BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004117
(773 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana
GN=UBP26 PE=1 SV=3
Length = 1067
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/776 (56%), Positives = 566/776 (72%), Gaps = 27/776 (3%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKITS F FP L+M RL+E SQ L YDLSAVLIHKG+AVNSGHY+A IKDE TG W
Sbjct: 313 KKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVD--VHLPSSE 119
WEFDDEHVS LG P E SSS+ P SE A+ ++ + SS+
Sbjct: 373 WEFDDEHVSELGKRPCNEASSST-------------PQSESNGTASSGNITDGIQSGSSD 419
Query: 120 YYNGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ E F+S+DAYMLMY+LR DK++++ + ++ + E + + +LP HL
Sbjct: 420 CRSAIKSEVFSSSDAYMLMYSLRCDKQENQEGQKENPIDITKGEVKQL---KGGYLPKHL 476
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ I +N +L+ C+Q+ LRK +EL+ ++ER+QEVR++LSEA V SLEE ++WIS+DWL
Sbjct: 477 SEWINNMNAVFLESCKQYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWL 536
Query: 240 RQWADKIFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCM 299
R WAD P LDNT + C HGKV SK+ MKRIS AW K K+NGGP L DYC
Sbjct: 537 RLWADTTLPPALDNTPLLCSHGKVHASKVNCMKRISELAWIKLESKFNGGPKLGKGDYCR 596
Query: 300 TCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPS 359
CL+DGA VV +DSYRDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+
Sbjct: 597 DCLMDGARMVVSSDSYRDRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPT 656
Query: 360 EADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDS 419
EAD GPT +I C HG+LMPE+A GAKR++VPE W F++EDA+KV +D L C+ FP+DS
Sbjct: 657 EADAGPTNAITCNHGELMPEQAPGAKRVVVPENFWSFLFEDALKVMSEDTLDCTCFPVDS 716
Query: 420 EECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWR 479
+C C++ LSEVAC EDS+R K+K+RQNHEKLA GK IPL+ +Y+LLPS WL +WR
Sbjct: 717 SQCCHCTEVLSEVACFEDSLRTLKVKQRQNHEKLATGKGIPLTPQSRYFLLPSPWLVQWR 776
Query: 480 NYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQKGSATDGLTI 538
YI+ +GKN+SS EPE LDGVI++LKC+KH RLLER P+LVC+RGS +QK +TD LTI
Sbjct: 777 IYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKLTI 836
Query: 539 VTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCGPRDEENNEIE 598
+ E DWK+FC+EWGG+ E G+S ++ GN S +++ E+ P D N +++
Sbjct: 837 IPELDWKYFCDEWGGLMENGISAFIE----VGNTDQSSSPDVIDLEKDSSPDD--NMDVD 890
Query: 599 SQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSILEASESMFEP 658
+Q+ ++R PEICE+CIGERESCELMQKL+Y + D+ V VRGKEAP+++LEAS+S FE
Sbjct: 891 AQQLILRASPEICEECIGERESCELMQKLSYSEGDVFVCFVRGKEAPKAMLEASDSSFEV 950
Query: 659 DRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECAT 716
DRR SKRSR+T + +LKVSA+T++YQLKMMIWE LGV+KENQ LHKG ++IDQE AT
Sbjct: 951 DRRTSKRSRRTNYGNLTSLKVSATTTVYQLKMMIWELLGVMKENQELHKGSKVIDQESAT 1010
Query: 717 LADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTSNLSSQV 772
LAD+NIFPGD+LWV+D+E+HEHRDIADEL ++K Q +EEGFRGTLLT N+SS+
Sbjct: 1011 LADMNIFPGDRLWVRDTEMHEHRDIADELCEKKPGAQDIEEGFRGTLLTGNISSEA 1066
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/786 (52%), Positives = 543/786 (69%), Gaps = 43/786 (5%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS PS Y LSA+LIHKG+A NSGHY+A +KDE+ GQW
Sbjct: 314 KKKISSAFSFPGQLDMGKRLSNPSS-SYTYGLSAILIHKGSAANSGHYVAHVKDESNGQW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDEHVS LG HPFGE S K + Q S N+++ H + +
Sbjct: 373 WEFDDEHVSKLGLHPFGEKPGKSSDKTDQKP----QGSSTADSVTNDDNNSCHEAA---F 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ E F+S DAYMLMY K + D N +E + + LP H
Sbjct: 426 TSTMEEMFSSTDAYMLMY-----------KRIAKDENGIESNNISSNNS----LPHHFVD 470
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N SY+ CE+++ +K+ L I+ER+QEV+S+L+EAP E+ ++WIS+DWLRQ
Sbjct: 471 EIDERNTSYVKECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQ 530
Query: 242 WADKIFP-----------STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP 290
WAD + P S++DN+ IQC HGKVP SK+ SMKR+S+ AW+K F KY GGP
Sbjct: 531 WADNVNPPSPIITGVRVHSSIDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGP 590
Query: 291 ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQW 349
L++DD+CM CL DGA V AD YRDR+ SL+ +A+ L+G +G Y+VS+ WL QW
Sbjct: 591 TLSSDDFCMECLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQW 650
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD+
Sbjct: 651 LRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDI 709
Query: 410 LGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYL 469
+ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL
Sbjct: 710 V---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYL 766
Query: 470 LPSTWLTKWRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQ 528
+PS+WL++WR YI+ +GKN SS+ EP+ L+ I+SL CEKH RLL+RP DLVCKRG+I Q
Sbjct: 767 VPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQ 826
Query: 529 KGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCG 588
K S TDGLT+++E+DW F EEW KGL + FS ++ + L S +L E+
Sbjct: 827 KASNTDGLTMISESDWILFSEEWNVAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQ 886
Query: 589 PRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSI 648
++ +N++ + P VRT PE+CE+CIGE+ESC L++KLNY ++DI V+LVRGKEAP+SI
Sbjct: 887 STNDLSNDLGGREPYVRTDPEVCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSI 946
Query: 649 LEASESMFEPDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKG 706
EAS ++ PDRR SKRSR+T + ++LKVS ST++YQLK+MIWESLG+VKENQ LHKG
Sbjct: 947 REASAAVPVPDRRTSKRSRRTTSGNSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKG 1006
Query: 707 QRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTS 766
I+ + ATLAD IFPGD LWV+DSEI+E+RDIADE+S+QK+ VQ EEGFRGTLLTS
Sbjct: 1007 SVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQ-TEEGFRGTLLTS 1065
Query: 767 NLSSQV 772
+ S+Q+
Sbjct: 1066 SASAQL 1071
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/786 (52%), Positives = 544/786 (69%), Gaps = 43/786 (5%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKKI+S F FPG+L+M +RLS PS Y LSA+LIHKG+A NSGHY+A +KDE+ GQW
Sbjct: 314 KKKISSAFSFPGQLDMGKRLSNPSS-SYTYGLSAILIHKGSAANSGHYVAHVKDESNGQW 372
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
WEFDDEHVS LG HPFGE S +K + Q S N+++ H + +
Sbjct: 373 WEFDDEHVSKLGLHPFGEKPGKSSNKTDQKP----QGSSTADSVTNDDNNSCHEAA---F 425
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
+ E F+S DAYMLMY K + D N +E + + LP H
Sbjct: 426 TSTMEEMFSSTDAYMLMY-----------KRIAKDENGIESNNISSNNS----LPHHFVD 470
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+I E N SY+ CE+++ +K+ L I+ER+QEV+S+L+EAP E+ ++WIS+DWLRQ
Sbjct: 471 EIDERNTSYVKECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQ 530
Query: 242 WADKIFP-----------STLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGP 290
WAD + P S++DN+ IQC HGKVP SK+ SMKR+S+ AW+K F KY GGP
Sbjct: 531 WADNVNPPSPIITGVRVHSSIDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGP 590
Query: 291 ALTNDDYCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQW 349
L++DD+CM CL DGA V AD YRDR+ SL+ +A+ L+G +G Y+VS+ WL QW
Sbjct: 591 TLSSDDFCMECLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQW 650
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDL 409
RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD+
Sbjct: 651 LRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDI 709
Query: 410 LGCSTFPLDSEECPECSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYL 469
+ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL
Sbjct: 710 V---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYL 766
Query: 470 LPSTWLTKWRNYISPSGKNASSI-EPEILDGVIDSLKCEKHLRLLERPPDLVCKRGSIYQ 528
+PS+WL++WR YI+ +GKN SS+ EP+ L+ I+SL CEKH RLL+RP DLVCKRG+I Q
Sbjct: 767 VPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQ 826
Query: 529 KGSATDGLTIVTENDWKWFCEEWGGIKEKGLSVIVDFSNNAGNELVGSCKEILLSEEPCG 588
K S TDGLT+++E+DW F EEW KGL + FS ++ + L S +L E+
Sbjct: 827 KASNTDGLTMISESDWILFSEEWNVAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQ 886
Query: 589 PRDEENNEIESQRPVVRTFPEICEDCIGERESCELMQKLNYCDKDISVFLVRGKEAPRSI 648
++ +N++ + P VRT PE+CE+CIGE+ESC L++KLNY ++DI V+LVRGKEAP+SI
Sbjct: 887 STNDLSNDLGGREPYVRTDPEVCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSI 946
Query: 649 LEASESMFEPDRRASKRSRKTR--SFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKG 706
EAS ++ PDRR SKRSR+T + ++LKVS ST++YQLK+MIWESLG+VKENQ LHKG
Sbjct: 947 REASAAVPVPDRRTSKRSRRTTSGNSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKG 1006
Query: 707 QRIIDQECATLADLNIFPGDKLWVQDSEIHEHRDIADELSDQKMNVQHVEEGFRGTLLTS 766
I+ + ATLAD IFPGD LWV+DSEI+E+RDIADE+S+QK+ VQ EEGFRGTLLTS
Sbjct: 1007 SVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQ-TEEGFRGTLLTS 1065
Query: 767 NLSSQV 772
+ S+Q+
Sbjct: 1066 SASAQL 1071
>sp|Q3V0C5|UBP48_MOUSE Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus GN=Usp48
PE=1 SV=2
Length = 1052
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 214/530 (40%), Gaps = 116/530 (21%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G + E +E PS
Sbjct: 367 YKFNDEDIEKMEGKKLQLG------------------IEEDLE-----------PSKSQT 397
Query: 122 NGSNVERFT--SNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHL 179
+ T S +AYML+Y L+ +++ V P+ L
Sbjct: 398 RKPKCGKGTHCSRNAYMLVYRLQAQEKNHTMVQV----------------------PAFL 435
Query: 180 GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWL 239
+ + N + + C + + + +D + +EV+ L P + EP+ ++S +WL
Sbjct: 436 QELVDRDNSKFEEWCVEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWL 493
Query: 240 RQWADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYC 298
++W D+ P+ +DN + C H K+ KI MKRIS A N F+ +Y GGP LT C
Sbjct: 494 QKWLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAANIFYSRYGGGPRLTVKALC 553
Query: 299 MTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAP 358
C+++ + + + K++ L + G ++V KS L+ W R+ L+
Sbjct: 554 KDCVVERCRVLRLKNQLNEDYKAVNNLLKSTMKGD----GFWVGKSSLRSW-RQLALEQL 608
Query: 359 SEADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLL 388
E DG S I CPHG+L +R L
Sbjct: 609 DEQDGEAEQSNGKINGSTFNKDESKEEKKEEEEELNFNEDILCPHGEL---SISENERRL 665
Query: 389 VPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSI 439
V + W + + K FP E C +C ++AL ++ E
Sbjct: 666 VSQEAWSKLQQYFPKA--------PEFPSYRECCSQCKILEREGEENEALHKMIANEQKT 717
Query: 440 RARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
L + +N L+ + P D Y++ +L +WR ++ ++A
Sbjct: 718 SLPNLFQDKNRPCLS---NWPEDTDA-LYIVSHFFLDEWRKFVRKPARSA 763
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 950 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 1009
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 1010 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1049
>sp|Q76LT8|UBP48_RAT Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus
GN=Usp48 PE=1 SV=1
Length = 1036
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 213/528 (40%), Gaps = 110/528 (20%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G W
Sbjct: 308 KKKLNAYIGFSESLDMEPYV-EHKGGSFVYELSAVLIHRGVSAYSGHYIAHVKDPQSGDW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLTEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ +++ V P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKNHTMVQV----------------------PAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCVEMAEMRRQSVDKGRAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNNACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKD 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKATMKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS------------------------------IRCPHGQLMPEKAGGAKRLLVP 390
DG S I CPHG+L +R LV
Sbjct: 613 QDGEAEQSNGKINGSPFSKDESKEEKKEEEEELNFNEDILCPHGEL---SISENERRLVS 669
Query: 391 EILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPEC---------SDALSEVACLEDSIRA 441
+ W + + K FP E C +C ++AL ++ E
Sbjct: 670 QEAWSKLQQYFPKA--------PEFPSYKECCSQCKILEREGEENEALHKMIAKEQKTSL 721
Query: 442 RKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYISPSGKNA 489
L + +N L+ + P D Y++ +L +WR ++ ++
Sbjct: 722 PNLFQDKNRPCLS---NWPEDTDA-LYIVSHFFLDEWRKFVRKPARST 765
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I++ +CATL L
Sbjct: 934 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILNDDCATLGTL 993
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 994 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1033
>sp|Q86UV5|UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48
PE=1 SV=1
Length = 1035
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 165/368 (44%), Gaps = 56/368 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + E +Y+LSAVLIH+G + SGHYIA +KD +G+W
Sbjct: 308 KKKLNTYIGFSEILDMEPYV-EHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 367 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 409
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ N + +P+ L +
Sbjct: 410 ---------SRNAYMLVYRLQTQEKP----------------------NTTVQVPAFLQE 438
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
+ N + + C + + + +D + +EV+ L P + EP+ ++S +WL++
Sbjct: 439 LVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGA--EPYEFVSLEWLQK 496
Query: 242 WADKIFPST-LDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P+ +DN + C H K+ KI MKRIS A + F+ +Y GGP LT C
Sbjct: 497 WLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKE 556
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G ++V KS L+ W R+ L+ E
Sbjct: 557 CVVERCRILRLKNQLNEDYKTVNNLLKAAVKGS---DGFWVGKSSLRSW-RQLALEQLDE 612
Query: 361 ADGGPTTS 368
DG S
Sbjct: 613 QDGDAEQS 620
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ +CATL L
Sbjct: 933 RRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTL 992
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
+ P + ++ E IAD + D M V EEGF+GT L
Sbjct: 993 GVIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1032
>sp|Q5ZM45|UBP48_CHICK Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus GN=USP48
PE=2 SV=1
Length = 1033
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 56/362 (15%)
Query: 2 KKKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KKK+ + F L+M+ + + + + +Y+LSAVLIH+G + SGHYIA +KD TG+W
Sbjct: 306 KKKLNTYIGFSELLDMEPFMEQKNGV-YVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW 364
Query: 62 WEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYY 121
++F+DE + + G ++ +S+ + + + H
Sbjct: 365 YKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQ-------TRKPKCGKGTHC---------- 407
Query: 122 NGSNVERFTSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESEMIFFNDDIFLPSHLGK 181
S +AYML+Y L+ ++ K + +V P+ L +
Sbjct: 408 ---------SRNAYMLVYRLQ-----TREKSLTVEV------------------PAFLQE 435
Query: 182 DIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQ 241
++ N + + C + + + + + +EV+ L P + P+ +IS +WL++
Sbjct: 436 LVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEA-GSPYDFISLEWLQK 494
Query: 242 WADK-IFPSTLDNTSIQCLHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALTNDDYCMT 300
W D+ P +DNT+ C HGK+ KI MKRIS + F+ +Y GGP L C
Sbjct: 495 WLDESTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYRRYGGGPRLNVKALCKD 554
Query: 301 CLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSE 360
C+++ + + + K++ L + G EG ++V K+ L+ W R+ L+ +E
Sbjct: 555 CVVERCRILRLKNQLNEDYKTVTNLLKITVKGS--EG-FWVGKASLRSW-RQLALEQLNE 610
Query: 361 AD 362
D
Sbjct: 611 QD 612
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 661 RASKRSRKTRSFVNLKVSASTSIYQLKMMIWESLGVVKENQILHKGQRIIDQECATLADL 720
R S R RK R L VSA+ ++ +LK+ I + V +Q L +I+ + ATL L
Sbjct: 931 RRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLLIDGKILSDDTATLGSL 990
Query: 721 NIFPGDKLWVQDSEIHEHRDIADELS-DQKMNVQHVEEGFRGTLL 764
I P + ++ E IAD + D M V EEGF+GT L
Sbjct: 991 GIIPESVILLKADE-----PIADYAAMDDVMQVCMPEEGFKGTGL 1030
>sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33
PE=1 SV=2
Length = 942
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 692 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 748
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 749 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 808
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 809 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESF 861
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M + GA + E W F+
Sbjct: 862 VKGKDGDPPGPIDNTKIAVTKC--GNVMLRQ--GADSGQISEETWNFL 905
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 685
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 686 WYEFDDQSVTEV 697
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWNKFF 283
FY IS W R+W D P +DNT I G V + +IS + WN
Sbjct: 847 FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEETWNFLQ 906
Query: 284 FKYNGGPAL 292
Y GGP +
Sbjct: 907 SIYGGGPEV 915
>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
PE=2 SV=1
Length = 912
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 662 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 719 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ A+ RRK+ + + + T+Y +S W ++W
Sbjct: 779 ICHTCQIE-------AEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 831
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G ++ + GA + E W F+
Sbjct: 832 VKGKDGDPPGPIDNTKIAVTKC--GNVILRQ--GADSGQISEETWNFL 875
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLSEPSQLDLI-YDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI++ FP E L++Q L++ S + ++ YDL +V+ H GTA +SGHYIA ++ W
Sbjct: 598 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTA-SSGHYIAYCRNNLNNLW 656
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 657 YEFDDQSVTEV 667
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWNKFF 283
FY IS W R+W D P +DNT I G V + +IS + WN
Sbjct: 817 FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVILRQGADSGQISEETWNFLQ 876
Query: 284 FKYNGGPAL 292
Y GGP +
Sbjct: 877 SIYGGGPEV 885
>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
PE=2 SV=1
Length = 914
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 15/225 (6%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 660 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K G ++ + W+ + +Y GGPA+ +
Sbjct: 717 KFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYY-VSKSWLQQW---TRR 352
C TC I+ + R + + + T+Y +S W ++W +
Sbjct: 777 ICHTCQIEAEEIEKKKKNRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKG 836
Query: 353 KNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
K+ D P D +C G +M + GA + E W F+
Sbjct: 837 KDGDPPGPIDNTKIAVTKC--GSVMLRQ--GADSGQISEETWNFL 877
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 653
Query: 61 WWEFDDEHVSNL 72
W+EFDD+ V+ +
Sbjct: 654 WYEFDDQSVTEV 665
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 231 FYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISSKAWNKFF 283
FY IS W R+W D P +DNT I G V + +IS + WN
Sbjct: 819 FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLRQGADSGQISEETWNFLQ 878
Query: 284 FKYNGGPAL 292
Y GGP +
Sbjct: 879 SIYGGGPEV 887
>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
GN=usp33 PE=2 SV=1
Length = 892
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ + + E + L + + + ++ V LL+ PSL + ++IS WL
Sbjct: 642 QSVTEVSEATVQNAEAYVLFYRKASEEAQKERRRVSCLLNIME-PSLLQ--FYISRQWLN 698
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG VP K ++ + W+ + +Y GGPA+ +
Sbjct: 699 KFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLVVMLPQNIWDYLYSRYGGGPAVNHLY 758
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C TC + + RRK + L + Y +S W ++W
Sbjct: 759 VCYTCQTE-------MEKIEKRRKMELETFIRLNKAFQEEESPAVIYCISMQWFREWEGF 811
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D + +C H L GA + E WLF+
Sbjct: 812 VKSKDSDPPGPIDNTKIAAAKCGHITLRQ----GADSGQISEETWLFL 855
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 130/325 (40%), Gaps = 71/325 (21%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI + FP E L++Q L++ PSQ+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 578 KIGTHVSFPLEGLDLQPFLAKDSPSQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 635
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENH-----VDVHL 115
W+EFDD+ V+ + S + V +E V E E +++
Sbjct: 636 WYEFDDQSVTEV-----------SEATVQNAEAYVLFYRKASEEAQKERRRVSCLLNIME 684
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 685 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASFIEDLV----------- 733
Query: 166 MIFFNDDIFLPSHL----------GKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEV 215
+ LP ++ G + L Y E K+ K R+++ E +
Sbjct: 734 -------VMLPQNIWDYLYSRYGGGPAVNHLYVCYTCQTEMEKIEKRRKMEL--ETFIRL 784
Query: 216 RSLLSEAPVPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKI 268
E P++ Y IS W R+W D P +DNT I G + +
Sbjct: 785 NKAFQEEESPAV---IYCISMQWFREWEGFVKSKDSDPPGPIDNTKIAAAKCGHITLRQG 841
Query: 269 GSMKRISSKAWNKFFFKYNGGPALT 293
+IS + W Y GGP +T
Sbjct: 842 ADSGQISEETWLFLQSIYGGGPEIT 866
>sp|A5PMR2|UBP33_DANRE Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33
PE=2 SV=1
Length = 897
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + D + +++V SL + PSL + +++S WL
Sbjct: 647 QSVTEVSESCVQNAEAYVLFYKKSNDETQKERRKVTSLFNMME-PSLLQ--FYVSRQWLN 703
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C HG +P +K + I W+ + +Y GGPA+ +
Sbjct: 704 KFKTFAEPGPISNHDFLCAHGGIPPNKAAYIDDLVLMIPQNVWDHLYSRYGGGPAVNHLY 763
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGT----YYVSKSWLQQW--- 349
C TC + + RRK+ + + E + Y +S W ++W
Sbjct: 764 VCHTCQNE-------IEKLEKRRKNELDMFVRLNKAFQEEESPVVIYCISMQWFREWESF 816
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIY 398
+ K++D P D + H L P GA + E W F++
Sbjct: 817 VKGKDIDPPGPIDNSKIAVNKNGHITLKP----GADSGQISEETWNFLH 861
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI + FP E L MQ L+ + S L YDL +V+ H GTA +SGHYIA ++E W
Sbjct: 583 KIGTHVSFPLEGLEMQPFLAKDSSALTTTYDLLSVICHHGTA-SSGHYIAYCRNELNQLW 641
Query: 62 WEFDDEHVSNL 72
+EFDD+ V+ +
Sbjct: 642 YEFDDQSVTEV 652
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 14/106 (13%)
Query: 195 EQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW------ADKIFP 248
E+ + R+ ELD + + E+PV Y IS W R+W D P
Sbjct: 773 EKLEKRRKNELDMFVRLNKAFQE--EESPVV-----IYCISMQWFREWESFVKGKDIDPP 825
Query: 249 STLDNTSIQC-LHGKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
+DN+ I +G + +IS + WN + GGP +T
Sbjct: 826 GPIDNSKIAVNKNGHITLKPGADSGQISEETWNFLHNIHGGGPVVT 871
>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
PE=1 SV=2
Length = 909
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 181 KDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ + E++ S + E + L + + + ++ + +LL+ PSL + ++IS WL
Sbjct: 659 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME-PSLLQ--FYISRQWLN 715
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMK----RISSKAWNKFFFKYNGGPALTNDD 296
++ P + N C+HG +P K ++ + W+ + +Y GGPA+ +
Sbjct: 716 KFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLY 775
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGL---ADDVLSGKLVEGTYY-VSKSWLQQW--- 349
C TC I+ + RRK+ + + + T+Y +S W ++W
Sbjct: 776 ICHTCQIE-------LEKIEKRRKTELEIFIRLNRAFQEEDSPATFYCISMQWFREWESF 828
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ D P D +C G +M ++ GA + E W F+
Sbjct: 829 VKGKDGDPPGPIDNTKIAVTKC--GSVMLKQ--GADSGQISEETWNFL 872
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI++ FP E L++Q L++ P+Q+ + YDL +V+ H GTA +SGHYIA ++
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQI-VTYDLLSVICHHGTA-SSGHYIAYCRNNLNNL 652
Query: 61 WWEFDDEHVSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANE-----NHVDVHL 115
W+EFDD+ V+ + S S V +E V E E N +++
Sbjct: 653 WYEFDDQSVTEV-----------SESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIME 701
Query: 116 PS--SEYYNGSNVERF--------TSNDAYMLMYNLRRDKEDSKRKDVVHDVNNMEIESE 165
PS Y + + +F SN+ ++ ++ ++ S +D+V
Sbjct: 702 PSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGIPPRKASYIEDLVL---------- 751
Query: 166 MIFFN--DDIFLPSHLGKDIKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAP 223
M+ N D+++ G + L + E K+ K R+ + E + E
Sbjct: 752 MLPQNIWDNLYSRYGGGPAVNHLYICHTCQIELEKIEKRRKTEL--EIFIRLNRAFQEED 809
Query: 224 VPSLEEPFYWISSDWLRQW------ADKIFPSTLDNTSIQCLH-GKVPESKIGSMKRISS 276
P+ FY IS W R+W D P +DNT I G V + +IS
Sbjct: 810 SPAT---FYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGSVMLKQGADSGQISE 866
Query: 277 KAWNKFFFKYNGGPAL 292
+ WN Y GGP +
Sbjct: 867 ETWNFLQSIYGGGPEV 882
>sp|A5PN09|UBP20_DANRE Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20
PE=2 SV=1
Length = 911
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 4 KITSPFCFPGE-LNMQRRLSE--PSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQ 60
KI S FP E L+++ L++ PSQ+ YDL +V+ H GTA SGHYIA ++ GQ
Sbjct: 598 KINSHVSFPLEGLDLKPFLAKESPSQIT-TYDLLSVICHHGTA-GSGHYIAYCQNVINGQ 655
Query: 61 WWEFDDEHVSNL 72
W+EFDD++V+ +
Sbjct: 656 WYEFDDQYVTEV 667
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER++ V L+ PSL + ++IS +WL
Sbjct: 664 VTEVHETVVQNAEAYVLFYRKSSE-ESVRERQRVVA--LANLKEPSLLQ--FYISREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFTEPGPITNHTFLCQHGGIPPTKYHYVDDLVVILPQNVWEYLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ ++ RRK + L + + + +S W ++W
Sbjct: 779 VCAICQVE-------IETLAKRRKLEIDTFIKLNKEFQAEEAPTVILCISMQWFREWENF 831
Query: 350 TRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ K+ + P D ++ H QL GA + E W ++
Sbjct: 832 VKGKDNEPPGPIDNSKIAVMKGGHIQL----KQGADYGQISEETWQYL 875
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 195 EQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW------ADKIFP 248
E R+ E+D + +E ++ EAP L IS W R+W D P
Sbjct: 788 ETLAKRRKLEIDTFIKLNKEFQA--EEAPTVIL-----CISMQWFREWENFVKGKDNEPP 840
Query: 249 STLDNTSIQCLHGKVPESKIGS-MKRISSKAWNKFFFKYNGGPALT 293
+DN+ I + G + K G+ +IS + W Y GGP +
Sbjct: 841 GPIDNSKIAVMKGGHIQLKQGADYGQISEETWQYLLSIYGGGPEIA 886
>sp|D6RJB6|U17LK_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 20 OS=Homo
sapiens GN=USP17L20 PE=3 SV=1
Length = 530
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|D6R901|U17LL_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 21 OS=Homo
sapiens GN=USP17L21 PE=3 SV=1
Length = 530
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q0WX57|U17LO_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 24 OS=Homo
sapiens GN=USP17L24 PE=1 SV=2
Length = 530
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|A8MUK1|U17L5_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo
sapiens GN=USP17L5 PE=2 SV=2
Length = 530
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|C9JPN9|UL17C_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 12 OS=Homo
sapiens GN=USP17L12 PE=3 SV=1
Length = 530
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+P+ L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + S+ LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 269 KLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 326
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISK 352
>sp|B1AQJ2|UBP36_MOUSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36
PE=2 SV=1
Length = 1098
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ S ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
PE=2 SV=1
Length = 912
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI+S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 596 KISSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 654
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 655 YEFDDQYVTEV 665
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 662 VTEVHETVVQNAEAYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 716
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 717 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQNVWEHLYSRFGGGPAVNHLY 776
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 777 VCSICQVE---IEALAKRRRVEIDTFIKLNKAFQAEESPSVIYCISMQWFREWEAFVKGK 833
Query: 354 NLDAPSEADGGPTTSIR-CPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ H QL P GA + E W+++
Sbjct: 834 DNEPPGPIDNSRIAQVKGSGHIQLKP----GADYGQISEETWVYL 874
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Query: 9 FCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
C N+++ S+ + +Y+L +V++H G+A GHY A IK GQW+ F+D+H
Sbjct: 450 ICLETNSNIEKLNKSVSEKNSLYELFSVMVHSGSAAG-GHYYACIKSFADGQWYSFNDQH 508
Query: 69 VSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVER 128
VS + + + + G+ N YY+ +
Sbjct: 509 VSRITQ----------------------EDIKKTYGGSTGNR--------GYYSSAFA-- 536
Query: 129 FTSNDAYMLMYNLRRDKEDSKRKDVV 154
+S +AYMLMY L+ ++K + +
Sbjct: 537 -SSTNAYMLMYRLKNPARNAKFPEAI 561
>sp|Q8C6M1|UBP20_MOUSE Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20
PE=1 SV=1
Length = 916
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
K++S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 600 KVSSHVSFPLEGLDLRPFLAKECTSQVTTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 658
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 659 YEFDDQYVTEV 669
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 666 VTEVHETVVQNVEAYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 720
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P +K + + W + ++ GGPA+ +
Sbjct: 721 KFNTFAEPGPITNHTFLCSHGGIPPNKYHYIDDLVVILPQSVWEHLYSRFGGGPAVNHLY 780
Query: 297 YCMTCLID----GAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW--- 349
C C ++ V D++ K+ + + Y +S W ++W
Sbjct: 781 VCSICQVEIEALAKRRRVEIDTFIKLNKAFQAEESPAV-------IYCISMHWFREWEAF 833
Query: 350 TRRKNLDAPSEADGGPTTSIR 370
+ K+ + P D ++
Sbjct: 834 VKGKDSEPPGPIDNSRIAQVK 854
>sp|Q5R5Z6|UBP20_PONAB Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii GN=USP20
PE=2 SV=1
Length = 913
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 597 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 655
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 656 YEFDDQYVTEV 666
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 663 VTEVHETVVQNAEGYVLFYRKSSE-EAVRERQQVVS--LAAMREPSLLR--FYVSREWLN 717
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 718 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 777
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 778 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGIIYCISMQWFREWEAFVKGK 834
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 835 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 875
>sp|Q9Y2K6|UBP20_HUMAN Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20
PE=1 SV=2
Length = 914
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E L+++ L+ E + YDL +V+ H GTA SGHYIA ++ GQW
Sbjct: 598 KINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQW 656
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 657 YEFDDQYVTEV 667
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 20/224 (8%)
Query: 183 IKELNRSYLDGCEQFKL--RKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLR 240
+ E++ + + E + L RK+ E + + ER+Q V L+ PSL +++S +WL
Sbjct: 664 VTEVHETVVQNAEGYVLFYRKSSE-EAMRERQQVVS--LAAMREPSLLR--FYVSREWLN 718
Query: 241 QWADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDD 296
++ P + N + C HG +P K + + W + ++ GGPA+ +
Sbjct: 719 KFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLY 778
Query: 297 YCMTCLIDGAHTVVCADSYRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQW---TRRK 353
C C ++ A R + L + + Y +S W ++W + K
Sbjct: 779 VCSICQVE---IEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGK 835
Query: 354 NLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFI 397
+ + P D ++ G + GA + E W ++
Sbjct: 836 DNEPPGPIDNSRIAQVK---GSGHVQLKQGADYGQISEETWTYL 876
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K++ FP EL + + LD +YDL AV++H G+ N GHYI ++K G W
Sbjct: 273 KLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSH--GFWLL 330
Query: 64 FDDEHVSNLGHHPFGE--GSSSSGSK 87
FDD+ V + E G +S SK
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISK 356
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + E +D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 267 KKLSYRVVFPLELKLSNTVDE--YVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 322
Query: 63 EFDDEHV 69
FDDE V
Sbjct: 323 FFDDESV 329
>sp|D6R9N7|U17LI_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 18 OS=Homo
sapiens GN=USP17L18 PE=3 SV=1
Length = 530
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|D6RCP7|U17LJ_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 19 OS=Homo
sapiens GN=USP17L19 PE=3 SV=1
Length = 530
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|C9JVI0|U17LB_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 11 OS=Homo
sapiens GN=USP17L11 PE=3 SV=1
Length = 530
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQTNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 9 FCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEH 68
C N+++ ++ + +Y+L +V++H G+A GHY A IK GQW+ F+D+H
Sbjct: 449 ICLETNSNIEKLNKSVAEKNSLYELFSVMVHSGSAAG-GHYYACIKSFADGQWYSFNDQH 507
Query: 69 VSNLGHHPFGEGSSSSGSKVVRSEPVVCQPVSERVEGANENHVDVHLPSSEYYNGSNVER 128
VS + + + + GA N YY+ +
Sbjct: 508 VSRITQ----------------------EDIKKTYGGATGNR--------GYYSSAFA-- 535
Query: 129 FTSNDAYMLMYNLR 142
+S +AYMLMY L+
Sbjct: 536 -SSTNAYMLMYRLK 548
>sp|D6RA61|U17LM_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 22 OS=Homo
sapiens GN=USP17L22 PE=3 SV=1
Length = 530
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q7M764|U17L2_MOUSE Ubiquitin carboxyl-terminal hydrolase 17 OS=Mus musculus GN=Usp17l2
PE=3 SV=2
Length = 540
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G NSGHY +K G+W++
Sbjct: 297 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSNSGHYFCCVK-AGHGKWYK 355
Query: 64 FDDEHVS 70
DD V+
Sbjct: 356 MDDTKVT 362
>sp|C9JLJ4|U17LD_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 13 OS=Homo
sapiens GN=USP17L13 PE=2 SV=1
Length = 530
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|D6RBQ6|U17LH_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 17 OS=Homo
sapiens GN=USP17L17 PE=3 SV=1
Length = 530
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q6QN14|U17L6_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 OS=Homo
sapiens GN=USP17L6 PE=1 SV=2
Length = 398
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
GN=usp20 PE=2 SV=1
Length = 884
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E LN++ L+ E YDL AV+ H G+A +SGHYI+ ++ GQW
Sbjct: 568 KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSA-SSGHYISYCQNVINGQW 626
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 627 YEFDDQYVTEV 637
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL + L+ ++IS +WL ++
Sbjct: 634 VTEVHETVVQNAEAYVLFYRKSSEEAERERQKVVSLAAMKESGLLQ---FYISREWLNKF 690
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N S C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 691 NTFAEPGPISNQSFLCSHGGIPPNKYHYIDDLVVILPQSVWEYLYNRFGGGPAVNHLYVC 750
Query: 299 MTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
C ++ ++ RRK + L + + Y +S W ++W +
Sbjct: 751 SICQVE-------IEALAKRRKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVK 803
Query: 352 RKNLDAPSEAD 362
K+ D P D
Sbjct: 804 AKDSDPPGPID 814
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 211 RKQEVRSLLSEAPVPSLEEP---FYWISSDWLRQW------ADKIFPSTLDNTSIQCLH- 260
RK E+ + + EE Y IS W R+W D P +DN+ +
Sbjct: 764 RKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVKAKDSDPPGPIDNSKVALTKS 823
Query: 261 -GKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
G+V + +IS + WN Y GGP +
Sbjct: 824 SGQVQLKQGADYGQISEETWNYLLNVYGGGPEIA 857
>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
PE=2 SV=1
Length = 840
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGE-LNMQRRLS-EPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQW 61
KI S FP E LN++ L+ E YDL AV+ H G+A +SGHYI+ ++ GQW
Sbjct: 524 KIGSHVSFPLEGLNLRPFLAKECVSRITTYDLLAVICHHGSA-SSGHYISYCQNVINGQW 582
Query: 62 WEFDDEHVSNL 72
+EFDD++V+ +
Sbjct: 583 YEFDDQYVTEV 593
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 183 IKELNRSYLDGCEQFKLRKNRELDCISERKQEVRSLLSEAPVPSLEEPFYWISSDWLRQW 242
+ E++ + + E + L + + +Q+V SL + L+ ++IS +WL ++
Sbjct: 590 VTEVHETVVQNAEAYVLFYRKSSEEAERERQKVVSLAAMKESGLLQ---FYISREWLNKF 646
Query: 243 ADKIFPSTLDNTSIQCLHGKVPESKIGSMKR----ISSKAWNKFFFKYNGGPALTNDDYC 298
P + N S C HG +P +K + + W + ++ GGPA+ + C
Sbjct: 647 NTFAEPGPISNQSFLCAHGGIPPNKYHYIDDLVVILPQSVWEYLYNRFGGGPAVNHLYVC 706
Query: 299 MTCLIDGAHTVVCADSYRDRRK----SLKGLADDVLSGKLVEGTYYVSKSWLQQW---TR 351
C ++ ++ RRK + L + + Y +S W ++W +
Sbjct: 707 SICQVE-------IEALAKRRKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVK 759
Query: 352 RKNLDAPSEAD 362
K+ D P D
Sbjct: 760 AKDSDPPGPID 770
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 211 RKQEVRSLLSEAPVPSLEEP---FYWISSDWLRQW------ADKIFPSTLDNTSIQCLH- 260
RK E+ + + EE Y IS W R+W D P +DN+ +
Sbjct: 720 RKTEIDTFIKLNKAFQAEEAPSVIYCISMQWFREWEAFVKAKDSDPPGPIDNSKVALTKS 779
Query: 261 -GKVPESKIGSMKRISSKAWNKFFFKYNGGPALT 293
G V + +IS + WN Y GGP +
Sbjct: 780 SGHVQLKQGADYGQISEETWNYLLNIYGGGPEIA 813
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 1 MKKKITSPFCFPGELNMQRRLSEPSQLD--LIYDLSAVLIHKGTAVNSGHYIALIKDENT 58
M KI FP E++++ LSE + +Y L VL+H G ++ GHY ALIK E
Sbjct: 433 MMVKINDRHEFPLEIDLEPYLSETADKSESHVYVLHGVLVHGGD-LHGGHYYALIKPEKD 491
Query: 59 GQWWEFDDEHVS----------NLGHHPFGEGSSSSGSKVVR 90
W++FDD+ V+ N G P G +G+ R
Sbjct: 492 SNWFKFDDDRVTRATIKEVLEDNYGGEPAGRAKGYNGNPFKR 533
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KIT +P LN++ +S+ + ++Y L AVL+H G + ++GHY +K N GQW++
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASN-GQWYQ 396
Query: 64 FDDE--HVSNL 72
+D H SN+
Sbjct: 397 MNDSLVHSSNV 407
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI+ +P N+ +S+P+ Y+L VL+H G + SGHY + K N G W +
Sbjct: 345 KISKQISYPESFNLGPYMSDPN-CSCWYELIGVLVHAGGSTRSGHYYSFCKSSN-GVWLK 402
Query: 64 FDDEHVSN 71
FDD+ VSN
Sbjct: 403 FDDDFVSN 410
>sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana
GN=UBP3 PE=1 SV=1
Length = 371
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 KKITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWW 62
KK++ FP EL + + EP D+ Y L AV++H G+ N GHY++L+K N W
Sbjct: 272 KKLSYRVVFPLELKLSNTV-EPYA-DVEYSLFAVVVHVGSGPNHGHYVSLVKSHN--HWL 327
Query: 63 EFDDEHV 69
FDDE+V
Sbjct: 328 FFDDENV 334
>sp|C9JJH3|U17LA_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 10 OS=Homo
sapiens GN=USP17L10 PE=3 SV=1
Length = 530
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
KI +P L+MQ +S+ + L+Y L AVL+H G + ++GHY + +K + GQW++
Sbjct: 290 KIAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYSSYVKAQE-GQWYK 348
Query: 64 FDDEHVS 70
DD V+
Sbjct: 349 MDDAEVT 355
>sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana
GN=UBP6 PE=1 SV=1
Length = 482
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 30 IYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
IYDL AVL HKG + +SGHY+A +K E +G+W ++DD++ S
Sbjct: 412 IYDLVAVLTHKGRSADSGHYVAWVKQE-SGKWIQYDDDNPS 451
>sp|Q6R6M4|U17L2_HUMAN Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17L2
PE=1 SV=2
Length = 530
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + + GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQE-GQWYKMDDAKVT 355
>sp|A6NCW0|U17L3_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 3 OS=Homo
sapiens GN=USP17L3 PE=3 SV=1
Length = 530
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 11 FPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWEFDDEHVS 70
+P L+MQ +S+ + L+Y L AVL+H G + + GHY + +K + GQW++ DD V+
Sbjct: 297 YPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQE-GQWYKMDDAEVT 355
>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
PE=1 SV=1
Length = 526
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 4 KITSPFCFPGELNMQRRLSEPSQLDLIYDLSAVLIHKGTAVNSGHYIALIKDENTGQWWE 63
K+ +P L+++ LSEP+ L Y L AVL+H G +SGHY +K G+W++
Sbjct: 263 KLDRKVSYPEFLDLKPYLSEPTGGPLPYALYAVLVHDGATSHSGHYFCCVK-AGHGKWYK 321
Query: 64 FDDEHVS 70
DD V+
Sbjct: 322 MDDTKVT 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 308,885,768
Number of Sequences: 539616
Number of extensions: 13960537
Number of successful extensions: 30536
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 30153
Number of HSP's gapped (non-prelim): 335
length of query: 773
length of database: 191,569,459
effective HSP length: 125
effective length of query: 648
effective length of database: 124,117,459
effective search space: 80428113432
effective search space used: 80428113432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)