BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004119
(773 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase OS=Lupinus luteus PE=2 SV=2
Length = 794
Score = 1254 bits (3245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/797 (76%), Positives = 684/797 (85%), Gaps = 37/797 (4%)
Query: 5 SKGDKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTI- 63
+ DK + LELFLKIGLD+RTAKNT+ANNKVT NLT+VI++A VTDGC R +GNLLYT+
Sbjct: 7 TSSDKEKSLELFLKIGLDERTAKNTVANNKVTTNLTSVINDAGVTDGCSRTVGNLLYTVA 66
Query: 64 -----------------------KTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVS 100
KT AQL+AA SF ++TGSEN ++++FEEACGVGVEVS
Sbjct: 67 TKYPANALPHRPTLLQYIVNSKVKTTAQLDAALSFLSATGSENLDLNKFEEACGVGVEVS 126
Query: 101 SEDIELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLG 160
+EDI+ V+EV EENK TILELRYR NVG+L HVRKRLPWAD K+VKQL+DA++YE+LG
Sbjct: 127 TEDIKHAVDEVVEENKATILELRYRVNVGELLGHVRKRLPWADAKVVKQLVDAKLYEILG 186
Query: 161 ERTAAD---IEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENY 217
+RTAAD +K +K K E K P +K EEDL P FP PE+N+
Sbjct: 187 DRTAADNEKPKKKKEKPAKVEDKAAPVATSEKPL---------EEDLNPYLIFPNPEDNF 237
Query: 218 KVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGL 277
KVHTE+PFSDG++L CCNTK +L+KHL+ TGG VLTRFPPEPNGYLHIGHAKAMFVDFGL
Sbjct: 238 KVHTEVPFSDGNILRCCNTKALLEKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFVDFGL 297
Query: 278 AKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELI 337
AK+R G CYLR+DDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTS+YFQELYE AVELI
Sbjct: 298 AKDRNGGCYLRFDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSNYFQELYEFAVELI 357
Query: 338 RRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDM 397
RRGHAYVDHQT +EIKEYREKK+NSPWRDRPI+ESLKLFEDMR G IEEGKATLRMKQDM
Sbjct: 358 RRGHAYVDHQTADEIKEYREKKLNSPWRDRPISESLKLFEDMRRGFIEEGKATLRMKQDM 417
Query: 398 QNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRA 457
Q+DN+NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIEN+THSLCTLEFETRRA
Sbjct: 418 QSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENVTHSLCTLEFETRRA 477
Query: 458 SYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRR 517
SY+WLLHALG+YQPYVWEYSRLNVSNTVMSKRKLN LVT K+VDGWDDP LMTLAGLRRR
Sbjct: 478 SYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRR 537
Query: 518 GVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES 576
G+T T+INAFV+G+GI+RSD +LI ++RLEYH+REELNKTAPR MVVL+PLKVVITN+E+
Sbjct: 538 GMTPTAINAFVRGMGITRSDGTLISVERLEYHVREELNKTAPRAMVVLHPLKVVITNLEA 597
Query: 577 GTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYA 636
+ + +DAK+WPDAQADDASAFYK+PFSNVVYIE SDFRM+DSKDYYGLAPGKSV+LRYA
Sbjct: 598 KSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRYA 657
Query: 637 FPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLF 696
FPIKCTEVIL+DD ETIL IRAEYDPSKKTKPKGVLHWV++PSPGV+PL+VEVRLFE+LF
Sbjct: 658 FPIKCTEVILADDNETILEIRAEYDPSKKTKPKGVLHWVSQPSPGVDPLKVEVRLFERLF 717
Query: 697 NSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKL 756
SENPAELD+WL DLNP SKV I AY L A +GDRFQFERLGYFAVD+DSTPEKL
Sbjct: 718 LSENPAELDNWLGDLNPHSKVEISNAYGVSLLKDAKLGDRFQFERLGYFAVDQDSTPEKL 777
Query: 757 VFNRTVTLKDSFPKGGK 773
VFNRTVTLKDS+ KGGK
Sbjct: 778 VFNRTVTLKDSYGKGGK 794
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS
PE=2 SV=2
Length = 779
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/787 (47%), Positives = 504/787 (64%), Gaps = 50/787 (6%)
Query: 8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYTIKT-- 65
+K E++ LF +IGLD AK T N +++NL +I EA GCE+ +G LLYT+ T
Sbjct: 8 NKDELVTLFSQIGLDSSKAKETTNNATLSSNLQEIIKEAGAESGCEKSVGLLLYTLATKY 67
Query: 66 PAQ----------------------LEAAFSFFASTGSENFEVDEFEEACGVGVEVSSED 103
PA L+A + T +E V EFE++CGVGV ++ E
Sbjct: 68 PANAMKHRATLVDYIANKKSVNSINLQACLDYLRRTANEELNVAEFEQSCGVGVVITREQ 127
Query: 104 IELTVNEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERT 163
+ V++ +NK+ +LE RY+ N+G + ++ L WA+ K +K+ +DA + LLG +T
Sbjct: 128 VAQAVSDYINKNKSDLLEKRYQFNIGGILMEIKNSLKWANAKDIKEEVDAAILSLLGPKT 187
Query: 164 AADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEE-DLFPISNFPPPEENYKVHTE 222
AD K KP K DL PI P E E
Sbjct: 188 DAD----------KAPPAKPVKPTTPTAVATTTAATTTTGDLSPII----PAELKPAKEE 233
Query: 223 IPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERG 282
I F D S I NT ++L HL+ TGG ++TRFPPEPNGYLHIGHAKAM ++FG AK+ G
Sbjct: 234 IKFPDPSDNIQ-NTPKLLADHLKTTGGKIVTRFPPEPNGYLHIGHAKAMHLNFGYAKKNG 292
Query: 283 GYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHA 342
G CYLR+DDTNPE E +EYID I + V+W+G EP +ITY+S F LYE+A ELIRRG+A
Sbjct: 293 GKCYLRFDDTNPEKENQEYIDSIIDSVKWLGHEPCEITYSSSQFDTLYEMANELIRRGYA 352
Query: 343 YVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNF 402
YV HQT EI E REK +SP+R+R + E+LKLFEDMR G+ EEGKA LRMK DM++ N
Sbjct: 353 YVCHQTASEISEGREKMTDSPYRNRTVEENLKLFEDMRLGKFEEGKAILRMKGDMKHPNP 412
Query: 403 NMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWL 462
M DLIAYRIK+ HP +GDKWCIYPSYDY HC+VDSIENITHSLCTLEFE RR +Y WL
Sbjct: 413 CMRDLIAYRIKYHHHPMSGDKWCIYPSYDYTHCLVDSIENITHSLCTLEFEIRRLTYNWL 472
Query: 463 LHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTST 522
+ LGLY+P VWEY+RLN+++TV+SKRK+ LV NK V+GWDDP L TL RR+G T
Sbjct: 473 IDVLGLYRPVVWEYARLNLTHTVLSKRKIITLVQNKIVNGWDDPRLSTLNAFRRKGYTPE 532
Query: 523 SINAFVQGIGISRSD-SLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMH 581
+IN IG++R++ + I + LE R++L+ A R M V +P+KVVITN
Sbjct: 533 AINLLCDTIGVTRTNGTTISYELLELCCRQDLDGKATRAMAVFDPIKVVITNYPEDKSEE 592
Query: 582 LDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKC 641
++A P+ + +K+ FS +VYIE SDFRM+D+KD++GLAPGK +LL+YA+ IKC
Sbjct: 593 INA---PNIPSKPEKGTHKIDFSRIVYIERSDFRMEDNKDFFGLAPGKEILLKYAYNIKC 649
Query: 642 TEVIL-SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
+VI +D K T LH+ YD +K +HWV+ + G P++ EVRL+E LF
Sbjct: 650 EKVIQDADGKVTELHV--TYDKDNSSKKLKTIHWVSSVA-GTEPMKAEVRLYEHLFKDSE 706
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNR 760
DDWL+++NP+S +IP A+ + ++ ++ DR+QFER+GYF VDKD+T +K+VFNR
Sbjct: 707 IG--DDWLNNINPNSLRIIPNAFIDKTVLASKEYDRYQFERVGYFVVDKDTTSDKMVFNR 764
Query: 761 TVTLKDS 767
TV+LK++
Sbjct: 765 TVSLKEN 771
>sp|Q3MHH4|SYQ_BOVIN Glutamine--tRNA ligase OS=Bos taurus GN=QARS PE=2 SV=1
Length = 775
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 338/790 (42%), Positives = 458/790 (57%), Gaps = 62/790 (7%)
Query: 13 LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGC--ERRIGNLLY--------- 61
L LF +GL ++ A+ T+ N ++A L +A T G ++ G LLY
Sbjct: 7 LSLFTGLGLSEQKARETLKNTVLSAQLREAATQAQQTLGSSIDKATGTLLYGLASRLRDP 66
Query: 62 -------------TIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 108
I T QL AA + S + ++FE+ CGVGV V+ E IE V
Sbjct: 67 RRLSFLVSYITSRKIHTETQLSAALEYVRSHPLDPINTEDFEQECGVGVVVTPEQIEEAV 126
Query: 109 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 168
++ +L RY ++G L R L WAD K++K +D ++ LLG +T D+E
Sbjct: 127 EAAINRHRAKLLVERYHFSMGLLMGEARAALKWADGKMIKHEVDMQVLHLLGPKTETDLE 186
Query: 169 KLSKKKEKKEKKEKPEKDEDKKFANDAPV-----QLPEEDLFPISNFPPPEENYKVHTEI 223
K K K K + E+ ++ K + V L E+ F P ENYK
Sbjct: 187 K--KPKVAKARPEETDQRTAKDVVENGEVVVQTLSLMEQLRGEALKFHKPGENYK----- 239
Query: 224 PFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGG 283
+ G V +T ++L +HL++TGG V TRFPPEPNG LHIGHAKA+ +FG AK G
Sbjct: 240 --TPGYV-TTPHTMDLLKQHLDITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNG 296
Query: 284 YCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAY 343
C+LR+DDTNPE E+ ++ I ++V W+G+ P+K+TY SDYF +LY AVELIRR AY
Sbjct: 297 ICFLRFDDTNPEKEEAKFFTAIYDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRDQAY 356
Query: 344 VDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFN 403
V HQ EE+K + + SPWRDRPI ESL LFE MR G+ EG+ATLRMK M++
Sbjct: 357 VCHQRGEELKGH--NPLPSPWRDRPIEESLLLFEAMRKGKFAEGEATLRMKLVMEDGKM- 413
Query: 404 MYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLL 463
D +AYR+K+TPH GD WCIYP+YDY HC+ DSIE+ITHSLCT EF+ RR+SYFWL
Sbjct: 414 --DPVAYRVKYTPHHRTGDTWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLC 471
Query: 464 HALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTS 523
+AL +Y P WEY RLN+ V+SKRK+ LV V WDDP L TL LRRRG +
Sbjct: 472 NALDVYCPVQWEYGRLNLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGFPPEA 531
Query: 524 INAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLD 583
IN F +G++ + + + LE +R+ LN TAPR M VL PL+VVITN + + +
Sbjct: 532 INNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLEPLQVVITNFPATKALDIQ 591
Query: 584 AKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY-AFPIKCT 642
+P AD+ F++VPF + V+IE DF+ + Y LA G+ V LR+ + I+
Sbjct: 592 VPNFP---ADETKGFHQVPFGSTVFIERMDFKEEPEPGYKRLAWGQPVGLRHTGYVIELQ 648
Query: 643 EVIL--SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLF---N 697
V+ S E++ D + KPK +HWV++ PL E+RL+E+LF N
Sbjct: 649 HVVKGPSGCVESLKVTCRRADAGE--KPKAFIHWVSQ------PLTCEIRLYERLFQHKN 700
Query: 698 SENPAEL-DDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKL 756
E+PAE+ +LSDLNP S V+ A + S+ A D+FQFERLGYF+VD DS +L
Sbjct: 701 PEDPAEVPGGFLSDLNPASLQVVEAALVDCSVALAKPFDKFQFERLGYFSVDPDSNQGQL 760
Query: 757 VFNRTVTLKD 766
VFNRTVTLK+
Sbjct: 761 VFNRTVTLKE 770
>sp|Q9Y105|SYQ_DROME Probable glutamine--tRNA ligase OS=Drosophila melanogaster
GN=Aats-gln PE=1 SV=1
Length = 778
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 328/797 (41%), Positives = 472/797 (59%), Gaps = 69/797 (8%)
Query: 11 EILELFLKIGLDDRTAKNTIANNKVTANLT---AVIHEAAVTDGCERRIGNLLYTIKT-- 65
+++ F +G+ ++ AK T+ N VT NL A A ++DG G L+Y + T
Sbjct: 5 DLIAKFQALGMSEQKAKETLKNANVTKNLQLSLAAAGSATLSDGT----GMLIYHMATKL 60
Query: 66 ----------------------PAQLEAAFSFFASTGSE---NFEVDEFEEACGVGVEVS 100
+++AA + G N ++ E+ CGVGV V+
Sbjct: 61 KPQTADHLPLLVRYIVEHKLDNTQRVDAALEYLLKCGQSLNANIDLQALEKECGVGVVVT 120
Query: 101 SEDIELTVNEVFEEN-KNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELL 159
E IE TV + + K +LE RY N + VR L WAD K VK ID +++LL
Sbjct: 121 PEQIERTVQAKIKASYKEALLEQRYHFNSFKILQDVRGELKWADAKSVKAAIDVEIFDLL 180
Query: 160 GERTAADIEKLSKKKEK----KEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEE 215
G +T AD++ +K +K K K E + + A+D + E + +F P E
Sbjct: 181 GPKTEADLKPQTKANDKPKAAKPKAEVTPAAQTAEAASDGATTISELMKTKV-HFHAPGE 239
Query: 216 NYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDF 275
N+K +DG V + +T+ +L +HL TGG V TRFPPEPNG LHIGHAKA+ ++F
Sbjct: 240 NFK-------ADGYV-VTEHTERLLKEHLARTGGKVHTRFPPEPNGILHIGHAKAININF 291
Query: 276 GLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVE 335
G A G CYLRYDDTNPE E++++ I+E+V+W+G++PFKITY+SD FQ+LYE AV
Sbjct: 292 GYAAAHDGVCYLRYDDTNPEKEEEKFFLAIKEMVEWLGYKPFKITYSSDNFQQLYEWAVV 351
Query: 336 LIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQ 395
LI +G AYV HQ EE+K + K SPWR+RPI ESL+LFEDM+ G+I+EG ATLRMK
Sbjct: 352 LINKGLAYVCHQKAEELKGFNPKP--SPWRERPIEESLRLFEDMKRGKIDEGAATLRMKV 409
Query: 396 DMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETR 455
++ D +AYRIKF H G WCIYP+YDY HC+ DS+E+ITHSLCT EF++R
Sbjct: 410 TLEEGKM---DPVAYRIKFISHHRTGSDWCIYPTYDYTHCLCDSLEDITHSLCTKEFQSR 466
Query: 456 RASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLR 515
R+SY+WL +ALG+Y P WEY RLN++ ++SKRK+ L+T + V WDDP L TL LR
Sbjct: 467 RSSYYWLCNALGIYCPVQWEYGRLNMNYALVSKRKIAKLITEQIVHDWDDPRLFTLTALR 526
Query: 516 RRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNME 575
RRG + +IN F +G++ + + LE +R+ LN TAPR +VVL PLKV I N
Sbjct: 527 RRGFPAEAINNFCAQMGVTGAQIAVDPAMLEAAVRDVLNVTAPRRLVVLEPLKVTIKNFP 586
Query: 576 SGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY 635
+ L+ PD + +K+ V+YIE DF+++ K Y LAP +SV LR+
Sbjct: 587 HAAPVQLEV---PDFPQNPQQGTHKITLDKVIYIEQGDFKLEPEKGYRRLAPKQSVGLRH 643
Query: 636 A-FPIKCTEVILSDDKETILHIRAEYDPSKKT-KPKGVLHWVAEPSPGVNPLRVEVRLFE 693
A I E++ ++ + P+++ KPK + WV++ P+++EVRL+E
Sbjct: 644 AGLVISVDEIVKDPATGQVVELICTSQPAEQAEKPKAFVQWVSQ------PIQLEVRLYE 697
Query: 694 KLFNSENPAELDD----WLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDK 749
+LF +NP + ++ +LSD++ S V+ A+A+ +L+ A V D+FQFER+G+F+VD
Sbjct: 698 QLFKHKNPEDPNEVPGGFLSDISEQSMSVVV-AFADRALNQAKVYDKFQFERIGFFSVDP 756
Query: 750 DSTPEKLVFNRTVTLKD 766
D++ LVFNRTV LK+
Sbjct: 757 DTSANHLVFNRTVGLKE 773
>sp|P47897|SYQ_HUMAN Glutamine--tRNA ligase OS=Homo sapiens GN=QARS PE=1 SV=1
Length = 775
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 340/789 (43%), Positives = 461/789 (58%), Gaps = 60/789 (7%)
Query: 13 LELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGC--ERRIGNLLY--------- 61
L LF +GL ++ A+ T+ N+ ++A L +A T G ++ G LLY
Sbjct: 7 LSLFTSLGLSEQKARETLKNSALSAQLREAATQAQQTLGSTIDKATGILLYGLASRLRDT 66
Query: 62 -------------TIKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTV 108
I T QL AA + S + + +FE CGVGV V+ E IE V
Sbjct: 67 RRLSFLVSYIASKKIHTEPQLSAALEYVRSHPLDPIDTVDFERECGVGVIVTPEQIEEAV 126
Query: 109 NEVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIE 168
++ +L RY N+G L R L WAD K++K +D ++ LLG + AD+E
Sbjct: 127 EAAINRHRPQLLVERYHFNMGLLMGEARAVLKWADGKMIKNEVDMQVLHLLGPKLEADLE 186
Query: 169 KLSK--KKEKKEKKEKPEKD--EDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIP 224
K K K +E + KD E+ + A D + L E+ F P ENYK
Sbjct: 187 KKFKVAKARLEETDRRTAKDVVENGETA-DQTLSLMEQLRGEALKFHKPGENYK------ 239
Query: 225 FSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGY 284
+ G V + +T +L +HLE+TGG V TRFPPEPNG LHIGHAKA+ +FG AK G
Sbjct: 240 -TPGYV-VTPHTMNLLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGI 297
Query: 285 CYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYV 344
C+LR+DDTNPE E+ ++ I ++V W+G+ P+K+TY SDYF +LY AVELIRRG AYV
Sbjct: 298 CFLRFDDTNPEKEEAKFFTAICDMVAWLGYTPYKVTYASDYFDQLYAWAVELIRRGLAYV 357
Query: 345 DHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNM 404
HQ EE+K + + SPWRDRP+ ESL LFE MR G+ EG+ATLRMK M++
Sbjct: 358 CHQRGEELKGH--NTLPSPWRDRPMEESLLLFEAMRKGKFSEGEATLRMKLVMEDGKM-- 413
Query: 405 YDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLH 464
D +AYR+K+TPH GDKWCIYP+YDY HC+ DSIE+ITHSLCT EF+ RR+SYFWL +
Sbjct: 414 -DPVAYRVKYTPHHRTGDKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFWLCN 472
Query: 465 ALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSI 524
AL +Y P WEY RLN+ V+SKRK+ LV V WDDP L TL LRRRG +I
Sbjct: 473 ALDVYCPVQWEYGRLNLHYAVVSKRKILQLVATGAVRDWDDPRLFTLTALRRRGFPPEAI 532
Query: 525 NAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDA 584
N F +G++ + + + LE +R+ LN TAPR M VL L+V+ITN + + +
Sbjct: 533 NNFCARVGVTVAQTTMEPHLLEACVRDVLNDTAPRAMAVLESLRVIITNFPAAKSLDIQV 592
Query: 585 KRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRY-AFPIKCTE 643
+P AD+ F++VPF+ +V+IE +DF+ + + LA G+ V LR+ + I+
Sbjct: 593 PNFP---ADETKGFHQVPFAPIVFIERTDFKEEPEPGFKRLAWGQPVGLRHTGYVIELQH 649
Query: 644 VIL--SDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLF---NS 698
V+ S E++ D + KPK +HWV++ PL EVRL+E+LF N
Sbjct: 650 VVKGPSGCVESLEVTCRRADAGE--KPKAFIHWVSQ------PLMCEVRLYERLFQHKNP 701
Query: 699 ENPAEL-DDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLV 757
E+P E+ +LSDLN S V+ A + S+ A D+FQFERLGYF+VD DS KLV
Sbjct: 702 EDPTEVPGGFLSDLNLASLHVVDAALVDCSVALAKPFDKFQFERLGYFSVDPDSHQGKLV 761
Query: 758 FNRTVTLKD 766
FNRTVTLK+
Sbjct: 762 FNRTVTLKE 770
>sp|O62431|SYQ_CAEEL Probable glutamine--tRNA ligase OS=Caenorhabditis elegans GN=ers-1
PE=2 SV=1
Length = 786
Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust.
Identities = 336/809 (41%), Positives = 477/809 (58%), Gaps = 80/809 (9%)
Query: 14 ELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAVTDGCERRIGNLLYT----------- 62
E L +GL D T+ N K+T + +++ A+ + ++ G LLY
Sbjct: 5 EELLSLGLSDSKVAETLKNVKLTETIGSIVKLASESGEISKQKGTLLYQLATKLKPQVAA 64
Query: 63 -------------IKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIELTVN 109
IKT QL AA + S + +V +FE++CGVGV V+ +DIE V
Sbjct: 65 HTPLVVKYIMNDGIKTEPQLSAAIEYLLSHTVKGIQVPDFEKSCGVGVVVTIDDIEAAVT 124
Query: 110 EVFEENKNTILELRYRTNVGDLFAHVRKRLPWADPKIVKQLIDARMYELLGERTAADIEK 169
+V +++ I+ RY G L +R LPWAD I K+ +D R ELLG +TA D+
Sbjct: 125 KVIGQHREKIVAERYSFPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAEDLAP 184
Query: 170 LSKKKE-------------------KKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNF 210
K+K+ K +K+ PE+ FA+ A +E L ++F
Sbjct: 185 KKKEKKPEGPKPSKDAAAAATAPGTKNQKEASPEE-----FADGAETM--DELLRTRAHF 237
Query: 211 PPPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKA 270
EN+K DG V T E+L H+ GG V+TRFPPEPNG LHIGHAKA
Sbjct: 238 HKVGENFK-------QDGYV-TTPKTAELLKAHVAAVGGKVVTRFPPEPNGVLHIGHAKA 289
Query: 271 MFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELY 330
+ ++FG AK GG C LR+DDTNPE E++++ IE+IV W+G++P ++T++SD FQ+LY
Sbjct: 290 ININFGYAKAMGGVCNLRFDDTNPEKEEEKFFSAIEDIVHWLGYDPARVTHSSDNFQQLY 349
Query: 331 ELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKAT 390
AV+LI++G A+V HQ EE++ + + SPWR+RPI E+++LFEDM+NG+ +EG+AT
Sbjct: 350 LWAVKLIQKGLAFVCHQKVEEMRGFEVQL--SPWRERPIEENIQLFEDMKNGKFDEGEAT 407
Query: 391 LRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTL 450
LR+K ++ D +AYRIK+ PH G++WCIYP+YDY HC+ DSIENITHSLCT
Sbjct: 408 LRLKLTLEEGKV---DPVAYRIKYVPHHRTGNQWCIYPTYDYTHCLCDSIENITHSLCTK 464
Query: 451 EFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMT 510
EF++RR+SY+WL +AL +Y P WEY RLNV+ TV+SKRK+ L+T K V+ WDDP L T
Sbjct: 465 EFQSRRSSYYWLCNALDIYCPVQWEYGRLNVNYTVVSKRKILKLITTKTVNDWDDPRLFT 524
Query: 511 LAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVV 570
L LRRRG+ S +IN FV +G++ S +I L+ +R+ LN APRTM VL LK+
Sbjct: 525 LTALRRRGIPSEAINRFVAKLGLTMSQMVIDPHVLDATVRDYLNIHAPRTMAVLEGLKLT 584
Query: 571 ITNM-ESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDS-KDYYGLAPG 628
I N E +D +P D + V ++IE SD++ DS K + L P
Sbjct: 585 IENFSELNLPSSVDVPDFPSDPTDPRK--HSVSVDREIFIEKSDYKPDDSDKSFRRLTPK 642
Query: 629 KSVLLRYAFPIK--CTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLR 686
++V L++ + EV ++ T + ++AE S+K KPK +HWVA+ P+
Sbjct: 643 QAVGLKHIGLVLRFVKEVKDAEGHVTEVVVKAE-KLSEKDKPKAFIHWVAK------PVS 695
Query: 687 VEVRLFEKLFNSENP--AEL--DDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERL 742
EVRL+++LF S+NP A+L +LSD+NPDS V+ A + S+ + V DRFQFER+
Sbjct: 696 CEVRLYDRLFKSKNPEDAQLVPGGFLSDINPDSLTVVYNALIDQSIAKSKVYDRFQFERI 755
Query: 743 GYFAVDKDSTPEKLVFNRTVTLKDSFPKG 771
G+F VD+DST LVFNRTV LKD G
Sbjct: 756 GFFCVDRDSTSSTLVFNRTVMLKDGGASG 784
>sp|Q9Y7Y8|SYQ_SCHPO Probable glutamine--tRNA ligase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qrs1 PE=3 SV=1
Length = 811
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 332/830 (40%), Positives = 469/830 (56%), Gaps = 92/830 (11%)
Query: 8 DKSEILELFLKIGLDDRTAKNTIANNKVTANLTAVIHEAAV-TDGCERRIGNLLYT---- 62
D E+ F KIGL++ T K+T+ N K++++L VI E V + GC+R IGNLL+T
Sbjct: 4 DYEELRAKFTKIGLNETTVKDTLKNKKLSSSLNKVIEETNVGSSGCDRTIGNLLFTLANA 63
Query: 63 ------------------------IKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVE 98
+KT Q+ AA ++ + + EF++ GVGV
Sbjct: 64 SLKQKDPKSNAHEAFIASKIVSGDLKTNLQVNAAITY--CKDKDTIDESEFDKETGVGVV 121
Query: 99 VSSEDIELTVNEVFEENKNTILELRYRT---NVGDLFAHVRKRLPWADPKIVKQLIDARM 155
++ E IE V + ENK+ ILE RY+ + L H L WA VKQ +D +
Sbjct: 122 LTPEQIEQLVGDYVAENKSKILEQRYQLLNPSASALRQHA--LLKWAPQLEVKQTLDRKF 179
Query: 156 YELLGERTAAD----IEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFP 211
ELLG +T D +K +K K K+K K +++K ++ Q + ++F
Sbjct: 180 LELLGPKTEQDAAAGKKKGAKAKNSKQKTVDSGKAKEQKIVSE---QSKKYNMF------ 230
Query: 212 PPEENYKVHTEIPFSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAM 271
EE + P + ++ E + +HL+ TGG V+TRFPPEPNGYLHIGH+KA+
Sbjct: 231 --EEGFLAKLHKPGGNTQLI-----PERMKEHLQATGGGVVTRFPPEPNGYLHIGHSKAI 283
Query: 272 FVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYE 331
V+FG A+ G CYLR+DDTNPEAE++ Y + I+++V W+G++P+KITY+SDYF +LYE
Sbjct: 284 AVNFGFARYHNGVCYLRFDDTNPEAEEERYFESIKDLVAWLGFQPYKITYSSDYFDKLYE 343
Query: 332 LAVELIRRGHAYVDHQTPEEIKEYREKKMNSP-----WRDRPIAESLKLFEDMRNGRIEE 386
LA ELI+R AYV H T EIK+ R + P RDRPI ESL F +MR+G+ +
Sbjct: 344 LAEELIKRDKAYVCHCTDAEIKKARGGEERGPRYACVHRDRPIEESLLEFRNMRDGKYQP 403
Query: 387 GKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHS 446
+A LRMKQD+ + N M+DLIAYR+ +PHP GDKW IYP+YD+ HC+VDS ENI+HS
Sbjct: 404 KEAILRMKQDLSDGNPQMWDLIAYRVLNSPHPRTGDKWKIYPTYDFTHCLVDSFENISHS 463
Query: 447 LCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDP 506
LCT EF R SY WL +AL +Y P EY RLNV T+MSKRK+ LV YV GW+DP
Sbjct: 464 LCTTEFILSRVSYEWLCNALEVYCPAQREYGRLNVVGTLMSKRKIMKLVKEGYVHGWNDP 523
Query: 507 CLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNP 566
L TL LRRRGV +I FV +G++ + S I + R E +R+ L + PR M + +P
Sbjct: 524 RLYTLVALRRRGVPPGAILEFVSEVGVTTAVSNIEVARFENCVRKFLENSVPRLMFLPDP 583
Query: 567 LKVVITNMESGTIMHLDAKRWP-DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGL 625
+KV + N++ ++ P D SAF + +YI+ SDFR + S D++ L
Sbjct: 584 IKVTLENLDDSYREQIEIPFNPKDPSMGSRSAF----LTKHIYIDRSDFREEASSDFFRL 639
Query: 626 APGKSV-LLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNP 684
G+ V L R + P+ V+ +D+ E I I AEYD S KPK + WV+ +P
Sbjct: 640 TLGQPVGLFRASHPVVAKRVVKNDEGEPI-EIIAEYDASSSKKPKTFIQWVSRDKESNSP 698
Query: 685 LRV-EVRLFEKLFNSENPAEL--DDWLSDLNPDSKVVIPEAYAEPSLH------------ 729
+ + E RLF LF +NPA L + + LNP+S+VV+ + EP ++
Sbjct: 699 VLIAETRLFNNLFKCDNPAALKEQELAAQLNPESEVVLKNSIIEPGIYDLIKSAPWPKTD 758
Query: 730 -SAAVGD-------RFQFERLGYFAVDKDS-TPEKLVFNRTVTLKDSFPK 770
SA V RFQ R+GYF +D+D+ P LV NR V+L++ K
Sbjct: 759 SSAGVDKAENPESVRFQAMRVGYFCLDEDTKKPNHLVLNRIVSLREDSAK 808
>sp|P13188|SYQ_YEAST Glutamine--tRNA ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GLN4 PE=1 SV=2
Length = 809
Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust.
Identities = 318/827 (38%), Positives = 458/827 (55%), Gaps = 90/827 (10%)
Query: 11 EILELFLKIGLDDRTAKNTIANNKVTANLTAVIHE------------------AAVTDGC 52
E+ +LF ++G +D+ K + N KV+ +L +I E A+ G
Sbjct: 6 ELTQLFSQVGFEDKKVKEIVKNKKVSDSLYKLIKETPSDYQWNKSTRALVHNLASFVKGT 65
Query: 53 ERRIGNLLYT------IKTPAQLEAAFSFFASTGSENFEVDEFEEACGVGVEVSSEDIEL 106
+ L+ +KT Q++AAF + + G + ++ E GVG+E++ + +
Sbjct: 66 DLPKSELIVNGIINGDLKTSLQVDAAFKYVKANGEASTKMG-MNENSGVGIEITEDQVRN 124
Query: 107 TVNEVFEENKNTILELRYRTNVGDLFAHVR--KRLPWADPKIVKQLIDARMYELLGERTA 164
V + +ENK IL RY+ V +FA V+ K L WADP+ K +ID + +LLG +
Sbjct: 125 YVMQYIQENKERILTERYKL-VPGIFADVKNLKELKWADPRSFKPIIDQEVLKLLGPKDE 183
Query: 165 ADIEKLSKKKEKKEKKEKPEKDEDKKFANDAPVQLPEEDLFPISNFPPPEENYKVHTEIP 224
D+ K K +K+K +K D A+ P + + F + + EN + + E+
Sbjct: 184 RDLIKKKTKNNEKKKTNSAKKSSDNS-ASSGPKRTMFNEGF-LGDLHKVGENPQAYPEL- 240
Query: 225 FSDGSVLICCNTKEVLDKHLEVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGY 284
+ +HLEVTGG V TRFPPEPNGYLHIGH+KA+ V+FG AK G
Sbjct: 241 ---------------MKEHLEVTGGKVRTRFPPEPNGYLHIGHSKAIMVNFGYAKYHNGT 285
Query: 285 CYLRYDDTNPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYV 344
CYLR+DDTNPE E EY + I+ +V W+G++P+KITY+SDYF ELY LA LI+ G AYV
Sbjct: 286 CYLRFDDTNPEKEAPEYFESIKRMVSWLGFKPWKITYSSDYFDELYRLAEVLIKNGKAYV 345
Query: 345 DHQTPEEIKEYRE-KKMNSPW--------RDRPIAESLKLFEDMRNGRIEEGKATLRMKQ 395
H T EEIK R K+ +P RD+ I ++L+ F DMR+G+ + G+A LRMKQ
Sbjct: 346 CHCTAEEIKRGRGIKEDGTPGGERYACKHRDQSIEQNLQEFRDMRDGKYKPGEAILRMKQ 405
Query: 396 DMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETR 455
D+ + + M+DLIAYR+ PHP G KW IYP+YD+ HC+VDS+ENITHSLCT EF
Sbjct: 406 DLNSPSPQMWDLIAYRVLNAPHPRTGTKWRIYPTYDFTHCLVDSMENITHSLCTTEFYLS 465
Query: 456 RASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLR 515
R SY WL + +++P EY RLN++ TV+SKRK+ LV K+V GWDDP L TL +R
Sbjct: 466 RESYEWLCDQVHVFRPAQREYGRLNITGTVLSKRKIAQLVDEKFVRGWDDPRLFTLEAIR 525
Query: 516 RRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNME 575
RRGV +I +F+ +G++ S + I++ R E +R+ L T PR M VL+P++VV+ N+
Sbjct: 526 RRGVPPGAILSFINTLGVTTSTTNIQVVRFESAVRKYLEDTTPRLMFVLDPVEVVVDNLS 585
Query: 576 SGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMK-DSKDYYGLAPGKSVLLR 634
+ + P VPF+N YIE SDF D K+++ L P + V L
Sbjct: 586 DD---YEELATIPYRPGTPEFGERTVPFTNKFYIERSDFSENVDDKEFFRLTPNQPVGLI 642
Query: 635 YAFPIKCTEVILSDDKETILHIRAEYD-----PSKKTKPKGVLHWVAEPSPGVNPLRV-E 688
+ + D+ I+ I YD SK KPK + WV S +PLRV E
Sbjct: 643 KVSHTVSFKSLEKDEAGKIIRIHVNYDNKVEEGSKPKKPKTYIQWVPISSKYNSPLRVTE 702
Query: 689 VRLFEKLFNSENPAEL-DDWLSDLNPDSKVVIPEAYAEPSL-----HSAAVGD------- 735
R++ +LF SENP+ + +L D+NP+S+VV E+ E + +S V D
Sbjct: 703 TRVYNQLFKSENPSSHPEGFLKDINPESEVVYKESVMEHNFGDVVKNSPWVVDSVKNSEF 762
Query: 736 ------------RFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPK 770
RFQ R+GYF +DK+ST K++ NR V+LKD+ K
Sbjct: 763 YVEEDKDSKEVCRFQAMRVGYFTLDKESTTSKVILNRIVSLKDATSK 809
>sp|B5YQM4|SYQ_ECO5E Glutamine--tRNA ligase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ SDFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRSDFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q8X9H8|SYQ_ECO57 Glutamine--tRNA ligase OS=Escherichia coli O157:H7 GN=glnS PE=3
SV=3
Length = 554
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ SDFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRSDFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q1REN7|SYQ_ECOUT Glutamine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q8FJW4|SYQ_ECOL6 Glutamine--tRNA ligase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=glnS PE=3 SV=3
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q0TK03|SYQ_ECOL5 Glutamine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|A1A8U7|SYQ_ECOK1 Glutamine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=glnS
PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7MPI5|SYQ_ECO81 Glutamine--tRNA ligase OS=Escherichia coli O81 (strain ED1a)
GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7MFU7|SYQ_ECO45 Glutamine--tRNA ligase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7UKW1|SYQ_ECO27 Glutamine--tRNA ligase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q83LY4|SYQ_SHIFL Glutamine--tRNA ligase OS=Shigella flexneri GN=glnS PE=3 SV=1
Length = 554
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGNVL--TRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G ++ TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q0T6S8|SYQ_SHIF8 Glutamine--tRNA ligase OS=Shigella flexneri serotype 5b (strain
8401) GN=glnS PE=3 SV=1
Length = 554
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGNVL--TRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G ++ TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHITVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|A7MT45|SYQ_VIBHB Glutamine--tRNA ligase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=glnS PE=3 SV=1
Length = 556
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/549 (47%), Positives = 356/549 (64%), Gaps = 24/549 (4%)
Query: 237 KEVLDKHL-EVTGGNVLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPE 295
++++DK L + +V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNPE
Sbjct: 13 RQIIDKDLADGKHTSVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPE 72
Query: 296 AEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKE 354
E EY++ I++ V W+G+E ++ Y+S+YF +LYE A+ELI +G AYVD +PE+I+E
Sbjct: 73 KEDIEYVESIKKDVNWLGFEWDGEVCYSSNYFDKLYEYAIELINKGLAYVDELSPEQIRE 132
Query: 355 YREKKMN----SPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAY 410
YR SP+RDRPI E+L LFE MR G EEGKA LR K DM + M D + Y
Sbjct: 133 YRGTLTAPGKPSPYRDRPIEENLALFEKMRAGEFEEGKACLRAKIDMGSSFMVMRDPVIY 192
Query: 411 RIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-Y 469
R++F H GDKWCIYP YD+ HCI D++E ITHS+CTLEF R Y W+L + +
Sbjct: 193 RVRFATHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFMDNRRLYDWVLDNITIDC 252
Query: 470 QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQ 529
+P+ +E+SRLN+ TVMSKRKLN LVT K VDGWDDP + T++GLRRRG TS SI F +
Sbjct: 253 RPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVDGWDDPRMPTVSGLRRRGFTSASIREFCK 312
Query: 530 GIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPD 589
IG+++ +++I LE IR++LN+ APR M VL+P+K+VI N E G + L P+
Sbjct: 313 RIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPVKIVIENFEEGAVETLTVANHPN 372
Query: 590 AQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDD 649
+VPF+ V+IE DFR + +K Y L GK V LR A+ IK E I D
Sbjct: 373 KP---EMGEREVPFTREVWIEREDFREEANKKYKRLVLGKEVRLRGAYVIK-AERIEKDA 428
Query: 650 KETILHIRAEYD-------PSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPA 702
+ I I YD P+ K KGV+HWV+ L E+RL+++LF NPA
Sbjct: 429 EGNITTIFCTYDAETLGKNPADGRKVKGVIHWVSADK----ALPAEIRLYDRLFTVPNPA 484
Query: 703 ELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRT 761
DD+ + +NP+S +VI + EPSL ++ +QFER+GYF D KDS+ + LVFNRT
Sbjct: 485 AADDFAATINPES-LVILNGFVEPSLAASEAEKGYQFERMGYFCADSKDSSADNLVFNRT 543
Query: 762 VTLKDSFPK 770
V L+D++ K
Sbjct: 544 VGLRDTWAK 552
>sp|Q8ZQX5|SYQ_SALTY Glutamine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=glnS PE=3 SV=3
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B5BCC3|SYQ_SALPK Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain AKU_12601)
GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|C0PWA7|SYQ_SALPC Glutamine--tRNA ligase OS=Salmonella paratyphi C (strain RKS4594)
GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|Q5PCH8|SYQ_SALPA Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B4TB84|SYQ_SALHS Glutamine--tRNA ligase OS=Salmonella heidelberg (strain SL476)
GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B5R651|SYQ_SALG2 Glutamine--tRNA ligase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B5QWD0|SYQ_SALEP Glutamine--tRNA ligase OS=Salmonella enteritidis PT4 (strain
P125109) GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B5FNC1|SYQ_SALDC Glutamine--tRNA ligase OS=Salmonella dublin (strain CT_02021853)
GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B5EZC3|SYQ_SALA4 Glutamine--tRNA ligase OS=Salmonella agona (strain SL483) GN=glnS
PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|A9MUG5|SYQ_SALPB Glutamine--tRNA ligase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 361/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKLEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|Q324M4|SYQ_SHIBS Glutamine--tRNA ligase OS=Shigella boydii serotype 4 (strain Sb227)
GN=glnS PE=3 SV=1
Length = 554
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 364/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG++R D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTRQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS+ ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSSEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q32IQ0|SYQ_SHIDS Glutamine--tRNA ligase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=glnS PE=3 SV=1
Length = 554
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/538 (48%), Positives = 353/538 (65%), Gaps = 26/538 (4%)
Query: 251 VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNPEAEKKEYIDHIEEIVQ 310
V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP E EY+D I+ V+
Sbjct: 28 VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVDSIKNDVE 87
Query: 311 WMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPWR 365
W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+EYR + NSP+R
Sbjct: 88 WLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTKPGKNSPYR 147
Query: 366 DRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWC 425
DR + E+L LFE MR G EEGKA LR K DM + M D + YRIKF H G+KWC
Sbjct: 148 DRSVEENLPLFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWC 207
Query: 426 IYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSNT 484
IYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + + P +E+SRLN+ T
Sbjct: 208 IYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYT 267
Query: 485 VMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDR 544
VMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F + IG+++ D+ I +
Sbjct: 268 VMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMAS 327
Query: 545 LEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRWPDAQADDASAFYKVPF 603
LE IRE+LN+ APR M V++P+K+VI N + G ++ + P+ +VPF
Sbjct: 328 LESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM-----PNHPNKPEMGSRQVPF 382
Query: 604 SNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY--- 660
S ++I+ +DFR + +K Y L GK V LR A+ IK E + D + I I Y
Sbjct: 383 SGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDAD 441
Query: 661 ----DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSK 716
DP+ K KGV+HWV+ + L VE+RL+++LF+ NP DD+LS +NP+S
Sbjct: 442 TLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPNPGAADDFLSVINPES- 496
Query: 717 VVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSFPKGGK 773
+VI + +AEPSL A G FQFER GYF +D + ST EK VFNRTV L+D++ K G+
Sbjct: 497 LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE 554
>sp|Q57RP8|SYQ_SALCH Glutamine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=glnS PE=3 SV=1
Length = 555
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 360/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKD-STPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D +T +KLVFNR
Sbjct: 484 GTAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSCYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B4TQ00|SYQ_SALSV Glutamine--tRNA ligase OS=Salmonella schwarzengrund (strain
CVM19633) GN=glnS PE=3 SV=1
Length = 555
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 360/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGTKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI + Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B7LKT3|SYQ_ESCF3 Glutamine--tRNA ligase OS=Escherichia fergusonii (strain ATCC 35469
/ DSM 13698 / CDC 0568-73) GN=glnS PE=3 SV=1
Length = 554
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B1LLC4|SYQ_ECOSM Glutamine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7N9S6|SYQ_ECOLU Glutamine--tRNA ligase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B4SYN9|SYQ_SALNS Glutamine--tRNA ligase OS=Salmonella newport (strain SL254) GN=glnS
PE=3 SV=1
Length = 555
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 360/553 (65%), Gaps = 26/553 (4%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY+D I+ V+W+G+ I Y+SDYF +L+ AVELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWP 588
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N G + P
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHP 371
Query: 589 DAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSD 648
+ + +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E + D
Sbjct: 372 NKPEMGSR---EVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIK-AERVEKD 427
Query: 649 DKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENP 701
+ I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ NP
Sbjct: 428 AEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPNP 483
Query: 702 AELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNR 760
+D+LS +NP+S +VI Y EPSL +A G FQFER GYF +D + +T +KLVFNR
Sbjct: 484 GAAEDFLSVINPES-LVIKRGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNR 542
Query: 761 TVTLKDSFPKGGK 773
TV L+D++ K G+
Sbjct: 543 TVGLRDTWAKAGE 555
>sp|B2TU51|SYQ_SHIB3 Glutamine--tRNA ligase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=glnS PE=3 SV=1
Length = 554
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIS 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7NMN1|SYQ_ECO7I Glutamine--tRNA ligase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=glnS PE=3 SV=1
Length = 554
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L +E+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPIEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|Q3Z4C0|SYQ_SHISS Glutamine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=glnS
PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B6HYN9|SYQ_ECOSE Glutamine--tRNA ligase OS=Escherichia coli (strain SE11) GN=glnS
PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|P00962|SYQ_ECOLI Glutamine--tRNA ligase OS=Escherichia coli (strain K12) GN=glnS
PE=1 SV=3
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B1IY48|SYQ_ECOLC Glutamine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|A7ZXU0|SYQ_ECOHS Glutamine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS)
GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B1X6L3|SYQ_ECODH Glutamine--tRNA ligase OS=Escherichia coli (strain K12 / DH10B)
GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|C4ZWF6|SYQ_ECOBW Glutamine--tRNA ligase OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7M5J8|SYQ_ECO8A Glutamine--tRNA ligase OS=Escherichia coli O8 (strain IAI1) GN=glnS
PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|B7L9L7|SYQ_ECO55 Glutamine--tRNA ligase OS=Escherichia coli (strain 55989 / EAEC)
GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
>sp|A7ZJ63|SYQ_ECO24 Glutamine--tRNA ligase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=glnS PE=3 SV=1
Length = 554
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 29/554 (5%)
Query: 237 KEVLDKHLEVTGGN--VLTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGYCYLRYDDTNP 294
++++D+ L +G + V TRFPPEPNGYLHIGHAK++ ++FG+A++ G C LR+DDTNP
Sbjct: 13 RQIIDEDL-ASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNP 71
Query: 295 EAEKKEYIDHIEEIVQWMGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 353
E EY++ I+ V+W+G+ + Y+SDYF +L+ A+ELI +G AYVD TPE+I+
Sbjct: 72 VKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIR 131
Query: 354 EYR----EKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIA 409
EYR + NSP+RDR + E+L LFE MR G EEGKA LR K DM + M D +
Sbjct: 132 EYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVL 191
Query: 410 YRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL- 468
YRIKF H G+KWCIYP YD+ HCI D++E ITHSLCTLEF+ R Y W+L + +
Sbjct: 192 YRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIP 251
Query: 469 YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFV 528
P +E+SRLN+ TVMSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI F
Sbjct: 252 VHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFC 311
Query: 529 QGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRW 587
+ IG+++ D+ I + LE IRE+LN+ APR M V++P+K+VI N + G ++ +
Sbjct: 312 KRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTM----- 366
Query: 588 PDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILS 647
P+ +VPFS ++I+ +DFR + +K Y L GK V LR A+ IK E +
Sbjct: 367 PNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEK 425
Query: 648 DDKETILHIRAEY-------DPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSEN 700
D + I I Y DP+ K KGV+HWV+ + L VE+RL+++LF+ N
Sbjct: 426 DAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVS----AAHALPVEIRLYDRLFSVPN 481
Query: 701 PAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFN 759
P DD+LS +NP+S +VI + +AEPSL A G FQFER GYF +D + ST EK VFN
Sbjct: 482 PGAADDFLSVINPES-LVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN 540
Query: 760 RTVTLKDSFPKGGK 773
RTV L+D++ K G+
Sbjct: 541 RTVGLRDTWAKVGE 554
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 308,690,060
Number of Sequences: 539616
Number of extensions: 14047971
Number of successful extensions: 62035
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 57314
Number of HSP's gapped (non-prelim): 2613
length of query: 773
length of database: 191,569,459
effective HSP length: 125
effective length of query: 648
effective length of database: 124,117,459
effective search space: 80428113432
effective search space used: 80428113432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)