH+++ L SSE S
Sbjct: 382 EHVSNLGHHPFGEGSSSSAAKPVQTEPSVHLSSTEPMNGVINGNHINIGQLQSSECSIVS 441
Query: 125 NVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIK 184
+ ++S DAYMLMYNLRR + + + V N+MEIE ++I+ ++D LP+HL ++IK
Sbjct: 442 GSQTYSSGDAYMLMYNLRRTTKSGEVRQTVSGANHMEIEGDIIYSDNDAALPAHLYEEIK 501
Query: 185 ELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWAD 244
ELN SYLD C+Q+K +K RELDCI+ER+QEVRS+LSE PV SLE+P++WIS+DWLR WAD
Sbjct: 502 ELNASYLDACQQYKSKKERELDCITERRQEVRSVLSEGPVLSLEDPYFWISTDWLRLWAD 561
Query: 245 KIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLID 304
I P LDNT IQCLHGKVP SK+GSMKR+SSKAWN F KY GGPAL+NDDYC+ CL++
Sbjct: 562 NITPPVLDNTPIQCLHGKVPVSKVGSMKRLSSKAWNMLFSKYGGGPALSNDDYCINCLVE 621
Query: 305 GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQWTRRKNLDAPSEADG 363
GA T+V AD+YRDRRK +K LAD V SGK ++G YYVSKSW QQW RRK +D+P +AD
Sbjct: 622 GASTMVSADNYRDRRKVMKELADAVHSGKCLDGNLYYVSKSWFQQWARRKIIDSPCDADA 681
Query: 364 GPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECP 423
GPT SIRCPHG+LMPE+A GAKRLLVPE LWLF E A VKPDD LGCS FP D E C
Sbjct: 682 GPTASIRCPHGKLMPEQAPGAKRLLVPENLWLFFCESANTVKPDDTLGCSVFPSDVEPCA 741
Query: 424 ECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYIS 483
CS L+EVA +ED++R KLK+RQNHEK+ALGK LS CKYYLLPS+WL+ WR+YI+
Sbjct: 742 TCSMELTEVASIEDTLREFKLKQRQNHEKIALGKGFALSSHCKYYLLPSSWLSTWRSYIN 801
Query: 484 PSGKN-ASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTEN 542
+GKN +SS++PE+LD VID +KC KH RLLERP +L+CKRG+I+Q+ SATDGLTI+T++
Sbjct: 802 ANGKNVSSSVQPEMLDSVIDMMKCGKHSRLLERPLELICKRGTIFQRFSATDGLTIITKD 861
Query: 543 DWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRP 602
DWK+FCEEWG +E G+S ++FSN N L GSC+E+ + EE P DE N EIES++P
Sbjct: 862 DWKFFCEEWGCTEEMGISAEIEFSNCVANNLAGSCEEMPIIEEHMSPHDEVNEEIESRQP 921
Query: 603 VVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRA 662
V++T PE+CE CIGERESCELMQKLNYC++DI V VRGKEAP+SILEAS ++ EPDRR
Sbjct: 922 VIKTSPEVCEVCIGERESCELMQKLNYCNEDIRVCFVRGKEAPKSILEASGTISEPDRRI 981
Query: 663 SKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
SKRSRKT + +NLKVS STSIYQLKMMIWES GV+KENQILHKG +ID E +TLAD+
Sbjct: 982 SKRSRKTNFGNSINLKVSGSTSIYQLKMMIWESFGVIKENQILHKGSTVIDGETSTLADM 1041
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
NIFPGD LWV+DSEIHE+RDIADELSD KM VQ EEGFRGTLLTSN+SSQVV
Sbjct: 1042 NIFPGDLLWVKDSEIHEYRDIADELSDHKMEVQQAEEGFRGTLLTSNISSQVV 1094
>gi|255558648|ref|XP_002520349.1| ubiquitin specific protease, putative [Ricinus communis]
gi|223540568|gb|EEF42135.1| ubiquitin specific protease, putative [Ricinus communis]
Length = 1058
Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/740 (67%), Positives = 601/740 (81%), Gaps = 8/740 (1%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S F FPG L+MQ+RLSEPS+++ IYDLSAVLIHKGTAVNSGHY A IKDE+TGQWWEFDD
Sbjct: 321 SAFAFPGVLDMQKRLSEPSEMEWIYDLSAVLIHKGTAVNSGHYTAHIKDEHTGQWWEFDD 380
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSS-EYYNGSN 125
EHVSNLG HPFGEGSSSS SKVV SEP C V +N NHVD P S + GS
Sbjct: 381 EHVSNLGLHPFGEGSSSSTSKVVHSEPPACPEVDTV---SNGNHVDAVQPDSLKPSIGST 437
Query: 126 VERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKE 185
E F+SNDAYMLMYNLRR K+ + +V N++ +E +D LPSHL +D+K
Sbjct: 438 AETFSSNDAYMLMYNLRRTKKVDDNRPMVCGANDIVLEGCESSLHDG-SLPSHLFEDVKV 496
Query: 186 LNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADK 245
N SYL+ C+++KL+K++E++ I+ER+QEVR++LSEAPV SLE+P YW+S+DWLRQWAD
Sbjct: 497 FNESYLEACQKYKLKKDKEVNHITERRQEVRTVLSEAPVQSLEKPSYWVSTDWLRQWADS 556
Query: 246 IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDG 305
I P LDNT IQC H KVP SK+G+MKR+S+++W K F KY GGP LTNDDYCM CL+DG
Sbjct: 557 ITPLALDNTPIQCSHEKVPVSKVGTMKRLSTESWAKLFSKYGGGPTLTNDDYCMACLMDG 616
Query: 306 AHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGP 365
A +VVCADSYRDRR S++ LA+DVL+GK +EGTYYVSK+WLQQW RRKN+DAPSEAD GP
Sbjct: 617 ARSVVCADSYRDRRTSMRDLANDVLAGKCLEGTYYVSKTWLQQWVRRKNVDAPSEADAGP 676
Query: 366 TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC 425
T SIRCPHG+LMP++A GAKRL VPE LWLF YEDA+ VKPDD GC+TF DSE+C +C
Sbjct: 677 TASIRCPHGKLMPDQAPGAKRLPVPENLWLFFYEDAITVKPDDSSGCTTFSSDSEQCSQC 736
Query: 426 SDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPS 485
+ LSEVACLEDS+RA KLK+RQNHEKL++GKSIPLSL CKYYL+PS+WLTKWRNY++ S
Sbjct: 737 CEELSEVACLEDSLRAVKLKQRQNHEKLSMGKSIPLSLHCKYYLVPSSWLTKWRNYVTAS 796
Query: 486 GKN-ASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDW 544
GKN +SS+EPE LD VIDSLKCEKH RLLERPPDLV KRG ++QKGSATDGLTI+T+ DW
Sbjct: 797 GKNISSSVEPEALDIVIDSLKCEKHFRLLERPPDLVTKRGILFQKGSATDGLTIITDEDW 856
Query: 545 KWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVV 604
FCEEWGG KEKG+S +++ N N L G + SEE +DE N+E E ++P++
Sbjct: 857 NNFCEEWGGNKEKGISAVIEPINVVENTLSGFSEVTAASEEQLNRQDEVNDETEGRQPII 916
Query: 605 RTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASK 664
RT PEICEDCIGE+ESC+LMQKLNY ++DI V LVRGKEAPRSILEAS++ EP+RRASK
Sbjct: 917 RTCPEICEDCIGEKESCKLMQKLNYSNEDIHVTLVRGKEAPRSILEASKTTSEPERRASK 976
Query: 665 RSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNI 722
RSR+T + V+LKVS TSIYQLKMMIWESLGVVKENQ+LHKG+ ++D++ ATLADLNI
Sbjct: 977 RSRRTSYGNSVHLKVSGCTSIYQLKMMIWESLGVVKENQVLHKGEMVLDKDDATLADLNI 1036
Query: 723 FPGDKLWVQDSEIHEHRDIA 742
FPGDKLWVQDSEIHEHRDIA
Sbjct: 1037 FPGDKLWVQDSEIHEHRDIA 1056
>gi|296081825|emb|CBI20830.3| unnamed protein product [Vitis vinifera]
Length = 1044
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/771 (65%), Positives = 594/771 (77%), Gaps = 52/771 (6%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S FCFPGEL+M+ RLSEPS L+LIYDLSAVLIHKGT VNSGHYIA IKDENTGQWWEFDD
Sbjct: 322 SAFCFPGELDMRERLSEPSDLELIYDLSAVLIHKGTTVNSGHYIAHIKDENTGQWWEFDD 381
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNV 126
EHVSNLGHHPFGEGSSSS +K L SSE S
Sbjct: 382 EHVSNLGHHPFGEGSSSSAAK--------------------------PLQSSECSIVSGS 415
Query: 127 ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKEL 186
+ ++S DAYMLMYNLRR + ++D LP+HL ++IKEL
Sbjct: 416 QTYSSGDAYMLMYNLRRTTKS----------------------DNDAALPAHLYEEIKEL 453
Query: 187 NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI 246
N SYLD C+Q+K +K RELDCI+ER+QEVRS+LSE PV SLE+P++WIS+DWLR WAD I
Sbjct: 454 NASYLDACQQYKSKKERELDCITERRQEVRSVLSEGPVLSLEDPYFWISTDWLRLWADNI 513
Query: 247 FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGA 306
P LDNT IQCLHGKVP SK+GSMKR+SSKAWN F KY GGPAL+NDDYC+ CL++GA
Sbjct: 514 TPPVLDNTPIQCLHGKVPVSKVGSMKRLSSKAWNMLFSKYGGGPALSNDDYCINCLVEGA 573
Query: 307 HTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQWTRRKNLDAPSEADGGP 365
T+V AD+YRDRRK +K LAD V SGK ++G YYVSKSW QQW RRK +D+P +AD GP
Sbjct: 574 STMVSADNYRDRRKVMKELADAVHSGKCLDGNLYYVSKSWFQQWARRKIIDSPCDADAGP 633
Query: 366 TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC 425
T SIRCPHG+LMPE+A GAKRLLVPE LWLF E A VKPDD LGCS FP D E C C
Sbjct: 634 TASIRCPHGKLMPEQAPGAKRLLVPENLWLFFCESANTVKPDDTLGCSVFPSDVEPCATC 693
Query: 426 SDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPS 485
S L+EVA +ED++R KLK+RQNHEK+ALGK LS CKYYLLPS+WL+ WR+YI+ +
Sbjct: 694 SMELTEVASIEDTLREFKLKQRQNHEKIALGKGFALSSHCKYYLLPSSWLSTWRSYINAN 753
Query: 486 GKN-ASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDW 544
GKN +SS++PE+LD VID +KC KH RLLERP +L+CKRG+I+Q+ SATDGLTI+T++DW
Sbjct: 754 GKNVSSSVQPEMLDSVIDMMKCGKHSRLLERPLELICKRGTIFQRFSATDGLTIITKDDW 813
Query: 545 KWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVV 604
K+FCEEWG +E G+S ++FSN N L GSC+E+ + EE P DE N EIES++PV+
Sbjct: 814 KFFCEEWGCTEEMGISAEIEFSNCVANNLAGSCEEMPIIEEHMSPHDEVNEEIESRQPVI 873
Query: 605 RTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASK 664
+T PE+CE CIGERESCELMQKLNYC++DI V VRGKEAP+SILEAS ++ EPDRR SK
Sbjct: 874 KTSPEVCEVCIGERESCELMQKLNYCNEDIRVCFVRGKEAPKSILEASGTISEPDRRISK 933
Query: 665 RSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNI 722
RSRKT + +NLKVS STSIYQLKMMIWES GV+KENQILHKG +ID E +TLAD+NI
Sbjct: 934 RSRKTNFGNSINLKVSGSTSIYQLKMMIWESFGVIKENQILHKGSTVIDGETSTLADMNI 993
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
FPGD LWV+DSEIHE+RDIADELSD KM VQ EEGFRGTLLTSN+SSQVV
Sbjct: 994 FPGDLLWVKDSEIHEYRDIADELSDHKMEVQQAEEGFRGTLLTSNISSQVV 1044
>gi|224066813|ref|XP_002302228.1| predicted protein [Populus trichocarpa]
gi|222843954|gb|EEE81501.1| predicted protein [Populus trichocarpa]
Length = 1055
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/774 (64%), Positives = 594/774 (76%), Gaps = 35/774 (4%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+KKITS F FPGEL+M RLSEPSQL+ IYDLSAVLIHKGTAVNSGHYIA IKDENTGQW
Sbjct: 315 RKKITSAFGFPGELDMGLRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQW 374
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
W FDDEHVSNLGH PFGEGSSSS +K + S
Sbjct: 375 WVFDDEHVSNLGHRPFGEGSSSSTAKSLESNV---------------------------- 406
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
GS+ E F+S DAY LMYNL+R +++ +++ H N +++E N LP HL +
Sbjct: 407 -GSHKESFSSIDAYRLMYNLKRTRKNDDKRN--HIANIIQLEGHKGLHN-GFHLPPHLSE 462
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
DIK++N YL CE++KL+K RE+ ++ER+QEVRS+LSEAPV SLEEPFYW+S+ WLRQ
Sbjct: 463 DIKDVNAVYLAVCEEYKLKKEREVHHVAERRQEVRSILSEAPVRSLEEPFYWVSTAWLRQ 522
Query: 242 WADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTC 301
WAD + P +DN IQC HG+VP SK+GSMKR+S K W F KY+GGPAL+N + CMTC
Sbjct: 523 WADNVIPGAIDNKPIQCSHGEVPVSKVGSMKRLSVKTWGILFSKYDGGPALSNSNCCMTC 582
Query: 302 LIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEA 361
LID A +VV ADSYRD+R ++ LA+DV++ K +GTY+VSK+WLQQW RRKN+DAPSEA
Sbjct: 583 LIDSAQSVVSADSYRDQRTLMRDLANDVITKKCSDGTYFVSKTWLQQWVRRKNIDAPSEA 642
Query: 362 DGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEE 421
D GPT SIRC HGQL P K GAKRLLVPE LWLF+Y+DA+ VKPDD LGC+TFP DSE
Sbjct: 643 DAGPTASIRCRHGQLRP-KQTGAKRLLVPEKLWLFLYKDAVAVKPDDPLGCTTFPSDSEL 701
Query: 422 CPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNY 481
CPECSD LSEVAC EDSIR KLK RQNHE+LA GKSIPLSL+C YYL+PS+WLTKWRNY
Sbjct: 702 CPECSDELSEVACFEDSIREMKLKHRQNHERLATGKSIPLSLNCTYYLMPSSWLTKWRNY 761
Query: 482 ISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTE 541
S SGKN SS+EPE+LD VID+LKCE+H RLLERPP L+ KRG + QK S+TD LTI+TE
Sbjct: 762 TSASGKNTSSVEPEVLDPVIDALKCEQHSRLLERPPYLMNKRGMLIQKSSSTDALTIITE 821
Query: 542 NDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQR 601
NDW FCEEWGG KEKG+ I++ S+ + L G +++ L ++ +DE +N E ++
Sbjct: 822 NDWNSFCEEWGGNKEKGIMAIIESSDVTESNLSGCREDVSLCKDHPSSQDEASNGPEIRQ 881
Query: 602 PVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRR 661
PV+RT PEICEDCIGER+S EL +KLNY ++DISV LVRGKEAPRSILEAS + E DRR
Sbjct: 882 PVIRTSPEICEDCIGERKSHELAKKLNYFNEDISVSLVRGKEAPRSILEASSATSETDRR 941
Query: 662 ASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLAD 719
ASKR RKT + VNLKVS STS+Y+LKMMIWESLGVVKENQILHKG IIDQE ATLAD
Sbjct: 942 ASKRPRKTSYGTSVNLKVSGSTSLYRLKMMIWESLGVVKENQILHKGSVIIDQESATLAD 1001
Query: 720 LNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
L+IFPGDKLWVQDSEIHEHRDIADE++DQK N Q E+GF GTLLT+ +S VV
Sbjct: 1002 LSIFPGDKLWVQDSEIHEHRDIADEIADQKANAQDPEKGFWGTLLTTTTASPVV 1055
>gi|224082308|ref|XP_002306642.1| predicted protein [Populus trichocarpa]
gi|222856091|gb|EEE93638.1| predicted protein [Populus trichocarpa]
Length = 1084
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/776 (65%), Positives = 608/776 (78%), Gaps = 10/776 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+KKITS F FPGEL+M RRLSEPSQL+ IYDLSAVLIHKGTAVNSGHYIA IKDENTGQW
Sbjct: 315 RKKITSAFGFPGELDMGRRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQW 374
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDEHVSNLG PFGEG SSS +K V S+ V + + + V S E
Sbjct: 375 WEFDDEHVSNLGRRPFGEGFSSS-AKGVHSDKVSPSCAGATLADTSRSMDAVQPQSLESN 433
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLP-SHLG 180
S E F+S DAY LMYNLRR +++ ++D H NN+++E N F P S L
Sbjct: 434 IHSCKEIFSSTDAYRLMYNLRRTRKNDGKRD--HIANNIQLEGHKGLHNG--FHPASQLF 489
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+DI ++N SY CE++KL+K +E+ I+ER++EVRS+LSEAPV +EPFYW+S+DWLR
Sbjct: 490 EDINDMNASYAAACEEYKLKKEKEVRHITERREEVRSVLSEAPVRLHQEPFYWVSTDWLR 549
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
QWAD + P +DN IQCLHGKVP SK+GSMKR+S+KAW F KY+GGPALTN D CM
Sbjct: 550 QWADNVTPGVIDNKPIQCLHGKVPVSKVGSMKRLSAKAWGILFSKYDGGPALTNSDCCMA 609
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
CLIDGA +VV ADSYRD+R ++ LA+DV++GK ++G Y+VSK+WLQQW RRKN+DAPSE
Sbjct: 610 CLIDGAKSVVFADSYRDQRTLMRDLANDVIAGKCLDGAYFVSKTWLQQWVRRKNIDAPSE 669
Query: 361 ADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSE 420
AD GPT SI C HGQL PE+A GAKRLLVPE LW F+Y+DA+ VK DD LGC+TFP DS
Sbjct: 670 ADAGPTASIMCRHGQLRPEQA-GAKRLLVPETLWHFLYKDAVAVKSDDPLGCTTFPSDSA 728
Query: 421 ECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRN 480
+C ECSD LSEVAC EDSIR KLK+RQNHEKLA GKSIPLSL+C YYL+PS+WLTKWRN
Sbjct: 729 QCSECSDELSEVACFEDSIREMKLKQRQNHEKLATGKSIPLSLNCTYYLMPSSWLTKWRN 788
Query: 481 YISPSGKN-ASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIV 539
YI+ SGKN +SS+EPE+LD VID+LKCE H RLLERPPDLV KRG + QK S TD LTI+
Sbjct: 789 YINSSGKNISSSVEPEVLDPVIDALKCEWHSRLLERPPDLVNKRGVLIQKSSTTDALTII 848
Query: 540 TENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIES 599
TENDW FCE+WGG KEKG+ ++ S+ A N L GS +++ + ++ +DE NN+ E
Sbjct: 849 TENDWNSFCEDWGGNKEKGIMATIESSDVAENNLGGSQEDVFVFKDHPSSQDEANNDPEI 908
Query: 600 QRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPD 659
++P++RT PEICEDCIGER+S EL +KLNY ++DI+V LVRGKEAPRSILEAS + E D
Sbjct: 909 RQPLIRTSPEICEDCIGERKSRELAKKLNYFNEDINVSLVRGKEAPRSILEASSTTPETD 968
Query: 660 RRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATL 717
RRASKRSRKT + VNLKVS STS+YQLKMMIWESLGVVKENQILHKG IIDQE ATL
Sbjct: 969 RRASKRSRKTSYGTSVNLKVSGSTSLYQLKMMIWESLGVVKENQILHKGSMIIDQESATL 1028
Query: 718 ADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
ADL+IFPGDKLWVQDSEIHEHRDIADE++DQK N QH E+GF+GTLLT+ SSQV
Sbjct: 1029 ADLSIFPGDKLWVQDSEIHEHRDIADEITDQKANAQHPEKGFQGTLLTTTTSSQVA 1084
>gi|449441976|ref|XP_004138758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Cucumis
sativus]
Length = 1088
Score = 984 bits (2543), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/772 (64%), Positives = 591/772 (76%), Gaps = 8/772 (1%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S FPG L+M+ RLSE SQ + IYDLSAVLIHKGTAVNSGHYIA IKDENTGQWWEFDD
Sbjct: 320 SALSFPGVLDMRERLSESSQSESIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQWWEFDD 379
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSEYYNGS 124
EHVS LGHHPFGE SS++ SK V++E V E V E + V S+E
Sbjct: 380 EHVSKLGHHPFGEKSSNTNSKSVKTELAVPLGSKEEVNATAEGNPTNGVLQQSTESGVRC 439
Query: 125 NVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIK 184
+ F+SNDAYMLMYNLR + + R VN E+E M+ F D +FLPSHL +I
Sbjct: 440 PTDVFSSNDAYMLMYNLRCTGKATNRVTSCI-VNGKEVEGNMVPFQDGLFLPSHLCDEIS 498
Query: 185 ELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWAD 244
LN S++ C++++ +K EL CI+ R+QEVRS+LSEAPV SLEEPF WIS+DWLRQWAD
Sbjct: 499 SLNESHVIACQEYESKKEVELGCINNRRQEVRSILSEAPVHSLEEPFCWISTDWLRQWAD 558
Query: 245 KIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLID 304
K+ P LDN+ IQCLHGKVP SK+ S+KR+S KAW+K KY GG LTN+D CM CLI
Sbjct: 559 KVSPPILDNSQIQCLHGKVPISKVTSIKRLSVKAWDKLSSKYGGGSKLTNEDICMECLIA 618
Query: 305 GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGG 364
GA VVCADSYRDRR S+K +A LSG GTY VS++WLQQW +RK LDAPSEAD
Sbjct: 619 GARNVVCADSYRDRRISMKEIALSALSGNYPNGTYVVSRTWLQQWVKRKILDAPSEADAE 678
Query: 365 PTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPE 424
PT SI+CPHGQL+PE+A GAKR+L+PE LWLFIYEDA+ VKPDD G TFP DS +C
Sbjct: 679 PTASIKCPHGQLLPEQAAGAKRVLIPEDLWLFIYEDALTVKPDDPTGVPTFPSDSRQCSL 738
Query: 425 CSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISP 484
CS+ LSEVA +EDSIR KLK+RQNHE+LA+GK IPLSL+CKYYL+P++WL+KWRNYI+
Sbjct: 739 CSEELSEVAVMEDSIRGVKLKQRQNHERLAVGKFIPLSLNCKYYLVPTSWLSKWRNYINA 798
Query: 485 SGKNASSIE-PEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTEND 543
SGK+AS +E PE LDGVI+ L+CEKH RLLERPPDL+CKR ++ QK SA D LT+++END
Sbjct: 799 SGKSASFVEKPENLDGVINLLRCEKHSRLLERPPDLICKRATMQQK-SAADVLTLISEND 857
Query: 544 WKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPV 603
WK FCEEW G + G+S +V+ S+ GN++ GS KE ++EE DE NN + ++ +
Sbjct: 858 WKSFCEEWEGSEACGISAVVESSSCVGNDIDGSSKEKTMAEEDLCSNDEVNNG-DFKQIL 916
Query: 604 VRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRAS 663
++T PEICE+CIGERESCELMQKLNY +DI V+ RGK+AP+SILEASES +PDRR S
Sbjct: 917 LKTDPEICEECIGERESCELMQKLNYTGEDICVYFSRGKDAPKSILEASESTVDPDRRIS 976
Query: 664 KRSRKTRS--FVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLN 721
KR+RKT S FVNLKVS STS+YQLKMMIWE GVVKENQIL KG RIID E TLAD N
Sbjct: 977 KRARKTNSGNFVNLKVSGSTSVYQLKMMIWECFGVVKENQILRKGNRIIDGETDTLADKN 1036
Query: 722 IFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
IFPGDKLWV DSEIHEHRDIADELSD KMN+QH EEGFRGTLL +N+SS+VV
Sbjct: 1037 IFPGDKLWVMDSEIHEHRDIADELSDPKMNIQHTEEGFRGTLLAANVSSEVV 1088
>gi|356554385|ref|XP_003545527.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine
max]
Length = 1083
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/777 (62%), Positives = 595/777 (76%), Gaps = 15/777 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
MKKK+TS F FP EL+M+ RLSEPSQ +LIYDLSAVLIHKGTAVNSGHYIA IKD NTGQ
Sbjct: 315 MKKKVTSAFSFPAELDMRHRLSEPSQFELIYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQ 374
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
WWEFDDE+V+NLG HPFGEG+SS+ SK V+++ V+ SE + A+ N +D S
Sbjct: 375 WWEFDDENVTNLGCHPFGEGTSST-SKSVKTD-VLHSNCSEAML-ADSNGLDATHAQSLL 431
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
VE F+S+DAYMLMY+L+ K ++ +V+ N +E+E + D LPSH
Sbjct: 432 -----VETFSSSDAYMLMYHLKHSKNVGEKGGIVYGAN-LEVEGNAVTAQDSACLPSHFC 485
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
K+I+ N SYLD CEQ+K RK EL I+ER+QEVRS+L+EAP LE+P++WI SDWLR
Sbjct: 486 KEIQNFNASYLDSCEQYKHRKELELSHINERRQEVRSILAEAPTQPLEQPYFWICSDWLR 545
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
QWAD I P LDNTSIQC HGKVP SK+ SMKR+SSKAW+K KY GGP L+++D C
Sbjct: 546 QWADNIIPIALDNTSIQCSHGKVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWD 605
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
CLIDGA VV AD+YRD+R+SLK LA D+L G +G YYVS+ WLQQW +RK +DAPSE
Sbjct: 606 CLIDGAQNVVSADTYRDQRESLKRLARDILDGNCEDGMYYVSRPWLQQWWKRKVVDAPSE 665
Query: 361 ADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSE 420
AD GPT +I CPHGQLMPE+A GAKRLLVPE WLF+Y+DA+ VKPDD LGC TFPLDS
Sbjct: 666 ADAGPTAAICCPHGQLMPEQAVGAKRLLVPEDFWLFLYKDAISVKPDDPLGCPTFPLDSR 725
Query: 421 ECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRN 480
C +CSD LSE ACLEDS+R K +RQNHEKL +GKS+PLSL CKY+L+PS+W++KWRN
Sbjct: 726 RCSQCSDELSEEACLEDSLRLVKQMQRQNHEKLFVGKSMPLSLHCKYFLVPSSWISKWRN 785
Query: 481 YISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVT 540
YI+ + KN S +PE LDGVIDSL CEKH RL+ERPP+LV +RG+I + S+ GLTI++
Sbjct: 786 YINLAVKN--SDKPETLDGVIDSLMCEKHSRLIERPPELVFRRGAIIARESSVSGLTIIS 843
Query: 541 ENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQ 600
ENDWK FCEEW GI+ KG+S ++ N++ N L GSC+E+ + E+ D+ NNE +
Sbjct: 844 ENDWKCFCEEWSGIETKGISARIENVNDSENALTGSCREMPICEDQLNTWDKVNNESGNG 903
Query: 601 RPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDR 660
V++T PE+CE C+GE+ESCELMQKLNYC++DISV LVRGKE P+SILEAS+ E DR
Sbjct: 904 HIVIKTCPEVCESCVGEKESCELMQKLNYCNQDISVILVRGKEVPKSILEASKGFVEIDR 963
Query: 661 RASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRII--DQECAT 716
R SKRSRKT+ S ++LKVSASTSIYQLKMMIWES VVKENQIL KG R I D E AT
Sbjct: 964 RVSKRSRKTKNGSSISLKVSASTSIYQLKMMIWESFAVVKENQILQKGDRTIDVDNEYAT 1023
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
L D NIF GD++ V+DSEIHE+RDIADEL D++M QH E GFRGTLLTSN+SSQV+
Sbjct: 1024 LVDANIFAGDQIIVRDSEIHENRDIADELCDEEMETQHTEAGFRGTLLTSNVSSQVL 1080
>gi|357466469|ref|XP_003603519.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355492567|gb|AES73770.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1083
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/771 (61%), Positives = 582/771 (75%), Gaps = 11/771 (1%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S F FP +L+MQ RL E SQ DL+YDLSAVLIHKGT VNSGHYIA IKD+NTGQWWEFDD
Sbjct: 320 SAFSFPAQLDMQHRLPELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDKNTGQWWEFDD 379
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNV 126
EHV+NLG+HPFGEGSSSS +K + + + R+ +N N + + S +
Sbjct: 380 EHVTNLGNHPFGEGSSSSTTKSIAIDAIHSDCSEARIAESNGNGF-----HTTHSQSSLI 434
Query: 127 ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKEL 186
E F+S DAYMLMY+LR K + +V ++ EIE + DD LPSHL +I +
Sbjct: 435 ETFSSCDAYMLMYHLRHTKGIKENGGIVCGASHKEIEGVVATAQDDASLPSHLYDEICNV 494
Query: 187 NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI 246
N SYLD C+Q+ RK EL I++R+ EVRS+L+EAPVP LE PFYWISSDWLRQWAD I
Sbjct: 495 NASYLDACQQYSHRKELELSRITDRRHEVRSILAEAPVPPLERPFYWISSDWLRQWADNI 554
Query: 247 FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGA 306
P+++DNTSIQC HGKVP SK+ S+KR+S KAW+K F KY G P L++DD+C CLI GA
Sbjct: 555 IPTSIDNTSIQCSHGKVPVSKVPSIKRLSVKAWDKLFSKYGGIPTLSHDDHCRDCLICGA 614
Query: 307 HTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPT 366
TVV AD+YR RR+SLK LA D+L G ++G Y++S+ WLQQW +RK LDAPSEAD G T
Sbjct: 615 QTVVSADTYRGRRESLKSLARDILDGNCLDGKYFISRPWLQQWWKRKVLDAPSEADAGLT 674
Query: 367 TSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECS 426
+I CPHG LMPE+A GAKR+L+PE WLF+YEDA+ VKPDD +G P DS EC +C+
Sbjct: 675 AAINCPHGLLMPEQAPGAKRVLIPETFWLFLYEDAISVKPDDPVGGPALPSDSLECSQCT 734
Query: 427 DALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSG 486
LS+ ACLEDS+R K K+RQNHEKL KS+PLS++CKY+L+ S+W++KWRNYISP
Sbjct: 735 VELSQAACLEDSLRVVKQKQRQNHEKLFQAKSMPLSVNCKYFLVASSWISKWRNYISPPF 794
Query: 487 KNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKW 546
KN +PE LDGVIDSL CEKH RL+ERPP+LV +RG+I Q+ S+ GLTI++ENDW
Sbjct: 795 KNLD--KPETLDGVIDSLICEKHSRLIERPPELVFRRGAIIQRESSAGGLTIISENDWIC 852
Query: 547 FCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRT 606
FCEEWGG + KG+S +D+ N++ N L GSC E+L+ E+ D+ NNE + + +++T
Sbjct: 853 FCEEWGGSETKGISATIDYINDSDNLLTGSCDEMLICEDQSHTEDKMNNENGTGQILIKT 912
Query: 607 FPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRS 666
PE+CE CIGE+ESCELM KLNYC++DI V LVRGKE P+SILEAS+ + E DRR SKRS
Sbjct: 913 CPEVCESCIGEKESCELMHKLNYCNEDICVILVRGKEVPKSILEASKGLVETDRRISKRS 972
Query: 667 RKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQ--ECATLADLNI 722
RKT+ S V+LKVSASTS+YQLKMMIWES GVVKENQILHKG RIID ECATLAD NI
Sbjct: 973 RKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDMDDECATLADANI 1032
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
F D++ V+DSEIHE+RDIADEL KM+VQH EEGFRGTLLT+N+SSQVV
Sbjct: 1033 FARDQIIVRDSEIHENRDIADELCCDKMDVQHTEEGFRGTLLTANISSQVV 1083
>gi|356515521|ref|XP_003526448.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine
max]
Length = 1085
Score = 949 bits (2453), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/770 (61%), Positives = 589/770 (76%), Gaps = 11/770 (1%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S F FP EL+M+ R+SE SQ +L+YDLSAVLIHKGT NSGHYIA IKD NTGQWWEFDD
Sbjct: 320 SAFSFPAELDMRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDD 379
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNV 126
EHV+NLG HPFGE SSSS +K ++++ + V +N N + S+ + S V
Sbjct: 380 EHVTNLGFHPFGEESSSSTTKSIKTDAIHFDNSEAMVADSNGNGL-----SATHSQSSKV 434
Query: 127 ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKEL 186
E F S+DAYMLMY+L+ K K V+ VN+ E E ++ + + LPSH+ +I+
Sbjct: 435 ETFLSSDAYMLMYHLKHTKSVGKSGGVICGVNHKEREGVVVAVQNGVPLPSHIYDEIQSF 494
Query: 187 NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI 246
N SY D C+Q+ RK +L ISER+QEVRS+L+EAPV SLE+PFYWISS+WLRQWAD I
Sbjct: 495 NTSYDDACQQYNNRKELQLSRISERRQEVRSVLAEAPVQSLEQPFYWISSEWLRQWADNI 554
Query: 247 FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGA 306
P LDNTS+QC HGKVP S + SMKR+S+KAW+ F KY GGPAL++D++C CLI GA
Sbjct: 555 IPIPLDNTSVQCSHGKVPVSNVTSMKRLSAKAWDMLFSKYGGGPALSHDNHCRDCLIHGA 614
Query: 307 HTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPT 366
TVV AD+YRDRR+S+K LA D+L G ++G YY+S+ WLQQW +RK LDAPSEAD GPT
Sbjct: 615 MTVVSADTYRDRRESMKSLARDILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPT 674
Query: 367 TSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECS 426
+I CPHGQLMPE+A GAKR+L+PE WLF+YEDA+ V PDD LG TF DSEEC +CS
Sbjct: 675 AAISCPHGQLMPEQAPGAKRVLIPESFWLFLYEDAVSVTPDDPLGGPTFSSDSEECSQCS 734
Query: 427 DALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSG 486
+ LSEVACLEDS+R K K+RQNHEKL KS+PLS+ KY+L+PS+W++KWRNYISP+
Sbjct: 735 NELSEVACLEDSLRLVKQKQRQNHEKLFQAKSMPLSMHSKYFLVPSSWISKWRNYISPTL 794
Query: 487 KNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKW 546
KN S +PE LDGVIDS+ CEKH +L+ERPP+LV +RG+I Q+ S+ LTIV+ENDWK
Sbjct: 795 KN--SDKPETLDGVIDSMLCEKHSQLIERPPELVFRRGAIIQRESSVSCLTIVSENDWKC 852
Query: 547 FCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRT 606
FCEEWG I+ KG+S +D N++ N L GS +E+L+ ++ D+ N E + + +++T
Sbjct: 853 FCEEWGSIETKGISATIDHVNDSENVLTGSSEEMLVCKDQLSTADKMNFENGTGQILIKT 912
Query: 607 FPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRS 666
PE+CE CIGER+SCELMQKLNYC++DI V LVRGKE PRSILEAS+ E DRR SKRS
Sbjct: 913 CPEVCESCIGERKSCELMQKLNYCNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRS 972
Query: 667 RKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRII--DQECATLADLNI 722
RKT+ S ++LKVSASTS+YQLKMMIWES GVVKENQILHKG RII D E ATLAD+NI
Sbjct: 973 RKTKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDSDNEFATLADVNI 1032
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
F GD++ V+DSEIHE+RDIADEL D KM++QH EEGFRGTLLT+N+SSQ+
Sbjct: 1033 FAGDQVIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTANVSSQL 1082
>gi|356507807|ref|XP_003522655.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine
max]
Length = 1085
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/770 (61%), Positives = 589/770 (76%), Gaps = 11/770 (1%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S F FP EL+M+ R+SE SQ +L+YDLSAVLIHKGT NSGHYIA IKD NTGQWWEFDD
Sbjct: 320 SAFSFPAELDMRHRMSELSQFNLVYDLSAVLIHKGTGANSGHYIAHIKDVNTGQWWEFDD 379
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNV 126
EHV+NLG HPFGE SSSS +K ++++ + V +N N ++ + + S V
Sbjct: 380 EHVTNLGFHPFGEESSSSTTKSIKTDAIHSDNSEAMVADSNGNGLN-----ATHSLSSQV 434
Query: 127 ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKEL 186
E F S+DAYMLMY+L++ K + V+ N+ E E ++ + + LPSH+ +I+
Sbjct: 435 ETFLSSDAYMLMYHLKQTKNVGESGGVICGANHKESEGVVVAVQNGVPLPSHIYDEIQSF 494
Query: 187 NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI 246
N SY D C ++ RK EL ISER+QEVRS+L+EAPV LE+PFYWISS+WLRQWAD I
Sbjct: 495 NASYDDACRRYNNRKELELSLISERRQEVRSVLAEAPVQPLEQPFYWISSEWLRQWADNI 554
Query: 247 FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGA 306
P LDNT +QC HGKVP SK+ SMKR+S+KAW+ F KY GGPAL++D++C CLI GA
Sbjct: 555 IPIPLDNTPVQCSHGKVPVSKVTSMKRLSAKAWDTLFSKYGGGPALSHDNHCRDCLIHGA 614
Query: 307 HTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPT 366
TVV AD+YRDRR+S+K LA D+L G ++G YY+S+ WLQQW +RK LDAPSEAD GPT
Sbjct: 615 MTVVSADTYRDRRESMKSLARDILDGNCLDGKYYISRPWLQQWWKRKVLDAPSEADAGPT 674
Query: 367 TSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECS 426
+I CPHGQLMPE+A GAKR+L+PEI WLF+YEDA+ VKPDD LG TF DS+EC +CS
Sbjct: 675 AAISCPHGQLMPEQAPGAKRVLIPEIFWLFLYEDAVSVKPDDPLGGPTFSSDSDECSQCS 734
Query: 427 DALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSG 486
+ LSEVACLEDS+R K K+RQNHEKL KS+ LSL KY+L+P +W++KWRNYISP+
Sbjct: 735 NELSEVACLEDSLRLVKQKQRQNHEKLFQAKSLQLSLHSKYFLVPLSWISKWRNYISPTL 794
Query: 487 KNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKW 546
KN S +PE LDGVIDSL CEKH RL+ERPP+LV +RG+I Q+ S+ GLTIV+ENDWK
Sbjct: 795 KN--SDKPETLDGVIDSLLCEKHSRLIERPPELVFRRGAIIQRESSVSGLTIVSENDWKC 852
Query: 547 FCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRT 606
FCEEWGGI+ KG+S +D N++ N L GS +E+ + ++ D+ N E + + +++T
Sbjct: 853 FCEEWGGIETKGISATIDHVNDSENVLTGSSEEMQVCKDQLSTADKMNFENGTGQNLIKT 912
Query: 607 FPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRS 666
PE+CE CIGERESCELMQKLNYC++DI V LVRGKE PRSILEAS+ E DRR SKRS
Sbjct: 913 CPEVCESCIGERESCELMQKLNYCNEDICVILVRGKEVPRSILEASKGFVETDRRVSKRS 972
Query: 667 RKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRII--DQECATLADLNI 722
RK++ + ++LKVSASTS+YQLKMMIWES GVVKENQILHKG RII D ECATLAD+NI
Sbjct: 973 RKSKNGNSISLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIVGDDECATLADVNI 1032
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
F GD++ V+DSEIHE+RDIADEL D KM++QH EEGFRGTLLT+N+SSQ+
Sbjct: 1033 FAGDQIIVRDSEIHENRDIADELCDDKMDLQHTEEGFRGTLLTANVSSQL 1082
>gi|356561901|ref|XP_003549215.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Glycine
max]
Length = 1162
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/775 (60%), Positives = 580/775 (74%), Gaps = 14/775 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
MKKK+TS F FP EL+M RLSEPSQ +L+YDLSAVLIHKGTAVNSGHYIA IKD NTGQ
Sbjct: 315 MKKKVTSAFSFPAELHMHHRLSEPSQFELMYDLSAVLIHKGTAVNSGHYIAHIKDVNTGQ 374
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
WWEFDDE+V+NLG HP GEGSSS+ V V A+ N +D + +
Sbjct: 375 WWEFDDENVTNLGCHPVGEGSSSTSKSVKTD---VLHSNCSGAMLADSNGLD-----ATH 426
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +E F+S+DAYMLMY+L+ K ++ +V+ N E+ + D LPSHL
Sbjct: 427 SRSSPLETFSSSDAYMLMYHLKHSKNVGEKGGIVYGANLEEVAGNAVTAQDSACLPSHLC 486
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
++I+ N SYLD CEQ+K RK EL I+ER+QEVRS+L+EAP SL++P++WI SDWLR
Sbjct: 487 EEIQSFNASYLDSCEQYKHRKVLELSRINERRQEVRSILAEAPTQSLQQPYFWICSDWLR 546
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
QWAD + P LDNTSIQC HGKVP SK+ SMKR+SSKAW+K KY GGP L+++D C
Sbjct: 547 QWADNLIPIALDNTSIQCSHGKVPVSKVTSMKRLSSKAWDKLLSKYGGGPTLSHEDCCWD 606
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
CLIDGA VV AD+YRD+R+SLK LA D+L G +G YYVS+ WLQQW +RK +D PSE
Sbjct: 607 CLIDGAQNVVSADTYRDQRESLKRLARDILDGNCEDGMYYVSRPWLQQWWKRKVVDVPSE 666
Query: 361 ADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSE 420
AD GPT +I CPH QLMPE+A GAKRLLVPE WLF+Y+DA+ VK DD LGC TFPLDS
Sbjct: 667 ADAGPTAAICCPHEQLMPEQAVGAKRLLVPEDFWLFLYKDAISVKADDPLGCPTFPLDSR 726
Query: 421 ECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRN 480
EC +CSD LSE ACLEDS+R K +RQNHEKL +GKS+PL+L+CKY+L+PS+W++KWRN
Sbjct: 727 ECSQCSDELSEEACLEDSLRLVKQMQRQNHEKLFVGKSMPLTLNCKYFLVPSSWISKWRN 786
Query: 481 YISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVT 540
YI+ + K +S +PE LDGVIDSL CEKH L+ER P+LV RG+I + S+ GLTI++
Sbjct: 787 YINLAVK--TSDKPETLDGVIDSLICEKHSGLIERLPELVITRGAIIPRESSVSGLTIIS 844
Query: 541 ENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQ 600
E+DWK FCEEW GI+ KG+S ++ N++ N GSC+E+ + E+ D+ NNE +
Sbjct: 845 ESDWKCFCEEWSGIETKGVSARIENVNDSENAFTGSCREMPICEDQLNTWDKVNNESRNG 904
Query: 601 RPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDR 660
+ V++T PE+CE CIGE+ESCELMQKL+YC++DISV LVRG+E PRSIL+AS+ E DR
Sbjct: 905 QIVIKTCPEVCESCIGEKESCELMQKLSYCNQDISVILVRGREVPRSILQASKGFVETDR 964
Query: 661 RASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRII--DQECAT 716
R SKRSRKT+ S ++LKVSASTSIYQLKMMIWES GVVKENQIL KG R I D E AT
Sbjct: 965 RVSKRSRKTKNESSISLKVSASTSIYQLKMMIWESFGVVKENQILQKGDRTIDLDNEYAT 1024
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQ 771
L D+NIF GD++ V+DSEIHE+RDIADEL D++M Q +E GFRGTLLTSN SQ
Sbjct: 1025 LVDVNIFAGDQIIVRDSEIHENRDIADELCDEEMETQRIEAGFRGTLLTSNGLSQ 1079
>gi|6561960|emb|CAB62464.1| putative protein [Arabidopsis thaliana]
Length = 1672
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/776 (56%), Positives = 566/776 (72%), Gaps = 27/776 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKITS F FP L+M RL+E SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG W
Sbjct: 918 KKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLW 977
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSE 119
WEFDDEHVS LG P E SSS+ P SE A+ ++ + SS+
Sbjct: 978 WEFDDEHVSELGKRPCNEASSST-------------PQSESNGTASSGNITDGIQSGSSD 1024
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ E F+S+DAYMLMY+LR DK++++ + ++ + E + + +LP HL
Sbjct: 1025 CRSAIKSEVFSSSDAYMLMYSLRCDKQENQEGQKENPIDITKGEVKQLKGG---YLPKHL 1081
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ I +N +L+ C+Q+ LRK +EL+ ++ER+QEVR++LSEA V SLEE ++WIS+DWL
Sbjct: 1082 SEWINNMNAVFLESCKQYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWL 1141
Query: 240 RQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
R WAD P LDNT + C HGKV SK+ MKRIS AW K K+NGGP L DYC
Sbjct: 1142 RLWADTTLPPALDNTPLLCSHGKVHASKVNCMKRISELAWIKLESKFNGGPKLGKGDYCR 1201
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
CL+DGA VV +DSYRDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+
Sbjct: 1202 DCLMDGARMVVSSDSYRDRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPT 1261
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
EAD GPT +I C HG+LMPE+A GAKR++VPE W F++EDA+KV +D L C+ FP+DS
Sbjct: 1262 EADAGPTNAITCNHGELMPEQAPGAKRVVVPENFWSFLFEDALKVMSEDTLDCTCFPVDS 1321
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+C C++ LSEVAC EDS+R K+K+RQNHEKLA GK IPL+ +Y+LLPS WL +WR
Sbjct: 1322 SQCCHCTEVLSEVACFEDSLRTLKVKQRQNHEKLATGKGIPLTPQSRYFLLPSPWLVQWR 1381
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN+SS EPE LDGVI++LKC+KH RLLER P+LVC+RGS +QK +TD LTI
Sbjct: 1382 IYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKLTI 1441
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+ E DWK+FC+EWGG+ E G+S ++ GN S +++ E+ P D N +++
Sbjct: 1442 IPELDWKYFCDEWGGLMENGISAFIE----VGNTDQSSSPDVIDLEKDSSPDD--NMDVD 1495
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q+ ++R PEICE+CIGERESCELMQKL+Y + D+ V VRGKEAP+++LEAS+S FE
Sbjct: 1496 AQQLILRASPEICEECIGERESCELMQKLSYSEGDVFVCFVRGKEAPKAMLEASDSSFEV 1555
Query: 659 DRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECAT 716
DRR SKRSR+T + +LKVSA+T++YQLKMMIWE LGV+KENQ LHKG ++IDQE AT
Sbjct: 1556 DRRTSKRSRRTNYGNLTSLKVSATTTVYQLKMMIWELLGVMKENQELHKGSKVIDQESAT 1615
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
LAD+NIFPGD+LWV+D+E+HEHRDIADEL ++K Q +EEGFRGTLLT N+SS+
Sbjct: 1616 LADMNIFPGDRLWVRDTEMHEHRDIADELCEKKPGAQDIEEGFRGTLLTGNISSEA 1671
>gi|18408899|ref|NP_566922.1| ubiquitin-specific protease 26 [Arabidopsis thaliana]
gi|332278236|sp|Q9SCJ9.3|UBP26_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 26; AltName:
Full=Deubiquitinating enzyme 26; Short=AtUBP26; AltName:
Full=Ubiquitin thioesterase 26; AltName:
Full=Ubiquitin-specific-processing protease 26
gi|332645043|gb|AEE78564.1| ubiquitin-specific protease 26 [Arabidopsis thaliana]
Length = 1067
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/776 (56%), Positives = 566/776 (72%), Gaps = 27/776 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKITS F FP L+M RL+E SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG W
Sbjct: 313 KKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSE 119
WEFDDEHVS LG P E SSS+ P SE A+ ++ + SS+
Sbjct: 373 WEFDDEHVSELGKRPCNEASSST-------------PQSESNGTASSGNITDGIQSGSSD 419
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ E F+S+DAYMLMY+LR DK++++ + ++ + E + + +LP HL
Sbjct: 420 CRSAIKSEVFSSSDAYMLMYSLRCDKQENQEGQKENPIDITKGEVKQL---KGGYLPKHL 476
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ I +N +L+ C+Q+ LRK +EL+ ++ER+QEVR++LSEA V SLEE ++WIS+DWL
Sbjct: 477 SEWINNMNAVFLESCKQYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWL 536
Query: 240 RQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
R WAD P LDNT + C HGKV SK+ MKRIS AW K K+NGGP L DYC
Sbjct: 537 RLWADTTLPPALDNTPLLCSHGKVHASKVNCMKRISELAWIKLESKFNGGPKLGKGDYCR 596
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
CL+DGA VV +DSYRDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+
Sbjct: 597 DCLMDGARMVVSSDSYRDRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPT 656
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
EAD GPT +I C HG+LMPE+A GAKR++VPE W F++EDA+KV +D L C+ FP+DS
Sbjct: 657 EADAGPTNAITCNHGELMPEQAPGAKRVVVPENFWSFLFEDALKVMSEDTLDCTCFPVDS 716
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+C C++ LSEVAC EDS+R K+K+RQNHEKLA GK IPL+ +Y+LLPS WL +WR
Sbjct: 717 SQCCHCTEVLSEVACFEDSLRTLKVKQRQNHEKLATGKGIPLTPQSRYFLLPSPWLVQWR 776
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN+SS EPE LDGVI++LKC+KH RLLER P+LVC+RGS +QK +TD LTI
Sbjct: 777 IYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKLTI 836
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+ E DWK+FC+EWGG+ E G+S ++ GN S +++ E+ P D N +++
Sbjct: 837 IPELDWKYFCDEWGGLMENGISAFIE----VGNTDQSSSPDVIDLEKDSSPDD--NMDVD 890
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q+ ++R PEICE+CIGERESCELMQKL+Y + D+ V VRGKEAP+++LEAS+S FE
Sbjct: 891 AQQLILRASPEICEECIGERESCELMQKLSYSEGDVFVCFVRGKEAPKAMLEASDSSFEV 950
Query: 659 DRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECAT 716
DRR SKRSR+T + +LKVSA+T++YQLKMMIWE LGV+KENQ LHKG ++IDQE AT
Sbjct: 951 DRRTSKRSRRTNYGNLTSLKVSATTTVYQLKMMIWELLGVMKENQELHKGSKVIDQESAT 1010
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
LAD+NIFPGD+LWV+D+E+HEHRDIADEL ++K Q +EEGFRGTLLT N+SS+
Sbjct: 1011 LADMNIFPGDRLWVRDTEMHEHRDIADELCEKKPGAQDIEEGFRGTLLTGNISSEA 1066
>gi|11993492|gb|AAG42764.1|AF302674_1 ubiquitin-specific protease 26 [Arabidopsis thaliana]
Length = 1067
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/776 (55%), Positives = 564/776 (72%), Gaps = 27/776 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKITS F FP L+M RL+E SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG W
Sbjct: 313 KKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSE 119
WEFDDEHVS LG P E SSS+ P SE A+ ++ + SS+
Sbjct: 373 WEFDDEHVSELGKRPCNEASSST-------------PQSESNGTASSGNITDGIQSGSSD 419
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ E F+S+DAYMLMY+LR DK++++ + ++ + E + + +LP HL
Sbjct: 420 CRSAIKSEVFSSSDAYMLMYSLRCDKQENQEGQKENPIDITKGEVKQL---KGGYLPKHL 476
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ I +N +L+ C+Q+ LRK +EL+ ++ER+QEVR++LSEA V SLEE ++WIS+DWL
Sbjct: 477 SEWINNMNAVFLESCKQYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWL 536
Query: 240 RQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
R WAD P LDNT + C HGKV SK+ MKRIS AW K K+NGGP L DYC
Sbjct: 537 RLWADTTLPPALDNTPLLCSHGKVHASKVNCMKRISELAWIKLESKFNGGPKLGKGDYCR 596
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
CL+DGA VV +DSYRDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+
Sbjct: 597 DCLMDGARMVVSSDSYRDRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPT 656
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
EAD GPT +I C HG+LMPE+A GAKR++VPE W F++EDA+KV +D L C+ FP+DS
Sbjct: 657 EADAGPTNAITCNHGELMPEQAPGAKRVVVPENFWSFLFEDALKVMSEDTLDCTCFPVDS 716
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+C C++ LSEVAC EDS+R K+K+RQNHEKLA GK IPL+ +Y+LLPS WL +WR
Sbjct: 717 SQCCHCTEVLSEVACFEDSLRTLKVKQRQNHEKLATGKGIPLTPQSRYFLLPSPWLVQWR 776
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN+SS EPE LDGVI++LKC+KH RLLER P+LVC+RGS +QK +TD LTI
Sbjct: 777 IYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKLTI 836
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+ E DWK+FC+EWGG+ E G+S ++ GN S +++ E+ P D N +++
Sbjct: 837 IPELDWKYFCDEWGGLMENGISAFIE----VGNTDQSSSPDVIDLEKDSSPDD--NMDVD 890
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q+ ++R PEICE+CIGERESCELMQKL+Y + D+ V VRGK AP+++LEAS+S FE
Sbjct: 891 AQQLILRASPEICEECIGERESCELMQKLSYSEGDVFVCFVRGKGAPKAMLEASDSSFEV 950
Query: 659 DRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECAT 716
DRR SKRSR+T + +LKVSA+T++YQLKMMIWE L V+KENQ LHKG ++IDQE AT
Sbjct: 951 DRRTSKRSRRTNYGNLTSLKVSATTTVYQLKMMIWELLEVMKENQELHKGSKVIDQESAT 1010
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
LAD+NIFPGD+LWV+D+E+HEHRDIADEL ++K Q +EEGFRGTLLT N+SS+
Sbjct: 1011 LADMNIFPGDRLWVRDTEMHEHRDIADELCEKKPGAQDIEEGFRGTLLTGNISSEA 1066
>gi|297819606|ref|XP_002877686.1| ubiquitin-specific protease 26 [Arabidopsis lyrata subsp. lyrata]
gi|297323524|gb|EFH53945.1| ubiquitin-specific protease 26 [Arabidopsis lyrata subsp. lyrata]
Length = 1047
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/759 (57%), Positives = 558/759 (73%), Gaps = 27/759 (3%)
Query: 21 LSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEG 80
L + SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG WWEFDDEHVS LG PF E
Sbjct: 308 LPKSSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSELGKRPFNEA 367
Query: 81 SSSSGSKVVRSEPVVCQPVSE-RVEGANENHVDV-HLPSSEYYNGSNVERFTSNDAYMLM 138
SSS+ P SE ++EN DV SS+ + E F+S+DAYMLM
Sbjct: 368 SSST-------------PQSESNGTASSENITDVIQSGSSDCRSAIKSEVFSSSDAYMLM 414
Query: 139 YNLRRDKEDSK--RKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQ 196
Y+LR DK++++ +K+ D++ +++S +LP HL + I +N +L+ C+Q
Sbjct: 415 YSLRCDKQENQEGQKENPIDISKGKVDSVQQLKGG--YLPLHLYEWINNMNAVFLESCKQ 472
Query: 197 FKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSI 256
+ LRK +EL ++ER+QEVR++LSEA V SLEE ++WIS+DWLR WAD P LDNT +
Sbjct: 473 YDLRKEKELSALTERRQEVRTILSEAAVQSLEEQYFWISTDWLRLWADTTLPPALDNTPL 532
Query: 257 QCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYR 316
C HGKV SK+ MKRIS AW K K+NGGP L DYC CL+DGA VV +DSYR
Sbjct: 533 LCSHGKVLASKVNCMKRISELAWTKLESKFNGGPKLGKADYCRDCLMDGARMVVSSDSYR 592
Query: 317 DRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQL 376
DRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+EAD GPT +I C HG+L
Sbjct: 593 DRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPTEADAGPTNAITCNHGEL 652
Query: 377 MPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLE 436
MPE+A GAKR++VPE W F+ EDA+KV P+D C+ FP+DS +C C++ LSEVACLE
Sbjct: 653 MPEQAPGAKRIVVPENFWSFLVEDALKVMPEDASDCTCFPVDSSQCCHCTEELSEVACLE 712
Query: 437 DSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSI-EPE 495
DS+R K+K+RQNHEKLA GK+IPL+ +Y+LLPS WL +WR YI+ +GKN+SS EPE
Sbjct: 713 DSLRTLKVKQRQNHEKLATGKNIPLTPQSRYFLLPSPWLVQWRIYINMTGKNSSSAPEPE 772
Query: 496 ILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIK 555
LDGVI++LKC+KH RLLER P+LVC+RG +QK +TD LTI+ E DWK+FCEEWGG+
Sbjct: 773 RLDGVINTLKCKKHTRLLERLPELVCRRGLYFQKNPSTDKLTIIPEIDWKYFCEEWGGLM 832
Query: 556 EKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDCI 615
E G+S +++ NN S +I+ E+ P D N E+++Q+ ++R PEICE+CI
Sbjct: 833 ENGISALIEVGNNTDQ---SSSPDIIDLEKHSSPDD--NMEVDAQQLILRASPEICEECI 887
Query: 616 GERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTR--SFV 673
GERESCELMQKL+Y + D+ V LVRGKEAP+++LEAS+S FE DRR SKRSR+T +
Sbjct: 888 GERESCELMQKLSYSEGDVFVCLVRGKEAPKAMLEASDSSFEVDRRTSKRSRRTNYGNLT 947
Query: 674 NLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNIFPGDKLWVQDS 733
+LKVSA+T++YQLKMMIWE LGV+KENQ LHKG ++IDQE ATLAD+NIFPGDKLWV+D+
Sbjct: 948 SLKVSATTTVYQLKMMIWELLGVMKENQELHKGTKVIDQESATLADMNIFPGDKLWVRDT 1007
Query: 734 EIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
E+HEHRDIADEL D+K Q +EEGFRGTLLT N+SS+
Sbjct: 1008 EMHEHRDIADELCDKKTGAQDIEEGFRGTLLTGNISSEA 1046
>gi|414885082|tpg|DAA61096.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
gi|414885083|tpg|DAA61097.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 1075
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/777 (53%), Positives = 545/777 (70%), Gaps = 30/777 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L++ +RLSEPS Y LSA+LIHKGT NSGHY+A IKDE+ GQW
Sbjct: 315 KKKISSTFSFPGQLDLGKRLSEPSS-SCTYALSAILIHKGTGANSGHYVAHIKDESNGQW 373
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDE VS LG HPFGE + +K + Q S N N+ H +
Sbjct: 374 WEFDDETVSKLGLHPFGEKPGKASNK----DDQKSQNTSTEGSVTNNNNNGHHEAAPSST 429
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
G E F+S DAYMLMY K + DVN E ++++ N+D+ LP HL
Sbjct: 430 MG---EMFSSTDAYMLMY-----------KCITKDVNPTE-SNKIVEINNDL-LPHHLLD 473
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I ELN SY C +++ +K+ L I+ER+QEV+S+L+EAP ++ ++WIS+DWLRQ
Sbjct: 474 EINELNASYTKLCVEYQSKKDSHLAYITERRQEVKSVLTEAPAGPGDDSYFWISTDWLRQ 533
Query: 242 WADKIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
WAD I P S++DN +IQC HGKVP SK+ SMKR+SS AW K KY GGP L +DD+CM
Sbjct: 534 WADNITPPSSIDNGAIQCEHGKVPASKVTSMKRLSSVAWQKLHSKYGGGPILNSDDFCME 593
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWTRRKNLDAPS 359
CL DGA + V AD YR+RR SLK LA+ L+G +G +Y++SK+WL W RRKN D PS
Sbjct: 594 CLKDGAKSAVSADVYRERRASLKTLAEAALAGNCPDGPSYFISKTWLTHWLRRKNADIPS 653
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
+ D GPT+++RC HG +PE A GAKR+ VPEILWLF+Y+ + K DD + TFP DS
Sbjct: 654 DGDNGPTSALRCCHGDFLPEHAPGAKRVSVPEILWLFLYQTVHEKKADDTV---TFPSDS 710
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
C CS LS+VA +E ++RA KLK+RQNHEKL GKS L KYYL+PS+WL++WR
Sbjct: 711 HPCETCSRELSDVASVEVNLRAVKLKQRQNHEKLISGKSFALHPGQKYYLVPSSWLSEWR 770
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN SS+ EP+ L+ V SL CEKH RLL+RP DLV KRGSI QK S TDGLTI
Sbjct: 771 AYITATGKNISSLPEPQTLEAVARSLICEKHSRLLQRPLDLVLKRGSIIQKASNTDGLTI 830
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPR-DEENNEI 597
+ E DWK F EEW KG+S + FS ++ ++L GS + + +++ G D+ N+++
Sbjct: 831 IPEYDWKLFSEEWSATPGKGISAEIAFSKSSQDKLHGSSEAVPITDGNLGQSLDDTNDDL 890
Query: 598 ESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFE 657
++ P +RT PE+CE+CIGERESC L++KLNY ++DI V+ V GKEAP+SI EAS+++
Sbjct: 891 GAREPYIRTDPEVCEECIGERESCALVEKLNYQNEDIHVYFVHGKEAPKSIKEASKAVTV 950
Query: 658 PDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECA 715
PDRR SKRSR+T + ++LKVS STS+YQLK+MIWESLG+VKENQ+LHKG I+ + A
Sbjct: 951 PDRRTSKRSRRTSSGNSISLKVSGSTSVYQLKLMIWESLGIVKENQMLHKGSVEIEDDFA 1010
Query: 716 TLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
TLAD +IFPGD LWV+DSEI+E+RDIADE+S+QK ++ EEGFRGTLLTS +S+Q+
Sbjct: 1011 TLADKSIFPGDFLWVRDSEIYENRDIADEISEQKDDMLQAEEGFRGTLLTSTVSAQL 1067
>gi|357114488|ref|XP_003559032.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like
[Brachypodium distachyon]
Length = 1074
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/777 (53%), Positives = 532/777 (68%), Gaps = 31/777 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FP +L+M +RLS PS YDL+A+LIHKG+A NSGHY+A IKDE++ QW
Sbjct: 315 KKKISSAFSFPAQLDMGKRLSNPSS-SYTYDLAAILIHKGSAANSGHYVAHIKDESSCQW 373
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDE VS LG HPFGE S S KV + V S AN N H
Sbjct: 374 WEFDDECVSKLGFHPFGEKPSKSSDKVDQKSEVT----SSEGSVANGNKSSYHEAKPSCT 429
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
G F+S DAYMLMY E+ + + + NN LP H
Sbjct: 430 MGP---MFSSTDAYMLMYKRSSKDENGTESNNIMEANNSS-------------LPRHFAD 473
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I ELN Y+ CE+++ +K++ L I ER+ EVR++L+EAP P ++ ++WIS+DWLRQ
Sbjct: 474 EINELNALYVKECEEYESKKDKLLASIQERRDEVRAVLTEAPAPPDDDSYFWISADWLRQ 533
Query: 242 WADKIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
WAD P S++DN+ IQC HGKVP SK+ SMKR+S+KAW K KY GGP L+ +D CM
Sbjct: 534 WADNANPPSSIDNSPIQCEHGKVPASKVTSMKRLSAKAWQKLLSKYGGGPVLSRNDVCME 593
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWTRRKNLDAPS 359
CL DGA T V AD YRDR+ SLK LA+ L+G + EG +Y+VSK+WL W RRKN D PS
Sbjct: 594 CLKDGAKTAVSADVYRDRKASLKNLAEAALAGIIPEGPSYFVSKTWLTHWLRRKNADIPS 653
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
+ D PT+++RC HG L+PE A GAKR+ VPE LWLF+YE + D++ +TFP D
Sbjct: 654 DPDNVPTSALRCSHGDLLPEHAPGAKRVSVPESLWLFLYETVNAREADNI---ATFPSDC 710
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+ C C + LS VA +ED++RA KLK+RQ HEKL GK L KYYL+PS+WL++WR
Sbjct: 711 QPCEICGEKLSVVASVEDNLRAIKLKQRQRHEKLISGKGFALHPGQKYYLVPSSWLSEWR 770
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN SS+ EP+ L+ VI+SLKCEKH RLL+RP DLVCKRG+I QK S TDGL I
Sbjct: 771 TYITATGKNVSSLPEPQSLEVVINSLKCEKHSRLLQRPLDLVCKRGNITQKTSNTDGLAI 830
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKE-ILLSEEPCGPRDEENNEI 597
++E+DW F EEW G S + SN++ ++L GS + I+L E+P ++ NN +
Sbjct: 831 ISESDWILFSEEWNITHGNGASAEIICSNSSQDKLHGSSEAMIILDEDPDQSINDANNSL 890
Query: 598 ESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFE 657
E P +RT PE+CE+CIGE ESC L+QKLNY ++DI V+LVRGKEAP+SI EA ++
Sbjct: 891 EDSSPYIRTDPEVCEECIGEIESCALVQKLNYQNEDIHVYLVRGKEAPKSIREACPALPI 950
Query: 658 PDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECA 715
PDRR +KRSR+T + +NLKVS STS+YQLK+MIWESLG+VKENQ LHKG I+ + A
Sbjct: 951 PDRRTTKRSRRTTSGNSINLKVSGSTSVYQLKLMIWESLGIVKENQKLHKGSVEIEDDLA 1010
Query: 716 TLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
TLAD IFPGD LWV+DSE+ E+RDIADE+S+QK +V EEGFRGTLLTS++S+Q+
Sbjct: 1011 TLADKAIFPGDVLWVKDSEMFENRDIADEISEQKADVS-AEEGFRGTLLTSSVSTQL 1066
>gi|414865457|tpg|DAA44014.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 1073
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/780 (51%), Positives = 533/780 (68%), Gaps = 38/780 (4%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS P+ Y+L+A+LIHKGTA NSGHY+A IKDE+ GQW
Sbjct: 315 KKKISSSFSFPGQLDMGKRLSNPTS-SYTYELAAILIHKGTAANSGHYVAHIKDESNGQW 373
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDE VS LG HPFGE + +K R +P +EG+ N+ + H ++
Sbjct: 374 WEFDDETVSKLGLHPFGENLGKTSNKDDR------KPQGISIEGSVTNNNNGHQEAAS-- 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ S E F+S DAYMLMY ++ + + + NN LP H
Sbjct: 426 SSSPGEMFSSTDAYMLMYKCTNKDGNATESNKIMEFNNS-------------LLPHHFLD 472
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N S + CE+++ +K L I+ER+QEV+S+L EAP + ++WIS+DWLRQ
Sbjct: 473 EINEQNASCMKSCEEYQSKKGSHLAYITERRQEVKSILIEAPANPEDNSYFWISTDWLRQ 532
Query: 242 WADKIFPS-TLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
WAD I P ++DN IQC HGKVP SK+ SMKR+S+ AW K F KY GGP L+ DD+CM
Sbjct: 533 WADNITPPLSIDNGPIQCEHGKVPVSKLTSMKRLSAAAWQKLFSKYGGGPTLSGDDFCMV 592
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWTRRKNLDAPS 359
CL DGA V AD YRDR++S K LA+ L+G + +Y++SK+WL W RRKN S
Sbjct: 593 CLKDGAKNAVSADVYRDRKESFKNLAEAALAGSCSDSPSYFISKAWLTHWLRRKNAGILS 652
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
+AD GPT+++RC HG L+PE A GAKR+ VPE LWLF+Y+ + K DD++ TFP D
Sbjct: 653 DADNGPTSALRCRHGYLLPEHAPGAKRVSVPESLWLFLYQ-TISEKVDDVV---TFPSDC 708
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+ C CS LS+VA +E ++RA KL++R HEKL GKS L KYYL+PS+WL++WR
Sbjct: 709 QPCKICSQELSDVASVEGNLRAVKLEQRYKHEKLISGKSFALRPGEKYYLVPSSWLSEWR 768
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN SS+ EP+ L+ V+ SL CEKH RLL++P DLVCKRGSI QK S DGLTI
Sbjct: 769 AYITTTGKNISSLPEPQSLEAVVSSLICEKHSRLLQKPLDLVCKRGSITQKTSNNDGLTI 828
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEE----N 594
+ E DWK F EEW KG+S + FS +A +++ GS + + +++ G D+ N
Sbjct: 829 IPEYDWKLFSEEWSATPGKGISAEIAFSKDAQDKVHGSSEAMPITD---GNLDQSLYGAN 885
Query: 595 NEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASES 654
++ ++ P VRT PE+CE+C+GERESC L+QKLNY ++DI V+ VRGK P+SI EAS+
Sbjct: 886 DDFGAREPYVRTDPEVCEECVGERESCALVQKLNYQNEDIHVYFVRGKAPPKSIKEASKD 945
Query: 655 MFEPDRRASKRSRKTRS--FVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQ 712
+ DRR SKRSR+T S ++LKVS STS+YQLK+MIWESLG+VKENQ LHKG I+
Sbjct: 946 VPVSDRRISKRSRRTSSGNSISLKVSGSTSVYQLKLMIWESLGIVKENQKLHKGNVEIEG 1005
Query: 713 ECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
+ ATLAD +IFPGD LWV+DSEI E+RDIADE+S+QK ++ VEEGFRGTLLTS++S+Q+
Sbjct: 1006 DLATLADKSIFPGDVLWVRDSEIFENRDIADEISEQKGDILQVEEGFRGTLLTSSVSAQL 1065
>gi|152112340|sp|A3AF13.2|UBP26_ORYSJ RecName: Full=Ubiquitin carboxyl-terminal hydrolase 26; AltName:
Full=Deubiquitinating enzyme 26; AltName: Full=Ubiquitin
thioesterase 26; AltName:
Full=Ubiquitin-specific-processing protease 26
gi|222624351|gb|EEE58483.1| hypothetical protein OsJ_09742 [Oryza sativa Japonica Group]
Length = 1079
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/786 (52%), Positives = 543/786 (69%), Gaps = 43/786 (5%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS PS Y LSA+LIHKG+A NSGHY+A +KDE+ GQW
Sbjct: 314 KKKISSAFSFPGQLDMGKRLSNPSS-SYTYGLSAILIHKGSAANSGHYVAHVKDESNGQW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDEHVS LG HPFGE S K + Q S N+++ H + +
Sbjct: 373 WEFDDEHVSKLGLHPFGEKPGKSSDKTDQKP----QGSSTADSVTNDDNNSCHEAA---F 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ E F+S DAYMLMY K + D N +E + + LP H
Sbjct: 426 TSTMEEMFSSTDAYMLMY-----------KRIAKDENGIESNNISSNNS----LPHHFVD 470
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N SY+ CE+++ +K+ L I+ER+QEV+S+L+EAP E+ ++WIS+DWLRQ
Sbjct: 471 EIDERNTSYVKECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQ 530
Query: 242 WADKIFP-----------STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP 290
WAD + P S++DN+ IQC HGKVP SK+ SMKR+S+ AW+K F KY GGP
Sbjct: 531 WADNVNPPSPIITGVRVHSSIDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGP 590
Query: 291 ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQW 349
L++DD+CM CL DGA V AD YRDR+ SL+ +A+ L+G +G Y+VS+ WL QW
Sbjct: 591 TLSSDDFCMECLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQW 650
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD+
Sbjct: 651 LRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDI 709
Query: 410 LGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYL 469
+ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL
Sbjct: 710 V---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYL 766
Query: 470 LPSTWLTKWRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQ 528
+PS+WL++WR YI+ +GKN SS+ EP+ L+ I+SL CEKH RLL+RP DLVCKRG+I Q
Sbjct: 767 VPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQ 826
Query: 529 KGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCG 588
K S TDGLT+++E+DW F EEW KGL + FS ++ + L S +L E+
Sbjct: 827 KASNTDGLTMISESDWILFSEEWNVAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQ 886
Query: 589 PRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSI 648
++ +N++ + P VRT PE+CE+CIGE+ESC L++KLNY ++DI V+LVRGKEAP+SI
Sbjct: 887 STNDLSNDLGGREPYVRTDPEVCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSI 946
Query: 649 LEASESMFEPDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKG 706
EAS ++ PDRR SKRSR+T + ++LKVS ST++YQLK+MIWESLG+VKENQ LHKG
Sbjct: 947 REASAAVPVPDRRTSKRSRRTTSGNSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKG 1006
Query: 707 QRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTS 766
I+ + ATLAD IFPGD LWV+DSEI+E+RDIADE+S+QK+ VQ EEGFRGTLLTS
Sbjct: 1007 SVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQ-TEEGFRGTLLTS 1065
Query: 767 NLSSQV 772
+ S+Q+
Sbjct: 1066 SASAQL 1071
>gi|152112339|sp|A2XDG4.1|UBP26_ORYSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 26; AltName:
Full=Deubiquitinating enzyme 26; AltName: Full=Ubiquitin
thioesterase 26; AltName:
Full=Ubiquitin-specific-processing protease 26
gi|125542735|gb|EAY88874.1| hypothetical protein OsI_10351 [Oryza sativa Indica Group]
Length = 1079
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/786 (52%), Positives = 544/786 (69%), Gaps = 43/786 (5%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS PS Y LSA+LIHKG+A NSGHY+A +KDE+ GQW
Sbjct: 314 KKKISSAFSFPGQLDMGKRLSNPSS-SYTYGLSAILIHKGSAANSGHYVAHVKDESNGQW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDEHVS LG HPFGE S +K + Q S N+++ H + +
Sbjct: 373 WEFDDEHVSKLGLHPFGEKPGKSSNKTDQKP----QGSSTADSVTNDDNNSCHEAA---F 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ E F+S DAYMLMY K + D N +E + + LP H
Sbjct: 426 TSTMEEMFSSTDAYMLMY-----------KRIAKDENGIESNNISSNNS----LPHHFVD 470
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N SY+ CE+++ +K+ L I+ER+QEV+S+L+EAP E+ ++WIS+DWLRQ
Sbjct: 471 EIDERNTSYVKECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQ 530
Query: 242 WADKIFP-----------STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP 290
WAD + P S++DN+ IQC HGKVP SK+ SMKR+S+ AW+K F KY GGP
Sbjct: 531 WADNVNPPSPIITGVRVHSSIDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGP 590
Query: 291 ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQW 349
L++DD+CM CL DGA V AD YRDR+ SL+ +A+ L+G +G Y+VS+ WL QW
Sbjct: 591 TLSSDDFCMECLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQW 650
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD+
Sbjct: 651 LRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDI 709
Query: 410 LGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYL 469
+ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL
Sbjct: 710 V---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYL 766
Query: 470 LPSTWLTKWRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQ 528
+PS+WL++WR YI+ +GKN SS+ EP+ L+ I+SL CEKH RLL+RP DLVCKRG+I Q
Sbjct: 767 VPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQ 826
Query: 529 KGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCG 588
K S TDGLT+++E+DW F EEW KGL + FS ++ + L S +L E+
Sbjct: 827 KASNTDGLTMISESDWILFSEEWNVAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQ 886
Query: 589 PRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSI 648
++ +N++ + P VRT PE+CE+CIGE+ESC L++KLNY ++DI V+LVRGKEAP+SI
Sbjct: 887 STNDLSNDLGGREPYVRTDPEVCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSI 946
Query: 649 LEASESMFEPDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKG 706
EAS ++ PDRR SKRSR+T + ++LKVS ST++YQLK+MIWESLG+VKENQ LHKG
Sbjct: 947 REASAAVPVPDRRTSKRSRRTTSGNSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKG 1006
Query: 707 QRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTS 766
I+ + ATLAD IFPGD LWV+DSEI+E+RDIADE+S+QK+ VQ EEGFRGTLLTS
Sbjct: 1007 SVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQ-TEEGFRGTLLTS 1065
Query: 767 NLSSQV 772
+ S+Q+
Sbjct: 1066 SASAQL 1071
>gi|449499384|ref|XP_004160801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Cucumis
sativus]
Length = 925
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/606 (60%), Positives = 449/606 (74%), Gaps = 6/606 (0%)
Query: 7 SPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
S FPG L+M+ RLSE SQ + IYDLSAVLIHKGTAVNSGHYIA IKDENTGQWWEFDD
Sbjct: 320 SALSFPGVLDMRERLSESSQSESIYDLSAVLIHKGTAVNSGHYIAHIKDENTGQWWEFDD 379
Query: 67 EHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSEYYNGS 124
EHVS LGHHPFGE SS++ SK V++E V E V E + V S+E
Sbjct: 380 EHVSKLGHHPFGEKSSNTNSKSVKTELAVPLGSKEEVNATAEGNPTNGVLQQSTESGVRC 439
Query: 125 NVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIK 184
+ F+SNDAYMLMYNLR + + R VN E+E M+ F D +FLPSHL +I
Sbjct: 440 PTDVFSSNDAYMLMYNLRCTGKATNRVTSCI-VNGKEVEGNMVPFQDGLFLPSHLCDEIS 498
Query: 185 ELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWAD 244
LN S++ C++++ +K EL CI+ R+QEVRS+LSEAPV SLEEPF WIS+DWLRQWAD
Sbjct: 499 SLNESHVIACQEYESKKEVELGCINNRRQEVRSILSEAPVHSLEEPFCWISTDWLRQWAD 558
Query: 245 KIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLID 304
K+ P LDN+ IQCLHGKVP SK+ S+KR+S KAW+K KY GG LTN+D CM CLI
Sbjct: 559 KVSPPILDNSQIQCLHGKVPISKVTSIKRLSVKAWDKLSSKYGGGSKLTNEDICMECLIA 618
Query: 305 GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGG 364
GA VVCADSYRDRR S+K +A LSG GTY VS++WLQQW +RK LDAPSEAD
Sbjct: 619 GARNVVCADSYRDRRISMKEIALSALSGNYPNGTYVVSRTWLQQWVKRKILDAPSEADAE 678
Query: 365 PTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPE 424
PT SI+CPHGQL+PE+A GAKR+L+PE LWLFIYEDA+ VKPDD G TFP DS +C
Sbjct: 679 PTASIKCPHGQLLPEQAAGAKRVLIPEDLWLFIYEDALTVKPDDPTGVPTFPSDSRQCSL 738
Query: 425 CSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISP 484
CS+ LSEVA +EDSIR KLK+RQNHE+LA+GK IPLSL+CKYYL+P++WL+KWRNYI+
Sbjct: 739 CSEELSEVAVMEDSIRGVKLKQRQNHERLAVGKFIPLSLNCKYYLVPTSWLSKWRNYINA 798
Query: 485 SGKNASSIE-PEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTEND 543
SGK+AS +E PE LDGVI+ L+CEKH RLLERPPDL+CKR ++ QK SA D LTI++END
Sbjct: 799 SGKSASFVEKPENLDGVINLLRCEKHSRLLERPPDLICKRATMQQK-SAADVLTIISEND 857
Query: 544 WKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPV 603
WK FCEEW G + G+S +V+ S+ GN++ GS KE ++EE DE NN + ++ +
Sbjct: 858 WKSFCEEWEGSEACGISAVVESSSCVGNDIDGSSKEKTMAEEDLCSNDEVNNG-DFKQIL 916
Query: 604 VRTFPE 609
++T PE
Sbjct: 917 LKTDPE 922
>gi|297792133|ref|XP_002863951.1| hypothetical protein ARALYDRAFT_917859 [Arabidopsis lyrata subsp.
lyrata]
gi|297309786|gb|EFH40210.1| hypothetical protein ARALYDRAFT_917859 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/614 (52%), Positives = 421/614 (68%), Gaps = 32/614 (5%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKITS F FP L+M RL+E SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG W
Sbjct: 167 KKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLW 226
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSE-RVEGANENHVDV-HLPSSE 119
WEFDDEHVS LG PF E SSS+ P SE ++EN DV SS+
Sbjct: 227 WEFDDEHVSELGKCPFNEASSST-------------PQSESNGTASSENITDVIQSGSSD 273
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSK--RKDVVHDVNNMEIESEMIFFNDDIFLPS 177
+ E F+S+DAYMLMY+LR DK++++ +K+ D++ +++S +LP
Sbjct: 274 CRSAIKSEVFSSSDAYMLMYSLRCDKQENQEGQKENPIDISKGKVDSLQQLKGG--YLPL 331
Query: 178 HLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSD 237
HL + I +N +L+ C+Q+ LRK +EL ++ER+QEVR++LSEA V SLEE ++WIS+D
Sbjct: 332 HLYEWINNMNAVFLESCKQYDLRKEKELSALTERRQEVRTILSEAAVQSLEEQYFWISTD 391
Query: 238 WLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDY 297
WLR WAD P LDNT + C HGKV SK+ MK IS AW K K A
Sbjct: 392 WLRLWADTTLPPALDNTPLLCSHGKVLASKVNCMKLISELAWTKLESKEKRTTA------ 445
Query: 298 CMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDA 357
T L DGA VV +DSYRDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDA
Sbjct: 446 -GTALWDGARMVVSSDSYRDRRTFMKSVANDVLSGKCEDGMYYISRAWLQQWIKRKNLDA 504
Query: 358 PSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPL 417
P+EAD GPT +I C HG+LMPE+A GAKR++VPE W F+ EDA+KV P+D C+ FP+
Sbjct: 505 PTEADAGPTNAITCNHGELMPEQAPGAKRIVVPENFWSFLVEDALKVMPEDASDCTCFPV 564
Query: 418 DSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTK 477
DS +C C++ LSEVACLEDS+R K+K+RQNHEKLA GK+IP + +Y+LLPS WL +
Sbjct: 565 DSSQCCHCTEELSEVACLEDSLRTLKVKQRQNHEKLATGKNIPFTPQSRYFLLPSPWLVQ 624
Query: 478 WRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGL 536
WR YI+ +GKN+SS EPE LDGVI++LKC+KH RLLER P+LVC+RGS +QK +TD L
Sbjct: 625 WRIYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKL 684
Query: 537 TIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNE 596
TI+ E DWK+FCEEWGG+ E G+S +++ NN S +I+ E+ P D N E
Sbjct: 685 TIIPEIDWKYFCEEWGGLMENGISALIEVGNNTDQ---SSSPDIIDLEKHSSPDD--NME 739
Query: 597 IESQRPVVRTFPEI 610
+++Q+ ++R PE+
Sbjct: 740 VDAQQLILRASPEV 753
>gi|168004285|ref|XP_001754842.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693946|gb|EDQ80296.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1166
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 335/783 (42%), Positives = 479/783 (61%), Gaps = 41/783 (5%)
Query: 9 FCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
F FP ++M LS + ++ +YDLSA+L+HKG+ NSGHY+A IKD+ T +WW+FDD
Sbjct: 296 FSFPRTIDMGPCLSTYADIESRAVYDLSAILVHKGSMANSGHYVAHIKDDRTSEWWQFDD 355
Query: 67 EHVSNLGHHPFGEGSS-SSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSN 125
E V++LG HP GE +S S+ SK ++ + S V+ ++ +H S
Sbjct: 356 EQVTSLGFHPLGEATSQSAASKDAVTQEAIVSEASGSVDASSRSH-------------SE 402
Query: 126 VERFTSNDAYMLMYNLRRDKEDSKRKD-VVHDVNNMEIESEMIFFNDDIFLPSHLGKDIK 184
E TS DAYMLMY R D E+ K V + + ME+E + +D LP L +I
Sbjct: 403 SEILTSADAYMLMYIRRADAENDKLAVFAVGEPSPMEVEGDR-RIDDCAGLPEQLRLEID 461
Query: 185 ELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWAD 244
++N + C ++ R+ EL I ERK+EVRS+L+ A +LEEPF+WIS++WLR WAD
Sbjct: 462 QMNNDFEAMCSEYTRRREEELTRIGERKEEVRSILALATAKALEEPFFWISTEWLRSWAD 521
Query: 245 KIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLI 303
+ P +++DN+ + C H KV + MKRIS+KAW + Y GGPA++ DDYC+ C+
Sbjct: 522 SLTPPASIDNSPLLCPHQKVSPKSLPVMKRISAKAWKQLEALYKGGPAISGDDYCVECIF 581
Query: 304 DGAHTVVCADSYRDRRKSLKGLADDVLSGK-LVEGTYYVSKSWLQQWTRRKNLDAPSEAD 362
+ A AD+YRD+R ++ + +DVL+G+ L + TY VSK+WLQQW RRK DAPS+AD
Sbjct: 582 EDARAAASADTYRDQRMYMREVIEDVLNGRGLDDKTYLVSKTWLQQWVRRKVADAPSDAD 641
Query: 363 GGPTTSIRCPHGQLMPEKAGGAKRLL-VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEE 421
GPT ++RCPHG L+PE+A A R VP+I+W ++ +A V+ + G FP D
Sbjct: 642 AGPTAALRCPHGGLLPEQAAAAARRQRVPQIVWEYLVHNAELVENSNAEGHQAFPGDQNT 701
Query: 422 CPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNY 481
C +C +++ A ++ +RA K ++R HE L GK + C YYL+P+ WL+KWR Y
Sbjct: 702 CSQCQIEVNKAATKKEGLRATKFEQRAKHEALYGGKPTVIFPGCTYYLVPTVWLSKWRAY 761
Query: 482 ISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLV-CKRGSIYQKGSATDGLTIV 539
+ +GKN ++ EP L+G I SL C+KH +L +PP L +RG I Q+ D T++
Sbjct: 762 LGAAGKNVLAVDEPVGLEGFILSLLCQKHEGMLFKPPSLTRGRRGEIVQRTFNDDVFTVI 821
Query: 540 TENDWKWFCEEWGGIKEKGLSVIVDFSN-----NAGNELVGSCKEILLSEEPCGPRDEEN 594
+E+DW C++W KG+ V+ N N N G + I LS+E D+
Sbjct: 822 SEDDWHNLCQQWEIDAAKGIRAEVELGNLSTDINKNNAFEGEPEIIHLSDE-----DDRG 876
Query: 595 NEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASES 654
+ E+ P++RT PE+C +CI ERE+ E + KLNY +++ISV LVRGKE P S+L + S
Sbjct: 877 IKFENA-PILRTTPEVCRECIEERETHEFLTKLNYTNREISVTLVRGKEPPPSLLLSPGS 935
Query: 655 MFEPDRRASKRSRKTRSFVN----LKVSASTSIYQLKMMIWESLGVVKENQILHKGQRII 710
E +RR SKR+R+ + N L VS T+++QLK+ IWESLGVVK+NQ LH G+ +
Sbjct: 936 --EAERRTSKRARRASATSNGRIQLNVSGDTTVFQLKLQIWESLGVVKDNQKLHIGKEEL 993
Query: 711 DQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGT-LLTSNLS 769
+ ATLADLNI PG LWV D+ HE+RDIA+EL+ +K EEGFRGT LL L
Sbjct: 994 LDDNATLADLNILPGTNLWVMDTGQHENRDIAEELTTEKPGRIETEEGFRGTRLLMGGLP 1053
Query: 770 SQV 772
S V
Sbjct: 1054 SLV 1056
>gi|414885081|tpg|DAA61095.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 920
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/620 (50%), Positives = 409/620 (65%), Gaps = 28/620 (4%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L++ +RLSEPS Y LSA+LIHKGT NSGHY+A IKDE+ GQW
Sbjct: 315 KKKISSTFSFPGQLDLGKRLSEPSS-SCTYALSAILIHKGTGANSGHYVAHIKDESNGQW 373
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDE VS LG HPFGE + +K + Q S N N+ H +
Sbjct: 374 WEFDDETVSKLGLHPFGEKPGKASNK----DDQKSQNTSTEGSVTNNNNNGHHEAAPSST 429
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
G E F+S DAYMLMY K + DVN E ++++ N+D+ LP HL
Sbjct: 430 MG---EMFSSTDAYMLMY-----------KCITKDVNPTE-SNKIVEINNDL-LPHHLLD 473
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I ELN SY C +++ +K+ L I+ER+QEV+S+L+EAP ++ ++WIS+DWLRQ
Sbjct: 474 EINELNASYTKLCVEYQSKKDSHLAYITERRQEVKSVLTEAPAGPGDDSYFWISTDWLRQ 533
Query: 242 WADKIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
WAD I P S++DN +IQC HGKVP SK+ SMKR+SS AW K KY GGP L +DD+CM
Sbjct: 534 WADNITPPSSIDNGAIQCEHGKVPASKVTSMKRLSSVAWQKLHSKYGGGPILNSDDFCME 593
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWTRRKNLDAPS 359
CL DGA + V AD YR+RR SLK LA+ L+G +G +Y++SK+WL W RRKN D PS
Sbjct: 594 CLKDGAKSAVSADVYRERRASLKTLAEAALAGNCPDGPSYFISKTWLTHWLRRKNADIPS 653
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
+ D GPT+++RC HG +PE A GAKR+ VPEILWLF+Y+ + K DD + TFP DS
Sbjct: 654 DGDNGPTSALRCCHGDFLPEHAPGAKRVSVPEILWLFLYQTVHEKKADDTV---TFPSDS 710
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
C CS LS+VA +E ++RA KLK+RQNHEKL GKS L KYYL+PS+WL++WR
Sbjct: 711 HPCETCSRELSDVASVEVNLRAVKLKQRQNHEKLISGKSFALHPGQKYYLVPSSWLSEWR 770
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN SS+ EP+ L+ V SL CEKH RLL+RP DLV KRGSI QK S TDGLTI
Sbjct: 771 AYITATGKNISSLPEPQTLEAVARSLICEKHSRLLQRPLDLVLKRGSIIQKASNTDGLTI 830
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPR-DEENNEI 597
+ E DWK F EEW KG+S + FS ++ ++L GS + + +++ G D+ N+++
Sbjct: 831 IPEYDWKLFSEEWSATPGKGISAEIAFSKSSQDKLHGSSEAVPITDGNLGQSLDDTNDDL 890
Query: 598 ESQRPVVRTFPEICEDCIGE 617
++ P +RT PE IG+
Sbjct: 891 GAREPYIRTDPENHVTFIGQ 910
>gi|302766854|ref|XP_002966847.1| hypothetical protein SELMODRAFT_86822 [Selaginella moellendorffii]
gi|300164838|gb|EFJ31446.1| hypothetical protein SELMODRAFT_86822 [Selaginella moellendorffii]
Length = 1009
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 294/761 (38%), Positives = 419/761 (55%), Gaps = 100/761 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLS---------EPSQLDLIYDLSAVLIHKGTAVNSGHYIAL 52
KKK+TS F FP L+M+RR+S EP+ YDL A+L+HKG +SGHY+
Sbjct: 288 KKKVTSKFMFPKVLDMERRVSPVTSDGSPGEPAH----YDLFAILMHKGNMASSGHYVVH 343
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD 112
I+DE TGQWW+FDDE V+ LG +P GE +S ++V ++++
Sbjct: 344 IRDERTGQWWQFDDEEVTMLGSNPLGEPTSKL----------------DKVSPDRDDNL- 386
Query: 113 VHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD 172
S DAYMLM++ RR ++ V +
Sbjct: 387 ----------------LMSPDAYMLMFS-RRTSTPRVAEEPVRSI--------------- 414
Query: 173 IFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFY 232
P L ++ E N S + CE + L K+ E I ER+ EVR +L+ A P+ + F
Sbjct: 415 ---PEFLKAEVDEQNYSLMSSCEVYNLMKDEEEQRIVERRAEVREVLANAR-PTAPKGF- 469
Query: 233 WISSDWLRQWADKIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPA 291
WIS++WLR W D + P S +DN+ + C H +V I MK IS AW KY G P
Sbjct: 470 WISAEWLRNWTDSLKPPSAIDNSILLCEHERVSPKSIQLMKCISDAAWQSLHSKYGGEPV 529
Query: 292 LTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWT 350
LT + C C+ A A+S+R R ++K +A++V++GK +EG +YVSKSWL QW
Sbjct: 530 LTMESCCFECIYADAGAAATAESFRSGRAAMKLMAENVMAGKGLEGHLFYVSKSWLVQWM 589
Query: 351 RRKN-LDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
R+K LD + D PT++I C H L+P+ A GAKR +VPE+LW + Y++A+ V ++
Sbjct: 590 RKKAALDTLGDGDLNPTSAITCRHNALLPDDAAGAKRQVVPEVLWSYFYQNAVLVGGEEQ 649
Query: 410 LGCSTFPLDSEECPECSDALSEV--ACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKY 467
G FP+++E C C S CL S RA K+++RQ E + G++ L+ Y
Sbjct: 650 RGHKPFPVNTENCKICEAEHSHTLTKCLMLSFRATKMEQRQKQEAIFSGRNPVLNPGDVY 709
Query: 468 YLLPSTWLTKWRNYISPSGKNASSIE-PEILDGVIDSLKCEKHLRLLERPPDLV-CKRGS 525
YL+PS+W++ WR YI SGKN IE P L+ + SL C KH LL PP L +RG
Sbjct: 710 YLVPSSWISLWRAYIGASGKNVLDIEEPVGLERFLSSLLC-KHGGLLYNPPALTRTRRGE 768
Query: 526 IYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEE 585
+ QK S+ D +V+ +DW +FC++W KG+ V EE
Sbjct: 769 LVQKASSDDVQVVVSRDDWVYFCQQWDANAGKGIRAYV--------------------EE 808
Query: 586 PCGPRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAP 645
P E E + PV+RT PE+C +CI +RE+ EL+ KLNY + I+V LV+GKE P
Sbjct: 809 AEMPDRPEKELSELKLPVLRTEPEVCRECIDDRETTELVHKLNYTNATITVDLVQGKEPP 868
Query: 646 RSILEASESMFEPDRRASKRSRKTRSF----VNLKVSASTSIYQLKMMIWESLGVVKENQ 701
S++ A+ + + +RR SKR+R+T + V L VS +T++YQLKM+IWE LGVVKENQ
Sbjct: 869 PSLVFAAANQ-DAERRTSKRARRTVATGNKQVKLTVSGTTTVYQLKMLIWEWLGVVKENQ 927
Query: 702 ILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIA 742
+H G+ + E TLAD+ + P +LWV DS +HEHRDIA
Sbjct: 928 EVHFGKVELTDESTTLADVGVLPNSQLWVSDSGLHEHRDIA 968
>gi|302755474|ref|XP_002961161.1| hypothetical protein SELMODRAFT_75187 [Selaginella moellendorffii]
gi|300172100|gb|EFJ38700.1| hypothetical protein SELMODRAFT_75187 [Selaginella moellendorffii]
Length = 1009
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 292/761 (38%), Positives = 419/761 (55%), Gaps = 100/761 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLS---------EPSQLDLIYDLSAVLIHKGTAVNSGHYIAL 52
KKK+TS F FP L+M+RR+S EP+ YDL A+L+HKG +SGHY+
Sbjct: 288 KKKVTSKFMFPKVLDMERRVSPVTSDGSPGEPAH----YDLFAILMHKGNMASSGHYVVH 343
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD 112
I+DE TGQWW+FDDE V+ LG +P GE +S ++V ++++
Sbjct: 344 IRDERTGQWWQFDDEEVTMLGSNPLGEPTSKL----------------DKVSPDRDDNL- 386
Query: 113 VHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD 172
S DAYMLM++ RR ++ V +
Sbjct: 387 ----------------LMSPDAYMLMFS-RRTSTPRVAEEPVRSI--------------- 414
Query: 173 IFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFY 232
P L ++ E N S + CE + L K+ E I ER+ EVR +L+ A P+ + F
Sbjct: 415 ---PEFLKAEVDEQNYSLMSSCEVYNLMKDEEEQRIVERRAEVREVLANAR-PTAPKGF- 469
Query: 233 WISSDWLRQWADKIFP-STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPA 291
WIS++WLR W D + P S +DN+ + C H +V I MK IS AW KY G P
Sbjct: 470 WISAEWLRNWTDSLKPPSAIDNSILLCEHERVSPKSIQLMKCISDAAWQSLHSKYGGQPV 529
Query: 292 LTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEG-TYYVSKSWLQQWT 350
+T + C C+ A A+S+R R ++K +A++V++GK VEG +YVS+SWL QW
Sbjct: 530 VTMESCCFECIYADAAAAATAESFRSGRAAMKLMAENVMAGKGVEGHLFYVSRSWLVQWM 589
Query: 351 RRKN-LDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
R+K LD + D PT++I C H L+P+ A GAKR +VPE+LW + Y++A+ V ++
Sbjct: 590 RKKAALDTLGDGDLNPTSAITCRHNALLPDDAAGAKRQVVPEVLWSYFYQNAVVVGGEEQ 649
Query: 410 LGCSTFPLDSEECPECSDALSEV--ACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKY 467
G FP+++E C C S CL S RA K+++RQ E + G++ L+ Y
Sbjct: 650 RGHKPFPVNTENCKICEAEHSHTLTKCLMLSFRATKMEQRQKQEAIFSGRNPVLNPGDVY 709
Query: 468 YLLPSTWLTKWRNYISPSGKNASSIE-PEILDGVIDSLKCEKHLRLLERPPDLV-CKRGS 525
YL+PS+W++ WR YI SGKN IE P L+ + SL C KH LL PP L +RG
Sbjct: 710 YLVPSSWISLWRAYIGASGKNVLDIEEPVGLERFLSSLLC-KHGGLLYNPPALTRTRRGE 768
Query: 526 IYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEE 585
+ QK S+ D +V+ +DW +FC++W KG+ V EE
Sbjct: 769 LVQKASSDDVQVVVSRDDWVYFCQQWDANAGKGIRAYV--------------------EE 808
Query: 586 PCGPRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAP 645
P E E + P++RT PE+C +CI +RE+ EL+ KLNY + I+V LV+GKE P
Sbjct: 809 AQMPDRPEKELSELKLPILRTEPEVCRECIDDRETTELVHKLNYTNATITVDLVQGKEPP 868
Query: 646 RSILEASESMFEPDRRASKRSRKTRSF----VNLKVSASTSIYQLKMMIWESLGVVKENQ 701
S++ A+ + + +RR SKR+R+T + V L VS +T++YQLKM+IWE LGVVKENQ
Sbjct: 869 PSLVFAAANQ-DAERRTSKRARRTVATGNKQVKLTVSGTTTVYQLKMLIWEWLGVVKENQ 927
Query: 702 ILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIA 742
+H G+ + E TLAD+ + P +LWV DS +HEHRDIA
Sbjct: 928 EVHFGKVELTDESTTLADVGVLPNSQLWVSDSGLHEHRDIA 968
>gi|242083440|ref|XP_002442145.1| hypothetical protein SORBIDRAFT_08g014960 [Sorghum bicolor]
gi|241942838|gb|EES15983.1| hypothetical protein SORBIDRAFT_08g014960 [Sorghum bicolor]
Length = 310
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 213/301 (70%), Gaps = 8/301 (2%)
Query: 405 KPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLD 464
K DD++ TFP D + C CS LS+VA +E ++RA K+K+RQ HEKLA GKS L
Sbjct: 5 KADDIV---TFPSDCQPCEICSQELSDVASVEGNLRAVKVKQRQKHEKLATGKSFTLHPG 61
Query: 465 CKYYLLPSTWLTKWRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKR 523
KY+L+PS+WL++WR YI+ +GKN SS+ EP L+ V+ SL CEKH RLL+RP DLVCKR
Sbjct: 62 QKYFLVPSSWLSEWRAYITATGKNISSLPEPHSLEEVVSSLICEKHSRLLQRPLDLVCKR 121
Query: 524 GSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLS 583
GSI QK S TDGLT++ E DWK F EEW EKG+S + FS ++ ++L G + +
Sbjct: 122 GSITQKMSNTDGLTVIPEYDWKLFSEEWSARPEKGISAEIAFSKSSQDKLHGPSEATAIV 181
Query: 584 EEPCGPR-DEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGK 642
+ G D+ N+++ + P +RT PE+CE+CIGERESC L++KLNY ++DI V+ VRGK
Sbjct: 182 DGDRGKSLDDTNDDLGASEPYIRTDPEVCEECIGERESCALVEKLNYQNEDIHVYFVRGK 241
Query: 643 EAPRSILEA-SESMFEPDRRASKRSRKTRS--FVNLKVSASTSIYQLKMMIWESLGVVKE 699
EAP+SI EA S++ DRR SKRSR+ S ++LKVS STSIYQLK+MIWESLGV
Sbjct: 242 EAPKSIKEACSKAAVVADRRTSKRSRRASSGNSISLKVSGSTSIYQLKLMIWESLGVCTL 301
Query: 700 N 700
N
Sbjct: 302 N 302
>gi|449499614|ref|XP_004160864.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like [Cucumis
sativus]
Length = 169
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/167 (77%), Positives = 143/167 (85%), Gaps = 2/167 (1%)
Query: 609 EICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRK 668
+ICE+CIGERESCELMQKLNY +DI V+ RGK+AP+SILEASES +PDRR SKR+RK
Sbjct: 3 QICEECIGERESCELMQKLNYTGEDICVYFSRGKDAPKSILEASESTVDPDRRISKRARK 62
Query: 669 TRS--FVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNIFPGD 726
T S FVNLKVS STS+YQLKMMIWE GVVKENQIL KG RIID E TLAD NIFPGD
Sbjct: 63 TNSGNFVNLKVSGSTSVYQLKMMIWECFGVVKENQILRKGNRIIDGETDTLADKNIFPGD 122
Query: 727 KLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQVV 773
KLWV DSEIHEHRDIADELSD KMN+QH EEGFRGTLL +N+SS+VV
Sbjct: 123 KLWVMDSEIHEHRDIADELSDPKMNIQHTEEGFRGTLLAANVSSEVV 169
>gi|414865456|tpg|DAA44013.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 541
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 148/247 (59%), Gaps = 22/247 (8%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS P+ Y+L+A+LIHKGTA NSGHY+A IKDE+ GQW
Sbjct: 315 KKKISSSFSFPGQLDMGKRLSNPTS-SYTYELAAILIHKGTAANSGHYVAHIKDESNGQW 373
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDE VS LG HPFGE + +K R +P +EG+ N+ + H ++
Sbjct: 374 WEFDDETVSKLGLHPFGENLGKTSNKDDR------KPQGISIEGSVTNNNNGHQEAAS-- 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ S E F+S DAYMLMY ++ + + + NN LP H
Sbjct: 426 SSSPGEMFSSTDAYMLMYKCTNKDGNATESNKIMEFNNS-------------LLPHHFLD 472
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N S + CE+++ +K L I+ER+QEV+S+L EAP + ++WIS+DWLRQ
Sbjct: 473 EINEQNASCMKSCEEYQSKKGSHLAYITERRQEVKSILIEAPANPEDNSYFWISTDWLRQ 532
Query: 242 WADKIFP 248
WAD I P
Sbjct: 533 WADNITP 539
>gi|384252765|gb|EIE26241.1| hypothetical protein COCSUDRAFT_83616 [Coccomyxa subellipsoidea
C-169]
Length = 1287
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 197/452 (43%), Gaps = 81/452 (17%)
Query: 2 KKKITSPFCFPGELNMQRRLSE--PSQL------DLIYDLSAVLIHKGTAVNSGHYIALI 53
K K + FP +L++ L PSQL + Y+L ++LIHKG++ + GHY+A +
Sbjct: 287 KVKASDKLSFPLKLDLAPLLGTDGPSQLRGSPQRETQYELMSILIHKGSSASHGHYVAHV 346
Query: 54 KDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQ---------------- 97
DE +WW FDDE V+ + P GE + ++ P Q
Sbjct: 347 WDEEAEKWWRFDDETVAEMPKGPVGERGDHGVAAEKKASPTASQFFPLVHLDGGAPSTKG 406
Query: 98 -------------------------PVSERVEGANENHVDVHLPSSEYYNGSNVERFTSN 132
P V A+ DV P ++ + +R S
Sbjct: 407 KRKVSAAAAEENEVEVVGVVRRQGTPDDPMVLDADPEPADVSTPPNQAAEETQQDRIASA 466
Query: 133 DAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLD 192
+AYML+Y + ++R I LP+ L + E ++
Sbjct: 467 NAYMLVYRRQSHHGGARR----------------------IELPAKLNALMAEERAAFET 504
Query: 193 GCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLD 252
C +++ +K ++ + ++ VR +L A +P E W+S+DWL+QWAD+ +
Sbjct: 505 SCAKYEAKKEELMEKVQRQQASVRQILESALLPGPEWESRWVSADWLKQWADQGSTEPVK 564
Query: 253 NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCA 312
N + C HGK+ +K KRI+++AW + + GGP L++ D C CL +V A
Sbjct: 565 NDPLLCSHGKLDPAKKTEGKRITAEAWGRLQEEVGGGPELSDGDACWQCLAVSLQGLVDA 624
Query: 313 DSYRDRRKS----LKGLADDV--LSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPT 366
R S + LA++V S + +YVSKSWL W RR + + PT
Sbjct: 625 QQGSMERDSVLQIVNALAEEVEGHSRQPQPDDFYVSKSWLLGWRRRAKSTVNTMS---PT 681
Query: 367 TSIRCPHGQLMPEKAG-GAKRLLVPEILWLFI 397
SI C HG L+PE AG AKR+ VP +W +
Sbjct: 682 QSITCKHGGLLPEVAGPKAKRIAVPSFVWQHL 713
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 155/379 (40%), Gaps = 41/379 (10%)
Query: 418 DSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTK 477
D+ CP C L+ A ++ + +R +LA S+ L Y L+P WL
Sbjct: 915 DANICPICMVELNADASTGQHLKEQAGAQRNVLAQLAASTSLHLEPGGSYCLVPRPWLAA 974
Query: 478 WRNYISPSGKNASSI--EPEILDGVIDSLKCEKHLR-------LLERPPDLVCKRGSIYQ 528
WR ++ SG+ S P + + + C H L PP +V +RG Q
Sbjct: 975 WRAFLGTSGRRGSDAGQPPPPVPSAVAEVFCTCHPADDKCPGCLSVTPPAVVKRRGRWAQ 1034
Query: 529 KGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPC- 587
TD ++ DW+ +G ++ LS LV + + EP
Sbjct: 1035 ASLETDAFEVINLADWEHLMAFYG--DDRTLSEAHPARRPIRATLVVDPSAPVKAAEPAE 1092
Query: 588 -GPRDEENN--EIESQRPVVR-----------TFPEICEDCIGERESCELMQKLNYCDKD 633
G +E++ E+++P R T P+ C + ERE +++L Y D
Sbjct: 1093 GGAEAQEDDGAAAEAKKPSARGTDESARAHLATDPDWCRQAVQEREDALRVEQLTYTDAT 1152
Query: 634 ISVFLVRGKEAPRSILEASESMFEP-DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWE 692
V LV+ +S + S + F R SKR R+ ++ V VSA +++ LK+ I E
Sbjct: 1153 FHVELVQ-----QSDVTGSATAFTVLGERRSKRVRRGKAAVT--VSALNTLWDLKLRILE 1205
Query: 693 SLGVVKENQ----ILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELS-- 746
+L V N + H +D + A+LA+L + G + V + + D+ L
Sbjct: 1206 ALSVHPRNADVYCLAHSKWTKLDNDEASLAELGVGQGQGIRVVHAGVVSDDDLTGVLGGP 1265
Query: 747 -DQKMNVQHVEEGFRGTLL 764
+ + + E GF GT L
Sbjct: 1266 VEANSSARAAERGFAGTGL 1284
>gi|440795365|gb|ELR16489.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 960
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 197/509 (38%), Gaps = 99/509 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLD-----------LIYDLSAVLIHKGTAVNSGHYI 50
K+K+ FP E++M + + E + L Y+L VLIH G N GHYI
Sbjct: 271 KRKLQDSIAFPLEIDMGKYMQEFDERQNEVENKRRRKGLAYELVGVLIHVGPGANVGHYI 330
Query: 51 ALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENH 110
A +DE T +WW FDD V+ L G + + + + EG E
Sbjct: 331 AHTRDEVTKKWWRFDDAVVTPLDEAKIG---------IEKEPKKNKKKGAALPEGMTE-- 379
Query: 111 VDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFN 170
S+++YML+Y L+ D+E +
Sbjct: 380 --------------------SSNSYMLIYALK-DRETVAQPQ------------------ 400
Query: 171 DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEP 230
LP+ + NR + E++ ++ E + I KQ + S VP +
Sbjct: 401 ----LPASAQAFVDIDNREFEKQIEEYDMKAKEERERIEAHKQSYTAHFSTLGVPPGTKE 456
Query: 231 FYWISSDWLRQW--ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG 288
+ WI+ WLRQW K P +DNT + C H + K+ KRI+ +AW+ ++ G
Sbjct: 457 YNWIAVSWLRQWVIGSKELPP-IDNTELMCAHDMLDPRKLSHAKRITPEAWSMLQSQFKG 515
Query: 289 GPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQ 348
GP L+ + YCM C H + Y +++ L + +G +G Y +S SWL Q
Sbjct: 516 GPVLSQECYCMPCSAALCHELAKDAEYNRMKETTLNL---ITAGPAPKG-YILSTSWLNQ 571
Query: 349 WTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI---YEDAMKVK 405
+ P + I C HG L P AGG R +VP W ++ + + +
Sbjct: 572 KSE------PEDLSKNMNEKITCEHGNLCP--AGG--RRVVPAQAWSWLRSEFPEGAEFH 621
Query: 406 PDDLLGCSTFPLDSEECPECSDALSEVACLE------------DSIRARKLKERQNHEKL 453
+ C DS E L V E D + L+E Q
Sbjct: 622 SSE-SACKECIRDSAANKEELQNLKVVKAKEKVLFPARIGRRKDDLTVLSLREEQRRVN- 679
Query: 454 ALGKSIPLSLDCKYYLLPSTWLTKWRNYI 482
A+ C+YY++ W +WR ++
Sbjct: 680 AIANEKDAKPGCRYYIISQEWFGRWRAWV 708
>gi|432858832|ref|XP_004068960.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Oryzias
latipes]
Length = 1048
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 193/836 (23%), Positives = 334/836 (39%), Gaps = 166/836 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP +L+M+ L +Y+LSAVLIH+G + SGHYIA +KD TG W
Sbjct: 303 KKKLNTFISFPEQLDMEPFLEARPGQKSVYELSAVLIHRGISAYSGHYIAHVKDALTGDW 362
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ V+S S + + + H
Sbjct: 363 YKFNDEEIEKMEGKKLQLGIEEDIAEAVKSP-------SRKPKCSKGYHC---------- 405
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y ++ D+ D++ +E +P+ L +
Sbjct: 406 ---------SRNAYMLVYKVQADEHP--------DLSETSVE-----------VPAFLQR 437
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P E+ + +I +WL++
Sbjct: 438 LVDRDNHRFEEWCMEMSDMRKQSVDKGKAKHEEVKELYELLPARDGEQ-YEFIPLEWLKK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D + +D + C HGK+ K+ KR+S +A + +Y GGP L C
Sbjct: 497 WLDDSTATKEIDTSLFLCSHGKLHPDKVADCKRVSLQAAELLYRRYGGGPRLDGSSLCRD 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRR-------- 352
C+ + + + K + L LSG EG Y+V K+ L+ W +
Sbjct: 557 CVSWRCRVLRLKNQLNEDYKEVSNLVKRTLSG---EG-YWVGKASLRSWRQLALEQLEED 612
Query: 353 ----KNLDAPSEADGGPTTSIR----------------------CPHGQLMPEKAGGAKR 386
K+ D+ + G T +I+ C HG L +A ++
Sbjct: 613 EHEGKHSDSQTNGQGPHTNNIKEFCSDLSGGTEEEMKTFNEDILCSHGGLSILEA--ERK 670
Query: 387 LLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLED 437
L+ PE+ W + E K F E C +C ++A+S++ L+
Sbjct: 671 LVSPEV-WSKLREYFPKA--------PEFTEKQEACRQCLTLEQEEKDNEAVSKMMALDQ 721
Query: 438 SIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEIL 497
+ L +N L+ P + D Y++P ++ +WR +I K++ +
Sbjct: 722 KNQLLNLFHEKNRPTLS---KWPQNTDV-LYVVPLFFVEEWRKFIRRPTKSSP------V 771
Query: 498 DGVIDSLKCEKHLRLLERPPDLVCKRGS-IYQKGSATDG----LTIVTENDWKWFCEEWG 552
V +SL L+C G ++ S G + ++ ++W+ +
Sbjct: 772 SNVGNSL--------------LLCPHGGFMFTYDSLISGDAQHIALLWPSEWEVISRLF- 816
Query: 553 GIKEKGLSVIVDFSNNAGN--------ELVGSCKEILLSEEPCGPRDEENNEI------E 598
I ++ +S+ + G+ EL C+E L ++ R+ I E
Sbjct: 817 -IVDQAISIHCLRESTEGSTPQYTTQPELCWDCRESFLFQQQKDLREYNQATIYIRKVLE 875
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYC-DKDIS--------VFLVRGKEAPRSIL 649
R V PE+ E E KL D D S + L G AP ++
Sbjct: 876 DARMVKDVTPEMNASSSEAEEEREEHLKLEGGEDPDFSQSQDGAKRLRLADGTVAPAALP 935
Query: 650 EASESMFEPDRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRI 709
+ + RR S R RK R L VSA+ ++ +LK+ I + V +Q L +
Sbjct: 936 VTTSAKVGGIRR-STRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKS 994
Query: 710 IDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ + ATL L + P + ++ E IAD + D V+ EEGF+GT L
Sbjct: 995 LTDDSATLGSLGVVPESIICLKADE-----PIADYAAMDDAYQVRLPEEGFKGTGL 1045
>gi|410919273|ref|XP_003973109.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Takifugu
rubripes]
Length = 1044
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 223/522 (42%), Gaps = 90/522 (17%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP +L+M L +Y+LSAVLIH+G + SGHYIA +KD +TG W
Sbjct: 303 KKKLNTFISFPEQLDMGPFLEGKQDQHSVYELSAVLIHRGISAYSGHYIAHVKDAHTGDW 362
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ V+S+ +P +
Sbjct: 363 YKFNDEEIEKMEGKKLQLGLEEDIAETVKSQTR--KPKCTK------------------- 401
Query: 122 NGSNVERFTSNDAYMLMYNLRRDK-EDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
GS+ R +AYML+Y ++ ++ DS R V +P+ L
Sbjct: 402 -GSHCSR----NAYMLVYKVQEEQCSDSCRTSVE--------------------VPAFLQ 436
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + + N + + C + + + +D + +EV+ L P P +P+ +I DWL+
Sbjct: 437 RLVDQDNHKFEEWCSEMADMRKQSVDKGKAKHEEVKELYELLP-PRDGQPYEFIPLDWLK 495
Query: 241 QW-ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D +DNT C HGK+ +G KR+S +A + + +Y GGP L C
Sbjct: 496 KWLEDSTATKEIDNTPFLCSHGKLHPDMVGDSKRVSHQAAHLLYERYGGGPRLDGSCLCR 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+ + + + + K + L SG +++V K+ L+ W R+ L
Sbjct: 556 ECVGERCRVLRLKNQLNEDYKEVSNLVKRAASG----NSFWVGKASLRGW-RQLALGQLK 610
Query: 360 EADGGPT-----TSIRCPH------GQLMPEKAGGAKRLLVPEIL----WLFIYEDAMKV 404
E + G T T+ + PH G + E G + +I+ L I E K+
Sbjct: 611 EDEQGITHGNIQTNGQGPHSNSKESGPELSEGNGDEMKTFNEDIVCCHGGLSIQETERKL 670
Query: 405 KPDDLLG--------CSTFPLDSEECPEC---------SDALSEVACLEDSIRARKLKER 447
++ F + E CP+C ++A+S++ L+ + L +
Sbjct: 671 ISVEVWAKLREYFPKAPEFSQNEEACPQCLMLEQEEKDNEAVSKMMALDQKNQLLNLFQE 730
Query: 448 QNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
+N LA P + Y++P ++ +W+ +I K++
Sbjct: 731 KNRPVLA---KWPQGTNV-LYIVPLFFVDEWKKFIRRPTKSS 768
>gi|348543830|ref|XP_003459385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Oreochromis
niloticus]
Length = 996
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 218/532 (40%), Gaps = 109/532 (20%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP +L+M L E +Y+LSAVLIH+G + SGHYIA +KD TG W
Sbjct: 303 KKKLNSFISFPEQLDMGPFLEEKQDEKCVYELSAVLIHRGISAYSGHYIAHVKDARTGDW 362
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ V+S+ +++ + + H
Sbjct: 363 YKFNDEEIEKMEGKKLQLGIEEDIAETVKSQ-------TKKPKCSKGYHC---------- 405
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y +++++ F ++ +P+ L +
Sbjct: 406 ---------SRNAYMLVYKVQQEENSGP-------------------FRTNVEVPAFLQR 437
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ + N + + C + + + +D + +EV+ L P EP+ +I DWL++
Sbjct: 438 LVDQDNHKFEEWCSEMTDMRKQSVDKGKAKHEEVKELYKLLPARD-GEPYEFIPLDWLKK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D + +D++ C H K+ K+G +++S +A + +Y GGP L C
Sbjct: 497 WLDDSTATKEIDSSRFLCSHDKLHPDKVGDTRKVSMQAAQLLYERYGGGPRLNESSLCRE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTR--------- 351
C+ + + + K + L SG ++V K+ L+ W +
Sbjct: 557 CVSQRCRVLRLKNQLSEDYKEISNLVKRTFSG----AGFWVGKASLRSWRQLALEQLEED 612
Query: 352 -RKNLDAPSEADG-GPTTS-----------------------IRCPHGQLMPEKAGGAKR 386
+ S+ +G GP T+ I C HG L + ++
Sbjct: 613 EHETTHNNSQTNGQGPHTNNSKEFSSELSECTEDEMKTFNEDIVCSHGGLSILET--ERK 670
Query: 387 LLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLED 437
L+ PE+ W E K P+ F D E C +C ++A+S++ L+
Sbjct: 671 LVSPEV-WTKFREYFPKA-PE-------FTQDQEPCQQCLTMEQEEKDNEAVSKMMALDQ 721
Query: 438 SIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
+ L +N L P D Y++P ++ +WR +I K++
Sbjct: 722 KNQLLNLFHEKNRPALT---KWPQGTDV-LYIVPLFFVDEWRKFIRRPTKSS 769
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L + + + ATL L
Sbjct: 888 RRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLFIDGKSLTDDSATLGSL 947
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLLTSNL 768
I P + ++ E IAD + D V+ EEGF+G +S+L
Sbjct: 948 GIIPESIICLKADE-----PIADYAAMDDVYQVRMPEEGFKGEHASSSL 991
>gi|443732832|gb|ELU17396.1| hypothetical protein CAPTEDRAFT_178380 [Capitella teleta]
Length = 1021
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 197/843 (23%), Positives = 319/843 (37%), Gaps = 201/843 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP L+M LSEP + +Y L AVLIH G + SGHY A I D W
Sbjct: 301 KKKLNSFIQFPETLDMSSVLSEP-EGSRVYSLKAVLIHSGPSAYSGHYTAHIHDTQKEAW 359
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + S+ +E E + S+
Sbjct: 360 FKFNDEVIEKMK--------------------------SKGLELGAEEDFGMEGKSAAKK 393
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ +S +AYML+Y L DS DV E LP L +
Sbjct: 394 PRTGKGLHSSRNAYMLVYTL-----DSSVHGTHVDVQLDE-------------LPKELQE 435
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLE-EPFYWISSDWLR 240
I+ N ++ ++ + K + +R EV+++LS+ P PS E + WI S W++
Sbjct: 436 LIQHDNDAFAVWLKELSVMKEVNISRGHDRVAEVKNILSKLPAPSGELKNSEWILSGWIQ 495
Query: 241 QWA----DKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TND 295
+W P +DN+S+ C+H ++ + + K IS +A + KY GGP L
Sbjct: 496 KWLGCDHSHQVPK-IDNSSLLCIHNRLNPDMVNAAKCISEEASELIYAKYEGGPRLKVEA 554
Query: 296 DYCMTCLI--------------DGAHTVVCADSY----------RDRRKSLKGLADDVLS 331
C C+ DG S+ + +S K +A D +
Sbjct: 555 SLCQDCVKERCKEIRSKARLTEDGKAIASMLKSHPEVSTGVWVGKVSLRSWKKMATDKMK 614
Query: 332 GKLVEGTYYVSKSWLQ---QWTRRKNLDAPSEADGGPTTS--------IRCP-HGQLMPE 379
G V+ T KS LQ T +++D ++ T+ + C HG L P+
Sbjct: 615 G--VKETILSKKSTLQFEFLETCDEDIDVKENSNESETSERLLTFNEDLLCEDHGNLSPD 672
Query: 380 KAGGAKRLLVPEILW--LFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLED 437
+ R LVP+ +W L IY G T+ D+E C +C A + +D
Sbjct: 673 VSC---RKLVPQDIWTRLQIY----------FPGVVTYSSDAEPCAQCLAAQAGERAQKD 719
Query: 438 SIRARKLKERQNHEKLALGKSIPL--SLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPE 495
+ + + L L K P+ L K L+P+ ++ WR +I S
Sbjct: 720 RFKTLAMTLKSALANLYLNKQRPIISELTSKINLVPTQFIMDWRQFIKDS---------- 769
Query: 496 ILDGVIDSLKCEKHLRLLERPPDLVCKRGS---IYQKGSATDGLTIVTENDWKWFCEEWG 552
I +++ +L C+ G + + + LT V ++W
Sbjct: 770 INKPFTETIPITPYL----------CRHGGFLYFLENTTFPNCLTAVYPSEW-------- 811
Query: 553 GIKEKGLSVIVDFSNNAGNELVGSCKEILLSE--EPCGPRDEENNEIESQRPVVRTFPEI 610
+LLS +P G + N + + + P++
Sbjct: 812 ---------------------------VLLSRYSKPDGEISIQRNVSDCGKITLSVTPDV 844
Query: 611 CEDCIGERESCELMQKLNYCD----------KDISVFLVRGKE----------------- 643
C++C RE E+ + +Y D +D+S F +
Sbjct: 845 CQECCLAREREEVAAQFSYKDAAIYIRKSAKEDVSAFANEATDPENGSNDEKRKLDDQTG 904
Query: 644 APRSILEASESMFEPDRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQIL 703
AP S + S P R++S R R R ++V A ++ LK+ I + V +Q L
Sbjct: 905 APPS--KQSRLDVGPSRKSS-RHRHVRGEKKIEVDACNTLRDLKLKIMKVFSVPPFDQNL 961
Query: 704 HKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTL 763
R + TLA L+I PGD +++Q E E ++ + + E GF GT
Sbjct: 962 ICNGRELKGNTDTLAALHILPGDVIYLQADEPVEDPMFLEDATKASVP----ETGFLGTG 1017
Query: 764 LTS 766
L S
Sbjct: 1018 LVS 1020
>gi|74223408|dbj|BAE21579.1| unnamed protein product [Mus musculus]
Length = 1080
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 214/530 (40%), Gaps = 116/530 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 336 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 394
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 395 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 425
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ +++ V P+ L
Sbjct: 426 RKPKCGKGTHCSRNAYMLVYRLQAQEKNHTMVQV----------------------PAFL 463
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 464 QELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 521
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A N F+ +Y GGP LT C
Sbjct: 522 QKWLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAANIFYSRYGGGPRLTVKALC 581
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 582 KDCVVERCRVLRLKNQLNEDYKAVNNLLKSTMKGD----GFWVGKSSLRSW-RQLALEQL 636
Query: 359 SEADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLL 388
E DG S I CPHG+L +R L
Sbjct: 637 DEQDGEAEQSNGKINGSTFNKDESKEEKKEEEEELNFNEDILCPHGEL---SISENERRL 693
Query: 389 VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSI 439
V + W + + K FP E C +C ++AL ++ E
Sbjct: 694 VSQEAWSKLQQYFPKA--------PEFPSYRECCSQCKILEREGEENEALHKMIANEQKT 745
Query: 440 RARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
L + +N L+ + P D Y++ +L +WR ++ ++A
Sbjct: 746 SLPNLFQDKNRPCLS---NWPEDTDA-LYIVSHFFLDEWRKFVRKPARSA 791
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 978 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 1037
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1038 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1077
>gi|114053325|ref|NP_570949.2| ubiquitin carboxyl-terminal hydrolase 48 [Mus musculus]
gi|115311888|sp|Q3V0C5.2|UBP48_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 48; AltName:
Full=Deubiquitinating enzyme 48; AltName: Full=Ubiquitin
thioesterase 48; AltName:
Full=Ubiquitin-specific-processing protease 48
gi|151555299|gb|AAI48643.1| Ubiquitin specific peptidase 48 [synthetic construct]
Length = 1052
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 214/530 (40%), Gaps = 116/530 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 367 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 397
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ +++ V P+ L
Sbjct: 398 RKPKCGKGTHCSRNAYMLVYRLQAQEKNHTMVQV----------------------PAFL 435
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 436 QELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 493
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A N F+ +Y GGP LT C
Sbjct: 494 QKWLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAANIFYSRYGGGPRLTVKALC 553
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 554 KDCVVERCRVLRLKNQLNEDYKAVNNLLKSTMKGD----GFWVGKSSLRSW-RQLALEQL 608
Query: 359 SEADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLL 388
E DG S I CPHG+L +R L
Sbjct: 609 DEQDGEAEQSNGKINGSTFNKDESKEEKKEEEEELNFNEDILCPHGEL---SISENERRL 665
Query: 389 VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSI 439
V + W + + K FP E C +C ++AL ++ E
Sbjct: 666 VSQEAWSKLQQYFPKA--------PEFPSYRECCSQCKILEREGEENEALHKMIANEQKT 717
Query: 440 RARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
L + +N L+ + P D Y++ +L +WR ++ ++A
Sbjct: 718 SLPNLFQDKNRPCLS---NWPEDTDA-LYIVSHFFLDEWRKFVRKPARSA 763
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 950 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 1009
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1010 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1049
>gi|148697967|gb|EDL29914.1| mCG120445 [Mus musculus]
Length = 777
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 166/365 (45%), Gaps = 60/365 (16%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 50 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 108
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G K+ G E D+ PS
Sbjct: 109 YKFNDEDIEKM-----------EGKKLQL--------------GIEE---DLAEPSKSQT 140
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ + N+ ++ +P+ L
Sbjct: 141 RKPKCGKGTHCSRNAYMLVYRLQ-----------AQEKNHTMVQ-----------VPAFL 178
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 179 QELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 236
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A N F+ +Y GGP LT C
Sbjct: 237 QKWLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAANIFYSRYGGGPRLTVKALC 296
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 297 KDCVVERCRVLRLKNQLNEDYKAVNNLLKSTMKGS---DGFWVGKSSLRSW-RQLALEQL 352
Query: 359 SEADG 363
E DG
Sbjct: 353 DEQDG 357
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 648 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 707
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFR 760
+ P + ++ E IAD + D M V EEGF+
Sbjct: 708 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFK 743
>gi|47208155|emb|CAF94665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1114
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 54/365 (14%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP +L+M L +Y+LSAVLIH+G + SGHYIA +KD +TG W
Sbjct: 303 KKKLNTFISFPEQLDMGPFLEGKHDQSCVYELSAVLIHRGISAYSGHYIAHVKDAHTGDW 362
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ V+S+ + + + H
Sbjct: 363 YKFNDEEIEKMEGKKLQLGIEEDIAETVKSQ-------TRKPKCTKGYHC---------- 405
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKE-DSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y ++ ++ DS R V +P+ L
Sbjct: 406 ---------SRNAYMLVYKVQEEQSSDSCRASVE--------------------VPAFLQ 436
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + + N + + C + + + +D + +EV+ L P +P+ +I DWL+
Sbjct: 437 RLVDQDNHKFEEWCSEMADMRKQSVDKGKAKHEEVKELYELLPARD-GQPYEFIPLDWLK 495
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D + +DNT C HGK+ K+G KR+S +A + +Y GGP L + C
Sbjct: 496 KWLDDSTATKEIDNTRFLCSHGKLHPDKVGDSKRVSGQAAQLLYDRYGGGPRLDSSCLCR 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+ + + + K + L SG +++V K+ L+ W R+ LD
Sbjct: 556 ECVGQRCRVLRLKNQLNEDYKEVSNLVKRAASGD----SFWVGKASLRSW-RQLALDQLE 610
Query: 360 EADGG 364
E + G
Sbjct: 611 EDEQG 615
>gi|196007082|ref|XP_002113407.1| hypothetical protein TRIADDRAFT_57537 [Trichoplax adhaerens]
gi|190583811|gb|EDV23881.1| hypothetical protein TRIADDRAFT_57537 [Trichoplax adhaerens]
Length = 1002
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 220/524 (41%), Gaps = 102/524 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSE-PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KKK+ S FP L+M + + P+ IYD+ AVLIH+G SGHY IK++ +
Sbjct: 350 KKKLKSILHFPEVLDMTKYIRHAPTDTSFIYDIKAVLIHRGAGTQSGHYFTHIKEDESKS 409
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+ F+DE V L SG K+ E + S+ + +++N P
Sbjct: 410 WYVFNDEAVYQL-----------SGKKLQIDEDSM---ESDDLSQSSKNPK----PVKAG 451
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
Y+ S AYML+Y RR D+ +++ LP +
Sbjct: 452 YHA-------SRSAYMLVYT-RRSSIGEYSSDL----------------KENVILPRSIV 487
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSL----EEPFYWISS 236
K I E N S + + IS R QE+ + PSL ++ + WI +
Sbjct: 488 KIISEDNVSIKNWINAVTEQMLSHTAAISNRAQEINRIY-----PSLSADTDQTYEWIPT 542
Query: 237 DWLRQWADKI-FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTND 295
+WL +W K F S +DN ++ C H K+ + +KRI+ N+ + Y GGP LT +
Sbjct: 543 EWLLEWLRKQDFNSPIDNKTVLCNHKKLSPDSVSMVKRINQIYANELYKLYGGGPRLTRE 602
Query: 296 DYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW------ 349
D C C+ + + + K +K L E +++ K L+ W
Sbjct: 603 DMCKQCVEEKYRRIQFDTRLNNDWKFIKSTITKTLPTGQTE--FWIGKVSLRNWKGLTIK 660
Query: 350 ------------TRRKNL-----DAPSEADGGPTTS-----------IRC-PHGQLMPEK 380
T +N DA S+A+ ++ + C HG L E+
Sbjct: 661 KFEKDISESSLKTTTENSEPAKEDAESDANLAADSATYDDEFEFNQDLLCEEHGNLTAEE 720
Query: 381 AGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIR 440
+ R +V E++WL + P+ +++P+ + C C + E+++R
Sbjct: 721 SN---RQIVSEVVWLML----KYYFPE----AASYPVGTPICHLCEEIAKARVEDEETLR 769
Query: 441 ARKLKERQNHEKLALGKSIP-LSLDCKYYLLPSTWLTKWRNYIS 483
E++ K+ KS P + + ++Y++P +++ KWRN+IS
Sbjct: 770 LYAATEKKILSKIYSNKSRPSIEDEGEFYVIPLSFVRKWRNFIS 813
>gi|354483014|ref|XP_003503690.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48, partial
[Cricetulus griseus]
Length = 1026
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 212/523 (40%), Gaps = 115/523 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 281 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 339
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 340 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 370
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ +++ V P+ L
Sbjct: 371 RKPKCGKGTHCSRNAYMLVYRLQTREKNHTMVQV----------------------PAFL 408
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 409 QELVDRDNLKFEEWCVEMAEMRRQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 466
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 467 QKWLDESTPTKPIDNHACLCSHAKLHPDKIPIMKRISEYAADIFYSRYGGGPRLTVKALC 526
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G + ++V KS L+ W R+ L+
Sbjct: 527 KDCVVERCRVLRLKNQLNEDYKTVNNLLKAAMKG---DDGFWVGKSSLRSW-RQLALEQL 582
Query: 359 SEADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLL 388
E DG S I CPHG L +R L
Sbjct: 583 DEQDGEAEQSNGKINGTPFNKDESKEEKKEEEDELNFNEDILCPHGGL---SISENERRL 639
Query: 389 VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSI 439
V + W + + K FP E C +C ++AL ++ E
Sbjct: 640 VSQEAWNKLRQYFPKA--------PEFPSYKECCSQCKILEREGEENEALHKMIANEQKT 691
Query: 440 RARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYI 482
L + +N L+ + P DC Y++ +L +WR ++
Sbjct: 692 SLPNLFQDKNRPCLS---NWPEDTDC-LYIVSHFFLDEWRKFV 730
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 924 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 983
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 984 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1023
>gi|348570805|ref|XP_003471187.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Cavia
porcellus]
Length = 996
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 268 KKKLNTYIGFSEILDMEPYMEQKGG-SYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 326
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + R + H
Sbjct: 327 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRRPKCGKGTHC---------- 369
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 370 ---------SRNAYMLVYRLQSQEKS----------------------NTTVEVPAFLQE 398
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 399 LVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 456
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 457 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 516
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K + L +GK +G ++V KS L+ W R+ L+ E
Sbjct: 517 CVVERCRVLRLKNQLNEDYKMVNNLLK--ATGKGNDG-FWVGKSSLRSW-RQLALEQLDE 572
Query: 361 ADGGPTTS 368
DG S
Sbjct: 573 QDGDADQS 580
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL +L
Sbjct: 894 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGNL 953
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 954 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 993
>gi|431891300|gb|ELK02177.1| Ubiquitin carboxyl-terminal hydrolase 48 [Pteropus alecto]
Length = 1077
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSENLDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKATVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDADQS 620
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 911 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 970
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+ L+
Sbjct: 971 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKDKLV 1010
>gi|395821061|ref|XP_003783867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1
[Otolemur garnettii]
Length = 1036
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 166/363 (45%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCAHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G +G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKG--TDG-FWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|317418911|emb|CBN80949.1| Ubiquitin carboxyl-terminal hydrolase 48 [Dicentrarchus labrax]
Length = 1062
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 52/360 (14%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP +L+M L +Y+LSAVLIH+G + SGHYIA +KD TG W
Sbjct: 303 KKKLNTFISFPEQLDMGPFLEGKQDQKCVYELSAVLIHRGISAYSGHYIAHVKDARTGDW 362
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ V+S+ + + + + H
Sbjct: 363 YKFNDEEIEKMEGKKLQLGIEEDIAETVKSQ-------TRKPKCSKGYHC---------- 405
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y ++ ++ + N+E+ P+ L +
Sbjct: 406 ---------SRNAYMLVYKVQEEESSDPSR------TNVEV-------------PAFLQR 437
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ + N + + C + + + +D + +EV+ L P EP+ +I +WL++
Sbjct: 438 LVDQDNHKFEEWCSEMADMRKQSVDKGKAKHEEVKELYELLPAKD-GEPYEFIPLEWLKK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D + +DN+ C HGK+ K+ KR+S +A + +Y+GGP L C
Sbjct: 497 WLDDSTATKEIDNSFFLCSHGKLHPDKVAESKRVSLQAAELLYERYSGGPRLDGSSLCRE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+ + + + K + + LSG EG Y+V K+ L+ W R+ LD E
Sbjct: 557 CVSQRCRVLRLKNQLSEDYKEVSNMVKRTLSG---EG-YWVGKTSLRSW-RQLALDQLEE 611
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L + + + ATL L
Sbjct: 948 RRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKSLTDDSATLGSL 1007
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLLTSNL 768
+ P + ++ E IAD + D V+ EEGF+G S+L
Sbjct: 1008 GVIPESIICLKADE-----PIADYAAMDDVYQVRMPEEGFKGEHAFSSL 1051
>gi|351706000|gb|EHB08919.1| Ubiquitin carboxyl-terminal hydrolase 48 [Heterocephalus glaber]
Length = 1036
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKDGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + R + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRRPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQSQEKP----------------------NSAVEVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVERDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K + L +GK +G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKMVNNLLK--ATGKGDDG-FWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDADQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|395821063|ref|XP_003783868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2
[Otolemur garnettii]
Length = 984
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCAHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGT---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
>gi|38454304|ref|NP_942080.1| ubiquitin carboxyl-terminal hydrolase 48 [Rattus norvegicus]
gi|81870938|sp|Q76LT8.1|UBP48_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 48; AltName:
Full=Deubiquitinating enzyme 48; AltName: Full=Synaptic
ubiquitin-specific protease; Short=synUSP; AltName:
Full=Ubiquitin thioesterase 48; AltName:
Full=Ubiquitin-specific-processing protease 48
gi|37896769|dbj|BAD00009.1| synaptic ubiquitin-specific protease [Rattus norvegicus]
Length = 1036
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 213/528 (40%), Gaps = 110/528 (20%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGDW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLTEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ +++ V P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKNHTMVQV----------------------PAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCVEMAEMRRQSVDKGRAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKD 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKATMKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLLVP 390
DG S I CPHG+L +R LV
Sbjct: 613 QDGEAEQSNGKINGSPFSKDESKEEKKEEEEELNFNEDILCPHGEL---SISENERRLVS 669
Query: 391 EILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSIRA 441
+ W + + K FP E C +C ++AL ++ E
Sbjct: 670 QEAWSKLQQYFPKA--------PEFPSYKECCSQCKILEREGEENEALHKMIAKEQKTSL 721
Query: 442 RKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
L + +N L+ + P D Y++ +L +WR ++ ++
Sbjct: 722 PNLFQDKNRPCLS---NWPEDTDA-LYIVSHFFLDEWRKFVRKPARST 765
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 934 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|338722133|ref|XP_003364491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Equus
caballus]
Length = 1036
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 166/368 (45%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVERDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKVTVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDADQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|281206937|gb|EFA81121.1| ubiquitin-specific protease 48-like protein [Polysphondylium
pallidum PN500]
Length = 1281
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 170/417 (40%), Gaps = 83/417 (19%)
Query: 22 SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
S S D Y+L+A+L+HKG V SGHYIA IK+E TG+WWEFDD+++ L + G+
Sbjct: 571 SSSSTSDTQYELTAILMHKGIGVTSGHYIAHIKNEITGKWWEFDDQNIRELSNEQIGKDQ 630
Query: 82 SSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNL 141
K E EG +S AYM++Y+
Sbjct: 631 LGEKRKA-----------KELKEGV----------------------ISSQSAYMIIYSK 657
Query: 142 RRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRK 201
+ N E+ + FN++ + ++ K +S+ ++F+
Sbjct: 658 K----------------NREVYKDAPKFNNESII-----EEFKNEEQSFKTKADEFRSTL 696
Query: 202 NRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHG 261
N+ + ERK+ S L V + +YWI++DWL + I +DN+ + C H
Sbjct: 697 NQAIQVWRERKKFCLSQLDTIKVGESSKGYYWINTDWLLNFMKGIESGPIDNSLLLCEHL 756
Query: 262 KVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLI-------DGAHTVVCADS 314
+ K+ MKR+S W+ + KY G P L D +C CL D +S
Sbjct: 757 LLDPKKLPLMKRVSKTFWDSVYDKYRGSPVLDQDSFCRDCLCSLFSSTKDKVDESTLKES 816
Query: 315 YRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHG 374
+ KS+K + G + +Y K W+++ + L A S T I C HG
Sbjct: 817 IIAKEKSVKNRTE----GCFISNQWY--KDWIKKTCNMELLKAKS-----ATEDIECEHG 865
Query: 375 QLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSE 431
L R + + W FI + P + P +EEC +C D E
Sbjct: 866 NL---SIYSQDRKTISKETWDFI----QPLSPTSI----EIPSTTEECQKCQDEYEE 911
>gi|85396984|gb|AAI04897.1| USP48 protein [Homo sapiens]
gi|119615393|gb|EAW94987.1| ubiquitin specific peptidase 48, isoform CRA_a [Homo sapiens]
Length = 983
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|417413223|gb|JAA52954.1| Putative ubiquitin carboxyl-terminal hydrolase 48, partial
[Desmodus rotundus]
Length = 951
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 223 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 281
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 282 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 324
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 325 ---------SRNAYMLVYRLQTQEKT----------------------NTTVQVPAFLQE 353
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 354 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 411
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 412 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 471
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 472 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 527
Query: 361 ADGGPTTS 368
DG S
Sbjct: 528 QDGDADQS 535
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 849 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 908
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 909 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 948
>gi|219517799|gb|AAI43344.1| USP48 protein [Homo sapiens]
Length = 983
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|114554518|ref|XP_001163683.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2 [Pan
troglodytes]
Length = 983
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|114554516|ref|XP_001163789.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 4 [Pan
troglodytes]
gi|410208632|gb|JAA01535.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410257286|gb|JAA16610.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410294072|gb|JAA25636.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410342861|gb|JAA40377.1| ubiquitin specific peptidase 48 [Pan troglodytes]
Length = 1035
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>gi|397485750|ref|XP_003814003.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 3 [Pan
paniscus]
Length = 983
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|390465427|ref|XP_002750442.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1
[Callithrix jacchus]
Length = 1036
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYTRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKVAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|397485746|ref|XP_003814001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1 [Pan
paniscus]
Length = 1035
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>gi|119615394|gb|EAW94988.1| ubiquitin specific peptidase 48, isoform CRA_b [Homo sapiens]
Length = 1034
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 57/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKG----DGFWVGKSSLRSW-RQLALEQLDE 611
Query: 361 ADGGPTTS 368
DG S
Sbjct: 612 QDGDAEQS 619
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 932 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 991
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 992 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1031
>gi|52630449|ref|NP_115612.4| ubiquitin carboxyl-terminal hydrolase 48 isoform a [Homo sapiens]
gi|74750436|sp|Q86UV5.1|UBP48_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 48; AltName:
Full=Deubiquitinating enzyme 48; AltName: Full=Ubiquitin
thioesterase 48; AltName:
Full=Ubiquitin-specific-processing protease 48
gi|30315217|gb|AAP30832.1|AF502942_1 ubiquitin-specific protease 31 [Homo sapiens]
Length = 1035
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>gi|380817112|gb|AFE80430.1| ubiquitin carboxyl-terminal hydrolase 48 isoform a [Macaca mulatta]
gi|383411633|gb|AFH29030.1| ubiquitin carboxyl-terminal hydrolase 48 isoform a [Macaca mulatta]
gi|384940274|gb|AFI33742.1| ubiquitin carboxyl-terminal hydrolase 48 isoform a [Macaca mulatta]
Length = 1035
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTAVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>gi|296206959|ref|XP_002750445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 4
[Callithrix jacchus]
Length = 984
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYTRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKVAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|219521493|gb|AAI43350.1| Ubiquitin specific peptidase 48 [Homo sapiens]
Length = 1035
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>gi|119615396|gb|EAW94990.1| ubiquitin specific peptidase 48, isoform CRA_d [Homo sapiens]
Length = 982
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 57/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGD----GFWVGKSSLRSW-RQLALEQLDE 611
Query: 361 ADGGPTTS 368
DG S
Sbjct: 612 QDGDAEQS 619
>gi|344283413|ref|XP_003413466.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Loxodonta
africana]
Length = 1036
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGGYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKATVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDADQS 620
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|444728056|gb|ELW68520.1| Ubiquitin carboxyl-terminal hydrolase 48 [Tupaia chinensis]
Length = 1797
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 218/524 (41%), Gaps = 114/524 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA ++D +G+W
Sbjct: 298 KKKLNTYIGFSEVLDMEPYV-EHKGGSHVYELSAVLIHRGVSAYSGHYIAHVRDPQSGEW 356
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G K+ G E D+ PS
Sbjct: 357 YKFNDEDIEKM-----------EGKKLQL--------------GIEE---DLAEPSKSQT 388
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ ++ N + +P+ L
Sbjct: 389 RKPKCGKGTHCSRNAYMLVYRLQTQEK----------------------LNTTVQVPAFL 426
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L +P+ EP+ ++S +WL
Sbjct: 427 QELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQR--LPAGAEPYEFVSLEWL 484
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 485 QKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALC 544
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 545 KECVVERCRVLRLKNQLNEDYKTVNNLLKATVKGN---DGFWVGKSSLRSW-RQLALEQL 600
Query: 359 SEADG----------GPTTS--------------------IRCPHGQLMPEKAGGAKRLL 388
E DG G T S I CPHG+L +R L
Sbjct: 601 DEQDGDADQSNGKMNGNTLSKDESKEERKEEEEELNFNEDILCPHGELC---ISENERRL 657
Query: 389 VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSI 439
V + W + + K FP E C +C ++AL ++ E
Sbjct: 658 VSKEAWSKLQQYFPK--------APEFPSYKECCSQCKILEREGEENEALHKMIANEQKT 709
Query: 440 RARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYIS 483
L + +N L+ + P D Y++ ++ +WR ++S
Sbjct: 710 SLPNLFQDKNRPCLS---NWPEDTDV-LYIVSQFFVEEWRKFVS 749
>gi|73950259|ref|XP_535372.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1
[Canis lupus familiaris]
Length = 1036
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 163/363 (44%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKSQLNEDYKTVNNLLKATVKGN---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|403287665|ref|XP_003935059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Saimiri
boliviensis boliviensis]
Length = 992
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 259 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 317
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 318 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 360
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 361 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 389
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 390 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 447
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 448 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 507
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 508 CVVERCRILRLKNQLNEDYKTVNNLLKVAVKGN---DGFWVGKSSLRSW-RQLALEQLDE 563
Query: 361 ADGGPTTS 368
DG S
Sbjct: 564 QDGDAEQS 571
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 890 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 949
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 950 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 989
>gi|410966492|ref|XP_003989767.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 48, partial [Felis catus]
Length = 1041
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 313 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 371
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 372 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 414
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 415 ---------SRNAYMLVYRLQTQEKP----------------------NTIVQVPAFLQE 443
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 444 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 501
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 502 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 561
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 562 CVVERCRVLRLKNQLNEDYKTVNNLLKATVKGN---DGFWVGKSSLRSW-RQLALEQLDE 617
Query: 361 ADG 363
DG
Sbjct: 618 QDG 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 939 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 998
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 999 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1038
>gi|45501059|gb|AAH67261.1| USP48 protein, partial [Homo sapiens]
gi|74353412|gb|AAI03725.1| USP48 protein, partial [Homo sapiens]
Length = 640
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|119615397|gb|EAW94991.1| ubiquitin specific peptidase 48, isoform CRA_e [Homo sapiens]
Length = 703
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
>gi|296206955|ref|XP_002750443.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2
[Callithrix jacchus]
Length = 1051
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 61/370 (16%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 367 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 397
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ ++ N + +P+ L
Sbjct: 398 RKPKCGKGTHCSRNAYMLVYRLQTQEKP----------------------NTTVQVPAFL 435
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 436 QELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 493
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 494 QKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYTRYGGGPRLTVKALC 553
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 554 KECVVERCRVLRLKNQLNEDYKTVNNLLKVAVKGN---DGFWVGKSSLRSW-RQLALEQL 609
Query: 359 SEADGGPTTS 368
E DG S
Sbjct: 610 DEQDGDAEQS 619
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 949 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 1008
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1009 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1048
>gi|395521705|ref|XP_003764956.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Sarcophilus
harrisii]
Length = 978
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 265 KKKLNTYIGFSELLDMEPYMEHKEGI-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 323
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 324 YKFNDEEIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 366
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ S V P+ L +
Sbjct: 367 ---------SRNAYMLVYRLQTQEKSSLTVQV----------------------PAFLQE 395
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 396 LVERDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 453
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP L C
Sbjct: 454 WLDESTPTKPIDNHACLCAHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLNVKALCKD 513
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K + L + G EG ++V KS L+ W R+ L+ E
Sbjct: 514 CVVERCRVLRLKNQLNEDYKIVTNLLKTTVKGN--EG-FWVGKSSLRSW-RQLALEQLDE 569
Query: 361 AD 362
D
Sbjct: 570 QD 571
>gi|219520976|gb|AAI43355.1| USP48 protein [Homo sapiens]
Length = 1047
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 61/370 (16%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 367 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 397
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ ++ N + +P+ L
Sbjct: 398 RKPKCGKGTHCSRNAYMLVYRLQTQEKP----------------------NTTVQVPAFL 435
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 436 QELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 493
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 494 QKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALC 553
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 554 KECVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQL 609
Query: 359 SEADGGPTTS 368
E DG S
Sbjct: 610 DEQDGDAEQS 619
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 945 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 1004
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1005 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1044
>gi|301768298|ref|XP_002919567.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like
[Ailuropoda melanoleuca]
Length = 1036
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 162/363 (44%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ + V P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKTTTTVQV----------------------PAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKSQLNEDYKTVNNLLKATVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|281352003|gb|EFB27587.1| hypothetical protein PANDA_008207 [Ailuropoda melanoleuca]
Length = 1004
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 162/363 (44%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ + V P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKTTTTVQV----------------------PAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKSQLNEDYKTVNNLLKATVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFP 724
+ P
Sbjct: 994 GVIP 997
>gi|326671953|ref|XP_002667675.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Danio rerio]
Length = 1047
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 51/349 (14%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP L+M+ L E + Y+LSAVLIH+G + SGHYIA ++D +T W
Sbjct: 303 KKKLNTFISFPEVLDMEPFL-EGREEKCTYELSAVLIHRGVSAYSGHYIAHVRDAHTNDW 361
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + + H
Sbjct: 362 YKFNDEEIEKMEGKKLQLGIEEDIAETAKSQ-------TRKPKCSKGYHC---------- 404
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y K ++N E + +P+ L K
Sbjct: 405 ---------SRNAYMLVY-----------KQQTEEINQTE---------SPVDVPAFLQK 435
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+++ NR + + C + + + +D + +EV+ L P + + ++ +WL++
Sbjct: 436 LVEQDNRKFEEWCSEMSDMRKQSVDKGKAKHEEVKELYELLPAED-GQSYEFVPLEWLKK 494
Query: 242 WAD-KIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D +DN+ C HGK+ KIG KRIS KA + F +Y GGP L C
Sbjct: 495 WLDDSTAIKEIDNSQFLCTHGKLHPDKIGEAKRISLKAADLLFSRYGGGPRLDRSSLCRD 554
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
C+ + + + + + LA L + E +++ K+ L+ W
Sbjct: 555 CVTQRCRVIRLKNQLNEDYREVTNLAKSALKSE--ESGFWIGKASLRSW 601
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ LK+ I + V +Q L R + + ATL L
Sbjct: 945 RRSTRHRKLRGEKALIVSANQTLKDLKIQIMHAFSVAPFDQNLSIDGRCLKDDSATLGSL 1004
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D V EEGF+GT L
Sbjct: 1005 GVIPESIICLKADE-----PIADYAAMDDVYQVCMPEEGFKGTGL 1044
>gi|330797541|ref|XP_003286818.1| hypothetical protein DICPUDRAFT_31545 [Dictyostelium purpureum]
gi|325083191|gb|EGC36650.1| hypothetical protein DICPUDRAFT_31545 [Dictyostelium purpureum]
Length = 1086
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 229/541 (42%), Gaps = 83/541 (15%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSK 87
+L Y LS +L+H+G + GHYI +KD+ +G+W++FDDE V + G+ + K
Sbjct: 377 ELCYQLSGILMHQGVGTSGGHYICHLKDDVSGKWYKFDDETVEEIELKNLGKDGKNGRRK 436
Query: 88 VVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKED 147
+ E ++ + V + +N +HL + +N + N + L+ L ++
Sbjct: 437 --KQEGIISSSTAYMVSYSKKNREVIHLEE----DPNNPLKSHKNLSKRLLKRLEEMEDT 490
Query: 148 SKRKDVVHDVNNMEIESEMIFFNDDI----FLPSHL--GKDIKELNRSYLDGCEQFKLRK 201
D+ E E + + D I L HL +D +G +++
Sbjct: 491 FVSNKSTFDI---EFEKMRLLWKDRIDSYQKLEPHLQVKQDFDFEEDDSDEGTDEY---- 543
Query: 202 NRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHG 261
ER + +S+L + +YWI ++WL+ W S +DN+++QC HG
Sbjct: 544 --------ERYAKKQSILDQIT----NSEYYWIDTEWLKNWIQG-HSSPIDNSNLQCPHG 590
Query: 262 KVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKS 321
+ +K+ SMKRISS+ W + + NGGP+ C CL +C+ + + +
Sbjct: 591 FLNPNKLESMKRISSQGWIMLYSEMNGGPSFNQSSVCNECLY-----FLCSQT--KEKAN 643
Query: 322 LKGLADDVLS----------------GKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGP 365
+K + D ++S YY+SK+W W ++ + + SE P
Sbjct: 644 VKNIKDHLISVEKKKIKLADNSNSNDNNNNNQQYYISKNWFNNW-KKSSQNQYSEV--SP 700
Query: 366 TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC 425
T I CPH L RLLV + W ++ P+ + F + +C C
Sbjct: 701 TYDISCPHDGL---NLDTKDRLLVQKETWDHLFSKY----PN----SNVFSSQTAQCILC 749
Query: 426 S--DALSEVACLEDSIRARKLKERQNHEKLAL-----GKSIPLSLDCKYYLLPSTWLTKW 478
+ D L + + + K +++ + LAL K P + +Y ++P WL W
Sbjct: 750 TEKDDLM-LDKINSQVTLSKEVKKEMKDLLALISNKNNKKRPNIKEGEYCVVPKDWLVSW 808
Query: 479 -RNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPD---LVCKR--GSIYQKGSA 532
+ ++P N IE ++ + E+ + +P D +CK G IY +A
Sbjct: 809 EESVLNPDKINEDEIESNDVNKEEGKEEKEESQENIIKPIDNSEFICKEHSGFIYNLDNA 868
Query: 533 T 533
+
Sbjct: 869 S 869
>gi|126328463|ref|XP_001366380.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Monodelphis
domestica]
Length = 1036
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 308 KKKLNTYIGFSELLDMEPYMEHKEGI-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ S V P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKSSLTVQV----------------------PAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP L C
Sbjct: 497 WLDESTPTKPIDNHACLCAHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLNVKALCKD 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K + L + G EG ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKNQLNEDYKIVTNLLKTNVKG--TEG-FWVGKSSLRSW-RQLALEQLDE 612
Query: 361 AD 362
D
Sbjct: 613 QD 614
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L ++++ + ATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLNDDTATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|358411151|ref|XP_001789640.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1 [Bos
taurus]
Length = 984
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 58/369 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 408
Query: 122 NGSNVERFTSNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ R++ + I +P+ L
Sbjct: 409 --------CSRNAYMLVYRLQTRERPGTP-----------------------IQVPAFLQ 437
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 438 ELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 495
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 496 KWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCK 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+++ + + + K++ L + ++V KS L+ W R+ L+
Sbjct: 556 ECVVERCRVLRLKNQLNEDYKTVNNLLKATVKSS---DGFWVGKSSLRSW-RQLALEQLD 611
Query: 360 EADGGPTTS 368
E DG S
Sbjct: 612 EQDGDADQS 620
>gi|358411147|ref|XP_003581941.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2 [Bos
taurus]
Length = 1036
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 58/369 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 408
Query: 122 NGSNVERFTSNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ R++ + I +P+ L
Sbjct: 409 --------CSRNAYMLVYRLQTRERPGTP-----------------------IQVPAFLQ 437
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 438 ELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 495
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 496 KWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCK 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+++ + + + K++ L + K +G ++V KS L+ W R+ L+
Sbjct: 556 ECVVERCRVLRLKNQLNEDYKTVNNLLKATV--KSSDG-FWVGKSSLRSW-RQLALEQLD 611
Query: 360 EADGGPTTS 368
E DG S
Sbjct: 612 EQDGDADQS 620
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +++ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|440897832|gb|ELR49443.1| Ubiquitin carboxyl-terminal hydrolase 48, partial [Bos grunniens
mutus]
Length = 992
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 58/369 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 264 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 322
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 323 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 364
Query: 122 NGSNVERFTSNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ R++ + I +P+ L
Sbjct: 365 --------CSRNAYMLVYRLQTRERPGTP-----------------------IQVPAFLQ 393
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 394 ELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 451
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 452 KWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCK 511
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+++ + + + K++ L + K +G ++V KS L+ W R+ L+
Sbjct: 512 ECVVERCRVLRLKNQLNEDYKTVNNLLKATV--KSSDG-FWVGKSSLRSW-RQLALEQLD 567
Query: 360 EADGGPTTS 368
E DG S
Sbjct: 568 EQDGDADQS 576
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +++ +CATL L
Sbjct: 890 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLSDDCATLGTL 949
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 950 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 989
>gi|359063424|ref|XP_002685768.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1 [Bos
taurus]
Length = 984
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 58/364 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 408
Query: 122 NGSNVERFTSNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ R++ + I +P+ L
Sbjct: 409 --------CSRNAYMLVYRLQTRERPGTP-----------------------IQVPAFLQ 437
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 438 ELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 495
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 496 KWLDESTPTKPIDNHACLCSHDKLHPDKIPIMKRISEYAADIFYSRYGGGPRLTVKALCK 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+++ + + + K++ L + ++V KS L+ W R+ L+
Sbjct: 556 ECVVERCRVLRLKNQLNEDYKTVNNLLKATVKSS---DGFWVGKSSLRSW-RQLALEQLD 611
Query: 360 EADG 363
E DG
Sbjct: 612 EQDG 615
>gi|359063418|ref|XP_003585840.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2 [Bos
taurus]
Length = 1036
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 58/369 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 408
Query: 122 NGSNVERFTSNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ R++ + I +P+ L
Sbjct: 409 --------CSRNAYMLVYRLQTRERPGTP-----------------------IQVPAFLQ 437
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 438 ELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 495
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 496 KWLDESTPTKPIDNHACLCSHDKLHPDKIPIMKRISEYAADIFYSRYGGGPRLTVKALCK 555
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
C+++ + + + K++ L + ++V KS L+ W R+ L+
Sbjct: 556 ECVVERCRVLRLKNQLNEDYKTVNNLLKATVKSS---DGFWVGKSSLRSW-RQLALEQLD 611
Query: 360 EADGGPTTS 368
E DG S
Sbjct: 612 EQDGDADQS 620
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +++ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|355728111|gb|AES09419.1| ubiquitin specific peptidase 48 [Mustela putorius furo]
Length = 1035
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 162/363 (44%), Gaps = 56/363 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ + I +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPTTA----------------------IQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + K++ L + ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRVLRLKSQLNEDYKTVNNLLKATVX---XXDGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADG 363
DG
Sbjct: 613 QDG 615
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 934 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>gi|355557640|gb|EHH14420.1| hypothetical protein EGK_00342, partial [Macaca mulatta]
Length = 1008
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 78/402 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 280 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 338
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 339 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 381
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 382 ---------SRNAYMLVYRLQTQEKP----------------------NTAVQVPAFLQE 410
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 411 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 468
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 469 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 528
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTY---YVSKSWLQQWTRRKNLDA 357
C+++ + + + K++ L + G + + T+ ++ L + D
Sbjct: 529 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGYVAQRTFSSLFIENRKLGSLEQLDEQDG 588
Query: 358 PSEADGGPTTS-----------------------IRCPHGQL 376
+E G I CPHG+L
Sbjct: 589 DAEQSNGKMNGSTLNKDESKEERKEEEELNFNEDILCPHGEL 630
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 906 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 965
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 966 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1005
>gi|355744998|gb|EHH49623.1| hypothetical protein EGM_00313, partial [Macaca fascicularis]
Length = 1007
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 168/402 (41%), Gaps = 78/402 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 279 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 337
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 338 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 380
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 381 ---------SRNAYMLVYRLQTQEKP----------------------NTAVQVPAFLQE 409
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 410 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 467
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 468 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 527
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTY---YVSKSWLQQWTRRKNLDA 357
C+++ + + + K++ L + G + + T+ ++ L + D
Sbjct: 528 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGYVAQRTFSSLFIENRKLGSLEQLDEQDG 587
Query: 358 PSEADGGPTTS-----------------------IRCPHGQL 376
+E G I CPHG+L
Sbjct: 588 DAEQSNGKMNGSTLNKDESKEERKEEEELNFNEDILCPHGEL 629
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 905 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 964
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 965 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1004
>gi|187608155|ref|NP_001120167.1| ubiquitin specific peptidase 48 [Xenopus (Silurana) tropicalis]
gi|166796872|gb|AAI59175.1| LOC100145207 protein [Xenopus (Silurana) tropicalis]
Length = 1039
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 158/351 (45%), Gaps = 59/351 (16%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M L + + Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 308 KKKLNTYIGFSETLDMDPYLDQ-TDGTYSYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSS--SGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSE 119
++F+DE + + G SK +P + +
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLEQSKTAPRKPKCGKGIH------------------- 407
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
S +AYML+Y L+ +++DV +V P+ L
Sbjct: 408 ----------CSRNAYMLVYRLK----TVEKQDVTFEV------------------PAFL 435
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
K ++ N + + C + + +D + +EV+ L P + + + ++ +WL
Sbjct: 436 QKLVELDNCKFEEWCVEMVDMRRESVDKGKAKHEEVKELYQRLPAGA-DSAYEFVPLEWL 494
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN+ C HGK+ KI MKRIS A + F+ +Y G P LT+D C
Sbjct: 495 QKWLDESTPTKPIDNSKCLCSHGKLHPDKISLMKRISQHAADIFYKRYGGSPRLTDDALC 554
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
C+++ + + + KSL + L + EG +++ KS L++W
Sbjct: 555 KDCVVERCRVLRLKNQLNEDYKSLTNMVK--LPVESNEG-FWIGKSSLRRW 602
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL +L
Sbjct: 937 RRSTRHRKVRGERALLVSANQTLKELKIQIMHAFSVAPFDQNLSIEGKILSDDAATLGNL 996
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
I P + ++ E +AD + D M V EEGF+GT L
Sbjct: 997 GIVPESVILLKADE-----PMADYAAMDDVMQVCMPEEGFKGTGL 1036
>gi|119331114|ref|NP_001073211.1| ubiquitin carboxyl-terminal hydrolase 48 [Gallus gallus]
gi|75571442|sp|Q5ZM45.1|UBP48_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 48; AltName:
Full=Deubiquitinating enzyme 48; AltName: Full=Ubiquitin
thioesterase 48; AltName:
Full=Ubiquitin-specific-processing protease 48
gi|53127738|emb|CAG31198.1| hypothetical protein RCJMB04_3d5 [Gallus gallus]
Length = 1033
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 306 KKKLNTYIGFSELLDMEPFMEQKNGV-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 364
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 365 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 407
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ K + +V P+ L +
Sbjct: 408 ---------SRNAYMLVYRLQ-----TREKSLTVEV------------------PAFLQE 435
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + + + +EV+ L P + P+ +IS +WL++
Sbjct: 436 LVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEA-GSPYDFISLEWLQK 494
Query: 242 WADK-IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P +DNT+ C HGK+ KI MKRIS + F+ +Y GGP L C
Sbjct: 495 WLDESTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYRRYGGGPRLNVKALCKD 554
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G EG ++V K+ L+ W R+ L+ +E
Sbjct: 555 CVVERCRILRLKNQLNEDYKTVTNLLKITVKGS--EG-FWVGKASLRSW-RQLALEQLNE 610
Query: 361 AD 362
D
Sbjct: 611 QD 612
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL L
Sbjct: 931 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLLIDGKILSDDTATLGSL 990
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
I P + ++ E IAD + D M V EEGF+GT L
Sbjct: 991 GIIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1030
>gi|297282420|ref|XP_002808322.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 48-like [Macaca mulatta]
Length = 1032
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 52/341 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTAVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYV 341
C+++ + + + K++ L + G + + Y+
Sbjct: 557 CVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGYVGKAGXYL 597
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 930 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 989
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 990 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1029
>gi|449486638|ref|XP_004175450.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 48-like [Taeniopygia guttata]
Length = 977
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 164/362 (45%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 249 KKKLNTYIGFSELLDMEPFMEQKNGV-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 307
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 308 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 350
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ K + V P+ L +
Sbjct: 351 ---------SRNAYMLVYRLQ-----AREKSLTVQV------------------PAFLQE 378
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + + + +EV+ L P + P+ +IS +WL++
Sbjct: 379 LVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEA-GSPYDFISLEWLQK 437
Query: 242 WADK-IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P +DNT+ C HGK+ KI MKRIS + F+ +Y GGP L C
Sbjct: 438 WLDESTPPKPIDNTACLCSHGKLHPDKISLMKRISEYVADFFYRRYGGGPRLNVKALCKD 497
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V K+ L+ W R+ L+ +E
Sbjct: 498 CVVERCRILRLKNQLNEDYKTVTNLLKMTVKGN---DGFWVGKASLRSW-RQLALEQLNE 553
Query: 361 AD 362
D
Sbjct: 554 QD 555
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL L
Sbjct: 875 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVXPFDQNLSLEGKILSDDTATLGSL 934
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 935 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 974
>gi|449266513|gb|EMC77565.1| Ubiquitin carboxyl-terminal hydrolase 48, partial [Columba livia]
Length = 998
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 168/365 (46%), Gaps = 62/365 (16%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 270 KKKLNTYIGFSELLDMEPFMEQKNGV-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 328
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G K+ G E D+ PS
Sbjct: 329 YKFNDEDIEKM-----------EGKKLQL--------------GIEE---DLAEPSKSQT 360
Query: 122 NGSNVERFT--SNDAYMLMYNLR-RDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSH 178
+ T S +AYML+Y L+ R+K + I +P+
Sbjct: 361 RKPKCGKGTHCSRNAYMLVYRLQSREKSPT------------------------IEVPAF 396
Query: 179 LGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDW 238
L + ++ N + + C + + + + + +EV+ L P + P+ +IS DW
Sbjct: 397 LQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYKRLPAEA-GSPYDFISLDW 455
Query: 239 LRQWADK-IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDY 297
L++W D+ P +DN++ C HGK+ KI MKRIS + F+ +Y GGP L
Sbjct: 456 LQKWLDESTPPKPIDNSACLCSHGKLHPDKIPIMKRISEYVADFFYRRYGGGPRLNVKAL 515
Query: 298 CMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDA 357
C C+++ + + + K++ L + G +G ++V K+ L+ W R+ L+
Sbjct: 516 CKDCVVERCRILRLKNQLNEDYKTVTNLLKVTVKG--TDG-FWVGKASLRSW-RQLALEQ 571
Query: 358 PSEAD 362
+E D
Sbjct: 572 LNEPD 576
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ LK+ I + V +Q L +++ + ATL L
Sbjct: 896 RRSTRHRKVRGEKALLVSANQTLKDLKIQIMHAFSVAPFDQNLSIDGKVLSDDTATLGSL 955
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 956 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 995
>gi|326932625|ref|XP_003212415.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 48-like [Meleagris gallopavo]
Length = 1041
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 314 KKKLNTYIGFSELLDMEPFMEQKNGV-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 373 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 415
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ K + +V P+ L +
Sbjct: 416 ---------SRNAYMLVYRLQ-----TREKSLTVEV------------------PAFLQE 443
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + + + +EV+ L P + P+ +IS +WL++
Sbjct: 444 LVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEA-GSPYDFISLEWLQK 502
Query: 242 WADK-IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P +DNT+ C HGK+ KI MKRIS + F+ +Y GGP L C
Sbjct: 503 WLDESTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYRRYGGGPRLNVKALCKD 562
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V K+ L+ W R+ L+ +E
Sbjct: 563 CVVERCRILRLKNQLNEDYKTVTNLLKITVKGS---DGFWVGKASLRSW-RQLALEQLNE 618
Query: 361 AD 362
D
Sbjct: 619 QD 620
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL L
Sbjct: 939 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSINGKILSDDTATLGSL 998
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLL 764
+ P + ++ E D++S M EEGF+GT L
Sbjct: 999 GVIPESVILLKADEPIADYAAMDDVSPVCM----PEEGFKGTGL 1038
>gi|426328221|ref|XP_004024898.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 48 [Gorilla gorilla gorilla]
Length = 1047
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 45/341 (13%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+LSAVLIH+G + SGHYIA +KD +G+W++F+DE + + G K
Sbjct: 335 VYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQLGIEEDLGKTF 394
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTS-NDAYMLMYNLRRDKEDS 148
+++ LP G + F + Y++ + RD S
Sbjct: 395 KAQ--------------------TFLPKCX--QGDHSWNFCQCFNQYLIXF---RDXHGS 429
Query: 149 KRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCI 208
+ +++ + FF +F + L + + N + + C + + + +D
Sbjct: 430 -----------LYLKTRIKFFVF-LFXIAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKG 477
Query: 209 SERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST-LDNTSIQCLHGKVPESK 267
+ +EV+ L P + EP+ ++S +WL++W D+ P+ +DN + C H K+ K
Sbjct: 478 KAKHEEVKELYQRLPAGA--EPYEFVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDK 535
Query: 268 IGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLAD 327
I MKRIS A + F+ +Y GGP LT C C+++ + + + K++ L
Sbjct: 536 ISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRILRLKNQLNEDYKTVNNLLK 595
Query: 328 DVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTS 368
+ G ++V KS L+ W R+ L+ E DG S
Sbjct: 596 AAVKGN---DGFWVGKSSLRSW-RQLALEQLDEQDGDAEQS 632
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 945 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 1004
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1005 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1044
>gi|307104616|gb|EFN52869.1| hypothetical protein CHLNCDRAFT_54183 [Chlorella variabilis]
Length = 1348
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 193 GCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIF----P 248
G E + K + L+ +R++EVR ++ A +P +++SDWL WAD P
Sbjct: 461 GAEAYAAAKQQLLERQKQRQEEVRGIVEAAAQLEEGDPGRFVASDWLTAWADAGVEAGAP 520
Query: 249 STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHT 308
+DN + C H K+ +K+ + +RIS+ AW + +Y GGP L D C TCL
Sbjct: 521 QPVDNAPLLCPHNKLDPAKLAAARRISTPAWEQLRGRYCGGPELGPGDACPTCLAAFLDH 580
Query: 309 VVCADSYRDRRKSLKGLADDVLS----GKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGG 364
+V + + ++ +A VL+ G+ E ++VS WL W +++ S
Sbjct: 581 IVAKEDTQGLKEHFMAVAAAVLAGEGEGQGQEPAFFVSMPWLNAWLKQRK---GSMGGTH 637
Query: 365 PTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
PT I CP G+L PE + +R+ +PE W F+
Sbjct: 638 PTKDITCPCGRLAPESS-KTRRVGIPEDFWRFL 669
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 606 TFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAP----------------RSI- 648
T P +C+ + ER++ L+Y +++++V LV E R++
Sbjct: 1118 TDPPLCQQAVAERQARLRAALLSYANEEVAVELVASAEEAVAAGEAAAGAGEHGSARALC 1177
Query: 649 LEASESMFEPDRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILH---- 704
+ + +R SKR+RK R+ V+ VS+ ++ QL+ + +SL V N L
Sbjct: 1178 MSGRGTQLPASQRKSKRARKGRACVS--VSSGDTLQQLRYHVLQSLDVHPRNAQLFVRCC 1235
Query: 705 ---KGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIAD---ELSDQKMNVQHVEEG 758
G + + ATLA+ I+P D++ V DS H+ D+A + + + E G
Sbjct: 1236 LGAGGAPLTQGDSATLAECEIYPQDEIKVVDSGEHDASDLASLFPAYAGKARRPREAERG 1295
Query: 759 FRGTLLTS 766
F GT LT
Sbjct: 1296 FTGTALTG 1303
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 415 FPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTW 474
FP+ EC C+ L E + ++ R +E+ + L ++ L Y L+P+ +
Sbjct: 844 FPVWRGECGVCAGHLREASNALKGLQGRLAEEKAELQHLLQPQAAALVPGASYRLVPAAF 903
Query: 475 LTKWRNYI--------SPSGKNASSIEPEILDGVIDSLKCE 507
+ +WR Y+ SPS K A ++P L + + CE
Sbjct: 904 MARWRAYMQQAGKRALSPSSKAAQIVQPPDLAEAMLGVLCE 944
>gi|389748655|gb|EIM89832.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 1215
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 201/863 (23%), Positives = 326/863 (37%), Gaps = 170/863 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQ--LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTG 59
+KK +P L+M R L P Q D IYDL VL+HKG + SGHY AL D
Sbjct: 369 RKKSKHNISYPTVLDMNRFLHPPGQSSPDNIYDLQGVLLHKGPSAYSGHYEALAFDTVNN 428
Query: 60 QWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVS-----ERVEGANENHVDVH 114
W++F+DE V+ + GS ++G++ P + R++ +++ V V
Sbjct: 429 SWFQFNDESVTKMK----APGSKANGTQDKPKGPQANGRANAGRKKRRIDDSDDEVVIVS 484
Query: 115 LPSS-----EYYNGSNVERFTSNDAYMLMYNLRRDKED----------SKRKDVV----- 154
P S Y+ TS DAYML+Y R S+ D V
Sbjct: 485 EPPSGQPKPTPYSSPEASYATSKDAYMLVYTRRTTARTEAKPPVPTPPSRALDAVQALIA 544
Query: 155 -HDVNNMEIES---------EMIFFN-DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNR 203
HD E + E ++ N I+ H+ D ++ + E F R R
Sbjct: 545 EHDKACAEFKEKRRAAREKFEELYSNMTSIYRTWHVSSDEQKSIVASQQALELFLSRHLR 604
Query: 204 ELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPS-----TLDNTS--- 255
+ ++ + L EA P+ E +S D + + PS T+ T+
Sbjct: 605 KDPPKEQKADKPPELKPEAKAPANGE----VSLDKSTERVNGHLPSPGTTPTVSETNGYI 660
Query: 256 -------------IQCLHGKVPESKIGSMKRISSKAWNKFFF--KYNGGPALTNDDYCMT 300
+ C HG + K MKRI A+ K + P LT D C
Sbjct: 661 DPEASTPDISISDVVCPHGLLNPHKADDMKRIDYVAYTKLMSLEECRFVPELTPYDVCRD 720
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRK-NLDAPS 359
C+ + + Y+ L + V+ +G Y++S WL+ W K + S
Sbjct: 721 CVTE----MFIEKLYQYEHPKLVSEFEAVMKPMEGQGWYWISTKWLRDWKAPKPKMHVIS 776
Query: 360 EADGGPTT-----SIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCST 414
+ D P ++ CPHG L E + + PE L K+ P T
Sbjct: 777 QGDPPPDAEPFKENVSCPHGNL--EITLTYRTQISPEAYRLL-----KKLYPQ----WET 825
Query: 415 FPLDSEECPECSDALSEVACLEDSIRA--RKLKERQNHEKLALGKSIPLSLDCKYYLLPS 472
++ C C +A +V E+ IR+ K+K + +E + L D L+P+
Sbjct: 826 LSYTAQRCSTC-EAGKDVQ-KEERIRSEQEKMKLKHMYENALGPNNTRLLQDVPCALVPA 883
Query: 473 TWLTKWRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSA 532
+ W+ YI K PE+LD VC+ G + ++
Sbjct: 884 DFARTWKQYIYRPMKYP---RPEMLDTTC-----------------FVCEHGKLNIDPNS 923
Query: 533 TD---GLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGP 589
D + +V +DW E + ++ G + E P
Sbjct: 924 NDLDSTICVVRRDDWDALAEMY--------------------DVTGPIIAVTRHETP--- 960
Query: 590 RDEENNEIESQRPVVRTFPEICEDCIGERES----CELMQKLNYCD--KDISVFLVRGKE 643
+E EI S V P +CE+C R+S E+ ++ D G
Sbjct: 961 --DEQREIRSS--FVHDIP-VCEECRRTRKSDFDLTEITIRMLSADDPNPTPESFTNGHL 1015
Query: 644 AP-----------RSILEASESMFEPDRRASKRSRKT-RSFVNLKVSASTSIYQLKMMIW 691
P SI S+ +R SKR R T R L +S + ++ ++K+++
Sbjct: 1016 KPSASSSTQPGHQTSITTYSKKGTNGPQRQSKRIRTTQRKEQKLAISKNMTVKEIKLLLQ 1075
Query: 692 ESLGVVKENQ-ILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIA-DELSDQK 749
+ + + Q + ++G ++D + AT+A L + D ++ E+ E D+ D +D+
Sbjct: 1076 DDMDIPTICQRLFYQGHELLDNQ-ATVATLGVLSNDIFDLR--EVKEDEDLLNDSDTDRP 1132
Query: 750 MNVQHVEEG--FRGTLLTSNLSS 770
+ EEG F GTLL + SS
Sbjct: 1133 PTKRRREEGRAFGGTLLAGDFSS 1155
>gi|351704163|gb|EHB07082.1| Ubiquitin carboxyl-terminal hydrolase 48 [Heterocephalus glaber]
Length = 723
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 58/352 (16%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+KKK+ + F L+M + +Y+LSAVLIH+G + SGHYIA +KD +G+
Sbjct: 306 LKKKLNTYIGFSETLDMDPYVDHKPG-SYVYELSAVLIHQGVSAYSGHYIAQVKDPQSGK 364
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W++F+ E + + G ++ +S+ R++ H
Sbjct: 365 WYKFNYEDMEKMEGKKLQLGIEEDLAEPSKSQTC-------RLKCGKGTHC--------- 408
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
S +AYML+Y L+ ++ N + +P+ L
Sbjct: 409 ----------SQNAYMLVYGLQSQEKP----------------------NWTVEVPAFLQ 436
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + N + C ++RK R +D + +EV+ L P + EP+ ++S +WL+
Sbjct: 437 ELVDCDNAKFEAWC--IEMRK-RRVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQ 491
Query: 241 QWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
+W D++ P+ +DN + C H K+ KI MKRIS + F+ +Y GGP LT
Sbjct: 492 KWLDELTPTKPIDNHTSLCSHDKLHPDKISIMKRISKYVADIFYSRYGGGPRLTVKALGK 551
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTR 351
C+++G + + K + L G + ++V KS L+ W +
Sbjct: 552 KCVVEGCRVLHLKNQLNKDYKMVNNLLKATRKG---DDGFWVGKSSLRSWCQ 600
>gi|427788575|gb|JAA59739.1| Putative ubiquitin carboxyl-terminal hydrolase [Rhipicephalus
pulchellus]
Length = 996
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 181/459 (39%), Gaps = 96/459 (20%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+KI + F L++ L +P ++Y L AVLIH+G++ NSGHY+A IKD +G W+
Sbjct: 322 RKINTALQFTETLDLSAHLRKPPG-SMVYTLMAVLIHQGSSANSGHYVAHIKDRTSGSWY 380
Query: 63 EFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYN 122
F+D+ V + + P + G++ D P
Sbjct: 381 LFNDDGVCKMRGRHLQLNTDEEN------------PTRAQSTGSD----DASEPPKRLAK 424
Query: 123 GSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKD 182
G++ S AYML+Y + +S D D F L K
Sbjct: 425 GTH----DSTGAYMLVYQ-KSGHTNSFPPD------------------QDPFWAYALPKI 461
Query: 183 IKEL----NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDW 238
++E N + + + ++ +++EVRSL + PV EP WI++DW
Sbjct: 462 VQEALDTDNAVFEQWVAEMDAMRADKVSAGRAQQKEVRSLYEQLPVIE-GEPVDWITTDW 520
Query: 239 LRQW--ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDD 296
L +W DK +DN+++ C H + + +K ISS+A + + KY GGP L +
Sbjct: 521 LIKWLAQDKEPVPPVDNSAVLCTHSLLDPQHVSKVKCISSRAADLIYQKYGGGPRL-REA 579
Query: 297 YCMTCLIDG-----AHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTR 351
C +C++ AHT V D R+ + LK E + +V K L W +
Sbjct: 580 LCASCVVQQCRYLRAHTRV-QDDQRNISRLLK------FKPSSTESSMWVGKQSLLWWRK 632
Query: 352 --RKNLDAPSEADGGPTTS-----------------------IRCPHGQLMPEKAGGAKR 386
+ +PS+ G T I CPHG L P K R
Sbjct: 633 LAMAQVASPSQETNGNDTGPIEDDSDTTLPPVSAATFSFNEDICCPHGGLNPNK---NIR 689
Query: 387 LLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC 425
LV +W + FP +E+C +C
Sbjct: 690 RLVSMDVWTLLK--------GHFPSAPQFPESTEDCQQC 720
>gi|321457258|gb|EFX68348.1| hypothetical protein DAPPUDRAFT_63211 [Daphnia pulex]
Length = 1069
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 243/571 (42%), Gaps = 112/571 (19%)
Query: 1 MKKKITSPFCFPGELNMQRRLS----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
+KKK++S FP + M + EPS L YDLSAVLIH+G + SGHYIA IKD
Sbjct: 308 LKKKVSSMVHFPFVVEMSNYVKTQGEEPSSL--TYDLSAVLIHRGPSAYSGHYIAHIKDP 365
Query: 57 NTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLP 116
TG W++F+DE V + F G + E +E + ++
Sbjct: 366 VTGTWYKFNDEVVQKIEGTNFKLG------------------IEEDLEDSKKSRA----- 402
Query: 117 SSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLP 176
++ GS+ S++AYML+Y+ RRD + +++ + LP
Sbjct: 403 GAKVTKGSH----GSSNAYMLVYS-RRDAAKPESVPACSTTSSLSDPCSV--------LP 449
Query: 177 SHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISS 236
+ I N ++ R++ L E+ ++R L P SL++ + + +
Sbjct: 450 PWVQTTIFNENENFEAWTRDTVSRRDESLKKSREKHSKMRRLYGSLPCNSLDQGEF-VPT 508
Query: 237 DWLRQWA---DKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
WL W +K+ P +DN+ + C HGK+ K K +SS A ++ + +Y+GG L
Sbjct: 509 QWLSSWLGNDEKLRP--IDNSILLCEHGKLNPEKFREYKLVSSSAADELYAEYSGGRRLN 566
Query: 294 NDDYCMTCLIDGAHTVVCADS-YRDRRKSLKGLADDVLSGKL--VEGTYYVSKSWLQQWT 350
++D C C+ T C S R + + L ++L K+ + +++ K L+ W
Sbjct: 567 SNDLCWDCV-----TTKCITSQLRSQLDNESKLIANLLKSKIDPNQPAFWIGKESLRSWK 621
Query: 351 R----------RKNL----------DAPSEADG----GPTTSIRCPHGQLMPEKAGGAKR 386
+ R+++ + PS A G + CPH +L A R
Sbjct: 622 KMVLERMVNSERESMKVKNGTLEWENRPSSASSVGEIGFNEDLLCPHDKLT---ADEGPR 678
Query: 387 LLVPEILWLFI---YEDAMKVKPDD------LLGCSTFPLDSEECPECSDALSEVACLED 437
L+ +W + + +A++ + ++ PL ++E A+ + + L+D
Sbjct: 679 RLIHSAVWEILHRHFPEAIEFSSSEPPCEKCIVNIERTPLPTKESNRLL-AMEQKSLLQD 737
Query: 438 SIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEIL 497
R++ + +K + Y++ + KWR+++ +++S EP +
Sbjct: 738 LFRSKNRPDPFAEQKGEI------------YVIAKEVIDKWRSFV----RDSSRKEP-VT 780
Query: 498 DGVIDSLKCEKHLRLLERP-PDLVCKRGSIY 527
L C H LL RP PDL + +Y
Sbjct: 781 CMSNAQLLCH-HGGLLHRPSPDLESESMFVY 810
>gi|327291173|ref|XP_003230296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like, partial
[Anolis carolinensis]
Length = 506
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 53/293 (18%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + Y+LSA+LIH+G + SGHYIA +KD T +W
Sbjct: 266 KKKLNTYIEFSDLLDMEPFMEDKGG-HFTYELSAILIHRGVSAYSGHYIAHVKDPQTAEW 324
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+ F+DE + + G K+ GA E+ + +
Sbjct: 325 YRFNDEEIEKM-----------EGKKLQL--------------GAEEDLEPSKSQARKPK 359
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
G V R S +AYML+Y L+ S+ K + D+ P+ L +
Sbjct: 360 GGKGVYR--SRNAYMLVYRLQ-----SRAKSLTTDI------------------PAFLKE 394
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + + + +EV+ L + P + +P+ ++S +WL+Q
Sbjct: 395 LVERDNSKFEEWCAEMAEMRQQSVARGKVKHEEVKELYQKLPAKA-GDPYDFVSLEWLQQ 453
Query: 242 WADKIF-PSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
W D+ P +DN C HGK+ K+ ++KR+S+ + F+ +Y GGP LT
Sbjct: 454 WLDEAAAPKPVDNRPCLCPHGKLNPDKVPAIKRVSATVADYFYQRYGGGPRLT 506
>gi|405970744|gb|EKC35620.1| Ubiquitin carboxyl-terminal hydrolase 48 [Crassostrea gigas]
Length = 2166
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 160/376 (42%), Gaps = 81/376 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLS---------EPSQLDLIYDLSAVLIHKGTAVNSGHYIAL 52
KKK+ FP L+M + ++ Q IY L AVLIH+G + SGHYIA
Sbjct: 1388 KKKLNGFIQFPETLDMSKFMTSNGNHTHNDNSPQSGSIYRLKAVLIHRGPSAYSGHYIAH 1447
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD 112
I DE++G W++F+DE + + GS + Q S + +G
Sbjct: 1448 ILDESSGVWYKFNDEETTKM-----------KGSNLHLGTEEDLQETSAKQKGK------ 1490
Query: 113 VHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD 172
+P + +S +AYML+Y + E+ KD V D+ D
Sbjct: 1491 --VPKGYH---------SSRNAYMLVYTRQMPMEE---KDKVIDLK----------MPDK 1526
Query: 173 IFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFY 232
+LP ++ +K+ N ++ + + + + ++ E+++E+R S V + ++ +
Sbjct: 1527 SYLPHYMLDYVKKDNENFEMWVAELLMMREQNIESGKEKQEEIRQTFSRLVVGTEDQEIH 1586
Query: 233 ---WISSDWLRQW-ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG 288
WIS WL W D ++N C HGK+ + G MK + A N + KY G
Sbjct: 1587 NYEWISLPWLSHWLEDPGKAKPVNNEMALCQHGKLHPDRAGKMKCVQYDAVNSLYEKYQG 1646
Query: 289 GPALTNDDYCMTCLIDGAHTVVCADS----YRDRRK---------SLKGLADDVLSGKLV 335
GP L D TCLI C S R +RK ++K + D +
Sbjct: 1647 GPRLPGDK--ATCLI-------CVRSRCKVLRTKRKMIEDEKLFSTMKKMEDPI-----A 1692
Query: 336 EGTYYVSKSWLQQWTR 351
E +++V KS + W R
Sbjct: 1693 EPSFWVGKSSFRSWKR 1708
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 94/423 (22%)
Query: 373 HGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEV 432
HGQL P+ + +R L+PE LW+ + E PD C F C +C D E
Sbjct: 1804 HGQLDPDPS---RRKLIPEKLWIRLRE----YFPD----CPEFSSSHPVCQKCCDKNKEE 1852
Query: 433 ACLEDSIRARKLKERQNHEKLALGKSIPLSLDC--KYYLLPSTWLTKWRNYISPSGKNAS 490
+++ + ++ + + K P+ L + +++ ++ +WR ++ KN
Sbjct: 1853 TENQNTNKRLAQVQKADLADIFNNKKRPVKLVTGEEIFVVSLQFVEEWRRFVKDPVKNDP 1912
Query: 491 SIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEE 550
+E + + L CE H + + PP Q G+ LT +E + W +E
Sbjct: 1913 VLEVKNI-----RLLCE-HRKYMHPPP----------QNGA---DLTDNSEVVYLW-PQE 1952
Query: 551 WGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEI 610
+ + E +VD+ E +EE+N + V T PEI
Sbjct: 1953 FEKVMEH---FVVDY------------------EVSVVAYEEEDNSVH-----VITLPEI 1986
Query: 611 CEDCIGERESCELMQKLNYCDKDISVFL---VRGKEAPRSILEASESMFEPD-------- 659
C++C+ +RE+ +++ Y +D ++F+ V+ K+ S+ + + +PD
Sbjct: 1987 CQECLQQREN--MIEMAKYVYRDATIFVRKAVKDKQGDVSLDSSKQDYPDPDFCANDRRK 2044
Query: 660 -----------------RRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQI 702
R S+R RK R LK+S+ ++ LK+ + + V +Q
Sbjct: 2045 SESEEPPEKMQKLDGNSLRKSQRHRKVRGEKELKISSDQTLRDLKLQLMKLFSVPPFDQN 2104
Query: 703 LHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHV-EEGFRG 761
L + + ATL L + PGD + +Q E E + +L MNV V E GF+G
Sbjct: 2105 LTIAGVALADDKATLGSLRVAPGDVIMLQADEPVEDPGVLQDL----MNVSGVPEAGFKG 2160
Query: 762 TLL 764
T L
Sbjct: 2161 TGL 2163
>gi|226530828|ref|NP_001151693.1| UBP26 [Zea mays]
gi|195648953|gb|ACG43944.1| UBP26 [Zea mays]
gi|414885085|tpg|DAA61099.1| TPA: UBP26 isoform 1 [Zea mays]
gi|414885086|tpg|DAA61100.1| TPA: UBP26 isoform 2 [Zea mays]
Length = 92
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 66/79 (83%)
Query: 694 LGVVKENQILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQ 753
+ +VKENQ+LHKG I+ + ATLAD +IFPGD LWV+DSEI+E+RDIADE+S+QK ++
Sbjct: 6 IQIVKENQMLHKGSVEIEDDFATLADKSIFPGDFLWVRDSEIYENRDIADEISEQKDDML 65
Query: 754 HVEEGFRGTLLTSNLSSQV 772
EEGFRGTLLTS +S+Q+
Sbjct: 66 QAEEGFRGTLLTSTVSAQL 84
>gi|392595780|gb|EIW85103.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1136
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 181/824 (21%), Positives = 334/824 (40%), Gaps = 151/824 (18%)
Query: 2 KKKITSPFCFPGELNMQRRL-----SEPS-QLDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
+KK FP L+M + L EP+ Q IY+L VL+H+G++ GHY A + D
Sbjct: 374 RKKSKHNVLFPTVLDMGQFLKATKDGEPTPQGHDIYELRGVLLHRGSSAYHGHYEAQVFD 433
Query: 56 ENTGQWWEFDDEHV---SNLGHHPFG--------EGSSSSGSKVVRSEPVVCQPVSERVE 104
++ W++FDDE V +LG + G+ R P +P E E
Sbjct: 434 TSSRTWFQFDDEDVVSIQSLGEKKYTGKDMVDILNGNEDRKLSAARGRPSK-RPRLEESE 492
Query: 105 GANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIES 164
N P +++ +G + ++S DAYML+Y RK+ D ++ + S
Sbjct: 493 RENLK------PKNQHESGDQEDVYSSKDAYMLIY---------ARKE--SDTTSLSVGS 535
Query: 165 EMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
P I+E N ++ +K +++ + +++ +R + +
Sbjct: 536 ------TGPSPPEKAMAHIREGNECHMVTLASYKQKEDEAVARFVQQRSAMRDIFASWQT 589
Query: 225 PSLEEPFYWISSDWLRQWADKIF-----------PSTLDN-----TSIQCLHGKVPESKI 268
S +E + +S L W K F P +++ + I C H + K
Sbjct: 590 SSSDEESFVVSRQSLETWVAKPFAKSKNPQIDKEPLSIETEVEEVSDILCAHEGLDPRKA 649
Query: 269 GSMKRISSKAWNKFF--FKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLA 326
G+MKRI+++++ + F PA + + C TC+ H + Y+ +
Sbjct: 650 GNMKRINAQSYRRIADEFSDKISPAQSPESVCETCV----HDLFLEKLYQVEHPRMVSQL 705
Query: 327 DDVLSGKLVEGTYYVSKSWLQQWTRRK------NLDAPSEADGGP-TTSIRCPHGQLMPE 379
DD L E Y++SKSW++ W +K ++D P D P + C HG+L
Sbjct: 706 DDCCDDDLEEDGYWISKSWVKDWRLQKPKMHSLHVDVP--PDATPFRYHVLCEHGEL--S 761
Query: 380 KAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSI 439
+RL I A K+ P + CP C A S +ED
Sbjct: 762 LHASTRRL---------ISAKATKLLKTLFPSWQPLPSATGPCPICEAAHSNN--IEDKK 810
Query: 440 RARKLKERQNHEKLALGKSIPLSL-----DCKYYLLPSTWLTKWRNYISPSGKNASSIEP 494
ARK E + + + ++ + ++P+ ++ W+ ++S G S P
Sbjct: 811 EARKAAEEEKTQLRHMSENALAGNLLLLENVACAVIPTLFVRMWKQWLSRPG---DSHRP 867
Query: 495 EILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGI 554
+ +D + C KH +L P G + + ++ E+DW+ +
Sbjct: 868 DNVDNAM--FLC-KHDKLNFDP----------NSPGDMDNYVAVIQESDWRILSSLYKCG 914
Query: 555 KEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDC 614
E L+ K+++ EEP G + + V P +C++
Sbjct: 915 PEIALT-----------------KQVV--EEPEGVFETK---------FVHDIP-VCQE- 944
Query: 615 IGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTRSF-- 672
C L +K ++ ++++ L+ K++ + +++++ + R S+R R+ R
Sbjct: 945 ------CRLRRKTDFEYTELTIRLLHSKDSAKDT--STKNLSNSNTRQSRRIRQVRQRSG 996
Query: 673 -VNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNIFPGDKLWVQ 731
++ VS +T++ +K+MI + L + Q L ++ T+ L + D + ++
Sbjct: 997 KTHVMVSKATTVKDIKVMIQDDLKIPTICQKLFFHDLELEDSTTTMVALGVEINDCMDLR 1056
Query: 732 DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNL--SSQVV 773
+ + E D++D D + E GF GTLL S+L SSQ
Sbjct: 1057 EEK--ESGDLSDSSDDGGGRKRPKERGFGGTLLGSSLPGSSQTT 1098
>gi|328868754|gb|EGG17132.1| ubiquitin-specific protease 48-like protein [Dictyostelium
fasciculatum]
Length = 1056
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 31/295 (10%)
Query: 208 ISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHGKVPESK 267
++RK+++ ++ ++ V E+ +YWI +DWL W + +DN+ + C HG++ +K
Sbjct: 576 FNQRKEDINAIHNKLEVQEGEK-YYWIDTDWLSDWIKGQSVAPIDNSKLLCQHGQLAPNK 634
Query: 268 IGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCL---IDGAHTVVCADSYRDRRKSLKG 324
+ +MKRIS W+ + + GGP L D +C CL I G A+S +D+ +
Sbjct: 635 VETMKRISQVTWDFLYAAHQGGPVLDQDAHCQKCLYQIISGKKDHHNAESSKDQIIKSEN 694
Query: 325 LADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGA 384
+ G YY+SK W ++W+++ + D P I C HG L K
Sbjct: 695 QEKNRQEG------YYISKHWYKEWSKK--VVKQIVKDSTPVEDIICDHGGLSIVKED-- 744
Query: 385 KRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRARKL 444
++V W FI + K + + ST P C C E +SI+
Sbjct: 745 -MMIVKTETWSFI-QTHFAPKAES-IASSTTP-----CQTCLKLDKESTDQTNSIK---- 792
Query: 445 KERQNHEKL-ALGKSIPLSLDCK---YYLLPSTWLTKWRNYI-SPSGKNASSIEP 494
KER + L L KS + + K +Y +P W+ +W +I S K+ + + P
Sbjct: 793 KERSKLKTLITLIKSQKYNFNLKNGSFYFVPKEWINRWYKFIYSDKSKDENDVTP 847
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 2 KKKITSPFCFPGELNMQRRL---------SEPSQLDLIYDLSAVLIHKGTAVNSGHYIAL 52
KKK+ + FP E+++ + S LD Y+L+A+++HKG +++SGHYI
Sbjct: 416 KKKLHGNYTFPLEIDLSQYFNNNNNKEKSSTAMDLDHEYELTAIMMHKGLSISSGHYITH 475
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
+K++ TG+WWEFDDE V L G+ S
Sbjct: 476 VKNDLTGEWWEFDDEDVKKLSVEKIGKDS 504
>gi|242083438|ref|XP_002442144.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
gi|241942837|gb|EES15982.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
Length = 315
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FP +L++ +RLS PS YDL+A+L+HKGT NSGHY+A IKDE+ GQW
Sbjct: 232 KKKISSTFSFPRQLDLGKRLSNPSS-SCTYDLAAILVHKGTGANSGHYVAHIKDESNGQW 290
Query: 62 WEFDDEHVSNLGHHP 76
WEFDDE VS LG P
Sbjct: 291 WEFDDETVSKLGVQP 305
>gi|115451287|ref|NP_001049244.1| Os03g0192900 [Oryza sativa Japonica Group]
gi|113547715|dbj|BAF11158.1| Os03g0192900, partial [Oryza sativa Japonica Group]
Length = 89
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 76/89 (85%), Gaps = 2/89 (2%)
Query: 610 ICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKT 669
+CE+CIGE+ESC L++KLNY ++DI V+LVRGKEAP+SI EAS ++ PDRR SKRSR+T
Sbjct: 1 VCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSIREASAAVPVPDRRTSKRSRRT 60
Query: 670 R--SFVNLKVSASTSIYQLKMMIWESLGV 696
+ ++LKVS ST++YQLK+MIWESLGV
Sbjct: 61 TSGNSISLKVSGSTTVYQLKLMIWESLGV 89
>gi|427780107|gb|JAA55505.1| Putative ubiquitin carboxyl-terminal hydrolase [Rhipicephalus
pulchellus]
Length = 1026
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 173/434 (39%), Gaps = 97/434 (22%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL-GHHPFGEGSSSSGSK 87
++Y L AVLIH+G++ NSGHY+A IKD +G W+ F+D+ V + G H
Sbjct: 377 MVYTLMAVLIHQGSSANSGHYVAHIKDRTSGSWYLFNDDGVCKMRGRH------------ 424
Query: 88 VVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKED 147
++ P + G++ D P G++ S AYML+Y + +
Sbjct: 425 -LQLNTDEENPTRAQSTGSD----DASEPPKRLAKGTH----DSTGAYMLVYQ-KSGHTN 474
Query: 148 SKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKEL----NRSYLDGCEQFKLRKNR 203
S D D F L K ++E N + + +
Sbjct: 475 SFPPD------------------QDPFWAYALPKIVQEALDTDNAVFEQWVAEMDAMRAD 516
Query: 204 ELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW--ADKIFPSTLDNTSIQCLHG 261
++ +++EVRSL + PV EP WI++DWL +W DK +DN+++ C H
Sbjct: 517 KVSAGRAQQKEVRSLYEQLPVIE-GEPVDWITTDWLIKWLAQDKEPVPPVDNSAVLCTHS 575
Query: 262 KVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDG-----AHTVVCADSYR 316
+ + +K ISS+A + + KY GGP L + C +C++ AHT V D R
Sbjct: 576 LLDPQHVSKVKCISSRAADLIYQKYGGGPRL-REALCASCVVQQCRYLRAHTRV-QDDQR 633
Query: 317 DRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTR--RKNLDAPSEADGGPTTS------ 368
+ + LK E + +V K L W + + +PS+ G T
Sbjct: 634 NISRLLK------FKPSSTESSMWVGKQSLLWWRKLAMAQVASPSQETNGNDTGPIEDDS 687
Query: 369 -----------------IRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLG 411
I CPHG L P K R LV +W +
Sbjct: 688 DTTLPPVSAATFSFNEDICCPHGGLNPNK---NIRRLVSMDVWTLLK--------GHFPS 736
Query: 412 CSTFPLDSEECPEC 425
FP +E+C +C
Sbjct: 737 APQFPESTEDCQQC 750
>gi|108706628|gb|ABF94423.1| ubiquitin-specific protease 26, putative, expressed [Oryza sativa
Japonica Group]
gi|215740439|dbj|BAG97095.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 101
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 694 LGVVKENQILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQ 753
+ +VKENQ LHKG I+ + ATLAD IFPGD LWV+DSEI+E+RDIADE+S+QK+ VQ
Sbjct: 16 IQIVKENQELHKGSVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQ 75
Query: 754 HVEEGFRGTLLTSNLSSQV 772
EEGFRGTLLTS+ S+Q+
Sbjct: 76 -TEEGFRGTLLTSSASAQL 93
>gi|393233489|gb|EJD41060.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1143
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 162/839 (19%), Positives = 321/839 (38%), Gaps = 175/839 (20%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
++K FP ++M + L+ P + +YDL +L+HKG + + GHY + + D + +W
Sbjct: 350 RRKSKDTIKFPLSIDMGQYLT-PKRASCMYDLRGILLHKGGSAHHGHYESQVYDMSRKRW 408
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSER-VEGANENHVDVHLPSSEY 120
+ F+D+ V + + + + ++ S+P +P S V+ +++ V + P
Sbjct: 409 FNFNDDVVEEVD---IEQQAKKNATETSTSKPATKRPRSAVIVDSDDDDEVQIIEPPRVE 465
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
+N+ +S DAYML+Y ++R + D + M+++ E D P+
Sbjct: 466 ---NNINYISSRDAYMLVY--------ARRPENARDADAMDVDGEPAVKIPDP--PAEAQ 512
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
I E+N +++ C ++ R + + + R++ + L + S L
Sbjct: 513 AKIDEMNSAHIAQCSAYQDRLQKLDSQFAALRDSKRAIYRSWNIIDLADDSVIASRTALT 572
Query: 241 QWADKIFPST-----------------------------------------------LDN 253
+W ++ T +DN
Sbjct: 573 EWLERGLELTSAQGATRKRSSSDATTLDGDTDATAWDGMEKPADSPADAPPAEKLEEIDN 632
Query: 254 TSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG---GPALTNDDYCMTCLIDGAHTVV 310
+ I+C H ++ SK G MKRI+ A++ + G P D C C+ H
Sbjct: 633 SDIECWHRRLDPSKAGEMKRITKAAYDS-IVRSTGCIFQPLFRPQDVCEDCVEMTFHEKY 691
Query: 311 CADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWT-RRKNLDAPSEADGGPTTS- 368
A ++ + D L G ++SK+WL+ W + + P D P
Sbjct: 692 YAQAHPKLTEQFDEFCRDNLDET---GGVWISKAWLKDWKLKMPKMHKPGVDDPAPDAEE 748
Query: 369 ----IRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPE 424
++C HG L + R +P+ + + KP P E+CP
Sbjct: 749 FALHVKCEHGGL---NTNMSWRRKIPQKAAELLQTVFIDWKP--------IPATEEDCPV 797
Query: 425 CSDALSEVACLEDSIRARKLKERQNHEKLALGKSI----PLSLDCKYYLLPSTWLTKWRN 480
C L+ +A E+Q+ KL + ++ P +Y ++P++++ W
Sbjct: 798 CQVELNTSKLDRRQRQAEAENEKQHLSKLYIDENRLCENPRDSSERYAIVPASFMNAWYK 857
Query: 481 YISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVC----KRGSIYQKGSATDGL 536
+++ +N P +LD + L C+ DL+C KRG + +
Sbjct: 858 WLNKPTENP---RPGVLD--CNELLCQH---------DLLCIDPNKRGDRAE-------V 896
Query: 537 TIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNE 596
+ + D+ E + E G ++ N++ + + +P RD
Sbjct: 897 RFIPDEDFLTLVE----LHEGGPHIVARGQNDS----------VPMRVQP--DRD----- 935
Query: 597 IESQRPVVRTFPEICEDCIGER----ESCELMQKLNYCDKDISVFLVRGKEAPRSILEAS 652
+C+ C ER ES + +++ D+D + E R+
Sbjct: 936 -------------VCDACRTERLSNYESAHVT--ISFLDEDDPLPTPDAYELSRATTPPE 980
Query: 653 ESMFEPDRRASKRSR---KTRSFVNLKVSASTSIYQLKMMIWESLGV-VKENQILHKGQR 708
+ +R R + K R V + + + +K+ I + + V+ ++ +G
Sbjct: 981 PTKSNGLKRYGLRQKARNKQRREVMVPIQRHNLVKAIKVEISQEYRISVQRQRLFLRGME 1040
Query: 709 IIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSN 767
+ + T+++ I PGD L ++ A+ S++ + + +EGF GTLL+ N
Sbjct: 1041 L--SQTQTISEAGILPGDVLELR----------AERASNEAYSTRG-DEGFGGTLLSGN 1086
>gi|409045665|gb|EKM55145.1| hypothetical protein PHACADRAFT_94093 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1174
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 177/823 (21%), Positives = 307/823 (37%), Gaps = 207/823 (25%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH--------------- 74
IY L VL+H+G + GHY I D W++F+DE V+ LG
Sbjct: 418 IYYLRGVLLHRGASAYHGHYETQIFDMKNKAWYQFNDEVVTKLGSLRAPPKAMKKDELKS 477
Query: 75 -------HPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVE 127
P +GS + E V P+ + + A +H+ + Y
Sbjct: 478 RKANDKARPSQVTPPRAGSDIEIVEYAVVLPLRKSLYLAVFMLTALHIDDANSY------ 531
Query: 128 RFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELN 187
+S DAYML+Y D + + D P + ++ELN
Sbjct: 532 -ISSRDAYMLIYARAPDNMTGRPNGI-----------------PDPQPPPRALQVVEELN 573
Query: 188 RSYLDGCEQFKLRKNRELDCISERKQEVRSLL-------------SEAPVPSLEEPFYWI 234
++ CE++ ++ ER Q+ R ++ ++ V S + W+
Sbjct: 574 ATHEKACEEYSDQEK----AAEERFQQTRCMVMDIYRSWSLSHDDEDSVVCSKQALETWM 629
Query: 235 S----------SDWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
S + + + ++ T+ N I C HG++ K +MKR++ A+++
Sbjct: 630 SRHLTKPKDQKPEMINEGTLALYNRTIPNGDITCAHGRLDPKKAQNMKRLNRSAYDRMST 689
Query: 285 K--YNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKS-----LKGLADDVLSGKLVEG 337
+ N P+ + D C C+ +G +RDR S L + D+V +
Sbjct: 690 EGHCNFEPSFSPADVCPECVEEG---------FRDRIYSVEHPRLVSVFDEVAPVNEGDS 740
Query: 338 TYYVSKSWLQQW-TRRKNLDAPSEADGGP-----TTSIRCPHGQLMPEKAGGAKRLLVPE 391
+++SK WL+ W + + + S D P T ++C HG L P +++ + P
Sbjct: 741 AFWISKPWLKDWRSTKPKMHISSRPDPPPDDSEYTHHVKCEHGGLTPNVI--SRKRISPA 798
Query: 392 ILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRAR------KLK 445
YE V P +T DS+ C C +A+ +++ ED A+ K K
Sbjct: 799 -----AYELLKGVFP----AWTTLSTDSDTCAVC-EAMVQMS-REDKRGAKIQAEDEKAK 847
Query: 446 ERQNHEKLALGKSIPL-SLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVIDSL 504
R H+ G + L + C L+P+ ++ WR ++ + ++ PE +D
Sbjct: 848 LRHMHDHALTGNNALLEEIPCA--LVPAPFIRAWRQWLF----HPANERPESVD--TRQF 899
Query: 505 KCEKHLRLLE--RPPDLVCKRGSIYQKGSATDGL-TIVTENDWKWFCEEWGGIKEKGLSV 561
CE L L+ P DL DG+ I++ +DW
Sbjct: 900 ICEHGLLALDPNTPGDL--------------DGVAAIISRDDWAVL-------------- 931
Query: 562 IVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDCIGERESC 621
E L S CGP IE R P +C ++C
Sbjct: 932 -----------------ETLYS---CGPL----IAIEHADGAWRHDPAVC-------KAC 960
Query: 622 ELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP----------------DRRASKR 665
L K Y ++++ ++R + + +E + +P + R SKR
Sbjct: 961 RLKCKSAYEKTELTIRVLRADDPTPTPETYAEQLSQPAEARPTVVTYGSKKIGNLRQSKR 1020
Query: 666 SRKTRSF---VNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNI 722
R+TR L ++ ++ LK+ I L + +Q L+ ++ TL L +
Sbjct: 1021 IRQTRELGRRRKLIITPDMTVKDLKIQIQAELEIPTISQCLYYHGNELENSAMTLGSLGV 1080
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVE-EGFRGTLL 764
D + ++ E E D+ SD + + E GF GTLL
Sbjct: 1081 LSNDTMDLR--EESEDIDLLGSGSDAEPTTRKKEGRGFGGTLL 1121
>gi|328782758|ref|XP_393474.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Apis
mellifera]
Length = 1147
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 126/592 (21%), Positives = 229/592 (38%), Gaps = 126/592 (21%)
Query: 229 EPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKF 282
E + WI SDWL +W D + P +DN+++ C H ++ K+ K I A +
Sbjct: 625 EKYQWIPSDWLSKWLNGHSFIDGVPP--IDNSTLMCTHYRLDPLKVNRAKCIPIAAADIL 682
Query: 283 FFKYNGGPALTNDDYCMTC-----------------------LIDG------AHTVVCAD 313
+ KY GGP L + +C C LI VV AD
Sbjct: 683 YEKYRGGPRLDENSFCEVCVKRRYKLLRFKMSLERDYKEVSELIRNFKEPFETSYVVGAD 742
Query: 314 SYRD-RRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGP------- 365
S R RR +++ DD+ + +E + +Q+ + ++ ++ + G
Sbjct: 743 SLRSWRRLAMEKFMDDM--EQEIEDEDCQDPNSIQEDRKSESKESERIKESGEGEENEVI 800
Query: 366 ---TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEEC 422
+ C HG L K + R +VP W+ + K P G +P+ S C
Sbjct: 801 IYFNEDLLCEHGSL---KTPDSTRKIVPREAWMIL----RKYFP----GSKEYPIGSSSC 849
Query: 423 PECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTK 477
C + + + + + +++ L GK+ L C+ +Y++ +L
Sbjct: 850 SICEEKMENAQKAKKDDKIKAKQQKDELNDLYHGKNRNEILKCEEPEKAFYIVEKGFLDS 909
Query: 478 WRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLT 537
WR+++ + + + I +GV L CE H +G +Y + + T
Sbjct: 910 WRSFLRYAEVFSKTPPVGIRNGV---LLCEPH-------------KGFLYSPSISNELFT 953
Query: 538 IVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEI 597
IVT +W + + + +I+ +N+
Sbjct: 954 IVTAEEWAKLMQFY----DVDYPIIIKKNNSD---------------------------- 981
Query: 598 ESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFE 657
++T P +C C+ R E ++ L Y I + V E +S ++
Sbjct: 982 ------LQTEPSLCAACMLARVEQERLESLKYDRATIYIKCVEDNEDTKSENDSEMPAKR 1035
Query: 658 P---DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQEC 714
P + R S+ R + LKVS+ ++ +LK+M + G +Q L G+ +
Sbjct: 1036 PKLENTRPSRTRRNLKGSHELKVSSEITLKELKLMTMQICGAGPYDQHLMLGEHELTDHS 1095
Query: 715 ATLADLNIFPGDKLWVQ-DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+LA L IFPG L ++ D+ I D+ + ++ + + E+GF+GT L
Sbjct: 1096 QSLAALGIFPGALLTLKIDTPIENEADVTSDANNPESSFP--EKGFKGTELV 1145
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K+ S FP +L+M + P Q L Y L AVL HKG + +SGHYIA I + N G+W
Sbjct: 306 KRKLNSFIQFPEDLDMSEYVRCPLQTHL-YSLVAVLSHKGPSAHSGHYIANICNSN-GEW 363
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G + + SK+++
Sbjct: 364 YQFSDDKVEKMQNKRIEDGVNEN-SKIIK 391
>gi|336364922|gb|EGN93275.1| hypothetical protein SERLA73DRAFT_78881 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1179
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 195/850 (22%), Positives = 338/850 (39%), Gaps = 166/850 (19%)
Query: 2 KKKITSPFCFPGELNM--------QRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIA 51
+KK FP LNM +R+ SE + D IYDL VL+HKG + GHY A
Sbjct: 364 RKKSKHSILFPASLNMAQFVGPAAKRKASESTSDDSQDIYDLRGVLLHKGASAYHGHYEA 423
Query: 52 LIKDENTGQWWEFDDEHVSNL------GHHPFGEG------------SSSSGSKVVRSEP 93
+ D T W++FDDE V+ L G G+G S+ S S+ +
Sbjct: 424 QVFDVTTQTWYQFDDETVTKLESLGDRGLIVNGQGRMSRLYLRDCVYSNKSFSEDLSKAR 483
Query: 94 VVCQPVSER--VEGANE--NHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSK 149
+ +R V+G ++ N V + + + N + F+S DAYML+Y R
Sbjct: 484 MSKTNAKKRKVVDGTDDEFNEVPTAVNGARPKDVKNCDIFSSKDAYMLIYARRGVVASGH 543
Query: 150 RKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRK-NRELDCI 208
D+ D + ES+ FN + PS + LN + + C+ F ++ N +LD
Sbjct: 544 VSDM--DAPSSTTESDQDSFN--LTPPSRALDVVNTLNAEHDEACKVFATKEDNLKLD-F 598
Query: 209 SERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFP--------STLDN------- 253
++ + R + S + + +E + L W K S LDN
Sbjct: 599 AKVRDFRRDIYSSWNIDTYDENSIVVCRQVLETWLTKPITKQKEASPQSLLDNDGVILVD 658
Query: 254 --TSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP----ALTNDDYCMTCLIDGAH 307
I C H + K MKR++ A+ + + P A D C C+
Sbjct: 659 TPIDILCKHDALDPQKSHRMKRMNVAAFQQI--EATAEPTRLSARHPKDICEICV----R 712
Query: 308 TVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRK-NLDAPSEADGGPT 366
+ Y+ D+V +L + +Y++SK+WL+ W K + D P
Sbjct: 713 EIFIEKLYQIEHPQAVAQFDEVCDNELDQISYWISKNWLKDWRLSKPKMHTSLRGDVAPN 772
Query: 367 -----TSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEE 421
+ C HG L R + I + + P +T L
Sbjct: 773 APEFIAHVTCEHGGL---SLNVTARRRISAQASAIITSNKNNLFPQWQPVATTEQL---- 825
Query: 422 CPECSDALSEVACLEDSIRAR----KLKERQNHEKLALGKSIPL-SLDCKYYLLPSTWLT 476
C C ++ + IR R K + R H+ G ++ L ++ C ++P+ ++
Sbjct: 826 CSVCESSIQMSKEDKREIRKRVENEKARLRHMHDNALTGNTLLLENVPCA--IVPAQFIR 883
Query: 477 KWRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLL---ERPPDLVCKRGSIYQKGSAT 533
WR +++ K + P+ +D C H +L+ P DL
Sbjct: 884 LWRQWLN---KPTDVVRPKTVDN--SQFLC-VHSKLVFDPNCPSDL-------------D 924
Query: 534 DGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEE 593
+ + +V ++W E + G ++I++ K I+ GP
Sbjct: 925 NCIAVVQRSEWNILEELYTC----GPTIILE-------------KRIVE-----GP---- 958
Query: 594 NNEIESQRPVVRTFPE--ICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSI--- 648
+N E VR F + +C++ C L ++L+Y +++V ++ ++ I
Sbjct: 959 HNNAE-----VRFFHDVPVCDE-------CRLKRQLDYEATELTVRVLGPGDSASKIGKQ 1006
Query: 649 ---LEASESMFE--PDR----RASKRSRKTRS---FVNLKVSASTSIYQLKMMIWESLGV 696
L++ E M P + R SKR R+T+ L + ST++ ++K+M++E L +
Sbjct: 1007 VDQLDSEEQMASKGPRKLSGVRQSKRIRQTKDRGETRRLTIYKSTTVKEIKIMLYEQLKI 1066
Query: 697 VKENQ-ILHKGQRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHV 755
Q + ++GQ + D AT+ L I D L +Q+ E+ + ++ + K
Sbjct: 1067 PTIYQRLFYRGQELQDN-LATVQSLGILINDILDLQE-ELEDDNNLNVSNGEAKRGFAE- 1123
Query: 756 EEGFRGTLLT 765
E+GF GTLL+
Sbjct: 1124 EKGFGGTLLS 1133
>gi|380021005|ref|XP_003694365.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Apis
florea]
Length = 1085
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 125/592 (21%), Positives = 226/592 (38%), Gaps = 126/592 (21%)
Query: 229 EPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKF 282
E + WI SDWL +W D + P +DN+++ C H ++ K+ K I A +
Sbjct: 563 EKYQWIPSDWLSKWLNGHSFIDGVPP--IDNSTLMCTHYRLDPLKVNRAKCIPVAAADVL 620
Query: 283 FFKYNGGPALTNDDYCMTC-----------------------LIDG------AHTVVCAD 313
+ KY GGP L + +C C LI VV AD
Sbjct: 621 YNKYRGGPRLDENSFCEVCVKRRYKLLRFKMSLERDYKEVSELIRNFKEPFETSYVVGAD 680
Query: 314 SYRD-RRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGP------- 365
S R RR +++ DD+ + +E + +Q+ + ++ + + G
Sbjct: 681 SLRSWRRLAMEKFMDDM--EQEIEDEDCQDPNSIQEDRKNESKEGERVKESGEGEENEVI 738
Query: 366 ---TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEEC 422
+ C HG L K + R +VP W + K P G +P+ S C
Sbjct: 739 IYFNEDLLCEHGSL---KTPDSTRKIVPREAWTIL----RKYFP----GSKEYPIGSSSC 787
Query: 423 PECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTK 477
C + + + + + +++ L G++ L C+ +Y++ +L
Sbjct: 788 SICEEKMENAQKAKKDDKIKAKQQKDELNDLYHGRNRNEILKCEDPEKAFYIVEKGFLDS 847
Query: 478 WRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLT 537
WR+++ + + + I +GV L CE H +G +Y + T
Sbjct: 848 WRSFLRYAEVFSKTPPVGIRNGV---LLCEPH-------------KGFLYSPSINNELFT 891
Query: 538 IVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEI 597
IVT +W + + + ++I+ +N
Sbjct: 892 IVTAEEWAKLMQFY----DVDHTIIIKKNNTD---------------------------- 919
Query: 598 ESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFE 657
++T P +C C+ R E ++ L Y I + V E +S ++
Sbjct: 920 ------LQTEPSLCAACMLARVEQERLESLKYDRATIYIKCVEDNEDTKSENDSEMPAKR 973
Query: 658 P---DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQEC 714
P + R S+ R + LKVS+ ++ +LK+M + G +Q L G+ +
Sbjct: 974 PKLENTRPSRTRRNLKGSHELKVSSEITLKELKLMTMQICGAGPYDQHLMLGEHELTDHS 1033
Query: 715 ATLADLNIFPGDKLWVQ-DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+LA L IFPG L ++ D+ I D+ + ++ + + E+GF+GT L
Sbjct: 1034 QSLAALGIFPGALLTLKIDTPIENEADVTSDANNPESSFP--EKGFKGTELV 1083
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K+ S FP +L+M + P Q L Y L AVL HKG + +SGHYIA I + N G+W
Sbjct: 243 KRKLNSFIQFPEDLDMSEYVRCPLQTHL-YSLVAVLSHKGPSAHSGHYIANICNSN-GEW 300
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G + + SK+++
Sbjct: 301 YQFSDDKVEKMQNKRIEDGVNEN-SKIIK 328
>gi|353242988|emb|CCA74580.1| hypothetical protein PIIN_08532 [Piriformospora indica DSM 11827]
Length = 1087
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 185/831 (22%), Positives = 314/831 (37%), Gaps = 190/831 (22%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+KK SP +P E++M + S S+++ +YDL VL+HKG++ GHY A +W
Sbjct: 378 RKKSKSPIRYPAEIDMSQWNSVDSEVEDMYDLRGVLLHKGSSAYHGHYEAQAFHSQEAKW 437
Query: 62 WEFDDEHVSNL-GHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
++F+DE V+ L P G DV + E
Sbjct: 438 FQFNDEIVTELPSFQPPG---------------------------------DVMILDEEV 464
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
+ + TS D Y L+Y RRD E S ++ E SE + D L + L
Sbjct: 465 VEKRGLAQITSKDCYCLIY-ARRDTEVS--------MDIQEDPSEAVRAKVDE-LNATLE 514
Query: 181 KDIKELNRSYLDGCEQF-KLRKNRE---LDCISERKQEVRSLLSEAPVPSLEEPFYWISS 236
K + E + + CE+F K R + D K E R+L+ + + W++
Sbjct: 515 KQLAEYDAETQELCERFEKARLTKSSIYKDWHLSSKSEDRALVHGESLKA------WLAR 568
Query: 237 DWLRQWADKIFPSTLDNTSIQ-------CLHGKVPESKIGSMKRISSKAWNKFFFKYNGG 289
D + A + S +TS C HG++ KI MK I A+N+
Sbjct: 569 DSPSERAHEDDGSNQASTSSPTATYAWLCEHGRIDPRKITEMKIIKLSAYNRLV---ELA 625
Query: 290 PALTNDDYCMTCLIDGAHTVVCADSYRDRRKSL----KGLADDVLSGKL-------VEGT 338
L + M C V C RK L + L+D L+ ++ +
Sbjct: 626 KDLFPPETPMPC-------VECTKIMFAERKYLEEHAEALSDFELASQMKLNLGDESDQQ 678
Query: 339 YYVSKSWLQQW-TRRKNLDAPSEADGGP-----TTSIRCPHGQLMPEKAGGAKRLLVPEI 392
+++SKSWL+ W +R + P ++D P + + C H L+P
Sbjct: 679 FWISKSWLKDWRLKRPKMHIPGQSDPSPDSDPYRSEVMCDHDGLIPRSQ----------- 727
Query: 393 LWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC------SDALSEVACLEDSIRARKLKE 446
L I A V + P + C C + +E +R+LK
Sbjct: 728 LRTLITRGARDVLQGLFPDWTPLPKHTRPCDGCLLQAEEAAIDAEELATISQTESRELKS 787
Query: 447 RQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVIDSLKC 506
H L K + L KY + P++W+ KW ++ + P+ +D S C
Sbjct: 788 FDVHNPLTNRKVL---LGVKYAIAPASWVRKWVDWTKNPRRRP---RPQAIDN--SSFLC 839
Query: 507 EKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFS 566
H L P D + TD + ++ E W+ + G G + +
Sbjct: 840 -SHGLLAFDPNDHL----------EVTDSIALLWETQWRKIEAMYPG---SGPFIPIQGF 885
Query: 567 NNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDCIGERES------ 620
G++ + I + IC +C+ ++ S
Sbjct: 886 LKEGSDTEKEIRAIDWA--------------------------ICNECLVQKASDFAEID 919
Query: 621 --CELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTRS----FVN 674
+++ + + + S F+ + ++I E + ++ P S+R+R+ RS +++
Sbjct: 920 LFVQMLSEDDPKPTEASYFITK-----KAIKEHNGALPSPSDIGSRRTRRIRSPEGGYIS 974
Query: 675 LK---VSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLADLNIFPGDKLWV 730
LK +S S + LK I+ + E+Q I +KG + D T+A+L I GD + +
Sbjct: 975 LKCFSISPFMSSFSLKSQIYSKEHIPTEDQSIYYKGTLLDDSAEQTIAELGIEMGDVVHL 1034
Query: 731 -------QDSEIHEHRDIADE---------LSDQKMNVQHVEEGFRGTLLT 765
QD + E D DE +S +K+ F+GTLL+
Sbjct: 1035 VRLAPRFQDKTVIELDDSDDEEYERKRKKPISARKVVAPVERRAFQGTLLS 1085
>gi|393216930|gb|EJD02420.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1208
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 185/873 (21%), Positives = 338/873 (38%), Gaps = 178/873 (20%)
Query: 2 KKKITSPFCFPGELNMQRRLSE--PSQL-------DLIYDLSAVLIHKGTAVNSGHYIAL 52
+KK P FP L+M+ L+ P Q+ IY+L VL+HKG + GHY A
Sbjct: 365 RKKSKLPLRFPPYLDMKPFLNSAGPGQMVGEETSGTEIYELRGVLLHKGPSAYHGHYEAQ 424
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVC-------QPV------ 99
+ ++ T QW++F+DE V+ P S + + SEP++ +P
Sbjct: 425 VFNQETNQWYQFNDEAVT-----PLSSFYSPKSAPITSSEPIIVDGEDDTDRPAKRQKRN 479
Query: 100 --SERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDV 157
S R++ ++E P + G+ V +S DAYML+Y R + + V
Sbjct: 480 VNSRRIDDSDEGEAASTAPVA-ISTGTKV--LSSKDAYMLIYARREEPNLDDARVPVPPT 536
Query: 158 NNMEI----------------------ESEMIFFND---DIFLPSHLGKDIKELNRSYLD 192
+ +EI ++E I D D++ H+ +
Sbjct: 537 DALEIIRSSNEEHEKACADYNAMREQKKTEFIKVRDNIRDVYRSWHISSAYEPSVIVSKA 596
Query: 193 GCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST-- 250
+++ L L+ S S+ S P PS ++P +S Q + + S
Sbjct: 597 ALQKWILSPLAPLESKS-------SVQSATPAPSEQKPVEEVSE--AAQNTETVASSNPD 647
Query: 251 ------------LDNTSIQCLHGKVPESKIG-----SMKRISSKAWNKFFFKYNGG---P 290
+DNT++ C H E + MK IS +A +K +G P
Sbjct: 648 IANDTPWEALNIIDNTNLLCTHSIDQERLLNPLADKDMKIISMEARDKIV--KDGTRLLP 705
Query: 291 ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWT 350
LT D+ C C+ Y+ L +++ S +++SK+W + W
Sbjct: 706 ELTVDNVCRLCV----ENEFAEKLYQMEHPRLVAEFNEISSTATENEGFWISKTWFKDWV 761
Query: 351 -RRKNLDAPSEADGGP-----------TTSIRCPHGQLMPEKAGGAKRLLVPEILWLF-- 396
R + PS+ D P + + C HG L G +R + E + L
Sbjct: 762 LNRPRMHVPSQPDPPPENVSDDPALGFRSHVYCKHGSLTIN--VGTRRRISLEAVKLLQR 819
Query: 397 IYEDAMKVKPDDLLGCSTFPLDSEECPEC--SDALSEVACLEDSIRARKLKERQN--HEK 452
I++D P D+E CP C +S+ + LE +A K + N +E+
Sbjct: 820 IFQD-----------WEPPPWDAETCPACDVDVHISKESKLEQRKKAENEKAKFNRLNEE 868
Query: 453 LALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRL 512
G+ L + + ++PS ++ WR ++ G + P + + S+ C H RL
Sbjct: 869 NIFGQYGILQ-NSTFAVVPSEFIHSWRKWLVKPGDS-----PRVTEINTQSMLC-PHERL 921
Query: 513 LERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNE 572
+ + ++ + + ++T ++W E+ + E G + + E
Sbjct: 922 I----------LDLSEEADFDEDVAVLTMSEW----EQLQTLYEAGPLIKCE----CRME 963
Query: 573 LVGSCKE--ILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYC 630
L GS E ++SE PC D E S + T I + + +
Sbjct: 964 LDGSGHERRYIISEIPCC-SDCRTKEKLSFNSTMLTVIRIDKGLVPSNST---------- 1012
Query: 631 DKDISVFLVRGKEAPRSI-----LEASESMFEPDRRASKRSRKTR--SFVN---LKVSAS 680
+ +V+ AP + L +++ +++SR+ + + N +++
Sbjct: 1013 --QLPSIVVQHPLAPSPVSNGKKLNEAKNSITAKANGTRQSRRLQEGKYSNCQQIRIQKD 1070
Query: 681 TSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADLNIFPGDKLWVQ---DSEIHE 737
++ +K I+++ + +Q L+ + +D T+A+L I D L+++ + I
Sbjct: 1071 WTVKDVKAAIYKAFRIPTISQQLYYHGKELDDNSKTVAELQILNKDTLYLKEVIEDMIVL 1130
Query: 738 HRDIADELSDQKMNVQHVEEGFRGTLLTSNLSS 770
DI DE +K + F+GTLL+ S
Sbjct: 1131 DSDIEDEPLRKKSRKHDEGDAFKGTLLSGGTKS 1163
>gi|198435558|ref|XP_002121467.1| PREDICTED: similar to USP48 protein [Ciona intestinalis]
Length = 1077
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 179/860 (20%), Positives = 337/860 (39%), Gaps = 180/860 (20%)
Query: 2 KKKITSPFCFPGELNMQ----RRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDEN 57
++KI + FP L++ + ++ SQ D Y L+AVLIH+G + +SGH++A I +
Sbjct: 297 RQKIVTSLTFPDHLDLSSMVDKNVTTLSQSDTQYKLTAVLIHRGLSASSGHFVAHILEPE 356
Query: 58 TGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPS 117
+G W++F+DE V+ + + S G V +E ++ +P ++++ NH
Sbjct: 357 SGNWYKFNDEVVAKMKSGKKLDLDSYKGEDTVCTE-LLQEPAPKKMKLLKGNH------- 408
Query: 118 SEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPS 177
+S D YML+Y DK N+ + + +P+
Sbjct: 409 ------------SSKDVYMLVYTKVSDK-------------NLAM----------VPVPA 433
Query: 178 HLGKDIKELN---RSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPF--Y 232
+ + + E N + L G K + ++L + RK +R + + EE F
Sbjct: 434 TVQQLVDEHNAVKATRLKGIR--KEAEEKQLKDVELRKHMIRFI----HLLHSEENFGHR 487
Query: 233 WISSDWLRQW-----ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYN 287
+ + L+Q+ +D +F ++ C HG + K ++K I A + Y
Sbjct: 488 LLPTKVLKQFMNSAKSDAVFKPEVN---YLCQHGNLKVDKAVTLKYIPKSAADIIQSTYP 544
Query: 288 GGPALTNDDYCMTCLIDGAHTVVCADSYRDRR------KSLKGLADDVLSGKLVEGTYYV 341
+ + C C+ + H ++ R ++ +SLK L + S ++ +YV
Sbjct: 545 LFKPIPDSMLCHACVKN--HCLLIQAKKRLKKDNLFVSESLKTLQNG--STEMDTDLFYV 600
Query: 342 SKSWLQQW--------------TRRKNL-----DAPSEADGGPTTS----------IRCP 372
K L++W T N+ D+ S A G +S + C
Sbjct: 601 GKQSLKRWRSLAMQEVLKKYASTSNNNIMADSTDSKSNATGNNESSDESDETFNSDLLCN 660
Query: 373 HGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEV 432
H L EK+ LVP LW ++ PD C F S + C+ S+V
Sbjct: 661 HNHLTIEKSAFQ---LVPHYLWEILHH----YFPD----CVEFKYASAD--PCTTCQSDV 707
Query: 433 ACLEDSIRARK---LKERQNHEKLALGKSIP-LSL------------DCKYYLLPSTWLT 476
E + RK ++ N +L L K+ P L+ +++++PS ++
Sbjct: 708 LFHEKELTTRKEIAAIQKANLHQLFLNKNRPSLAFLYDVEFSKQQANQTEFFIVPSQFVD 767
Query: 477 KWRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGL 536
W++++ KN EP ++ + + C ++ L + +L ++ +
Sbjct: 768 HWKDFVRHPDKN----EP-VVSVINKNFLCPHNMLLYDPALNLKSTESTV---SNCEQQC 819
Query: 537 TIVTENDWKWFCEEWGGIKEKGLSVI-----------VDFSNNAGNELVGSCKEILLSEE 585
++ ++W++ E + E +S +D +N GN + + L+
Sbjct: 820 EVLWCSEWRYIKENFSVDHEIQISKTFPSECFVVLQNMDHTNLNGNASTNGTEIVDLTGS 879
Query: 586 PCGP-----RDEEN--------NEIESQRPVVRTF--PEICEDCIGERESCELMQKLNYC 630
P D EN N+ +PV R P +C C+ E + Y
Sbjct: 880 DQSPSVIIKSDAENQSAKTNVENKCNIPKPVARLVYSPGLCATCMKGLEQKRFEEMCKYD 939
Query: 631 DKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTRSFVN-----LKVSASTSIYQ 685
D +I ++++ + + S E + ++R ++ R V +S++ ++ +
Sbjct: 940 DGEI--YVLKSTQPSQEFCSLSTKNIETLPKETRRGKRVRRCVRGEKKLSNLSSNLTLKE 997
Query: 686 LKMMIWESLGVVKENQILHKGQRIIDQECATLADLNIFPGDKL-WVQDSEIHEHRDIADE 744
LK+ I + +Q L R + + TL L I PG L V+D + I E
Sbjct: 998 LKIRIMNQFSIPPFDQNLWLNGRKLTHDDWTLESLKIIPGCTLNLVEDIPAPDSALIVYE 1057
Query: 745 LSDQKMNVQHVEEGFRGTLL 764
+ E GF+GT L
Sbjct: 1058 ----SVKTTEPETGFQGTGL 1073
>gi|392567259|gb|EIW60434.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1198
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 170/809 (21%), Positives = 293/809 (36%), Gaps = 156/809 (19%)
Query: 2 KKKITSPFCFPGELNM----------QRRLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYI 50
+KK FP ++M +RR + P++ + +Y+L VL+HKG + GHY
Sbjct: 372 RKKSKQSILFPTFIDMNHFVGPPEKRRRRGAWPARCSENLYELRGVLLHKGASAYHGHYE 431
Query: 51 ALIKDENTGQWWEFDDEHVSNLGH--------HPFGEGSSSSGSKVVRSEPVVCQPVSE- 101
A + D W++F+DE V+ + G + K + P P +
Sbjct: 432 AQVFDVQNQSWYQFNDEEVTKIDSLVPKIDTTKKGGRNGKDTKKKNGSAAPKARVPARKR 491
Query: 102 -RVEGANENHVDVHLPSSEYYNGSNVER------FTSNDAYMLMYNLRRDKEDSKRKDVV 154
RVE ++ + V PS + + ER +S DAYML+Y + KD +
Sbjct: 492 RRVEDSDSDIEIVDGPSQPQKSEESPERPERPDYISSKDAYMLVYARVYN------KDAI 545
Query: 155 HDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQE 214
D + + + +I P + + LN ++ C++ R+ + +Q
Sbjct: 546 VDRAIQRPDPPPVQVS-EIVPPPKAMEAVTSLNVAHEKACKEHTEREKESRVRFDKTRQT 604
Query: 215 VRSLLSEAPVPSLEEPFYWISSDWLRQW--------------------------ADKIFP 248
V + V S +E S L W D P
Sbjct: 605 VMDIYRSWNVSSRDEDCVVASRQSLESWISRHIAKPKTPKTTPTPAPADNAPKKEDAAVP 664
Query: 249 S-------TLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG--GPALTNDDYCM 299
++ + + C HGK+ K G MK I + A + + P LT D C
Sbjct: 665 PAESPSEVSISTSDVVCSHGKLDPDKAGDMKVIRASAHARIVEEEECVLAPKLTPADVCP 724
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
+C+ + A Y+ L D+V + E +++SK+WL+ W L P
Sbjct: 725 SCV----ERMFNAKLYQIEHPRLVSRFDEVAAVADDEDGFHISKTWLKDW----RLARPK 776
Query: 360 -EADGGP---------TTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
DG P + + C HG L A R + + ++E +P
Sbjct: 777 MHVDGAPDPPPDAEEYLSDVVCEHGNLA---TNVATRRRISAEAYSILHEVFPNWRPPS- 832
Query: 410 LGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQN------HEKLALGKSIPLSL 463
+E CP C + ED RK E + H+ AL + L
Sbjct: 833 -------TSAEPCPVCEAQMH--ISREDRREYRKQAEEEKARLKHMHDN-ALNGNTALLE 882
Query: 464 DCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKR 523
D ++P+ ++ WR + + + + PE D CE L + P++
Sbjct: 883 DVPCAIVPAQFVRSWRQW---TMRPSELARPEGPDN--SQFICEHGLLAFD--PNV---- 931
Query: 524 GSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLS 583
G +TIV +DW E + G + V+ + + C + +
Sbjct: 932 -----SGDLDSSMTIVKRSDWDALEELYSA----GPLIAVENAAGKFTHELAVCVDCRI- 981
Query: 584 EEPCGPRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKE 643
QR EI +G + Q Y ++ + K
Sbjct: 982 ----------------QRRTSFEMTEITVRVLGPNDPIPTAQ--TYIEEPVQP----AKS 1019
Query: 644 APRSILEASESMFEPDRRASKRSRKTRSF---VNLKVSASTSIYQLKMMIWESLGV-VKE 699
++L S+ E R SKR R+ R + + ++ + S+ +LK+M+ + LG+ +
Sbjct: 1020 GQTTLLTYSKKQSE-GYRKSKRIRQVREYGKRRKITITKAMSVKELKVMLSDELGIPIIS 1078
Query: 700 NQILHKGQRIIDQECATLADLNIFPGDKL 728
++ H+GQ +D AT+ L I D L
Sbjct: 1079 QRLFHRGQE-LDDSSATMLALGILSNDLL 1106
>gi|336377495|gb|EGO18657.1| hypothetical protein SERLADRAFT_418842 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1128
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 183/818 (22%), Positives = 327/818 (39%), Gaps = 155/818 (18%)
Query: 18 QRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL--- 72
+R+ SE + D IYDL VL+HKG + GHY A + D T W++FDDE V+ L
Sbjct: 350 KRKASESTSDDSQDIYDLRGVLLHKGASAYHGHYEAQVFDVTTQTWYQFDDETVTKLESL 409
Query: 73 ---GHHPFGEG------------SSSSGSKVVRSEPVVCQPVSER--VEGANE--NHVDV 113
G G+G S+ S S+ + + +R V+G ++ N V
Sbjct: 410 GDRGLIVNGQGRMSRLYLRDCVYSNKSFSEDLSKARMSKTNAKKRKVVDGTDDEFNEVPT 469
Query: 114 HLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDI 173
+ + + N + F+S DAYML+Y R D+ D + ES+ FN +
Sbjct: 470 AVNGARPKDVKNCDIFSSKDAYMLIYARRGVVASGHVSDM--DAPSSTTESDQDSFN--L 525
Query: 174 FLPSHLGKDIKELNRSYLDGCEQFKLRK-NRELDCISERKQEVRSLLSEAPVPSLEEPFY 232
PS + LN + + C+ F ++ N +LD R +L
Sbjct: 526 TPPSRALDVVNTLNAEHDEACKVFATKEDNLKLDFAKNSIVVCRQVLET----------- 574
Query: 233 WISSDWLRQWADKIFPSTLDN---------TSIQCLHGKVPESKIGSMKRISSKAWNKFF 283
W++ +Q + S LDN I C H + K MKR++ A+ +
Sbjct: 575 WLTKPITKQ-KEASPQSLLDNDGVILVDTPIDILCKHDALDPQKSHRMKRMNVAAFQQI- 632
Query: 284 FKYNGGP----ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTY 339
+ P A D C C+ + Y+ D+V +L + +Y
Sbjct: 633 -EATAEPTRLSARHPKDICEICV----REIFIEKLYQIEHPQAVAQFDEVCDNELDQISY 687
Query: 340 YVSKSWLQQWTRRK-NLDAPSEADGGPT-----TSIRCPHGQLMPEKAGGAKRLLVPEIL 393
++SK+WL+ W K + D P + C HG L +R+
Sbjct: 688 WISKNWLKDWRLSKPKMHTSLRGDVAPNAPEFIAHVTCEHGGL-SLNVTARRRISAQASA 746
Query: 394 WLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRAR----KLKERQN 449
+ ++A ++ + + C C ++ + IR R K + R
Sbjct: 747 IITSNKNACEILQNLFPQWQPVATTEQLCSVCESSIQMSKEDKREIRKRVENEKARLRHM 806
Query: 450 HEKLALGKSIPL-SLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVIDSLKCEK 508
H+ G ++ L ++ C ++P+ ++ WR +++ K + P+ +D C
Sbjct: 807 HDNALTGNTLLLENVPCA--IVPAQFIRLWRQWLN---KPTDVVRPKTVDN--SQFLC-V 858
Query: 509 HLRLL---ERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDF 565
H +L+ P DL + + +V ++W E + G ++I++
Sbjct: 859 HSKLVFDPNCPSDL-------------DNCIAVVQRSEWNILEELYTC----GPTIILE- 900
Query: 566 SNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPE--ICEDCIGERESCEL 623
K I+ GP +N E VR F + +C++ C L
Sbjct: 901 ------------KRIVE-----GP----HNNAE-----VRFFHDVPVCDE-------CRL 927
Query: 624 MQKLNYCDKDISVFLVRGKEAPRSI------LEASESMFE--PDR----RASKRSRKTR- 670
++L+Y +++V ++ ++ I L++ E M P + R SKR R+T+
Sbjct: 928 KRQLDYEATELTVRVLGPGDSASKIGKQVDQLDSEEQMASKGPRKLSGVRQSKRIRQTKD 987
Query: 671 --SFVNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLADLNIFPGDK 727
L + ST++ ++K+M++E L + Q + ++GQ + D AT+ L I D
Sbjct: 988 RGETRRLTIYKSTTVKEIKIMLYEQLKIPTIYQRLFYRGQELQDN-LATVQSLGILINDI 1046
Query: 728 LWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
L +Q+ E+ + ++ + K E+GF GTLL+
Sbjct: 1047 LDLQE-ELEDDNNLNVSNGEAKRGFAE-EKGFGGTLLS 1082
>gi|170087410|ref|XP_001874928.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650128|gb|EDR14369.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1193
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 188/831 (22%), Positives = 310/831 (37%), Gaps = 182/831 (21%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS---NLGHHPFGEGSSSSGS 86
IY+L +L+HKG + GHY A + D W++F DE V+ +LG + S +G
Sbjct: 421 IYELRGILLHKGASAYHGHYEAQVYDPELQSWFQFSDETVTRIKSLGDKIVEKRSEVNGR 480
Query: 87 KVVRSE---------------PVVC---QPVSERVEGANENHVDVHLPSSEYYNGS---- 124
+ V + VC + E V G L + +G+
Sbjct: 481 RYVDEKHKDQARRNRANARKRRRVCDSDEDAIECVSGCTNGQPSTPLRPNVMVSGTSSSA 540
Query: 125 -----NVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVN-NMEIESEMIFFNDDIFLPSH 178
+ TS DAYML+Y +K++ VN ++ + S I PS
Sbjct: 541 VASCDDSNTITSKDAYMLIYT---------KKELGEKVNESVAVASTRI---STPCPPSW 588
Query: 179 LGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLS--EAPVPSLEEPFYWISS 236
++ LN ++ CE F+ R+ + +++V + P+++ I
Sbjct: 589 AVDAVRLLNAAHEGACEIFESREKLAKKRFQDARKKVMDVYRTWNTLRPTMDS--LIIGQ 646
Query: 237 DWLRQWADKIFPST------------------------------LDNTSIQCLHGKVPES 266
+ L +W K T + N I C HGK+ +
Sbjct: 647 EALEEWLSKASVETGLGPALIEQDTEDPELDPELVGSSPQIQKVISNRDILCCHGKLDPN 706
Query: 267 KIGSMKRISSKAWNKFFFKYNG--GPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKG 324
K MKRI+ K +++ P T D C C+ T+ Y+ + +L
Sbjct: 707 KARDMKRIAKKGYDEIVKNTYCLFDPTPTPSDVCEECVA----TIFRERLYQVQHPALVR 762
Query: 325 LADDVLS-GKLVEGTYYVSKSWLQQW-TRRKNLDAPSEADGGPTT-----SIRCPHGQLM 377
D + + EG +++SK WL+ W + PS+ D P + +RC HG L
Sbjct: 763 DFDRISDIPEHCEG-FWISKKWLKDWRLSMPRMHVPSQDDPPPDSCDFDKHVRCEHGGLT 821
Query: 378 PEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLED 437
K I E+A+K+ + D+E C C DAL ++ ED
Sbjct: 822 LNTTNRCK-----------ISEEAVKLLQVSFPTWNPTSSDAEICAVC-DALIHIS-KED 868
Query: 438 SIRARKLKERQNHEKLALGKS---IPL-SLDCKYYLLPSTWLTKWRNYISPSGKNASSIE 493
R+ E + + S PL S + ++P+ + W+ ++ +N
Sbjct: 869 KKEGRRRAEDEKAMLKHMYNSWAIFPLASENTPCAVIPTPFYKCWKRWVDHPAENT---R 925
Query: 494 PEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATD---GLTIVTENDWKWFCEE 550
P+ +D + CE RLL I+ TD +T++ +W
Sbjct: 926 PDTVDN--EPFFCEH--RLL------------IFDPNCQTDVDSTVTVIRREEW------ 963
Query: 551 WGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEI 610
+A L + I L ++ C DEE N S +
Sbjct: 964 -----------------DALQRLYSAGPLIDLEQQIC---DEEVNYGHSIL--------V 995
Query: 611 CEDCIGERES----CELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRS 666
C DC +R++ E++ + + S V + P + + + R SKR
Sbjct: 996 CSDCRLKRKTDWDNAEIIVRFCGSKTETSNIKVPSQRKPITTYSCNAGV-----RQSKRL 1050
Query: 667 RKTRSF---VNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLADLNI 722
R+ + VS STS+ ++K+MI E + Q + H G I D E AT+ L
Sbjct: 1051 RQIKEHGERRRFPVSKSTSLKEIKIMIQEQFKIPTICQRLFHNGVEIHDNE-ATVGHLQF 1109
Query: 723 FPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEE--GFRGTLLTSNLSSQ 771
GD L +Q E +E +I + D + EE GF GTLL+ SS+
Sbjct: 1110 LAGDILDLQ--EANEVIEIDSDSDDPPARKKRREEGQGFNGTLLSGMPSSR 1158
>gi|321456319|gb|EFX67430.1| hypothetical protein DAPPUDRAFT_261673 [Daphnia pulex]
Length = 722
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 150/361 (41%), Gaps = 84/361 (23%)
Query: 1 MKKKITSPFCFPGELNMQRRLS----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
+KKK++S FP + M + EPS L YDLSAVLIH+G + SGHYIA IKD
Sbjct: 277 LKKKVSSMVHFPFVVEMSNYVKTQGVEPS--SLTYDLSAVLIHRGPSAYSGHYIAHIKDP 334
Query: 57 NTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLP 116
TG W++F+D V + F G + E +E +H
Sbjct: 335 VTGTWYKFNDGVVQKIEGTNFKLG------------------IEEDLEVTKGSH------ 370
Query: 117 SSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLP 176
S++AYML+Y+ RRD + V ++ + LP
Sbjct: 371 -------------GSSNAYMLVYS-RRDAAKPESVPVCSTTPSLSDPCSV--------LP 408
Query: 177 SHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISS 236
+ I N ++ RK+ +P SL++ + + +
Sbjct: 409 PWVQTTIFNENENFEAWTRDTASRKS-------------------SPCNSLDQDEF-VPT 448
Query: 237 DWLRQWA---DKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
WL W +K+ P +DN+ + C HGK+ K K +SS A ++ + +Y+GG L
Sbjct: 449 QWLSSWLGNDEKLRP--IDNSILLCEHGKLNPEKFREYKLVSSCAADELYAEYSGGRRLN 506
Query: 294 NDDYCMTCLIDGAHTVVCADS-YRDRRKSLKGLADDVLSGKL--VEGTYYVSKSWLQQWT 350
+D C C+ T C S R + + L ++L K+ + +++ K L+ W
Sbjct: 507 INDLCWDCVT----TTKCITSQLRSQLDNESKLIANLLKSKIDPNQPAFWIGKESLRSWK 562
Query: 351 R 351
+
Sbjct: 563 K 563
>gi|403415389|emb|CCM02089.1| predicted protein [Fibroporia radiculosa]
Length = 1171
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 201/538 (37%), Gaps = 120/538 (22%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPF---GE--GSSSS 84
+Y+L VL+HKG + GHY A + D G W++++DE V+ L F G+ GS SS
Sbjct: 391 LYELRGVLLHKGASAYHGHYEAQVFDMRNGAWYQYNDETVTKLDPSAFDVLGQLGGSMSS 450
Query: 85 GSKVVRSEPVVCQPVSERV-----EGANENHVDVHLPSSEYY------------------ 121
K E V Q + R + +E + PS + Y
Sbjct: 451 EQKNKSKENTVKQHSNSRKRRRVDDSDSETEIIGSRPSPKDYEKTPSSALGYNFFDLTSP 510
Query: 122 ----NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPS 177
S+ +S DAYML+Y D +N ++ + + I P+
Sbjct: 511 YAVTEDSSPRYISSRDAYMLVY-------------ARADNSNYQLGTHL----PAIEPPA 553
Query: 178 HLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSD 237
+ +K LN + C + ++++ S + + S+ V + E +S
Sbjct: 554 AARQAVKVLNDGHEVACNAYIEKESKANLNFSRTRSRIMSIYRTWSVATREMESVVVSRR 613
Query: 238 WLRQWADKIF----------------PSTLDNTS-------------IQCLHGKVPESKI 268
L W + P+++D S I C HG++ +K
Sbjct: 614 ELESWMLRYLSETKRRTVLPAEGSQGPNSIDADSMAAKEGDIEPAQAIVCAHGRLDPTKA 673
Query: 269 GSMKRISSKAWNKFFFK--YNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLA 326
MK I+ A+ + + P LT D C C+ + H + Y+
Sbjct: 674 NEMKVITKVAYERISSEDGVELLPKLTPLDVCAACVQEAFHERL----YQIEHPQSVAHF 729
Query: 327 DDVLSGKLVEGTYYVSKSWLQQWTRRKN------LDAPSEADGGPTTSIRCPHGQLMPEK 380
D++ E +++SK WL+ W K D PS +RC HG L
Sbjct: 730 DEIYLVHDNEPGFWISKQWLKDWRLAKPKMHVACRDDPSPDSQEFNRHVRCEHGGL---S 786
Query: 381 AGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIR 440
A A R + LF+ E + P G D E CP C +AL++++ ED
Sbjct: 787 ANAAARRRISTEACLFLQE----IFP----GWQALSADCELCPVC-EALAQIS-KEDKRE 836
Query: 441 ARKLKERQN-----------HEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGK 487
RK E + H AL K+IP + ++P+ ++ WR ++ G+
Sbjct: 837 VRKQAEEEKAKLKRMHDDTLHGNTALLKNIPCA------IVPAEFVRSWRQWLQRPGE 888
>gi|39645157|gb|AAH07326.2| USP48 protein [Homo sapiens]
Length = 305
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 131 SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSY 190
S +AYML+Y L+ ++ N + +P+ L + + N +
Sbjct: 12 SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQELVDRDNSKF 49
Query: 191 LDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST 250
+ C + + + +D + +EV+ L P + EP+ ++S +WL++W D+ P+
Sbjct: 50 EEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQKWLDESTPTK 107
Query: 251 -LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTV 309
+DN + C H K+ KI MKRIS A + F+ +Y GGP LT C C+++ +
Sbjct: 108 PIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRIL 167
Query: 310 VCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTS 368
+ + K++ L + G ++V KS L+ W R+ L+ E DG S
Sbjct: 168 RLKNQLNEDYKTVNNLLKAAVKG---SDGFWVGKSSLRSW-RQLALEQLDEQDGDAEQS 222
>gi|328707136|ref|XP_003243308.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like
[Acyrthosiphon pisum]
Length = 1090
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 136/319 (42%), Gaps = 79/319 (24%)
Query: 2 KKKITSPFCFPGELNMQRRLSEP------SQLDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
KKK+ + FP L+M + L+ P S+ + Y+L AVLIHKG + N GHY+A IKD
Sbjct: 308 KKKLNTFIRFPQTLDMGQYLNLPDKPHVSSRENYNYNLYAVLIHKGPSANCGHYVAQIKD 367
Query: 56 ENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHL 115
T QW++F+D+ V L + K+ + N+N++D
Sbjct: 368 NTTKQWYQFNDDKVEKLILKGINLCTDDDSKKL-------------KSMKTNKNYID--- 411
Query: 116 PSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIE---SEMIFFNDD 172
F SNDAYML+Y +D+K +++ E+ ++++ F+++
Sbjct: 412 ------------EFQSNDAYMLVY-----MKDTKAEELNTKSTTCELSPRLTQLVNFHNN 454
Query: 173 IF----LPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLE 228
F L S GK E ++ + ++++N E + SL+
Sbjct: 455 NFENKILESKQGKVFVEQMLHLINEMKHSQIKEN------------------EGDIISLQ 496
Query: 229 EPFYWISSDWLRQWADKIFP----STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
WL+ W K+ P + ++N I C H + K+ +K I S +K +
Sbjct: 497 ---------WLKYWM-KLNPNENVNEINNDPILCKHNLLDPDKVFEVKYIGSDFADKLYG 546
Query: 285 KYNGGPALT-NDDYCMTCL 302
Y GGP L C C+
Sbjct: 547 MYGGGPRLKLMSSLCQVCI 565
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 631 DKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSR--KTRSFVNLKVSASTSIYQLKM 688
D +SV G + + + +P R S+R + K S + VS+ +S+ LK+
Sbjct: 961 DTTVSVNSTSGSDTVSTSKNTNNHASQPGTRRSERKQMPKVESVI---VSSDSSLLHLKL 1017
Query: 689 MIWESLGVVKENQILHK--GQRIIDQECATLADLNIFPGDKLWVQDSE--IHEHRDIADE 744
I E V +NQ L G +++ E AT+ DL I P + Q E IH+ + E
Sbjct: 1018 KIMEVFHVKPDNQCLKTPDGIELLNHE-ATMEDLKILPDSVILAQFDEHVIHKPEVVIAE 1076
Query: 745 LSDQKMNVQHVEEGFRGTLLTS 766
E GF+GT L S
Sbjct: 1077 -----------ETGFKGTELMS 1087
>gi|350596925|ref|XP_003361808.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48, partial [Sus
scrofa]
Length = 689
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 131 SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSY 190
S +AYML+Y L+ ++ N I +P+ L + + N +
Sbjct: 63 SRNAYMLVYRLQTQEKP----------------------NTTIQVPAFLQELVDRDNSKF 100
Query: 191 LDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST 250
+ C + + + +D + +EV+ L P + EP+ ++S +WL++W D+ P+
Sbjct: 101 EEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQKWLDESTPTK 158
Query: 251 -LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTV 309
+DN + C H K+ KI MKRIS A + F+ +Y GGP LT C C+++ +
Sbjct: 159 PIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRVL 218
Query: 310 VCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADG 363
+ + K++ L + G ++V KS L+ W R+ L+ E D
Sbjct: 219 RLKNQLNEDYKTVNNLLKATVKGS---DGFWVGKSSLRSW-RQLALEQLDEQDA 268
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 587 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 646
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 647 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 686
>gi|402853301|ref|XP_003891335.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Papio anubis]
Length = 1014
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 173 IFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFY 232
+F+ S L + + N + + C + + + +D + +EV+ L P + EP+
Sbjct: 409 VFMCSFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYE 466
Query: 233 WISSDWLRQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPA 291
++S +WL++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP
Sbjct: 467 FVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPR 526
Query: 292 LTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTR 351
LT C C+++ + + + K++ L + G ++V KS L+ W R
Sbjct: 527 LTVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGN---DGFWVGKSSLRSW-R 582
Query: 352 RKNLDAPSEADGGPTTS 368
+ L+ E DG S
Sbjct: 583 QLALEQLDEQDGDAEQS 599
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 367 YKFNDEDIEKM 377
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 912 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 971
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 972 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1011
>gi|119615398|gb|EAW94992.1| ubiquitin specific peptidase 48, isoform CRA_f [Homo sapiens]
Length = 620
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 170 NDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEE 229
N + +P+ L + + N + + C + + + +D + +EV+ L P + E
Sbjct: 13 NTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--E 70
Query: 230 PFYWISSDWLRQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG 288
P+ ++S +WL++W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y G
Sbjct: 71 PYEFVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGG 130
Query: 289 GPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQ 348
GP LT C C+++ + + + K++ L + G ++V KS L+
Sbjct: 131 GPRLTVKALCKECVVERCRILRLKNQLNEDYKTVNNLLKAAVKG----DGFWVGKSSLRS 186
Query: 349 WTRRKNLDAPSEADGGPTTS 368
W R+ L+ E DG S
Sbjct: 187 W-RQLALEQLDEQDGDAEQS 205
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 518 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 577
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 578 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 617
>gi|328772848|gb|EGF82886.1| hypothetical protein BATDEDRAFT_86382 [Batrachochytrium
dendrobatidis JAM81]
Length = 803
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 132/541 (24%), Positives = 206/541 (38%), Gaps = 118/541 (21%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+K+KI FP ++M L +Q IY+L +VL+HKG + NSGHY+ + + +
Sbjct: 116 LKEKIHEKIEFPEWIDMSSFLVTAAQDSAIYELKSVLLHKGFSANSGHYVQRLYSQKYDK 175
Query: 61 WWEFDDEHVSNLGHHPF----GEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLP 116
W DDE VS + F +G SS +K + E+ ++ V++ L
Sbjct: 176 WLNLDDETVSIMPFPSFELDGSKGISSKSTKTANGK-------LEKTAAKSKVFVNISLK 228
Query: 117 SSEYYNGSNVER--------------FTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEI 162
N + E+ F+S+ AY L Y L SKR + D N +
Sbjct: 229 KQSLKNSNITEKSTAVTKQAQQATLTFSSSSAYQLTYVL-----SSKR---LVDGNLVFP 280
Query: 163 ESEMIFFNDD--IFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLS 220
E + D + +P + +I NR + E K ++ + + + S
Sbjct: 281 EETAVDSKKDAHMIIPKDMKAEIDLDNRDFHHQFETQITNKEMTVNILEAENVAWKQIFS 340
Query: 221 EAPVPSLEEPFYWISSDWLRQ-------WA-----------------DKIFPSTLD---- 252
+ PF +I + L + W D+I P D
Sbjct: 341 TWHTMDEKTPFVYIMTKNLAELLKKRAAWIANLRKSLYVLDDKKNSEDEIAPLDTDIAEQ 400
Query: 253 --------NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNG---GPALTNDDYCMTC 301
N + C H K+ K+ K+IS + K G P L +DD C+ C
Sbjct: 401 SDNLWSISNHDLLCAHSKLHPVKLWMTKKISQTGYE--LLKQLGISVDPMLYSDDICIDC 458
Query: 302 LIDGAHTVVCADSYRDRRKSLKGLAD--DVLSGKL---VEGTYYVSKSWLQQWTRRKNLD 356
+ ++ S + +K++K + D + + K V+ Y++SKSWL W +
Sbjct: 459 YQNVKQRII---SNAEHQKNVKMVFDALSIRNSKTHDPVQPGYFISKSWLNDWKKGITFV 515
Query: 357 APSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVP----EILWLFIYEDAMKVKPDDLLGC 412
AP+ G + C HG L ++R L+ EIL I+ D MK LG
Sbjct: 516 APNI--GNYKKDVWCAHGAL---SIHSSRRTLISSKSHEILQ-HIFPD-MKC----CLGN 564
Query: 413 STFPLDSEECPECSDALSEVACLE----DSIRARKLKERQNHEKLALGKSIPLSLDCKYY 468
T EC V C+E DS+ R L+ R N E P SLD
Sbjct: 565 DT------EC---------VLCIENHEQDSLEHRPLRIRANFEASRNHSLPPTSLDINSV 609
Query: 469 L 469
L
Sbjct: 610 L 610
>gi|260815082|ref|XP_002602303.1| hypothetical protein BRAFLDRAFT_94317 [Branchiostoma floridae]
gi|229287611|gb|EEN58315.1| hypothetical protein BRAFLDRAFT_94317 [Branchiostoma floridae]
Length = 1103
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 137/322 (42%), Gaps = 91/322 (28%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP L+M R L +P +++Y+L AVLIH+G + SGHYIA IKD+ + W
Sbjct: 370 KKKLNNYVRFPEVLDMSRYLRKPEN-EVVYELQAVLIHRGHSAYSGHYIAHIKDKASSCW 428
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G K+ + C+ E +EG + +
Sbjct: 429 YKFNDEEIQKM-----------EGKKL----QLGCE---EDIEGGQKQPK-----KPKLQ 465
Query: 122 NGSNVERFTSNDAYMLMYNLRR------------------------DKEDSKRKDVVHDV 157
GS+ R +AYML+YN R +++ K ++ V ++
Sbjct: 466 KGSHASR----NAYMLVYNRRMPEGEVIGDPLPVETAIPDRLMQMVHRDNQKFEEWVREM 521
Query: 158 NNMEIESE-----MIFFNDDI-FLPSHLGKDIKELNR---SYLDGCEQFKLRKNR----- 203
+M E M D + P+ +DI + R +Y+ C + +R
Sbjct: 522 KDMRDAQEFSKLLMSLLEDSTRYQPNPWVRDIMQQFRGQYAYVTRCNRCFQGSSRPSQFY 581
Query: 204 ELD-----------CISE------------RKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
ELD C+ E R QE+ L P E + WIS+DWLR
Sbjct: 582 ELDLNIQGHTDLSQCVEEFLQQQSVVSGKARHQEITELCDLMPAEE-GETYEWISTDWLR 640
Query: 241 QW-ADKIFPSTLDNTSIQCLHG 261
+W ++ P +DN+ + C HG
Sbjct: 641 EWLSESNAPRGVDNSKLTCTHG 662
>gi|350397621|ref|XP_003484934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Bombus
impatiens]
Length = 1150
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 123/591 (20%), Positives = 226/591 (38%), Gaps = 127/591 (21%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
+ WI +DWL +W D + P +DN+++ C H ++ K+ K I A + +
Sbjct: 629 YQWIPNDWLSKWLNGHLSVDGVPP--IDNSTLMCSHYRLDPLKVNRAKCIPVTAADLLYD 686
Query: 285 KYNGGPALTNDDYCMTCL------------IDGAHT-----------------VVCADSY 315
KY GGP L + +C C+ ++ H +V ADS
Sbjct: 687 KYRGGPRLDENSFCEICVKRRYKLLRFKISLERDHKEVSELVRNFKEPSETSYIVGADSL 746
Query: 316 RD-RRKSLKGLADDVLSGKLVE------GTYYVSKSWLQQWTRRKNLDAPSEADGGPTT- 367
R RR +++ DD+ E G+ SKS + + + L P E +
Sbjct: 747 RSWRRLAMEKFTDDMEQEIEDEDCQDPSGSQEDSKSGTSKES--EGLKEPVEGEENEVII 804
Query: 368 ----SIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECP 423
+ C H L K + R +VP W+ + K P+ + + + C
Sbjct: 805 YFNEDLLCEHSSL---KTPDSTRKIVPREAWVIL----RKYFPES----KEYSIGAASCS 853
Query: 424 ECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTKW 478
C + + + + + ++R L G++ L C+ +Y++ +L W
Sbjct: 854 ICEEKMENAQKAKKDDKIKAKQQRDELNDLYHGRNRNEILKCEDPEKTFYIVEKGFLDSW 913
Query: 479 RNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
R++I + + + I +G L CE H +G +Y + TI
Sbjct: 914 RSFIRYAEVFSKTPPVGIRNGF---LLCEPH-------------KGFLYSPSINNELYTI 957
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+T ++W + + VD+ I++ + N++
Sbjct: 958 ITADEWAKLMQFYD----------VDYP-------------IIIKKI--------NSDFH 986
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q P +C C+ R E ++ L Y I + V E + + + P
Sbjct: 987 TQ-------PSLCAACMLVRVEQERLESLKYDRATIYIKCVEDNEDTKLENDFEVAAKRP 1039
Query: 659 DRRASKRSRKTRSFVN---LKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECA 715
++ SR R+ LKVS+ ++ +LK+M + G +Q L G+ +
Sbjct: 1040 KMENTRPSRTRRNLKGSHELKVSSEITLKELKLMTMQICGAGPYDQHLMLGEHELTDHSQ 1099
Query: 716 TLADLNIFPGDKLWVQ-DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+LA L IFPG L ++ D+ I D+ + ++ + E+GF+GT L
Sbjct: 1100 SLAALGIFPGALLTLKIDTPIENEADVTSDANNPESTFP--EKGFKGTELV 1148
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K+ S FP +L+M + P Q L Y+L AVL HKG + +SGHYIA I + N G+W
Sbjct: 306 KRKLNSFIQFPEDLDMSEYVRCPPQTHL-YNLVAVLSHKGPSAHSGHYIANICNSN-GEW 363
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G S + SKVV+
Sbjct: 364 YQFSDDKVEKMQNKRIEDGVSEN-SKVVK 391
>gi|340724598|ref|XP_003400668.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
48-like [Bombus terrestris]
Length = 1149
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 123/591 (20%), Positives = 226/591 (38%), Gaps = 127/591 (21%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
+ WI +DWL +W D + P +DN+++ C H ++ K+ K I A + +
Sbjct: 628 YQWIPNDWLSKWLNGHLSVDGVPP--IDNSTLMCSHYRLDPLKVNRAKCIPVTAADLLYD 685
Query: 285 KYNGGPALTNDDYCMTCL------------IDGAHT-----------------VVCADSY 315
KY GGP L + +C C+ ++ H +V ADS
Sbjct: 686 KYRGGPRLDENSFCEICVKRRYKLLRFKISLERDHKEVSELVRNFKEPSETSYIVGADSL 745
Query: 316 RD-RRKSLKGLADDVLSGKLVE------GTYYVSKSWLQQWTRRKNLDAPSEADGGPTT- 367
R RR +++ DD+ E G+ SKS + + + L P E +
Sbjct: 746 RSWRRLAMEKFTDDMEQEIEDEDCQDPSGSQEDSKSGTSKES--EGLKEPVEGEENEVII 803
Query: 368 ----SIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECP 423
+ C H L K + R +VP W+ + K P+ + + + C
Sbjct: 804 YFNEDLLCEHSSL---KTPDSTRKIVPREAWVIL----RKYFPES----KEYSIGAASCS 852
Query: 424 ECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTKW 478
C + + + + + ++R L G++ L C+ +Y++ +L W
Sbjct: 853 ICEEKMENAQKAKKDDKIKAKQQRDELNDLYHGRNRNEILKCEDPEKTFYIVEKGFLDSW 912
Query: 479 RNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
R++I + + + I +G L CE H +G +Y + TI
Sbjct: 913 RSFIRYAEVFSKTPPVGIRNGF---LLCEPH-------------KGFLYSPSVNNELYTI 956
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+T ++W + + VD+ I++ + N++
Sbjct: 957 ITADEWAKLMQFYD----------VDYP-------------IIIKKI--------NSDFY 985
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q P +C C+ R E ++ L Y I + V E + + + P
Sbjct: 986 TQ-------PSLCAACMLVRVEQERLESLKYDRATIYIKCVEDNEDTKLENDLEVAAKRP 1038
Query: 659 ---DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECA 715
+ R S+ R + LKVS+ ++ +LK+M + G +Q L G+ +
Sbjct: 1039 KIENTRPSRTRRNLKGSHELKVSSEITLKELKLMTMQICGAGPYDQHLMLGEHELTDHSQ 1098
Query: 716 TLADLNIFPGDKLWVQ-DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+LA L IFPG L ++ D+ I D+ + ++ + E+GF+GT L
Sbjct: 1099 SLAALGIFPGALLTLKIDTPIENEADVTSDANNPESTFP--EKGFKGTELV 1147
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K+ S FP +L+M + P Q L Y+L AVL HKG + +SGHYIA I + N G+W
Sbjct: 306 KRKLNSFIQFPEDLDMSEYVRCPPQTHL-YNLVAVLSHKGPSAHSGHYIANICNSN-GEW 363
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G S + SKVV+
Sbjct: 364 YQFSDDKVEKMQNKRIEDGVSEN-SKVVK 391
>gi|452822194|gb|EME29216.1| ubiquitin carboxyl-terminal hydrolase 48 [Galdieria sulphuraria]
Length = 1050
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 194/841 (23%), Positives = 327/841 (38%), Gaps = 187/841 (22%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K + FP E+++ L+ + Y L A+ H+G++ GHY + D+++ +W
Sbjct: 316 KRKTHAKVSFPLEMDVHELLNMDTNEVKTYRLKAICFHRGSSAYCGHYTVQLFDDSSNKW 375
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+EFDD V + S S + S +ER + A D +
Sbjct: 376 FEFDDAQVKCCVSNSSAWKSDSPSGNGLDSVS------NERRKRAKLRLFD------KSA 423
Query: 122 NGSNVER--FTSNDAYMLMY----NLRR--DKEDSKRKDVVHDVNNMEIESEMIFFNDDI 173
NG+ R +S A +L+Y N+ R D E+S+ D++ D+ N+E I F +
Sbjct: 424 NGTTNRRPTLSSTSACLLVYVLSDNMYRFGDLEESRLPDLLQDIINLENSELDIAFEVE- 482
Query: 174 FLPSHLGKDIKELNRS---YLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEP 230
+ + + E+ R YL + R CI E L+S +P
Sbjct: 483 --KASVDSKVSEMERQKSEYLSLLPKLSART-----CI-----ETSDLVSYGYIP----- 525
Query: 231 FYWISSDWLRQWAD----KIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKY 286
+ WLR+W + P +D + C HG + I +KR++ +A++ KY
Sbjct: 526 -----TSWLREWVKVRDGSMMP--IDCSPYICEHGGLNPQSIIHVKRVAQEAFDWLIEKY 578
Query: 287 NGGPALTNDD--YCMTCLIDGAHTVVCADSYRDRRKSLKGLA------DDVLSGKLVEG- 337
L +CM C+ + V A+ ++ R +V+S K
Sbjct: 579 GANSLLLRGPQCHCMVCVDNLKDHVANAEFWKQRNDEFTSYLMNPKDNINVISEKKDLSP 638
Query: 338 ---TYYVSKSWLQQWTRRKNLDAPSEAD---------GGPTTSIRCPHGQLMPEKAGGAK 385
Y+ K++ ++W ++ +L D + S C H +L+ E
Sbjct: 639 NCPVSYIEKNFFKRW-KKLSLSCKHGVDFVRKLTKLVKEFSLSRYCVHEKLIVEDWKEIS 697
Query: 386 RLLVPEI--LWLFIYEDAMKVKPDDLLGCSTFPLDSEE--CPECSDALSEVACLEDSIRA 441
L + L F+ D +V+ D + F DS C EC + +E+ SIR
Sbjct: 698 CSLGKHLYDLLQFLSRDT-EVRFDYFI---VFQNDSHATFCDECHEKSTEMKEEISSIRQ 753
Query: 442 RKLKERQN-----HEKLALGKSIPLSLDCKY---------------YLLPSTWLTKWRNY 481
K E+ + K +L L KY YL+ S+W KW +Y
Sbjct: 754 LKRLEKASLGELMKPKYSLQVVRFLVQQMKYRQTEGRTSASNEESRYLISSSWFEKWSDY 813
Query: 482 ISPSGKNASSIEPEI--LDGVIDSLKCEKHLRL--LERPPDLVCKRGSIYQKGSATDGLT 537
+ +GK PEI L+G+I CE +L L L DL +R SA+ G
Sbjct: 814 LLNNGK-----RPEISPLEGLI----CEHNLLLYDLSTADDLFDRRVLCV---SASCGEE 861
Query: 538 IVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEI 597
IV +F + G+K + E+ G CK +
Sbjct: 862 IVKAYIDGYF--DVNGVKLE-----------LKEEMDGCCKGVF---------------- 892
Query: 598 ESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKD-ISVFLVRGKEAPR---------S 647
+ P C DC+ +R+ E +KD I + L++ E +
Sbjct: 893 --------SIPN-CYDCMKKRKDPE--------NKDEIELVLIKVNEMEQVQDKRYLSLD 935
Query: 648 ILEASESMFEPDRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQ 707
LE + + + ++RSR R ++ + S SI +LK++I++ L + Q L+ G+
Sbjct: 936 SLELYSTCIKSEMMTTRRSRVLR----VQCNRSNSISELKLIIFQYLDIAPVAQELYLGK 991
Query: 708 RI-IDQECATLADLNIFPGDK--LWVQDSEI-HEHRDIADELSDQKMNVQHVEEGFRGTL 763
+ + ++L D NI G L++ S+I + D D K VE GF G+
Sbjct: 992 GMSLVHASSSLKDYNISDGSLLFLYIDKSKIDNGSEDFCALPEDSK-----VELGFMGSQ 1046
Query: 764 L 764
L
Sbjct: 1047 L 1047
>gi|302847897|ref|XP_002955482.1| flagellar-specific protein Ssa14 [Volvox carteri f. nagariensis]
gi|300259324|gb|EFJ43553.1| flagellar-specific protein Ssa14 [Volvox carteri f. nagariensis]
Length = 2978
Score = 79.0 bits (193), Expect = 9e-12, Method: Composition-based stats.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 232 YWISSDWLRQWA-DKIFPSTLDNTSIQCLHGKVPESKI-GSMKRISSKAWNKFFF----- 284
YW+ S WL QWA D+ PS +DN++I + S + S KR KA + F
Sbjct: 799 YWVPSAWLEQWANDEGSPSPIDNSAI------IASSSLEASGKRGEGKARHAVLFPAIAA 852
Query: 285 KYNGGPALTNDDYCMTCLIDGAHTVVC---ADSYRDR---------------------RK 320
+ GGP L D C CL + + + A+ R R
Sbjct: 853 AHGGGPPLAAGDVCRECLANNFNATLLGSQANKVRSRVAAILEEAAAAAAAGGGEEAVDD 912
Query: 321 SLKGLADDVLSGKLVEGT------YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHG 374
++ + + G T ++VSK WLQ W++R+ A +A+ PT + CPHG
Sbjct: 913 EVECMGEKEAGGGSFAATAAAGRRFWVSKMWLQGWSKRQG--ASVKAEKSPTADLACPHG 970
Query: 375 QLMPEK-AGGAKRLLVPEILWLFI 397
QL+P A+R+ VP +W F+
Sbjct: 971 QLLPAAIVKSARRVAVPGDVWCFL 994
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHP 76
+Y+L +LIHKG+ +SGHY+A IKD+ TGQWW FDD+ +G++P
Sbjct: 374 LYELVGILIHKGSQASSGHYVAHIKDQVTGQWWRFDDDSADCIGYNP 420
Score = 42.7 bits (99), Expect = 0.74, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 602 PVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKE---APRSILEASESMFEP 658
P +R +P +C + E L+Y + +I V LV E A R+ ++A E
Sbjct: 1366 PELRVWPPVCPQALAEHNRAAREALLSYQEAEIMVELVPADELEGAFRATIQAPER---- 1421
Query: 659 DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILH-KGQ----RIIDQE 713
K R + + L VS +T++ QL++ ++E L + NQ L+ +G+ R+++ +
Sbjct: 1422 -----KSRRSRKGRLALTVSNTTTLQQLRLRVFEQLSIHPRNQSLYVRGEGGCPRLLEGD 1476
Query: 714 CATLADLNIFPGDK 727
+LA + PG++
Sbjct: 1477 DLSLAQHEVLPGEE 1490
>gi|441671289|ref|XP_003271620.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1
[Nomascus leucogenys]
Length = 574
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 223 PVPSLEEPFYWISSDWLRQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNK 281
P+ + EP+ ++S +WL++W D+ P+ +DN + C H K+ KI MKRIS A +
Sbjct: 17 PMLAFSEPYEFVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADI 76
Query: 282 FFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYV 341
F+ +Y GGP LT C C+++ + + + K++ L + G ++V
Sbjct: 77 FYSRYGGGPRLTVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKAAVKGN---DGFWV 133
Query: 342 SKSWLQQWTRRKNLDAPSEADG 363
KS L+ W R+ L+ E DG
Sbjct: 134 GKSSLRSW-RQLALEQLDEQDG 154
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 472 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 531
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 532 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 571
>gi|328723336|ref|XP_001942636.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like
[Acyrthosiphon pisum]
Length = 1196
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 161/371 (43%), Gaps = 70/371 (18%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLD------LIYDLSAVLIHKGTAVNSGHYIALIKD 55
KKK+ + F L+M + L+ P +LD IY+L AVLIHKG++ SGHY+A IKD
Sbjct: 310 KKKLNTYIQFSQTLDMAQYLNLPVELDESSKENHIYNLCAVLIHKGSSAYSGHYVAHIKD 369
Query: 56 ENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHL 115
+W++ +DE+V L G+G + +C ++ G
Sbjct: 370 IAAEEWYKMNDENVEKLK----GKGLN------------LCTEDEFKLNG---------- 403
Query: 116 PSSEYYNGSNVER--FTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDI 173
S+ +++ +N+AYML+Y + + + +N E+ +I
Sbjct: 404 --SKVTKAPKIQKGMLQTNNAYMLVY-----MHHTMITKLKTESSNWELSPRLI------ 450
Query: 174 FLPSHLGKDIKELNRSYLDGCEQFKLRKNREL--DCISERKQEVRSLLSEAPVPSLEEPF 231
HL ++ N ++ + ++ NRE D +++ +L++E S++E
Sbjct: 451 ----HL---VEARNNNFENTI--LNIKSNREYVEDKDKVFVEQMLNLITEMNSVSVKEKK 501
Query: 232 Y-WISSDWLRQWADKIFPST----LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKY 286
IS WL W KI P+ + N +I C H + K+ K I ++ +K + Y
Sbjct: 502 KEAISLQWLNYWF-KITPNQNVKEISNCAILCKHNLLDPDKVHEAKYIGTELADKLYGIY 560
Query: 287 NGGPAL-TNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADD-----VLSGKLVEGTYY 340
GGP L N C C+ + + ++ K++ + ++ + E +Y+
Sbjct: 561 KGGPRLPLNSSICWKCVRNKCALIYTKTLTTEQNKTINTVLHSWNPSPSVNDENHEKSYW 620
Query: 341 VSKSWLQQWTR 351
V K L+ W R
Sbjct: 621 VGKDSLKSWRR 631
>gi|242219995|ref|XP_002475770.1| predicted protein [Postia placenta Mad-698-R]
gi|220725042|gb|EED79049.1| predicted protein [Postia placenta Mad-698-R]
Length = 1034
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 176/459 (38%), Gaps = 106/459 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDL-----------IYDLSAVLIHKGTAVNSGHYI 50
+KK FP ++M R L P + +Y+L VL+HKG + GHY
Sbjct: 213 RKKSKHTISFPTFIDMDRFLGPPEERKQRGKQNSGKSKNLYELRGVLLHKGASAYHGHYE 272
Query: 51 ALIKDENTGQWWEFDDEHVSNLGH----------HPFGEGSSSSGSKVVRSEPVVCQPVS 100
A + D W++F+DE V+ + P E S S+ QP
Sbjct: 273 AQVFDLQNKAWYQFNDETVTKIDSLEAKPNTSKDKPKAEADSKGKKANGHSQQ---QPKK 329
Query: 101 -ERVEGANENHVDVHLPSSEYYNGSNVERFT----SNDAYMLMYNLRRDKEDSKRKDVVH 155
RV+ ++ + + S G++ T S +AYML+Y+ D ++ KD V
Sbjct: 330 RRRVDSDSDIEIIEFVSSPPAPKGTSAPETTAYISSKEAYMLVYSRIDDNRKAEMKDCVA 389
Query: 156 DVNNMEIESEMIFFNDDIFLPSHLGKD-IKELNRSYLDGCEQFKLRKNRE----LDCISE 210
+ +M D P H + + LN ++ + C+ F +++ RE D I
Sbjct: 390 G-QSCGGGLKMRAATPDALTPPHRAQQAVSTLNDAHQEACKAF-VQRERETIARFDEIRN 447
Query: 211 RKQEVR---------------------------SLLSEAPVPSLEEPFY--WISSDWLRQ 241
R +EV + SEA VP+ ++ +S R+
Sbjct: 448 RMREVYKSWNITLRDQARSESPNGVQHADKADDTKTSEASVPAEQQTNVSDLVSDITPRE 507
Query: 242 WADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFK--YNGGPALTNDDYCM 299
A I + I C HGK+ K MK I+ A+ + + Y P L+ D C
Sbjct: 508 QASSI-------SEIVCSHGKLDPDKGSDMKLITKIAYERIATEDHYGWNPVLSPADVCE 560
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRK-NLDAP 358
C+ K++ + +D + ++VSK WL+ W K + +
Sbjct: 561 LCV-----------------KNMFTVGED-------DPGFWVSKQWLKDWRLTKPKMHSA 596
Query: 359 SEADGGPTTS-----IRCPHGQLMPEKAGGAKRLLVPEI 392
S+ D P + +RC HG L A+R + PEI
Sbjct: 597 SKGDLPPDAAEFVQHVRCEHGGLSANVT--ARRKISPEI 633
>gi|301627006|ref|XP_002942672.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Xenopus
(Silurana) tropicalis]
Length = 977
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 131 SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSY 190
S +AYML+Y L+ +++DV +V P+ L K ++ N +
Sbjct: 348 SRNAYMLVYRLK----TVEKQDVTFEV------------------PAFLQKLVELDNCKF 385
Query: 191 LDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST 250
+ C + + +D + SL +P + + ++ +WL++W D+ P+
Sbjct: 386 EEWCVEMVDMRRESVDXXXXXHSYIFSLCHSLLLP--DSAYEFVPLEWLQKWLDESTPTK 443
Query: 251 -LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTV 309
+DN+ C HGK+ KI MKRIS A + F+ +Y G P LT+D C C+++ +
Sbjct: 444 PIDNSKCLCSHGKLHPDKISLMKRISQHAADIFYKRYGGSPRLTDDALCKDCVVERCRVL 503
Query: 310 VCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
+ + KSL + L + EG +++ KS L++W
Sbjct: 504 RLKNQLNEDYKSLTNMVK--LPVESNEG-FWIGKSSLRRW 540
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL +L
Sbjct: 875 RRSTRHRKVRGERALLVSANQTLKELKIQIMHAFSVAPFDQNLSIEGKILSDDAATLGNL 934
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
I P + ++ E +AD + D M V EEGF+GT L
Sbjct: 935 GIVPESVILLKADE-----PMADYAAMDDVMQVCMPEEGFKGTGL 974
>gi|345313958|ref|XP_001517111.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48, partial
[Ornithorhynchus anatinus]
Length = 604
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 187 NRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI 246
N + + C + + + +D + +EV+ L P + EP+ ++S +WL++W D+
Sbjct: 10 NCKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQKWLDES 67
Query: 247 FPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDG 305
P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP L C C+++
Sbjct: 68 TPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLNVKALCKDCVVER 127
Query: 306 AHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADG 363
+ + + K + L ++ K EG ++V KS L+ W R+ L+ E DG
Sbjct: 128 CRVLRLKNQLNEDYKIVTNLLK--VTVKSNEG-FWVGKSSLRSW-RQLALEQLDEQDG 181
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L ++++ + ATL L
Sbjct: 502 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLNDDTATLGTL 561
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 562 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 601
>gi|392572822|gb|EIW65966.1| hypothetical protein TREMEDRAFT_11865, partial [Tremella
mesenterica DSM 1558]
Length = 773
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 118/568 (20%), Positives = 205/568 (36%), Gaps = 136/568 (23%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
Y+L AV+ H+G++ + GH+ + W +DE V+ P S +++
Sbjct: 328 YELQAVISHQGSSAHHGHFTCEVYSSEDDDWLFCNDEEVTLRSSRPNKRMRQGSNEVIIQ 387
Query: 91 SEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKR 150
+E +S DAYML+Y +R R
Sbjct: 388 AEKTT---------------------------------KSSKDAYMLVYKRKR-----SR 409
Query: 151 KDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISE 210
D+++ + I S + LP KD + K N ++ C +
Sbjct: 410 SDLIN--GHQAIASSHV-----QPLPVTSVKD---------EMAAMAKEASNGDVQCHNG 453
Query: 211 RKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI----FPSTLDNTSIQCLHGKVPES 266
K S L+ A +P E + D L +W + LD ++C HG +
Sbjct: 454 DKG--LSDLATAILPPDE---VIVPRDALSKWFKTTQLDELSTPLDFEPVKCSHGAIDPI 508
Query: 267 KIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLA 326
K + IS +AW++ + P L D C TC+ +G + + +R++ L
Sbjct: 509 KTPDCRLISRQAWDRI----SSHPTL---DICETCVKEGFNRRLAEMEHRNQVVVFNELI 561
Query: 327 DDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR 386
+ EG Y + WLQ W ++ P + P + C HG+L P
Sbjct: 562 GE-------EGEYLLPSRWLQDWD--NSICTPPDLPNHPNYELLCDHGELFP-------- 604
Query: 387 LLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACL----EDSIRAR 442
+P L + + +A++ +D+ C C + + +D R
Sbjct: 605 -TLPNTLSISV--EALQYLRSLFENLDLPRIDTPICLVCEENRPSSKVVKVHNDDVTYDR 661
Query: 443 KLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDGVID 502
KLK + + P+ D ++Y+LP + T W NYI G+ +
Sbjct: 662 KLKREVD--------AAPMIFDEEFYVLPEEFYTNWSNYI--KGQAGKPV---------- 701
Query: 503 SLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVI 562
+ER + CK G + T+ L ++ + W++ E++G VI
Sbjct: 702 ----------MER---MTCKHGGL-DIDPTTESLEYISSSGWQFLSEKYGTQS----PVI 743
Query: 563 VDFSNNAGNELVGSCKEILLSEEP-CGP 589
V F N L G+ ++ P C P
Sbjct: 744 VKF---GANRLEGASTSVIQFSPPICDP 768
>gi|58271592|ref|XP_572952.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229211|gb|AAW45645.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1209
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 123/543 (22%), Positives = 206/543 (37%), Gaps = 146/543 (26%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L ++ H+GT+ GH++ DE+ W+ +DE +V
Sbjct: 340 VYELKGIISHQGTSAYHGHFVCETYDESNDTWYICNDE--------------------LV 379
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSK 149
+ +PV H + L E + +S DAYML+Y RRD S
Sbjct: 380 QPKPV-------------RPHKKIKL---EKPGDDKGKLESSKDAYMLVYK-RRDGHVSP 422
Query: 150 RKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCIS 209
+ F P+ + + +KE NR + + +RK
Sbjct: 423 Q-----------------------FPPAIVMEKVKEENRGLREELNKVGVRK-------- 451
Query: 210 ERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPS------TLDNTSIQCLHGKV 263
E ++ L A V + Y + D L +W PS D +SI C H +V
Sbjct: 452 EVLEDEWEHLKGAKV----DTDYIVPRDALAKWIQS--PSFQDLYKPFDYSSILCAHSQV 505
Query: 264 PESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLK 323
K ++ IS+ A +K Y P + D C+ C+ +G V S +++ +L+
Sbjct: 506 DPLKSSDIRTISALAHDKLLL-YTSLPEI---DVCLICVAEG---FVARSSITEQQSALE 558
Query: 324 GLADDVLSGKLVEGT------YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLM 377
D L+ K + + K+WL W R P + ++ CPH +
Sbjct: 559 AF--DELNAKAELEEGGEEERWCLPKTWLIHW--RTGKLPPQTLPTHSSYTLLCPHNAPL 614
Query: 378 PEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLED 437
P + P + FI A+ + +F + CPECS E
Sbjct: 615 PSSSA-------PPV--TFITSSALSLLHSIFGSFPSFQPGTPPCPECS--------FEA 657
Query: 438 SIRARKLKERQNHEKLALGKSIPLSLDCK-------YYLLPSTWLTKWRNYI-SPSGKNA 489
A L + + K L KSI LD + YY+LP ++ KW Y+ +P+G+
Sbjct: 658 DQNAESLAQWKTDVK--LDKSIKRHLDPRPPAFGLDYYVLPKEFIEKWEVYMKTPAGE-- 713
Query: 490 SSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCE 549
+PE LD + +CE LL+ P + +R +++E W+ C+
Sbjct: 714 ---KPE-LDMGLGRGRCEHG--LLDWDPQMEKQR--------------VISEIGWEMLCQ 753
Query: 550 EWG 552
++G
Sbjct: 754 KYG 756
>gi|395333428|gb|EJF65805.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1200
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 178/819 (21%), Positives = 287/819 (35%), Gaps = 156/819 (19%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS---NLGHHPFGEGSSSSGS 86
+Y L +L+HKG + GHY A + D W++F+DE V+ +L S GS
Sbjct: 413 LYALRGILLHKGASAYHGHYEAQVFDVKNQAWYQFNDETVTKIESLVPKLDAGKKGSKGS 472
Query: 87 KVVRSEPVVCQPVSER------------VEGANENHVDVHLPSSEYYNGSNVERFTSNDA 134
K ++P +P +R VE + + P+ E E +S DA
Sbjct: 473 KKPATQPPKGRPPKKRRRIDDSDSEIEIVESSERSQRGEGSPARE-----GPEYISSKDA 527
Query: 135 YMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGC 194
YML+Y R D R N + + P + + LN +
Sbjct: 528 YMLVY-ARVDH--PSRPGPCQPANGHASNGASQTDDRQVNPPPRALEVVNRLNAVHRKAR 584
Query: 195 EQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW---------ADK 245
E + R+ + + VR + V S +E +S L W A K
Sbjct: 585 EDYTKREREARERFDRIRSIVRDIYRTWNVESRDEECVVVSRQALEAWLSRHVAQPKASK 644
Query: 246 IFPSTLDNTS-----------------------------IQCLHGKVPESKIGSMKRISS 276
P T S + C HGK+ K MK I +
Sbjct: 645 TSPMTSPGPSKDAVPKAEETASSTSSEAGPSAVTIPVSDVVCSHGKLDPEKAHDMKVIKA 704
Query: 277 KAWNKFFFKYNG------GPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVL 330
F + G P LT D C TC+ + Y+ L DDV+
Sbjct: 705 A----FHSRIAGEDDCLLSPRLTTQDVCATCV----QRMFTEKLYQVEHPQLVSQFDDVV 756
Query: 331 SGKLVEGTYYVSKSWLQQWT-RRKNLDAPSEADGGPTTS-----IRCPHGQLMPEKAGGA 384
+ + E YY+SK+WL+ W R + D P + C HG L +A A
Sbjct: 757 ALEGDEDGYYISKAWLKDWRLARPKMHVEGATDPSPDAEEYLRDVVCEHGGLATNQA--A 814
Query: 385 KRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRARKL 444
+R + E + +L P S E +AL ++ ED RK
Sbjct: 815 RRRISAEACAIL----------QELFPNWRPPSTSTEPCAVCEALLHIS-KEDKREYRKQ 863
Query: 445 KERQN------HEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILD 498
E + H+ AL L D ++PS ++ WR ++ G+ + PE +D
Sbjct: 864 AEEEKARLKHMHDN-ALNGLTALLEDVPCAIVPSQFVRAWRQWVMRPGEVS---RPETVD 919
Query: 499 GVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGIKEKG 558
S CE H +L P G + IV +DW E +
Sbjct: 920 N--SSFVCE-HGQLAFNP----------NVPGDMDTSMAIVRLSDWSALKELYSA----- 961
Query: 559 LSVIVDFSNNAGNEL--VGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDCIG 616
++ N G + + C + L +R E+ +G
Sbjct: 962 -GPLIAIENTGGKYIHDLPVCLDCRL-----------------KRRTSFEMTEVTIRVLG 1003
Query: 617 ERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTRSF---V 673
+ Q NY D+ + + + + L R SKR R+ R +
Sbjct: 1004 PSDPTPTPQ--NYSDEPLPHSPTKPVQ---TTLHKYGKRQNEGSRKSKRIRQVREYGKRR 1058
Query: 674 NLKVSASTSIYQLKMMIWESLGV-VKENQILHKGQRIIDQECATLADLNIFPGDKLWVQD 732
+ ++ + S+ +L++M+ + LG+ V ++ ++G + D AT+ L I D L +++
Sbjct: 1059 RITITKAMSVKELRVMLSDELGIPVISQRLFYRGHELNDSS-ATMLSLGILSNDLLDLKE 1117
Query: 733 --SEIHEHRDIADELSDQKMNVQHVEEG--FRGTLLTSN 767
+I D +E + + EG F GTLL N
Sbjct: 1118 ESEDITILTDSDNEAPTGENGKKKRTEGQAFGGTLLGGN 1156
>gi|383854740|ref|XP_003702878.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Megachile
rotundata]
Length = 1129
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 220/591 (37%), Gaps = 125/591 (21%)
Query: 229 EPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKF 282
E + WI SDWL +W D + P +DN+++ C H ++ K+ K + A N
Sbjct: 608 EKYQWIPSDWLSKWLNGHSSIDGVPP--IDNSTLMCSHHRLDPLKVNRAKCMPVSAANLL 665
Query: 283 FFKYNGGPALTNDDYCMTCL------------------------------IDGAHTVVCA 312
+ KY GGP L C C+ ID ++ +V A
Sbjct: 666 YDKYRGGPRLDETSLCEVCVKRRYKLLRFKMSLERDYKEVSELIRNFKESIDTSY-IVGA 724
Query: 313 DSYRD-RRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSI-- 369
DS + RR +++ D + E + + + T ++N D EA G I
Sbjct: 725 DSLKSWRRLAMEKFMDSMEQEIEKEECQNRNGPQVSKSTSKEN-DRLKEAGDGEEHEIII 783
Query: 370 ------RCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECP 423
C H L K + R +VP W+ + K P+ + + S C
Sbjct: 784 YFNEDLLCEHNSL---KTPDSSRKVVPREAWMIL----RKYFPES----KEYSIGSSSCS 832
Query: 424 ECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTKW 478
C + + + + + +++ L G++ L C+ +Y++ ++L W
Sbjct: 833 ICEEKMENAQKAKKDDKIKAKQQKDELNDLYHGRNRSEILKCEDPEKVFYIVEKSFLDSW 892
Query: 479 RNYISPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
R++I + + + I + V L CE H +G +Y +D TI
Sbjct: 893 RSFIRYAEVFSKTPPAGIRNSV---LLCEPH-------------KGFLYSPTITSDLYTI 936
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
VT +W L+ D + V S ++
Sbjct: 937 VTAEEWS------------RLTQFYDVDHTISIRRVDSDFQL------------------ 966
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
P +C C+ R E ++ L Y I + V E ++ E + P
Sbjct: 967 --------HPNLCAACMLARVEQERLESLKYDRATIYIKCVEETEDSKTENEPEVAAKRP 1018
Query: 659 ---DRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECA 715
+ R S+ R + LKVS+ ++ LK+ + + G +Q L G+ +
Sbjct: 1019 KIENARPSRTRRNLKGSHELKVSSEITLKDLKLRMMQICGAGPYDQHLMLGEHELTDHSQ 1078
Query: 716 TLADLNIFPGDKLWVQ-DSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+LA L IFPG L ++ D+ I D+ + ++ + + E+GF+GT L
Sbjct: 1079 SLAALGIFPGALLTLKIDTPIENEADVTADANNPESSCP--EKGFKGTELV 1127
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+K+ S FP +L+M + P Q L Y L AVL HKG + +SGHYIA I + N G+W
Sbjct: 306 KRKLNSFIQFPEDLDMSEHVRCPPQTHL-YSLVAVLSHKGPSAHSGHYIANICNSN-GEW 363
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G + + + R
Sbjct: 364 YQFSDDKVEKMQNKRIEDGVNDNAKVIKR 392
>gi|350585724|ref|XP_003356231.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Sus
scrofa]
Length = 312
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 201 KNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST-LDNTSIQCL 259
+ + +D + +EV+ L +P+ EP+ ++S +WL++W D+ P+ +DN + C
Sbjct: 5 RKQSVDKGKAKHEEVKELYQR--LPAGAEPYEFVSLEWLQKWLDESTPTKPIDNHACLCS 62
Query: 260 HGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRR 319
H K+ KI MKRIS A + F+ +Y GGP LT C C+++ + + +
Sbjct: 63 HDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRVLRLKNQLNEDY 122
Query: 320 KSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
K++ L + G ++V KS L+ W
Sbjct: 123 KTVNNLLKATVKGD----GFWVGKSSLRSW 148
>gi|66267357|gb|AAH95783.1| Zgc:112364 [Danio rerio]
Length = 514
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP L+M+ L E + Y+LSAVLIH+G + SGHYIA ++D +T W
Sbjct: 303 KKKLNTFISFPEVLDMEPFL-EGREEKCTYELSAVLIHRGVSAYSGHYIAHVRDAHTNDW 361
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + + H
Sbjct: 362 YKFNDEEIEKMEGKKLQLGIEEDIAETAKSQ-------TRKPKCSKGYHC---------- 404
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y K ++N E + +P+ L K
Sbjct: 405 ---------SRNAYMLVY-----------KQQTEEINQTE---------SPVDVPAFLQK 435
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+++ NR + + C + + + +D + +EV+ L P + + ++ +WL++
Sbjct: 436 LVEQDNRKFEEWCSEMSDMRKQSVDKGKAKHEEVKELYELLPAED-GQSYEFVPLEWLKK 494
Query: 242 WAD 244
W D
Sbjct: 495 WLD 497
>gi|66820648|ref|XP_643907.1| ubiquitin-specific protease 48-like protein [Dictyostelium discoideum
AX4]
gi|60472337|gb|EAL70290.1| ubiquitin-specific protease 48-like protein [Dictyostelium discoideum
AX4]
Length = 1357
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 125/594 (21%), Positives = 226/594 (38%), Gaps = 124/594 (20%)
Query: 231 FYWISSDWLRQWADKI-FPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYN-- 287
+YWI +WL+ W + FP +DN++IQC HG V +K+ SMKRIS AW YN
Sbjct: 826 YYWIDVNWLKGWIQGLNFP--IDNSNIQCSHGSVDPNKLESMKRISPIAWEMI---YNSV 880
Query: 288 --GGPALTNDDYCMTCLID---GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT---- 338
GGPA + C CL + + +D SL+ + +
Sbjct: 881 GGGGPAFDSSSVCTECLYSIFFQTEELATNKNLKDYCISLEKVIPKSKNSSTTTAAATTT 940
Query: 339 ---------YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLV 389
YY+S W ++W K + PT + CPH E+ RL +
Sbjct: 941 TTTKSNLKEYYISYEWFKRW---KISNIEKRLSITPTNDLICPHDGFNLEEKD---RLPI 994
Query: 390 PEILWLFIYEDAMKVKPDDLLGCSTFPL-------DSEECPECSD-----------ALSE 431
W ++Y S +P+ D EC C + A E
Sbjct: 995 TRETWEYLY--------------SLYPMSKTLAVKDYSECLICRELDYKLNEKLELAKQE 1040
Query: 432 VACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRN-YISPS----- 485
++ + L ++ L++G +Y ++ WL WR+ I PS
Sbjct: 1041 KKDMKGLLALLSLTNKKKKPNLSVG---------QYNVISKDWLINWRSTVIDPSQDQEQ 1091
Query: 486 GKNASSIEPEILDGVI-DSLKCEKHLRLLERPPD---LVCKRGSIYQKGSATDGLTIVTE 541
++ S + + +D I ++ K L++ D +C+ S L ++
Sbjct: 1092 DQDGSEFQSDSIDESISNTTTTTKDLKIFIGIIDNSGFLCEHSKFQYDLSDQQFLNQLST 1151
Query: 542 NDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQR 601
++ + E L ++ + + L+++ G +D N E+ R
Sbjct: 1152 FS---LTDKTSRLSEINLPFLL---------IPKEIYDKLITK--YGSKDNINISFENNR 1197
Query: 602 PVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRR 661
++ F C+ C ++ L +KLN+ + + + + KE + + S F R
Sbjct: 1198 -LLEPFT-FCQQCFLIQQEIHLKKKLNFNNASLFIHRINDKENEKDLKYYS---FPTTFR 1252
Query: 662 ASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQ---ILHKGQRIID------- 711
S+ R S +N + ++ LK+ I+ + V Q IL + ++ D
Sbjct: 1253 TSRFFRNEISPIN----SDYTVEGLKLTIFSIMDVPPFKQRLFILTQDRKPGDPDSVIEL 1308
Query: 712 -QECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLL 764
+ CA L + P + ++ + E+ D D+ ++ + E GF+GT+
Sbjct: 1309 KESCAQLNWYKLVPNQIIVLK---VIENEDYFDDFIEE----SNYETGFKGTVF 1355
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFG 78
D Y+L+ +L+H+G + GHYI IKD+ TG+W+ F+DE V + G
Sbjct: 632 DFEYELTGILMHQGVGTSGGHYICQIKDDITGRWFTFNDETVEEIDIKSLG 682
>gi|134114612|ref|XP_774014.1| hypothetical protein CNBH0610 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256644|gb|EAL19367.1| hypothetical protein CNBH0610 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 987
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 204/550 (37%), Gaps = 160/550 (29%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L ++ H+GT+ GH++ DE+ W+ +DE +V
Sbjct: 340 VYELKGIISHQGTSAYHGHFVCETYDESNDTWYICNDE--------------------LV 379
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSK 149
+ +PV H + L E + +S DAYML+Y RRD S
Sbjct: 380 QPKPV-------------RPHKKIKL---EKPGDDKGKLESSKDAYMLVYK-RRDGHVSP 422
Query: 150 RKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCIS 209
+ F P+ + + +KE NR + + +RK
Sbjct: 423 Q-----------------------FPPAIVMEKVKEENRGLREELNKVGVRK-------- 451
Query: 210 ERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPS------TLDNTSIQCLHGKV 263
E ++ L A V + Y + D L +W PS D +SI C H +V
Sbjct: 452 EVLEDEWEHLKGAKV----DTDYIVPRDALAKWIQS--PSFQDLYKPFDYSSILCAHSQV 505
Query: 264 PESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLK 323
K ++ IS+ A +K Y P + D C+ C+ +G V S +++ +L+
Sbjct: 506 DPLKSSDIRTISALAHDKLLL-YTSLPEI---DVCLICVAEG---FVARSSITEQQSALE 558
Query: 324 GLADDVLSGKLVEGT------YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLM 377
D L+ K + + K+WL W R P + ++ CPH +
Sbjct: 559 AF--DELNAKAELEEGGEEERWCLPKTWLIHW--RTGKLPPQTLPTHSSYTLLCPHNAPL 614
Query: 378 PEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLED 437
P + P + FI A+ + +F + CPECS
Sbjct: 615 PSSSA-------PPVT--FITSSALSLLHSIFGSFPSFQPGTPPCPECS----------- 654
Query: 438 SIRARKLKERQNHEKLA-------LGKSIPLSLDCK-------YYLLPSTWLTKWRNYI- 482
+ QN E LA L KSI LD + YY+LP ++ KW Y+
Sbjct: 655 ------FEADQNAESLAQWKTDVKLDKSIKRHLDPRPPAFGLDYYVLPKEFIEKWEVYMK 708
Query: 483 SPSGKNASSIEPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTEN 542
+P G+ +PE LD + +CE LL+ P + R +++E
Sbjct: 709 TPGGE-----KPE-LDMGLGRGRCEHG--LLDWDPQMEKPR--------------VISEI 746
Query: 543 DWKWFCEEWG 552
W+ C+++G
Sbjct: 747 GWEMLCQKYG 756
>gi|159462706|ref|XP_001689583.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283571|gb|EDP09321.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2402
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K K F FP L+ SQ +Y+L +LIHKG+ +SGHY+A IKD+ +GQW
Sbjct: 313 KAKALDKFAFPLTLDF-------SQGSPLYELVGILIHKGSQAHSGHYVAHIKDQASGQW 365
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSK 87
W FDDE + +G P S G++
Sbjct: 366 WRFDDEVAACIGPDPAAAFQSDHGAQ 391
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 266 SKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGL 325
+K+ + K +S++AW + + GGP L D C CL A + + + +
Sbjct: 621 AKVAAAKLVSAEAWERLHAAHGGGPVLAAGDVCRQCLEGSASQALLGNQAEEAEWEEAEV 680
Query: 326 ADDVLSGKLVEG-TYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGA 384
+ + + + +++VS+ WLQ W++R+ A +A+ PT + CPHG+L P +A A
Sbjct: 681 EEAMDAEEDASPRSFWVSRLWLQGWSKRQG--ASVKAEKSPTADLACPHGELQPARA--A 736
Query: 385 KRLLVPEI 392
KR P +
Sbjct: 737 KRDDAPGL 744
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 461 LSLDCKYYLLPSTWLTKWRNYIS--PSGKNASSIEPEILDGVIDSLKCEKH---LRLLER 515
L+ C+YY++P++W+ +W+ Y+ P G A+ P L + + C H RL
Sbjct: 923 LTPGCQYYMVPTSWVREWQQYVRVLPKGTPAAP-RPSSLSAAMLRVLCPCHPDEPRLGVP 981
Query: 516 PPDL-VCKRGSIYQKGSATDGLTIVTENDW 544
PP L V KR + Q D + ++T+ DW
Sbjct: 982 PPRLTVSKRSRLSQLDLEQDPMRLITQEDW 1011
>gi|156352937|ref|XP_001622838.1| predicted protein [Nematostella vectensis]
gi|156209461|gb|EDO30738.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 202 NRELDCISE--------RKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPST--L 251
RE+D I E + E+RS+ P + + W+S+DWLR+W + +T +
Sbjct: 59 TREMDAIKESMITEGKMNQAEIRSIYEMLPAATTDYA-EWVSTDWLRKWLSDKYKATPPI 117
Query: 252 DNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCL 302
DN+S+ C HG++ K KRIS KA + + KY G P L D C C+
Sbjct: 118 DNSSLLCCHGRLSPEKYQYSKRISCKAADVLYTKYGGVPRLQRDSMCRECV 168
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 27 LDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
L +Y+LSAVL+H G++ SGHY+A I+D
Sbjct: 15 LSTVYELSAVLMHHGSSAYSGHYVAHIRD 43
>gi|426222012|ref|XP_004005199.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 [Ovis aries]
Length = 843
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 213/518 (41%), Gaps = 132/518 (25%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 181 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 239
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G K+ G E D+ PS
Sbjct: 240 YKFNDEDIEKM-----------EGKKLQL--------------GIEE---DLAEPSKSQT 271
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMI 167
+ T S +AYML+Y L+ + S V + D +N + E +EM
Sbjct: 272 RKPKCGKGTHCSRNAYMLVYRLQTQERPSTAVQVPAFLQELVDRDNSKFEEWCVEMAEMR 331
Query: 168 FFNDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSL--LS 220
+ D H +++KEL + G C++ + + R L ++ ++ +++ L
Sbjct: 332 KQSVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRVLRLKNQLNEDYKTVNNLL 389
Query: 221 EAPVPSLEEPFYWISSDWLRQW--------------AD----KIFPSTLD---------- 252
+A V S + +W+ LR W AD K+ +TL+
Sbjct: 390 KATVKSSDG--FWVGKSSLRSWRQLALEQLDEQDGDADQSNGKMNGNTLNKDESKEERKE 447
Query: 253 -------NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI- 303
N I C HG++ S+ + +S +AW+K + P ++ + C C I
Sbjct: 448 DEEELNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSSRECCSQCKIL 506
Query: 304 -------DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW- 349
+ H ++ +++ SL L D LS + + Y VS+ ++++W
Sbjct: 507 EREGEENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEETDVLYIVSQFFVEEWR 562
Query: 350 --TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFI 397
R+ +P + G +++ CPHG LM A K L+ P I LF+
Sbjct: 563 KFVRKPTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFV 620
Query: 398 YEDAMKVKPDDLLGCSTFPLDSEE------CPECSDAL 429
+ +K+ + G P +++ CPEC + L
Sbjct: 621 VDHVIKITRTE--GGDASPSETQYISEPKLCPECREGL 656
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 741 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 800
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 801 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 840
>gi|348524280|ref|XP_003449651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Oreochromis niloticus]
Length = 921
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 133/314 (42%), Gaps = 47/314 (14%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI+S FP E L+M+ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 605 KISSHVSFPLEGLDMRPFLAKESPSQVT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 662
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+EFDD++V+ + + V +E V E E V L + +
Sbjct: 663 WYEFDDQYVTEVHE-----------TVVQNAEAYVLFYRKSSEEAVRERQKVVALANMKE 711
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD--IFLPSH 178
++ +F + ++ +N + + M I + DD + +P +
Sbjct: 712 ---PSLLQFYISREWLNKFNTFAEPGPISNHTFLCQHGGMWIPPNKYHYIDDLVVIVPQN 768
Query: 179 LGKDI-------KELNRSYLDGCEQFKL-----RKNRELDCISERKQEVRSLLSEAPVPS 226
+ + + +N Y+ Q ++ R+ E+D + +E ++ EAP
Sbjct: 769 VWEYLYNSFGGGPAVNHLYMCAICQVEIEALAKRRKTEIDTFIKLNKEFQA--EEAPTVI 826
Query: 227 LEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGS-MKRISSKAW 279
L IS W R+W D P +DN+ I + G + K G+ +IS + W
Sbjct: 827 L-----CISMQWFREWESFVKGKDNEPPGPIDNSKIGVMKGGHIQLKQGADYGQISEETW 881
Query: 280 NKFFFKYNGGPALT 293
Y GGP +
Sbjct: 882 QYLLGIYGGGPEIA 895
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 31/230 (13%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 671 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQKVV--ALANMKEPSLLQ--FYISREWLN 725
Query: 241 QWADKIFPSTLDNTSIQCLHGK--VPESKIGSMKR----ISSKAWNKFFFKYNGGPALTN 294
++ P + N + C HG +P +K + + W + + GGPA+ +
Sbjct: 726 KFNTFAEPGPISNHTFLCQHGGMWIPPNKYHYIDDLVVIVPQNVWEYLYNSFGGGPAVNH 785
Query: 295 DDYCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 786 LYMCAICQVE-------IEALAKRRKTEIDTFIKLNKEFQAEEAPTVILCISMQWFREWE 838
Query: 350 --TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ H QL GA + E W ++
Sbjct: 839 SFVKGKDNEPPGPIDNSKIGVMKGGHIQL----KQGADYGQISEETWQYL 884
>gi|321453519|gb|EFX64747.1| hypothetical protein DAPPUDRAFT_333877 [Daphnia pulex]
Length = 374
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 1 MKKKITSPFCFPGELNMQRRLS----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
+KKK++S FP + M + PS L YDLSAVLIH+G + SGHYIA IKD
Sbjct: 181 LKKKVSSMVHFPFVVEMSNYVETQGVAPSSL--TYDLSAVLIHRGPSAYSGHYIAHIKDP 238
Query: 57 NTGQWWEFDDEHVSNLGHHPFGEG 80
TG W++F+DE V + F G
Sbjct: 239 VTGTWYKFNDEVVQKIEGTNFKLG 262
>gi|321453514|gb|EFX64742.1| hypothetical protein DAPPUDRAFT_65946 [Daphnia pulex]
Length = 347
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 1 MKKKITSPFCFPGELNMQRRLS----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
+KKK++S FP + M + PS L YDLSAVLIH+G + SGHYIA IKD
Sbjct: 178 LKKKVSSMVHFPFVVEMSNYVETQGVAPS--SLTYDLSAVLIHRGPSAYSGHYIAHIKDP 235
Query: 57 NTGQWWEFDDEHVSNLGHHPFGEG 80
TG W++F+DE V + F G
Sbjct: 236 VTGTWYKFNDEVVQKIEGTNFKLG 259
>gi|321453511|gb|EFX64739.1| hypothetical protein DAPPUDRAFT_117905 [Daphnia pulex]
Length = 184
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 1 MKKKITSPFCFPGELNMQRRLS----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
+KKK++S FP + M + PS L YDLSAVLIH+G + SGHYIA IKD
Sbjct: 15 LKKKVSSMVHFPFVVEMSNYVETQGVAPSSL--TYDLSAVLIHRGPSAYSGHYIAHIKDP 72
Query: 57 NTGQWWEFDDEHVSNL 72
TG W++F+DE V +
Sbjct: 73 VTGTWYKFNDEVVQKI 88
>gi|296206957|ref|XP_002750444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 3
[Callithrix jacchus]
Length = 970
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 205/512 (40%), Gaps = 120/512 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + D +N + E +EM
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ D H +++KEL + G C++ + + R L ++ ++ +++ + V
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKV 518
Query: 225 PSLEEPFYWISSDWLRQWAD------------------KIFPSTLD-------------- 252
+W+ LR W K+ STL+
Sbjct: 519 AVKGNDGFWVGKSSLRSWRQLALEQLDEQDGDAEQSNGKMNGSTLNKDESKEERKEEEEE 578
Query: 253 ---NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI----- 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 579 LNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREG 637
Query: 304 ---DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQWTRRKN 354
+ H ++ +++ SL L D LS + + Y VS+ ++++W RK
Sbjct: 638 EENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEW--RKF 691
Query: 355 LDAP---SEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYEDA 401
+ P S +++ CPHG LM A K L+ P I LF+ +
Sbjct: 692 VRKPARCSPVSSVGNSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVDHV 751
Query: 402 MKVKPDDLLGC----STFPLDSEECPECSDAL 429
+K+ ++ + + + + CPEC + L
Sbjct: 752 IKITRIEMGDVNPSETQYISEPKLCPECREGL 783
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 868 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 927
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 928 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 967
>gi|358411149|ref|XP_003581942.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 3 [Bos
taurus]
gi|359063421|ref|XP_003585841.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 3 [Bos
taurus]
Length = 970
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 212/516 (41%), Gaps = 128/516 (24%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ +P R GA+
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPAKSQTR--KPKCGR--GAH-------------- 408
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ + V + D +N + E +EM
Sbjct: 409 --------CSRNAYMLVYRLQTRERPGTPIQVPAFLQELVDRDNSKFEEWCVEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSL--LSEA 222
+ D H +++KEL + G C++ + + R L ++ ++ +++ L +A
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKA 518
Query: 223 PVPSLEEPFYWISSDWLRQW--------------AD----KIFPSTLD------------ 252
V S + +W+ LR W AD K+ +TL+
Sbjct: 519 TVKSSDG--FWVGKSSLRSWRQLALEQLDEQDGDADQSNGKMNGNTLNKDESKEERKEDE 576
Query: 253 -----NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI--- 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 577 EELNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILER 635
Query: 304 -----DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW--- 349
+ H ++ +++ SL L D LS + + Y VS+ ++++W
Sbjct: 636 EGEENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEETDVLYIVSQFFVEEWRKF 691
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYE 399
R+ +P + G +++ CPHG LM A K L+ P I LF+ +
Sbjct: 692 VRKPTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVD 749
Query: 400 DAMKVKPDDLLGCSTFPLDSEE------CPECSDAL 429
+K+ + G P +++ CPEC + L
Sbjct: 750 HVIKITRTE--GGDAHPSETQYISEPKLCPECREGL 783
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +++ +CATL L
Sbjct: 868 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKVLSDDCATLGTL 927
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 928 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 967
>gi|302692220|ref|XP_003035789.1| hypothetical protein SCHCODRAFT_105253 [Schizophyllum commune H4-8]
gi|300109485|gb|EFJ00887.1| hypothetical protein SCHCODRAFT_105253, partial [Schizophyllum
commune H4-8]
Length = 1338
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 190/525 (36%), Gaps = 101/525 (19%)
Query: 258 CLHGKVPESKIGSMKRISSKAWNKFFFKYNG--GPALTNDDYCMTCLIDGAHTVVCADS- 314
C HG++ S SMKRI A++K + P LT D C C+ V+ D
Sbjct: 855 CEHGELHPSNSTSMKRIRKDAYDKIAAQTRCVFVPLLTPQDVCRQCV-----EVIFKDRL 909
Query: 315 YRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRK-NLDAPSEADGGPTTS----- 368
Y+ L DD+ + Y++SK W++ W K + P D P +
Sbjct: 910 YQVEHPRLVSQFDDIAEVPEGQPGYWISKPWVKDWRLTKPKMHRPDTGDPAPDSDEFKDH 969
Query: 369 IRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDA 428
+ C HG+L+ A + L L ++ G P E C C+ A
Sbjct: 970 VLCEHGRLINNIANRRRISLEAGNLLQALFP-----------GLQLLPASEEPCAICAVA 1018
Query: 429 L--SEVACLEDSIRARKLKERQNHE-KLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPS 485
+ S+ LE +A K R H AL L D ++PS ++ W+ ++
Sbjct: 1019 IHSSKEGRLEARKKAEDEKARLKHMLDHALNGDTALLEDTPLAIVPSQFVRAWKMWL--- 1075
Query: 486 GKNASSIEPEILDGVIDSLKCEKHLRLL---ERPPDLVCKRGSIYQKGSATDGLTIVTEN 542
G+ P +D S CE H +L P D+ K L ++ +
Sbjct: 1076 GRPTEYPRPPGIDN--SSFFCE-HDQLAFDPNVPADMDSK-------------LAVIKRS 1119
Query: 543 DWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRP 602
DW E+L + PCGP E + +R
Sbjct: 1120 DW----------------------------------EVLQTLYPCGPLIALEKEAKEKR- 1144
Query: 603 VVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEPDRRA 662
R +C DC R+S ++ DI++ V G + + R
Sbjct: 1145 -YRHDIPVCVDCRQRRKS-------DWESTDITI-RVGGPDKAKPTTTKKTY----GSRQ 1191
Query: 663 SKRSRKTR---SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLAD 719
SKR R + + V+ TSI LK+MI L + Q L + +D AT+
Sbjct: 1192 SKRLRSVKEQGERRKMSVTKQTSIMGLKIMIQSELSIPTICQRLFYQGKELDDNKATMES 1251
Query: 720 LNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLL 764
L IF D + +++ + + ++ + E GF GTLL
Sbjct: 1252 LGIFANDTIDLREEQEKDSFSDTEDGEHAAKRQRSEERGFGGTLL 1296
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
IYDL VL+HKG++ GHY A + D W++F+DE V+ +
Sbjct: 424 IYDLRGVLLHKGSSAYHGHYEAQVYDTERACWFQFNDEIVTKI 466
>gi|5002571|emb|CAB44337.1| LSFR3 protein [Takifugu rubripes]
Length = 390
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 132/315 (41%), Gaps = 51/315 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E LNMQ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 76 KIGSHVSFPLEGLNMQPFLAKDSPSQVT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 133
Query: 61 WWEFDDEHVSNLGHHPFGEGSSS-------SGSKVVRSEPVVCQPVSERVEGANENHVDV 113
W+EFDD++V+ + H + + + S + VR V S + + ++
Sbjct: 134 WYEFDDQYVTEV-HETVVQNAEAYVLFYRKSSEESVRERQKVVALASMKEPSLLQFYI-- 190
Query: 114 HLPSSEYYNGSNV---ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFN 170
S E+ N N SN ++ + + D+V V E
Sbjct: 191 ---SREWLNKFNTFAEPGPISNHTFLCQHGGIPPNKYQYIDDLVVIVPQNVWE------- 240
Query: 171 DDIFLPSHLGKDIKELNRSYLDGCEQFKL-----RKNRELDCISERKQEVRSLLSEAPVP 225
+L + G +N Y+ Q ++ R+ E+D + +E ++ EAP
Sbjct: 241 ---YLYNRFGGG-PAVNHFYMCAICQVEIEALAKRRKMEIDTFIKLNKEFQA--EEAPTV 294
Query: 226 SLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGS-MKRISSKA 278
L IS W R+W D P +DN+ I + G + K G+ +IS +
Sbjct: 295 IL-----CISMQWFREWESFVKGKDNEPPGPVDNSKIGVMKGGHIQLKQGADYGQISEET 349
Query: 279 WNKFFFKYNGGPALT 293
W Y GGP +
Sbjct: 350 WQYLLGIYGGGPEIA 364
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 142 VTEVHETVVQNAEAYVLFYRKSSE-ESVRERQKVVA--LASMKEPSLLQ--FYISREWLN 196
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 197 KFNTFAEPGPISNHTFLCQHGGIPPNKYQYIDDLVVIVPQNVWEYLYNRFGGGPAVNHFY 256
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 257 MCAICQVE-------IEALAKRRKMEIDTFIKLNKEFQAEEAPTVILCISMQWFREWESF 309
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQL 376
+ K+ + P D ++ H QL
Sbjct: 310 VKGKDNEPPGPVDNSKIGVMKGGHIQL 336
>gi|320162607|gb|EFW39506.1| hypothetical protein CAOG_00031 [Capsaspora owczarzaki ATCC 30864]
Length = 1105
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 132/314 (42%), Gaps = 42/314 (13%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPS-QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
+ K++ P FP E L+M+ L+ S + + +Y L+AV+ H+G VNSGHY+A + +
Sbjct: 794 LSSKLSQPVQFPLEGLDMRPFLAPGSTETNTLYTLNAVVSHRG-GVNSGHYVAYAQHPQS 852
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSS 118
G+W+E+DD + + S V+ E + E E L
Sbjct: 853 GRWFEYDDSDTTEV-----------SVQDVLDQEAYILFYSRESAAVDKERSTVAQLMER 901
Query: 119 EYYNGSNVE--RFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLP 176
+Y + S+ R+ S ++ + + D+ + ++I E + +P
Sbjct: 902 DYQSASDASSVRYISKQ-WLASWMTLSNPGSISNGDLFCEHGGVQIHLESVIQTLVTPVP 960
Query: 177 SHLGKDIKELNRSYLDGCEQFKLRKN----RELDCISERKQEVRSLLSEAPVPSLEEPFY 232
+ + ++ +++ G E L RE + + +R+ E + ++ V + + +Y
Sbjct: 961 VSVFQYLQNVHQG---GPEIISLGSCSECWREAEQLQQRRDEETAAITRLDVCNEQGIWY 1017
Query: 233 WISSDWLRQWAD-------KIFPS-------TLDNTSIQCLHGKVPESKIGSMKRISSKA 278
IS+ WL+QW D + P LD + H K K+ + ++ K
Sbjct: 1018 IISAAWLKQWLDFKSSRDPNVLPPGPISNDRLLDANGVPLPHLK----KVTHYRGVNQKV 1073
Query: 279 WNKFFFKYNGGPAL 292
W F Y GGP +
Sbjct: 1074 WEYFMKHYGGGPTM 1087
>gi|390597862|gb|EIN07261.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1134
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 153/402 (38%), Gaps = 85/402 (21%)
Query: 2 KKKITSPFCFPGELNMQRRL-------SEPSQLDL--IYDLSAVLIHKGTAVNSGHYIAL 52
+KK FP L+M + S P + D +Y+L VL+H+GT+V+ GHY+A
Sbjct: 411 RKKSKHRISFPMTLDMSPFITAGANSDSNPPEGDAQDLYELRGVLLHRGTSVHRGHYVAQ 470
Query: 53 IKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD 112
+ + W+EF+DE VS L +GS E + C +R++ E
Sbjct: 471 VYQYSDRSWYEFNDEVVSRLDTASLDQGSG--------QESLAC--ADDRIDVEQE---- 516
Query: 113 VHLPSSEYYNGSNVERFT-----SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMI 167
H P G ++ T S DAYML+Y RR E D + N+++ S
Sbjct: 517 AHAPKRGKQRGKKPKKNTAKDDGSEDAYMLVY-ARRSMEPLGSTD-EREHGNVDLSSVGS 574
Query: 168 FFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSL 227
D + + ++ N + C +F R+ S+ +++V + + V
Sbjct: 575 PPEDALSI-------VRLANEKHRVACAEFIAREIEAARRFSDLRRQVMEIYARWQVLDA 627
Query: 228 EEPFYWISSDWLRQW--ADKIFPST----------------------------------- 250
+ + S + L+QW PS+
Sbjct: 628 NQRYVITSQNALKQWLLGPLGMPSSSVASAAKNGLTDVSIGTDPVSVHELIIELLQPDQK 687
Query: 251 LDNTSIQ---CLHGKVPESKIGSMKRISSKAWNKFFFKYNGG--PALTNDDYCMTCLIDG 305
LD S+ C H +V K K I+ A++ +GG P L D C C+I
Sbjct: 688 LDPISVTELICPHNQVEPKKSVLFKCITEGAYDS-ILSMDGGFKPRLVPKDICRQCVIAE 746
Query: 306 AHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQ 347
+ + +R+ L V + Y++SKSWL+
Sbjct: 747 FDERMYSIDHREAVTRLHAAPSMV-----NDQGYWISKSWLR 783
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 593 ENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLV--RGKEAPRSILE 650
EN ++ VV P +CE CI R +LN+ ++++ L G + + +
Sbjct: 901 ENQQVGDAYRVVHKIP-VCERCIESR-------RLNWVQIEMTIRLASSHGVQKNLAPTQ 952
Query: 651 ASESMFEPDRRASKRSRKTRSFV---NLKVSASTSIYQLKMMIWESLGVVKENQILH-KG 706
++ + R SKR R V +KV+ T++ L+M I + LG+ Q L+ +G
Sbjct: 953 SAPILQTAGPRKSKRLRDRDGGVRTTQVKVTKDTTVKHLRMSIQDQLGIPTIAQRLYLRG 1012
Query: 707 QRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKM--NVQHVEEGFRGTLL 764
Q + D T A+L I D L +Q EI E D D + + N + EGF GT L
Sbjct: 1013 QELKDN-TKTAAELEISTDDVLELQ--EISEDFDALDSDIEHEFSSNKRSRTEGFVGTKL 1069
Query: 765 TSNLS 769
S
Sbjct: 1070 VGRSS 1074
>gi|167527071|ref|XP_001747868.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773617|gb|EDQ87255.1| predicted protein [Monosiga brevicollis MX1]
Length = 900
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 16/80 (20%)
Query: 2 KKKITSPFCFPGELNM-----------QRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYI 50
KKK+T F FP L+M +RR S D +YDLSAVL+H+G++ GHY+
Sbjct: 354 KKKVTKAFRFPAVLDMSAFAKTTQGAKKRRSS-----DRLYDLSAVLLHRGSSATCGHYM 408
Query: 51 ALIKDENTGQWWEFDDEHVS 70
A I+ TG+W+ F+DE V+
Sbjct: 409 AQIRHPKTGKWFLFNDEEVT 428
>gi|168277702|dbj|BAG10829.1| ubiquitin carboxyl-terminal hydrolase 48 [synthetic construct]
Length = 969
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 208/514 (40%), Gaps = 125/514 (24%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + D +N + E +EM
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNREL---DCISERKQEVRSLLSE 221
+ D H +++KEL + G C++ + + R L + ++E + V +LL
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRILRLKNQLNEDYKTVNNLLKA 518
Query: 222 APVPSLEEPFYWISSDWLRQWAD------------------KIFPSTLD----------- 252
A S +W+ LR W K+ STL+
Sbjct: 519 AVKGS---DGFWVGKSSLRSWRQLALEQLDEQDGDAEQSNGKMNGSTLNKDESKEERKEE 575
Query: 253 -----NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI--- 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 576 EELNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILER 634
Query: 304 -----DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW--- 349
+ H ++ +++ SL L D LS + + Y VS+ ++++W
Sbjct: 635 EGEENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKF 690
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYE 399
R+ +P + G +++ CPHG LM A K L+ P I LF+ +
Sbjct: 691 VRKPTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVD 748
Query: 400 DAMKVKPDDLLGC----STFPLDSEECPECSDAL 429
+K+ ++ + + + + CPEC + L
Sbjct: 749 HVIKITRIEVGDVNPSETQYISEPKLCPECREGL 782
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 867 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 926
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 927 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 966
>gi|338722135|ref|XP_001504346.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 1
[Equus caballus]
Length = 970
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 207/512 (40%), Gaps = 120/512 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + + +N + E +EM
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVERDNSKFEEWCIEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ D H +++KEL + G C++ + + R L ++ ++ +++ + V
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKV 518
Query: 225 PSLEEPFYWISSDWLRQW--------------AD----KIFPSTLD-------------- 252
+W+ LR W AD K+ STL+
Sbjct: 519 TVKGNDGFWVGKSSLRSWRQLALEQLDEQDGDADQSNGKMNGSTLNKDESKEERKEEEEE 578
Query: 253 ---NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI----- 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 579 LNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREG 637
Query: 304 ---DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW---TR 351
+ H ++ +++ SL L D LS + + Y VS+ ++++W R
Sbjct: 638 EENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVR 693
Query: 352 RKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYEDA 401
+ +P A G ++ CPHG LM A K L+ P I LF+ +
Sbjct: 694 KPARCSPVSAVG--NHALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVDHV 751
Query: 402 MKVKPDDLLGC----STFPLDSEECPECSDAL 429
+K+ ++ + + + + CPEC + L
Sbjct: 752 IKITRTEVGDANPSEAQYISEPKLCPECREGL 783
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 868 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 927
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 928 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 967
>gi|397485748|ref|XP_003814002.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2 [Pan
paniscus]
Length = 969
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 205/511 (40%), Gaps = 119/511 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + D +N + E +EM
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ D H +++KEL + G C++ + + R L ++ ++ +++ +
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRILRLKNQLNEDYKTVNNLLKA 518
Query: 225 PSLEEPFYWISSDWLRQWAD------------------KIFPSTLD-------------- 252
+W+ LR W K+ STL+
Sbjct: 519 AVKGNDGFWVGKSSLRSWRQLALEQLDEQDGDAEQSNGKMNGSTLNKDESKEERKEEEEL 578
Query: 253 --NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI------ 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 579 NFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREGE 637
Query: 304 --DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW---TRR 352
+ H ++ +++ SL L D LS + + Y VS+ ++++W R+
Sbjct: 638 ENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVRK 693
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYEDAM 402
+P + G +++ CPHG LM A K L+ P I LF+ + +
Sbjct: 694 PTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQVIQKLFVVDHVI 751
Query: 403 KVKPDDLLGC----STFPLDSEECPECSDAL 429
K+ ++ + + + + CPEC + L
Sbjct: 752 KITRIEMGDVNPSETQYISEPKLCPECREGL 782
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 867 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 926
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 927 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 966
>gi|432884788|ref|XP_004074587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Oryzias
latipes]
Length = 926
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 41/310 (13%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI+S FP E L+M+ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 612 KISSHVSFPLEGLDMRPFLAKESPSQVT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 669
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGAN--ENHVDVHLPSS 118
W+EFDD++V+ + H + + + +S + + V AN E + S
Sbjct: 670 WYEFDDQYVTEV-HETVVQNAEAYVLFYRKSSDEAVRERQKVVALANMKEPSLLQFYISR 728
Query: 119 EYYNGSNV---ERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFL 175
E+ N N SN ++ + R +K H ++++ + ++ N +L
Sbjct: 729 EWLNKFNTFAEPGPISNQTFLCQH---RGIPPNK----YHYIDDLVV---IVPQNVWEYL 778
Query: 176 PSHLGKDIKELNRSYLDGCEQFKL-----RKNRELDCISERKQEVRSLLSEAPVPSLEEP 230
+ G +N Y+ G Q ++ R+ E+D + +E ++ EAP L
Sbjct: 779 YNSFGGG-PAVNHLYICGICQVEIETLAKRRKTEIDTFIKLNKEFQA--EEAPTVIL--- 832
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGS-MKRISSKAWNKFF 283
IS W R+W D P +DN+ I + G + K G+ +IS + W
Sbjct: 833 --CISMQWFREWESFVKGKDNEPPGPIDNSKICVMKGGHIQLKQGADYGQISEETWQYLL 890
Query: 284 FKYNGGPALT 293
Y GGP +
Sbjct: 891 GIYGGGPEIA 900
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + D +Q+V +L + PSL + ++IS +WL ++
Sbjct: 678 VTEVHETVVQNAEAYVLFYRKSSDEAVRERQKVVAL-ANMKEPSLLQ--FYISREWLNKF 734
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N + C H +P +K + + W + + GGPA+ + C
Sbjct: 735 NTFAEPGPISNQTFLCQHRGIPPNKYHYIDDLVVIVPQNVWEYLYNSFGGGPAVNHLYIC 794
Query: 299 MTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
C ++ ++ RRK + L + + + +S W ++W +
Sbjct: 795 GICQVE-------IETLAKRRKTEIDTFIKLNKEFQAEEAPTVILCISMQWFREWESFVK 847
Query: 352 RKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
K+ + P D ++ H QL GA + E W ++
Sbjct: 848 GKDNEPPGPIDNSKICVMKGGHIQL----KQGADYGQISEETWQYL 889
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVE---GTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + V E T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRVKKAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 686 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 734
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ +D+V
Sbjct: 735 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVL---------- 784
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E V+ +
Sbjct: 785 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRVKKAFQKED 842
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 843 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISE 899
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 900 ETWNFLQSIYGGGPEV 915
>gi|345327617|ref|XP_001506516.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ornithorhynchus anatinus]
Length = 292
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 26/251 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ V +LL+ PSL + ++IS WL
Sbjct: 42 QSVTEVSESTVQNAEAYVLFYRKSSEDAQKERRRVSNLLNMME-PSLLQ--FYISRQWLN 98
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 99 KFKTFAEPGPISNNDFLCVHGGVPPCKAGYIEDLVVMLPQNIWDNLYSRYGGGPAVNHLY 158
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQW--- 349
C TC I+ + RRK+ + + E + Y +S W ++W
Sbjct: 159 VCHTCQIE-------VEKIEKRRKTELEMFIRLNRAFQEEESPAIFYCISMQWFREWEGF 211
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
+ K+ D P D + +C G ++ ++ GA + E W F+ + P+ +
Sbjct: 212 VKGKDGDPPGPIDNSKIAATKC--GSVVLKQ--GADSGQISEETWNFL-QSIYGGGPEVI 266
Query: 410 LGCSTFPLDSE 420
L PL+SE
Sbjct: 267 LRPPVAPLESE 277
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVE---GTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + V E T+Y +S W ++W
Sbjct: 778 ICHTCQIE-------AEKIEKRRKTELEIFIRVKKAFQKEDSPATFYCISMQWFREWESF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 831 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 874
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 655 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 703
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ +D+V
Sbjct: 704 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVL---------- 753
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E V+ +
Sbjct: 754 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRVKKAFQKED 811
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 812 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISE 868
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 869 ETWNFLQSIYGGGPEV 884
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 47/314 (14%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 598 KINSHVSFPLEGLDLKPFLAKESPSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 655
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+EFDD++V+ + + V +E V E E V L +
Sbjct: 656 WYEFDDQYVTEVHE-----------TVVQNAEAYVLFYRKSSEESVRERQRVVALAN--- 701
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD--IFLPSH 178
++ +F + ++ +N + + I + DD + LP +
Sbjct: 702 LKEPSLLQFYISREWLNKFNTFTEPGPITNHTFLCQHGGTRIPPTKYHYVDDLVVILPQN 761
Query: 179 LGKDI-------KELNRSYLDGCEQFKL-----RKNRELDCISERKQEVRSLLSEAPVPS 226
+ + + +N Y+ Q ++ R+ E+D + +E ++ EAP
Sbjct: 762 VWEYLYNRFGGGPAVNHLYVCAICQVEIETLAKRRKLEIDTFIKLNKEFQA--EEAPTVI 819
Query: 227 LEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGS-MKRISSKAW 279
L IS W R+W D P +DN+ I + G + K G+ +IS + W
Sbjct: 820 L-----CISMQWFREWENFVKGKDNEPPGPIDNSKIAVMKGGHIQLKQGADYGQISEETW 874
Query: 280 NKFFFKYNGGPALT 293
Y GGP +
Sbjct: 875 QYLLSIYGGGPEIA 888
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 664 VTEVHETVVQNAEAYVLFYRKSSE-ESVRERQRVVA--LANLKEPSLLQ--FYISREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHG--KVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTN 294
++ P + N + C HG ++P +K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFTEPGPITNHTFLCQHGGTRIPPTKYHYVDDLVVILPQNVWEYLYNRFGGGPAVNH 778
Query: 295 DDYCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 779 LYVCAICQVE-------IETLAKRRKLEIDTFIKLNKEFQAEEAPTVILCISMQWFREWE 831
Query: 350 --TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ H QL GA + E W ++
Sbjct: 832 NFVKGKDNEPPGPIDNSKIAVMKGGHIQL----KQGADYGQISEETWQYL 877
>gi|405122445|gb|AFR97212.1| ubiquitin specific peptidase 48 [Cryptococcus neoformans var.
grubii H99]
Length = 1002
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 151/698 (21%), Positives = 247/698 (35%), Gaps = 163/698 (23%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L V+ H+GT+ GH+I DEN W+ +DE V P K
Sbjct: 340 VYELRGVISHQGTSAYHGHFICETYDENNDIWYICNDELVQPKPARPH--------KKAK 391
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSK 149
+P G +++ ++ S DAYML+Y RRD
Sbjct: 392 LDKP-----------GDDKDKIE-----------------WSKDAYMLVYK-RRDGRVPP 422
Query: 150 RKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCIS 209
+ P+ + + +KE NR + + ++RK D
Sbjct: 423 QPP-----------------------PAIVMEKVKEENRGLREELNKVEVRKEVLEDEWE 459
Query: 210 ERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWAD----KIFPSTLDNTSIQCLHGKVPE 265
K ++ P E Y I + L +W + + D +SI C H +V
Sbjct: 460 HLKGAKMDVIRALPGACTE---YIIPREALAKWIQSPSFQDLYTPFDYSSILCAHSQVDP 516
Query: 266 SKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGL 325
K + IS+ A +K Y P + D C C+ +G V S +R+ +L+
Sbjct: 517 LKSSDTRTISALAHDKLS-SYTSLPEI---DVCTICVAEG---FVERLSITERQSTLETF 569
Query: 326 ADDVLSGKLVE----GTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKA 381
+ +L E + + K+WL W R P P+ ++ CPH +P +
Sbjct: 570 DELNAQAELEEVDEGERWCLPKTWLVHW--RTGKLPPQTLPTHPSYTLLCPHIAPLPPSS 627
Query: 382 GGAKRLLVPEILWLFIYEDAMKVKPDDLLGC-STFPLDSEECPECS-----DALSEVACL 435
L+ L L + G +F + CPECS DA S
Sbjct: 628 APPVTLITSSALSLL----------HSIFGSFPSFQPGTPPCPECSFGADQDAESLAQWK 677
Query: 436 EDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYI-SPSGKNASSIEP 494
D + +K + A G YY+LP ++ KW Y+ +P G+ +P
Sbjct: 678 TDVKLDKSIKRHLDPRPPAFGMD--------YYVLPKEFIEKWEVYMKTPGGE-----KP 724
Query: 495 EILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWGGI 554
E LD + +CE +L+ P + R ++ E W C+++G
Sbjct: 725 E-LDMGLGRGRCEHG--MLDWDPQMEKTR--------------VINEIGWGMLCQKYG-- 765
Query: 555 KEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTF-PEICED 613
+ + V F N E ++ + +F P +CE
Sbjct: 766 --EKEPIKVQFGANPP---------------------------EGKKVNISSFTPGVCEP 796
Query: 614 CIGERESC--ELMQKLNYCDKD-ISVFLVRGKEAPRSILEASESMFEPDRRASKRSRKTR 670
C R S EL + + IS FL A S+ E R AS+ R
Sbjct: 797 CRIARLSSYDELEIPIVFAPTPLISSFLSYSIPASTGNTSGSKLGSEASRNASRALRSRL 856
Query: 671 SFVNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQ 707
+ ++ + ++I LK+ I G+ Q I +K Q
Sbjct: 857 KTLYVQATRQSTIKDLKLSILSETGITPLLQKIYYKSQ 894
>gi|297666133|ref|XP_002811387.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2
[Pongo abelii]
Length = 842
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 205/511 (40%), Gaps = 119/511 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 181 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 239
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 240 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 282
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + D +N + E +EM
Sbjct: 283 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQ 333
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ D H +++KEL + G C++ + + R L ++ ++ +++ +
Sbjct: 334 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRILRLKNQLNEDYKTVNNLLKA 391
Query: 225 PSLEEPFYWISSDWLRQWAD------------------KIFPSTLD-------------- 252
+W+ LR W K+ STL+
Sbjct: 392 AVKGNDGFWVGKSSLRSWRQLALEQLDEQDGDAEQSNGKMNGSTLNKDESKEERKEEEEL 451
Query: 253 --NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI------ 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 452 NFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREGE 510
Query: 304 --DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW---TRR 352
+ H ++ +++ SL L D LS + + Y VS+ ++++W R+
Sbjct: 511 ENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVRK 566
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYEDAM 402
+P + G +++ CPHG LM A K L+ P I LF+ + +
Sbjct: 567 PTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVDHVI 624
Query: 403 KVKPDDLLGC----STFPLDSEECPECSDAL 429
K+ ++ + + + + CPEC + L
Sbjct: 625 KITRIEVGDVNPSETQYISEPKLCPECREGL 655
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 740 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 799
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 800 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 839
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 25/228 (10%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ ++ CE + L + D + +Q+ L+ A L+ ++IS W+ +
Sbjct: 583 VTEVDLQQVENCEAYVLFYRSKNDLMVPVRQKAEQYLNGAENSFLK---FYISKQWINMF 639
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSM----KRISSKAWNKFFFKYNGGPALTNDDYC 298
P + N C+HG V K + + K W KY GGPA+T C
Sbjct: 640 NTFAEPGPICNQDFACVHGGVHPYKWAQVDDLVTEVPQKLWEFLSEKYGGGPAITRLYQC 699
Query: 299 MTCLIDGAHTVVCADSYRDRRKS----LKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
TC + + R R+++ L ++ E Y +S SW +QW R
Sbjct: 700 STCQAE-------LEKLRKRQQTEMDNFLHLQEEFDRHDCPEAVYAISLSWFKQWETFVR 752
Query: 352 RKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYE 399
RK D P D + R H L + G + + +W F+++
Sbjct: 753 RKTDDPPGPIDNSKISITRNNHVHLRTKSEYGQ----ISDDMWFFLHD 796
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 118/312 (37%), Gaps = 47/312 (15%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+M L + + + YDL AV+ H GTA GHY + + + QW
Sbjct: 517 KINSYVSFPLENLDMGPYLHKDCENQVTTYDLVAVICHHGTA-GGGHYTSYALNHLSQQW 575
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+EFDD++V ++V + C+ N+ V V + +Y
Sbjct: 576 YEFDDQYV----------------TEVDLQQVENCEAYVLFYRSKNDLMVPVRQKAEQYL 619
Query: 122 NGS--NVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIESEMIFFNDDI 173
NG+ + +F + ++ M+N + +D VH +++ + +
Sbjct: 620 NGAENSFLKFYISKQWINMFNTFAEPGPICNQDFACVHGGVHPYKWAQVDDLVTEVPQKL 679
Query: 174 --FLPSHLGKD--IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEE 229
FL G I L + E KLRK ++ + L E E
Sbjct: 680 WEFLSEKYGGGPAITRLYQCSTCQAELEKLRKRQQTE-----MDNFLHLQEEFDRHDCPE 734
Query: 230 PFYWISSDWLRQWADKIF------PSTLDNTSIQCLHGKVPESKIGS-MKRISSKAWNKF 282
Y IS W +QW + P +DN+ I + S +IS W F
Sbjct: 735 AVYAISLSWFKQWETFVRRKTDDPPGPIDNSKISITRNNHVHLRTKSEYGQISDDMW--F 792
Query: 283 FFK--YNGGPAL 292
F Y GGP +
Sbjct: 793 FLHDIYGGGPEI 804
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
>gi|345793714|ref|XP_866736.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48 isoform 2
[Canis lupus familiaris]
Length = 970
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 204/512 (39%), Gaps = 120/512 (23%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDV------VHDVNNMEIE------SEMIFF 169
S +AYML+Y L+ ++ + V + D +N + E +EM
Sbjct: 410 ---------SRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQ 460
Query: 170 NDDIFLPSHLGKDIKELNRSYLDG-----CEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ D H +++KEL + G C++ + + R L S+ ++ +++ +
Sbjct: 461 SVDKGKAKH--EEVKELYQRLPAGAVKALCKECVVERCRVLRLKSQLNEDYKTVNNLLKA 518
Query: 225 PSLEEPFYWISSDWLRQWAD------------------KIFPSTLD-------------- 252
+W+ LR W K+ +TL
Sbjct: 519 TVKGNDGFWVGKSSLRSWRQLALEQLDEQDGDVDQSNGKMNGNTLSKDESKEERKEEEEE 578
Query: 253 ---NTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPAL-TNDDYCMTCLI----- 303
N I C HG++ S+ + +S +AW+K + P + + C C I
Sbjct: 579 LNFNEDILCPHGELCISE-NERRLVSKEAWSKLQQYFPKAPEFPSYRECCSQCKILEREG 637
Query: 304 ---DGAHTVVCADSYRDRRKSLKGLADD----VLSG--KLVEGTYYVSKSWLQQW---TR 351
+ H ++ +++ SL L D LS + + Y VS+ ++++W R
Sbjct: 638 EENEALHKMIA----NEQKTSLPNLFQDKNRPCLSNWPEETDVLYIVSQFFVEEWRKFVR 693
Query: 352 RKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKR------LLVPE----ILWLFIYEDA 401
+ +P + G +++ CPHG LM A K L+ P I LF+ +
Sbjct: 694 KPTRCSPVSSVG--NSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVDHV 751
Query: 402 MKVKPDDLLGC----STFPLDSEECPECSDAL 429
+K+ ++ + + + + CPEC + L
Sbjct: 752 IKIIRTEVGDVNPSETQYISEPKLCPECREGL 783
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 868 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 927
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 928 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 967
>gi|83583659|gb|ABC24689.1| ubiquitin-specific peptidase 48 [Salmo salar]
Length = 151
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + FP +L+M L E +Y+LSAVLIH+G + SGHYIA ++D T W
Sbjct: 24 KKKLNTFISFPEQLDMGPFL-EGKDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTSDW 82
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSE 92
++F+DE + + G ++ V+S+
Sbjct: 83 YKFNDEDIEKMEGKKLQLGIEEDIAETVKSQ 113
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 778 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 831 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 874
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 778 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 831 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 874
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 778 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 831 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 874
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|4884351|emb|CAB43288.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 26 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 82
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 83 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 142
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 143 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 195
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 196 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 239
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 730 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 786
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 787 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 846
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 847 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 899
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 900 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 943
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 666 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 723
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 724 WYEFDDQSVTEV 735
>gi|301773886|ref|XP_002922367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ailuropoda melanoleuca]
Length = 932
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 682 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 738
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 739 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 798
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 799 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 851
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 852 VKGKDGDPPGPIDNTKIAVTKC--GSVMLRQ--GADSGQISEETWNFL 895
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S + ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 618 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 676
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 677 YEFDDQSVTEV 687
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 785 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 841
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 842 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 901
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 902 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 954
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 955 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 998
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 721 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 778
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 779 WYEFDDQSVTEV 790
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 792 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 848
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 849 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 908
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 909 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 961
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 962 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 1005
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S + ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 728 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 786
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 787 YEFDDQSVTEV 797
>gi|281349070|gb|EFB24654.1| hypothetical protein PANDA_011320 [Ailuropoda melanoleuca]
Length = 929
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 679 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 735
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 736 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 795
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 796 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 848
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 849 VKGKDGDPPGPIDNTKIAVTKC--GSVMLRQ--GADSGQISEETWNFL 892
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S + ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 615 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 673
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 674 YEFDDQSVTEV 684
>gi|60360262|dbj|BAD90375.1| mKIAA4202 protein [Mus musculus]
Length = 520
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 344 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 402
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 403 YKFNDEDIEKM 413
>gi|74141705|dbj|BAE38603.1| unnamed protein product [Mus musculus]
Length = 485
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 367 YKFNDEDIEKM 377
>gi|148670666|gb|EDL02613.1| mCG17174, isoform CRA_b [Mus musculus]
Length = 263
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 181 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 239
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 240 YKFNDEDIEKM 250
>gi|148670665|gb|EDL02612.1| mCG17174, isoform CRA_a [Mus musculus]
Length = 259
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 177 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 235
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 236 YKFNDEDIEKM 246
>gi|449683051|ref|XP_002154983.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Hydra
magnipapillata]
Length = 436
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI + FP ++M + + + D +Y LS+VLIH+G + +SGHYIA I DE W
Sbjct: 296 KKKINTALNFPETIDMGKYIKFDNPEDGLYHLSSVLIHRGLSAHSGHYIAHIYDEENNIW 355
Query: 62 WEFDDEHVS 70
F+DE V+
Sbjct: 356 CRFNDEEVT 364
>gi|118094484|ref|XP_422389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Gallus gallus]
Length = 910
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + ++ + SLL+ PSL + +++S WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSNEEAQRERRRISSLLNMME-PSLLQ--FYVSRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCMHGGVPPHKASFIEDLVVMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVE---GTYY-VSKSWLQQW--- 349
C TC I+ ++ RRK+ + + E T+Y +S W ++W
Sbjct: 777 VCHTCQIE-------SERLEKRRKNELEMFIRLYRAFQEEESPSTFYCISMQWFREWEEF 829
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D G +C + L GA + E W F+
Sbjct: 830 VKGKDSDPPGPIDNGKIAITKCGNAVL----KQGADSGQISEETWNFL 873
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEV 665
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 679 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 735
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 736 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 795
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 796 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 848
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 849 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 892
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 615 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 672
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 673 WYEFDDQSVTEV 684
>gi|426215772|ref|XP_004002143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Ovis aries]
Length = 912
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 662 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 719 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 779 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 831
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 832 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 875
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 598 KISTHVSFPLEGLDLQPFLAKDSPAQIVNYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 656
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 657 YEFDDQSVTEV 667
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 97/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ L+ ++IS WL
Sbjct: 681 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMESSLLQ---FYISRQWLN 737
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 738 KFKTFAEPGPISNNDFLCIHGGVPLRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 797
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 798 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 850
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 851 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 894
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 617 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNH 674
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 675 WYEFDDQSVTEV 686
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 778 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 831 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 874
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|155372005|ref|NP_001094609.1| ubiquitin carboxyl-terminal hydrolase 33 [Bos taurus]
gi|281312480|sp|A6QNM7.1|UBP33_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|151556801|gb|AAI48906.1| USP33 protein [Bos taurus]
gi|296489213|tpg|DAA31326.1| TPA: ubiquitin specific protease 33 [Bos taurus]
Length = 912
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 662 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 719 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 779 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 831
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 832 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 875
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S + ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 598 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 656
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 657 YEFDDQSVTEV 667
>gi|18257332|gb|AAH21769.1| Usp48 protein [Mus musculus]
Length = 383
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHV 69
++F+DE +
Sbjct: 367 YKFNDEDI 374
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 657 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 713
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 714 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 773
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 774 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 826
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 827 VKGKDGDPPGPIDNTKIAVTKC--GSVILRQ--GADSGQISEETWNFL 870
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 593 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 650
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 651 WYEFDDQSVTEV 662
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 685 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 741
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N CLHG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 742 KFKTFAEPGPISNNDFLCLHGGIPPRKANYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 801
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 802 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 854
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 855 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 898
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 621 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 678
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 679 WYEFDDQSVTEV 690
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 677 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 733
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N CLHG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 734 KFKTFAEPGPISNNDFLCLHGGIPPRKANYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 793
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 794 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 846
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 847 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 890
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 613 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 670
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 671 WYEFDDQSVTEV 682
>gi|444727561|gb|ELW68047.1| Ubiquitin carboxyl-terminal hydrolase 33 [Tupaia chinensis]
Length = 777
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 527 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 583
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 584 KFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 643
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 644 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 696
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 697 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWSFL 740
>gi|320164058|gb|EFW40957.1| ubiquitin carboxyl-terminal hydrolase 5 [Capsaspora owczarzaki ATCC
30864]
Length = 1135
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F FP +L++++ L+ P Y L +VL+H G VN GHY+A IK + G++++
Sbjct: 442 KINDQFEFPEKLDLEKYLAAPEDTPAHYTLHSVLVHSGD-VNGGHYVAFIKSQRDGKFYK 500
Query: 64 FDDEHVS 70
FDD+ VS
Sbjct: 501 FDDDRVS 507
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 751 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 807
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 808 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 867
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 868 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 920
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 921 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 964
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 687 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 744
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 745 WYEFDDQSVTEV 756
>gi|47219848|emb|CAF97118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI+S FP E LNMQ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 606 KISSHVSFPLEGLNMQPFLAKDSPSQVT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 663
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 664 WYEFDDQYVTEV 675
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 15/225 (6%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYY-VSKSWLQQW---TRR 352
C TC I+ + R + + + T+Y +S W ++W +
Sbjct: 777 ICHTCQIEAEEIEKKKKNRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKG 836
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
K+ D P D +C G +M + GA + E W F+
Sbjct: 837 KDGDPPGPIDNTKIAVTKC--GSVMLRQ--GADSGQISEETWNFL 877
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEV 665
>gi|402225122|gb|EJU05183.1| hypothetical protein DACRYDRAFT_103677 [Dacryopinax sp. DJM-731
SS1]
Length = 1352
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLD-LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+KK FP LNM+ L+ + +D IYDL VL+H+G + GHYIA D + GQ
Sbjct: 378 RKKSKQVIQFPLSLNMKPFLNGGAYMDDQIYDLRGVLLHRGLSAYHGHYIAQAYDVSKGQ 437
Query: 61 WWEFDDEHVSNL 72
W++F+DE VS L
Sbjct: 438 WFQFNDEEVSPL 449
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 135/587 (22%), Positives = 221/587 (37%), Gaps = 96/587 (16%)
Query: 216 RSLLSEAPV--PSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHGK-VPESKIGSMK 272
++L+S PV P++ + ++WL+ TL + S+ C HG VP + S+K
Sbjct: 739 KTLVSSPPVANPAV------LQTNWLQ--------GTLTSDSL-CEHGLIVPPAT--SLK 781
Query: 273 RISSKAWNKFF-FKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSL-KGLADDVL 330
RI+ A+ + PAL + C C VV Y R L K D +
Sbjct: 782 RINQAAYMRLLSLGVIFEPALAHTAVCPDC----TEHVVSERIYGIRHPELVKVFQDQNI 837
Query: 331 SGKLVEGTYYVSKSWLQQW-TRRKNLDAPSEADGGPTT-----SIRCPHGQLMPEKAGGA 384
+ Y+VSK WL+ W + R + A + D P + C H L K
Sbjct: 838 IHSPEDVAYWVSKQWLKDWLSSRPKMHAYGQLDPPPNAEPWKNDLVCEHEGL---KISEK 894
Query: 385 KRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRARKL 444
R LV + + + P G TF E C C +A + R
Sbjct: 895 DRKLVSAQAYRLL----RTIYP----GWETFSNTVEVCVVCQEAEDLTSDARADARKAAD 946
Query: 445 KERQN-HEKLALG--KSIPLSL--DCKYYLLPSTWLTKWRNYISPSGKNASSIEPEILDG 499
+ER L++ S P+SL Y ++PS ++ WR+++ N+ P LD
Sbjct: 947 RERSRLRSMLSINPLASRPVSLIEGFVYAVVPSAFIRAWRSWLIHPLTNS---RPTSLDT 1003
Query: 500 VIDSLKCEKHLRLLERPPDLVCKRGSIY-QKGSATD----GLTIVTENDWKWFCEEWGGI 554
I C IY A D L ++ E++W + +
Sbjct: 1004 SI-----------------FFCPHEKIYFDSNEAVDMEDVDLVVIKESEWNILAQLYPAG 1046
Query: 555 KEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIESQRPVVRTFPEICEDC 614
+ L N V C + + + C R E + E + PV F +I +
Sbjct: 1047 QMIRLEPTTHIDENETVRNVVICNQEVCQQ--C--RRERKSSFE-EAPVTMYFMDITDPL 1101
Query: 615 -IGERESCELMQKLNYCDKD----ISVFLVRGKEAP---RSILEA----SESMFEPDRRA 662
IG + E + + D +SV GK +P S L+A + ++ R
Sbjct: 1102 PIGNTPNSEQPNAPSASNADDLDIVSVSAQTGKSSPVKSESTLDAYVYGTSGNYDGGLRK 1161
Query: 663 SKRSRKTRSF---VNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLA 718
SKR R T+ + + ++ +K+ +++ + Q + H G+ I D T+A
Sbjct: 1162 SKRLRATKQRGMNRTIIIRKGDTVKDIKVELFDQFNIPTIYQRLFHAGREITDWSDKTVA 1221
Query: 719 DLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
D+ I D + V + + + D DE K + F GTLL+
Sbjct: 1222 DIGILAQDTISVLEVKPVDEDD--DEGGRPKKKRREEGPAFGGTLLS 1266
>gi|290994100|ref|XP_002679670.1| peptidase C19 family ubiquitinyl hydrolase [Naegleria gruberi]
gi|284093288|gb|EFC46926.1| peptidase C19 family ubiquitinyl hydrolase [Naegleria gruberi]
Length = 1139
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ + FP EL++ + L + +Q + IY+L VL+H GT+ + GHY A IK ++ +W+
Sbjct: 322 KLGNMVTFPFELDVSKYLEDNTQ-NAIYELFGVLVHSGTS-SGGHYYAYIKSFSSDKWYN 379
Query: 64 FDDEHVSNLGHHP----FGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHL 115
F+D +VS + FG SSS + S +R E N N VD+ +
Sbjct: 380 FNDSNVSEIDREQVKVMFGNNDSSSTGRFASSTNAYMLLYRKRDEKLNINSVDMSI 435
>gi|349603493|gb|AEP99316.1| Ubiquitin carboxyl-terminal hydrolase 48-like protein, partial
[Equus caballus]
Length = 418
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 243 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 301
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 302 YKFNDEDIEKM 312
>gi|194211186|ref|XP_001498483.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Equus
caballus]
Length = 961
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 711 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 767
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 768 KFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 827
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 828 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 880
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 881 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 924
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 647 KINTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 704
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 705 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 753
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 754 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVL---------- 803
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 804 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRLNRAFQEED 861
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 862 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISE 918
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 919 ETWNFLQSIYGGGPEV 934
>gi|296490080|tpg|DAA32193.1| TPA: ubiquitin specific peptidase 48-like [Bos taurus]
Length = 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 367 YKFNDEDIEKM 377
>gi|380817114|gb|AFE80431.1| ubiquitin carboxyl-terminal hydrolase 48 isoform b [Macaca mulatta]
gi|383422131|gb|AFH34279.1| ubiquitin carboxyl-terminal hydrolase 48 isoform b [Macaca mulatta]
gi|384940272|gb|AFI33741.1| ubiquitin carboxyl-terminal hydrolase 48 isoform b [Macaca mulatta]
Length = 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 367 YKFNDEDIEKM 377
>gi|417411324|gb|JAA52102.1| Putative ubiquitin carboxyl-terminal hydrolase 48, partial
[Desmodus rotundus]
Length = 513
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 336 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 394
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 395 YKFNDEDIEKM 405
>gi|76257392|ref|NP_001027902.1| ubiquitin carboxyl-terminal hydrolase 48 isoform b [Homo sapiens]
gi|441671285|ref|XP_004092255.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Nomascus
leucogenys]
gi|410208634|gb|JAA01536.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410257288|gb|JAA16611.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410294074|gb|JAA25637.1| ubiquitin specific peptidase 48 [Pan troglodytes]
gi|410342859|gb|JAA40376.1| ubiquitin specific peptidase 48 [Pan troglodytes]
Length = 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNL 72
++F+DE + +
Sbjct: 367 YKFNDEDIEKM 377
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|303289236|ref|XP_003063906.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454974|gb|EEH52279.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 284
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 16/87 (18%)
Query: 2 KKKITSPFCFPGELNMQR------------RLSEPSQLDLIYDLSAVLIHKGTAVNSGHY 49
+KK+T F FP +++ R + ++ YDL+ +L+H+G SGHY
Sbjct: 197 RKKVTDAFEFPSSVDLSEFVSPLEGDRGGGRADDDARATYEYDLAFILVHRGQNATSGHY 256
Query: 50 IALIKDENTGQ----WWEFDDEHVSNL 72
+AL+KD N WW FDD+ V L
Sbjct: 257 VALVKDTNDASRDATWWRFDDDEVDEL 283
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|62859025|ref|NP_001016228.1| ubiquitin carboxyl-terminal hydrolase 33 [Xenopus (Silurana)
tropicalis]
gi|123892401|sp|Q28CN3.1|UBP33_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|89268163|emb|CAJ82183.1| ubiquitin specific protease 33 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ + + E + L + + + ++ V LL+ PSL + ++IS WL
Sbjct: 642 QSVTEVSEATVQNAEAYVLFYRKASEEAQKERRRVSCLLNIME-PSLLQ--FYISRQWLN 698
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 699 KFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLVVMLPQNIWDYLYSRYGGGPAVNHLY 758
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C TC + + RRK + L + Y +S W ++W
Sbjct: 759 VCYTCQTE-------MEKIEKRRKMELETFIRLNKAFQEEESPAVIYCISMQWFREWEGF 811
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D + +C H L GA + E WLF+
Sbjct: 812 VKSKDSDPPGPIDNTKIAAAKCGHITLRQ----GADSGQISEETWLFL 855
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 71/325 (21%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ PSQ+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 578 KIGTHVSFPLEGLDLQPFLAKDSPSQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 635
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENH-----VDVHL 115
W+EFDD+ V+ + S + V +E V E E +++
Sbjct: 636 WYEFDDQSVTEV-----------SEATVQNAEAYVLFYRKASEEAQKERRRVSCLLNIME 684
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 685 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLV----------- 733
Query: 166 MIFFNDDIFLPSHL----------GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEV 215
+ LP ++ G + L Y E K+ K R+++ E +
Sbjct: 734 -------VMLPQNIWDYLYSRYGGGPAVNHLYVCYTCQTEMEKIEKRRKMEL--ETFIRL 784
Query: 216 RSLLSEAPVPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKI 268
E P++ Y IS W R+W D P +DNT I G + +
Sbjct: 785 NKAFQEEESPAV---IYCISMQWFREWEGFVKSKDSDPPGPIDNTKIAAAKCGHITLRQG 841
Query: 269 GSMKRISSKAWNKFFFKYNGGPALT 293
+IS + W Y GGP +T
Sbjct: 842 ADSGQISEETWLFLQSIYGGGPEIT 866
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 401 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 459
Query: 64 FDDEHVS 70
DD VS
Sbjct: 460 MDDAKVS 466
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|410903724|ref|XP_003965343.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Takifugu
rubripes]
Length = 937
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E LNMQ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 623 KIGSHVSFPLEGLNMQPFLAKDSPSQVT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 680
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 681 WYEFDDQYVTEV 692
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 689 VTEVHETVVQNAEAYVLFYRKSSE-ESVRERQKVVA--LASMKEPSLLQ--FYISREWLN 743
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 744 KFNTFAEPGPISNHTFLCQHGGIPPNKYQYIDDLVVIVPQNVWEYLYNRFGGGPAVNHLY 803
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 804 MCAICQVE-------IEALAKRRKMEIDTFIKLNKEFQAEEAPTVILCISMQWFREWESF 856
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ H QL GA + E W ++
Sbjct: 857 VKGKDNEPPGPVDNSKIGVMKGGHIQL----KQGADYGQISEETWQYL 900
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + +++ S + E + L + + + ++ + +LL+ PSL + +++S WL
Sbjct: 875 QSVTQVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYVSRQWLN 931
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 932 KFKTFAEPGPISNNDFLCVHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 991
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 992 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 1044
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 1045 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 1088
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 129/313 (41%), Gaps = 53/313 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 811 KISTHVSFPLEGLDLQPFLAKDSPTQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 869
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHLP 116
+EFDD+ V+ + S S V +E V E E N +++ P
Sbjct: 870 YEFDDQSVTQV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEP 918
Query: 117 S--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEM 166
S Y + + +F SN+ ++ ++ ++ +D+V M
Sbjct: 919 SLLQFYVSRQWLNKFKTFAEPGPISNNDFLCVHGGVPPRKAGYIEDLVL----------M 968
Query: 167 IFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 969 LPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRLNRAFQEEDS 1026
Query: 225 PSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSK 277
P+ FY IS W R+W D P +DNT I G V + +IS +
Sbjct: 1027 PAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEE 1083
Query: 278 AWNKFFFKYNGGP 290
WN Y GGP
Sbjct: 1084 TWNFLQSIYGGGP 1096
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 51/312 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 645 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQRERRRISNLLNIME 693
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 694 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 743
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 744 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRLNRAFQEED 801
Query: 224 VPSLEEPFYWISSDWLRQWAD--KIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWN 280
P+ FY IS W R+W K P +DNT I G V + +IS + WN
Sbjct: 802 SPAT---FYCISMQWFREWESFVKDPPGPIDNTKIAVTKCGNVMLKQGADSGQISEETWN 858
Query: 281 KFFFKYNGGPAL 292
Y GGP +
Sbjct: 859 FLQSIYGGGPEV 870
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + ++ + +LL+ PSL + ++IS WL
Sbjct: 651 QSVTEVSESTVQNAEAYVLFYRKSSEEAQRERRRISNLLNIME-PSLLQ--FYISRQWLN 707
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 708 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 767
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRR 352
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 768 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 820
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
D P D +C G +M ++ GA + E W F+
Sbjct: 821 VK-DPPGPIDNTKIAVTKC--GNVMLKQ--GADSGQISEETWNFL 860
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L++Q LSE L+Y L AVL+H G + +SGHY IK N GQW++
Sbjct: 291 KMTKEVQYPERLDLQHYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFIKAGN-GQWYK 349
Query: 64 FDDEHVSN 71
DD VS+
Sbjct: 350 MDDAKVSS 357
>gi|449275838|gb|EMC84595.1| Ubiquitin carboxyl-terminal hydrolase 33 [Columba livia]
Length = 911
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 19/225 (8%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ + + E + L + + ++ + LL+ PSL + +++S WL
Sbjct: 661 QSVTEVSETTVQNAEAYVLFYRKSSEEAQRERRRISGLLNMME-PSLLQ--FYVSRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCVHGGVPPHKANFIEDLVVMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYY-VSKSWLQQW---TRR 352
C TC I+ T + R + + + T+Y +S W ++W +
Sbjct: 778 VCHTCQIEAERT----EKRRKNELEMFIRLNRAFQEEESPSTFYCISMQWFREWEGFVKG 833
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
K+ D P D +C + L GA + E W F+
Sbjct: 834 KDSDPPGPIDNAKIAVTKCGNAVL----KQGADSGQISEETWNFL 874
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVQYPERLDMQHCLSEQRAGPLVYVLYAVLVHTGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGVPPRKANYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GNVLLRQ--GADSGQISEETWNFL 872
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 653 WYEFDDQSVTEV 664
>gi|213624427|gb|AAI71081.1| hypothetical protein LOC548982 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 29/230 (12%)
Query: 181 KDIKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDW 238
+ + E++ + + E + L RK E I R+ S L PSL + ++IS W
Sbjct: 642 QSVTEVSEATVQNAEAYVLFYRKASEEAQIERRR---VSCLLNIMEPSLLQ--FYISRQW 696
Query: 239 LRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTN 294
L ++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 697 LNKFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLVVMLPQNIWDYLYSRYGGGPAVNH 756
Query: 295 DDYCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW- 349
C TC + + RRK + L + Y +S W ++W
Sbjct: 757 LYVCYTCQTE-------MEKIEKRRKMELETFIRLNKAFQEEESPAVIYCISMQWFREWE 809
Query: 350 --TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D + +C H L GA + E WLF+
Sbjct: 810 GFVKSKDSDPPGPIDNTKIAAAKCGHITLRQ----GADSGQISEETWLFL 855
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 130/323 (40%), Gaps = 67/323 (20%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ PSQ+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 578 KIGTHVSFPLEGLDLQPFLAKDSPSQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 635
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVV---RSEPVVCQPVSERVEGANENHVDVHLPS 117
W+EFDD+ V+ + E + + V R Q RV +++ PS
Sbjct: 636 WYEFDDQSVTEV-----SEATVQNAEAYVLFYRKASEEAQIERRRVSCL----LNIMEPS 686
Query: 118 --SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMI 167
Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 687 LLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLV------------- 733
Query: 168 FFNDDIFLPSHL----------GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRS 217
+ LP ++ G + L Y E K+ K R+++ E +
Sbjct: 734 -----VMLPQNIWDYLYSRYGGGPAVNHLYVCYTCQTEMEKIEKRRKMEL--ETFIRLNK 786
Query: 218 LLSEAPVPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGS 270
E P++ Y IS W R+W D P +DNT I G + +
Sbjct: 787 AFQEEESPAV---IYCISMQWFREWEGFVKSKDSDPPGPIDNTKIAAAKCGHITLRQGAD 843
Query: 271 MKRISSKAWNKFFFKYNGGPALT 293
+IS + W Y GGP +T
Sbjct: 844 SGQISEETWLFLQSIYGGGPEIT 866
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 51/312 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 645 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 693
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 694 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 743
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 744 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 801
Query: 224 VPSLEEPFYWISSDWLRQWAD--KIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWN 280
P+ FY IS W R+W K P +DNT I G V + +IS + WN
Sbjct: 802 SPAT---FYCISMQWFREWESFVKDPPGPIDNTKIAVTKCGSVMLKQGADSGQISEETWN 858
Query: 281 KFFFKYNGGPAL 292
Y GGP +
Sbjct: 859 FLQSIYGGGPEV 870
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 651 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 707
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 708 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 767
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRR 352
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 768 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 820
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
D P D +C G +M ++ GA + E W F+
Sbjct: 821 VK-DPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 860
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 181 KDIKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPV--PSLEEPFYWISS 236
+ + E+ S + E + L RK+ E E K+E R LS V PSL + ++IS
Sbjct: 641 QSVTEVTESTVQNAEAYVLFYRKSNE-----EAKRE-RQKLSNLNVMEPSLLQ--FYISR 692
Query: 237 DWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPAL 292
WL ++ P + N C+HG VP K S++ + W+ + +Y GGPA+
Sbjct: 693 QWLNKYRTFAEPGPISNNDFLCIHGGVPPYKATSIEDLVVMLPQNIWDNLYSRYGGGPAV 752
Query: 293 TNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQ 348
+ C TC ++ A+ RRK+ + + E + Y +S W ++
Sbjct: 753 NHLYVCHTCQVE-------AEKIEKRRKTELEMFIRLNKAFQEEDSPSIFYCISMQWFRE 805
Query: 349 W---TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
W + K+ D P D +C G ++ ++ GA + E W F+
Sbjct: 806 WEGFVKAKDSDPPGPIDNAKIAVNKC--GNVVLKQ--GADSGQISEETWNFL 853
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 56/317 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ ++YDL +V+ H GTA+N GHYIA + +
Sbjct: 577 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VMYDLLSVICHHGTAIN-GHYIAYCWNNLNNR 634
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE----NHVDVHLP 116
W+EFDD+ V+ + + S V +E V E E ++++V P
Sbjct: 635 WYEFDDQSVTEV-----------TESTVQNAEAYVLFYRKSNEEAKRERQKLSNLNVMEP 683
Query: 117 S-----------SEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
S ++Y + ++ND + + K S VV N+
Sbjct: 684 SLLQFYISRQWLNKYRTFAEPGPISNNDFLCIHGGVPPYKATSIEDLVVMLPQNIW---- 739
Query: 166 MIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVP 225
D+++ G + L + E K+ K R+ + E + E P
Sbjct: 740 -----DNLYSRYGGGPAVNHLYVCHTCQVEAEKIEKRRKTEL--EMFIRLNKAFQEEDSP 792
Query: 226 SLEEPFYWISSDWLRQW------ADKIFPSTLDNTSI---QCLHGKVPESKIGSMKRISS 276
S+ FY IS W R+W D P +DN I +C G V + +IS
Sbjct: 793 SI---FYCISMQWFREWEGFVKAKDSDPPGPIDNAKIAVNKC--GNVVLKQGADSGQISE 847
Query: 277 KAWNKFFFKYNGGPALT 293
+ WN Y GGP +
Sbjct: 848 ETWNFLQSIYGGGPEIV 864
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M KI +P +LN+ S IYDL AVL+H G + NSGHY A K N GQ
Sbjct: 324 MGNKINRDITYPSKLNLGPYTSSDRNEGPIYDLYAVLVHSGFSCNSGHYYAYAKAAN-GQ 382
Query: 61 WWEFDDEHVSNLGHH 75
W+ F+D V+ + H
Sbjct: 383 WYCFNDSSVNQVSSH 397
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 51/312 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 645 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 693
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 694 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 743
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 744 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 801
Query: 224 VPSLEEPFYWISSDWLRQWAD--KIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWN 280
P+ FY IS W R+W K P +DNT I G V + +IS + WN
Sbjct: 802 SPAT---FYCISMQWFREWESFVKDPPGPIDNTKIAVTKCGSVMLKQGADSGQISEETWN 858
Query: 281 KFFFKYNGGPAL 292
Y GGP +
Sbjct: 859 FLQSIYGGGPEV 870
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 651 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 707
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 708 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 767
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRR 352
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 768 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 820
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
D P D +C G +M ++ GA + E W F+
Sbjct: 821 VK-DPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 860
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 181 KDIKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPV--PSLEEPFYWISS 236
+ + E+ S + E + L RK+ E E K+E R LS V PSL + ++IS
Sbjct: 648 QSVTEVTESTVQNAEAYVLFYRKSNE-----EAKRE-RQKLSNLNVMEPSLLQ--FYISR 699
Query: 237 DWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPAL 292
WL ++ P + N C+HG VP K S++ + W+ + +Y GGPA+
Sbjct: 700 QWLNKYRTFAEPGPISNNDFLCIHGGVPPYKATSIEDLVVMLPQNIWDNLYSRYGGGPAV 759
Query: 293 TNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQ 348
+ C TC ++ A+ RRK+ + + E + Y +S W ++
Sbjct: 760 NHLYVCHTCQVE-------AEKIEKRRKTELEMFIRLNKAFQEEDSPSIFYCISMQWFRE 812
Query: 349 W---TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
W + K+ D P D +C G ++ ++ GA + E W F+
Sbjct: 813 WEGFVKAKDSDPPGPIDNAKIAVNKC--GNVVLKQ--GADSGQISEETWNFL 860
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 56/317 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ ++YDL +V+ H GTA+N GHYIA + +
Sbjct: 584 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VMYDLLSVICHHGTAIN-GHYIAYCWNNLNNR 641
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE----NHVDVHLP 116
W+EFDD+ V+ + + S V +E V E E ++++V P
Sbjct: 642 WYEFDDQSVTEV-----------TESTVQNAEAYVLFYRKSNEEAKRERQKLSNLNVMEP 690
Query: 117 S-----------SEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
S ++Y + ++ND + + K S VV N+
Sbjct: 691 SLLQFYISRQWLNKYRTFAEPGPISNNDFLCIHGGVPPYKATSIEDLVVMLPQNIW---- 746
Query: 166 MIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVP 225
D+++ G + L + E K+ K R+ + E + E P
Sbjct: 747 -----DNLYSRYGGGPAVNHLYVCHTCQVEAEKIEKRRKTEL--EMFIRLNKAFQEEDSP 799
Query: 226 SLEEPFYWISSDWLRQW------ADKIFPSTLDNTSI---QCLHGKVPESKIGSMKRISS 276
S+ FY IS W R+W D P +DN I +C G V + +IS
Sbjct: 800 SI---FYCISMQWFREWEGFVKAKDSDPPGPIDNAKIAVNKC--GNVVLKQGADSGQISE 854
Query: 277 KAWNKFFFKYNGGPALT 293
+ WN Y GGP +
Sbjct: 855 ETWNFLQSIYGGGPEIV 871
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ V +L+S PSL + +++S WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSSEEARKERRRVSNLMSIME-PSLLQ--FYVSRQWLH 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCVHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 777 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 829
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C + L GA + E W F+
Sbjct: 830 VKGKDGDPPGPIDNTKIAVTKCGNVTL----KQGADSGQISEETWNFL 873
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEV 665
>gi|345806604|ref|XP_003435458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Canis lupus familiaris]
Length = 408
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L++Q LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 164 KMTKEVQYPERLDLQHYLSEQRTGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 222
Query: 64 FDDEHVSN 71
DD VS
Sbjct: 223 MDDAKVST 230
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 47/313 (15%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q LS+ S YDL +V+ H GTA +SGHYIA ++++ W
Sbjct: 597 KISTHVSFPLEGLDLQPFLSKDSSAQTTNYDLLSVICHHGTA-SSGHYIAYCRNDSNNLW 655
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPS--SE 119
+EFDD+ V+ + ++ + V+ + V ER G N ++ PS
Sbjct: 656 YEFDDQSVTEVSE----SCVQNAEAYVLFYKKSNGDTVKER--GRVSNLFNMMEPSLLQF 709
Query: 120 YYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFN- 170
Y + + +F SND ++ ++ + S D+V M+ N
Sbjct: 710 YISRQWLNKFKTFAEPGPISNDDFLCVHGGVPPNKASFIDDLV----------VMLPQNV 759
Query: 171 -DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNR--ELDCISERKQEVRSLLSEAPVPSL 227
D ++ G + L + + KL K R ELD + + E+PV
Sbjct: 760 WDHLYSRYGGGPAVNHLYVCHTCQIDLEKLEKRRKSELDLFVRLNKAFQE--EESPV--- 814
Query: 228 EEPFYWISSDWLRQW------ADKIFPSTLDNTSIQC-LHGKVPESKIGSMKRISSKAWN 280
Y IS W R+W D P +DN+ I +G + + +IS + WN
Sbjct: 815 --VIYCISMQWFREWEGFVKGKDNDIPGPIDNSKITANKNGHLTLRQGADSGQISEETWN 872
Query: 281 KFFFKYNGGPALT 293
Y GGP +T
Sbjct: 873 FLHSIYGGGPLVT 885
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 27/230 (11%)
Query: 181 KDIKELNRSYLDGCEQFKL-RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + E++ S + E + L K D + ER + V +L + PSL + ++IS WL
Sbjct: 661 QSVTEVSESCVQNAEAYVLFYKKSNGDTVKERGR-VSNLFNMME-PSLLQ--FYISRQWL 716
Query: 240 RQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTND 295
++ P + N C+HG VP +K + + W+ + +Y GGPA+ +
Sbjct: 717 NKFKTFAEPGPISNDDFLCVHGGVPPNKASFIDDLVVMLPQNVWDHLYSRYGGGPAVNHL 776
Query: 296 DYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQW-- 349
C TC ID + RRKS L + E + Y +S W ++W
Sbjct: 777 YVCHTCQID-------LEKLEKRRKSELDLFVRLNKAFQEEESPVVIYCISMQWFREWEG 829
Query: 350 -TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ K+ D P D T+ + H L GA + E W F++
Sbjct: 830 FVKGKDNDIPGPIDNSKITANKNGHLTL----RQGADSGQISEETWNFLH 875
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + ++ + SLL+ PSL + ++IS WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKCNEEAQRERRRISSLLNMME-PSLLQ--FYISRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCMHGGVPPHKASFIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVE---GTYY-VSKSWLQQW--- 349
C TC I+ ++ RRK+ + + E T+Y +S W ++W
Sbjct: 777 VCHTCQIE-------SERLEKRRKNELEMFIRLYRAFQEEESSSTFYCISMQWFREWEGF 829
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C + L GA + E W F+
Sbjct: 830 VKGKDSDPPGPIDNAKIAITKCGNAVL----KQGADSGQISEETWNFL 873
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 131/321 (40%), Gaps = 61/321 (19%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVV-----CQPVSERVEGANENHVDVHL 115
W+EFDD+ V+ + S S V +E V C ++R + +++
Sbjct: 654 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKCNEEAQRERRRISSLLNMME 702
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ M+ + S +D+V
Sbjct: 703 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCMHGGVPPHKASFIEDLVL---------- 752
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E +L K RK E+ +
Sbjct: 753 MLPQNIWDNLYSRYGGGPAVNHLYVCHTCQIESERLEK--------RRKNELEMFIRLYR 804
Query: 224 VPSLEE---PFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKR 273
EE FY IS W R+W D P +DN I G + +
Sbjct: 805 AFQEEESSSTFYCISMQWFREWEGFVKGKDSDPPGPIDNAKIAITKCGNAVLKQGADSGQ 864
Query: 274 ISSKAWNKFFFKYNGGPALTN 294
IS + WN Y GGP + +
Sbjct: 865 ISEETWNFLQSIYGGGPEIIH 885
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 858 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 914
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 915 KFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVLMLPQNIWDSLYSRYGGGPAVNHLY 974
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 975 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPTTFYCISMQWFREWESF 1027
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 1028 VKGKDGDPPGPIDNIKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 1071
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 53/315 (16%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 794 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 852
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHLP 116
+EFDD+ V+ + S S V +E V E E N +++ P
Sbjct: 853 YEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEP 901
Query: 117 S--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEM 166
S Y + + +F SN+ ++ ++ ++ S +D+V M
Sbjct: 902 SLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVL----------M 951
Query: 167 IFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPV 224
+ N D ++ G + L + E K+ K R+ + E + E
Sbjct: 952 LPQNIWDSLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTEL--EIFIRLNRAFQEEDS 1009
Query: 225 PSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSK 277
P+ FY IS W R+W D P +DN I G V + +IS +
Sbjct: 1010 PTT---FYCISMQWFREWESFVKGKDGDPPGPIDNIKIAVTKCGNVMLRQGADSGQISEE 1066
Query: 278 AWNKFFFKYNGGPAL 292
WN Y GGP +
Sbjct: 1067 TWNFLQSIYGGGPEV 1081
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + D + +++V SL + PSL + +++S WL
Sbjct: 647 QSVTEVSESCVQNAEAYVLFYKKSNDETQKERRKVTSLFNMME-PSLLQ--FYVSRQWLN 703
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C HG +P +K + I W+ + +Y GGPA+ +
Sbjct: 704 KFKTFAEPGPISNHDFLCAHGGIPPNKAAYIDDLVLMIPQNVWDHLYSRYGGGPAVNHLY 763
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQW--- 349
C TC + + RRK+ + + E + Y +S W ++W
Sbjct: 764 VCHTCQNE-------IEKLEKRRKNELDMFVRLNKAFQEEESPVVIYCISMQWFREWESF 816
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ K++D P D + H L P GA + E W F++
Sbjct: 817 VKGKDIDPPGPIDNSKIAVNKNGHITLKP----GADSGQISEETWNFLH 861
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP E L MQ L+ + S L YDL +V+ H GTA +SGHYIA ++E W
Sbjct: 583 KIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTA-SSGHYIAYCRNELNQLW 641
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 642 YEFDDQSVTEV 652
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 642 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 699
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 700 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 748
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 749 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 798
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 799 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 856
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 857 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 913
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 914 ETWNFLQSIYGGGPEV 929
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 706 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 762
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 763 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 822
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 823 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 875
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 876 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 919
>gi|345314660|ref|XP_001510634.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like, partial
[Ornithorhynchus anatinus]
Length = 286
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+Y+LSAVLIH+G + SGHYIA +KD T +W++F+DE + +
Sbjct: 188 VYELSAVLIHRGVSAYSGHYIAHVKDPQTSEWYKFNDEDIEKM 230
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L+++ +S+P+ +IY L AVL+H G + ++GHY IK N GQW++
Sbjct: 327 KITKEVKYPEYLDIRPYMSQPNGEPIIYALYAVLVHTGFSCHAGHYYCYIKASN-GQWYQ 385
Query: 64 FDDEHVSN 71
+D VSN
Sbjct: 386 MNDSTVSN 393
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 872
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 653 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 701
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 702 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 751
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 752 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 809
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 810 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 866
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 867 ETWNFLQSIYGGGPEV 882
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SGHY +K N GQW++
Sbjct: 291 KMTKEVRYPERLDMQHCLSEQRAGLLVYVLYAVLVHAGRSCHSGHYFCFVKAGN-GQWYK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|21619540|gb|AAH31366.1| Usp33 protein, partial [Mus musculus]
Length = 685
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 435 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 491
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 492 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 551
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 552 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 604
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 605 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 648
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 371 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 428
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 429 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 477
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 478 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 527
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 528 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 585
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 586 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 642
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 643 ETWNFLQSIYGGGPEV 658
>gi|449508398|ref|XP_002189650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Taeniopygia guttata]
Length = 911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + ++ + LL+ PSL + +++S WL
Sbjct: 661 QSVTEVSESTVQNAEAYVLFYRKSSEEAQRERRRISGLLNMME-PSLLQ--FYVSRQWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 718 KFKTFAEPGPISNNDFLCMHGGVPPHKANFIEDLVVMLPQNIWDNLYSRYGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ ++ RRK+ + + + T+Y +S W ++W
Sbjct: 778 VCHTCQIE-------SERIEKRRKNELEMFIRLNRAFQEEESPSTFYCISMHWFREWEGF 830
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C + L GA + E W F+
Sbjct: 831 VKGKDSDPPGPIDNAKIAVTKCGNTVL----KQGADSGQISEETWNFL 874
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 597 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 655 WYEFDDQSVTEV 666
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 872
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 653 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 701
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 702 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 751
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 752 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 809
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 810 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 866
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 867 ETWNFLQSIYGGGPEV 882
>gi|449508402|ref|XP_004176928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2
[Taeniopygia guttata]
Length = 903
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + ++ + LL+ PSL + +++S WL
Sbjct: 653 QSVTEVSESTVQNAEAYVLFYRKSSEEAQRERRRISGLLNMME-PSLLQ--FYVSRQWLN 709
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 710 KFKTFAEPGPISNNDFLCMHGGVPPHKANFIEDLVVMLPQNIWDNLYSRYGGGPAVNHLY 769
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ ++ RRK+ + + + T+Y +S W ++W
Sbjct: 770 VCHTCQIE-------SERIEKRRKNELEMFIRLNRAFQEEESPSTFYCISMHWFREWEGF 822
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C + L GA + E W F+
Sbjct: 823 VKGKDSDPPGPIDNAKIAVTKCGNTVL----KQGADSGQISEETWNFL 866
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 589 KIGTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 646
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 647 WYEFDDQSVTEV 658
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 872
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 653 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 701
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 702 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 751
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 752 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 809
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 810 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 866
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 867 ETWNFLQSIYGGGPEV 882
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 587 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 643
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 644 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 703
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 704 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 756
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 757 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 800
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 523 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 580
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 581 WYEFDDQSVTEV 592
>gi|116787160|gb|ABK24394.1| unknown [Picea sitchensis]
Length = 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Query: 13 GELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
G +++Q++ +Q IYDL AVL HKG + +SGHY+A +K EN G+W EFDDE+
Sbjct: 396 GAMDIQKQ----AQFTGIYDLVAVLTHKGRSADSGHYVAWVKQEN-GKWIEFDDEN 446
>gi|409082184|gb|EKM82542.1| hypothetical protein AGABI1DRAFT_125004 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1127
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 2 KKKITSPFCFPGELNMQRRL---SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
++K FP LNM + + + + D +Y+L+ +L+HKG + GHY A + D
Sbjct: 362 RRKSKYTISFPTILNMNQFVLKGNHQHEEDNLYELAGILLHKGASAYHGHYEAQVYDIEK 421
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQP---VSERVEGANENHVDVHL 115
W++F+DE V+ + + SG + +P Q +R +E+ +D
Sbjct: 422 RSWFQFNDEVVTKIKSLGDKKKPKDSGITIDEGKPTSSQTKGSSKKRTRIVSEDEMDSSP 481
Query: 116 PSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKD----------VVHDVNN 159
P +N+ +S DAYML+Y R ++ + + V+H +NN
Sbjct: 482 PKVSL--STNI---SSRDAYMLIYVRRSERNQTTDTETPAPPEEALSVIHSLNN 530
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 619 ESCELMQKLNYCDKDISVFLVRGKEA-------PRSILEASESMFEPDRRASKRSRKTRS 671
E C L +K + DI+V L+RGK+ P + A + R R + R
Sbjct: 922 EECRLKRKTEWVTTDIAVRLLRGKDVKTFPECRPVATYSAKNRTRQSKRLRQARDNEKRR 981
Query: 672 FVNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLADLNIFPGDKLWV 730
F V+ T++ +K+ I ES + Q + +GQ + + + TL DL IF D + +
Sbjct: 982 FA---VTKKTTVKDVKIKIQESFNIPTICQRLFFRGQELENND-VTLEDLQIFANDIMDL 1037
Query: 731 -QDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLS 769
++SE+HE +E +K + E GF GT+L+ ++
Sbjct: 1038 REESEVHEIDSDFEERPVKKQR-REAERGFEGTVLSGGIN 1076
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 651 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 707
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 708 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 767
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 768 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 820
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 821 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 864
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 645 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 693
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 694 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 743
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 744 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 801
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 802 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 858
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 859 ETWNFLQSIYGGGPEV 874
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 651 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 707
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 708 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 767
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 768 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 820
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 821 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 864
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 645 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 693
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 694 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 743
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 744 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 801
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 802 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 858
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 859 ETWNFLQSIYGGGPEV 874
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 627 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 683
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 684 KFKTFAEPGPISNNDFLCIHGGVPPRKANYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 743
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRR 352
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 744 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 796
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
D P D +C G +M + GA + E W F+
Sbjct: 797 VK-DPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 836
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 563 KISTHVSFPLEGLDLQPFLAKDSPTQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 620
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 621 WYEFDDQSVTEV 632
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 872
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 132/314 (42%), Gaps = 55/314 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 653 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 701
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 702 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 751
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 752 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 809
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 810 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 866
Query: 277 KAWNKFFFKYNGGP 290
+ WN Y GGP
Sbjct: 867 ETWNFLQSIYGGGP 880
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL++ G + +SGHY +K N GQW++
Sbjct: 280 KMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVYAGRSCHSGHYFCFVKAGN-GQWYK 338
Query: 64 FDDEHVS 70
DD VS
Sbjct: 339 MDDAKVS 345
>gi|29612641|gb|AAH49870.1| Usp33 protein, partial [Mus musculus]
Length = 393
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 143 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 199
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 200 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 259
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKS---LKGLADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 260 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 312
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 313 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 356
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 49/311 (15%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 79 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 137
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHLP 116
+EFDD+ V+ + S S V +E V E E N +++ P
Sbjct: 138 YEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEP 186
Query: 117 S--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEM 166
S Y + + +F SN+ ++ ++ ++ S +D+V + +
Sbjct: 187 SLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL------MLPQN 240
Query: 167 IFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPS 226
I+ D+++ G + L + E K+ K R+ + E + E P+
Sbjct: 241 IW--DNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEEDSPA 296
Query: 227 LEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAW 279
FY IS W R+W D P +DNT I G V + +IS + W
Sbjct: 297 T---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISEETW 353
Query: 280 NKFFFKYNGGP 290
N Y GGP
Sbjct: 354 NFLQSIYGGGP 364
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + D + +++V SL + PSL + +++S WL
Sbjct: 647 QSVTEVSESCVQNAEAYVLFYKKSNDETQKERRKVTSLFNMME-PSLLQ--FYVSRQWLN 703
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C HG +P +K + I W+ + +Y GGPA+ +
Sbjct: 704 KFKTFAEPGPISNHDFLCAHGGIPPNKATYIDDLVLMIPQNVWDHLYSRYGGGPAVNHLY 763
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQW--- 349
C TC + + RRK+ + + E + Y +S W ++W
Sbjct: 764 VCHTCQNE-------IEKLEKRRKNELDMFVRLNKAFQEEESPVVIYCISMQWFREWESF 816
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ K++D P D + H L P GA + E W F++
Sbjct: 817 VKGKDIDPPGPIDNSKIAVNKNGHITLKP----GADSGQISEETWNFLH 861
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP E L MQ L+ + S L YDL +V+ H GTA +SGHYIA ++E W
Sbjct: 583 KIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTA-SSGHYIAYCRNELNQLW 641
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 642 YEFDDQSVTEV 652
>gi|444517773|gb|ELV11787.1| Ubiquitin carboxyl-terminal hydrolase 20 [Tupaia chinensis]
Length = 752
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 132/322 (40%), Gaps = 67/322 (20%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L++ + YDL +V+ H GTA SGHY+A ++ GQW
Sbjct: 439 KISSHVSFPLEGLDLRPFLAKECTSQITAYDLLSVICHHGTA-GSGHYVAYCQNVINGQW 497
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+EFDD++V+ V E V E +V + SSE
Sbjct: 498 YEFDDQYVTE---------------------------VHETVVQNAEAYVLFYRKSSE-E 529
Query: 122 NGSNVERFTS-NDAYMLMYNLRRD--------KEDSKRKDVVHDVNNMEIESEMIFFNDD 172
G VE + + +L + + R+ E + + I + DD
Sbjct: 530 AGQQVEALAAMREPSLLRFYVSREWLNKFNTFAEPGPITNHTFLCTHGGIPPNKYHYIDD 589
Query: 173 --IFLPSHLGKDIKELNR-------SYLDGCEQFKLRKNRELDCISERKQ-EVRSLLSEA 222
+ LP ++ + + NR S+L C ++ E++ +++R++ E+ + +
Sbjct: 590 LVVILPQNVWEHL--YNRFGGGPAVSHLYVCAICQV----EIEALAKRRRVEIDTFIKLN 643
Query: 223 PVPSLEEP---FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGK--VPESKIGSM 271
EE Y IS W R+W D P +DN+ I + G V +
Sbjct: 644 KAFQAEESPSVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADY 703
Query: 272 KRISSKAWNKFFFKYNGGPALT 293
+IS + WN Y GGP +
Sbjct: 704 GQISEETWNYLNHLYGGGPEIA 725
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E E Q+V +L + PSL +++S +WL
Sbjct: 505 VTEVHETVVQNAEAYVLFYRKSSE-----EAGQQVEALAAMRE-PSLLR--FYVSREWLN 556
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+++
Sbjct: 557 KFNTFAEPGPITNHTFLCTHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVSHLY 616
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 617 VCAICQVE---IEALAKRRRVEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 673
Query: 354 NLDAPSEADGGPTTSIR 370
+ + P D ++
Sbjct: 674 DNEPPGPIDNSRIAQVK 690
>gi|390363731|ref|XP_791204.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like, partial
[Strongylocentrotus purpuratus]
Length = 1199
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE-NTGQ 60
KKK+ + FP E++M + L+ +YDL AVLIH+G SGHY+A I+ + G
Sbjct: 382 KKKLNNFLQFPEEIDMSKHLARRDN-SAMYDLEAVLIHRGPTAYSGHYVAHIRSHGDGGV 440
Query: 61 WWEFDDEHVSNL 72
W++F+DE + +
Sbjct: 441 WFKFNDEEIQKM 452
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDE-NTGQWWEFDDEHVSNLGHHPFGEGSS---SSG 85
+YDL AVLIH+G SGHY+A I+ + G W++F+DE + + G S+G
Sbjct: 518 MYDLEAVLIHRGPTAYSGHYVAHIRSHGDGGVWFKFNDEEIQKMEGKNLKLGCEDELSAG 577
Query: 86 SKVVRSEPVVCQPVSERV-----------EGANENHVDVHLPSSEYYNGSN-VERFTSND 133
+ R + S+ + E+HVD +S + + ++ D
Sbjct: 578 KEGKRPKVPKGNHASKNAYMLVYKRRSTDQRGTESHVDNSTTTSNVESLPDYLQELIGRD 637
Query: 134 AYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLD- 192
LR ED V +NN + E + F N L H K++K ++ D
Sbjct: 638 NEKFEDWLREMHEDETTGSKVGPINNYKFECK--FKN----LDPHKVKELKRISSKAADL 691
Query: 193 -----GCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLE-------------EPFYWI 234
G + +LR + C++ KQ+ + + +A + + + E +W+
Sbjct: 692 LFAKYGSDGLQLRMTQSKMCLACVKQKCQVMRIQAQLVADQKFVTDNTKAKCQSEDGFWV 751
Query: 235 SSDWLRQW 242
D L+QW
Sbjct: 752 GKDSLKQW 759
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 237 DWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP 290
DWLR+ K+ P ++N +C + K+ +KRISSKA + F KY
Sbjct: 643 DWLREMHEDETTGSKVGP--INNYKFECKFKNLDPHKVKELKRISSKAADLLFAKYGSDG 700
Query: 291 A---LTNDDYCMTCLIDGAHTV-VCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWL 346
+T C+ C+ + + A D+ K + D+ + E ++V K L
Sbjct: 701 LQLRMTQSKMCLACVKQKCQVMRIQAQLVADQ----KFVTDNTKAKCQSEDGFWVGKDSL 756
Query: 347 QQWTR 351
+QW R
Sbjct: 757 KQWKR 761
>gi|426200011|gb|EKV49935.1| hypothetical protein AGABI2DRAFT_115001 [Agaricus bisporus var.
bisporus H97]
Length = 1127
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
++K FP LNM + + E + D +Y+L+ +L+HKG + GHY A + D
Sbjct: 362 RRKSKYTISFPTILNMNQFVLEGNHQHEEDNLYELAGILLHKGASAYHGHYEAQVYDIEK 421
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEP---VVCQPVSERVEGANENHVDVHL 115
W++F+DE V+ + + SG + +P + + +R +E+ +D
Sbjct: 422 RSWFQFNDEVVTRIKSLGDKKKPKDSGITIDEGKPTSSLTKGSLKKRTRIVSEDEMDSSP 481
Query: 116 PSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKD----------VVHDVNN 159
P +N+ +S DAYML+Y R ++ + + V+H +NN
Sbjct: 482 PKVSL--STNI---SSRDAYMLIYVRRSERNQTTDTETPAPPEEALSVIHSLNN 530
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 610 ICEDCIGERESCELMQKLNYCDKDISVFLVRGKEA-------PRSILEASESMFEPDRRA 662
I E I E C L +K + DI+V L+RGK+ P + A + R
Sbjct: 913 IYEPGISVCEECRLKRKTEWVTTDIAVRLLRGKDVKTFPECRPVATYSAKNRTRQSKRLR 972
Query: 663 SKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQ-ILHKGQRIIDQECATLADLN 721
R + R F V+ T++ +K+ I ES + Q + +GQ + + + TL DL
Sbjct: 973 QARDNEKRRFA---VTKKTTVKDVKIKIQESFNIPTICQRLFFRGQELENND-VTLEDLQ 1028
Query: 722 IFPGDKLWV-QDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLS 769
IF D + + ++SE+HE +E +K + E GF GT+L+ ++
Sbjct: 1029 IFANDIMDLREESEVHEIDSDFEERPVKKQR-REAERGFEGTVLSGGIN 1076
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F ELN++ +S L+YDL VL+H G +VNSGHYI +K N G W
Sbjct: 179 KINKHVAFGTELNLRPYMSATKGPALMYDLYGVLVHHGYSVNSGHYICYVKAAN-GLWHV 237
Query: 64 FDDEHVSNLG 73
DD V+ +G
Sbjct: 238 CDDHRVAAVG 247
>gi|56758386|gb|AAW27333.1| SJCHGC05977 protein [Schistosoma japonicum]
Length = 412
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ S D +Y L AV++H G+ N GHYI L+K G W+
Sbjct: 278 KLSYRVAFPMELRLFNTSSDSSNADRLYSLMAVVVHSGSGPNRGHYITLVKSH--GLWFL 335
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDDE V + + GSS+ SK
Sbjct: 336 FDDELVEKIHRTNIEDFFGSSTETSK 361
>gi|401883074|gb|EJT47310.1| ubiquitin carboxyl-terminal hydrolase 5 [Trichosporon asahii var.
asahii CBS 2479]
Length = 1114
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E++++ L E + + IY L VL+H G +N+GHY ALIK E G+W
Sbjct: 417 KINDRHEFPMEIDLEEFLEEGADRSVPHIYKLHGVLVHHGD-LNTGHYFALIKPEKDGRW 475
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+FDD+ V+ + E + G ++ P +++ A ++ V++ SE
Sbjct: 476 LKFDDDRVTPVFDREVLE-DNFGGGELPNGPPHRLAARDPKIKKATNAYMLVYIRESELD 534
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
N + FT D + + R D E + + + N + DDIF H G
Sbjct: 535 NV--LAPFTEADTPVHLKK-RLDDEREQLEARRREKNEQHLYLTAKVITDDIF-ARHQGF 590
Query: 182 DIKELNRSYLDGCE--QFKLRKNRELDCISER 211
D+ + L E F++ K +R
Sbjct: 591 DLASFDDKNLPATELPTFRVLKTETFATFRQR 622
>gi|406700328|gb|EKD03500.1| ubiquitin carboxyl-terminal hydrolase 5 [Trichosporon asahii var.
asahii CBS 8904]
Length = 1113
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E++++ L E + + IY L VL+H G +N+GHY ALIK E G+W
Sbjct: 416 KINDRHEFPMEIDLEEFLEEGADRSVPHIYKLHGVLVHHGD-LNTGHYFALIKPEKDGRW 474
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+FDD+ V+ + E + G ++ P +++ A ++ V++ SE
Sbjct: 475 LKFDDDRVTPVFDREVLE-DNFGGGELPNGPPHRLAARDPKIKKATNAYMLVYIRESELD 533
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
N + FT D + + R D E + + + N + DDIF H G
Sbjct: 534 NV--LAPFTEADTPVHLKK-RLDDEREQLEARRREKNEQHLYLTAKVITDDIF-ARHQGF 589
Query: 182 DIKELNRSYLDGCE--QFKLRKNRELDCISER 211
D+ + L E F++ K +R
Sbjct: 590 DLASFDDKNLPATELPTFRVLKTETFATFRQR 621
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 793 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 849
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 850 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 909
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 910 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREW 959
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 729 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 786
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 787 WYEFDDQSVTEV 798
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+K T +P L+MQ SE ++ LIY L AVL+H G++ ++GHY IK N GQW+
Sbjct: 205 EKTTKAVQYPECLDMQTYTSEQNRGPLIYGLYAVLVHAGSSCHNGHYFCYIKAGN-GQWY 263
Query: 63 EFDDEHVS 70
+ DD V+
Sbjct: 264 KMDDAEVT 271
>gi|145549191|ref|XP_001460275.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428104|emb|CAK92878.1| unnamed protein product [Paramecium tetraurelia]
Length = 1032
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIK-DENTGQWW 62
KI F + E+N ++ L +Q+D IY L AVL+H+G A+N GHY I+ +N+ +W+
Sbjct: 353 KIHDYFQYDDEINFKQYL--INQVDEIYQLYAVLVHRGEAINHGHYYCYIRPTQNSQEWF 410
Query: 63 EFDDEHVS 70
+FDD+ V+
Sbjct: 411 KFDDKIVT 418
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 35/232 (15%)
Query: 183 IKELNRSYLDGCEQFKL-RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ E++ S + E + L K + + ER++ S+L PSL + ++IS WL +
Sbjct: 661 VTEVSESCVQNAEAYVLFYKKSNEEALKERRR--VSVLYNMMEPSLLQ--FYISRQWLNK 716
Query: 242 WADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDDY 297
+ P + NT C HG VP +K + + W+ + KY GGPA+ +
Sbjct: 717 FKTFAEPGPISNTDFLCSHGGVPPNKASFIDDLIVMLPQNVWDHLYSKYGGGPAVNHLYV 776
Query: 298 CMTCLIDGAHTVVCADSYRDRRKSL--------KGLADDVLSGKLVEGTYYVSKSWLQQW 349
C TC ++ + + RRKS K +D + Y +S W ++W
Sbjct: 777 CHTCQME-------IEKFEKRRKSELDMFVRLNKAFQEDESPAVI----YCISMQWFREW 825
Query: 350 ---TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ K+ + P D + + H L GA + E W F++
Sbjct: 826 EGFVKGKDNEPPGPVDNTKISVNKNGHLTL----KQGADSGQISEETWNFLH 873
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S YDL +V+ H GTA +SGHYIA +++ W
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSFSQTTNYDLLSVICHHGTA-SSGHYIAYCRNDENNLW 653
Query: 62 WEFDDEHVSNL 72
+EFDD V+ +
Sbjct: 654 YEFDDHRVTEV 664
>gi|348586746|ref|XP_003479129.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Cavia
porcellus]
Length = 857
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 104/259 (40%), Gaps = 43/259 (16%)
Query: 167 IFFNDDIFLPSHLG--------------------KDIKELNRSYLDGCEQFKLRKNRELD 206
+F I+LP ++G + + E++ S + E + L + +
Sbjct: 577 VFITIMIYLPLYIGGHYIAYCRNNLNKLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 636
Query: 207 CISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHGKVPES 266
+ ++ + +LL+ PSL + ++IS WL ++ P + N C+HG VP
Sbjct: 637 EAQKERRRISNLLNIME-PSLLQ--FYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPR 693
Query: 267 KIGSMK----RISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSL 322
K ++ + W+ + +Y GGPA+ + C TC I+ A+ RRK+
Sbjct: 694 KASYIEDLVLMLPQHIWDNLYSRYGGGPAVNHLYICHTCQIE-------AEKIEKRRKTE 746
Query: 323 KGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMP 378
+ + + T+Y +S W ++W D P D +C G ++
Sbjct: 747 LEIFIRLNRAFQEEDSPATFYCISMQWFREWESFVK-DPPGPIDNTKIAVTKC--GNVLL 803
Query: 379 EKAGGAKRLLVPEILWLFI 397
+ GA + E W F+
Sbjct: 804 RQ--GADSGQISEETWNFL 820
>gi|328770845|gb|EGF80886.1| hypothetical protein BATDEDRAFT_88259 [Batrachochytrium
dendrobatidis JAM81]
Length = 497
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
YDL AVL H G A +SGHYI +K + T WW+FDD+ VS +
Sbjct: 428 YDLVAVLTHVGRAADSGHYIGWVKSQTTDNWWKFDDDRVSQV 469
>gi|294953129|ref|XP_002787609.1| ubiquitin specific protease, putative [Perkinsus marinus ATCC
50983]
gi|239902633|gb|EER19405.1| ubiquitin specific protease, putative [Perkinsus marinus ATCC
50983]
Length = 976
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 39/116 (33%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPF------GEGSSS 83
+YD L H T ++GHY A +KD +TG WW FDD HV + P GE S
Sbjct: 303 VYDCVGALEHHSTVAHAGHYTATLKDHSTGIWWRFDDGHVREVDWAPVDGELQAGESPSE 362
Query: 84 SGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMY 139
K R+ P ER TS+ AYML+Y
Sbjct: 363 RALKRRRTAP---------------------------------ERATSHTAYMLLY 385
>gi|449680173|ref|XP_002165294.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12A-like [Hydra
magnipapillata]
Length = 396
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP +L + L + D +YDLSA+++H GT N GHYIA++K N W
Sbjct: 295 KLSHRVTFPLQLRLFNTLENATHRDRLYDLSAIVVHCGTGPNRGHYIAIVKSHNI--WLL 352
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 353 FDDDIVDKI 361
>gi|294659562|ref|XP_002770601.1| DEHA2G09328p [Debaryomyces hansenii CBS767]
gi|199434060|emb|CAR65936.1| DEHA2G09328p [Debaryomyces hansenii CBS767]
Length = 485
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 10 CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT---GQWWEFDD 66
P +N++ PS +Y+LSA++ H G++ +SGHY + +KD+N +WW+F+D
Sbjct: 396 VLPSNVNLEETTENPSS---VYELSAIITHSGSSADSGHYQSFVKDQNDLDGNKWWKFND 452
Query: 67 EHVSNLGHHPF----GEGSSSSGSKVV 89
+ VS++ G G S S +V
Sbjct: 453 DKVSSVTREKIETLAGGGESDSALILV 479
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 704 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 760
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 761 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 820
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C +C I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 821 ICHSCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 873
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 874 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 917
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 640 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 697
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 698 WYEFDDQSVTEV 709
>gi|384486421|gb|EIE78601.1| hypothetical protein RO3G_03305 [Rhizopus delemar RA 99-880]
Length = 290
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 48/192 (25%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ--LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
++I FP ++++ S PS + IY L VL+H G ++ GHY AL+K E G+
Sbjct: 110 QQINDHHVFPDTIDLREYCSTPSDDPEEHIYLLHGVLVHSGD-IDGGHYFALLKPEKDGK 168
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+ FDD+ V+ PV + V E G E D + +
Sbjct: 169 WFRFDDDRVT----------------------PVTLREVFEDNYGDTEASDDDEIRCT-- 204
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLG 180
+ +++RFT+ AYML+Y + +K +++ + EI P HL
Sbjct: 205 -SAKSLKRFTN--AYMLVYF-----QKNKLNEILESIKEEEI-------------PKHLN 243
Query: 181 KDIKELNRSYLD 192
K +K+ R+ D
Sbjct: 244 KSVKDNARALKD 255
>gi|322794009|gb|EFZ17247.1| hypothetical protein SINV_11807 [Solenopsis invicta]
Length = 914
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP +L+M + P L Y L AVL HKG + +SGHYIA I + ++G+W
Sbjct: 306 KKKLNSYIQFPEDLDMSEYIRCPPHTHL-YSLVAVLSHKGPSAHSGHYIANICN-SSGEW 363
Query: 62 WEFDDEHVSNLGHHPFGEG 80
++F D+ V + + +G
Sbjct: 364 YQFSDDKVEKMQNKRIEDG 382
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 106/298 (35%), Gaps = 59/298 (19%)
Query: 231 FYWISSDWLRQW----ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKY 286
+YWI +DWL +W + + +DN+++ C H ++ K+ MK + + KY
Sbjct: 629 YYWIPTDWLSKWLNGHSSALDVRPIDNSNLMCSHSRLDPLKVSRMKCVPELVAKMLYDKY 688
Query: 287 NGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWL 346
GGP L C C+ + + K + L + E +Y + L
Sbjct: 689 QGGPQLDQTFLCEICVKQRCKLLRFKVALERDHKEVGELIRTF--KEPTETSYIIGTDSL 746
Query: 347 QQWTR----------RKNLD----------APSEADGGP-----------------TTSI 369
+ W R + +D ++ DG +
Sbjct: 747 RSWRRLAMETFQEDIEQKVDDCQDTLQEDSKNTDKDGNDCPKEVEENKENEVIINFNEDL 806
Query: 370 RCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDAL 429
C H L K + R ++P+ WL + K PD +P+ S C C + +
Sbjct: 807 LCEHKSL---KTADSSRKVIPQEAWLLL----KKYFPDS----KEYPIGSPSCSVCEEKM 855
Query: 430 SEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCK-----YYLLPSTWLTKWRNYI 482
+ + + +++ L G++ + C +Y++ +L WR++I
Sbjct: 856 ENAQRAKKDDKIKAKQQKDELTDLYYGRNRNEIVKCNDSEKSFYIVEKGFLDSWRSFI 913
>gi|256070419|ref|XP_002571540.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ S D +Y+L AV++H G+ N GHY+ L+K G W+
Sbjct: 277 KLSYRVAFPMELRLFNMSSDSSNDDRLYNLMAVVVHSGSGPNRGHYVTLVKSH--GLWFL 334
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDDE V + + GSS+ SK
Sbjct: 335 FDDELVEKIHRTNIEDFFGSSTETSK 360
>gi|350645319|emb|CCD59942.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ S D +Y+L AV++H G+ N GHY+ L+K G W+
Sbjct: 277 KLSYRVAFPMELRLFNMSSDSSNDDRLYNLMAVVVHSGSGPNRGHYVTLVKSH--GLWFL 334
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDDE V + + GSS+ SK
Sbjct: 335 FDDELVEKIHRTNIEDFFGSSTETSK 360
>gi|428183490|gb|EKX52348.1| hypothetical protein GUITHDRAFT_161377 [Guillardia theta CCMP2712]
Length = 351
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + D ++L AV++H G+ +N GHY+ LIK QW+
Sbjct: 253 KKLSHRVVFPVELKLNNTTDAAADEDAFFNLFAVVVHVGSGMNHGHYVCLIKIHE--QWF 310
Query: 63 EFDDEHVSNLG----HHPFGEGSSSSGS 86
FDD+ V + H FG G+
Sbjct: 311 HFDDDTVEGVDDSHLHSVFGSAQEGGGN 338
>gi|307174453|gb|EFN64948.1| Ubiquitin carboxyl-terminal hydrolase 48 [Camponotus floridanus]
Length = 919
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP +L+M + Q L Y+L AVL HKG + +SGHYIA I + ++G+W
Sbjct: 306 KKKLNSYIQFPEDLDMSEYVRCQPQTHL-YNLVAVLSHKGPSAHSGHYIANICN-SSGEW 363
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
++F D+ V + + +G + + + R
Sbjct: 364 YQFSDDKVEKMQNKRIEDGVNDNVKPIKR 392
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 125/332 (37%), Gaps = 66/332 (19%)
Query: 201 KNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW------ADKIFPSTLDNT 254
K +E++ + ++Q V + + + + +YWI +DWL +W D + P +DN+
Sbjct: 603 KQKEIEDQNFKRQLVIDIYNIIQSTTCWDEYYWIPTDWLSKWLNGHSITDSVPP--IDNS 660
Query: 255 SIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADS 314
++ C H ++ K+ K I + A + KY GGP L C C+ + +
Sbjct: 661 TLMCSHYRLDPLKVSRAKCIPAIAAEILYDKYRGGPRLDQTSLCEICVKRRCKLLRFKLT 720
Query: 315 YRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNL---------------DAPS 359
+ K +++ V + K T Y+ + +W R+ + D P
Sbjct: 721 L---ERDYKEVSELVRTFKEPSETSYIIGTNSLRWWRKLAIETFQEDMEQEMDDCQDVPQ 777
Query: 360 E------ADGGP------------------TTSIRCPHGQLMPEKAGGAKRLLVPEILWL 395
E DG + C H L K + R ++P+ WL
Sbjct: 778 EESKNVDKDGNDCPKEVEENVEENEIIINFNEDLLCEHNSL---KTADSSRRVIPQEAWL 834
Query: 396 FIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLAL 455
+ K PD +P+ S C C + + + + + +++ L
Sbjct: 835 IL----RKYFPDS----KEYPIGSSSCAICEERMENAQKAKKDDKIKAKQQKDELTDLYY 886
Query: 456 GKSIPLSLDCK-----YYLLPSTWLTKWRNYI 482
GK+ L C +Y++ +L WR++I
Sbjct: 887 GKNRNEILKCDDPNRLFYIVEKGFLDSWRSFI 918
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 23/225 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ V +L+S PSL + +++S WL
Sbjct: 652 QSVTEVSESTVQNAEAYVLFYRKSSEEARKERRRVSNLMSIME-PSLLQ--FYVSRQWLH 708
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 709 KFKTFAEPGPISNNDFLCVHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 768
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQWTRR 352
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 769 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 821
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
D P D +C + L GA + E W F+
Sbjct: 822 VK-DPPGPIDNTKIAVTKCGNVTL----KQGADSGQISEETWNFL 861
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 588 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 645
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 646 WYEFDDQSVTEV 657
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 183 IKELNRSYLDGCEQFKL-RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ E++ S + E + L K D + ER++ S+L PSL + ++IS WL +
Sbjct: 645 VTEVSESCVQNAEAYVLFYKKSNEDALKERRR--VSVLCNMMEPSLLQ--FYISRQWLNK 700
Query: 242 WADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDDY 297
+ P + N C HG VP +K + + W+ + +Y GGPA+ +
Sbjct: 701 FKTFSEPGPISNRDFLCSHGGVPPNKATFIDDLVVMLPQNVWDHLYSRYGGGPAVNHLYV 760
Query: 298 CMTCLIDGAHTVVCADSYRDRRKS----LKGLADDVLSGKLVEGTYYVSKSWLQQW---T 350
C TC ++ + + RRKS L + Y +S W ++W
Sbjct: 761 CHTCQME-------IEKFDKRRKSELDMFVRLNKAFQEDESPSVIYCISMQWFREWEGFV 813
Query: 351 RRKNLDAPSEAD 362
+ K+ DAP D
Sbjct: 814 KGKDNDAPGPVD 825
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S YDL +V+ H GTA +SGHYIA +++ W
Sbjct: 579 KISTHVSFPLEGLDLQPFLAKDSSCQTTNYDLLSVICHHGTA-SSGHYIAYCRNDGNNLW 637
Query: 62 WEFDDEHVSNL 72
+EFDD V+ +
Sbjct: 638 YEFDDHRVTEV 648
>gi|321261748|ref|XP_003195593.1| hypothetical protein CGB_H1240W [Cryptococcus gattii WM276]
gi|317462067|gb|ADV23806.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 990
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 196/540 (36%), Gaps = 140/540 (25%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L V+ H+GT+ GH+I DE W +DE V
Sbjct: 340 VYELRGVISHQGTSAYHGHFICETYDEIDDIWHICNDELV-------------------- 379
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERF-TSNDAYMLMYNLRRDKEDS 148
QP R V P+++ +R +S DAYML+Y
Sbjct: 380 -------QPKPAR----PHKRTKVDKPATDK------DRLQSSKDAYMLVY--------- 413
Query: 149 KRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKN---REL 205
KR+D ++ +S P+ + + +KE NR + + +RK E
Sbjct: 414 KRRD-----GHVPPQSP----------PAIVMEKVKEENRGLREELNKGVVRKEVLEGEW 458
Query: 206 DCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKI-FP---STLDNTSIQCLHG 261
+ + K + Y + D L W FP + D +SI C H
Sbjct: 459 EHLKGAKMDTD---------------YIVPRDALAAWIQSPSFPDLNTPFDYSSILCAHS 503
Query: 262 KVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKS 321
+V K + IS+ A +K + L D C C+ +G T + + ++
Sbjct: 504 QVDPFKSSDTRTISAVAHDKL----SSYITLPEIDVCPVCVEEGFATRLSKAEQQSALET 559
Query: 322 LKGLADDVLSGKLVEGTYY-VSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEK 380
L + E + + K+WL W R P P+ ++ CPH +P
Sbjct: 560 FDELNTVAEVEEAGEEERWCLPKTWLAHW--RSGKLTPKTLPTHPSYTLFCPHDAPLPST 617
Query: 381 AGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVACLEDSIR 440
+ +P + I A + +F CPECS+ S+ A E I
Sbjct: 618 S-------IPP--FTLITSSAFSLLRSIFGPFPSFHPGRPPCPECSNDASQDA--ESLI- 665
Query: 441 ARKLKERQNHEKLALGKSIPLSLDCK-------YYLLPSTWLTKWRNYI-SPSGKNASSI 492
Q + L KSI LD + YY+LP ++ KW Y+ +P G+
Sbjct: 666 -------QWKTDVKLDKSIKRHLDPRPPAFGLDYYVLPKEFIKKWETYMKTPGGQ----- 713
Query: 493 EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTIVTENDWKWFCEEWG 552
+PE LD + +CE LL+ P + R +++E W+ C+++G
Sbjct: 714 KPE-LDMGLGRGECEHG--LLDWDPQIEKPR--------------VISEVGWRMLCQKYG 756
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+KIT +P L+++ +SEP + Y L AVL+H G + N+GHY +K N GQW+
Sbjct: 340 RKITKDVGYPEFLDIRPFMSEPKGDPITYGLYAVLVHSGYSCNAGHYFCYVKASN-GQWY 398
Query: 63 EFDDE--HVSNL 72
+D H SN+
Sbjct: 399 RMNDHEVHPSNI 410
>gi|157123971|ref|XP_001653999.1| hypothetical protein AaeL_AAEL009702 [Aedes aegypti]
gi|108874166|gb|EAT38391.1| AAEL009702-PA [Aedes aegypti]
Length = 1214
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFP-GELNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+SP FP L+M+ L + + ++ YDL AV+ H GT V GHY + K E TG+W
Sbjct: 572 KISSPVNFPMNGLDMRPYLHKDCKSEVTSYDLGAVICHHGT-VGGGHYTSFAKHEPTGKW 630
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 631 FEFDDQLVTQV 641
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 31/224 (13%)
Query: 191 LDGCEQFKL---RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIF 247
+ CE + L + N ++ I + ++ S+ A + ++IS +WL ++
Sbjct: 646 VQNCEAYVLFYRKNNSKMSTIRAQASDLISVQEHA-----SDIRFYISRNWLHRFNTFAE 700
Query: 248 PSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYCMTCLI 303
P +DN ++ C HG P K + I W+ + K+ GGP + C C
Sbjct: 701 PGPIDNWTLLCPHGAFPPHKAPYFSKLVVPIPQILWDFLYKKFGGGPVCNHIFPCHIC-- 758
Query: 304 DGAHTVVCADSYRDRRKS----LKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRKNLD 356
A+S R+++ D+ Y +S +W +QW R +
Sbjct: 759 -----KKAAESLSRRQRAELEEFTACNDEYQYNDTPTTIYAISMAWFRQWQLFARGVTTE 813
Query: 357 APSEADGGPTTSIRCPHGQLMPEKA--GGAKRLLVPEILWLFIY 398
P D +I P +P ++ G+ + LW F +
Sbjct: 814 EPGPID---NKTIAVPGDTNVPLRSVRQGSDYAQINSALWHFFH 854
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 12/65 (18%)
Query: 339 YYVSKSWLQQWTRRKNLDAPSEADGGPTT--SIRCPHGQLMPEKAGGAKRLLV--PEILW 394
+Y+S++WL ++ + A+ GP ++ CPHG P KA +L+V P+ILW
Sbjct: 685 FYISRNWLHRFN--------TFAEPGPIDNWTLLCPHGAFPPHKAPYFSKLVVPIPQILW 736
Query: 395 LFIYE 399
F+Y+
Sbjct: 737 DFLYK 741
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M +KI P +P L +Q +S+ + Y L AV+ H G+ NSGHY A +K N G
Sbjct: 327 MGRKIPHPVSYPERLTLQPYMSD-GKFGPSYSLYAVISHAGSGPNSGHYYAHVKGGN-GT 384
Query: 61 WWEFDDEHV 69
W+E +DE V
Sbjct: 385 WYEMNDESV 393
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYY-VSKSWLQQW---TRR 352
C TC I+ + + L + + T+Y +S W ++W +
Sbjct: 777 ICHTCQIEAEKIEKKKKTELEIFIRL----NRAFQKEDSPATFYCISMQWFREWESFVKG 832
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
K+ D P D +C G +M + GA + E W F+
Sbjct: 833 KDGDPPGPIDNTKIAVTKC--GSVMLRQ--GADSGQISEETWNFL 873
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEV 665
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 598 KINSHVSFPLEGLDLKPFLAKESPSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 655
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 656 WYEFDDQYVTEV 667
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 664 VTEVHETVVQNAEAYVLFYRKSSE-ESVRERQRVVA--LANLKEPSLLQ--FYISREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFTEPGPITNHTFLCQHGGIPPTKYHYVDDLVVILPQNVWEYLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 779 VCAICQVE-------IETLAKRRKLEIDTFIKLNKEFQAEEAPTVILCISMQWFREWENF 831
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ H QL GA + E W ++
Sbjct: 832 VKGKDNEPPGPIDNSKIAVMKGGHIQL----KQGADYGQISEETWQYL 875
>gi|326437590|gb|EGD83160.1| ubiquitin carboxyl-terminal hydrolase [Salpingoeca sp. ATCC 50818]
Length = 1175
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F FP +++ L +PS + L AVL+H GT GHY A I E G+W+
Sbjct: 429 KINDRFEFPPHIDLSDFLEDPSSSPAKFTLQAVLVHSGTTYG-GHYTAFISPEADGRWYH 487
Query: 64 FDDEHV 69
FDDE V
Sbjct: 488 FDDELV 493
>gi|392597880|gb|EIW87202.1| cysteine proteinase, partial [Coniophora puteana RWD-64-598 SS2]
Length = 275
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP EL + + + D +Y+L A+++H G+ N GHY+++IK G W
Sbjct: 184 KLAYRVAFPFELRLFNTVDDAENPDRMYELFAIVVHIGSGPNHGHYVSIIK--TMGIWLI 241
Query: 64 FDDEHVSNLG----HHPFGEGSSSSGSKVV 89
FDDE V + H FGE S++GS V
Sbjct: 242 FDDETVDTIKENDIHRYFGE--SNAGSAYV 269
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+YDL VL+H G+++NSGHY + +K +N G W+E DDE V+N+
Sbjct: 386 VYDLIGVLVHAGSSMNSGHYYSYVKAQN-GFWFEMDDESVTNV 427
>gi|10434504|dbj|BAB14279.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 684 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 740
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 741 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 800
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKS 321
C TC I+ A+ RRK+
Sbjct: 801 ICHTCQIE-------AEKIEKRRKT 818
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 620 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 677
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 678 WYEFDDQSVTEV 689
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 684 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 740
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 741 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 800
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKS 321
C TC I+ A+ RRK+
Sbjct: 801 ICHTCQIE-------AEKIEKRRKT 818
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 620 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 677
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 678 WYEFDDQSVTEV 689
>gi|426330112|ref|XP_004026068.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Gorilla gorilla gorilla]
Length = 1058
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 802 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 858
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 859 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 918
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKS 321
C TC I+ A+ RRK+
Sbjct: 919 ICHTCQIE-------AEKIEKRRKT 936
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 684 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 740
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 741 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 800
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKS 321
C TC I+ A+ RRK+
Sbjct: 801 ICHTCQIE-------AEKIEKRRKT 818
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 620 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 677
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 678 WYEFDDQSVTEV 689
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
sapiens]
gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
21
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
sapiens]
gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
12
Length = 530
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|440797922|gb|ELR18996.1| Ubiquitin carboxylterminal hydrolase domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1114
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP LNM++ ++ + + + +Y L AVL+H G V+ GHY A ++ QW
Sbjct: 426 KINDLYEFPPTLNMRKYMAADADVSIKPLYRLYAVLVHSGD-VHGGHYYAYVRPTTKMQW 484
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDDE V+ EG + G + R+ V A + P S
Sbjct: 485 FKFDDERVTKARKKDVFEG--NFGGDITRT-----------VRNALGKPITTTYPRSA-- 529
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEM 166
+AYML+Y D +R+ ++ V+ EI +
Sbjct: 530 -----------NAYMLLY-----IRDDEREQILRPVDREEIPKHL 558
>gi|344217691|dbj|BAK64194.1| ubiquitin carboxyl-terminal hydrolase [Cyberlindnera jadinii]
Length = 471
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE-NTGQWWEFDDEHV 69
FP EL + PS L Y+L+AV+ H+GT+ +SGHY A +KD+ N +WW F+D+ V
Sbjct: 387 FPKEL---QNGENPSSL---YNLNAVITHQGTSADSGHYQAFVKDKYNDNRWWRFNDDKV 440
Query: 70 S 70
S
Sbjct: 441 S 441
>gi|328869814|gb|EGG18189.1| meprin and TRAF domain-containing protein [Dictyostelium
fasciculatum]
Length = 1165
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPS--QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+ + FP +L++ L E S + IY L VLIH G +++GHY A I+ TG W
Sbjct: 444 KVNDKYTFPDKLDLSPYLDEGSDKSISSIYRLQGVLIHSGD-IHNGHYYAFIRPSKTGDW 502
Query: 62 WEFDDEHVS 70
+FDDE VS
Sbjct: 503 LKFDDEDVS 511
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDG 305
C TC I+
Sbjct: 777 ICHTCQIEA 785
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNLG 73
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEVS 666
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+ +KI P + L++Q +SE S Y L V+ H G +SGHY A +K + G+
Sbjct: 334 LGRKIGHPVTYDDHLSLQPFMSEGS-FGPTYSLYGVICHAGGGPHSGHYYAFVKSRD-GK 391
Query: 61 WWEFDDEHVSNLGHHPFGEGSS 82
WWE +DE VS + P + S+
Sbjct: 392 WWEMNDEMVSPINGPPLSKKSA 413
>gi|341895363|gb|EGT51298.1| hypothetical protein CAEBREN_11655 [Caenorhabditis brenneri]
Length = 1275
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 KKKITSPFCFPGEL---NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
++K+ +P +P E+ QR +YDL AV IH+G+ + GHY LIK
Sbjct: 319 RQKLKTPLAYPREIPAKAFQRVDQSNPPPAAMYDLFAVTIHEGSNADCGHYYDLIKSPYN 378
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSS 84
+W+ ++DE V L P E +S+
Sbjct: 379 SKWYRYNDETVEALAKPPGTEKPTSA 404
>gi|341898210|gb|EGT54145.1| hypothetical protein CAEBREN_08447 [Caenorhabditis brenneri]
Length = 1275
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 KKKITSPFCFPGEL---NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
++K+ +P +P E+ QR +YDL AV IH+G+ + GHY LIK
Sbjct: 319 RQKLKTPLAYPREIPAKAFQRVDQSNPPPAAMYDLFAVTIHEGSNADCGHYYDLIKSPYN 378
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSS 84
+W+ ++DE V L P E +S+
Sbjct: 379 SKWYRYNDETVEALAKPPGTEKPTSA 404
>gi|294879665|ref|XP_002768751.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871580|gb|EER01469.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 286
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 76/202 (37%), Gaps = 65/202 (32%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPF------GEGSSS 83
+YD L H T ++GHY A +KD +TG WW FDD HV + P GE S
Sbjct: 104 VYDCVGALEHHSTVAHAGHYTATLKDHSTGIWWRFDDGHVREVDWAPVDGEVQAGESPSE 163
Query: 84 SGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRR 143
K R+ P ER +S+ AYML+Y +
Sbjct: 164 RALKRRRTAP---------------------------------ERASSHTAYMLLYVQQG 190
Query: 144 DKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNR 203
K D D LPS L ++ N + L E F ++
Sbjct: 191 YKVD-----------------------DCPDLPSWLAAEVNRKNEA-LRLPETFDHQRLC 226
Query: 204 ELDCISE--RKQEVRSLLSEAP 223
E +++ R+ EVR L+++ P
Sbjct: 227 ESASVAQETRRGEVRKLITKLP 248
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 336 KITKEVGYPEFLNLRPYMSQRNGVPVMYALYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 394
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 395 MNDSLVHASNI 405
>gi|393246859|gb|EJD54367.1| cysteine proteinase, partial [Auricularia delicata TFB-10046 SS5]
Length = 263
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP EL + + + D +Y+L A+++H GT + GHYIA+IK + G W
Sbjct: 172 KLAYRVAFPHELRLFDTVDDAEDPDRLYELFAIVVHIGTGPHHGHYIAIIK--SRGTWLV 229
Query: 64 FDDEHVSNLGHHP----FGEGSSSSG 85
FDD V + FG+G+ SG
Sbjct: 230 FDDNSVETMKESEIPKYFGDGNGGSG 255
>gi|307214716|gb|EFN89645.1| Ubiquitin carboxyl-terminal hydrolase 48 [Harpegnathos saltator]
Length = 919
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP +L+M + Q L Y L AVL HKG + +SGHYIA I + ++G+W
Sbjct: 306 KKKLNSYIQFPEDLDMSEYVRCQPQTHL-YSLVAVLSHKGPSAHSGHYIANICN-SSGEW 363
Query: 62 WEFDDEHVSNLGHHPFGEG 80
++F D+ V + + +G
Sbjct: 364 YQFSDDKVEKMQNKRIEDG 382
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
+YWI +DWL +W AD I P +DN+ + C H ++ K+ K I + +
Sbjct: 634 YYWIPTDWLSKWLNTYSTADGIPP--IDNSILMCSHYRLDPLKVSRAKCIPVAVADILYE 691
Query: 285 KYNGGPALTNDDYCMTCL 302
+Y GGP L C TC+
Sbjct: 692 RYRGGPRLDQTSLCETCV 709
>gi|343172874|gb|AEL99140.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 476
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+QL +YDL AVL HKG + +SGHY+A +K EN G+W E+DD++
Sbjct: 403 TQLTGVYDLVAVLTHKGRSADSGHYVAWVKQEN-GKWVEYDDDN 445
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ L E L+Y L AVL+H G + +SGHY +K N GQW++ DD V+
Sbjct: 297 YPEHLDMQPYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGN-GQWYKMDDSKVT 355
>gi|170063255|ref|XP_001867024.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880931|gb|EDS44314.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1198
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFP-GELNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+SP FP L+M+ L + + ++ YDL AV+ H GT V GHY + K + TG+W
Sbjct: 571 KISSPVHFPLNGLDMRPYLHKDCKSEVTSYDLCAVICHHGT-VGGGHYTSFAKHDPTGKW 629
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+++
Sbjct: 630 FEFDDQLVTHV 640
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ L E L+Y L AVL+H G + +SGHY +K N GQW++ DD V+
Sbjct: 297 YPEHLDMQPYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGN-GQWYKMDDSKVT 355
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 286 KITKDVGYPEFLNIRPYMSQSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 344
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 345 MNDSLVHSSNI 355
>gi|343172872|gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 476
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+QL +YDL AVL HKG + +SGHY+A +K EN G+W E+DD++
Sbjct: 403 AQLTGVYDLVAVLTHKGRSADSGHYVAWVKQEN-GKWVEYDDDN 445
>gi|307107673|gb|EFN55915.1| hypothetical protein CHLNCDRAFT_35373 [Chlorella variabilis]
Length = 404
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK+ FP EL M + D Y+L AV++H G N GHY+AL++ GQW
Sbjct: 279 KKLMHRVTFPWELKMINTTDDCPDADTAYELFAVVVHMGAHPNHGHYVALVRTP-CGQWV 337
Query: 63 EFDDEHVSNL 72
FDDE V+ +
Sbjct: 338 CFDDEQVNAI 347
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 336 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 394
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 395 MNDSLVHASNI 405
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHASNI 407
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSSVHASNI 407
>gi|194676314|ref|XP_580726.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
Length = 1106
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 343 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 401
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 402 MNDSLVHASNI 412
>gi|390604838|gb|EIN14229.1| cysteine proteinase, partial [Punctularia strigosozonata HHB-11173
SS5]
Length = 421
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDEN---TGQ 60
K+ FP EL + + + D +Y L A+++H G + GHYI ++K N GQ
Sbjct: 327 KLAYRVAFPLELRLFNTVDDAQDPDRLYKLFAIVVHIGNGPHHGHYITIVKAANPNAPGQ 386
Query: 61 WWEFDDEHVSNLGHH--PFGEGSSSSGSKVV 89
W FDD++V + P G S+SGS V
Sbjct: 387 WLVFDDDNVDTIKESDIPKYYGDSNSGSAYV 417
>gi|302815964|ref|XP_002989662.1| hypothetical protein SELMODRAFT_184724 [Selaginella moellendorffii]
gi|300142633|gb|EFJ09332.1| hypothetical protein SELMODRAFT_184724 [Selaginella moellendorffii]
Length = 466
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 12 PGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDE 67
P +M +E IYDL AVL HKG + +SGHY+A +K EN G+W EFDD+
Sbjct: 377 PAPSSMDWSTTEQGSPTGIYDLVAVLTHKGRSADSGHYVAWVKQEN-GKWIEFDDD 431
>gi|332020721|gb|EGI61126.1| Ubiquitin carboxyl-terminal hydrolase 48 [Acromyrmex echinatior]
Length = 939
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S FP EL+M + Q L Y L AVL HKG + SGHYIA I + ++G+W
Sbjct: 306 KKKLNSYIQFPEELDMSEYIRCQPQTHL-YSLVAVLSHKGPSAYSGHYIANICN-SSGEW 363
Query: 62 WEFDDEHVSNL 72
++F D+ V +
Sbjct: 364 YQFSDDKVEKM 374
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 111/306 (36%), Gaps = 63/306 (20%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFF 284
+YWI +DWL +W A I P +DN++ C H ++ K+ MK + A +
Sbjct: 629 YYWIPTDWLSKWLIGHSSAVDIRP--IDNSNSMCSHYRLDPLKVSRMKCVPELAAQMLYD 686
Query: 285 KYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKS 344
KY GGP L C C+ + + K + L + VE +Y +
Sbjct: 687 KYLGGPRLDQTFLCEICVKRRCKLLRFKITLERDHKEVGELIRTF--KEPVETSYIIGTD 744
Query: 345 WLQQWTR-----------RKNLDAP---------SEADGGP-----------------TT 367
L+ W R +K D ++ DG
Sbjct: 745 SLRSWRRLAMETFQEDIEQKEDDCQDTLQEESKNTDKDGNDCPKEVEENKENEVIINFNE 804
Query: 368 SIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSD 427
+ C H L K + R ++P+ W+ + K PD +P+ S C C +
Sbjct: 805 DLLCEHKSL---KTADSSRKVIPQEAWVIL----KKYFPDS----KEYPVGSPSCSICEE 853
Query: 428 ALSEVACLEDSIRARKLKERQNHEKLALGKS---IPLSLDC--KYYLLPSTWLTKWRNYI 482
+ + + + +++ L GK+ I +D +Y++ +L WR+++
Sbjct: 854 KMKSAQRAKKDDKIKAKQQKDELTDLYYGKNRNEISTCIDPLKSFYIVEKGFLDSWRSFV 913
Query: 483 SPSGKN 488
G N
Sbjct: 914 RRFGYN 919
>gi|356522666|ref|XP_003529967.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Glycine
max]
Length = 480
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+Q+ IYDL AVL HKG + +SGHY+ +K EN G+W EFDD++
Sbjct: 405 TQMTGIYDLVAVLTHKGRSADSGHYVGWVKQEN-GKWIEFDDDN 447
>gi|302808834|ref|XP_002986111.1| hypothetical protein SELMODRAFT_157786 [Selaginella moellendorffii]
gi|300146259|gb|EFJ12930.1| hypothetical protein SELMODRAFT_157786 [Selaginella moellendorffii]
Length = 466
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 12 PGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDE 67
P +M +E IYDL AVL HKG + +SGHY+A +K EN G+W EFDD+
Sbjct: 377 PAPSSMDWSTTEQGSPTGIYDLVAVLTHKGRSADSGHYVAWVKQEN-GKWIEFDDD 431
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|207079973|ref|NP_001128936.1| DKFZP469E158 protein [Pongo abelii]
gi|55728156|emb|CAH90828.1| hypothetical protein [Pongo abelii]
Length = 339
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 242 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 299
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 300 FDDDIVEKIDAQAIEEFYGLTSDISK 325
>gi|294872805|ref|XP_002766416.1| Ubl carboxyl-terminal hydrolase, putative [Perkinsus marinus ATCC
50983]
gi|239867250|gb|EEQ99133.1| Ubl carboxyl-terminal hydrolase, putative [Perkinsus marinus ATCC
50983]
Length = 378
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 39/116 (33%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPF------GEGSSS 83
+YD L H T ++GHY A +KD +TG WW FDD HV + P GE S
Sbjct: 257 VYDCVGALEHHSTVAHAGHYTATLKDHSTGIWWRFDDGHVREVDWAPVDGEVQAGESPSE 316
Query: 84 SGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMY 139
K R+ P ER +S+ AYML+Y
Sbjct: 317 RALKRRRTAP---------------------------------ERASSHTAYMLLY 339
>gi|148705919|gb|EDL37866.1| ubiquitin specific peptidase 46, isoform CRA_b [Mus musculus]
Length = 359
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 262 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 319
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISK 345
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M KK+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY +K G+
Sbjct: 260 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFCCVK-AGHGK 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|149035244|gb|EDL89948.1| similar to ubiquitin specific protease 46 (predicted) [Rattus
norvegicus]
Length = 347
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 250 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 307
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 308 FDDDIVEKIDAQAIEEFYGLTSDISK 333
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M KK+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY +K G+
Sbjct: 259 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFCCVK-AGHGK 317
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 318 WYKMDDTKVTS 328
>gi|327291163|ref|XP_003230291.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Anolis carolinensis]
Length = 656
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L++ S + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 340 KISSHVSFPLEGLDLRPFLAKESASQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 398
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 399 YEFDDQYVTEV 409
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ P L + ++IS +WL
Sbjct: 406 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQKVVS--LATMKEPGLLQ--FYISREWLN 460
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 461 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLY 520
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + Y +S W ++W
Sbjct: 521 VCSVCQVE-------IEALAKRRKMEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAF 573
Query: 350 TRRKNLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D + H Q+ P GA + E W+++
Sbjct: 574 VKGKDNEPPGPIDNSKIAVAKGSGHVQVKP----GADYGQISEETWIYL 618
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 155 HDVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCEQFKL-RKNRELDCISERKQ 213
+DVNN+ E F+D + + E++ + + E + L K D + ER++
Sbjct: 649 NDVNNLWYE-----FDD---------QSVTEVSEACVQNAEAYVLFYKKSNEDAVKERRR 694
Query: 214 EVRSLLSEAPVPSLEEPFYWISSDWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK- 272
S L PSL + ++IS WL ++ P + N CLHG VP +K +
Sbjct: 695 --VSGLFNMMEPSLLQ--FYISRQWLNKFKTFAEPGPISNDDFLCLHGGVPPNKATFIDD 750
Query: 273 ---RISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDV 329
+ W+ + +Y GGPA+ + C TC + + RRK + +
Sbjct: 751 LVVMLPQNVWDHLYSRYGGGPAVNHLYVCHTCQTE-------IEKLEKRRKQELDMFVRL 803
Query: 330 LSGKLVEGT----YYVSKSWLQQW---TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAG 382
E + Y +S W ++W + K+ D P D T + H L
Sbjct: 804 NKAFQEEESPVVIYCISMQWFREWEGFVKGKDNDPPGPIDNSKITVNKNGHLTL----KQ 859
Query: 383 GAKRLLVPEILWLFIY 398
GA + E W F++
Sbjct: 860 GADSGQISEETWNFLH 875
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S YDL +V+ H GTA N GHYIA +++ W
Sbjct: 597 KISTHVSFPLEGLDLQPFLAKDSSAQTTSYDLLSVICHHGTASN-GHYIAYCRNDVNNLW 655
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 656 YEFDDQSVTEV 666
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M KK+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY +K G+
Sbjct: 259 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFCCVK-AGHGK 317
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 318 WYKMDDTKVTS 328
>gi|393907725|gb|EFO21742.2| hypothetical protein LOAG_06743 [Loa loa]
Length = 1255
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI SP +P L++ D+ YD+ AV+IH+G + GHY LIK T QW
Sbjct: 307 KKKIHSPLQYPRVLHLG---------DVKYDICAVMIHEGPNADCGHYYDLIKHPGTRQW 357
Query: 62 WEFDDEHV 69
+ ++DE V
Sbjct: 358 FTYNDEVV 365
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 649 LEASESMFEPDRRASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQR 708
A+ S+ P+R A+ R + + K+++ +I+QLK+ I++ G + +Q+++ +R
Sbjct: 1144 FNATPSLIRPERHATTRRAVAKCSMVFKMTSLNTIHQLKIKIYQKTGQLPNDQLIYMKER 1203
Query: 709 IIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLT 765
+++ + TL + + P + + + I + +D + +E GF T L+
Sbjct: 1204 LLN-DSDTLEEARVDPQELIETPLTL------IVQQPTDIPTEPRQLERGFADTALS 1253
>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|395843772|ref|XP_003794647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Otolemur garnettii]
Length = 354
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 257 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 314
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISK 340
>gi|395542774|ref|XP_003773300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sarcophilus
harrisii]
Length = 373
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 276 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 333
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 334 FDDDIVEKIDAQAIEEFYGLTSDISK 359
>gi|312079795|ref|XP_003142327.1| hypothetical protein LOAG_06743 [Loa loa]
Length = 1171
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI SP +P L++ D+ YD+ AV+IH+G + GHY LIK T QW
Sbjct: 307 KKKIHSPLQYPRVLHLG---------DVKYDICAVMIHEGPNADCGHYYDLIKHPGTRQW 357
Query: 62 WEFDDEHV 69
+ ++DE V
Sbjct: 358 FTYNDEVV 365
>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Otolemur garnettii]
Length = 366
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L++Q L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 592 KINSHVSFPLEGLDLQPFLAKECVSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 649
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 650 WYEFDDQYVTEV 661
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+ V L+ PSL + ++IS +WL
Sbjct: 658 VTEVHETVVQNAEAYVLFYRKSSE-EAVMERQHVVS--LATTKEPSLLQ--FYISREWLN 712
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 713 KFNTFAEPGPITNHTFLCAHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLY 772
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 773 VCSACQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 829
Query: 354 NLDAPSEADGGPTTSIR 370
+ + P D I+
Sbjct: 830 DNEPPGPIDNSKIALIK 846
>gi|388511257|gb|AFK43690.1| unknown [Medicago truncatula]
Length = 480
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+Q+ +YDL AVL HKG + +SGHY+ +K EN G+W EFDD++
Sbjct: 405 TQMTGVYDLVAVLTHKGRSADSGHYVGWVKQEN-GKWIEFDDDN 447
>gi|66818975|ref|XP_643147.1| hypothetical protein DDB_G0276443 [Dictyostelium discoideum AX4]
gi|60471212|gb|EAL69175.1| hypothetical protein DDB_G0276443 [Dictyostelium discoideum AX4]
Length = 1306
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 4 KITSPFCFPGELNMQRRLSEPS--QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP L++ R L E + L IY L +VLIH G +++GHY A IK + G+W
Sbjct: 507 KINDKYKFPDTLDLNRYLDEGADKSLSYIYTLQSVLIHSGD-LHNGHYYAFIK--SNGEW 563
Query: 62 WEFDDEHVS 70
++FDD+ V+
Sbjct: 564 FKFDDDEVT 572
>gi|334331351|ref|XP_001371592.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Monodelphis domestica]
Length = 379
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 282 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 339
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 340 FDDDIVEKIDAQAIEEFYGLTSDISK 365
>gi|440898709|gb|ELR50140.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Bos grunniens
mutus]
Length = 371
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 274 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 331
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 332 FDDDIVEKIDAQAIEEFYGLTSDISK 357
>gi|221042968|dbj|BAH13161.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 257 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 314
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISK 340
>gi|29243896|ref|NP_808229.1| ubiquitin carboxyl-terminal hydrolase 46 [Mus musculus]
gi|31377709|ref|NP_073743.2| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Homo sapiens]
gi|197097492|ref|NP_001127337.1| ubiquitin carboxyl-terminal hydrolase 46 [Pongo abelii]
gi|329112531|ref|NP_001179373.2| ubiquitin carboxyl-terminal hydrolase 46 [Bos taurus]
gi|388454621|ref|NP_001253892.1| ubiquitin carboxyl-terminal hydrolase 46 [Macaca mulatta]
gi|114594803|ref|XP_517296.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Pan
troglodytes]
gi|332238466|ref|XP_003268419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Nomascus leucogenys]
gi|402869825|ref|XP_003898946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Papio anubis]
gi|426344309|ref|XP_004038716.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Gorilla gorilla gorilla]
gi|49065850|sp|P62068.1|UBP46_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|49065851|sp|P62069.1|UBP46_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|75055084|sp|Q5RBQ4.1|UBP46_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|10436670|dbj|BAB14881.1| unnamed protein product [Homo sapiens]
gi|22902225|gb|AAH37574.1| Ubiquitin specific peptidase 46 [Homo sapiens]
gi|25059082|gb|AAH39916.1| Ubiquitin specific peptidase 46 [Mus musculus]
gi|55728112|emb|CAH90806.1| hypothetical protein [Pongo abelii]
gi|74208300|dbj|BAE26353.1| unnamed protein product [Mus musculus]
gi|119625840|gb|EAX05435.1| ubiquitin specific peptidase 46, isoform CRA_b [Homo sapiens]
gi|124000509|gb|ABM87763.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|157928604|gb|ABW03598.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|319433467|gb|ADV57651.1| ubiquitin specific protease 46 [Homo sapiens]
gi|380783867|gb|AFE63809.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|384943090|gb|AFI35150.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|410210120|gb|JAA02279.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410254346|gb|JAA15140.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410289942|gb|JAA23571.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410342789|gb|JAA40341.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|417399762|gb|JAA46868.1| Putative ubiquitin carboxyl-terminal hydrolase 46 [Desmodus
rotundus]
Length = 366
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
Length = 360
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 263 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 320
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 321 FDDDIVEKIDAQAIEEFYGLTSDISK 346
>gi|119625839|gb|EAX05434.1| ubiquitin specific peptidase 46, isoform CRA_a [Homo sapiens]
Length = 250
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 153 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 210
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 211 FDDDIVEKIDAQAIEEFYGLTSDISK 236
>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
caballus]
Length = 360
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 263 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 320
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 321 FDDDIVEKIDAQAIEEFYGLTSDISK 346
>gi|390460899|ref|XP_002745872.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Callithrix
jacchus]
Length = 359
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 262 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 319
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISK 345
>gi|344288367|ref|XP_003415922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Loxodonta
africana]
Length = 359
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 262 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 319
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISK 345
>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
Length = 382
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 285 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 342
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 343 FDDDIVEKIDAQAIEEFYGLTSDISK 368
>gi|300797766|ref|NP_001178525.1| ubiquitin carboxyl-terminal hydrolase 46 [Rattus norvegicus]
gi|319433465|gb|ADV57650.1| ubiquitin specific protease 46 [Rattus norvegicus]
Length = 366
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|358349208|ref|XP_003638631.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355504566|gb|AES85769.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 280
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+Q+ +YDL AVL HKG + +SGHY+ +K EN G+W EFDD++
Sbjct: 205 TQMTGVYDLVAVLTHKGRSADSGHYVGWVKQEN-GKWIEFDDDN 247
>gi|432111639|gb|ELK34741.1| Ubiquitin carboxyl-terminal hydrolase 46 [Myotis davidii]
Length = 370
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 273 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
Length = 384
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 287 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 344
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 345 FDDDIVEKIDAQAIEEFYGLTSDISK 370
>gi|224128558|ref|XP_002329033.1| predicted protein [Populus trichocarpa]
gi|222839704|gb|EEE78027.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
S L IYDL AVL HKG + +SGHY+A +K E +G+W EFDD++
Sbjct: 411 SHLTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEFDDDN 453
>gi|348690171|gb|EGZ29985.1| hypothetical protein PHYSODRAFT_470080 [Phytophthora sojae]
Length = 510
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLG----HHPFGEGSSSSG 85
+Y+L +VLIH G+A+ GHY A IK +TG+W+ F+D +VS + FG G+S SG
Sbjct: 409 VYELYSVLIHSGSALG-GHYYAYIKSLDTGKWYNFNDSNVSEISDTELQTAFG-GASGSG 466
Query: 86 SKVVRSEPVVCQPVSERVEGANENHVDVHLPSS 118
+ S + R+ A++N V+V LP S
Sbjct: 467 YSMRYS--TCAYMLLYRLVNADKN-VNVILPES 496
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 46/313 (14%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 599 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 657
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+EFDD++V+ + + V +E V E E V L +
Sbjct: 658 YEFDDQYVTEVHE-----------TVVQSAEAYVLFYRKSSEEAVQERQQVVSLAA---M 703
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD--IFLPSHL 179
++ RF + ++ +N E + ++ I + DD + LP ++
Sbjct: 704 REPSLLRFYVSREWLNKFNTF--AEPGPITNHTFLCSHGGIPPHKYHYIDDLVVILPQNV 761
Query: 180 GKDI-------KELNRSYLDGCEQFKLRKNRELDCISERKQ-EVRSLLSEAPVPSLEEP- 230
+ + +N Y+ Q E++ +++R+Q E+ + + EE
Sbjct: 762 WEHLYNRFGGGPAVNHLYVCSICQV------EIEALAKRRQIEIDTFIKLNKAFQAEESP 815
Query: 231 --FYWISSDWLRQW------ADKIFPSTLDNTSIQCLHGK--VPESKIGSMKRISSKAWN 280
Y IS W R+W D P +DN+ I + G + + +IS + W
Sbjct: 816 SVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHIQLKQGADYGQISEETWV 875
Query: 281 KFFFKYNGGPALT 293
Y GGP +
Sbjct: 876 YLNNLYGGGPEVA 888
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 28/228 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 665 VTEVHETVVQSAEAYVLFYRKSSE-EAVQERQQVVS--LAAMREPSLLR--FYVSREWLN 719
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 720 KFNTFAEPGPITNHTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 779
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ + D++ K+ + + Y +S W ++W
Sbjct: 780 VCSICQVEIEALAKRRQIEIDTFIKLNKAFQAEESPSV-------IYCISMQWFREWEAF 832
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ G + GA + E W+++
Sbjct: 833 VKGKDNEPPGPIDNSRIAQVK---GSGHIQLKQGADYGQISEETWVYL 877
>gi|170584547|ref|XP_001897060.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158595545|gb|EDP34089.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 1258
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI SP +P L + D+ YD+ AV+IH+G + GHY LIK T QW
Sbjct: 307 KKKIHSPLQYPRVLQLG---------DVKYDICAVMIHEGPNADCGHYYDLIKHPGTRQW 357
Query: 62 WEFDDEHV 69
+ ++DE V
Sbjct: 358 FTYNDEVV 365
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+KIT +P L++ +S P ++D Y L +++H G +SGHY + ++ ++G+W
Sbjct: 354 RKITGQLRYPETLHLGPYMSNP-KVDPSYRLYGIILHSGGGPHSGHYTSYVR-SSSGKWH 411
Query: 63 EFDDEHVSNLGHHPFGE 79
+ +D++VS+L H P +
Sbjct: 412 DMNDDYVSSLSHPPLSD 428
>gi|410957766|ref|XP_003985495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Felis catus]
Length = 369
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|345779600|ref|XP_849650.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46 isoform 2 [Canis lupus familiaris]
Length = 389
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 292 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 349
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 350 FDDDIVEKIDAQAIEEFYGLTSDISK 375
>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + +SGHY++ +K + GQW++
Sbjct: 290 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHSGHYLSYVKAQE-GQWYK 348
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 349 MDDAEVTASG 358
>gi|359322364|ref|XP_003639838.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 533
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SG Y +K N GQW +
Sbjct: 291 KMTKEMQYPECLDMQHSLSEQRAGPLVYVLYAVLVHAGWSCHSGRYFCFVKAGN-GQWHK 349
Query: 64 FDDEHVS 70
DD VS
Sbjct: 350 MDDAKVS 356
>gi|335293447|ref|XP_003129021.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sus scrofa]
Length = 376
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 279 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 336
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 337 FDDDIVEKIDAQAIEEFYGLTSDISK 362
>gi|281352654|gb|EFB28238.1| hypothetical protein PANDA_008082 [Ailuropoda melanoleuca]
gi|351697652|gb|EHB00571.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Heterocephalus
glaber]
Length = 354
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 257 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 314
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISK 340
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 337 KITKDVGYPEFLNIRPYMSQNSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 395
Query: 64 FDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVV 95
DD V HP SSG V+ + V
Sbjct: 396 MDDSLV-----HP------SSGKAVLSQQAYV 416
>gi|197116355|ref|NP_001127695.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Homo sapiens]
gi|114594805|ref|XP_001148401.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Pan
troglodytes]
gi|301768068|ref|XP_002919453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Ailuropoda melanoleuca]
gi|332238468|ref|XP_003268420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Nomascus leucogenys]
gi|397469742|ref|XP_003806502.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Pan paniscus]
gi|402869827|ref|XP_003898947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Papio anubis]
gi|403284661|ref|XP_003933679.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Saimiri
boliviensis boliviensis]
gi|426344311|ref|XP_004038717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Gorilla gorilla gorilla]
gi|221044064|dbj|BAH13709.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 262 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 319
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISK 345
>gi|348571693|ref|XP_003471630.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Cavia
porcellus]
Length = 409
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 312 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 369
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 370 FDDDIVEKIDAQAIEEFYGLTSDISK 395
>gi|312373083|gb|EFR20906.1| hypothetical protein AND_18322 [Anopheles darlingi]
Length = 1429
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 12 PGELNMQRRLSEPS-QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
P ++ RR EP +D YDL AV H+G + +GHY A K+ GQW+ FDD+ V+
Sbjct: 645 PATNSLNRRGGEPPIVMDNRYDLYAVCYHQGDTLETGHYTAACKNPYDGQWYRFDDQRVT 704
Query: 71 NLG 73
++
Sbjct: 705 HVA 707
>gi|426358871|ref|XP_004046713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 355
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + +SGHY++ +K + GQW++
Sbjct: 115 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHSGHYLSYVKAQE-GQWYK 173
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 174 MDDAEVTASG 183
>gi|150951445|ref|XP_001387762.2| deubiquitinating enzyme [Scheffersomyces stipitis CBS 6054]
gi|149388600|gb|EAZ63739.2| deubiquitinating enzyme, partial [Scheffersomyces stipitis CBS
6054]
Length = 481
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 1 MKKKITSPF--CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE-- 56
+K K + F P N++ PS +Y+LSAV+ H G++ +SGHY + IKD+
Sbjct: 381 IKSKFSDSFKSILPEGFNVEETSENPSS---VYELSAVITHAGSSADSGHYQSFIKDDSD 437
Query: 57 -NTGQWWEFDDEHVSNLGHHPF----GEGSSSSG 85
+ +WW+F+D+ VS++ G G S S
Sbjct: 438 LDGERWWKFNDDKVSSVNKEKIESLAGGGESDSA 471
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+M++ LS+ L Y+L AVL+H G SGHY IK N GQW++
Sbjct: 254 KLAKEVQYPEHLDMRQYLSQQDAGPLEYELYAVLVHAGGTCRSGHYFCYIKAGN-GQWFK 312
Query: 64 FDDEHVS 70
DD V+
Sbjct: 313 MDDAKVT 319
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ+ +S+ + L+Y L AVL+H G + ++GHY IK N GQW++ DD V+
Sbjct: 297 YPEYLDMQQYMSQQNSGPLLYVLYAVLVHAGWSCHNGHYFCYIKAGN-GQWYKMDDAKVT 355
>gi|123475936|ref|XP_001321143.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121903963|gb|EAY08920.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1015
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ S F FP EL++ + + D +Y+L+ VL+H G +VN GHY A +K +W+
Sbjct: 334 KLNSRFEFPKELDLSKYIE-----DSLYELTGVLVHSG-SVNGGHYYAFLKPTEEPKWYR 387
Query: 64 FDDEHVS 70
FDD V+
Sbjct: 388 FDDSLVT 394
>gi|150865635|ref|XP_001384943.2| hypothetical protein PICST_32361 [Scheffersomyces stipitis CBS
6054]
gi|149386891|gb|ABN66914.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 565
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 4 KITSPFCFPGELNMQR-------RLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
KI +P P LNM R SE D I++L A++ H G +VN+GHYI L KD
Sbjct: 472 KIETPIKIPLYLNMTRYSIGHDPHDSEQIDEDKIFELFALVCHIG-SVNTGHYIVLTKDG 530
Query: 57 NTGQWWEFDDEHVS 70
N GQW++FDD VS
Sbjct: 531 N-GQWFKFDDSVVS 543
>gi|348509763|ref|XP_003442416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Oreochromis
niloticus]
Length = 1292
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 43/134 (32%)
Query: 20 RLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH----H 75
R+ +P L L ++L +V++H G+A GHY A IK + GQW+ F+D+HVS +
Sbjct: 387 RVLKPKSL-LTFELFSVMVHSGSAAG-GHYYACIKSFSDGQWYSFNDQHVSKITQDDIRK 444
Query: 76 PFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAY 135
+G S S G YY+G+ +S +AY
Sbjct: 445 TYGGSSGSRG----------------------------------YYSGAFA---SSTNAY 467
Query: 136 MLMYNLRRDKEDSK 149
ML+Y L+ ++K
Sbjct: 468 MLIYRLKDPSRNAK 481
>gi|355687430|gb|EHH26014.1| hypothetical protein EGK_15892 [Macaca mulatta]
Length = 401
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 304 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 361
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 362 FDDDIVEKIDAQAIEEFYGLTSDISK 387
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 340 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 398
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 399 MNDSSVHSSNI 409
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 336 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 394
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 395 MNDSLVHSSNI 405
>gi|431898903|gb|ELK07273.1| Ubiquitin carboxyl-terminal hydrolase 20 [Pteropus alecto]
Length = 889
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI+S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 597 KISSHVSFPLEGLDLRPFLAKECTSQIS-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 654
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 655 WYEFDDQYVTKV 666
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ +++ + + E + L RK+ E + + ER Q+V SL ++ L +++S +WL
Sbjct: 663 VTKVHETVVQSAEAYVLFYRKSSE-EAVRER-QQVVSLAAKRETSLLR---FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNYTFLCSHGGIPPNKYHYIDDLVVILPQDVWEYLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLID 304
C C ++
Sbjct: 778 VCSICQVE 785
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|363740969|ref|XP_424101.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36, partial
[Gallus gallus]
Length = 884
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 204 KITKDVGYPEFLNIRPYMSQNSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 262
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 263 MNDSLVHCSNI 273
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 20/111 (18%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKVSN-GQWYQ 396
Query: 64 FDDE--HVSNL-----------------GHHPFGEGSSSSGSKVVRSEPVV 95
+D H+SN+ G EGS S + +RS P V
Sbjct: 397 MNDSLVHLSNIKVVLNQQAYVLFYLRIPGSKKSPEGSISRTASTLRSHPSV 447
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSMVHSSNI 407
>gi|347970708|ref|XP_310382.7| AGAP003821-PA [Anopheles gambiae str. PEST]
gi|333466796|gb|EAA05977.6| AGAP003821-PA [Anopheles gambiae str. PEST]
Length = 1429
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFP-GELNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+SP FP L+M+ L + + ++ YDL AV+ H GT V GHY + K + TG+W
Sbjct: 645 KISSPVHFPLYGLDMRPYLHKDCRSEVTSYDLCAVICHHGT-VGGGHYTSFAKHDPTGKW 703
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 704 FEFDDQLVTQV 714
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ ++ ++ CE + L + ++ + + +LL+ S + +++S +WL ++
Sbjct: 711 VTQVTPEHVQSCEAYVLFYRKNNAKMATVRAQASNLLAMQEHAS--DIRFYVSRNWLHRF 768
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKRI----SSKAWNKFFFKYNGGPALTNDDYC 298
P +DN ++ C HG P +K ++ W+ + K+ GGP + C
Sbjct: 769 NTFAEPGPIDNWTLLCPHGAFPPNKASHFSKLVVPFPQALWDFLYKKFGGGPVCNHLSTC 828
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
C A T+ Y ++ DD Y +S +W +QW
Sbjct: 829 NICK-KAAETLSRRQHY--ELETFTAFNDDFQFNDTPTTIYAISMAWFRQW 876
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 339 YYVSKSWLQQWTRRKNLDAPSEADGGPTT--SIRCPHGQLMPEKAGGAKRLLV--PEILW 394
+YVS++WL ++ + A+ GP ++ CPHG P KA +L+V P+ LW
Sbjct: 758 FYVSRNWLHRFN--------TFAEPGPIDNWTLLCPHGAFPPNKASHFSKLVVPFPQALW 809
Query: 395 LFIYE 399
F+Y+
Sbjct: 810 DFLYK 814
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 339 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 397
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 398 MNDSLVHSSNI 408
>gi|355749411|gb|EHH53810.1| hypothetical protein EGM_14513 [Macaca fascicularis]
Length = 401
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 304 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 361
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 362 FDDDIVEKIDAQAIEEFYGLTSDISK 387
>gi|123392259|ref|XP_001300216.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121881219|gb|EAX87286.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 978
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
K+ F FP EL+M+ + S+ D +YDL VLIH G A N+GHY A++K E G W+
Sbjct: 355 KVNDRFEFPDELDMKEFMDPESEDKDTVYDLFGVLIHIGFA-NAGHYEAMMKIE--GNWY 411
Query: 63 EFDDEHVSNL 72
F+D+ V+ +
Sbjct: 412 LFNDDEVTKV 421
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 375 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 433
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 434 MNDSLVHSSNV 444
>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
Length = 366
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + E LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSGEAINLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|345310501|ref|XP_001515746.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46-like [Ornithorhynchus anatinus]
Length = 347
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 250 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 307
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 308 FDDDIVEKIDAQAIEEFYGLTSDISK 333
>gi|410981888|ref|XP_004001484.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36-like, partial [Felis catus]
Length = 872
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 62 KITKDVGYPEFLNLRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 120
Query: 64 FDDEHV 69
+D V
Sbjct: 121 MNDSSV 126
>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
Length = 359
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 262 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 319
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 320 FDDDIVEKI 328
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L++Q LS+P+ L Y L AVL+H G +SGHY +K + G+W++
Sbjct: 263 KLNRVVSYPEYLDLQPYLSQPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASH-GKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDSKVT 328
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSMVHSSNI 407
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L++Q LS+P+ L Y L AVL+H G +SGHY +K + G+W++
Sbjct: 263 KLNRVVSYPEYLDLQPYLSQPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASH-GKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDSKVT 328
>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
Group]
gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
sativa Japonica Group]
gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + ++ DL Y L AVL+H G+ N GHYI+L+K N W
Sbjct: 268 KKLSYRVVFPLELKL---INTVDNSDLEYSLFAVLVHVGSGPNHGHYISLVKSHN--HWL 322
Query: 63 EFDDEHV----SNLGHHPFGEGSSSSGS 86
FDDE+V ++ FG SG+
Sbjct: 323 FFDDENVEMTDESMVQTFFGSAQEFSGN 350
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSMVHSSNI 407
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|148705918|gb|EDL37865.1| ubiquitin specific peptidase 46, isoform CRA_a [Mus musculus]
Length = 127
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 41 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 98
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 99 FDDDIV 104
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHPGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSMVHSSNI 407
>gi|354501689|ref|XP_003512921.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Cricetulus griseus]
Length = 459
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 362 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 419
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 420 FDDDIVEKI 428
>gi|170084517|ref|XP_001873482.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651034|gb|EDR15274.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 368
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP +L + + + D +Y+L AV++H G + GHYI++IK G W
Sbjct: 276 KLAYRVAFPMDLRLFNTVDDMDDSDRLYNLFAVVVHIGNGPHHGHYISIIKTH--GSWLV 333
Query: 64 FDDEHVSNLGHH--PFGEGSSSSGSKVV 89
FDD++VS + P G S+SGS V
Sbjct: 334 FDDDNVSTIPESDIPKYFGDSNSGSAYV 361
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L++Q LS+P+ L Y L AVL+H G +SGHY +K + G+W++
Sbjct: 591 KLNRVVSYPEYLDLQPYLSQPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASH-GKWYK 649
Query: 64 FDDEHVS 70
DD V+
Sbjct: 650 MDDSKVT 656
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 375 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 433
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 434 MNDSLVHSSNV 444
>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
latipes]
Length = 1055
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY IK N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYIKASN-GQWYQ 396
Query: 64 FDDEHV 69
+D V
Sbjct: 397 MNDSMV 402
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LNM+ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 337 KITKDVGYPEFLNMRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 395
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 396 MNDSLVHSSNV 406
>gi|159476648|ref|XP_001696423.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282648|gb|EDP08400.1| predicted protein [Chlamydomonas reinhardtii]
Length = 350
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 3 KKITSPFCFPGELNMQRRLSE-PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+K+ FP EL + S+ P+ D +Y L+AV++H G+ + GHY++LIK + QW
Sbjct: 250 RKLMYRVVFPMELKLANTTSDDPAAPDTLYSLTAVVVHVGSGPHHGHYVSLIK--SGSQW 307
Query: 62 WEFDDEHV 69
FDDE V
Sbjct: 308 MFFDDETV 315
>gi|392354806|ref|XP_003751856.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 48-like [Rattus
norvegicus]
Length = 283
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 181 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 240
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 241 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 280
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L++Q LS+P+ L Y L AVL+H G +SGHY +K + G+W++
Sbjct: 308 KLNRVVSYPEYLDLQPYLSQPTAGPLPYALYAVLVHDGVTCSSGHYFCYVKASH-GKWYK 366
Query: 64 FDDEHVS 70
DD V+
Sbjct: 367 MDDSKVT 373
>gi|444519192|gb|ELV12645.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Tupaia
chinensis]
Length = 295
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 229 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 286
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 287 FDDDIV 292
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 597 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 655
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 656 YEFDDQYVTEV 666
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 663 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 778 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 834
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D R G + GA + E W+++
Sbjct: 835 DNEPPGPIDNSRIAQAR---GSGHIQLKQGADYGQISEETWVYL 875
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D IYDL AV+IH G+ N GHYI ++K G W
Sbjct: 250 KLSYRVVFPLELRLFNTSDDAVNADKIYDLVAVVIHCGSGPNRGHYITIVKSH--GFWLL 307
Query: 64 FDDEHVSNLGHHP 76
FDD+ V + H
Sbjct: 308 FDDDIVEKIDAHA 320
>gi|157427794|ref|NP_001098803.1| ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
gi|281312476|sp|A7Z056.1|UBP20_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|157279133|gb|AAI53255.1| USP20 protein [Bos taurus]
gi|296482025|tpg|DAA24140.1| TPA: ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
Length = 912
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 596 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 654
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 655 YEFDDQYVTEV 665
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 662 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 717 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYSRFGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 777 VCSICQVE---IEALAKRRRVEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 833
Query: 354 NLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ H QL P GA + E W+++
Sbjct: 834 DNEPPGPIDNSRIAQVKGSGHIQLKP----GADYGQISEETWVYL 874
>gi|344251694|gb|EGW07798.1| Ubiquitin carboxyl-terminal hydrolase 46 [Cricetulus griseus]
Length = 333
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 229 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 286
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 287 FDDDIV 292
>gi|221041392|dbj|BAH12373.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 153 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 210
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 211 FDDDIV 216
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 586 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 644
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 645 YEFDDQYVTEV 655
>gi|448117421|ref|XP_004203250.1| Piso0_000853 [Millerozyma farinosa CBS 7064]
gi|359384118|emb|CCE78822.1| Piso0_000853 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 1 MKKKITSPF--CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
+K K+ F P +++ PS +YDLSAV+ H G++ +SGHY A ++DE+
Sbjct: 385 IKSKLRDDFKKILPDGVDIDTTTENPSS---VYDLSAVITHSGSSADSGHYQAFVRDEDD 441
Query: 59 ---GQWWEFDDEHVSNLGHHPF----GEGSSSSG 85
+WW F+D+ V+++ G G S S
Sbjct: 442 LDGERWWRFNDDKVTSISRERIETLAGGGESDSA 475
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 320 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 378
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 379 MNDSLVHSSNV 389
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 124/313 (39%), Gaps = 46/313 (14%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 576 KINSHVSFPLEGLDLRPFLAKECVSQI-TTYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 633
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+EFDD++V+ + + V +E V E E V L S +
Sbjct: 634 WYEFDDQYVTEVHE-----------TVVQNAEAYVLFYRKSSEEAVRERQKVVSLASMKE 682
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD--IFLPSH 178
+ ++ +F + ++ +N E + ++ I + DD + LP +
Sbjct: 683 H---SLLQFYVSREWLNKFNTF--AEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQN 737
Query: 179 L----------GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLE 228
+ G + L + E L K R ++ + K L E+P
Sbjct: 738 VWEYLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFLAEESP----- 792
Query: 229 EPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH--GKVPESKIGSMKRISSKAWN 280
Y IS W R+W D P +DN+ I G + + +IS + W
Sbjct: 793 SVIYCISMQWFREWEAFVRGKDNEPPGPIDNSKIALTKAGGHMHVKQGTDYGQISEETWI 852
Query: 281 KFFFKYNGGPALT 293
Y GGP +
Sbjct: 853 YLSTLYGGGPEIA 865
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL S L+ +++S +WL ++
Sbjct: 642 VTEVHETVVQNAEAYVLFYRKSSEEAVRERQKVVSLASMKEHSLLQ---FYVSREWLNKF 698
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N + C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 699 NTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLYVC 758
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRKNL 355
C ++ A R + L L+ + Y +S W ++W R K+
Sbjct: 759 SICQVE---IEALAKRRRIEIDTFIKLNKAFLAEESPSVIYCISMQWFREWEAFVRGKDN 815
Query: 356 DAPSEAD 362
+ P D
Sbjct: 816 EPPGPID 822
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S + Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPVTYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|395844586|ref|XP_003795039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Otolemur
garnettii]
Length = 924
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 608 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 666
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 667 YEFDDQYVTEV 677
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 22/225 (9%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 674 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 728
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 729 KFNTFAEPGPITNQTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 788
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 789 VCSICQVE---IEALARRRRTEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 845
Query: 354 NLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D +R H QL GA + E W ++
Sbjct: 846 DSEPPGPIDNSRIAQVRGSGHVQLR----QGADYGQISEETWAYL 886
>gi|350579707|ref|XP_001929239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Sus
scrofa]
Length = 914
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETLVQNAEAYVLFYRKSSE-EALRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W+++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHIQLKQGADYGQISEETWVYL 876
>gi|426201368|gb|EKV51291.1| hypothetical protein AGABI2DRAFT_53794, partial [Agaricus bisporus
var. bisporus H97]
Length = 266
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T FP EL + + + D +Y+L A+++H G + GHYI+++K + G W
Sbjct: 176 KLTYRVTFPFELRLFNTVDDLENADRLYELFAIVVHLGNGPHHGHYISIVK--SVGSWLV 233
Query: 64 FDDEHVSNLGHHPFGE-------GSSSSGSKVV 89
FDD++V +P E G S+SGS V
Sbjct: 234 FDDDNV-----YPIPEVEIPKYFGDSNSGSAYV 261
>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK+T FP EL + + DL Y L AVL+H G+ N GHYI+++K N W
Sbjct: 268 KKLTYRVVFPLELKLMNTVDNS---DLEYSLFAVLVHVGSGPNHGHYISVVKSHN--HWL 322
Query: 63 EFDDEHV----SNLGHHPFGEGSSSSGS 86
FDDE V ++ FG SG+
Sbjct: 323 FFDDETVEMTDESMVQTFFGSAQEFSGN 350
>gi|432116599|gb|ELK37392.1| Ubiquitin carboxyl-terminal hydrolase 20 [Myotis davidii]
Length = 808
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 492 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 550
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 551 YEFDDQYVTEV 561
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 22/226 (9%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 558 VTEVHETVVQSAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 612
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 613 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYGRFGGGPAVNHLY 672
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 673 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 729
Query: 354 NLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ + P D ++ H QL P GA + E W +++
Sbjct: 730 DNEPPGPIDNSRIAQVKGSGHIQLKP----GADYGQISEETWAYLH 771
>gi|449447838|ref|XP_004141674.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Cucumis
sativus]
gi|449480596|ref|XP_004155940.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Cucumis
sativus]
Length = 483
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+Q+ IYDL AVL HKG + +SGHY+A +K E +G+W E+DD++
Sbjct: 408 TQMTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDDN 450
>gi|225442341|ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
gi|297743111|emb|CBI35978.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+ L IYDL AVL HKG + +SGHY+A +K E +G+W EFDD++
Sbjct: 404 THLTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEFDDDN 446
>gi|148230064|ref|NP_001090710.1| ubiquitin carboxyl-terminal hydrolase 47 [Xenopus (Silurana)
tropicalis]
gi|332321763|sp|A1A5G2.1|UBP47_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 47; AltName:
Full=Deubiquitinating enzyme 47; AltName: Full=Ubiquitin
thioesterase 47; AltName:
Full=Ubiquitin-specific-processing protease 47
gi|118763560|gb|AAI28637.1| LOC100036690 protein [Xenopus (Silurana) tropicalis]
Length = 1354
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Query: 9 FCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
C N+++ S+ + +Y+L +V++H G+A GHY A IK GQW+ F+D+H
Sbjct: 450 ICLETNSNIEKLNKSVSEKNSLYELFSVMVHSGSAAG-GHYYACIKSFADGQWYSFNDQH 508
Query: 69 VSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVER 128
VS + + + + G+ N YY+ +
Sbjct: 509 VSRITQ----------------------EDIKKTYGGSTGNR--------GYYSSAFA-- 536
Query: 129 FTSNDAYMLMYNLRRDKEDSKRKDVV 154
+S +AYMLMY L+ ++K + +
Sbjct: 537 -SSTNAYMLMYRLKNPARNAKFPEAI 561
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 336 KITKEVGYPEFLNLRPYMSQRNGNPVMYALYAVLVHSGYSCHAGHYYCYVKASN-GQWFQ 394
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 395 MNDSLVHASNI 405
>gi|115458702|ref|NP_001052951.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|113564522|dbj|BAF14865.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|215695550|dbj|BAG90741.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL +LS +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMEL----KLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|428167496|gb|EKX36454.1| hypothetical protein GUITHDRAFT_165733 [Guillardia theta CCMP2712]
Length = 1003
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQL--DLIYDLSAVLIHKGTAVNSGHYIALIK---DENT 58
KI+ +P L+M+ L+ P + + IYDL VL+H+G+++ GHY++ +K
Sbjct: 163 KISRSISYPAVLDMRPYLTSPERHFNNSIYDLYGVLVHEGSSLQYGHYLSYVKHACKHKE 222
Query: 59 GQWWEFDDEHV 69
G W++ DD H
Sbjct: 223 GSWYQMDDSHT 233
>gi|21740732|emb|CAD40853.1| OSJNBa0086B14.26 [Oryza sativa Japonica Group]
gi|116310175|emb|CAH67188.1| H0815C01.9 [Oryza sativa Indica Group]
gi|125548525|gb|EAY94347.1| hypothetical protein OsI_16114 [Oryza sativa Indica Group]
gi|125590577|gb|EAZ30927.1| hypothetical protein OsJ_15007 [Oryza sativa Japonica Group]
Length = 365
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL +LS +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 268 KKLSYRVVFPMEL----KLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 321
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 322 FFDDENV 328
>gi|344256101|gb|EGW12205.1| Ubiquitin carboxyl-terminal hydrolase 48 [Cricetulus griseus]
Length = 528
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 426 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 485
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 486 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 525
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 58/251 (23%)
Query: 271 MKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVL 330
MKRIS A + F+ +Y GGP LT C C+++ + + + K++ L +
Sbjct: 1 MKRISEYAADIFYSRYGGGPRLTVKALCKDCVVERCRVLRLKNQLNEDYKTVNNLLKAAM 60
Query: 331 SGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTS---------------------- 368
G + ++V KS L+ W R+ L+ E DG S
Sbjct: 61 KG---DDGFWVGKSSLRSW-RQLALEQLDEQDGEAEQSNGKINGTPFNKDESKEEKKEEE 116
Query: 369 --------IRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSE 420
I CPHG L +R LV + W + + K FP E
Sbjct: 117 DELNFNEDILCPHGGL---SISENERRLVSQEAWNKLRQYFPKA--------PEFPSYKE 165
Query: 421 ECPEC---------SDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLP 471
C +C ++AL ++ E L + +N L+ + P DC Y++
Sbjct: 166 CCSQCKILEREGEENEALHKMIANEQKTSLPNLFQDKNRPCLS---NWPEDTDC-LYIVS 221
Query: 472 STWLTKWRNYI 482
+L +WR ++
Sbjct: 222 HFFLDEWRKFV 232
>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
Length = 363
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + S D +YDL AV+IH GT N GHYI+++K G W
Sbjct: 266 KLSYRVVFPLELRLFNTSDDASNPDRLYDLIAVVIHCGTGPNRGHYISIVKSH--GLWLL 323
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 324 FDDDIVDKI 332
>gi|296191006|ref|XP_002743440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Callithrix
jacchus]
Length = 1058
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 741 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 799
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 800 YEFDDQYVTEV 810
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 807 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 861
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 862 KFNTFAEPGPITNQTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 921
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 922 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 978
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 979 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 1019
>gi|50510751|dbj|BAD32361.1| mKIAA1003 protein [Mus musculus]
Length = 961
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 645 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 703
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 704 YEFDDQYVTEV 714
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 711 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 765
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 766 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 825
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 826 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 878
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 879 VKGKDSEPPGPIDNSRIAQVK 899
>gi|23208620|gb|AAN15803.1|AF449715_1 pVHL-interacting deubiquitinating enzyme 2 [Mus musculus]
Length = 916
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 600 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 658
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 659 YEFDDQYVTEV 669
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 666 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 720
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 721 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 780
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 781 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 833
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 834 VKGKDSEPPGPIDNSRIAQVK 854
>gi|30794162|ref|NP_083122.1| ubiquitin carboxyl-terminal hydrolase 20 [Mus musculus]
gi|81876818|sp|Q8C6M1.1|UBP20_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2
gi|26344117|dbj|BAC35715.1| unnamed protein product [Mus musculus]
gi|50927529|gb|AAH79674.1| Ubiquitin specific peptidase 20 [Mus musculus]
gi|74201201|dbj|BAE37447.1| unnamed protein product [Mus musculus]
gi|148676553|gb|EDL08500.1| ubiquitin specific peptidase 20 [Mus musculus]
Length = 916
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 600 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 658
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 659 YEFDDQYVTEV 669
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 666 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 720
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 721 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 780
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 781 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 833
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 834 VKGKDSEPPGPIDNSRIAQVK 854
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ F EL++ +SE + +YDL AVL+H G +V+SGHY A ++ N G W
Sbjct: 259 KISKKIDFDLELDLGPFMSEAPLVPALYDLYAVLVHSGHSVHSGHYYAYVRAPN-GIWHI 317
Query: 64 FDDEHVSNLG 73
DD HV+ +
Sbjct: 318 CDDTHVAQVA 327
>gi|195054050|ref|XP_001993939.1| GH22304 [Drosophila grimshawi]
gi|193895809|gb|EDV94675.1| GH22304 [Drosophila grimshawi]
Length = 432
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 332 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 389
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 390 FDDDMVDKI 398
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHASNV 407
>gi|354505004|ref|XP_003514562.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus
griseus]
gi|344258150|gb|EGW14254.1| Ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus griseus]
Length = 915
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 599 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 657
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 658 YEFDDQYVTEV 668
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 28/228 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 665 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 719
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 720 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYGRFGGGPAVNHLY 779
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 780 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPGV-------IYCISMHWFREWEAF 832
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ GQ+ ++ GA + E W ++
Sbjct: 833 VKGKDSEPPGPIDNSRIAQVK-GSGQIQLKQ--GADYGQISEETWTYL 877
>gi|328767948|gb|EGF77996.1| hypothetical protein BATDEDRAFT_13604 [Batrachochytrium
dendrobatidis JAM81]
Length = 313
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + D +Y L V++H G++ SGHY+ALIK EN QW
Sbjct: 238 KLSYQVSFPLELRLFNTADGAENADRLYQLHGVVVHIGSSPQSGHYVALIKSEN--QWML 295
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 296 FDDDDV 301
>gi|197101307|ref|NP_001126647.1| ubiquitin carboxyl-terminal hydrolase 20 [Pongo abelii]
gi|75054783|sp|Q5R5Z6.1|UBP20_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|55732232|emb|CAH92820.1| hypothetical protein [Pongo abelii]
Length = 913
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 597 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 655
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 656 YEFDDQYVTEV 666
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 663 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 778 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGIIYCISMQWFREWEAFVKGK 834
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 835 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 875
>gi|407918169|gb|EKG11442.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 1121
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 14 ELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLG 73
++ R++ P +Y+ AV+ H G + SGHYIA++KD G WW+F+D V++
Sbjct: 1038 QIKTDERMTPP----YMYNAYAVMRHLGQTLTSGHYIAMLKDAARGCWWQFNDTSVTSFQ 1093
Query: 74 HHPFGEG 80
F G
Sbjct: 1094 PEAFRGG 1100
>gi|328875592|gb|EGG23956.1| hypothetical protein DFA_06094 [Dictyostelium fasciculatum]
Length = 2744
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 17/76 (22%)
Query: 9 FC-FPGELNMQRRLSEPSQL--------------DLIYDLSAVLIHKGTAVNSGHYIALI 53
FC FP +LNM E ++ D +YDLS +++H GTA +SGHYI L+
Sbjct: 2086 FCEFPLQLNMAPYTKEVVEMRENGSSEYFTMDQSDYVYDLSGIVLHAGTA-DSGHYITLV 2144
Query: 54 KDENTGQWWEFDDEHV 69
KD G W+E +D +V
Sbjct: 2145 KDV-YGNWFELNDTYV 2159
>gi|157821617|ref|NP_001101297.1| ubiquitin carboxyl-terminal hydrolase 20 [Rattus norvegicus]
gi|149039064|gb|EDL93284.1| ubiquitin specific protease 20 (predicted) [Rattus norvegicus]
Length = 915
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 599 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 657
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 658 YEFDDQYVTEV 668
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 665 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMQEPSLLR--FYVSREWLN 719
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 720 KFNTFAEPGPITNHTFLCPHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 779
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 780 VCSICQVE---IEALAKRRRVEIDTFIKLNKAFQAEESPGVIYCISMHWFREWEAFVKGK 836
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 837 DSEPPGPIDNSRIAQVK---GSGHIQLKQGADYGQISEETWTYL 877
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+++ +S+P+ +IY L AVL+H G + ++GHY IK N GQW++
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASN-GQWYQ 385
Query: 64 FDDEHVS 70
+D VS
Sbjct: 386 MNDSIVS 392
>gi|339247041|ref|XP_003375154.1| ubiquitin carboxyl- hydrolase 33 [Trichinella spiralis]
gi|316971533|gb|EFV55291.1| ubiquitin carboxyl- hydrolase 33 [Trichinella spiralis]
Length = 483
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 191 LDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPS-LEEPFYWISSDWLRQWADKIFPS 249
++ E + L + + I +++ +L + + S +E FY+IS +W+ + + P
Sbjct: 214 VENVEAYVLFYEKTSNTIGFVREQASALFENSHLLSPVETSFYYISMEWVIRLSTFAEPG 273
Query: 250 TLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDDYCMTC 301
++N S C HG V K+ SM ++S WN K+ GGP + +C+ C
Sbjct: 274 PVNNYSFLCRHGLVNVKKLSSMHNYCLKLSPSLWNYLRVKFGGGPVCRHLKHCIIC 329
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K G+
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVK-AGHGK 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K G+
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVK-AGHGK 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K G+
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVK-AGHGK 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T +P L+MQ LSE L+Y L AVL+H G + +SG Y +K N GQW +
Sbjct: 291 KMTKEMQYPECLDMQHSLSERRAGPLVYVLYAVLVHAGWSCHSGRYFCFVKAGN-GQWHK 349
Query: 64 FDDEHVS 70
DD +S
Sbjct: 350 MDDAKIS 356
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDEHVSN 71
+D V++
Sbjct: 397 MNDSLVNS 404
>gi|23262727|gb|AAL79676.1| pVHL-interacting deubiquitinating enzyme 2 [Homo sapiens]
gi|168278785|dbj|BAG11272.1| ubiquitin carboxyl-terminal hydrolase 20 [synthetic construct]
Length = 913
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 597 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 655
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 656 YEFDDQYVTEV 666
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 663 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 778 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 834
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 835 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 875
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + ++ DL Y L AVL+H G+ N GHYI+L+K N W
Sbjct: 268 KKLSYRVVFPLELKL---INTVDNSDLEYSLFAVLVHVGSGPNHGHYISLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 323 FFDDENV 329
>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Oreochromis niloticus]
Length = 369
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D I+ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQIK---GSGHVQLKQGADYGQISEETWTYL 876
>gi|397503609|ref|XP_003822413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1 [Pan
paniscus]
gi|397503611|ref|XP_003822414.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
paniscus]
Length = 914
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|332230223|ref|XP_003264287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Nomascus leucogenys]
gi|332230225|ref|XP_003264288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Nomascus leucogenys]
Length = 914
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 876
>gi|119608317|gb|EAW87911.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608318|gb|EAW87912.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608319|gb|EAW87913.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
Length = 916
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 600 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 658
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 659 YEFDDQYVTEV 669
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 666 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 720
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 721 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 780
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 781 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 837
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 838 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 878
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K + G
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARH-GA 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|40789018|dbj|BAA76847.2| KIAA1003 protein [Homo sapiens]
Length = 917
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 601 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 659
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 660 YEFDDQYVTEV 670
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 667 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 721
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 722 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 781
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 782 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 838
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 839 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 879
>gi|299756478|ref|XP_001829362.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
gi|298411695|gb|EAU92322.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
Length = 944
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T FP +L + + + D +Y L A+++H G + GHYI++IK N G W+
Sbjct: 331 KLTYRVAFPMDLRLFNTVDDMEDADRLYHLFAIVVHIGNGPHHGHYISIIK--NCGTWFV 388
Query: 64 FDDEHVSNLGHH--PFGEGSSSSGSKVV 89
FDD++V ++ P G S+SGS V
Sbjct: 389 FDDDNVYSIPESDIPKYFGDSNSGSAYV 416
>gi|24660425|gb|AAH39593.1| Ubiquitin specific peptidase 20 [Homo sapiens]
gi|119608320|gb|EAW87914.1| ubiquitin specific peptidase 20, isoform CRA_b [Homo sapiens]
Length = 913
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 597 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 655
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 656 YEFDDQYVTEV 666
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 663 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 778 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 834
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 835 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 875
>gi|183396780|ref|NP_001103773.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397134|ref|NP_006667.3| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397136|ref|NP_001008563.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|116242837|sp|Q9Y2K6.2|UBP20_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2;
Short=hVDU2
Length = 914
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 876
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K + G
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARH-GA 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+++ +S+P+ +IY L AVL+H G + ++GHY IK N GQW++
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFSCHAGHYYCYIKASN-GQWYQ 385
Query: 64 FDDEHVS 70
+D VS
Sbjct: 386 MNDSIVS 392
>gi|410227942|gb|JAA11190.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410227944|gb|JAA11191.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263220|gb|JAA19576.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263222|gb|JAA19577.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303424|gb|JAA30312.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303426|gb|JAA30313.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 876
>gi|355752999|gb|EHH57045.1| hypothetical protein EGM_06605 [Macaca fascicularis]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|114627163|ref|XP_520313.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
troglodytes]
gi|332833113|ref|XP_003339229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Pan
troglodytes]
gi|410336889|gb|JAA37391.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410336891|gb|JAA37392.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 876
>gi|402896308|ref|XP_003911245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Papio anubis]
gi|402896310|ref|XP_003911246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Papio anubis]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|402584491|gb|EJW78432.1| hypothetical protein WUBG_10659, partial [Wuchereria bancrofti]
Length = 363
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI SP +P L + D+ YD+ AV+IH+G + GHY LIK T QW
Sbjct: 307 KKKIHSPLQYPRVLQLG---------DVKYDICAVMIHEGPNADCGHYYDLIKHPGTRQW 357
Query: 62 WEFDDE 67
+ ++DE
Sbjct: 358 FTYNDE 363
>gi|355570050|gb|EHH25577.1| hypothetical protein EGK_21432 [Macaca mulatta]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|195143509|ref|XP_002012740.1| GL23766 [Drosophila persimilis]
gi|194101683|gb|EDW23726.1| GL23766 [Drosophila persimilis]
Length = 421
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 322 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 379
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 380 FDDDMVDKI 388
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+ +P L+++ LS+P+ L Y L AVL+H+G +SGHY + +K + G
Sbjct: 260 MGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGHYFSYVKARH-GA 318
Query: 61 WWEFDDEHVSN 71
W++ DD V++
Sbjct: 319 WYKMDDTKVTS 329
>gi|302852262|ref|XP_002957652.1| hypothetical protein VOLCADRAFT_68392 [Volvox carteri f.
nagariensis]
gi|300257064|gb|EFJ41318.1| hypothetical protein VOLCADRAFT_68392 [Volvox carteri f.
nagariensis]
Length = 364
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 3 KKITSPFCFPGELNMQRRLSE-PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+K+ FP EL + ++ P D +Y L+AV++H G+ + GHY++LIK + QW
Sbjct: 263 RKLMYRVVFPMELKLSNTTADDPGAADTLYTLTAVVVHLGSGPHHGHYVSLIK--SGPQW 320
Query: 62 WEFDDEHV 69
FDDE V
Sbjct: 321 LSFDDESV 328
>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
Length = 361
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 261 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 318
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 319 FDDDMVDKI 327
>gi|24649152|ref|NP_651099.1| CG7023 [Drosophila melanogaster]
gi|195331161|ref|XP_002032271.1| GM26467 [Drosophila sechellia]
gi|7300926|gb|AAF56066.1| CG7023 [Drosophila melanogaster]
gi|33636511|gb|AAQ23553.1| RE52890p [Drosophila melanogaster]
gi|194121214|gb|EDW43257.1| GM26467 [Drosophila sechellia]
gi|220951116|gb|ACL88101.1| CG7023-PB [synthetic construct]
Length = 424
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 325 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 382
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 383 FDDDMVDKI 391
>gi|428170656|gb|EKX39579.1| hypothetical protein GUITHDRAFT_89035 [Guillardia theta CCMP2712]
Length = 406
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTG 59
M KI+ FP + L+M+ + E + IYDL AV+ H+G A++ GHYIA I++ + G
Sbjct: 311 MGTKISEHIQFPIKGLDMRPFIKE----NAIYDLLAVIEHRG-ALHGGHYIAYIRNNSDG 365
Query: 60 QWWEFDDEHVSNL 72
+W+EF+D V+ +
Sbjct: 366 KWFEFNDSQVNTI 378
>gi|109110028|ref|XP_001107144.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Macaca
mulatta]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|383410867|gb|AFH28647.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|383410869|gb|AFH28648.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|380809004|gb|AFE76377.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|380809006|gb|AFE76378.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942948|gb|AFI35079.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942950|gb|AFI35080.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLID 304
C C ++
Sbjct: 779 VCSICQVE 786
>gi|198450754|ref|XP_001358111.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
gi|198131177|gb|EAL27248.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 333 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 390
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 391 FDDDMVDKI 399
>gi|224134524|ref|XP_002327426.1| predicted protein [Populus trichocarpa]
gi|222835980|gb|EEE74401.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
S L IYDL AVL HKG + +SGHY+A +K E +G+W E+DD++
Sbjct: 407 SHLTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDDN 449
>gi|195443886|ref|XP_002069621.1| GK11474 [Drosophila willistoni]
gi|194165706|gb|EDW80607.1| GK11474 [Drosophila willistoni]
Length = 438
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 339 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 396
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 397 FDDDMVDKI 405
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 265 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 322
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 323 FDDDMVDKI 331
>gi|326930344|ref|XP_003211307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Meleagris
gallopavo]
Length = 906
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 123/313 (39%), Gaps = 46/313 (14%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 590 KINSHVSFPLEGLDLRPFLAKECVSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 647
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W+EFDD++V+ + + V +E V E E V L S +
Sbjct: 648 WYEFDDQYVTEVHE-----------TVVQNAEAYVLFYRKSSEEAVRERQKVVSLASMKE 696
Query: 121 YNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDD--IFLPSH 178
+ ++ +F + ++ +N E + ++ I + DD + LP +
Sbjct: 697 H---SLLQFYISREWLNKFNTF--AEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQN 751
Query: 179 L----------GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLE 228
+ G + L + E L K R + + K L E+P
Sbjct: 752 VWEYLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRTEIDTFIKLNKAFLAEESP----- 806
Query: 229 EPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH--GKVPESKIGSMKRISSKAWN 280
Y IS W R+W D P +DN+ I G + + +IS + W
Sbjct: 807 SVIYCISMQWFREWEAFVRGKDNEPPGPIDNSKIALTKAGGHMHVKQGADYGQISEETWI 866
Query: 281 KFFFKYNGGPALT 293
Y GGP +
Sbjct: 867 YLSTLYGGGPEIA 879
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL S L+ ++IS +WL ++
Sbjct: 656 VTEVHETVVQNAEAYVLFYRKSSEEAVRERQKVVSLASMKEHSLLQ---FYISREWLNKF 712
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N + C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 713 NTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLYVC 772
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRKNL 355
C ++ A R + L L+ + Y +S W ++W R K+
Sbjct: 773 SICQVE---IEALAKRRRTEIDTFIKLNKAFLAEESPSVIYCISMQWFREWEAFVRGKDN 829
Query: 356 DAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ P D + G M K GA + E W+++
Sbjct: 830 EPPGPIDNSKIALTKA--GGHMHVKQ-GADYGQISEETWIYL 868
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 265 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 322
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 323 FDDDMVDKI 331
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 263 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 320
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 321 FDDDMVDKI 329
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 265 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 322
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 323 FDDDMVDKI 331
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|194743990|ref|XP_001954481.1| GF16711 [Drosophila ananassae]
gi|190627518|gb|EDV43042.1| GF16711 [Drosophila ananassae]
Length = 416
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL+AV+IH G+ N GHYI+++K G W
Sbjct: 317 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSH--GLWLL 374
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 375 FDDDMVDKI 383
>gi|326930828|ref|XP_003211542.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Meleagris
gallopavo]
Length = 874
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 193 KITKDVGYPEFLNIRPYMSQNTGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 251
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 252 MNDSLVHCSNI 262
>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
guttata]
Length = 366
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + E +D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 267 KKLSYRVVFPLELKLSNTVDE--YVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 323 FFDDESV 329
>gi|5002593|emb|CAB44350.1| LSFR3A protein [Homo sapiens]
Length = 223
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 18 KINSHVSFPLEGLDLRPFLAKECTSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 75
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 76 WYEFDDQYVTEV 87
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 84 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 138
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+
Sbjct: 139 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNQLY 198
Query: 297 YCMTCLID 304
C C ++
Sbjct: 199 VCSICQVE 206
>gi|115433152|ref|XP_001216713.1| hypothetical protein ATEG_08092 [Aspergillus terreus NIH2624]
gi|114189565|gb|EAU31265.1| hypothetical protein ATEG_08092 [Aspergillus terreus NIH2624]
Length = 1123
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS + IY L VL+H G +N+GHY A +K G W
Sbjct: 425 KINDRHAFPMEFDATPYLSNDADKSEPWIYQLHGVLVHSGD-LNAGHYYAFLKPTKDGFW 483
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDD+ V+ E + ++ P V QP Y
Sbjct: 484 YKFDDDRVTRATDKEVLEENYGGEYELANGAPGVRQP---------------------YT 522
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMI 167
G + +R S +AYML+Y +R+ + D + D IE+ ++
Sbjct: 523 RGLSTKR--SMNAYMLVY-IRKSRLDDVLLPITKDDIPSHIETRLV 565
>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|327278969|ref|XP_003224231.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47-like [Anolis
carolinensis]
Length = 1427
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH----PFGEGSSSS 84
L+Y+L +V++H G+A GHY A IK + QW+ F+D+HVS + H +G S S
Sbjct: 536 LLYELFSVMVHSGSAAG-GHYYACIKSFSDDQWYSFNDQHVSKITHEDIKKTYGGTSGSR 594
Query: 85 G 85
G
Sbjct: 595 G 595
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGDPIMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + L+ DL Y L AV++H G+ N GHYI+L+K N W
Sbjct: 268 KKLSYRVVFPLELKL---LNTVDNSDLEYSLFAVVVHVGSGPNHGHYISLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 323 FFDDENV 329
>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
latipes]
Length = 369
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + E +D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 267 KKLSYRVVFPLELKLSNTVDE--YVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 323 FFDDESV 329
>gi|145502787|ref|XP_001437371.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404521|emb|CAK69974.1| unnamed protein product [Paramecium tetraurelia]
Length = 2566
Score = 52.4 bits (124), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 1 MKKKITSPFCFPGELNMQR--------RLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIAL 52
+K K+ F FP E+NM + L D IY L VLIH G+A +SGHY +
Sbjct: 1898 LKLKVNDYFEFPSEINMFKWTKDHLINNLQLDDHTDYIYKLVGVLIHTGSA-DSGHYYSF 1956
Query: 53 IKDENTGQWWEFDDEHVS-----NLGHHPFG 78
I + +W+EFDD VS NL FG
Sbjct: 1957 INSQEN-KWFEFDDRFVSPFKFENLKQECFG 1986
>gi|118401690|ref|XP_001033165.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89287512|gb|EAR85502.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1039
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS-----NLGHHPFGE-GSSSS 84
Y L +V+IH G A +SGHY A IKD +T +WW ++D VS N+ G G +S+
Sbjct: 549 YLLQSVIIHDGQA-DSGHYYAFIKDHSTKKWWRYNDIQVSEETEENVFKEALGGWGKASA 607
Query: 85 GSKVVRSEPVVCQPVSERVEGANENHVDVHLPSS 118
S + E V P A E + +HL S+
Sbjct: 608 YSLIYVKEEVAIPP------QAKEKPIRLHLASN 635
>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
rubripes]
Length = 369
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|334184367|ref|NP_001189575.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|330252198|gb|AEC07292.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 379
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + E +D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 281 KKLSYRVVFPLELKLSNTVDE--YVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 336
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 337 FFDDESV 343
>gi|336390086|gb|EGO31229.1| hypothetical protein SERLADRAFT_336365 [Serpula lacrymans var.
lacrymans S7.9]
Length = 272
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP EL + + + D +Y+L A+++H GT + GHY+++I+ G W
Sbjct: 181 KLAYRVAFPFELRLFNTVDDAQNPDRLYELFAIVVHIGTGPHHGHYVSIIR--TMGFWLI 238
Query: 64 FDDEHVSNLGHH--PFGEGSSSSGSKVV 89
FDD+ V + P G S+SGS V
Sbjct: 239 FDDDTVDTIKESDIPKYFGDSNSGSAYV 266
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 595 KINSHVSFPLEGLDLRPFLAKECVSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 652
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 653 WYEFDDQYVTEV 664
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER Q+V SL S L+ ++IS +WL
Sbjct: 661 VTEVHETVVQNAEAYVLFYRKSSE-EAVRER-QKVVSLASMKEHSLLQ---FYISREWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 716 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 776 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 832
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D + P G + ++ GA + E W+++
Sbjct: 833 DNEPPGPIDNTKIALTK-PGGHVQVKQ--GADYGQISEETWVYL 873
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+KIT+ +P L++ LS+ +Q +Y L V++H G+ NSGHY +K+ G+W
Sbjct: 352 RKITNMIDYPETLSLNEILSD-NQTSPMYQLYGVIVHAGSGPNSGHYYTFVKNY-AGKWL 409
Query: 63 EFDDEHVSNLGHHPFG 78
+D+ V + P G
Sbjct: 410 RINDDEVDTIPRAPLG 425
>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
Length = 366
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + L+ DL Y L AV++H G+ N GHYI+L+K N W
Sbjct: 268 KKLSYRVVFPLELKL---LNTVDNSDLEYSLFAVVVHVGSGPNHGHYISLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 323 FFDDENV 329
>gi|170091622|ref|XP_001877033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648526|gb|EDR12769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M +KI F L+++ +SE Q Y L ++ H G NSGHY A +K ++ GQ
Sbjct: 226 MGRKIGHHINFEEHLSLKPFMSE-GQHGPSYSLYGIICHAGGGPNSGHYYAFVKAKD-GQ 283
Query: 61 WWEFDDEHVSNLGHHP 76
WWE +DE S +G P
Sbjct: 284 WWEMNDEMRSRVGSAP 299
>gi|224010012|ref|XP_002293964.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970636|gb|EED88973.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 169
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI++ P L + R S + +Y L AV H GT+ + GHY+A D TG W
Sbjct: 99 KKKISTKVLLPRTLEVSRASSNSNDDKSVYILCAVQNHLGTSAHGGHYVAECLDWMTGLW 158
Query: 62 WEFDDEHV 69
+EF+D+ V
Sbjct: 159 YEFNDDEV 166
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K ++GQW++
Sbjct: 334 KITKEVGYPEFLNIRPYMSQSNGEPVLYGLYAVLVHSGYSCHAGHYYCYVK-ASSGQWYQ 392
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 393 MNDSLVHASNI 403
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNI 407
>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
carolinensis]
Length = 366
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSGDAINLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|10439903|dbj|BAB15591.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHH 75
++ + N +H
Sbjct: 367 YKL----ILNTNYH 376
>gi|255587069|ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 482
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
S L IYDL AVL HKG + +SGHY+A +K E +G+W E+DD++
Sbjct: 407 SSLTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIEYDDDN 449
>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
sapiens]
gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
18
Length = 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
Length = 347
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 250 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 307
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 308 FDDDIVEKIDAQAIEEFYGLTSDISK 333
>gi|406602220|emb|CCH46210.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 1199
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 4 KITSPFCFPGELNMQRRL--SEPSQLD-LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI FP +++ L SE S D LIYDL VL+H G +++GHY A+IK + T
Sbjct: 448 KINDRHEFPDSIDLSPFLEHSEGSNPDPLIYDLHGVLVHAGD-ISTGHYYAMIKPDKTNN 506
Query: 61 WWEFDDEHV 69
W+ FDD+ V
Sbjct: 507 WYRFDDDKV 515
>gi|449691049|ref|XP_004212543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Hydra magnipapillata]
Length = 114
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 4 KITSPFCFP-GELNMQRRLSEPSQLDLI---YDLSAVLIHKGTAVNSGHYIALIKDENTG 59
KI++ FP +L+M+ LS+ Q YDL+AV+ H G+ V GHYIA K+ G
Sbjct: 44 KISTYISFPLKDLDMEMFLSKDCQKSSSCSKYDLTAVITHFGS-VGGGHYIAHAKNYVNG 102
Query: 60 QWWEFDDEHVS 70
+W+EF+D HV+
Sbjct: 103 KWYEFNDSHVT 113
>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
sapiens]
gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
19
Length = 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
sapiens]
gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
11
Length = 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|18043999|gb|AAH19735.1| Usp20 protein [Mus musculus]
Length = 321
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 5 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 63
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 64 YEFDDQYVTEV 74
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 71 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 125
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 126 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 185
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 186 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 238
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 239 VKGKDSEPPGPIDNSRIAQVK 259
>gi|148234074|ref|NP_001088634.1| ubiquitin carboxyl-terminal hydrolase 47 [Xenopus laevis]
gi|82179841|sp|Q5U252.1|UBP47_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 47; AltName:
Full=Deubiquitinating enzyme 47; AltName: Full=Ubiquitin
thioesterase 47; AltName:
Full=Ubiquitin-specific-processing protease 47
gi|55249607|gb|AAH86278.1| LOC495686 protein [Xenopus laevis]
Length = 1350
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 9 FCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
C N+++ ++ + +Y+L +V++H G+A GHY A IK GQW+ F+D+H
Sbjct: 449 ICLETNSNIEKLNKSVAEKNSLYELFSVMVHSGSAAG-GHYYACIKSFADGQWYSFNDQH 507
Query: 69 VSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVER 128
VS + + + + GA N YY+ +
Sbjct: 508 VSRITQ----------------------EDIKKTYGGATGNR--------GYYSSAFA-- 535
Query: 129 FTSNDAYMLMYNLR 142
+S +AYMLMY L+
Sbjct: 536 -SSTNAYMLMYRLK 548
>gi|326504080|dbj|BAK02826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 370
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL M S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMELKMG---STSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 324
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 325 FFDDENV 331
>gi|425772501|gb|EKV10902.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
gi|425774933|gb|EKV13224.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
Length = 1085
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 61/208 (29%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
M K+ FP E + LSE + +Y L VL+H G +++GHY A +K
Sbjct: 397 MMAKVNDYHTFPMEFDAAPYLSESADKSESWVYQLHGVLVHSGN-LDAGHYYAFLKPTKD 455
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSS 118
G W+ FDD+ V+ + E +EN+ D S
Sbjct: 456 GHWYRFDDDRVNR----------------------------ATDKEVLDENYGD----SQ 483
Query: 119 EYYNGSNVER--FTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLP 176
+ NG+ R +N+AYML+Y +R+ ++D+ V DD+ P
Sbjct: 484 QRTNGATGGRSAIRTNNAYMLVY-VRKTRQDNVLLPVT---------------KDDV--P 525
Query: 177 SHLGKDIKELNRSYLDGCEQFKLRKNRE 204
SH+ K + E D E + +K RE
Sbjct: 526 SHIEKRMSE------DRVEMLRRKKERE 547
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G NSGHY +K G+W++
Sbjct: 297 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSNSGHYFCCVK-AGHGKWYK 355
Query: 64 FDDEHVS 70
DD V+
Sbjct: 356 MDDTKVT 362
>gi|149024346|gb|EDL80843.1| rCG31281 [Rattus norvegicus]
Length = 288
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 186 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 245
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 246 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 285
>gi|157870053|ref|XP_001683577.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
gi|68126643|emb|CAJ04347.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
Length = 809
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 21 LSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+S P+ + D Y+L+AV +H+G +++ GHY L K N G W+EF+D HVS L
Sbjct: 424 VSSPATMKRSDCQYELNAVCVHEGRSIDYGHYYTLAKAPN-GMWYEFNDSHVSRL 477
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G NSGHY +K G+W++
Sbjct: 262 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSNSGHYFCCVK-AGHGKWYK 320
Query: 64 FDDEHVS 70
DD V+
Sbjct: 321 MDDTKVT 327
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G NSGHY +K G+W++
Sbjct: 297 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSNSGHYFCCVK-AGHGKWYK 355
Query: 64 FDDEHVS 70
DD V+
Sbjct: 356 MDDTKVT 362
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYKMDDAEVT 355
Query: 71 NLG 73
G
Sbjct: 356 ASG 358
>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
sapiens]
gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
22
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHTGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 349 MDDAEVTASG 358
>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
sapiens]
gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
13
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|260825772|ref|XP_002607840.1| hypothetical protein BRAFLDRAFT_199699 [Branchiostoma floridae]
gi|229293189|gb|EEN63850.1| hypothetical protein BRAFLDRAFT_199699 [Branchiostoma floridae]
Length = 1318
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 34/110 (30%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L +++IH G+A GHY A IK GQW+ F+D+HV+ + + + SGS
Sbjct: 455 MYELFSIMIHSGSAA-GGHYYAYIKSFRDGQWYSFNDQHVTKITYDDIRKTYGGSGSH-- 511
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMY 139
YY+G+ +S +AYMLMY
Sbjct: 512 ----------------------------RGYYSGAFA---SSTNAYMLMY 530
>gi|345306120|ref|XP_001507999.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ornithorhynchus anatinus]
Length = 928
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 612 KINSHVSFPLEGLDLRPFLAKECVSQI-TTYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 669
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 670 WYEFDDQYVTEV 681
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL + ++IS +WL
Sbjct: 678 VTEVHETVVQNAEAYVLFYRKSSE-EAMRERQQVVS--LATMKEPSLLQ--FYISREWLN 732
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 733 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLY 792
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
C C ++ A R + L + + Y +S W ++W
Sbjct: 793 VCSVCQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREW 842
>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
sapiens]
gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
17
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
Length = 349
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 265 KITKDVGYPELLNIRPYMSQTSGDPVMYGLYAVLVHSGYSSHAGHYYCYVKASN-GQWYQ 323
Query: 64 FDDEHV 69
+D V
Sbjct: 324 MNDNVV 329
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYKMDDAEVT 355
Query: 71 NLG 73
G
Sbjct: 356 ASG 358
>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|321264838|ref|XP_003197136.1| ubiquitin carboxyl-terminal hydrolase 5 [Cryptococcus gattii WM276]
gi|317463614|gb|ADV25349.1| ubiquitin carboxyl-terminal hydrolase 5, putative [Cryptococcus
gattii WM276]
Length = 1113
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L E + +Y L VL+H G ++ GHY ALIK E G+W
Sbjct: 415 KINDRHEFPFEIDLGEFLDESADRSQSHVYKLHGVLVHSGD-LHGGHYFALIKPEKDGRW 473
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDD+ V+ PV + V E G + ++ +P +
Sbjct: 474 YKFDDDRVT----------------------PVTDKEVLEDNYGG--DMLNGLVPPHQRT 509
Query: 122 NGSNVERFTSNDAYMLMY 139
+++FT +AYML+Y
Sbjct: 510 QARTLKKFT--NAYMLVY 525
>gi|281212255|gb|EFA86415.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 558
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK+ FP E+ +Q +S+ + D Y L AV+IH G N GHY +++K G W
Sbjct: 425 KKLNYRVVFPFEIIIQNTVSDIEEPDKKYHLFAVVIHAGNGPNHGHYTSMVKSN--GYWI 482
Query: 63 EFDDEHVSNLGHHP-------FGEGSSSSG 85
FDDE N+G P FG S G
Sbjct: 483 GFDDE---NMGIIPESDIFDIFGSSSEYFG 509
>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
gallopavo]
Length = 578
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 481 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 538
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 539 FDDDIVEKI 547
>gi|149026259|gb|EDL82502.1| rCG28827, isoform CRA_c [Rattus norvegicus]
Length = 680
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 653 WYEFDDQSVTEV 664
>gi|348570388|ref|XP_003470979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cavia
porcellus]
Length = 901
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +++ H GTA SGHYIA ++ GQW
Sbjct: 583 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSIICHHGTA-GSGHYIAYCQNVINGQW 641
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 642 YEFDDQYVTEV 652
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 32/231 (13%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 649 VTEVHETVVQHAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 703
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N S C HG +P +K + + W + ++ GGPA+ +
Sbjct: 704 KFNTFAEPGPITNHSFLCAHGGIPPNKYHYIDDLVVILPQPVWEHLYSRFGGGPAVNHLY 763
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + Y +S W ++W
Sbjct: 764 VCSVCQVE-------IEALARRRKVEIETFIKLNKAFQAEESPGVIYCISMQWFREWEAF 816
Query: 350 --TRRKNLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFI 397
++ + + P D I+ H QL P GA + E W ++
Sbjct: 817 VKSKDNDNEPPGPIDNSRIAQIKGGSHVQLKP----GADYGQISEETWAYL 863
>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
Length = 314
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 206 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 264
Query: 64 FDDEHVS 70
DD V+
Sbjct: 265 MDDAEVT 271
>gi|149026258|gb|EDL82501.1| rCG28827, isoform CRA_b [Rattus norvegicus]
Length = 672
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 644
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 645 WYEFDDQSVTEV 656
>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
Length = 530
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|154338211|ref|XP_001565330.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062379|emb|CAM42239.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 807
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 10 CFPGELNMQRRLSEPS---QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDD 66
P L Q +S + + D Y+L+AV +H+G +++ GHY L K N G W+EF+D
Sbjct: 419 ALPDHLQSQDGMSSSATAKRADCQYELNAVCVHEGRSIDYGHYYTLAKASN-GMWYEFND 477
Query: 67 EHVSNL 72
HVS L
Sbjct: 478 SHVSRL 483
>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
6; AltName: Full=Deubiquitinating enzyme 17-like protein
6; AltName: Full=Ubiquitin thioesterase 17-like protein
6; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 6
Length = 398
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
Length = 398
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|118399511|ref|XP_001032080.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286418|gb|EAR84417.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 4350
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 2 KKKITSPFCFPGELNM----QRRLSEPSQLDLI-----------YDLSAVLIHKGTAVNS 46
KKKI F FP ELN+ +++L E +L + LS VL+H GT+ S
Sbjct: 3615 KKKINDYFEFPLELNLRNWTKQKLFEQEGRNLNESDIHPDEYYNFQLSGVLVHNGTS-ES 3673
Query: 47 GHYIALIKDENTGQWWEFDDEHV 69
GHY + IK++ +W+EF+D +V
Sbjct: 3674 GHYYSFIKNKEDSKWYEFNDSYV 3696
>gi|241952340|ref|XP_002418892.1| deubiquitinating enzyme, putative; ubiquitin carboxyl-terminal
hydrolase, putative; ubiquitin thioesterase, putative;
ubiquitin-specific protease, putative;
ubiquitin-specific-processing protease, putative
[Candida dubliniensis CD36]
gi|223642231|emb|CAX44198.1| deubiquitinating enzyme, putative [Candida dubliniensis CD36]
Length = 581
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI S FP LN+ S + D IY L AV++H+G ++N+GHY IK N G W++
Sbjct: 500 KIQSHIDFPLFLNV-TEYSVINDTDYIYQLFAVVVHQG-SINTGHYTVFIK--NNGNWYK 555
Query: 64 FDDEHVS 70
FDD V+
Sbjct: 556 FDDSVVT 562
>gi|332819097|ref|XP_003310296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Pan troglodytes]
Length = 247
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ ++ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 7 KLAKNVQYPECLDMQPYMSQQNKGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 65
Query: 64 FDDEHVS 70
DD V+
Sbjct: 66 MDDAEVT 72
>gi|148233102|ref|NP_001090641.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus (Silurana)
tropicalis]
gi|281312479|sp|A0JM59.1|UBP20_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|117557978|gb|AAI25750.1| usp20 protein [Xenopus (Silurana) tropicalis]
Length = 884
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E LN++ L+ E YDL AV+ H G+A +SGHYI+ ++ GQW
Sbjct: 568 KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSA-SSGHYISYCQNVINGQW 626
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 627 YEFDDQYVTEV 637
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL + L+ ++IS +WL ++
Sbjct: 634 VTEVHETVVQNAEAYVLFYRKSSEEAERERQKVVSLAAMKESGLLQ---FYISREWLNKF 690
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N S C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 691 NTFAEPGPISNQSFLCSHGGIPPNKYHYIDDLVVILPQSVWEYLYNRFGGGPAVNHLYVC 750
Query: 299 MTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
C ++ ++ RRK + L + + Y +S W ++W +
Sbjct: 751 SICQVE-------IEALAKRRKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVK 803
Query: 352 RKNLDAPSEAD 362
K+ D P D
Sbjct: 804 AKDSDPPGPID 814
>gi|393245421|gb|EJD52931.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1108
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI F FP E++++ L E S +Y L+ VL+H G ++ GHY ALIK + +W
Sbjct: 413 KINDRFEFPFEIDLEEFLDESSDRSQPWVYRLTGVLVHSGD-LHGGHYFALIKPDRNTRW 471
Query: 62 WEFDDEHVS 70
+FDD+ V+
Sbjct: 472 LKFDDDRVT 480
>gi|21740043|emb|CAD39038.1| hypothetical protein [Homo sapiens]
Length = 345
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 243 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 302
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 303 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 342
>gi|58270608|ref|XP_572460.1| ubiquitin carboxyl-terminal hydrolase 5 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134118098|ref|XP_772430.1| hypothetical protein CNBL2960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255043|gb|EAL17783.1| hypothetical protein CNBL2960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228718|gb|AAW45153.1| ubiquitin carboxyl-terminal hydrolase 5, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1113
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQ--LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L E + +Y L VL+H G ++ GHY ALIK E G+W
Sbjct: 415 KINDRHEFPFEIDLGEFLDESADRAQSHVYKLHGVLVHSGD-LHGGHYFALIKPEKDGRW 473
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDD+ V+ PV + V E G + ++ +P +
Sbjct: 474 YKFDDDRVT----------------------PVTDKEVLEDNYGG--DMLNGLVPPHQRT 509
Query: 122 NGSNVERFTSNDAYMLMY 139
+++FT +AYML+Y
Sbjct: 510 QARTLKKFT--NAYMLVY 525
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+ KKI F +LN+ R SE L Y L ++ H G SGHYIA ++D + G
Sbjct: 393 LGKKIGRSIGFDEDLNLGRHTSEDHGKGLRYRLYGIVHHAGGGPQSGHYIAHVRD-SVGS 451
Query: 61 WWEFDDEHVS 70
W DD HVS
Sbjct: 452 WNRMDDSHVS 461
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 340 KITKDVGYPEFLNIRPYMSQSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 398
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 399 MNDSLVHSSNV 409
>gi|405124319|gb|AFR99081.1| ubiquitin carboxyl-terminal hydrolase 5 [Cryptococcus neoformans
var. grubii H99]
Length = 1113
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQ--LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L E + +Y L VL+H G ++ GHY ALIK E G+W
Sbjct: 415 KINDRHEFPFEIDLGEFLDESADRAQSHVYKLHGVLVHSGD-LHGGHYFALIKPEKDGRW 473
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDD+ V+ PV + V E G + ++ +P +
Sbjct: 474 YKFDDDRVT----------------------PVTDKEVLEDNYGG--DMLNGLVPPHQRT 509
Query: 122 NGSNVERFTSNDAYMLMY 139
+++FT +AYML+Y
Sbjct: 510 QARTLKKFT--NAYMLVY 525
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|189236253|ref|XP_974193.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 354
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 255 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 312
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 313 FDDDQVDKI 321
>gi|448119840|ref|XP_004203832.1| Piso0_000853 [Millerozyma farinosa CBS 7064]
gi|359384700|emb|CCE78235.1| Piso0_000853 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 1 MKKKITSPF--CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
+K K+ F P +++ PS +Y+LSAV+ H G++ +SGHY A ++DE+
Sbjct: 385 IKSKLRDDFKKILPEGVDIDTTTENPSS---VYELSAVITHSGSSADSGHYQAFVRDEDD 441
Query: 59 ---GQWWEFDDEHVSNL 72
+WW F+D+ VS++
Sbjct: 442 LDGERWWRFNDDKVSSI 458
>gi|308813229|ref|XP_003083921.1| putative ubiquitin-specific protease UBP6 (ISS) [Ostreococcus
tauri]
gi|116055803|emb|CAL57888.1| putative ubiquitin-specific protease UBP6 (ISS) [Ostreococcus
tauri]
Length = 493
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 23 EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDE 67
E ++L YDL AVL HKG + +SGHY++ +K +N G W +FDDE
Sbjct: 418 EGTRLTGFYDLIAVLTHKGRSADSGHYVSWVKHDN-GSWTQFDDE 461
>gi|189217810|ref|NP_001121345.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus laevis]
gi|281312478|sp|B1WBD7.1|UBP20_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|171846441|gb|AAI61716.1| LOC100158436 protein [Xenopus laevis]
Length = 840
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E LN++ L+ E YDL AV+ H G+A +SGHYI+ ++ GQW
Sbjct: 524 KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSA-SSGHYISYCQNVINGQW 582
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 583 YEFDDQYVTEV 593
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL + L+ ++IS +WL ++
Sbjct: 590 VTEVHETVVQNAEAYVLFYRKSSEEAERERQKVVSLAAMKESGLLQ---FYISREWLNKF 646
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N S C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 647 NTFAEPGPISNQSFLCAHGGIPPNKYHYIDDLVVILPQSVWEYLYNRFGGGPAVNHLYVC 706
Query: 299 MTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
C ++ ++ RRK + L + + Y +S W ++W +
Sbjct: 707 SICQVE-------IEALAKRRKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVK 759
Query: 352 RKNLDAPSEAD 362
K+ D P D
Sbjct: 760 AKDSDPPGPID 770
>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
Length = 366
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 267 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 324
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 325 FDDDQVDKI 333
>gi|218188435|gb|EEC70862.1| hypothetical protein OsI_02374 [Oryza sativa Indica Group]
Length = 478
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
QL IYDL AVL HKG + +SGHY+ +K ++ G+W EFDD++ S
Sbjct: 406 QLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDNPS 449
>gi|6014652|gb|AAF01440.1|AF187961_1 ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces pombe]
Length = 1129
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
M KI FP E++++ LSE + +Y L VL+H G ++ GHY ALIK E
Sbjct: 433 MMVKINDRHEFPLEIDLEPYLSETADKSESHVYVLHGVLVHGGD-LHGGHYYALIKPEKD 491
Query: 59 GQWWEFDDEHVS----------NLGHHPFGEGSSSSGSKVVR 90
W++FDD+ V+ N G P G +G+ R
Sbjct: 492 SNWFKFDDDRVTRATIKEVLEDNYGGEPAGRAKGYNGNPFKR 533
>gi|19112133|ref|NP_595341.1| ubiquitin C-terminal hydrolase Ubp15 [Schizosaccharomyces pombe
972h-]
gi|15214325|sp|Q9UTT1.2|UBP21_SCHPO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|12311746|emb|CAC22603.1| ubiquitin C-terminal hydrolase Ubp15 [Schizosaccharomyces pombe]
Length = 1129
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
M KI FP E++++ LSE + +Y L VL+H G ++ GHY ALIK E
Sbjct: 433 MMVKINDRHEFPLEIDLEPYLSETADKSESHVYVLHGVLVHGGD-LHGGHYYALIKPEKD 491
Query: 59 GQWWEFDDEHVS----------NLGHHPFGEGSSSSGSKVVR 90
W++FDD+ V+ N G P G +G+ R
Sbjct: 492 SNWFKFDDDRVTRATIKEVLEDNYGGEPAGRAKGYNGNPFKR 533
>gi|406860385|gb|EKD13444.1| putative ubiquitin carboxy terminal hydrolase [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 1344
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 29/212 (13%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP + LS+ + +Y L VL+H G +N+GHY A IK G +
Sbjct: 546 KINDRYEFPETFDAAPFLSDDADRSESYVYQLHGVLVHSGD-LNAGHYYAFIKPNPDGWF 604
Query: 62 WEFDDEHVSN------LGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHV-DVH 114
+++DD+ V+ L + GE +G K RS+P++ Q + + + V DV
Sbjct: 605 YKYDDDRVTKATLREVLEDNYGGEYPIHNGMK-ARSKPLMRQNSAYMLVYIRQTRVHDVL 663
Query: 115 LPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIF 174
LP + G +V R D+E +KR+ + + + + D+ F
Sbjct: 664 LPVT----GDDVPNHLQK---------RLDEEAAKRQALKKEREEAHLYLNVRVITDETF 710
Query: 175 LPSHLGKDIKELNRSYLD---GCEQFK-LRKN 202
L H G D+ +RS L+ +QF+ LRKN
Sbjct: 711 L-RHGGTDLTCFDRSPLEDPAAAKQFRYLRKN 741
>gi|168015826|ref|XP_001760451.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688465|gb|EDQ74842.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 492
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
IYDL AVL HKG + +SGHY++ +K +N G+W EFDD+
Sbjct: 421 IYDLVAVLTHKGRSADSGHYVSWVKQDN-GKWIEFDDDQ 458
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+ KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW
Sbjct: 335 RGKITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQW 393
Query: 62 WEFDDE--HVSNL 72
++ +D H SN+
Sbjct: 394 YQMNDSLVHSSNV 406
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|157134982|ref|XP_001663387.1| hypothetical protein AaeL_AAEL013203 [Aedes aegypti]
gi|108870336|gb|EAT34561.1| AAEL013203-PA [Aedes aegypti]
Length = 1296
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 35/110 (31%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L A++IH G+A + GHY A IKD N+ +W+ F+D+ VS
Sbjct: 514 VYELFAIMIHSGSA-SGGHYYAYIKDFNSSKWYSFNDQTVS------------------- 553
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMY 139
P+ + + G S YY+G+ +S +AYMLMY
Sbjct: 554 ---PITQDDIQKSFGGGT---------SKAYYSGAYS---SSTNAYMLMY 588
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 340 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 398
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 399 MNDSLVHSSNV 409
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|357135165|ref|XP_003569182.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like
[Brachypodium distachyon]
Length = 473
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
QL IYDL AVL HKG + +SGHY+ +K ++ G+W EFDD++ S
Sbjct: 401 QLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDNPS 444
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|395536735|ref|XP_003770367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Sarcophilus
harrisii]
Length = 892
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 591 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 648
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 649 WYEFDDQSVTEV 660
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 39/251 (15%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ + E + L + + + ++ V +LL+ PSL + +++S WL
Sbjct: 655 QSVTEVSEVTVQNAEAYVLFYRKSSEEAQKERRRVSNLLNIME-PSLLQ--FYVSRQWLN 711
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + + G
Sbjct: 712 KFKTFAEPGPISNQDFLCVHGGVPPRKAGYIEDLVVMLPQNIWDNLYSRVKTG------R 765
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVE----GTYYVSKSWLQQW--- 349
C CL RR++ +G D+ E + +S W ++W
Sbjct: 766 LCHMCL--------------RRRRAGRGCPPDLNRAFQEEESPAAFFCISMQWFREWEGF 811
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
+ K+ D P D I+ G ++ ++ GA + E W F+ + P+ +
Sbjct: 812 VKGKDGDPPGPIDNTKIAIIK--GGSILLKQ--GADSGQISEETWHFL-QSIYGGGPEVI 866
Query: 410 LGCSTFPLDSE 420
L P+D +
Sbjct: 867 LRPPVAPIDPD 877
>gi|398015929|ref|XP_003861153.1| ubiquitin hydrolase, putative [Leishmania donovani]
gi|322499378|emb|CBZ34451.1| ubiquitin hydrolase, putative [Leishmania donovani]
Length = 810
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
D Y+L+AV +H+G +++ GHY L K N G W+EF+D HVS L
Sbjct: 434 DCQYELNAVCVHEGRSIDYGHYYTLAKAPN-GMWYEFNDSHVSRL 477
>gi|297712603|ref|XP_002832836.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 17-like
protein 7-like, partial [Pongo abelii]
Length = 236
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++ DD V+
Sbjct: 4 YPECLDMQPYMSQQNAGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYKMDDAEVT 62
Query: 71 NLG 73
G
Sbjct: 63 ASG 65
>gi|409083593|gb|EKM83950.1| hypothetical protein AGABI1DRAFT_51555, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 592
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T FP EL + + + D +Y+L A+++H G + GHYI+++K + G W
Sbjct: 339 KLTYRVTFPFELRLFNTVDDLENADRLYELFAIVVHLGNGPHHGHYISIVK--SVGSWLV 396
Query: 64 FDDEHVSNLGHHPFGE-------GSSSSGSKVV 89
FDD++V +P E G S+SGS V
Sbjct: 397 FDDDNV-----YPIPEVEIPKYFGDSNSGSAYV 424
>gi|403216854|emb|CCK71350.1| hypothetical protein KNAG_0G02930 [Kazachstania naganishii CBS
8797]
Length = 459
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 4 KITSPFCFPGELNMQRRLS--EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+ P FP L+M R + EP+ ++Y LS V+ H GT VN GHY A+++ N+G+W
Sbjct: 368 KLNDPVQFPLHLDMSRYCTGGEPTT-SIVYRLSGVVSHSGT-VNEGHYTAVLQ-LNSGEW 424
Query: 62 WEFDDEHVS 70
++F+D +S
Sbjct: 425 FKFNDSMIS 433
>gi|339898364|ref|XP_001465891.2| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
gi|321399532|emb|CAM68322.2| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
Length = 810
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
D Y+L+AV +H+G +++ GHY L K N G W+EF+D HVS L
Sbjct: 434 DCQYELNAVCVHEGRSIDYGHYYTLAKAPN-GMWYEFNDSHVSRL 477
>gi|326520702|dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 739
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 4 KITSPFCFPGELNMQRRL-SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
K+ P FP EL + R L S PS Y+L A + H G+ GHY A K + GQW
Sbjct: 653 KLYKPLHFPLELVLNRDLLSSPSSEGRRYELVATITHHGSGPARGHYTADAKRDG-GQWL 711
Query: 63 EFDDEHV 69
FDD HV
Sbjct: 712 RFDDGHV 718
>gi|326498139|dbj|BAJ94932.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
QL IYDL AVL HKG + +SGHY+ +K ++ G+W EFDD++ S
Sbjct: 402 QLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDNPS 445
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|339255776|ref|XP_003370631.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
gi|316965826|gb|EFV50494.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
Length = 330
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV++H G+ N GHYI ++K + G W
Sbjct: 230 KLSYRVLFPLELRLFNTSHDAVNPDRMYDLVAVVVHCGSTPNRGHYITVVKSQ--GFWLL 287
Query: 64 FDDEHVSNLGH 74
FDD+ V + H
Sbjct: 288 FDDDVVDKMDH 298
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|194225927|ref|XP_001917278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Equus
caballus]
Length = 897
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+I+S FP E L+++ L++ + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 581 EISSHVSFPLEGLDLRPFLAKECTSQITSYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 639
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 640 YEFDDQYVTEV 650
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 647 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 701
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 702 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 761
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW 349
C C ++ A R + L + + Y +S W ++W
Sbjct: 762 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREW 811
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 339 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 397
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 398 MNDSLVHSSNV 408
>gi|193785689|dbj|BAG51124.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 38 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 96
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 97 MNDSLVHSSNV 107
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|392570543|gb|EIW63715.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 923
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 10 CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL + + + D +Y+L A+++H GT + GHY+ +IK G W FDD+ V
Sbjct: 347 AFPLELRLFNTVDDAEDPDRLYELYAIVVHIGTGPHHGHYVTIIKAR--GTWMLFDDDTV 404
Query: 70 SNLGHH--PFGEGSSSSGSKVV 89
S + P G S+SGS V
Sbjct: 405 STIKESDIPKYFGESNSGSAYV 426
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|356525471|ref|XP_003531348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 2
[Glycine max]
Length = 383
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 283 KKLSYRVVFPLELKLSNTVEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 337
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 338 FFDDENV 344
>gi|157134980|ref|XP_001663386.1| hypothetical protein AaeL_AAEL013203 [Aedes aegypti]
gi|108870335|gb|EAT34560.1| AAEL013203-PB [Aedes aegypti]
Length = 1192
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 35/110 (31%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
+Y+L A++IH G+A + GHY A IKD N+ +W+ F+D+ VS
Sbjct: 514 VYELFAIMIHSGSA-SGGHYYAYIKDFNSSKWYSFNDQTVS------------------- 553
Query: 90 RSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMY 139
P+ + + G S YY+G+ +S +AYMLMY
Sbjct: 554 ---PITQDDIQKSFGGGT---------SKAYYSGAYS---SSTNAYMLMY 588
>gi|325183172|emb|CCA17629.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1589
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH----PFGEGSSSSG 85
+Y+L +VLIH G+A+ GHY A IK+ +W+ F+D HV+ + FG SSS+G
Sbjct: 467 VYELYSVLIHSGSALG-GHYYAYIKNFENEKWYNFNDAHVTEITEDDVSGAFGGQSSSNG 525
Query: 86 SKV-VRSEPVVC 96
++ RS C
Sbjct: 526 NRYGYRSNYTTC 537
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|388579867|gb|EIM20186.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 1110
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E++++ L + + + +Y L VL+H G ++ GHY ALIK E GQW
Sbjct: 415 KINDRHEFPLEIDLKEFLDDGPAKEENWVYRLHGVLVHSGD-LHGGHYFALIKPERDGQW 473
Query: 62 WEFDDEHVSNL 72
+FDD+ V+ +
Sbjct: 474 LKFDDDRVTKV 484
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Macaca mulatta]
Length = 529
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSFVKAPG-GQWYKMDDAKVT 355
>gi|355568976|gb|EHH25257.1| hypothetical protein EGK_09045 [Macaca mulatta]
Length = 1126
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 341 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 399
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 400 MNDSLVHSSNV 410
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+YDL VL+H G++ NSGHY +K TG W E DDE VS++
Sbjct: 379 VYDLYGVLVHAGSSSNSGHYYCFVKTA-TGTWCEMDDESVSSV 420
>gi|365986617|ref|XP_003670140.1| hypothetical protein NDAI_0E00810 [Naumovozyma dairenensis CBS 421]
gi|343768910|emb|CCD24897.1| hypothetical protein NDAI_0E00810 [Naumovozyma dairenensis CBS 421]
Length = 493
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
D+IY+L++++ HKGT VN GHYI ++K N GQW++F+D VS
Sbjct: 430 DMIYELTSIISHKGT-VNEGHYIVVVK-VNDGQWFKFNDSMVS 470
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 371 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 428
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 429 FDDDMVDKI 437
>gi|401422774|ref|XP_003875874.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492114|emb|CBZ27388.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 807
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 28 DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
D Y+L+AV +H+G +++ GHY L K N G W+EF+D HVS L
Sbjct: 431 DCQYELNAVCVHEGRSIDYGHYYTLAKAPN-GMWYEFNDSHVSRL 474
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ +P N+ +S+P+ Y+L VL+H G + SGHY + K N G W +
Sbjct: 345 KISKQISYPESFNLGPYMSDPN-CSCWYELIGVLVHAGGSTRSGHYYSFCKSSN-GVWLK 402
Query: 64 FDDEHVSN 71
FDD+ VSN
Sbjct: 403 FDDDFVSN 410
>gi|427785435|gb|JAA58169.1| Putative ubiquitin carboxyl-terminal hydrolase 20 [Rhipicephalus
pulchellus]
Length = 834
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 34/218 (15%)
Query: 168 FFNDDIFLPSHLGKDIKELNRSYL--------DGCEQFKLRKNRELDCISERKQEVRSLL 219
F + + +HL E + Y+ CE + L + + + R+ L+
Sbjct: 551 FGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCEAYVLFYRKSSEEMLNRRTRTYELM 610
Query: 220 SEAPVPSLEEP---FYWISSDWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK---- 272
S EP +++S W+ ++ P +DN C+HG V +K +
Sbjct: 611 ER----SRNEPGLLSFYVSKQWVNRFNTFAEPGPIDNGDFLCMHGGVQPAKAHIAEELCV 666
Query: 273 RISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSYRDRRK----SLKGLADD 328
++S W + GGPA T+ C TC + ++ RRK + L +
Sbjct: 667 QLSQSVWEYLHDSFGGGPACTHLYTCPTCASE-------QEALERRRKAELDTFITLNRE 719
Query: 329 VLSGKLVEGTYY-VSKSWLQQW---TRRKNLDAPSEAD 362
+ G Y VS +W +QW RRK+ +AP D
Sbjct: 720 FQQNQDSPGVVYAVSMAWFKQWEAFVRRKDTEAPGPID 757
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MKKKITSPFCFPGE-LNMQRRL-SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
KI+S FP E L+M L SE + YDL AV+ H GTA GHY +
Sbjct: 505 FSSKISSYVSFPLEGLDMAPFLHSECPRSATTYDLMAVICHHGTA-GFGHYTTYALNHLN 563
Query: 59 GQWWEFDDEHVSNL 72
QW+EFDD++V+++
Sbjct: 564 DQWYEFDDQYVTSV 577
>gi|355754426|gb|EHH58391.1| hypothetical protein EGM_08229 [Macaca fascicularis]
Length = 1130
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 341 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 399
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 400 MNDSLVHSSNV 410
>gi|344271628|ref|XP_003407639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Loxodonta
africana]
Length = 911
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP E L+++ L++ + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 595 KINNHVSFPLEGLDLRPFLAKECMSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 653
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 654 YEFDDQYVTEV 664
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 661 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 716 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 776 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 832
Query: 354 NLDAPSEADGGPTTSIR 370
+ + P D I+
Sbjct: 833 DSEPPGPIDNSRIAQIK 849
>gi|307180288|gb|EFN68321.1| Ubiquitin carboxyl-terminal hydrolase 46 [Camponotus floridanus]
Length = 327
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 228 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 285
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 286 FDDDMVDKI 294
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDS---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|67478714|ref|XP_654739.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471811|gb|EAL49353.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|449702725|gb|EMD43311.1| ubiquitin carboxylterminal hydrolase family protein [Entamoeba
histolytica KU27]
Length = 584
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KKI FP +LN+ + +D +YDL A+++H G SGHYI+ K +G W+
Sbjct: 266 KKINGKVAFPLQLNISK-----YGMDGLYDLYAIVVHLGKTKFSGHYISYCKTP-SGGWF 319
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 320 RFDDEEV 326
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + EP D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 272 KKLSYRVVFPLELKLSNTV-EPYA-DVEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 327
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 328 FFDDENV 334
>gi|297273759|ref|XP_001108648.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Macaca
mulatta]
Length = 1122
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 337 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 395
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 396 MNDSLVHSSNV 406
>gi|255085010|ref|XP_002504936.1| predicted protein [Micromonas sp. RCC299]
gi|226520205|gb|ACO66194.1| predicted protein [Micromonas sp. RCC299]
Length = 376
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP EL + + D Y L AV++H G+ N GHY+ L+K GQW
Sbjct: 249 KLMHRVVFPSELKIPNMTEDADGQDAAYQLFAVVVHVGSGPNHGHYVCLVKSH--GQWLT 306
Query: 64 FDDEHVSNLG----HHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGA 106
+DD+ V + ++ FG SG + ERV+GA
Sbjct: 307 YDDDTVELMDDDAMNNFFGSTQEHSGGNTEHGYIL----FYERVDGA 349
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + EP D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 272 KKLSYRVVFPLELKLSNTV-EPYA-DVEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 327
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 328 FFDDENV 334
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 567 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGHYISIVKSH--GFWLL 624
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 625 FDDDMVDKI 633
>gi|308474196|ref|XP_003099320.1| hypothetical protein CRE_09688 [Caenorhabditis remanei]
gi|308267459|gb|EFP11412.1| hypothetical protein CRE_09688 [Caenorhabditis remanei]
Length = 1271
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 2 KKKITSPFCFPGEL---NMQR---RLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
++K+ +P +P E+ QR + + PS+ YDL AV IH+G+ GHY LIK
Sbjct: 319 RQKLKTPMAYPREIPARAFQRTDLKNAPPSEF---YDLFAVTIHEGSNAECGHYYDLIKS 375
Query: 56 ENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRS 91
+W+ ++DE V ++ P G ++G KV +S
Sbjct: 376 PLNQKWYRYNDETVESIAKPP-GTDKPTTG-KVEKS 409
>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
dendrobatidis JAM81]
Length = 525
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+SP F LN+ +S+ ++ +++Y L AVL+H G + +SGHY +K + G W+
Sbjct: 302 KISSPVLFKTVLNLYPFMSQSTKQNVLYHLFAVLVHSGGSCHSGHYYCFVKAPD-GCWYL 360
Query: 64 FDDEHVSNL 72
+D V +
Sbjct: 361 MNDSLVQQV 369
>gi|119498903|ref|XP_001266209.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Neosartorya
fischeri NRRL 181]
gi|119414373|gb|EAW24312.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Neosartorya
fischeri NRRL 181]
Length = 1123
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS+ + IY L VL+H G +N+GHY A +K G W
Sbjct: 425 KINDRHAFPMEFDATPYLSDAADKSEPCIYQLHGVLVHSGD-LNAGHYYAFLKPTKDGHW 483
Query: 62 WEFDDEHVSN------LGHHPFGEGSSSSGSKVVR 90
++FDD+ V+ L + GE S+G+ VR
Sbjct: 484 YKFDDDRVTRATDKEVLEENYGGEYELSNGAAGVR 518
>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
Length = 367
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 268 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGHYISIVKSH--GFWLL 325
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 326 FDDDMVDKI 334
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A K E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYAKHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 256 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 313
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 314 FDDDMVDKI 322
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEP-SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KI P F EL++ +S+ Q +L Y L AVL+H G + +SGHY +++ + QW+
Sbjct: 423 KINRPIRFDEELDLSPFMSKGLPQQNLRYRLYAVLVHAGHSCHSGHYYCYVRNSDN-QWY 481
Query: 63 EFDDEHVS 70
E +D HVS
Sbjct: 482 EMNDSHVS 489
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 254 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 311
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 312 FDDDMVDKI 320
>gi|367027380|ref|XP_003662974.1| hypothetical protein MYCTH_2304264 [Myceliophthora thermophila ATCC
42464]
gi|347010243|gb|AEO57729.1| hypothetical protein MYCTH_2304264 [Myceliophthora thermophila ATCC
42464]
Length = 2573
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 2 KKKITSPFCFPGELNMQ----RRLSEPSQ--LDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
+ KI F FP +++M+ LS P+Q L+ I++L VL+H GTA SGHY + I++
Sbjct: 1838 RSKINDYFSFPDKIDMRPYTIEHLSNPNQEQLEDIFELVGVLVHTGTA-ESGHYYSYIRE 1896
Query: 56 E----NTGQWWEFDDEHVS 70
+T W EF+DE V+
Sbjct: 1897 RPTLGDTQTWVEFNDETVT 1915
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P LN++ +S+PS + Y L AVL+H G+ GHY + +K N G W++
Sbjct: 307 KIAKIVKYPEHLNIRAYMSQPSGEAMQYSLYAVLVHTGSKCCVGHYFSYVKASN-GLWYQ 365
Query: 64 FDDEHVS 70
+D VS
Sbjct: 366 MNDFMVS 372
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 255 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 312
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 313 FDDDMVDKI 321
>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
Length = 379
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 280 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGHYISIVKSH--GFWLL 337
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 338 FDDDMVDKI 346
>gi|392573476|gb|EIW66616.1| hypothetical protein TREMEDRAFT_72397 [Tremella mesenterica DSM
1558]
Length = 1111
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 62/238 (26%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLI--YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L + + + Y L VL+H G ++ GHY ALIK E G+W
Sbjct: 413 KINDRHEFPFEIDLAEFLEDSADRSVSHNYKLHGVLVHSGD-LHGGHYFALIKPEKDGRW 471
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++FDD+ V+ PV + V E G + ++ +P +
Sbjct: 472 FKFDDDRVT----------------------PVTDKEVLEDNFGG--DMINGVIPQHQRA 507
Query: 122 NGSNVERFTSNDAYMLMY--------------------------NLRRDKEDSKRKDVVH 155
+++FT +AYML+Y + R++ ++KR++
Sbjct: 508 QARTLKKFT--NAYMLVYIRETELDTVMAPFTEADTPPHLKARLDAEREQLEAKRRE--K 563
Query: 156 DVNNMEIESEMIFFNDDIFLPSHLGKDIKELNRSYLDGCE--QFKLRKNRELDCISER 211
D ++ + +++I D+IF H G D+ + L E F++ KN +R
Sbjct: 564 DEQHLYLTAKVI--TDEIF-SRHQGFDLASFDDKNLPATELPTFRVLKNETYSVFKQR 618
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 270 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 327
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 328 FDDDMVDKI 336
>gi|254577285|ref|XP_002494629.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
gi|238937518|emb|CAR25696.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
Length = 465
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
FP LNM+ D+I++L ++ H+GT VN GHYIA K TG W++F+D VS
Sbjct: 385 FPLFLNMRNYCDGDDVPDIIFELIGIIAHRGT-VNEGHYIAFTK-VTTGHWFKFNDSMVS 442
Query: 71 NL 72
++
Sbjct: 443 SI 444
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 255 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 312
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 313 FDDDMVDKI 321
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 255 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 312
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 313 FDDDMVDKI 321
>gi|452823341|gb|EME30352.1| ubiquitin carboxyl-terminal hydrolase 7 [Galdieria sulphuraria]
Length = 1133
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 1 MKKKITSPFCFPGELNMQRRLS-----EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
M KI + F +N+ +S EPS +D YDL AVL+H G + GHY A I+
Sbjct: 332 MMVKINDHYKFYETINLNSFVSREESMEPSNVDYTYDLHAVLVHMGD-IYGGHYYAFIRP 390
Query: 56 ---ENTGQWWEFDDEHV-SNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-NH 110
++ W++FDD+ V + H E G K+ E + + N
Sbjct: 391 HLLQDPDGWYKFDDDLVLKSDRHQAIEENFGVGGQKIAPEEEKEQEERDRKSRTLNGLTP 450
Query: 111 VDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMI 167
++ P S S V +F +AYML Y +RRD K +D + + + E+ E+I
Sbjct: 451 PELQPPRS---RQSMVRKFA--NAYMLQY-IRRD----KIQDYLTPLKDAEVPHELI 497
>gi|158285368|ref|XP_308272.4| AGAP007600-PA [Anopheles gambiae str. PEST]
gi|157019958|gb|EAA03924.4| AGAP007600-PA [Anopheles gambiae str. PEST]
Length = 1227
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 27 LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+D YDL AV H+G + +GHY A K+ GQW+ FDD+ VS++
Sbjct: 748 MDNRYDLYAVCYHQGDTLETGHYTAACKNPYDGQWYRFDDQRVSHV 793
>gi|426358881|ref|XP_004046718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Gorilla gorilla gorilla]
Length = 414
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G ++GHY + +K + GQW++
Sbjct: 174 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWICHNGHYFSYVKAQE-GQWYK 232
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 233 MDDAEVTASG 242
>gi|7023915|dbj|BAA92128.1| unnamed protein product [Homo sapiens]
gi|15488874|gb|AAH13567.1| USP48 protein [Homo sapiens]
Length = 254
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 152 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 211
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 212 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 251
>gi|47230431|emb|CAF99624.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1304
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 16 NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
N R+ +P L L ++L +V++H G+A GHY A IK + GQW+ F+D+HVS +
Sbjct: 388 NNADRMLKPKSL-LTFELFSVMVHSGSAAG-GHYYAHIKSFSDGQWYSFNDQHVSKI 442
>gi|302697379|ref|XP_003038368.1| hypothetical protein SCHCODRAFT_63953 [Schizophyllum commune H4-8]
gi|300112065|gb|EFJ03466.1| hypothetical protein SCHCODRAFT_63953, partial [Schizophyllum
commune H4-8]
Length = 425
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP EL + + + + D +++L A+++H G + GHYI++IK G W
Sbjct: 336 KLAYRVAFPFELRLFNTVDDMDEPDRLFNLFAIVVHIGAGPHHGHYISIIK--TLGTWLV 393
Query: 64 FDDEHVSNLGHH--PFGEGSSSSGSKVV 89
FDD++V + P G SS+GS V
Sbjct: 394 FDDDNVYPISESEIPKYYGDSSAGSAYV 421
>gi|242006825|ref|XP_002424245.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212507614|gb|EEB11507.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 344
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 244 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 301
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 302 FDDDMVDKI 310
>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 281 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGHYISIVKSH--GFWLL 338
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 339 FDDDMVDKI 347
>gi|303282773|ref|XP_003060678.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458149|gb|EEH55447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 376
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 3 KKITSPFCFPGEL---NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTG 59
KK+ FP EL NM+ L P D Y L AV++H G+ N GHY+ L+K G
Sbjct: 249 KKLMHRVVFPDELKLNNMEDDL--PGTPDAAYGLFAVVVHVGSGPNHGHYVCLVKSH--G 304
Query: 60 QWWEFDDEHV 69
QW +DD+ V
Sbjct: 305 QWLTYDDDDV 314
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KLAKNVHYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
Length = 530
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYKMDDAEVT 355
>gi|357163877|ref|XP_003579876.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Brachypodium distachyon]
Length = 368
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMELKIS---STSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 324
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 325 FFDDENV 331
>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like, partial [Gorilla gorilla gorilla]
Length = 387
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ L+Y L AVL+H G + ++GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQITGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYKMDDAEVT 355
Query: 71 NLG 73
G
Sbjct: 356 ASG 358
>gi|340378323|ref|XP_003387677.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 7-like [Amphimedon
queenslandica]
Length = 1113
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI + FP L++ L P Y L AVL+H G GHY+A I G+W +
Sbjct: 438 KINDRYEFPEHLDLNEYLKAPEGSPAHYTLHAVLVHSGDNF-GGHYVAYINPHGDGKWLK 496
Query: 64 FDDEHVS 70
FDDE VS
Sbjct: 497 FDDEVVS 503
>gi|323454240|gb|EGB10110.1| hypothetical protein AURANDRAFT_62666 [Aureococcus anophagefferens]
Length = 4400
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 28/123 (22%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS-----NLGHHPFGEGSSS 83
++YDL V++H G NSGHY + ++ E G W+EF+D HV+ +LG FG
Sbjct: 2422 VLYDLGGVVVHSGNC-NSGHYYSFVR-EQGGDWFEFNDAHVAPFDARDLGAECFGG---- 2475
Query: 84 SGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNLRR 143
+EP R A +D P + G ++R + +A++L+Y+ R
Sbjct: 2476 -------AEP--------RAPAARGGGLDELRPFAN--GGPQLQRERTRNAFLLVYHRRG 2518
Query: 144 DKE 146
K+
Sbjct: 2519 SKQ 2521
>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
Length = 353
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 254 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISIVKSH--GFWLL 311
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 312 FDDDMVDKI 320
>gi|226509912|ref|NP_001148768.1| ubiquitin carboxyl-terminal hydrolase 6 [Zea mays]
gi|195622016|gb|ACG32838.1| ubiquitin carboxyl-terminal hydrolase 6 [Zea mays]
gi|223945733|gb|ACN26950.1| unknown [Zea mays]
gi|414881895|tpg|DAA59026.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 478
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
QL +YDL AVL HKG + +SGHY+ +K ++ G+W EFDD++
Sbjct: 402 QLTGVYDLVAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDN 443
>gi|123488692|ref|XP_001325220.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121908116|gb|EAY12997.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1039
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+KKITS + F +L+M + +E D Y+ AV++H+GT ++ GHY ++ W
Sbjct: 375 QKKITSKYEFYQDLDMSQYTTETK--DTEYEAFAVVVHRGTKMDDGHYYVFVRSPGHYDW 432
Query: 62 WEFDDEHVS 70
+FDD +VS
Sbjct: 433 VKFDDYNVS 441
>gi|123414377|ref|XP_001304482.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121885936|gb|EAX91552.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1106
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 4 KITSPFCFPGELNMQRRLSEPS---QLDLIYDLSAVLIHKGTAVNSGHYIALIK-DENTG 59
KI S F FP +++ L+E S IY L VL+H GT VN GHY A ++ N
Sbjct: 384 KIDSRFEFPESIDLNEFLAENSDQKNSSQIYSLFGVLVHSGT-VNYGHYCAFLRTSSNDP 442
Query: 60 QWWEFDDEHVSNLGHHP-----FGEGSSSSGSKVV 89
QW+EF+D V + +G S+ SG ++
Sbjct: 443 QWYEFNDTCVQKVSKEKAVDDNYGGASNFSGYYLI 477
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L+++ +S+ +Y L AVL+H G + ++GHY IK N GQW++
Sbjct: 244 KITKDVKYPEYLDLRPFMSQSQGEPQVYGLYAVLVHSGFSCHAGHYFCYIKASN-GQWYQ 302
Query: 64 FDDEHVS 70
+D VS
Sbjct: 303 MNDSSVS 309
>gi|384497193|gb|EIE87684.1| hypothetical protein RO3G_12395 [Rhizopus delemar RA 99-880]
Length = 551
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+T FP EL + + D +Y+L +++IH G+ + GHY+A++K + GQW
Sbjct: 370 KLTYRVVFPFELRLFNTSDDTEDADRMYELWSIVIHIGSGPHHGHYVAIVK--SNGQWML 427
Query: 64 FDDEHVSNL 72
FDD+ V+ +
Sbjct: 428 FDDDVVTQI 436
>gi|353236423|emb|CCA68418.1| hypothetical protein PIIN_02282 [Piriformospora indica DSM 11827]
Length = 1157
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNS---GHYIALIKDENTGQ 60
K++ FP EL + + + + +D +Y+L A+++H G + GHYI +IK + G
Sbjct: 489 KLSYRVAFPFELRLFNTVDDAADMDRLYELWAIVVHIGGVYSGPLHGHYITIIKSQ--GS 546
Query: 61 WWEFDDEHV-----SNLGHHPFGEGSSSSG 85
W FDDE V S++ + FGEG S +G
Sbjct: 547 WQVFDDESVETIRESDIPKY-FGEGGSGTG 575
>gi|452822703|gb|EME29720.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Galdieria sulphuraria]
Length = 444
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP +L + + D +Y L AV+IH G+ N GHY+ LIK + G+W
Sbjct: 342 KKLSYRVVFPLQLRLFNVSEDAEDPDRLYSLVAVVIHVGSGPNHGHYVCLIK--SYGRWI 399
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 400 LFDDECV 406
>gi|414881896|tpg|DAA59027.1| TPA: hypothetical protein ZEAMMB73_534205 [Zea mays]
Length = 483
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
QL +YDL AVL HKG + +SGHY+ +K ++ G+W EFDD++
Sbjct: 402 QLTGVYDLVAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDN 443
>gi|324500938|gb|ADY40425.1| Ubiquitin carboxyl-terminal hydrolase 48 [Ascaris suum]
Length = 784
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ S +P L + + YD+ AV+IH+G +SGHY LIK +GQW
Sbjct: 312 KKKVQSALQYPRVLEI---------CGVTYDICAVMIHEGPNADSGHYYDLIKHPVSGQW 362
Query: 62 WEFDDEHV 69
+ ++D V
Sbjct: 363 FTYNDARV 370
>gi|281201291|gb|EFA75503.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 643
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ P F LN+ ++ + D++YDL VL+H G++ NSGHY K ++G W
Sbjct: 331 KISKPVQFDPVLNLTPYMTTSTN-DVVYDLYGVLVHAGSSTNSGHYYCYTK-SSSGVWHG 388
Query: 64 FDDEHVS 70
+DE VS
Sbjct: 389 LNDESVS 395
>gi|340385691|ref|XP_003391342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like, partial
[Amphimedon queenslandica]
Length = 214
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + S D +YDL V+IH GT N GHYI++IK G W
Sbjct: 150 KLSHRVVFPWELKLFNTSDDASDPDRMYDLIGVVIHCGTGPNRGHYISVIKSH--GYWLL 207
Query: 64 FDDEHV 69
DD++V
Sbjct: 208 LDDDYV 213
>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
sapiens]
gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
10
Length = 530
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYSSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|166240229|ref|XP_635735.2| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988494|gb|EAL62242.2| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 475
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP E+ +Q S + D ++L AV+IH G+ N GHY +LIK G W+
Sbjct: 372 KLNYRVVFPFEIIIQNTTSNIDEPDKKFNLFAVVIHVGSGPNHGHYYSLIKCH--GVWFV 429
Query: 64 FDDEHV 69
FDD H+
Sbjct: 430 FDDHHI 435
>gi|72387303|ref|XP_844076.1| ubiquitin hydrolase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360235|gb|AAX80653.1| ubiquitin hydrolase, putative [Trypanosoma brucei]
gi|70800608|gb|AAZ10517.1| ubiquitin hydrolase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261327224|emb|CBH10200.1| cysteine peptidase, Clan CA, family C19,putative [Trypanosoma
brucei gambiense DAL972]
Length = 731
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
Y L A++ H G + +GHY+ I+DE TG+W F+DE V+ PF S
Sbjct: 670 YRLHAMISHMGASAKTGHYVCHIRDEETGKWLLFNDEKVAESKQPPFALAS 720
>gi|406607319|emb|CCH41374.1| putative ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces
ciferrii]
Length = 474
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDE-NTGQWWEFDDEHVS 70
IY+L+A++ H+G++ +SGHY A +KD+ + +WW F+D+ +S
Sbjct: 403 IYNLNAIITHQGSSADSGHYQAFVKDKFDDNKWWRFNDDKIS 444
>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
troglodytes]
Length = 530
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|242053275|ref|XP_002455783.1| hypothetical protein SORBIDRAFT_03g025180 [Sorghum bicolor]
gi|241927758|gb|EES00903.1| hypothetical protein SORBIDRAFT_03g025180 [Sorghum bicolor]
Length = 477
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
QL +YDL AVL HKG + +SGHY+ +K ++ G+W EFDD++
Sbjct: 401 QLTGVYDLVAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDN 442
>gi|402911939|ref|XP_003918556.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 409
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G ++GHY++ +K GQW++ DD V+
Sbjct: 177 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPG-GQWYKMDDAEVT 235
>gi|320165578|gb|EFW42477.1| ubiquitin specific peptidase 12 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLD-LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
+K+ FP EL RL E S D YDL ++++H G+ N GHYIA++K G W
Sbjct: 311 RKLHHRVAFPLEL----RLFETSDEDSAFYDLVSIVVHVGSGPNRGHYIAIVKSH--GYW 364
Query: 62 WEFDDEHV 69
FDD++V
Sbjct: 365 LSFDDDYV 372
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQLD---LIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP D +YDL+AV++H G+ V SGHY A E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|62319392|dbj|BAD94710.1| ubiquitin-specific protease 6 [Arabidopsis thaliana]
Length = 147
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 25 SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+ + IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 72 THMTGIYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 116
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ +G+W+ FDD +VS
Sbjct: 817 LNMSEFVCDPSAQPYVYDLIAVSNHYG-AMGVGHYTAYAKNKFSGKWYYFDDSNVS 871
>gi|426363284|ref|XP_004048773.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Gorilla gorilla gorilla]
Length = 922
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
YDL +V+ H GTA SGHYIA ++ GQW+EFDD++V+ +
Sbjct: 635 YDLLSVICHHGTA-GSGHYIAYCQNVINGQWYEFDDQYVTEV 675
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 672 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 726
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 727 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 786
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 787 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 843
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 844 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 884
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 274 KLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 331
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 332 FDDDIVEKIDAQAIEEFYGLTSDISK 357
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L+++ +S+ +Y L AVL+H G + ++GHY IK N GQW++
Sbjct: 298 KITKDVKYPEYLDLRPFMSQSQGEPQVYGLYAVLVHSGFSCHAGHYFCYIKASN-GQWYQ 356
Query: 64 FDDEHVS 70
+D VS
Sbjct: 357 MNDSSVS 363
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 275 KLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 332
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 333 FDDDIVEKIDAQAIEEFYGLTSDISK 358
>gi|332819099|ref|XP_001175011.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 [Pan
troglodytes]
Length = 354
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 183 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 241
Query: 64 FDDEHVS 70
DD V+
Sbjct: 242 MDDAEVT 248
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 286 KLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 343
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 344 FDDDIVEKIDAQAIEEFYGLTSDISK 369
>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
Length = 491
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
L+MQ +SE ++ L+Y L AVLIH G+ +SGHY + +K + G+W++ +D V+
Sbjct: 260 LDMQPYMSEQNRGPLLYTLYAVLIHAGSTCHSGHYFSYVKAGD-GRWYQMNDNKVT 314
>gi|255955745|ref|XP_002568625.1| Pc21g16180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590336|emb|CAP96515.1| Pc21g16180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1109
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 83/207 (40%), Gaps = 60/207 (28%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
M K+ FP E + LSE + +Y L VL+H G +++GHY A +K
Sbjct: 422 MMAKVNDYHSFPMEFDAAPYLSESADKSESWVYQLHGVLVHSGN-LDAGHYYAFLKPTKD 480
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSS 118
G W+ FDD+ V+ + E +EN+ D S
Sbjct: 481 GHWYRFDDDRVNR----------------------------ATDKEVLDENYGD----SQ 508
Query: 119 EYYNGS-NVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPS 177
+ NG+ +N+AYML+Y +R+ ++D+ V DD+ PS
Sbjct: 509 QRTNGTGGRSAMRTNNAYMLVY-IRKTRQDNVLLPVA---------------KDDV--PS 550
Query: 178 HLGKDIKELNRSYLDGCEQFKLRKNRE 204
H+ K + E D E + +K RE
Sbjct: 551 HIEKRMTE------DRAEMLRRKKERE 571
>gi|413950339|gb|AFW82988.1| hypothetical protein ZEAMMB73_925418 [Zea mays]
Length = 616
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
F LN QL +YDL AVL HKG + +SGHY+ +K ++ G+W EFDD++
Sbjct: 525 FARVLNAAESSLPKKQLTGVYDLVAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDN 581
>gi|395506252|ref|XP_003757449.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Sarcophilus harrisii]
Length = 908
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSEP--SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S F E L++Q L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 592 KINSHVSFSLEGLDLQPFLAKECVSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 649
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 650 WYEFDDQYVTEV 661
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+ V L+ PSL + ++IS +WL
Sbjct: 658 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQHVVS--LATMKEPSLLQ--FYISREWLN 712
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 713 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEYLYNRFGGGPAVNHLY 772
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 773 VCSVCQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 829
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ D P D I+ G + GA + E W ++
Sbjct: 830 DNDPPGPIDNSKIALIK---GGGHIQVKQGADYGQISEETWTYL 870
>gi|159126058|gb|EDP51174.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Aspergillus
fumigatus A1163]
Length = 1120
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS+ + IY L VL+H G +N+GHY A +K G W
Sbjct: 422 KINDRHAFPMEFDATPYLSDAADKSEPWIYQLHGVLVHSGD-LNAGHYYAFLKPTKDGHW 480
Query: 62 WEFDDEHVSN------LGHHPFGEGSSSSGSKVVR 90
++FDD+ V+ L + GE S+G+ VR
Sbjct: 481 FKFDDDRVTRATDKEVLEENYGGEYELSNGAAGVR 515
>gi|70985024|ref|XP_748018.1| ubiquitin C-terminal hydrolase (HAUSP) [Aspergillus fumigatus
Af293]
gi|66845646|gb|EAL85980.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Aspergillus
fumigatus Af293]
Length = 1123
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS+ + IY L VL+H G +N+GHY A +K G W
Sbjct: 425 KINDRHAFPMEFDATPYLSDAADKSEPWIYQLHGVLVHSGD-LNAGHYYAFLKPTKDGHW 483
Query: 62 WEFDDEHVSN------LGHHPFGEGSSSSGSKVVR 90
++FDD+ V+ L + GE S+G+ VR
Sbjct: 484 FKFDDDRVTRATDKEVLEENYGGEYELSNGAAGVR 518
>gi|12321670|gb|AAG50872.1|AC025294_10 tRNA-guaninine transglycosylase, putative [Arabidopsis thaliana]
Length = 490
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 420 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 459
>gi|11993465|gb|AAG42751.1|AF302660_1 ubiquitin-specific protease 6 [Arabidopsis thaliana]
Length = 482
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 412 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 451
>gi|297852896|ref|XP_002894329.1| ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]
gi|297340171|gb|EFH70588.1| ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]
Length = 482
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 412 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 451
>gi|18403643|ref|NP_564596.1| ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]
gi|75306311|sp|Q949Y0.1|UBP6_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 6; AltName:
Full=Deubiquitinating enzyme 6; Short=AtUBP6; AltName:
Full=Ubiquitin thioesterase 6; AltName:
Full=Ubiquitin-specific-processing protease 6
gi|15292767|gb|AAK92752.1| putative ubiquitin-specific protease UBP6 [Arabidopsis thaliana]
gi|21281163|gb|AAM45129.1| putative ubiquitin-specific protease UBP6 [Arabidopsis thaliana]
gi|21536963|gb|AAM61304.1| ubiquitin-specific protease UBP6, putative [Arabidopsis thaliana]
gi|23397039|gb|AAN31805.1| putative ubiquitin-specific protease 6 (UBP6) [Arabidopsis
thaliana]
gi|332194584|gb|AEE32705.1| ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]
Length = 482
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 412 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 451
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 263 KLDRKVSYPEFLDLKPYLSEPTGGPLPYTLYAVLVHDGATSHSGHYFCCVK-AGHGKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDTKVT 328
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 277 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 334
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 335 FDDDIVEKIDAQAIEEFYGLTSDISK 360
>gi|451996282|gb|EMD88749.1| hypothetical protein COCHEDRAFT_1196677 [Cochliobolus heterostrophus
C5]
Length = 1059
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKV 88
+Y+ AV+ H G + SGHYIA +KD++ G W F+D+ + H F G+ + S++
Sbjct: 985 FVYNAYAVIWHIGATLGSGHYIAFVKDKSRGCWRSFNDDKI-----HDFDPGNLPANSRL 1039
Query: 89 VRSEPVVCQPVSERVEGA 106
+ + ERV G
Sbjct: 1040 QNEKAYIVFYERERVAGG 1057
>gi|145324903|ref|NP_001077698.1| ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]
gi|332194585|gb|AEE32706.1| ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]
Length = 443
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 373 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 412
>gi|116207252|ref|XP_001229435.1| hypothetical protein CHGG_02919 [Chaetomium globosum CBS 148.51]
gi|88183516|gb|EAQ90984.1| hypothetical protein CHGG_02919 [Chaetomium globosum CBS 148.51]
Length = 2308
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 2 KKKITSPFCFPGELNMQ----RRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIK--- 54
+ KI F FP +++M+ LS P + + I++L VL+H GTA SGHY + I+
Sbjct: 1616 RSKINDYFAFPDKIDMRPYTIDHLSNPGEDEDIFELVGVLVHTGTA-ESGHYYSYIRERP 1674
Query: 55 -DENTGQWWEFDDEHVS 70
D + W EF+DE V+
Sbjct: 1675 TDTDAQTWVEFNDETVT 1691
>gi|344257555|gb|EGW13659.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 306
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+++ +S+ ++ L+Y L AVL+H G +SGHY ++ N G+W++ DD V+
Sbjct: 155 YPESLDLRPYMSQSNRGPLVYALYAVLVHAGATCHSGHYFCYVRAGN-GKWYKMDDSTVT 213
>gi|348560035|ref|XP_003465820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 435
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P LN++ +S+PS + Y L AVL+H G+ GHY + +K N G W++
Sbjct: 276 KIAKIVKYPEHLNIRAYMSQPSGEAMQYSLYAVLVHTGSKCCVGHYFSYVKASN-GLWYQ 334
Query: 64 FDDEHVS 70
+D VS
Sbjct: 335 MNDFMVS 341
>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 17-like protein 2; AltName:
Full=Ubiquitin thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 530
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + + GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQE-GQWYKMDDAKVT 355
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 9 FCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
+C GE ++ + D+IY+L ++ H+GT VN GHYIA K GQW++F+D
Sbjct: 391 YCSKGESESEKHIGNGKVPDIIYELIGIVSHRGT-VNEGHYIAFCKISG-GQWFKFNDSM 448
Query: 69 VSNL 72
VS++
Sbjct: 449 VSSI 452
>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
Length = 377
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV++H G+ N GHYI+++K G W
Sbjct: 277 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVVHCGSGPNRGHYISIVKSH--GFWLL 334
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 335 FDDDMVDKI 343
>gi|167387647|ref|XP_001738248.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Entamoeba dispar
SAW760]
gi|165898621|gb|EDR25439.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Entamoeba
dispar SAW760]
Length = 585
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KKI FP +LN+ + +D +YDL A+++H G SGHYI+ K +G W+
Sbjct: 267 KKINGKVTFPLQLNISK-----YGVDGLYDLYAIVVHLGKTKFSGHYISYCKTP-SGGWF 320
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 321 RFDDEEV 327
>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|349603576|gb|AEP99377.1| Ubiquitin carboxyl-terminal hydrolase-like protein, partial [Equus
caballus]
Length = 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 132 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 188
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 189 KFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 248
Query: 297 YCMTC 301
C TC
Sbjct: 249 ICHTC 253
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP E L++Q L++ S ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 68 KINTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 126
Query: 62 WEFDDEHVS 70
+EFDD+ V+
Sbjct: 127 YEFDDQSVT 135
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L ++ +S+ + Y L+AVL+H G + NSGHY +++ N G W+
Sbjct: 390 KITKHVSYPEHLELRPYMSDKHGDPVTYRLNAVLVHLGASCNSGHYFCYVRNSN-GSWYC 448
Query: 64 FDDEHVSNL 72
DD V +
Sbjct: 449 MDDSRVHQV 457
>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
sapiens]
gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
3; AltName: Full=Deubiquitinating enzyme 17-like protein
3; AltName: Full=Ubiquitin thioesterase 17-like protein
3; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 3
Length = 530
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + + GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQE-GQWYKMDDAEVT 355
>gi|413918516|gb|AFW58448.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 490
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 392 KKLSYRVVFPMEL----KLSNSSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 445
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 446 LFFDDENV 453
>gi|297303100|ref|XP_002806114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Macaca mulatta]
Length = 347
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 196 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPG-GQWYKMDDAEVT 254
>gi|123455815|ref|XP_001315648.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121898331|gb|EAY03425.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1205
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI F FP EL++ L++ + IYDL VL+H G ++ GHY A ++ QW
Sbjct: 494 KINDYFEFPAELDLGEFLAKDADHSKSNIYDLYGVLVHSGGSM-CGHYYAFLRISQDPQW 552
Query: 62 WEFDDEHVSNLG 73
++FDD++V+ +
Sbjct: 553 YKFDDQNVTKVS 564
>gi|32563709|ref|NP_492524.2| Protein USP-48 [Caenorhabditis elegans]
gi|25809230|emb|CAB03026.2| Protein USP-48 [Caenorhabditis elegans]
Length = 1262
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 2 KKKITSPFCFPGEL---NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
++K+ +P +P E+ QR + +YDL AV IH+G GHY LIK
Sbjct: 317 RQKLKTPMAYPREIPAKAFQRTNNSIPPPAEMYDLFAVTIHEGNNAECGHYYDLIKSPLN 376
Query: 59 GQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
+W+ ++DE V + P E +++ ++ R
Sbjct: 377 QKWYRYNDETVEAIPKPPGTEKPTTAKTEKSR 408
>gi|66801727|ref|XP_629788.1| hypothetical protein DDB_G0292046 [Dictyostelium discoideum AX4]
gi|60463186|gb|EAL61379.1| hypothetical protein DDB_G0292046 [Dictyostelium discoideum AX4]
Length = 3240
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL-----------GHHPFGE 79
Y LS +++H+GTA +SGHY LIKD G W+E +D V G F E
Sbjct: 2503 YSLSGIVLHQGTA-DSGHYFTLIKDSTNGNWFELNDTLVQPYDPNRIPYDCFGGFEEFRE 2561
Query: 80 GSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSE 119
+ ++ P C N N+ D ++ S E
Sbjct: 2562 IDKETQKPIMVRRPKTCNAYMLFYSKVNTNYGDNNIASLE 2601
>gi|432943694|ref|XP_004083239.1| PREDICTED: ubl carboxyl-terminal hydrolase 18-like [Oryzias
latipes]
Length = 337
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEP-----SQLDLIYDLSAVLIHKGTAVNSGHYIALIKD 55
+ +K+ S FP L+M + L+E +Q D + L AV++H GTA+ GHY A ++D
Sbjct: 225 LLQKLHSRVTFPEHLDMAQILTEAFSTDFAQSDCKFSLYAVVVHYGTAM-FGHYTAYVRD 283
Query: 56 ENTGQWWEFDDEHV 69
+G W+ DD V
Sbjct: 284 RRSGSWYHADDSCV 297
>gi|405953364|gb|EKC21042.1| Ubiquitin carboxyl-terminal hydrolase 47 [Crassostrea gigas]
Length = 1245
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH----PFGEGSSSSG 85
+Y+L ++++H G+A GHY A IK G+W+ F+D+HVS + + +G S+S G
Sbjct: 491 VYELFSIMVHSGSAA-GGHYYAYIKSFKDGEWYSFNDQHVSKVTYEDITKTYGGSSTSRG 549
>gi|151556803|gb|AAI48870.1| USP12P1 protein [Bos taurus]
Length = 144
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 47 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 104
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSKVVRSEPVV 95
FDD+ V + E G +S SK+ S ++
Sbjct: 105 FDDDIVEKIDAQAIEEFYGLTSDISKISESGYIL 138
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 263 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSHSGHYFCCVK-AGHGKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDTKVT 328
>gi|389748953|gb|EIM90130.1| ubiquitin carboxyl-terminal hydrolase 5 [Stereum hirsutum FP-91666
SS1]
Length = 1109
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L E + +Y L VL+H G ++ GHY ALIK +N +W
Sbjct: 410 KINDRHEFPFEIDLDEFLDETADRSSPWVYKLHGVLVHSGD-LHGGHYFALIKPDNDTRW 468
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+FDD+ V+ PV + V E G ++ +P+ +
Sbjct: 469 LKFDDDRVT----------------------PVTDREVLEENYGGEA--LNGVVPTLQRN 504
Query: 122 NGSNVERFTSNDAYMLMY 139
+++RFT +AYML+Y
Sbjct: 505 QARSMKRFT--NAYMLVY 520
>gi|195583324|ref|XP_002081472.1| GD11032 [Drosophila simulans]
gi|194193481|gb|EDX07057.1| GD11032 [Drosophila simulans]
Length = 1033
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + C+ + L ++ + + E +L + P+ + FY I+S+WL +
Sbjct: 520 VTEVSSEVVQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHPLCDSDIQFY-ITSEWLSRL 578
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
A P ++N + C HG + SK + + IS W+ + + GGPA+ C
Sbjct: 579 ATFSEPGPINNQEMLCPHGGILHSKADVISQIAVPISQPLWDYLYRTFGGGPAVNIIFEC 638
Query: 299 MTCLIDGAHTVVCADSYR-DRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDA 357
C A T+ Y + GL ++ S + Y ++ WL+ W +
Sbjct: 639 EICK-RAAETLSRRQQYELNEFTKYNGLQNEFDSTAI----YAIAMPWLRSWQQFSR--G 691
Query: 358 PSEADGGPTTS 368
+ D GP T+
Sbjct: 692 KTHKDPGPITN 702
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDL-IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E +M+ + + + ++ IY+LS+V+ H GT V GHY ++ G+W
Sbjct: 454 KISSDVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICHHGT-VGGGHYTCFARNALNGKW 512
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 513 YEFDDQFVTEV 523
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 263 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSHSGHYFCCVK-AGHGKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDTKVT 328
>gi|426358879|ref|XP_004046717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 407
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+MQ +S+ + L+Y L AVL+H G + +S HY++ +K + GQW++
Sbjct: 167 KLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHSRHYLSYVKAQE-GQWYK 225
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 226 MDDAEVTASG 235
>gi|168032240|ref|XP_001768627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680126|gb|EDQ66565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1098
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 4 KITSPFCFPGELNMQRR----LSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDEN 57
K+ + FP +L++ + LS + + +Y L +VL+H G V GHY A I+
Sbjct: 386 KVNDRYEFPLQLDLDKYDGKYLSPDADRSVRNLYSLHSVLVHSG-GVQGGHYYAFIRPTL 444
Query: 58 TGQWWEFDDEHVS 70
T QW++FDDEHV+
Sbjct: 445 TNQWYKFDDEHVT 457
>gi|238883868|gb|EEQ47506.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 598
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI S FP LN+ S + D IY L AV+ H+G ++N+GHY IK N G W++
Sbjct: 517 KIQSHINFPLFLNV-TEYSVINDTDYIYQLFAVVCHQG-SINTGHYTVFIK--NNGNWYK 572
Query: 64 FDDEHVS 70
FDD V+
Sbjct: 573 FDDSVVT 579
>gi|397602726|gb|EJK58247.1| hypothetical protein THAOC_21653, partial [Thalassiosira oceanica]
Length = 2247
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 21 LSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
L+ +D Y L+ VL+H G A GHY + IKD ++ QW++FDDE V+
Sbjct: 1185 LASLPDVDYEYRLAGVLVHAGVA-QGGHYYSFIKDRSSAQWYKFDDEDVT 1233
>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
mulatta]
Length = 626
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 529 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 586
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 587 FDDDIVEKI 595
>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
Length = 370
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 382 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 439
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 440 FDDDIVEKI 448
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 402 LRNKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE 461
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 462 --GRWFHFNDSTVT 473
>gi|170051523|ref|XP_001861802.1| ubiquitin carboxyl-terminal hydrolase 7 [Culex quinquefasciatus]
gi|167872739|gb|EDS36122.1| ubiquitin carboxyl-terminal hydrolase 7 [Culex quinquefasciatus]
Length = 1106
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 43/163 (26%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K F F ++N+ L +P Y L AVL+H G + GHY+ I +N G+W +
Sbjct: 418 KFNDRFEFDEKINLDPFLEKPEDTSATYILHAVLVHSGDN-HGGHYVVYINPKNDGKWCK 476
Query: 64 FDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNG 123
FDD+ V S+ R+E + E+ G ++N +++
Sbjct: 477 FDDDVV----------------SRCTRNEAI------EQNYGGHDNDLNI---------- 504
Query: 124 SNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEM 166
R +SN AYML+Y +S +V+ DV + +I E+
Sbjct: 505 ----RHSSN-AYMLVY-----VRESTIHEVLEDVKSTDISDEL 537
>gi|196005903|ref|XP_002112818.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
gi|190584859|gb|EDV24928.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
Length = 327
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP E+ + ++ + D +YDL AV++H G+ N GHYI+++K G W
Sbjct: 230 KLSYRVVFPLEIKLFNMSNDATNPDQMYDLFAVVVHCGSGPNRGHYISIVKSH--GFWLL 287
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 288 FDDDAVEKI 296
>gi|299472079|emb|CBN79665.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1408
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLI----YDLSAVLIHKGTAVNSGHYIALIKDEN-- 57
K+ F FP E+++ + L E ++ D Y L +VL+H G V+ GHY A I+ +
Sbjct: 579 KVNDRFSFPREMDIDQYLGEEAERDPQRPNRYILHSVLVHSGD-VHGGHYFAYIRPDGRV 637
Query: 58 -TGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVV 89
GQW +F+DE V+ + EGS G V+
Sbjct: 638 KGGQWCKFNDEVVTQVDESEAIEGSYGGGPDVL 670
>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
[Rattus norvegicus]
gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
norvegicus]
gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
norvegicus]
Length = 363
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 269 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 283 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 340
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 341 FDDDIVEKIDAQAIEEFYGLTSDISK 366
>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLANSMED---VDSEYTLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQLDL---IYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP L +YDL+AV++H G+ V SGHY A E
Sbjct: 335 LRNKVDTYVEFPLRGLDMKCYLLEPENSGLESCLYDLAAVVVHHGSGVGSGHYTAYATHE 394
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 395 --GRWFHFNDSTVT 406
>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
Length = 376
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 279 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 336
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 337 FDDDIVEKIDAQAIEEFYGLTSDISK 362
>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
Full=Deubiquitinating enzyme 12-B; AltName:
Full=Ubiquitin thioesterase 12-B; AltName:
Full=Ubiquitin-specific-processing protease 12-B
Length = 370
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP +YDL+AV++H G+ V SGHYIA E
Sbjct: 376 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYATHE 435
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 436 --GRWFHFNDSTVT 447
>gi|242076010|ref|XP_002447941.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
gi|241939124|gb|EES12269.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
Length = 368
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMEL----KLSNTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 323
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 324 LFFDDENV 331
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 343 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 400
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 401 FDDDIVEKI 409
>gi|307102558|gb|EFN50829.1| hypothetical protein CHLNCDRAFT_55534 [Chlorella variabilis]
Length = 922
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 1 MKKKITSPFCFPGELNMQRR--LSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
+ +KI+ P FP L M R S+ + YDL + + H G + SGHY A ++ +
Sbjct: 832 LHQKISKPVAFPPRLKMNRTWLASDSGERGAEYDLVSTVTHHGKTIGSGHYTADVR-QPC 890
Query: 59 GQWWEFDDEHVSNL 72
G W FDD+ V +
Sbjct: 891 GAWLHFDDDRVDKV 904
>gi|259490298|ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
gi|223942511|gb|ACN25339.1| unknown [Zea mays]
gi|414586948|tpg|DAA37519.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 368
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMEL----KLSNTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 323
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 324 LFFDDENV 331
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 502 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 559
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 560 FDDDIVEKI 568
>gi|347838295|emb|CCD52867.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 774
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
+P L M + D +Y+L AV++H GT GHY+A+IK E+ G W FDDE V
Sbjct: 401 YPYHLRMFNTTDDAEDPDRLYELYAVVVHIGTNAFHGHYVAVIKTEDRG-WLLFDDEMV 458
>gi|154309531|ref|XP_001554099.1| hypothetical protein BC1G_07236 [Botryotinia fuckeliana B05.10]
Length = 773
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
+P L M + D +Y+L AV++H GT GHY+A+IK E+ G W FDDE V
Sbjct: 400 YPYHLRMFNTTDDAEDPDRLYELYAVVVHIGTNAFHGHYVAVIKTEDRG-WLLFDDEMV 457
>gi|149027071|gb|EDL82820.1| rCG64153 [Rattus norvegicus]
Length = 377
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 283 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 340
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 341 FDDDIVEKIDAQAIEEFYGLTSDISK 366
>gi|281345515|gb|EFB21099.1| hypothetical protein PANDA_013569 [Ailuropoda melanoleuca]
Length = 327
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 230 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 287
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 288 FDDDIVEKIDAQAIEEFYGLTSDISK 313
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P + Q +S+ + L Y L AVL+H G +SGHY +K N G W++ DD V+
Sbjct: 328 YPESFDFQPYISQSHRQPLFYSLYAVLVHDGVTCHSGHYFCYVKAGN-GHWYKMDDSSVT 386
>gi|260948674|ref|XP_002618634.1| hypothetical protein CLUG_02093 [Clavispora lusitaniae ATCC 42720]
gi|238848506|gb|EEQ37970.1| hypothetical protein CLUG_02093 [Clavispora lusitaniae ATCC 42720]
Length = 476
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 1 MKKKITSPFC--FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
+K K F P + + + PS +Y+L A++ H+G++ +SGHY A +K+E
Sbjct: 376 IKSKFMDDFAGILPKDFSFETATENPSS---VYELQAIITHQGSSADSGHYQAFVKNEKD 432
Query: 59 GQ---WWEFDDEHVSNLGHHPF----GEGSSSSG 85
+ WW+F+D VS++ G G S S
Sbjct: 433 LEGESWWKFNDNKVSSVNRDKIEALAGGGESDSA 466
>gi|444727772|gb|ELW68250.1| Ubiquitin carboxyl-terminal hydrolase 36 [Tupaia chinensis]
Length = 2413
Score = 50.1 bits (118), Expect = 0.004, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K ++GQW++
Sbjct: 652 KITKDVGYPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVK-ASSGQWYQ 710
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 711 MNDSLVHSSNV 721
>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
Full=Deubiquitinating enzyme 12-A; AltName:
Full=Ubiquitin thioesterase 12-A; AltName:
Full=Ubiquitin-specific-processing protease 12-A
gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
Length = 370
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12 [Pongo abelii]
Length = 362
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 265 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 322
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 323 FDDDIVEKIDAQAIEEFYGLTSDISK 348
>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 370
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 267 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 324
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 325 FDDDIVEKIDAQAIEEFYGLTSDISK 350
>gi|148227948|ref|NP_001080289.1| ubiquitin specific peptidase 46 [Xenopus laevis]
gi|27696466|gb|AAH44045.1| Usp46-prov protein [Xenopus laevis]
Length = 249
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 152 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 209
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 210 FDDDIVEKIDAQAIEEFYGLTSDISK 235
>gi|388853460|emb|CCF52859.1| probable ubiquitin-specific processing protease 21 [Ustilago
hordei]
Length = 1118
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 28/144 (19%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI FP ++++ + + S L D Y L VL+H G ++ GHY AL+K E G+
Sbjct: 417 KINDRHEFPLDIDLAHYIDKESPLSKEDWNYKLHGVLVHSGD-LHGGHYFALLKPEKNGK 475
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEY 120
W++FDD+ V+ + E + G ++ P + P
Sbjct: 476 WFKFDDDRVTPVTEKEVLE--DNYGGEITNGHPA--------------GQIGARAPVRA- 518
Query: 121 YNGSNVERFTSNDAYMLMYNLRRD 144
++RFT +AYML+Y RD
Sbjct: 519 -----MKRFT--NAYMLVYVRERD 535
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 335 LRNKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE 394
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 395 --GRWFHFNDSTVT 406
>gi|291393673|ref|XP_002713400.1| PREDICTED: ubiquitin specific protease 4 [Oryctolagus cuniculus]
Length = 859
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 2 KKKITSPFCFP-GELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+ K+ + FP LNM + +PS +YDL AV H G A+ GHY A K++ G+
Sbjct: 730 RDKLDTAVEFPVRALNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGK 788
Query: 61 WWEFDDEHVS 70
W+ FDD +VS
Sbjct: 789 WYYFDDSNVS 798
>gi|226496747|ref|NP_001146737.1| uncharacterized protein LOC100280339 [Zea mays]
gi|219888545|gb|ACL54647.1| unknown [Zea mays]
gi|223974199|gb|ACN31287.1| unknown [Zea mays]
gi|413918515|gb|AFW58447.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 368
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMEL----KLSNSSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 323
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 324 LFFDDENV 331
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
jacchus]
gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
troglodytes]
gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
Length = 370
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 258 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 315
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISK 341
>gi|195624860|gb|ACG34260.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 368
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS S +D Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPMEL----KLSNSSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 323
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 324 LFFDDENV 331
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LS+P+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 263 KLDRKVSYPEFLDLKPYLSQPTAGPLPYALYAVLVHDGATCHSGHYFCCVK-AGHGKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDTKVT 328
>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 316 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 373
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 374 FDDDIVEKI 382
>gi|299753585|ref|XP_001833368.2| ubiquitin carboxyl-terminal hydrolase 5 [Coprinopsis cinerea
okayama7#130]
gi|298410367|gb|EAU88443.2| ubiquitin carboxyl-terminal hydrolase 5 [Coprinopsis cinerea
okayama7#130]
Length = 1100
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E++++ L + +Y L+ VL+H G ++ GHY ALIK + +W
Sbjct: 406 KINDRHEFPFEIDLEEFLDPAADRSQPWVYKLTGVLVHSGD-LHGGHYFALIKPDRNSRW 464
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+FDD+ V+ PV + V E G ++ P+ +
Sbjct: 465 LKFDDDRVT----------------------PVTDKEVLEENYGGEP--LNGIPPTYQRN 500
Query: 122 NGSNVERFTSNDAYMLMY 139
G ++RFT +AYML+Y
Sbjct: 501 QGRTIKRFT--NAYMLVY 516
>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
kowalevskii]
Length = 349
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI ++K G W
Sbjct: 250 KLSYRVVFPLELRLMNTSDDAFNPDKLYDLVAVVIHCGSGPNRGHYITIVKSH--GFWLL 307
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 308 FDDDIVEKI 316
>gi|123475773|ref|XP_001321062.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121903881|gb|EAY08839.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1146
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F FP E+++ + + Y + V+IH GTA GHY+++IK G W++
Sbjct: 227 KINDAFYFPSEVDISK--CSIGVENTKYKIHGVVIHNGTAT-GGHYLSIIK--YNGDWYK 281
Query: 64 FDDEHVSNLGHHPFG--------EGSSSSGSKVVRSEP------VVCQP-VSERVEGANE 108
F+D V+ + F + +S+ VR++ +VC P + E+VE N
Sbjct: 282 FNDNIVTKISQKEFDNLTIGNPKQRTSAYLLFYVRNDVELKDPLLVCPPKLLEQVEKDNT 341
Query: 109 NHVDVHLPSSEYYNGSNVERFTSNDAYMLMYNL 141
+ + L SE + ++ T +D +M + +
Sbjct: 342 YYQKIILAFSEPFISVSLRILTRDDFFMYFFRI 374
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LS+P+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 297 KLDRKVSYPEFLDLKPYLSQPTAGPLPYALYAVLVHDGATCHSGHYFCCVK-AGHGKWYK 355
Query: 64 FDDEHVS 70
DD V+
Sbjct: 356 MDDTKVT 362
>gi|28804572|dbj|BAC57984.1| ubiquitin carboxyl-terminal hydrolase family 2 [Theileria
orientalis]
Length = 629
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 31/140 (22%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVR 90
Y+L AV +H G ++NSGHY A K ++ W+ FDDE V+
Sbjct: 443 YELQAVAVHHG-SINSGHYYAFTK--SSSNWYRFDDETVTKA------------------ 481
Query: 91 SEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTSN---DAYMLMYNLRRDKED 147
SE V E N++ ++ S YN N RF N +AY+LMY L+
Sbjct: 482 SEYAVIDDNFGGEEQECYNYLTTNMNSHGMYNSIN--RFRKNKVYNAYILMYVLK----- 534
Query: 148 SKRKDVVHDVNNMEIESEMI 167
SK+++++ DV+ + +M+
Sbjct: 535 SKKEEILGDVDMAREKYQML 554
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 258 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 315
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISK 341
>gi|430813069|emb|CCJ29546.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1123
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E++++ LS+ + +Y L VL+H G ++ GHY AL+K E G W
Sbjct: 419 KINDHHEFPLEIDLEEFLSDDANKSQPHVYKLYGVLVHSGD-LHGGHYYALLKPEKDGHW 477
Query: 62 WEFDDEHVS 70
++FDD+ V+
Sbjct: 478 YKFDDDRVT 486
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ +P L + LS P + Y L+ VL+H G +VN GHY +L+K N G W+E
Sbjct: 389 KLSKNVAYPESLRLS--LSGP-EGSARYRLAGVLVHAGASVNMGHYYSLVKAAN-GCWYE 444
Query: 64 FDDEHVSNLG 73
DD V +G
Sbjct: 445 MDDAQVRQVG 454
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL +LS+ ++ D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLEL----KLSDTAENSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HW 322
Query: 62 WEFDDEHV 69
FDDE+V
Sbjct: 323 LFFDDENV 330
>gi|213402519|ref|XP_002172032.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212000079|gb|EEB05739.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 441
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L++ +S+ ++ +Y+L VL+H G + SGHY + K ++G W +
Sbjct: 327 KITKHVAYPELLDLGPFMSDANRA-CVYELCGVLVHAGGSTRSGHYYSFCK-SSSGTWLK 384
Query: 64 FDDEHVSN 71
FDD+ VSN
Sbjct: 385 FDDDFVSN 392
>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 366
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEP-SQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KK++ FP EL RLS+ + D+ Y L AV++H G+ N GHY+ L+K+ N W
Sbjct: 269 KKLSYRVVFPLEL----RLSDTDEEADIEYSLFAVVVHVGSGPNHGHYVCLVKNHN--HW 322
Query: 62 WEFDDEHV 69
FDDE V
Sbjct: 323 LCFDDETV 330
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 353 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 410
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 411 FDDDIVEKI 419
>gi|321478620|gb|EFX89577.1| hypothetical protein DAPPUDRAFT_303219 [Daphnia pulex]
Length = 945
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 10 CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
C P +R L E +YDL AV H GT + GHY A ++ G W+ FDD HV
Sbjct: 761 CLPNNPPNRRVLDEH-----VYDLYAVCNHHGTGLVGGHYTAYCRNPTDGMWYLFDDAHV 815
Query: 70 SNL 72
S +
Sbjct: 816 SRV 818
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LS+P+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 296 KLDRKVSYPEFLDLKPYLSQPTAGPLPYALYAVLVHDGATCHSGHYFCCVK-AGHGKWYK 354
Query: 64 FDDEHVS 70
DD V+
Sbjct: 355 MDDTKVT 361
>gi|29165728|gb|AAH49274.1| Ubiquitin specific peptidase 12 [Mus musculus]
Length = 250
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 153 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 210
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 211 FDDDIVEKIDAQAIEEFYGLTSDISK 236
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
M K+T FP +LN++ +S + Y L AVL+H G + NSGHY ++ N
Sbjct: 338 MGGKVTRHISFPEKLNIRPYMSVSQGAAITYQLYAVLVHMGHSTNSGHYYCYVRSSNQA- 396
Query: 61 WWEFDDEHV 69
W+ +D V
Sbjct: 397 WYCMNDSMV 405
>gi|402592721|gb|EJW86648.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
Length = 792
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 215 VRSLLSEAPVPSLEEPFY-WISSDWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSMK- 272
VR +L E ++ P + +IS +WL +++ P + N C H ++ + S+
Sbjct: 544 VRQMLEEND--KIKVPLHRYISREWLHRFSTFSNPGPITNYDFLCQHSQILPRRAASLTD 601
Query: 273 ---RISSKAWNKFFFKYNGGPALTNDDYCMTCLID----GAHTVVCADSYRDRRKSLKGL 325
ISS W+ + K+ GGPA + YC+TC D + ++ LK L
Sbjct: 602 YYATISSSLWDFLYEKFGGGPASSELHYCLTCQNDFQIMKHKREIELTAFLTLEGQLKRL 661
Query: 326 ADDVLSGKLVEGTYY----VSKSWLQQW 349
++V + L G Y ++K+W+ +W
Sbjct: 662 KNNVPA--LTYGYYMPANVIAKAWIDKW 687
>gi|350535651|ref|NP_001232206.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
gi|197127197|gb|ACH43695.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
Length = 344
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 329
Query: 64 FDDEHV 69
FDD+ V
Sbjct: 330 FDDDIV 335
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFP-GELNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP +YDL+AV++H G+ + SGHY A + E
Sbjct: 424 LRNKVDTYVEFPMCGLDMKSYLLEPENSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRHE 483
Query: 57 NTGQWWEFDDEHVS 70
GQW+ F+D V+
Sbjct: 484 --GQWYHFNDSTVT 495
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 317 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 374
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 375 FDDDIVEKI 383
>gi|50549747|ref|XP_502344.1| YALI0D02871p [Yarrowia lipolytica]
gi|49648212|emb|CAG80532.1| YALI0D02871p [Yarrowia lipolytica CLIB122]
Length = 473
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDEN-TGQWWEFDDEHVSNL 72
+Y+L A++ H+G + +SGHY A +++E G+WW+F+D+ V+ +
Sbjct: 404 LYNLQAIVTHQGASADSGHYQAFVRNEKEPGKWWKFNDDKVTEV 447
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|344237274|gb|EGV93377.1| Ubiquitin carboxyl-terminal hydrolase 12 [Cricetulus griseus]
Length = 262
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 165 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 222
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 223 FDDDIVEKI 231
>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
leucogenys]
gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
Length = 355
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 258 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 315
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISK 341
>gi|12840060|dbj|BAB24746.1| unnamed protein product [Mus musculus]
Length = 305
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
YDL +V+ H GTA SGHYIA ++ GQW+EFDD++V+ +
Sbjct: 18 YDLLSVICHHGTA-GSGHYIAYCQNVINGQWYEFDDQYVTEV 58
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 55 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 109
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 110 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 169
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 170 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 222
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 223 VKGKDSEPPGPIDNSRIAQVK 243
>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
Length = 479
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 382 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 439
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 440 FDDDIVEKI 448
>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 387 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 444
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 445 FKFNDSMVSSI 455
>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
Length = 361
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 264 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 321
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 322 FDDDIVEKIDAQAIEEFYGLTSDISK 347
>gi|336377045|gb|EGO05380.1| hypothetical protein SERLA73DRAFT_83040 [Serpula lacrymans var.
lacrymans S7.3]
Length = 933
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 10 CFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL + + + D +Y+L A+++H GT + GHY+++I+ G W FDD+ V
Sbjct: 322 AFPFELRLFNTVDDAQNPDRLYELFAIVVHIGTGPHHGHYVSIIR--TMGFWLIFDDDTV 379
Query: 70 SNLGHH--PFGEGSSSSGSKVV 89
+ P G S+SGS V
Sbjct: 380 DTIKESDIPKYFGDSNSGSAYV 401
>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 387 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 444
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 445 FKFNDSMVSSI 455
>gi|407037720|gb|EKE38765.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 584
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KKI FP +LN+ + +D +YDL A+++H G SGHYI+ K +G W+
Sbjct: 266 KKINGKVAFPLQLNISK-----YGMDGLYDLYAIVVHLGKTKFSGHYISYCKTP-SGGWF 319
Query: 63 EFDDEHV 69
FDD+ V
Sbjct: 320 RFDDDEV 326
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+++ +S+P+ +IY L AVL+H G ++GHY IK N G W++
Sbjct: 173 KIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASN-GLWYQ 231
Query: 64 FDDEHVSN 71
+D VS
Sbjct: 232 MNDSIVST 239
>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
porcellus]
Length = 369
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 329
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISK 355
>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
Length = 471
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 382 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 439
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 440 FKFNDSMVSSI 450
>gi|312083170|ref|XP_003143749.1| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 389
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV++H G+ N GHYI L+K N W
Sbjct: 273 KLSYRVLFPLELRLFNVSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHNF--WLL 330
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 331 FDDDIVDKI 339
>gi|281208463|gb|EFA82639.1| meprin and TRAF domain-containing protein [Polysphondylium pallidum
PN500]
Length = 834
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+ + FP L++ L E + L IY L VL+H G +++GHY A +K G+W
Sbjct: 162 KVNDRYTFPEVLDLTPYLDEEADKSLPSIYHLQGVLVHSGD-LHNGHYYAFMKPSMDGEW 220
Query: 62 WEFDDEHVS 70
+FDDE VS
Sbjct: 221 LKFDDEDVS 229
>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
YJM789]
gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 471
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 382 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 439
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 440 FKFNDSMVSSI 450
>gi|393907557|gb|EFO20320.2| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 406
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV++H G+ N GHYI L+K N W
Sbjct: 290 KLSYRVLFPLELRLFNVSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHNF--WLL 347
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 348 FDDDIVDKI 356
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 378 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 435
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 436 FDDDIVEKI 444
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+M+ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIDKNVQYPECLDMKLYMSQTNSGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
RM11-1a]
gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 382 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 439
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 440 FKFNDSMVSSI 450
>gi|170572009|ref|XP_001891950.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158603235|gb|EDP39240.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 731
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 4 KITSPFCFP-GELNMQRRLS--EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
K+ S FP +L++ ++ E S+ ++YDL A + H G SGHYIA K+E
Sbjct: 382 KVRSKVTFPVHDLDLTPFIANFEKSKEPVLYDLVAFITHYGANAESGHYIAYCKNEVDDN 441
Query: 61 WWEFDDEHVSNL 72
W+EFDD V+ L
Sbjct: 442 WYEFDDNVVTRL 453
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 233 WISSDWLRQWADKIFPSTLDNTSIQCLHGKVPESKIGSM----KRISSKAWNKFFFKYNG 288
+IS +WL +++ P + N C H ++ + S+ ISS W+ + K+ G
Sbjct: 500 YISREWLHRFSTFSNPGPITNYDFLCQHSQILPRRAASLTDYYATISSSLWDFLYEKFGG 559
Query: 289 GPALTNDDYCMTC----LIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYY---- 340
GP+ + YC+TC + + ++ LK L +++ + L G Y
Sbjct: 560 GPSSSELHYCLTCQNEFQVMKRKREIELRAFLTLEGQLKRLKNNIPA--LTYGYYMPPNV 617
Query: 341 VSKSWLQQW 349
++K+W+ +W
Sbjct: 618 IAKAWIDKW 626
>gi|444521451|gb|ELV13184.1| Ubiquitin carboxyl-terminal hydrolase 12 [Tupaia chinensis]
Length = 327
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 230 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 287
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 288 FDDDIVEKIDAQAIEEFYGLTSDISK 313
>gi|432117381|gb|ELK37725.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Myotis davidii]
Length = 422
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 325 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 382
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 383 FDDDIVEKI 391
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 277 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 334
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 335 FDDDIVEKI 343
>gi|398018989|ref|XP_003862659.1| ubiquitin hydrolase, putative [Leishmania donovani]
gi|322500889|emb|CBZ35966.1| ubiquitin hydrolase, putative [Leishmania donovani]
Length = 748
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
Y+L+A++ H G + +GHY+ IKD TG+W F+DE V + PF S
Sbjct: 690 YELTAMISHMGASARTGHYVCHIKDAATGKWLLFNDEKVGESQNPPFSLAS 740
>gi|194896022|ref|XP_001978396.1| GG19564 [Drosophila erecta]
gi|190650045|gb|EDV47323.1| GG19564 [Drosophila erecta]
Length = 1136
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K F F ++N+ R L+E + Y L AVL+H G + GHY+ I + G+W++
Sbjct: 454 KYNDRFEFYEQINLDRYLAESEKTSADYVLHAVLVHSGDN-HGGHYVVFINPKADGRWFK 512
Query: 64 FDDEHVSN 71
FDD+ VS+
Sbjct: 513 FDDDVVSS 520
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
+ +KI + LN+Q +S+ Q Y L V+ H G NSGHY A +K +G+
Sbjct: 223 LGRKIGHHVIYDEHLNLQPYMSK-GQYGFTYSLYGVICHAGGGPNSGHYFAFVKSR-SGR 280
Query: 61 WWEFDDEHVSNLGHHPFGEGSS 82
W+E +DE S + P + ++
Sbjct: 281 WYEMNDEMASPISGPPVSKKTA 302
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 271 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 328
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 329 FDDDIVEKIDAQAIEEFYGLTSDISK 354
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 317 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 374
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 375 FDDDIVEKI 383
>gi|449671759|ref|XP_002166763.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 7 [Hydra magnipapillata]
Length = 633
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDL---IYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP LN+++ L + + IY L AVL+H G + GHY+ I G+
Sbjct: 388 KINDRYAFPESLNLEKFLEPEFRANAPAPIYTLHAVLVHSGDN-HGGHYVVYINPRGDGK 446
Query: 61 WWEFDDEHVS 70
W++FDD+ VS
Sbjct: 447 WFKFDDDVVS 456
>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
Length = 354
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 257 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 314
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISK 340
>gi|351697548|gb|EHB00467.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Heterocephalus
glaber]
Length = 363
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 266 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 323
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 324 FDDDIVEKIDAQAIEEFYGLTSDISK 349
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL AV++H G+ V SGHY A E
Sbjct: 422 LRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLEAVVVHHGSGVGSGHYTAYATHE 481
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 482 --GRWFHFNDSTVT 493
>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
Length = 353
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 256 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 313
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 314 FDDDIVEKIDAQAIEEFYGLTSDISK 339
>gi|432851702|ref|XP_004067042.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 47-like [Oryzias latipes]
Length = 1382
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 20 RLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
R +P L L ++L +V++H G+A GHY A IK + GQW+ F+D+HVS +
Sbjct: 476 RAFKPKSL-LTFELFSVMVHSGSAAG-GHYYACIKSFSDGQWYSFNDQHVSKI 526
>gi|86279664|gb|ABC94487.1| ubiquitin specific protease 12 like 1 [Ictalurus punctatus]
Length = 139
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYI ++K G W
Sbjct: 42 KLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 99
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 100 FDDDIVEKIDAQAIEEFYGLTSDISK 125
>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 359
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 262 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 319
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISK 345
>gi|170087198|ref|XP_001874822.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650022|gb|EDR14263.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1122
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 29/138 (21%)
Query: 4 KITSPFCFPGELNMQRRL--SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E+++ L S +Y L VL+H G ++ GHY ALIK + +W
Sbjct: 427 KINDRHEFPFEIDLDEFLDVSADRSQPWVYKLHGVLVHSGD-LHGGHYFALIKPDRETRW 485
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+FDD+ V+ PV + V E G ++ LP+ +
Sbjct: 486 LKFDDDRVT----------------------PVTDKEVLEENYGGEA--LNGILPAIQRT 521
Query: 122 NGSNVERFTSNDAYMLMY 139
G ++RFT +AYML+Y
Sbjct: 522 QGRTMKRFT--NAYMLVY 537
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 256 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 313
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 314 FDDDIVEKIDAQAIEEFYGLTSDISK 339
>gi|115437452|ref|NP_001043299.1| Os01g0550100 [Oryza sativa Japonica Group]
gi|57899410|dbj|BAD88057.1| putative ubiquitin-specific protease 6 [Oryza sativa Japonica
Group]
gi|57900055|dbj|BAD88117.1| putative ubiquitin-specific protease 6 [Oryza sativa Japonica
Group]
gi|113532830|dbj|BAF05213.1| Os01g0550100 [Oryza sativa Japonica Group]
gi|215694688|dbj|BAG89879.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 474
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
L IYDL AVL HKG + +SGHY+ +K ++ G+W EFDD++ S
Sbjct: 402 HLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDNPS 445
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+M+ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIDKNVQYPECLDMKLYMSQTNSGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>gi|268560346|ref|XP_002646189.1| Hypothetical protein CBG24494 [Caenorhabditis briggsae]
Length = 1264
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 2 KKKITSPFCFPGELNMQ--RRL--SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDEN 57
++K+ +P +P E+ + +R+ S P + YDL AV IH+G GHY LIK
Sbjct: 318 RQKLKTPIAYPREIPARAFQRIDQSNPPPAEF-YDLFAVTIHEGNNAECGHYYDLIKSPY 376
Query: 58 TGQWWEFDDEHVSNLGHHP 76
+ +W+ ++DE V + P
Sbjct: 377 SQKWYRYNDETVEAIAKAP 395
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 257 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 314
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISK 340
>gi|299473323|emb|CBN77722.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1943
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSS 84
+YDL +V+ H G A++SGHY+A +K + TG+W F+D+ V+ + G SSS+
Sbjct: 1845 LYDLYSVVHHLG-ALSSGHYVASVKSQPTGKWHYFNDDQVTEVDEDELGSSSSSA 1898
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 849 LNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 903
>gi|340716657|ref|XP_003396812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47-like isoform 2
[Bombus terrestris]
Length = 1343
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 44/128 (34%)
Query: 16 NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH- 74
N + R S ++ Y+L +++IH G+A + GHY A IKD T +W+ F+D+ V+ + H
Sbjct: 528 NEKNRSSNAAKGPYNYELFSIMIHSGSA-SGGHYYAYIKDFRTNEWFCFNDQSVTQITHD 586
Query: 75 ---HPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTS 131
+G GS+ S Y+ G+ ++S
Sbjct: 587 DIQKTYGGGSTRS-----------------------------------YFTGA----YSS 607
Query: 132 NDAYMLMY 139
+AYMLMY
Sbjct: 608 TNAYMLMY 615
>gi|291227859|ref|XP_002733899.1| PREDICTED: MATH (meprin-associated Traf homology) domain containing
family member (math-33)-like, partial [Saccoglossus
kowalevskii]
Length = 740
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F FP +LN+ L +Y + AVL+H G + GHY+ I ++ G+W +
Sbjct: 114 KINDRFEFPEKLNLDNFLQNKEPTPALYTIHAVLVHSGDN-HGGHYVVYINPKSDGKWCK 172
Query: 64 FDDEHVS 70
FDD+ VS
Sbjct: 173 FDDDVVS 179
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 261 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 318
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 319 FDDDIVEKI 327
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 849 LNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 903
>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Nomascus leucogenys]
Length = 399
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++ D + V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSGHNGHYFSYVKAQE-GQWYKMDGDQVT 355
Query: 71 NLG 73
G
Sbjct: 356 ASG 358
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 849 LNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 903
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 279 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 336
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 337 FDDDIVEKI 345
>gi|33392730|gb|AAH55398.1| Usp12 protein, partial [Mus musculus]
Length = 165
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 68 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 125
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 126 FDDDIVEKI 134
>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 387
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV+IH G+ N GHYI+++K G W
Sbjct: 290 KLSYRVVFPLELRLFNTSDDAYNPDRMYDLVAVVIHCGSGPNRGHYISIVKSH--GLWLL 347
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 348 FDDDIVDKI 356
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K + W
Sbjct: 389 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLL 446
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 447 FDDDIVEKI 455
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K+ +G+W+ FDD +VS
Sbjct: 849 LNMSEFVCDPSARPYMYDLIAVSNHYG-AMGVGHYTAYAKNRFSGKWYYFDDSNVS 903
>gi|146093303|ref|XP_001466763.1| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
gi|134071126|emb|CAM69810.1| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
Length = 748
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
Y+L+A++ H G + +GHY+ IKD TG+W F+DE V + PF S
Sbjct: 690 YELTAMISHMGASARTGHYVCHIKDAATGKWLLFNDEKVGESQNPPFSLAS 740
>gi|170072000|ref|XP_001870068.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868093|gb|EDS31476.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1346
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH----PFGEGSSSS 84
+Y+L A++IH G+A + GHY A IKD + +W+ F+D+ VS + FG GSS +
Sbjct: 541 VYELFAIMIHSGSA-SGGHYYAYIKDFDCSKWFSFNDQTVSTITQEDIQKSFGGGSSKT 598
>gi|350396999|ref|XP_003484735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47-like [Bombus
impatiens]
Length = 1277
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 44/128 (34%)
Query: 16 NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH- 74
N + R S ++ Y+L +++IH G+A + GHY A IKD T +W+ F+D+ V+ + H
Sbjct: 462 NEKNRSSNAAKGPYNYELFSIMIHSGSA-SGGHYYAYIKDFRTNEWFCFNDQSVTQITHD 520
Query: 75 ---HPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTS 131
+G GS+ S Y+ G+ ++S
Sbjct: 521 DIQKTYGGGSTRS-----------------------------------YFTGA----YSS 541
Query: 132 NDAYMLMY 139
+AYMLMY
Sbjct: 542 TNAYMLMY 549
>gi|401415666|ref|XP_003872328.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488552|emb|CBZ23798.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 748
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
Y+L+A++ H G + +GHY+ IKD TG+W F+DE V + PF S
Sbjct: 690 YELTAMISHMGASARTGHYVCHIKDAATGKWLLFNDEKVGESQNPPFSLAS 740
>gi|358338304|dbj|GAA56635.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Clonorchis sinensis]
Length = 828
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + +Y L AV++H G+ N GHY+ L+K G W
Sbjct: 610 KLSCRVVFPTELRLPNTSGGAADQNWLYKLIAVVVHSGSGPNRGHYVTLVKSH--GLWLL 667
Query: 64 FDDEHVSNLGHH 75
FDDE V HH
Sbjct: 668 FDDEVVDK--HH 677
>gi|195469862|ref|XP_002099855.1| GE16726 [Drosophila yakuba]
gi|194187379|gb|EDX00963.1| GE16726 [Drosophila yakuba]
Length = 1137
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K F F ++N+ R L+E + Y L AVL+H G + GHY+ I + G+W++
Sbjct: 455 KYNDRFEFYEQINLDRYLAESEKTSADYVLHAVLVHSGDN-HGGHYVVFINPKADGRWFK 513
Query: 64 FDDEHVSN 71
FDD+ VS+
Sbjct: 514 FDDDVVSS 521
>gi|147810044|emb|CAN67091.1| hypothetical protein VITISV_006756 [Vitis vinifera]
Length = 366
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D Y L AV++H G+ N GHY++L+K N W
Sbjct: 266 KKLSYRVVFPLELKLSNTVEDA---DSEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 320
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 321 FFDDENV 327
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAFATHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|222618651|gb|EEE54783.1| hypothetical protein OsJ_02180 [Oryza sativa Japonica Group]
Length = 443
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 26 QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
L IYDL AVL HKG + +SGHY+ +K ++ G+W EFDD++ S
Sbjct: 371 HLTGIYDLIAVLTHKGRSADSGHYVGWVKQDD-GKWIEFDDDNPS 414
>gi|170063032|ref|XP_001866927.1| ubiquitin carboxyl-terminal hydrolase 64E [Culex quinquefasciatus]
gi|167880813|gb|EDS44196.1| ubiquitin carboxyl-terminal hydrolase 64E [Culex quinquefasciatus]
Length = 1142
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH----PFGEGSSSS 84
+Y+L A++IH G+A + GHY A IKD + +W+ F+D+ VS + FG GSS +
Sbjct: 396 VYELFAIMIHSGSA-SGGHYYAYIKDFDCSKWFSFNDQTVSTITQEDIQKSFGGGSSKT 453
>gi|340716655|ref|XP_003396811.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47-like isoform 1
[Bombus terrestris]
Length = 1277
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 44/128 (34%)
Query: 16 NMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH- 74
N + R S ++ Y+L +++IH G+A + GHY A IKD T +W+ F+D+ V+ + H
Sbjct: 462 NEKNRSSNAAKGPYNYELFSIMIHSGSA-SGGHYYAYIKDFRTNEWFCFNDQSVTQITHD 520
Query: 75 ---HPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVERFTS 131
+G GS+ S Y+ G+ ++S
Sbjct: 521 DIQKTYGGGSTRS-----------------------------------YFTGA----YSS 541
Query: 132 NDAYMLMY 139
+AYMLMY
Sbjct: 542 TNAYMLMY 549
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLSYRVVFPLELKLSNTVEDA---DSEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 802 LNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 856
>gi|402912520|ref|XP_003918809.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 332
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G ++GHY++ +K GQW++ DD ++
Sbjct: 149 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWCCHNGHYLSYVKAPG-GQWYKMDDAEIT 207
>gi|391344661|ref|XP_003746614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like
[Metaseiulus occidentalis]
Length = 918
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 11 FPGELNMQRRL-SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP L++ + S+P + + +YDL AVLIH G+A N GHY A I+ N W+ F+D V
Sbjct: 233 FPEVLDLNGFIESKPPKTEYVYDLFAVLIHSGSA-NGGHYYAYIR--NKTDWFCFNDNQV 289
Query: 70 SNLG----HHPFGEGSSS 83
+ FG G S+
Sbjct: 290 HRVTLEDVQRTFGGGGST 307
>gi|343172718|gb|AEL99062.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D Y L AV++H G+ N GHY++L+K N W
Sbjct: 133 KKLSYRVVFPLELKLSETVEDT---DREYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 187
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 188 FFDDENV 194
>gi|343172716|gb|AEL99061.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + D Y L AV++H G+ N GHY++L+K N W
Sbjct: 133 KKLSYRVVFPLELKLSETVEDT---DREYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 187
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 188 FFDDENV 194
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + Y L AV++H G+ N GHY++L+K N W
Sbjct: 272 KKLSYRVVFPLELKLCNTTDDAPGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 329
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 330 FFDDENV 336
>gi|379030626|ref|NP_001243798.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
[Homo sapiens]
gi|187653908|sp|P0C7H9.1|U17L7_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 7
Length = 530
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P +MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVSNLG 73
DD V+ G
Sbjct: 349 MDDAEVTASG 358
>gi|402591575|gb|EJW85504.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
Length = 430
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL AV++H G+ N GHYI L+K N W
Sbjct: 314 KLSYRVLFPLELRLFNVSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHNF--WLL 371
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 372 FDDDIVDKI 380
>gi|358371658|dbj|GAA88265.1| ubiquitin C-terminal hydrolase [Aspergillus kawachii IFO 4308]
Length = 1122
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 27/146 (18%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS + IY+L VL+H G +N+GHY A +K G W
Sbjct: 425 KINDRHAFPMEFDATPYLSNDADKSEPWIYELHGVLVHSGD-LNAGHYYAFLKPTKDGHW 483
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+ FDD+ V+ E + ++ V QP Y
Sbjct: 484 YRFDDDRVTRATDKEVLEENYGGEYELANGAAGVRQP---------------------YT 522
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKED 147
G + +R S +AYML+Y +R+ + D
Sbjct: 523 RGLSTKR--SMNAYMLVY-IRKSRLD 545
>gi|195334288|ref|XP_002033815.1| GM21521 [Drosophila sechellia]
gi|194125785|gb|EDW47828.1| GM21521 [Drosophila sechellia]
Length = 979
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + C+ + L ++ + + E +L + P+ + FY I+S+WL +
Sbjct: 520 VTEVSSEVVQSCQAYVLFYHKHNPQMKLVRDEAMTLSTSHPLCDSDIQFY-ITSEWLSRL 578
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
A P ++N + C HG + SK + + IS W+ + + GGPA+ C
Sbjct: 579 ATFSEPGPINNQEMLCPHGGILHSKADVISQIAVPISQPLWDYLYRTFGGGPAVNIIFEC 638
Query: 299 MTCLIDGAHTVVCADSYR-DRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDA 357
C A T+ Y + GL ++ S + Y ++ WL+ W +
Sbjct: 639 EICK-RAAETLSRRQQYELNEFTKYNGLQNEFDSTAI----YAIAMPWLRSWQQFSR--G 691
Query: 358 PSEADGGPTTS 368
+ D GP T+
Sbjct: 692 KTHKDPGPITN 702
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDL-IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E +M+ + + + ++ IY+LS+V+ H GT V GHY ++ G+W
Sbjct: 454 KISSDVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICHHGT-VGGGHYTCFARNALNGKW 512
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 513 YEFDDQFVTEV 523
>gi|195126813|ref|XP_002007863.1| GI12139 [Drosophila mojavensis]
gi|193919472|gb|EDW18339.1| GI12139 [Drosophila mojavensis]
Length = 1564
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 18 QRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
Q LS P +YDL A++IH G+A + GHY A IKD +T +W+ F+D++VS +
Sbjct: 697 QELLSGP----YLYDLFAIMIHSGSA-SGGHYYAYIKDFDTDEWFCFNDQNVSTI 746
>gi|114145459|ref|NP_001041464.1| zinc finger protein 3 [Ciona intestinalis]
gi|93003314|tpd|FAA00240.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 993
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 2 KKKITSPFCFPGELNM--------QRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIA 51
++KIT P FP E ++ Q +S PS D +YDLSAV+IH G SGHY A
Sbjct: 862 REKITVPVNFPSEFDIRQHCWSDHQSNVSAPSSSDGNFVYDLSAVVIHHGRGFGSGHYTA 921
Query: 52 LIKDENTGQWW 62
++ G++W
Sbjct: 922 YCWND-IGKFW 931
>gi|9280231|dbj|BAB01721.1| ubiquitin specific protease; queuine tRNA-ribosyltransferase
[Arabidopsis thaliana]
Length = 520
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL +VL HKG + +SGHY+A +K E +G+W ++DD + S
Sbjct: 450 IYDLVSVLTHKGRSADSGHYVAWVKQE-SGKWVQYDDANTS 489
>gi|384254258|gb|EIE27732.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 383
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+K+ FP EL ++ + + +D Y L AV++H G+ N GHY++ +K + W
Sbjct: 280 RKLVYRVVFPFELKLRNTSEDCAHVDDAYQLFAVVVHVGSGPNHGHYVSFVK--SAEHWL 337
Query: 63 EFDDEHVSNLG----HHPFGEGSSSSGS 86
FDD+ V + H FG S +
Sbjct: 338 FFDDDMVEPMSEQQVHLAFGSTQEYSNT 365
>gi|75243436|sp|Q84WC6.1|UBP7_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 7; AltName:
Full=Deubiquitinating enzyme 7; Short=AtUBP7; AltName:
Full=Ubiquitin thioesterase 7; AltName:
Full=Ubiquitin-specific-processing protease 7
gi|28393202|gb|AAO42031.1| putative ubiquitin-specific protease 7 (UBP7) [Arabidopsis
thaliana]
Length = 477
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL +VL HKG + +SGHY+A +K E +G+W ++DD + S
Sbjct: 407 IYDLVSVLTHKGRSADSGHYVAWVKQE-SGKWVQYDDANTS 446
>gi|42565077|ref|NP_566680.2| ubiquitin-specific protease 7 [Arabidopsis thaliana]
gi|332642966|gb|AEE76487.1| ubiquitin-specific protease 7 [Arabidopsis thaliana]
Length = 532
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL +VL HKG + +SGHY+A +K E +G+W ++DD + S
Sbjct: 462 IYDLVSVLTHKGRSADSGHYVAWVKQE-SGKWVQYDDANTS 501
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI F LN++ +S S D+ Y L VL+H G + +SGHY ++ N W+
Sbjct: 311 KIKKKVRFDSALNLKPFVSGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSN-NMWYT 369
Query: 64 FDDEHVSNLG 73
DD VS++G
Sbjct: 370 LDDTRVSHVG 379
>gi|402077866|gb|EJT73215.1| ubiquitin carboxyl-terminal hydrolase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 2616
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
Query: 2 KKKITSPFCFPGELNMQ----RRLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKD 55
+ KI F FP ++M+ LS+PSQ + I++L VL+H GTA SGHY + I++
Sbjct: 1867 RNKINDYFMFPTRIDMRPYTIEHLSDPSQESVPDIFELVGVLVHSGTA-ESGHYYSYIRE 1925
Query: 56 ENTG----QWWEFDDEHVSN 71
T W EF+D+ VS
Sbjct: 1926 RPTSGSGETWVEFNDDLVSQ 1945
>gi|303315325|ref|XP_003067670.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107340|gb|EER25525.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1527
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 11 FPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL+M R P+ ++YDL AV H GT + GHY A K G W+E++D H
Sbjct: 1233 FPLELDMSGRAQAPNDGKSMMYDLIAVDNHYGT-LGGGHYTAYAKSFADGNWYEYNDSHT 1291
Query: 70 S 70
S
Sbjct: 1292 S 1292
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPLELKLCNTTDDAPGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 327
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 328 FFDDENV 334
>gi|448524262|ref|XP_003868958.1| Ubp8 protein [Candida orthopsilosis Co 90-125]
gi|380353298|emb|CCG26054.1| Ubp8 protein [Candida orthopsilosis]
Length = 543
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 4 KITSPFCFPGELNMQ-RRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
K+ +P P LN+ +++ S D++Y+L +V+ H G +VN+GHY+ K+ +GQW
Sbjct: 456 KVETPVKVPLYLNIAPYSVNQGSAKDIVYELFSVICHIG-SVNTGHYVVFTKNA-SGQWL 513
Query: 63 EFDDEHVS 70
+FDD VS
Sbjct: 514 KFDDSVVS 521
>gi|320035500|gb|EFW17441.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str. Silveira]
Length = 1527
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 11 FPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL+M R P+ ++YDL AV H GT + GHY A K G W+E++D H
Sbjct: 1233 FPLELDMSGRAQAPNDGKSMMYDLIAVDNHYGT-LGGGHYTAYAKSFADGNWYEYNDSHT 1291
Query: 70 S 70
S
Sbjct: 1292 S 1292
>gi|154341234|ref|XP_001566570.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063893|emb|CAM40083.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 751
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPF 77
Y+L+A++ H G + +GHY+ IKD TG+W F+DE V + PF
Sbjct: 693 YELTAMISHMGASARTGHYVCHIKDAATGKWLLFNDEKVGESQNPPF 739
>gi|121718827|ref|XP_001276207.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Aspergillus
clavatus NRRL 1]
gi|119404405|gb|EAW14781.1| ubiquitin C-terminal hydrolase (HAUSP), putative [Aspergillus
clavatus NRRL 1]
Length = 1123
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 44/190 (23%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI FP E + LS + +Y+L VL+H G +N+GHY A +K G W
Sbjct: 425 KINDRHAFPMEFDASPYLSNDADKSESYMYELHGVLVHSGD-LNAGHYYAFLKPTKDGHW 483
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
+ FDD+ V+ E + ++ V QP Y
Sbjct: 484 YRFDDDRVTRATDKEVLEENYGGEYELANGAAGVRQP---------------------YT 522
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
G + +R S +AYML+Y +R+ + D DV+ + DD+ PSH+ K
Sbjct: 523 RGLSTKR--SMNAYMLVY-VRKTRID----DVLLPIT-----------KDDV--PSHIEK 562
Query: 182 DIKELNRSYL 191
+ E +L
Sbjct: 563 RLTEERAEFL 572
>gi|242210465|ref|XP_002471075.1| predicted protein [Postia placenta Mad-698-R]
gi|220729865|gb|EED83732.1| predicted protein [Postia placenta Mad-698-R]
Length = 269
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP +L + + + D +Y+L A+++H G + GHY+ +IK G W
Sbjct: 178 KLAYRVAFPFQLRLFNTVDDAENPDRLYELFAIVVHIGNGPHHGHYVTIIKAR--GTWLL 235
Query: 64 FDDEHVSNLGHH--PFGEGSSSSGSKVV 89
FDD+ V + P G S++GS V
Sbjct: 236 FDDDSVDTIKESDIPKYYGESTNGSAYV 263
>gi|119190871|ref|XP_001246042.1| hypothetical protein CIMG_05483 [Coccidioides immitis RS]
Length = 1671
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 11 FPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL+M R P+ ++YDL AV H GT + GHY A K G W+E++D H
Sbjct: 1377 FPLELDMTGRAQAPNDGKSMMYDLIAVDNHYGT-LGGGHYTAYAKSFADGNWYEYNDSHT 1435
Query: 70 S 70
S
Sbjct: 1436 S 1436
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+++ +S+P+ +IY L AVL+H G ++GHY IK N G W++
Sbjct: 326 KIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASN-GLWYQ 384
Query: 64 FDDEHVS 70
+D VS
Sbjct: 385 MNDSIVS 391
>gi|54306630|gb|AAV33469.1| ubiquitin-specific protease 26, partial [Fragaria x ananassa]
Length = 41
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 603 VVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVR 640
V+ T PEICE+CIGE+ES ELM+KL YC++DI +R
Sbjct: 3 VIWTCPEICEECIGEKESRELMRKLEYCNEDIYFISIR 40
>gi|11993467|gb|AAG42752.1|AF302661_1 ubiquitin-specific protease 7 [Arabidopsis thaliana]
Length = 477
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL +VL HKG + +SGHY+A +K E +G+W ++DD + S
Sbjct: 407 IYDLVSVLTHKGRSADSGHYVAWVKQE-SGKWVQYDDANTS 446
>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + + Y L AV++H G+ N GHY++L+K N W
Sbjct: 270 KKLSYRVVFPLELKLCNTTDDAPGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 327
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 328 FFDDENV 334
>gi|308800772|ref|XP_003075167.1| putative ubiquitin-specific protease UBP12 (ISS) [Ostreococcus
tauri]
gi|116061721|emb|CAL52439.1| putative ubiquitin-specific protease UBP12 (ISS) [Ostreococcus
tauri]
Length = 1170
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 4 KITSPFCFPGELNMQ---RRLSEPSQLDLI---YDLSAVLIHKGTAVNSGHYIALIK--- 54
KI + FP EL++ R+ P + Y L +VL+H G +N GHY A I+
Sbjct: 431 KIHDRYEFPEELDLDVGDRKYLVPDSDKSVRNKYKLHSVLVHSG-GINGGHYYAFIRPDL 489
Query: 55 DENTGQWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVH 114
+ QW++FDDEHV+ SG V PV +E A+++ +V
Sbjct: 490 QDEDAQWYKFDDEHVTKESTEKAVMDQYGSGGSV---------PVDSDME-ADDDSTNVR 539
Query: 115 LPSSEYYNGSNVERFTSNDAYMLMY 139
+ N+ + AYML+Y
Sbjct: 540 V-------APNLRYAKMSSAYMLVY 557
>gi|967276|gb|AAA74956.1| tRNA-guanine transglycosylase [Caenorhabditis elegans]
Length = 489
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
YDL ++ HKG + GHY+A ++ G+W FDDEHV+
Sbjct: 391 FYDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT 431
>gi|392868885|gb|EAS30236.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 1527
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 11 FPGELNMQRRLSEPSQ-LDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
FP EL+M R P+ ++YDL AV H GT + GHY A K G W+E++D H
Sbjct: 1233 FPLELDMTGRAQAPNDGKSMMYDLIAVDNHYGT-LGGGHYTAYAKSFADGNWYEYNDSHT 1291
Query: 70 S 70
S
Sbjct: 1292 S 1292
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 775 LNMSEFVCNPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 829
>gi|346979615|gb|EGY23067.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 771
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+K+ +P L M + D +Y+L AV++H G GHY+++IK ++ G W
Sbjct: 408 QKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYVSVIKTQDRG-WL 466
Query: 63 EFDDEHVSNLGHH----PFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDV----- 113
FDDE V + H FG+ ++ + V+ + + V +E V +
Sbjct: 467 LFDDEMVEPVDKHFVRNFFGDKPGTACAYVLFYQETTFEKVQAEMEAEGLEEVKIANETA 526
Query: 114 HLPSSEYYNGSNVERFTSNDAYMLMYNLRRDKEDS 148
+L S NV T L +L RD +S
Sbjct: 527 NLASENGQGNGNVIPLTKQSTQPLSPSLERDTSNS 561
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P L+++ +S+ Y L AVL+H G + ++GHY IK N GQW++
Sbjct: 328 KITKDVKYPESLDLRPFMSQSQGEPQNYGLYAVLVHSGFSCHAGHYFCYIKASN-GQWYQ 386
Query: 64 FDDEHVS 70
+D VS
Sbjct: 387 MNDSSVS 393
>gi|431919643|gb|ELK18031.1| Ubiquitin carboxyl-terminal hydrolase 47 [Pteropus alecto]
Length = 1355
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 20 RLSEPS--QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
+LS+P + LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 454 KLSKPGLEKNSLIYELFSVMVHSGSAA-GGHYYACIKSFSDEQWYSFNDQHVSRI 507
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 4 KITSPFCFPGELNMQRRL-SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KI P F EL + R L S PSQ Y+L A + H G GHY A K + GQW
Sbjct: 466 KIYKPLGFTSELVLSRDLLSSPSQEGRKYELVATITHHGRDPYRGHYTAHAKHAD-GQWL 524
Query: 63 EFDDEHVSNLGHH 75
FDD+ V +G +
Sbjct: 525 RFDDDAVVPVGEN 537
>gi|19113320|ref|NP_596528.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe
972h-]
gi|24638294|sp|O94269.1|UBP3_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 3;
AltName: Full=Deubiquitinating enzyme 3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|3810845|emb|CAA21806.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe]
Length = 512
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLI---YDLSAVLIHKGTAVNSGHYIALIKDENTG 59
+K P +P L++ + + PS I YDL+AV+ H GT+ + GHY ++ +
Sbjct: 405 QKNYKPIAYPARLSIPQNVFSPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKS 464
Query: 60 QWWEFDDEHVSNLGHH 75
W+ DD H+ + H
Sbjct: 465 GWFRIDDTHIHRVPIH 480
>gi|296419248|ref|XP_002839229.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635239|emb|CAZ83420.1| unnamed protein product [Tuber melanosporum]
Length = 578
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
++YDL AV++H+GT N GHY+A K + +WW DD+ ++ +
Sbjct: 469 ILYDLYAVVVHQGTGANFGHYVAYTKHQE--EWWLLDDDRITKV 510
>gi|440295045|gb|ELP87974.1| hypothetical protein EIN_418530 [Entamoeba invadens IP1]
Length = 600
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
+KI FP ELNM + D ++DL V++H G + GHYI IK N+G W+
Sbjct: 273 RKINGFVKFPSELNMSKYGK-----DGLFDLYGVIVHLGRTKHGGHYICYIKGPNSG-WF 326
Query: 63 EFDDEHVSNLGHHPFGEGSSSSGSKVV--RSEPVVCQPVSERVE 104
+ DD+ V+++ P S G + RS V + + +VE
Sbjct: 327 QCDDDTVTSV---PIKTVLKSEGYMLFYKRSNETVLKSDTNKVE 367
>gi|428186498|gb|EKX55348.1| hypothetical protein GUITHDRAFT_99131 [Guillardia theta CCMP2712]
Length = 809
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 33/145 (22%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLD---LIYDLSAVLIHKGTAVNSGHYIALIKDEN-TG 59
KI F FP EL+M + + + IY L +V++H G+A N GHY+A + G
Sbjct: 340 KINDRFEFPAELDMSQFTVKEEGTESSCAIYSLCSVIVHMGSA-NMGHYVAYCRPAGEQG 398
Query: 60 QWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSE 119
+W+ FDD+HV+ + E +E N LP+
Sbjct: 399 KWFCFDDDHVTEVAE-------------------------DEAIENNFGNDNSPSLPAGG 433
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRD 144
Y S +++ S AYML Y +R D
Sbjct: 434 IYMRSVLQKMRS--AYMLCY-IRTD 455
>gi|156393850|ref|XP_001636540.1| predicted protein [Nematostella vectensis]
gi|156223644|gb|EDO44477.1| predicted protein [Nematostella vectensis]
Length = 386
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL +V+IH G+ N GHYI ++K G W
Sbjct: 289 KLSYRVVFPFELRLFNTSDDAVNNDQLYDLVSVVIHCGSGPNRGHYITIVKSH--GFWLL 346
Query: 64 FDDEHVSNLGHH 75
FDD+ V + H
Sbjct: 347 FDDDIVEKIEPH 358
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D +YDL AV++H G+ N GHYIA++K W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHEF--WLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>gi|194768070|ref|XP_001966137.1| GF19514 [Drosophila ananassae]
gi|190623022|gb|EDV38546.1| GF19514 [Drosophila ananassae]
Length = 1144
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K F F ++N+ R L+E + Y L AVL+H G + GHY+ I + G+W++
Sbjct: 462 KYNDRFEFYEQINLDRYLAEGEKTSADYVLHAVLVHSGDN-HGGHYVVFINPKADGRWFK 520
Query: 64 FDDEHVSN 71
FDD+ VS+
Sbjct: 521 FDDDVVSS 528
>gi|432103208|gb|ELK30448.1| Ubiquitin carboxyl-terminal hydrolase 47 [Myotis davidii]
Length = 1274
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 385 LIYELFSVMVHSGSAAG-GHYYACIKSFSDDQWYSFNDQHVSRI 427
>gi|351697007|gb|EHA99925.1| Ubiquitin carboxyl-terminal hydrolase 20 [Heterocephalus glaber]
Length = 856
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
K++S FP E L+++ L++ SQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 625 KVSSHVSFPLEGLDLRPFLAKECASQI-TTYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 682
Query: 61 WWEFDDE 67
W+EFDD+
Sbjct: 683 WYEFDDQ 689
>gi|417406372|gb|JAA49847.1| Putative ubiquitin carboxyl-terminal hydrolase 47 [Desmodus
rotundus]
Length = 1355
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 465 LIYELFSVMVHSGSAAG-GHYYACIKSFSDDQWYSFNDQHVSRI 507
>gi|145484667|ref|XP_001428343.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395428|emb|CAK60945.1| unnamed protein product [Paramecium tetraurelia]
Length = 2223
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Query: 2 KKKITSPFCFPGELNMQR------------------RLSEPSQLDLIYD--LSAVLIHKG 41
K K+ + FP +LNM++ RL D YD L V+IH G
Sbjct: 1527 KFKLNDYYEFPTQLNMKQFTKEYLQKQDFQDVEDADRLIVTEYSDEYYDYHLRGVIIHVG 1586
Query: 42 TAVNSGHYIALIKDENTGQWWEFDDEHVS-----NLGHHPFGEGSSSSGSKVVRSEPVVC 96
TA + GHY +LIKD T +W+EF+D V +L FG ++++
Sbjct: 1587 TA-DHGHYYSLIKDAQTNKWYEFNDILVKPFEFGDLATEAFGNDDKGRSNQLLSRSKNAY 1645
Query: 97 QPVSERVEGANEN 109
ER +EN
Sbjct: 1646 MLFYERKTYFDEN 1658
>gi|14041989|dbj|BAB55063.1| unnamed protein product [Homo sapiens]
Length = 1287
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V+ H G+A GHY A IK + QW+ FDD+HVS +
Sbjct: 397 LIYELFSVMAHSGSAAG-GHYYACIKSFSDEQWYSFDDQHVSRI 439
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L++Q +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDIQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 807 LNMSEFVCNPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 861
>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 471
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 11 FPGELNMQR--------RLSEPSQL-DLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
FP LNM+ + SE ++ D+IY+L ++ HKGT VN GHYIA K GQW
Sbjct: 382 FPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISG-GQW 439
Query: 62 WEFDDEHVSNL 72
++F+D VS++
Sbjct: 440 FKFNDSIVSSI 450
>gi|389594133|ref|XP_003722313.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
gi|321438811|emb|CBZ12571.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
Length = 748
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGS 81
Y+L+A++ H G + +GHY+ IKD TG+W F+DE V + PF S
Sbjct: 690 YELTAMISHMGASARTGHYVCHIKDGATGKWLLFNDEKVGESQNPPFSLAS 740
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ F LN+ LSE ++ + Y L A + H G+ NSGHY+A +K G+W
Sbjct: 427 KISRQISFDESLNIAPYLSE-NRGPVRYKLYAAVHHYGSGPNSGHYVASVKAP-CGKWTR 484
Query: 64 FDDEHVSNLG 73
DD HVS +G
Sbjct: 485 MDDSHVSEIG 494
>gi|328711432|ref|XP_003244535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Acyrthosiphon pisum]
Length = 571
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
++DL AV++H G V SGHY + D GQW+E++DE V
Sbjct: 504 MFDLVAVVVHDGEGVGSGHYTSYAVDSTEGQWYEYNDEKV 543
>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
Length = 369
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK+ FP EL + + + D Y L AV++H G+ N GHY++L+K N W
Sbjct: 269 KKLLYRVVFPLELKLSNTMEDA---DSEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 323
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 324 FFDDENV 330
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 392 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 451
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 452 --GRWFHFNDSTVT 463
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI P + L++Q +S Q Y L AV+ H G NSGHY A +K N GQW+E
Sbjct: 912 KIGQPVKYDERLSLQSVMSS-GQHGPSYVLYAVISHAGGGPNSGHYYAHVKGSN-GQWYE 969
Query: 64 FDDEHVSNLGHHPFG 78
+D+ V+ P G
Sbjct: 970 MNDDSVTRHPGAPTG 984
>gi|390352849|ref|XP_782863.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 47-like, partial [Strongylocentrotus
purpuratus]
Length = 1630
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 31 YDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGH 74
Y+L ++++H GTA + GHY A IK GQW+ F+D+HVS + +
Sbjct: 225 YELFSIMVHSGTA-SGGHYYAYIKSFTDGQWYCFNDQHVSRITY 267
>gi|385303854|gb|EIF47904.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis
AWRI1499]
Length = 375
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 2/40 (5%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
+Y+L AV+ H G VN+GHYI+L+KD + G W++FDD HV
Sbjct: 314 LYELYAVVYHIGN-VNTGHYISLVKDRD-GMWFKFDDSHV 351
>gi|17531751|ref|NP_497006.1| Protein USP-14 [Caenorhabditis elegans]
gi|20178345|sp|Q17361.2|UBP14_CAEEL RecName: Full=Ubiquitin carboxyl-terminal hydrolase 14; AltName:
Full=Deubiquitinating enzyme 14; AltName: Full=Ubiquitin
thioesterase 14; AltName:
Full=Ubiquitin-specific-processing protease 14
gi|3874273|emb|CAB03876.1| Protein USP-14 [Caenorhabditis elegans]
Length = 489
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
YDL ++ HKG + GHY+A ++ G+W FDDEHV+
Sbjct: 391 FYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVT 431
>gi|330797555|ref|XP_003286825.1| hypothetical protein DICPUDRAFT_77679 [Dictyostelium purpureum]
gi|325083198|gb|EGC36657.1| hypothetical protein DICPUDRAFT_77679 [Dictyostelium purpureum]
Length = 486
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ FP E +Q S+ D Y+L AV+IH G+ N GHY +LIK G W+
Sbjct: 389 KLNYRVVFPFETIIQNTTSDLKDYDRKYNLFAVVIHVGSGPNRGHYYSLIKCH--GVWFL 446
Query: 64 FDDEHV 69
FDD+++
Sbjct: 447 FDDDNI 452
>gi|167526299|ref|XP_001747483.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773929|gb|EDQ87563.1| predicted protein [Monosiga brevicollis MX1]
Length = 1627
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLG-HHPFGEGSSSSGSK 87
++Y+L +++IH G+A+ GHY A IKD TG+W F+D V+ + G S + S
Sbjct: 570 MLYELFSIMIHSGSALG-GHYYAYIKDFKTGKWLCFNDSSVTEIDVSFVLSPGPSMTMSS 628
Query: 88 VVRSEPVVCQP--VSERVEGA 106
+ + +C+P ER+ GA
Sbjct: 629 LEKRSLTLCEPPLQFERLRGA 649
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A +
Sbjct: 367 LRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK 426
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 427 --GRWFHFNDSTVT 438
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A +
Sbjct: 422 LRNKVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK 481
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 482 --GRWFHFNDSTVT 493
>gi|310793005|gb|EFQ28466.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola M1.001]
Length = 2569
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 18/102 (17%)
Query: 1 MKKKITSPFCFPGELNMQ----RRLSEPSQL--DLIYDLSAVLIHKGTAVNSGHYIALIK 54
M+ KI F FP +++M+ L PS+ + I++L VL+H GTA SGHY + I+
Sbjct: 1840 MRSKINDHFSFPTKIDMRPYTIDHLGSPSESGEEDIFELVGVLVHAGTA-ESGHYYSYIR 1898
Query: 55 DENTG----QWWEFDDEHVS-----NLGHHPFG--EGSSSSG 85
+ T W+EF+D+ VS + FG +GS+ +G
Sbjct: 1899 ERPTAASSETWFEFNDDVVSPWDPAKMEESTFGGTDGSAETG 1940
>gi|195043988|ref|XP_001991731.1| GH11908 [Drosophila grimshawi]
gi|193901489|gb|EDW00356.1| GH11908 [Drosophila grimshawi]
Length = 1147
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K F F ++N+ R L+E + Y L AVL+H G + GHY+ I + G+W++
Sbjct: 465 KYNDRFEFYEQINLDRYLAEREKTPADYVLHAVLVHSGDN-HGGHYVVFINPKADGRWYK 523
Query: 64 FDDEHVS 70
FDD+ VS
Sbjct: 524 FDDDVVS 530
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGT--AVNSGHYIALIKDENTGQW 61
K+T+ FP L+M +S L +Y+L AV++H A ++GHY L+K+ N G W
Sbjct: 246 KLTNYVAFPEVLDMGPYMSGNRGLTPVYNLYAVVVHASVSNAAHNGHYFCLVKNPN-GYW 304
Query: 62 WEFDDEHVSNLG 73
+ DD V+ +G
Sbjct: 305 YRADDAKVTEVG 316
>gi|345569877|gb|EGX52703.1| hypothetical protein AOL_s00007g486 [Arthrobotrys oligospora ATCC
24927]
Length = 1134
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYD--LSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K+ + FP E + LS + YD L VL+H G N+GHY A IK E G+W
Sbjct: 428 KVNDLYEFPEEFDASPYLSPDADKSEPYDYVLHGVLVHSGD-FNAGHYYAFIKPEAGGRW 486
Query: 62 WEFDDEHVS 70
++FDD+ V+
Sbjct: 487 FKFDDDRVT 495
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 821 LNMSEFVCNPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 875
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 849 LNMSEFVCNPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 903
>gi|365990469|ref|XP_003672064.1| hypothetical protein NDAI_0I02530 [Naumovozyma dairenensis CBS 421]
gi|343770838|emb|CCD26821.1| hypothetical protein NDAI_0I02530 [Naumovozyma dairenensis CBS 421]
Length = 1197
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 29/148 (19%)
Query: 4 KITSPFCFPGELN----MQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTG 59
KI + FP + M+++ + IY+L VL+H G +++GHY A+IK +
Sbjct: 407 KINDRYEFPESFDTSPYMEKKEDGSNNEPCIYNLHGVLVHTGD-ISTGHYYAMIKPDLED 465
Query: 60 QWWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSE 119
QW+ FDDE V KV + Q E + D+ + E
Sbjct: 466 QWYRFDDEKV----------------WKVTKK-----QVFEENFGLDRRSEDDLKCMTRE 504
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKED 147
Y + R TS AYML+Y +R+DKE+
Sbjct: 505 QYEDYLITRHTS--AYMLVY-IRKDKEE 529
>gi|444516597|gb|ELV11214.1| Ubiquitin carboxyl-terminal hydrolase 47 [Tupaia chinensis]
Length = 947
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 194 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 236
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + +PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 786 LNMSEFVCDPSARPYVYDLIAVSNHYG-AMGVGHYTAHAKNKLNGKWYYFDDSNVS 840
>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
Length = 415
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + + D IYDL A ++H G N GHYI L+K + W
Sbjct: 288 KLSYRVVFPLELRLFNVSDDAEEADQIYDLVATVVHCGATPNRGHYITLVKSNSF--WLV 345
Query: 64 FDDEHVSNL 72
FDD+ V L
Sbjct: 346 FDDDIVEKL 354
>gi|397641094|gb|EJK74470.1| hypothetical protein THAOC_03852, partial [Thalassiosira oceanica]
Length = 1125
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 17 MQRRLSEPS-QLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHH 75
+ R L PS D+ Y L AV H GT + GHY+A + D TG WWE +DE V+ +
Sbjct: 487 LPRTLRLPSLGSDVTYLLCAVQNHLGTTPHGGHYVAEVMDWTTGVWWECNDESVTRMPDG 546
Query: 76 P 76
P
Sbjct: 547 P 547
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQLD-----LIYDLSAVLIHKGTAVNSGHYIALIK 54
++ KI + FP + L++Q + P D +YDL+AV++H+G+ +GHYIA
Sbjct: 391 LRTKIDTYVQFPMKGLDIQPFMLGPECQDENVSTTVYDLAAVIVHQGSGAGAGHYIAFA- 449
Query: 55 DENTGQWWEFDDEHVS 70
N GQW+ F+D V+
Sbjct: 450 -VNNGQWYCFNDSTVT 464
>gi|391328793|ref|XP_003738868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Metaseiulus occidentalis]
Length = 334
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + D +YDL A+++H GT N GHYI+++K G W
Sbjct: 237 KLSWRVVFPLELRLFNTSDDAVNGDRLYDLVAIVVHCGTGPNRGHYISIVKSH--GVWLL 294
Query: 64 FDDEHVSNL 72
FDD+ V +
Sbjct: 295 FDDDIVDKI 303
>gi|195377244|ref|XP_002047402.1| GJ13418 [Drosophila virilis]
gi|194154560|gb|EDW69744.1| GJ13418 [Drosophila virilis]
Length = 1563
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 16 NMQRRL-SEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
NM+ RL E IYDL A++IH G+A + GHY A IKD + +W+ F+D++VS +
Sbjct: 687 NMEARLKQELLSGPYIYDLFAIMIHSGSA-SGGHYYAYIKDFDNDEWFCFNDQNVSTI 743
>gi|164605535|dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
Length = 1118
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 4 KITSPFCFPGELNMQR----RLSEPSQLDL--IYDLSAVLIHKGTAVNSGHYIALIKDEN 57
KI + FP EL++ R LS + ++ +Y L +VL+H G V+ GHY A I+
Sbjct: 406 KINDRYEFPLELDLDRDDGKYLSPDADRNVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTL 464
Query: 58 TGQWWEFDDEHVS 70
+ QW++FDDE V+
Sbjct: 465 SDQWYKFDDERVT 477
>gi|119588948|gb|EAW68542.1| ubiquitin specific peptidase 47, isoform CRA_a [Homo sapiens]
Length = 1181
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 291 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 333
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L++Q +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDIQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|315040860|ref|XP_003169807.1| ubiquitin carboxyl-terminal hydrolase 2 [Arthroderma gypseum CBS
118893]
gi|311345769|gb|EFR04972.1| ubiquitin carboxyl-terminal hydrolase 2 [Arthroderma gypseum CBS
118893]
Length = 1077
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
IY+ AV+ H G+ +N GHYI+L++DE W +FDD+ V++
Sbjct: 1007 IYNAYAVVRHLGSTMNEGHYISLVRDEQRKCWRKFDDQRVTDF 1049
>gi|296217571|ref|XP_002755100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Callithrix
jacchus]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ F +LN+ LS + + Y L AV+ H G+ NSGHY+A ++ G+W
Sbjct: 425 KISRQVAFDEKLNIAPYLSV-NHGPVRYKLYAVVHHYGSGPNSGHYVASVRSP-FGKWTR 482
Query: 64 FDDEHVSNLGHH-PFGEGSS 82
DD HVS +G P G+ S+
Sbjct: 483 MDDSHVSEMGSSGPLGDQSA 502
>gi|109107296|ref|XP_001098399.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 isoform 1
[Macaca mulatta]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|47226065|emb|CAG04439.1| unnamed protein product [Tetraodon nigroviridis]
Length = 269
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHV 69
+P L++ +SE + L+Y L AVL+H G + +SGHY IK + GQW+ +D V
Sbjct: 192 YPEYLDLYPFMSETQEKPLVYRLYAVLVHYGRSSHSGHYFCYIKASD-GQWYRMNDNSV 249
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L++Q +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDIQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|402894202|ref|XP_003910259.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Papio anubis]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|397494710|ref|XP_003818216.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Pan paniscus]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+++ +S+P+ +IY L AVL+H G ++GHY IK N G W++
Sbjct: 151 KIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASN-GLWYQ 209
Query: 64 FDDEHVS 70
+D VS
Sbjct: 210 MNDSIVS 216
>gi|71774197|ref|NP_060414.3| ubiquitin carboxyl-terminal hydrolase 47 [Homo sapiens]
gi|151555069|gb|AAI48588.1| Ubiquitin specific peptidase 47 [synthetic construct]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L++Q +S+ + L+Y L AVL+H G + ++GHY++ +K GQW++ DD V+
Sbjct: 297 YPECLDVQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVKAPG-GQWYKMDDAEVT 355
>gi|380783163|gb|AFE63457.1| ubiquitin carboxyl-terminal hydrolase 47 [Macaca mulatta]
gi|383409281|gb|AFH27854.1| ubiquitin carboxyl-terminal hydrolase 47 [Macaca mulatta]
gi|383419547|gb|AFH32987.1| ubiquitin carboxyl-terminal hydrolase 47 [Macaca mulatta]
gi|384943056|gb|AFI35133.1| ubiquitin carboxyl-terminal hydrolase 47 [Macaca mulatta]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|338727369|ref|XP_001501242.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Equus
caballus]
Length = 1435
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 544 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 586
>gi|332211789|ref|XP_003254999.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 isoform 2
[Nomascus leucogenys]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|119588950|gb|EAW68544.1| ubiquitin specific peptidase 47, isoform CRA_c [Homo sapiens]
Length = 1177
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 287 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 329
>gi|114636196|ref|XP_001171056.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 isoform 4 [Pan
troglodytes]
gi|410223756|gb|JAA09097.1| ubiquitin specific peptidase 47 [Pan troglodytes]
gi|410267204|gb|JAA21568.1| ubiquitin specific peptidase 47 [Pan troglodytes]
gi|410300080|gb|JAA28640.1| ubiquitin specific peptidase 47 [Pan troglodytes]
gi|410354079|gb|JAA43643.1| ubiquitin specific peptidase 47 [Pan troglodytes]
Length = 1287
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|403254250|ref|XP_003919888.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Saimiri
boliviensis boliviensis]
Length = 1287
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|363750043|ref|XP_003645239.1| hypothetical protein Ecym_2717 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888872|gb|AET38422.1| Hypothetical protein Ecym_2717 [Eremothecium cymbalariae
DBVPG#7215]
Length = 483
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
K ++ P PGE PS IYDL V+ H+G SGHY A I+D+ +W+
Sbjct: 398 KALSPPDLRPGE--------NPS---CIYDLIGVITHQGANSESGHYQAFIRDDADEKWY 446
Query: 63 EFDDEHVSNL 72
FDD+ V+ +
Sbjct: 447 RFDDDKVTAI 456
>gi|194883136|ref|XP_001975660.1| GG20435 [Drosophila erecta]
gi|190658847|gb|EDV56060.1| GG20435 [Drosophila erecta]
Length = 980
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDL-IYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E +M+ + + + ++ IY+LS+V+ H GT V SGHY ++ G+W
Sbjct: 459 KISSDVYFPLEGFDMRPYIHKDCKSEVAIYNLSSVICHHGT-VGSGHYTCYARNALNGKW 517
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 518 YEFDDQFVTEV 528
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 13/191 (6%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E+ + C+ + L ++ + K + +L + P+ + FY I+ +WL +
Sbjct: 525 VTEVPSELVQSCQAYVLFYHKHNPQMKLVKDQAMTLSTSHPLCDSDIQFY-ITREWLSRL 583
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
A P ++N + C HG + SK + + IS W+ + + GGPA+ C
Sbjct: 584 ATFSEPGPINNQEMLCPHGGILHSKADVISQIAVPISQPLWDYLYRTFGGGPAVNIIFEC 643
Query: 299 MTCLIDGAHTVVCADSYR-DRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDA 357
C A T+ Y + GL ++ S + Y ++ WL+ W +
Sbjct: 644 EICK-RAAETLSRRQQYELNEFTKYNGLQNEFDSTAI----YAIAMPWLRSWQQFSR--G 696
Query: 358 PSEADGGPTTS 368
+ D GP T+
Sbjct: 697 KTHKDPGPITN 707
>gi|350580295|ref|XP_003123025.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47, partial [Sus
scrofa]
Length = 1079
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 189 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 231
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 376 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 435
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 436 --GRWFHFNDSTVT 447
>gi|401883325|gb|EJT47539.1| hypothetical protein A1Q1_03598 [Trichosporon asahii var. asahii
CBS 2479]
Length = 935
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 28/235 (11%)
Query: 256 IQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMTCLIDGAHTVVCADSY 315
+ C H ++ K ++ +S A+++ P + D C TC ++ T S
Sbjct: 527 VMCKHQRIDPEKTKDLRLVSRSAFDRI---KQVNPDIPEVDVCATC-VEAEFTRRTQRS- 581
Query: 316 RDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQ 375
++ + +K + L+ + Y + ++WL++W +K +D P P +RC HGQ
Sbjct: 582 -NKEEQVKAFEE--LNSSSGDQDYLLPRAWLKEWKGKKGIDVPPT---DPDYDLRCEHGQ 635
Query: 376 LMPEKAGGAKRLLVPEI-LWLFIYEDAMKVKPDDLLGCSTFPLDSEECPECSDALSEVAC 434
L VP L + +A+ + F + +C EC+ + ++
Sbjct: 636 LY-----------VPHTSLVSNVTAEAVALLQSIFGDFPVFTDNDVQCDECAVSEAQKQS 684
Query: 435 LEDSIRARKLKERQNHEKLALGK-SIPLSLDCKYYLLPSTWLTKWRNYISPSGKN 488
+ RAR E+ KLA + +I L YLLP + +W ++ G +
Sbjct: 685 DYNEWRARAADEK----KLAKNQLNITQILGIDNYLLPKKFFAEWEAWMRGKGAD 735
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 1 MKKKITSPFCFPGE-LNMQRRLSEPSQL---DLIYDLSAVLIHKGTAVNSGHYIALIKDE 56
++ K+ + FP L+M+ L EP + +YDL+AV++H G+ V SGHY A E
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE 479
Query: 57 NTGQWWEFDDEHVS 70
G+W+ F+D V+
Sbjct: 480 --GRWFHFNDSTVT 491
>gi|395815265|ref|XP_003781152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 47 [Otolemur
garnettii]
Length = 1287
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 397 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 439
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 15 LNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
LNM + PS +YDL AV H G A+ GHY A K++ G+W+ FDD +VS
Sbjct: 802 LNMSEFVCNPSARPYVYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVS 856
>gi|355728108|gb|AES09418.1| ubiquitin specific peptidase 47 [Mustela putorius furo]
Length = 1236
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNL 72
LIY+L +V++H G+A GHY A IK + QW+ F+D+HVS +
Sbjct: 384 LIYELFSVMVHSGSAAG-GHYYACIKSFSDEQWYSFNDQHVSRI 426
>gi|320039888|gb|EFW21822.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str. Silveira]
Length = 1079
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 29 LIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVSNLGHHPFGEGSS 82
IY+ AV+ H G+ ++ GHYI+L++D N W +FDD V++ P GSS
Sbjct: 1009 FIYNAYAVVRHLGSTIHEGHYISLVRDANRDCWRKFDDHRVTDF--QPGNPGSS 1060
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,956,489,128
Number of Sequences: 23463169
Number of extensions: 579898304
Number of successful extensions: 1237871
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 2818
Number of HSP's that attempted gapping in prelim test: 1232834
Number of HSP's gapped (non-prelim): 5571
length of query: 773
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 622
effective length of database: 8,816,256,848
effective search space: 5483711759456
effective search space used: 5483711759456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)