Your job contains 1 sequence.
>004120
MATISHSSLAFTGASASDLFRSSKSHVNGMPLKALGRARFGSKSRGFAVSAKLRKVKKHD
YPWPKDPKDVDPNVKGGVLTHLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKMANDT
GLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGD
RAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADH
HGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIG
CANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPL
GGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVN
MKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSE
AAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKL
DMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSD
LEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEE
INKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSEL
KEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRSFA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004120
(773 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065654 - symbol:CAC3 "acetyl Co-enzyme a carb... 2288 2.6e-237 1
TIGR_CMR|CHY_1142 - symbol:CHY_1142 "acetyl-CoA carboxyla... 654 3.7e-64 1
TIGR_CMR|GSU_1402 - symbol:GSU_1402 "acetyl-CoA carboxyla... 638 1.8e-62 1
UNIPROTKB|Q9KPW8 - symbol:accA "Acetyl-coenzyme A carboxy... 597 4.0e-58 1
TIGR_CMR|VC_2244 - symbol:VC_2244 "acetyl-CoA carboxylase... 597 4.0e-58 1
TIGR_CMR|CPS_1571 - symbol:CPS_1571 "acetyl-CoA carboxyla... 596 5.1e-58 1
TIGR_CMR|BA_4845 - symbol:BA_4845 "acetyl-CoA carboxylase... 594 8.4e-58 1
UNIPROTKB|P0ABD5 - symbol:accA species:83333 "Escherichia... 577 5.3e-56 1
TIGR_CMR|CBU_1510 - symbol:CBU_1510 "acetyl-CoA carboxyla... 557 7.0e-54 1
TIGR_CMR|CJE_0495 - symbol:CJE_0495 "acetyl-CoA carboxyla... 548 6.3e-53 1
TIGR_CMR|SPO_3616 - symbol:SPO_3616 "acetyl-CoA carboxyla... 543 2.1e-52 1
UNIPROTKB|Q8IIG7 - symbol:PF11_0207 "Uncharacterized prot... 183 6.2e-10 2
DICTYBASE|DDB_G0271058 - symbol:vilC "villin-like protein... 141 1.8e-05 1
UNIPROTKB|I3LBD0 - symbol:RABGAP1 "Uncharacterized protei... 132 1.8e-05 1
CGD|CAL0006033 - symbol:orf19.6148 species:5476 "Candida ... 136 3.9e-05 1
UNIPROTKB|F1MDZ2 - symbol:LOC100852255 "Uncharacterized p... 135 4.3e-05 1
UNIPROTKB|B7Z2B4 - symbol:RABGAP1 "Rab GTPase-activating ... 132 4.9e-05 2
UNIPROTKB|F1RJU6 - symbol:NEFM "Neurofilament medium poly... 134 5.6e-05 1
UNIPROTKB|Q81NE9 - symbol:BAS3021 "LPXTG-motif cell wall ... 128 6.5e-05 1
TIGR_CMR|BA_3254 - symbol:BA_3254 "LPXTG-motif cell wall ... 128 6.5e-05 1
CGD|CAL0001468 - symbol:SYS3 species:5476 "Candida albica... 131 0.00011 1
UNIPROTKB|Q59UF5 - symbol:SYS3 "Potential GRIP domain Gol... 131 0.00011 1
POMBASE|SPAC4H3.14c - symbol:SPAC4H3.14c "sequence orphan... 125 0.00012 1
DICTYBASE|DDB_G0302588 - symbol:DDB_G0302588 "RanBP2-type... 137 0.00012 1
UNIPROTKB|E2QSV1 - symbol:NEFM "Uncharacterized protein" ... 129 0.00017 1
UNIPROTKB|F1P0K1 - symbol:RRBP1 "Uncharacterized protein"... 128 0.00021 1
MGI|MGI:97314 - symbol:Nefm "neurofilament, medium polype... 128 0.00022 1
WB|WBGene00010306 - symbol:F59A2.6 species:6239 "Caenorha... 128 0.00031 1
MGI|MGI:2385139 - symbol:Rabgap1 "RAB GTPase activating p... 135 0.00032 2
UNIPROTKB|F1N1F8 - symbol:CENPF "Uncharacterized protein"... 132 0.00035 1
UNIPROTKB|F1NI68 - symbol:GOLGA4 "Uncharacterized protein... 127 0.00038 2
UNIPROTKB|F1NMQ0 - symbol:GOLGA4 "Uncharacterized protein... 127 0.00038 2
SGD|S000002764 - symbol:SPC110 "Inner plaque spindle pole... 133 0.00039 2
UNIPROTKB|E1BUF3 - symbol:HMMR "Uncharacterized protein" ... 124 0.00045 1
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 128 0.00050 1
UNIPROTKB|P63405 - symbol:accD3 "Putative acetyl-coenzyme... 121 0.00061 1
POMBASE|SPAC140.02 - symbol:gar2 "nucleolar protein requi... 121 0.00062 1
UNIPROTKB|F8W7S5 - symbol:RRBP1 "Ribosome-binding protein... 123 0.00066 1
UNIPROTKB|Q9Y3P9 - symbol:RABGAP1 "Rab GTPase-activating ... 132 0.00067 2
UNIPROTKB|E7EMV2 - symbol:NEFM "Neurofilament medium poly... 122 0.00077 1
UNIPROTKB|F1N746 - symbol:F1N746 "Uncharacterized protein... 131 0.00083 2
POMBASE|SPAC29E6.03c - symbol:uso1 "ER to Golgi tethering... 122 0.00090 2
UNIPROTKB|E1BQR7 - symbol:ERC1 "Uncharacterized protein" ... 122 0.0010 1
>TAIR|locus:2065654 [details] [associations]
symbol:CAC3 "acetyl Co-enzyme a carboxylase
carboxyltransferase alpha subunit" species:3702 "Arabidopsis
thaliana" [GO:0003989 "acetyl-CoA carboxylase activity"
evidence=IEA;ISS;NAS] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA;ISS] [GO:0009317 "acetyl-CoA carboxylase complex"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=RCA]
[GO:0009536 "plastid" evidence=IDA] UniPathway:UPA00655
InterPro:IPR001095 InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069
PROSITE:PS50989 GO:GO:0005524 GO:GO:0009570 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0009941 GO:GO:0006633
GO:GO:0009706 GO:GO:0003989 GO:GO:2001295 EMBL:AF056969
EMBL:AF056970 EMBL:AK221200 IPI:IPI00540216 RefSeq:NP_565880.1
RefSeq:NP_850291.1 UniGene:At.22739 ProteinModelPortal:Q9LD43
SMR:Q9LD43 STRING:Q9LD43 PaxDb:Q9LD43 PRIDE:Q9LD43
EnsemblPlants:AT2G38040.1 EnsemblPlants:AT2G38040.2 GeneID:818382
KEGG:ath:AT2G38040 TAIR:At2g38040 eggNOG:COG0825
HOGENOM:HOG000273832 InParanoid:Q9LD43 KO:K01962 OMA:QQIKIAI
PhylomeDB:Q9LD43 ProtClustDB:PLN03229 Genevestigator:Q9LD43
GO:GO:0009317 PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513
Uniprot:Q9LD43
Length = 769
Score = 2288 (810.5 bits), Expect = 2.6e-237, P = 2.6e-237
Identities = 460/782 (58%), Positives = 577/782 (73%)
Query: 1 MATISHSSLAFTGAS---ASDLFRSSKSHVNGMPLKALGRARFGS-KSRGFAVSAKLRKV 56
MA+ISHSSLA GAS ASD RSS + VNG+PLK LGRA F + + + AV+++L+K
Sbjct: 1 MASISHSSLALGGASSASASDYLRSSSNGVNGVPLKTLGRAVFTTIRRKDLAVTSRLKKG 60
Query: 57 KKHDYPWPKDPKDVDPNVKGGVLTHLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKM 116
KK ++PWP +P DPNVKGGVL++L+ FKPL + KPVTLDFEKPLV L KKI+DVRKM
Sbjct: 61 KKFEHPWPANP---DPNVKGGVLSYLAEFKPLGDTQKPVTLDFEKPLVELEKKIVDVRKM 117
Query: 117 ANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVE 176
AN+TGLDF++QI++LENKY+QALKDLYTHLTPIQRVNIARHPNRPTFLDH+ NIT+KF+E
Sbjct: 118 ANETGLDFTEQIITLENKYRQALKDLYTHLTPIQRVNIARHPNRPTFLDHIHNITDKFME 177
Query: 177 LHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMY 236
LHGDRAGYDDPAIVTGIG++DG+ YMF+GHQKGRNTKENI RNFGMPTPHGYRKALRMMY
Sbjct: 178 LHGDRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMY 237
Query: 237 YADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPXXXXXXXXXXXXXX 296
YADHHGFPIVTFIDTPGAYADLKSEELGQGEAIA+NLRTMFGLKVP
Sbjct: 238 YADHHGFPIVTFIDTPGAYADLKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGGA 297
Query: 297 XXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXXXXXXITGSELCKLQIADGVI 356
CANK+LMLENAVFYVASPEACAAILW IT EL KL +ADG+I
Sbjct: 298 LAIGCANKMLMLENAVFYVASPEACAAILWKTSKAAPEAAEKLRITSKELVKLNVADGII 357
Query: 357 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPK 416
PEPLGGAHADPSWTSQQIKIAINE+M+E GKM +ELLKHR K+RKIG F EG PI+P
Sbjct: 358 PEPLGGAHADPSWTSQQIKIAINENMNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEPS 417
Query: 417 KKVNMKKKEGPIASKTSXXXXXXXXXXXXQQILKAKESSTK--PPDAALNVMIQKLKKEV 474
+K+NMKK+E + +QILKAKE+ST+ P LN MI+KLK E+
Sbjct: 418 RKINMKKREAVFSDSRKLQGEVDKLK---EQILKAKETSTEAEPSSEVLNEMIEKLKSEI 474
Query: 475 DHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYA 534
D E++EAA A+G++E+ +R EFSK +S + LM P+L++KI +LK EFN L APNY
Sbjct: 475 DDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEKIEKLKEEFNTRLTDAPNYE 534
Query: 535 SLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSG 594
SLK KL+ML++FS AK+ ++A LK+EINK+F+E + RP+I+EK+EAIKA++ SG
Sbjct: 535 SLKSKLNMLRDFSRAKAA----SEATSLKKEINKRFQEAVDRPEIREKVEAIKAEVASSG 590
Query: 595 ASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQ--TSFSNFRS 652
ASSF +L D LKEK+++TK E+E+E+ L+S+GL+++ VK K+ +EQ + N +
Sbjct: 591 ASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQE 650
Query: 653 KMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDV-KSKCKIQALEQQIKQRL 711
K+ +V+ + ++K M+ELLK+E AKA K P V ++ KI+ALEQQIKQ++
Sbjct: 651 KLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEAYQKIEALEQQIKQKI 710
Query: 712 SEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRS 771
+EA+N+S L+EK +EL E++ A + G E DD + + E+ N S
Sbjct: 711 AEALNTSGLQEKQDELEKELAAARELAAEESDGSVKEDDDDDEDSSESGKSEM---VNPS 767
Query: 772 FA 773
FA
Sbjct: 768 FA 769
>TIGR_CMR|CHY_1142 [details] [associations]
symbol:CHY_1142 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003989 "acetyl-CoA carboxylase
activity" evidence=ISS] [GO:0006633 "fatty acid biosynthetic
process" evidence=ISS] [GO:0009317 "acetyl-CoA carboxylase complex"
evidence=ISS] UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006633
GO:GO:0003989 GO:GO:2001295 eggNOG:COG0825 HOGENOM:HOG000273832
KO:K01962 GO:GO:0009317 PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513
OMA:QLTKDIY RefSeq:YP_359987.1 ProteinModelPortal:Q3ACZ7 SMR:Q3ACZ7
STRING:Q3ACZ7 GeneID:3727831 KEGG:chy:CHY_1142 PATRIC:21275424
BioCyc:CHYD246194:GJCN-1141-MONOMER Uniprot:Q3ACZ7
Length = 323
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 133/314 (42%), Positives = 188/314 (59%)
Query: 98 DFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARH 157
+FEKPLV L KI D++K A + +D S ++ L K QQ K++Y +LTP QRV +ARH
Sbjct: 7 EFEKPLVELENKISDLKKFAEEKNIDVSRELELLSAKAQQLAKEIYQNLTPWQRVLLARH 66
Query: 158 PNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQ 217
P RP D++ + + F+EL GDR DDPA++ GIG ++ +G+ KG++TKENI
Sbjct: 67 PERPNTRDYINYLCDDFIELKGDRRFGDDPAMIGGIGIIENIPVTIVGNLKGKDTKENIM 126
Query: 218 RNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMF 277
RNFGM P GYRKA+R+ A+ G P++TFIDTPGA+ + +EE GQ +AIA + T+
Sbjct: 127 RNFGMAHPEGYRKAIRLFKQAEKFGRPVLTFIDTPGAFCGIGAEERGQFQAIAEAIATLI 186
Query: 278 GLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXXX 337
LK P +KLLMLENAVF V +PE+ AAILW
Sbjct: 187 SLKTPVLAVITGEGGSGGALALAAGDKLLMLENAVFSVIAPESFAAILWKDSSRAQEASE 246
Query: 338 XXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHR 397
+T L + + DG+IPEPLGGAH +P+ T + +K + +++ L + +ELL+ R
Sbjct: 247 LLKLTSEHLLEFGLIDGIIPEPLGGAHRNPAETLKAVKEEVVKNLQILKETPVEELLRRR 306
Query: 398 NLKFRKIG-GFQEG 410
++R IG G EG
Sbjct: 307 YQRYRYIGSGIVEG 320
>TIGR_CMR|GSU_1402 [details] [associations]
symbol:GSU_1402 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003989 "acetyl-CoA carboxylase activity"
evidence=ISS] [GO:0006633 "fatty acid biosynthetic process"
evidence=ISS] [GO:0009317 "acetyl-CoA carboxylase complex"
evidence=ISS] UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 GO:GO:0006633 GO:GO:0003989 GO:GO:2001295
eggNOG:COG0825 HOGENOM:HOG000273832 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY
ProtClustDB:PRK05724 EMBL:AE017180 RefSeq:NP_952454.4
ProteinModelPortal:Q74DB5 SMR:Q74DB5 GeneID:2687857
GenomeReviews:AE017180_GR KEGG:gsu:GSU1402 PATRIC:22025647
BioCyc:GSUL243231:GH27-1377-MONOMER Uniprot:Q74DB5
Length = 313
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 127/314 (40%), Positives = 186/314 (59%)
Query: 97 LDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIAR 156
++FEKP+V L KK+ ++ ++A T + + ++ LE K + + ++++L+ Q V +AR
Sbjct: 1 MEFEKPVVELEKKVQELAELAG-TNAELAGEVTKLEKKVDRMREVIFSNLSRWQTVQVAR 59
Query: 157 HPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENI 216
H RP LD++ I F ELHGDR DD AIV G+ +DG + +GHQKGR+TKE +
Sbjct: 60 HIERPFTLDYLNLIFTDFTELHGDRLFGDDHAIVAGLAKLDGEPVVVIGHQKGRDTKEKV 119
Query: 217 QRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM 276
RNFGMP P GYRKALR+M A+ PI+TF+DTPGA+ + +EE GQ EAIA NLR M
Sbjct: 120 YRNFGMPNPEGYRKALRIMELAERFRLPIITFVDTPGAFPGIGAEERGQAEAIARNLREM 179
Query: 277 FGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXX 336
L VP +++LML+ +++ V SPE CAAILW
Sbjct: 180 AALTVPIIVVVTGEGGSGGALAIAVGDRVLMLQYSIYAVISPEGCAAILWSDGTKGEQAA 239
Query: 337 XXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKH 396
+T +L +L++ D ++PEPLGGAH D ++ + AI + EL + ++L++
Sbjct: 240 EALKLTAKDLKELEVIDEIVPEPLGGAHRDHEAMARTLHEAIARQLKELKAIPAEQLVEE 299
Query: 397 RNLKFRKIGGFQEG 410
R KFRK+ F EG
Sbjct: 300 RYQKFRKMSRFIEG 313
>UNIPROTKB|Q9KPW8 [details] [associations]
symbol:accA "Acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0003989 "acetyl-CoA carboxylase
activity" evidence=ISS] [GO:0006633 "fatty acid biosynthetic
process" evidence=ISS] [GO:0009317 "acetyl-CoA carboxylase complex"
evidence=ISS] UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006633
GO:GO:0003989 GO:GO:2001295 eggNOG:COG0825 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY
ProtClustDB:PRK05724 PIR:F82100 RefSeq:NP_231875.1
ProteinModelPortal:Q9KPW8 SMR:Q9KPW8 PRIDE:Q9KPW8 DNASU:2613166
GeneID:2613166 KEGG:vch:VC2244 PATRIC:20083531 Uniprot:Q9KPW8
Length = 319
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 126/312 (40%), Positives = 175/312 (56%)
Query: 97 LDFEKPLVGLSKKIM---DVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVN 153
LDFEKP+V L KI DV + + +D ++ LE K + K +++ L Q
Sbjct: 6 LDFEKPIVELETKIQALRDVSRHSTSASVDLDKELEQLEKKSLELKKKIFSDLGAWQVAQ 65
Query: 154 IARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTK 213
+ARHP RP LD++ +I +F EL GDRA DD AIV GI ++GR+ M +GHQKGR T+
Sbjct: 66 LARHPQRPYTLDYLKHIFTEFDELAGDRAYADDKAIVGGIARLEGRSVMVIGHQKGRETR 125
Query: 214 ENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNL 273
E ++RNFGMP P GYRKALR+M A+ PI+TFIDT GAY + +EE GQ EAIA NL
Sbjct: 126 EKVKRNFGMPKPEGYRKALRLMEMAERFNMPIITFIDTAGAYPGVGAEERGQSEAIAKNL 185
Query: 274 RTMFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXX 333
+ M GLKVP + + ML+ + + V SPE CA+ILW
Sbjct: 186 KVMSGLKVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRDSDKAP 245
Query: 334 XXXXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393
+ L +L++ D +I EPLGGAH D T++ +K + + +L +D + L
Sbjct: 246 QAAEAMGLIAPRLKELELIDEIIEEPLGGAHRDHKQTAENVKATLLRQLADLDALDHENL 305
Query: 394 LKHRNLKFRKIG 405
L+ R + G
Sbjct: 306 LERRYQRLMNYG 317
>TIGR_CMR|VC_2244 [details] [associations]
symbol:VC_2244 "acetyl-CoA carboxylase, carboxyl
transferase alpha subunit" species:686 "Vibrio cholerae O1 biovar
El Tor" [GO:0003989 "acetyl-CoA carboxylase activity" evidence=ISS]
[GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
[GO:0009317 "acetyl-CoA carboxylase complex" evidence=ISS]
UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006633
GO:GO:0003989 GO:GO:2001295 eggNOG:COG0825 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY
ProtClustDB:PRK05724 PIR:F82100 RefSeq:NP_231875.1
ProteinModelPortal:Q9KPW8 SMR:Q9KPW8 PRIDE:Q9KPW8 DNASU:2613166
GeneID:2613166 KEGG:vch:VC2244 PATRIC:20083531 Uniprot:Q9KPW8
Length = 319
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 126/312 (40%), Positives = 175/312 (56%)
Query: 97 LDFEKPLVGLSKKIM---DVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVN 153
LDFEKP+V L KI DV + + +D ++ LE K + K +++ L Q
Sbjct: 6 LDFEKPIVELETKIQALRDVSRHSTSASVDLDKELEQLEKKSLELKKKIFSDLGAWQVAQ 65
Query: 154 IARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTK 213
+ARHP RP LD++ +I +F EL GDRA DD AIV GI ++GR+ M +GHQKGR T+
Sbjct: 66 LARHPQRPYTLDYLKHIFTEFDELAGDRAYADDKAIVGGIARLEGRSVMVIGHQKGRETR 125
Query: 214 ENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNL 273
E ++RNFGMP P GYRKALR+M A+ PI+TFIDT GAY + +EE GQ EAIA NL
Sbjct: 126 EKVKRNFGMPKPEGYRKALRLMEMAERFNMPIITFIDTAGAYPGVGAEERGQSEAIAKNL 185
Query: 274 RTMFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXX 333
+ M GLKVP + + ML+ + + V SPE CA+ILW
Sbjct: 186 KVMSGLKVPVICNVVGEGGSGGALAIGVGDYVNMLQYSTYSVISPEGCASILWRDSDKAP 245
Query: 334 XXXXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393
+ L +L++ D +I EPLGGAH D T++ +K + + +L +D + L
Sbjct: 246 QAAEAMGLIAPRLKELELIDEIIEEPLGGAHRDHKQTAENVKATLLRQLADLDALDHENL 305
Query: 394 LKHRNLKFRKIG 405
L+ R + G
Sbjct: 306 LERRYQRLMNYG 317
>TIGR_CMR|CPS_1571 [details] [associations]
symbol:CPS_1571 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003989 "acetyl-CoA carboxylase activity"
evidence=ISS] [GO:0006633 "fatty acid biosynthetic process"
evidence=ISS] [GO:0009317 "acetyl-CoA carboxylase complex"
evidence=ISS] UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 GO:GO:0006633 GO:GO:0003989 GO:GO:2001295
eggNOG:COG0825 HOGENOM:HOG000273832 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY EMBL:CP000083
RefSeq:YP_268313.1 ProteinModelPortal:Q485F2 SMR:Q485F2
STRING:Q485F2 GeneID:3521705 GenomeReviews:CP000083_GR
KEGG:cps:CPS_1571 PATRIC:21466347
BioCyc:CPSY167879:GI48-1652-MONOMER Uniprot:Q485F2
Length = 318
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 124/311 (39%), Positives = 174/311 (55%)
Query: 97 LDFEKPLVGLSKKIMDVRKMAN--DTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNI 154
LDFE+P+ L KI +++ + N + LD DQI L K ++ K ++++L Q +
Sbjct: 6 LDFEQPIAELDAKIEELQLVNNGQELDLDIEDQISQLREKNKEQTKKIFSNLDAWQTARV 65
Query: 155 ARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKE 214
ARHP RP LD++ I +F EL GDRA +D AIV G +DG+ M +GHQKGR+T E
Sbjct: 66 ARHPQRPYSLDYIPRIFTEFDELAGDRAYANDNAIVGGTARLDGKPVMIIGHQKGRSTAE 125
Query: 215 NIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLR 274
++RNFGMP P GYRKALR+M A+ PI+TFIDTPGAY + +EE GQ EAIA NL+
Sbjct: 126 KVKRNFGMPRPEGYRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLK 185
Query: 275 TMFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXX 334
M L VP +++ ML+ A + V SPE CA+ILW
Sbjct: 186 VMARLSVPIICTVIGEGGSGGALAIGVGDRVNMLQYATYSVISPEGCASILWKTAEKAPT 245
Query: 335 XXXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELL 394
IT + +L + + ++ EPLGGAH D + +K AI + + EL + EL+
Sbjct: 246 AAAAMGITAQRIKELDLINSIVEEPLGGAHRDMDVMAAHLKQAIKKDLSELEGLSKDELI 305
Query: 395 KHRNLKFRKIG 405
+ R + G
Sbjct: 306 EQRYDRLMSFG 316
>TIGR_CMR|BA_4845 [details] [associations]
symbol:BA_4845 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:198094 "Bacillus anthracis str.
Ames" [GO:0003989 "acetyl-CoA carboxylase activity" evidence=ISS]
[GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
[GO:0009317 "acetyl-CoA carboxylase complex" evidence=ISS]
UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006633 GO:GO:0003989 GO:GO:2001295
eggNOG:COG0825 HOGENOM:HOG000273832 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 RefSeq:NP_847048.1
RefSeq:YP_021489.1 RefSeq:YP_030742.1 ProteinModelPortal:Q81KY9
SMR:Q81KY9 DNASU:1083998 EnsemblBacteria:EBBACT00000011024
EnsemblBacteria:EBBACT00000018728 EnsemblBacteria:EBBACT00000021359
GeneID:1083998 GeneID:2814345 GeneID:2851550 KEGG:ban:BA_4845
KEGG:bar:GBAA_4845 KEGG:bat:BAS4494 OMA:QLTKDIY
ProtClustDB:PRK05724 BioCyc:BANT260799:GJAJ-4552-MONOMER
BioCyc:BANT261594:GJ7F-4707-MONOMER Uniprot:Q81KY9
Length = 324
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 126/309 (40%), Positives = 177/309 (57%)
Query: 97 LDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIAR 156
L+FEKP+V L KI +++ ++ +DFS++I LE+K + +D+Y ++ RV IAR
Sbjct: 4 LEFEKPVVELRNKIRELKDYTKNSQMDFSEEIRILEDKLENLEEDIYGNMKVWDRVQIAR 63
Query: 157 HPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENI 216
H RPT LD++ ++ F E HGDR DD AIV GI G +GHQ+G++TKENI
Sbjct: 64 HAERPTTLDYIEHLFTDFFECHGDRLFGDDAAIVGGIAKYKGMPVTVIGHQRGKDTKENI 123
Query: 217 QRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM 276
+RNFGMP P GYRKALR+M A+ PI+ FIDT GAY +EE GQ EAIA NL M
Sbjct: 124 RRNFGMPHPEGYRKALRLMKQAEKFNRPIICFIDTKGAYPGKAAEERGQSEAIARNLFEM 183
Query: 277 FGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXX 336
GL VP + + MLEN+ + V +PE AAILW
Sbjct: 184 AGLTVPVICIVIGEGGSGGALGLGVGDYIHMLENSTYSVITPEGAAAILWKDAGKAKEAA 243
Query: 337 XXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKH 396
IT ++L +L + D +IPE GGAH + S+ I + + ++ ++L + EL++
Sbjct: 244 EAMRITAADLKELGVIDEIIPEAKGGAHRNVLKQSENIDLMLRKTFEQLNGISKDELIEK 303
Query: 397 RNLKFRKIG 405
R K+ KIG
Sbjct: 304 RYEKYMKIG 312
>UNIPROTKB|P0ABD5 [details] [associations]
symbol:accA species:83333 "Escherichia coli K-12"
[GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IGI;IMP]
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:2001295
"malonyl-CoA biosynthetic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0009329 "acetate CoA-transferase complex"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003989 "acetyl-CoA
carboxylase activity" evidence=IEA] UniPathway:UPA00655
HAMAP:MF_00823 InterPro:IPR001095 InterPro:IPR011763 Pfam:PF03255
PRINTS:PR01069 PROSITE:PS50989 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003989 GO:GO:2001295 GO:GO:0042759 eggNOG:COG0825
HOGENOM:HOG000273832 KO:K01962 PANTHER:PTHR22855:SF3
TIGRFAMs:TIGR00513 OMA:QLTKDIY ProtClustDB:PRK05724 EMBL:M96394
EMBL:D49445 EMBL:U70214 EMBL:D87518 EMBL:M19334 PIR:A43452
RefSeq:NP_414727.1 RefSeq:YP_488487.1 PDB:2F9Y PDBsum:2F9Y
ProteinModelPortal:P0ABD5 SMR:P0ABD5 DIP:DIP-35897N IntAct:P0ABD5
MINT:MINT-1228651 PaxDb:P0ABD5 PRIDE:P0ABD5
EnsemblBacteria:EBESCT00000001533 EnsemblBacteria:EBESCT00000014303
GeneID:12930759 GeneID:944895 KEGG:ecj:Y75_p0181 KEGG:eco:b0185
PATRIC:32115481 EchoBASE:EB1600 EcoGene:EG11647
BioCyc:EcoCyc:CARBOXYL-TRANSFERASE-ALPHA-MONOMER
BioCyc:ECOL316407:JW0180-MONOMER
BioCyc:MetaCyc:CARBOXYL-TRANSFERASE-ALPHA-MONOMER SABIO-RK:P0ABD5
EvolutionaryTrace:P0ABD5 Genevestigator:P0ABD5 GO:GO:0009329
Uniprot:P0ABD5
Length = 319
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 126/312 (40%), Positives = 171/312 (54%)
Query: 97 LDFEKPLVGLSKKIMDVRKMAN-DTGLDFS--DQIVSLENKYQQALKDLYTHLTPIQRVN 153
LDFE+P+ L KI + ++ D LD + +++ L K + + ++ L Q
Sbjct: 6 LDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQ 65
Query: 154 IARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTK 213
+ARHP RP LD+V ++F EL GDRA DD AIV GI +DGR M +GHQKGR TK
Sbjct: 66 LARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETK 125
Query: 214 ENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNL 273
E I+RNFGMP P GYRKALR+M A+ PI+TFIDTPGAY + +EE GQ EAIA NL
Sbjct: 126 EKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNL 185
Query: 274 RTMFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXX 333
R M L VP +K+ ML+ + + V SPE CA+ILW
Sbjct: 186 REMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAP 245
Query: 334 XXXXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQEL 393
I L +L++ D +IPEPLGGAH +P + +K + + +L + T++L
Sbjct: 246 LAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDL 305
Query: 394 LKHRNLKFRKIG 405
R + G
Sbjct: 306 KNRRYQRLMSYG 317
>TIGR_CMR|CBU_1510 [details] [associations]
symbol:CBU_1510 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:227377 "Coxiella burnetii RSA
493" [GO:0003989 "acetyl-CoA carboxylase activity" evidence=ISS]
[GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
[GO:0009317 "acetyl-CoA carboxylase complex" evidence=ISS]
UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 GO:GO:0006633 GO:GO:0003989 GO:GO:2001295
eggNOG:COG0825 HOGENOM:HOG000273832 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY
ProtClustDB:PRK05724 EMBL:AE016828 RefSeq:NP_820493.1
ProteinModelPortal:Q83BJ8 SMR:Q83BJ8 PRIDE:Q83BJ8 GeneID:1209420
GenomeReviews:AE016828_GR KEGG:cbu:CBU_1510 PATRIC:17931785
BioCyc:CBUR227377:GJ7S-1495-MONOMER Uniprot:Q83BJ8
Length = 316
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 115/309 (37%), Positives = 170/309 (55%)
Query: 97 LDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIAR 156
LDFE+P+ L KI ++R++ ++ ++++ LE K Q + ++++LT Q V +AR
Sbjct: 6 LDFEQPIAELQAKIDELRRVGTSQEINLTEEVNKLEEKNAQLTRQIFSNLTAQQIVQLAR 65
Query: 157 HPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENI 216
HP RP LD++ I F ELHGDR AI+ G+ ++G M +GHQKGR T+E I
Sbjct: 66 HPLRPYTLDYIQRIFTDFNELHGDRHYSQASAIIGGLARLNGEPVMVIGHQKGRTTQEKI 125
Query: 217 QRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM 276
RNFGM P G+RKALR+M A+ P++T IDTPGAY + +EE Q EAIA NL M
Sbjct: 126 YRNFGMARPEGFRKALRLMKLAERFSIPVITLIDTPGAYPGIGAEERNQSEAIARNLFEM 185
Query: 277 FGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXX 336
LK+P ++ LML+ A + V SPE CA+ILW
Sbjct: 186 AQLKIPIICTIIGEGCSGGALAIGVGDRTLMLQYAYYSVISPEGCASILWKSAEKAGEAA 245
Query: 337 XXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKH 396
+T + L +L + D +I EPLGGAH D ++++K + ++ L +LL+
Sbjct: 246 EALGLTANRLHELGLIDEIIKEPLGGAHRDTDAMAEKLKKHLQANLTNLQAKSANDLLEE 305
Query: 397 RNLKFRKIG 405
R ++ G
Sbjct: 306 RYRRWLSYG 314
>TIGR_CMR|CJE_0495 [details] [associations]
symbol:CJE_0495 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:195099 "Campylobacter jejuni
RM1221" [GO:0003989 "acetyl-CoA carboxylase activity" evidence=ISS]
[GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
[GO:0009317 "acetyl-CoA carboxylase complex" evidence=ISS]
UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 GO:GO:0006633 GO:GO:0003989 GO:GO:2001295
eggNOG:COG0825 HOGENOM:HOG000273832 KO:K01962 GO:GO:0009317
PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513 OMA:QLTKDIY
ProtClustDB:PRK05724 EMBL:CP000025 RefSeq:YP_178514.1
ProteinModelPortal:Q5HW21 SMR:Q5HW21 STRING:Q5HW21 GeneID:3231256
GenomeReviews:CP000025_GR KEGG:cjr:CJE0495 PATRIC:20042694
BioCyc:CJEJ195099:GJC0-505-MONOMER Uniprot:Q5HW21
Length = 312
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 120/313 (38%), Positives = 173/313 (55%)
Query: 97 LDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIAR 156
LDFEK + + + I++ + + DT + + L+ ++ + Y +L+ QR+ +AR
Sbjct: 5 LDFEKNIQQIDEDIINAQ-IKGDT-----EAVSILKKNLEKEISKTYKNLSDFQRLQLAR 58
Query: 157 HPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENI 216
HP+RP LD++ I E+HGDRA DDPAIV +G + + + +G QKGR TK+ I
Sbjct: 59 HPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKKIIVIGEQKGRGTKDKI 118
Query: 217 QRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM 276
RNFGMP P GYRKALR+ A+ PI+ IDTPGAY + +EE GQ EAIA NL +
Sbjct: 119 ARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGIGAEERGQSEAIARNLYEL 178
Query: 277 FGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXX 336
LK+P A+KL+M++N+VF V SPE CAAILW
Sbjct: 179 SDLKIPTIAIVIGEGGSGGALAIGVADKLVMMKNSVFSVISPEGCAAILWNDPAKSEAAT 238
Query: 337 XXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKH 396
+T +L + D VI EP GAH + + I + +S++EL +D +EL +
Sbjct: 239 KAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAIADYVKKSLNELENIDVRELSAN 298
Query: 397 RNLKFRKIGGFQE 409
R K K+G +QE
Sbjct: 299 RMQKILKLGAYQE 311
>TIGR_CMR|SPO_3616 [details] [associations]
symbol:SPO_3616 "acetyl-CoA carboxylase, carboxyl
transferase, alpha subunit" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0003989 "acetyl-CoA carboxylase activity" evidence=ISS]
[GO:0006633 "fatty acid biosynthetic process" evidence=ISS]
[GO:0009317 "acetyl-CoA carboxylase complex" evidence=ISS]
UniPathway:UPA00655 HAMAP:MF_00823 InterPro:IPR001095
InterPro:IPR011763 Pfam:PF03255 PRINTS:PR01069 PROSITE:PS50989
GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006633
GO:GO:0003989 GO:GO:2001295 eggNOG:COG0825 HOGENOM:HOG000273832
KO:K01962 GO:GO:0009317 PANTHER:PTHR22855:SF3 TIGRFAMs:TIGR00513
OMA:QLTKDIY ProtClustDB:PRK05724 RefSeq:YP_168811.1
ProteinModelPortal:Q5LME7 GeneID:3193834 KEGG:sil:SPO3616
PATRIC:23380711 Uniprot:Q5LME7
Length = 320
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 115/310 (37%), Positives = 166/310 (53%)
Query: 97 LDFEKPLVGLSKKIMDVRKMAN-DTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIA 155
LDFEKPL + K ++R +A + +D +++ +L+ K + L +LY LTP ++ +A
Sbjct: 5 LDFEKPLAEIEGKAEELRALARANEEMDVAEEAAALDAKAAKLLDELYRDLTPWRKCQVA 64
Query: 156 RHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKEN 215
RHP RP D+V + ++ L GDR DD A++ G+ + R M +GH+KG +TK
Sbjct: 65 RHPERPHCRDYVDALFTEYTPLAGDRNFADDLAVMGGLARFNDRPVMVIGHEKGSDTKSR 124
Query: 216 IQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRT 275
I NFGM P GYRKA+R++ A G P+VT +DT GAY +EE GQ EAIA +
Sbjct: 125 IAHNFGMARPEGYRKAVRLIEMAGRFGLPVVTLVDTAGAYPGKGAEERGQSEAIARSTEM 184
Query: 276 MFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXX 335
VP AN++ MLE++++ V SPE CA+ILW
Sbjct: 185 CLRAGVPLVSVIIGEGGSGGAVAFATANRVAMLEHSIYSVISPEGCASILWKNAEKMREA 244
Query: 336 XXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLK 395
+T +L KL + D VIPEP GGAH D + + ++ AI + EL + L+K
Sbjct: 245 AEALRLTAQDLLKLGVVDRVIPEPRGGAHRDKTAAMEAVRGAIAAMLKELDGKSAEALIK 304
Query: 396 HRNLKFRKIG 405
R KF IG
Sbjct: 305 DRRKKFLDIG 314
>UNIPROTKB|Q8IIG7 [details] [associations]
symbol:PF11_0207 "Uncharacterized protein PF11_0207"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0016020
"membrane" evidence=NAS] GO:GO:0005737 GO:GO:0016020
eggNOG:NOG12793 EMBL:AE014186 HSSP:Q8NX77 RefSeq:XP_001347878.2
ProteinModelPortal:Q8IIG7 IntAct:Q8IIG7 MINT:MINT-1550464
GeneID:810754 KEGG:pfa:PF11_0207 EuPathDB:PlasmoDB:PF3D7_1120000
HOGENOM:HOG000282317 ProtClustDB:CLSZ2500892 Uniprot:Q8IIG7
Length = 1070
Score = 183 (69.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 69/307 (22%), Positives = 148/307 (48%)
Query: 467 IQKLKKEVDHEFSEAAKAMGMQE-KFATLR---AEFSKGNSRDQLMDPILMDKITELKNE 522
++ KKE D +FS + F+ LR E SK N ++ P+ + ++ E + +
Sbjct: 403 VRNKKKEDDLDFSNVRNKKKEDDLDFSNLRNKKKEESKENDTNKSEKPLYLRRLEEYRKK 462
Query: 523 FNQGLASAPNYASLK-YKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKE 581
+ L S N ++K ++ + + + K + + K+E+ ++ +E+ + +IKE
Sbjct: 463 --KKLESQANDTAMKMHEKEQIDDIQERKEEIKEE-----FKEEVKEEIKEI--KEEIKE 513
Query: 582 KMEAIKAKLQDSGASSFSDLEDDLKEKLVETK---KEIESELIDGLESLGLDVEVVKSKA 638
E IK ++++ ++++++KE++ E K KE++ E+ + E + E +K +
Sbjct: 514 VKEEIKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEVKEEIKEVKEEIKEVKEEIKEEI 573
Query: 639 KELSEQTSFSNFRSKMXXXXXXXXXXXXDVINS--SDLKDMIELLKLEIAKAGKK----- 691
KE+ E+ + ++ + I ++K++ E +K E+ + K+
Sbjct: 574 KEVKEEIK-EEIKEEIKEVKEEIKEEVKEEIKEVKEEIKEVKEEIKEEVKEEIKEVKEEI 632
Query: 692 PDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEH 749
+VK + K I+ ++++IK+ + E + E+KE EEL +IS T N EH
Sbjct: 633 KEVKEEIKEEIKEVKEEIKEEVKEEIKE-EIKEIKEELKNDISSETTKEEK-----NTEH 686
Query: 750 AKDDSSK 756
K+++ K
Sbjct: 687 KKEETEK 693
Score = 152 (58.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 59/287 (20%), Positives = 143/287 (49%)
Query: 450 KAKESSTKPPDAALNVM-IQKL--KKEVDHEFSEAAKAMGMQEKFATL--RAEFSKGNSR 504
++KE+ T + L + +++ KK+++ + ++ A M +E+ + R E K +
Sbjct: 438 ESKENDTNKSEKPLYLRRLEEYRKKKKLESQANDTAMKMHEKEQIDDIQERKEEIKEEFK 497
Query: 505 DQLMDPI--LMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKL 562
+++ + I + ++I E+K E + + + K ++ +E K + K ++
Sbjct: 498 EEVKEEIKEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEVKE--EIKEVKEEI 555
Query: 563 KQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELID 622
K E+ ++ +EV + +IKE+++ +K ++++ ++++++KE++ E KE++ E+ +
Sbjct: 556 K-EVKEEIKEV--KEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEVKEEIKEVKEEIKE 612
Query: 623 GLESLGLDVEVVKSKAKELSEQTSF--SNFRSKMXXXXXXXXXXXXDVINSSDLKDMIEL 680
E + E VK + KE+ E+ + ++ + I ++K++ E
Sbjct: 613 VKEEIK---EEVKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEVKEEIKE-EIKEIKEE 668
Query: 681 LKLEIAKAGKKPDVKSKCKIQALEQQ--IKQRLSEAVNSSELKEKHE 725
LK +I+ K + ++ K + E++ I +R+ + ELKEK E
Sbjct: 669 LKNDISSETTKEEKNTEHKKEETEKKKFIPKRV--IMYQQELKEKEE 713
Score = 147 (56.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 61/282 (21%), Positives = 135/282 (47%)
Query: 467 IQKLKKEVDHEFSEAAKAMGMQE-KFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQ 525
++ KKE D +FS + F+ +R + D L L +K E E +
Sbjct: 389 VRNKKKEDDLDFSNVRNKKKEDDLDFSNVRNK----KKEDDLDFSNLRNKKKEESKENDT 444
Query: 526 GLASAPNYASL--KY-KLDMLKEFSNAKSL-LDSKNKAAKL---KQEINKKFEEVICRP- 577
+ P Y +Y K L+ +N ++ + K + + K+EI ++F+E +
Sbjct: 445 NKSEKPLYLRRLEEYRKKKKLESQANDTAMKMHEKEQIDDIQERKEEIKEEFKEEVKEEI 504
Query: 578 -DIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKS 636
+IKE+++ +K ++++ ++++++KE++ E KE++ E+ + E + E +K
Sbjct: 505 KEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEVKEEIKEVKEEIKE 564
Query: 637 KAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKS 696
+E+ E+ + ++ + I ++K+ I+ +K EI + K ++K
Sbjct: 565 VKEEIKEE--IKEVKEEIKEEIKEEIKEVKEEIKE-EVKEEIKEVKEEIKEV--KEEIKE 619
Query: 697 KCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATK 736
+ K I+ ++++IK+ + E + E+KE EE+ E+ + K
Sbjct: 620 EVKEEIKEVKEEIKE-VKEEIKE-EIKEVKEEIKEEVKEEIK 659
Score = 48 (22.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 21/68 (30%), Positives = 29/68 (42%)
Query: 65 KDPKDVD-PNVKGGVLTHLSHFKPLKEKPKPVTLDFEKPLVGLSKK-----IMDVRKMAN 118
K+ +DVD N++ F ++ K K LDF V KK DVR
Sbjct: 155 KEEEDVDFSNLRNKKKEDDVDFSNVRNKKKEDDLDFSN--VRNKKKEDDVNFSDVRNKKK 212
Query: 119 DTGLDFSD 126
+ LDFS+
Sbjct: 213 EDDLDFSN 220
Score = 47 (21.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 21/68 (30%), Positives = 28/68 (41%)
Query: 65 KDPKDVD-PNVKGGVLTHLSHFKPLKEKPKPVTLDFEKPLVGLSKK-----IMDVRKMAN 118
K D+D NV+ +F ++ K K LDF V KK DVR
Sbjct: 211 KKEDDLDFSNVRNKKKEDDVNFSDVRNKKKEDDLDFSN--VRNKKKEDDVNFSDVRNKKK 268
Query: 119 DTGLDFSD 126
+ LDFS+
Sbjct: 269 EDALDFSN 276
>DICTYBASE|DDB_G0271058 [details] [associations]
symbol:vilC "villin-like protein C" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR003128 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51089 SMART:SM00262 dictyBase:DDB_G0271058 GO:GO:0007010
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF47050
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 eggNOG:NOG324767
RefSeq:XP_001134479.1 ProteinModelPortal:Q1ZXP5
EnsemblProtists:DDB0232136 GeneID:8617650 KEGG:ddi:DDB_G0271058
InParanoid:Q1ZXP5 OMA:DSRTEND Uniprot:Q1ZXP5
Length = 1528
Score = 141 (54.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 86/352 (24%), Positives = 145/352 (41%)
Query: 380 ESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSXXXXXX 439
E D+L K ++QE K K K + + + K+K +++E +A K +
Sbjct: 277 ELADKLEK-ESQE--KELAEKLEKEKELADKLEKEQKEKEEKERQEKELADKLAKEQKEK 333
Query: 440 XXXXXXQQILKA---KESSTK-PPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFAT-- 493
++ K KE + K + + KL+KE + S QEK
Sbjct: 334 EEKELADKLEKERQEKELADKLEKEKQEKELADKLEKEKQEKESLEKLEKEKQEKELADK 393
Query: 494 LRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLL 553
L E + +++ + +K E K ++ LA+A A + KL+ + K L
Sbjct: 394 LAKEQKEKEEKEEKEEKEKQEK--EEKERKDKELAAAAAAAETE-KLEK-ERLEKEKKEL 449
Query: 554 DSKNKAAKL-KQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVET 612
+ K A KL K+++ K+ + + + KEK A K + + LE + KEK E
Sbjct: 450 EEKELAEKLEKEKLEKELTDKL-EKEKKEKELADKLEKEKQDKELADKLEKEQKEK--EE 506
Query: 613 KKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSS 672
K+ E EL D LE D E+ AKE E+ + V
Sbjct: 507 KQRKEKELADKLEKEKQDKELADKLAKEKEEKERKEKELADKLEKEKKDKELADKVTKEK 566
Query: 673 DLKDMIEL-LKLEIAKAGKKPDVKSKCKIQALEQQIKQRLS-EAVNSSELKE 722
+ KD E KL++ K K+ ++K K + + E++ + RL E ++ S KE
Sbjct: 567 EEKDKKEKEFKLKLEKEQKEKELKLKQEREFAEKEERDRLEREKISKSIEKE 618
>UNIPROTKB|I3LBD0 [details] [associations]
symbol:RABGAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009057
GO:GO:0003677 Gene3D:1.10.10.60 EMBL:CU469076
Ensembl:ENSSSCT00000023452 GeneTree:ENSGT00700000104647 OMA:NEVHAKK
Uniprot:I3LBD0
Length = 327
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 69/299 (23%), Positives = 131/299 (43%)
Query: 450 KAKESSTKPPDAALNVMI-QKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLM 508
+++E++ K + A N+ I QK K+ + E+ + QE F + N R
Sbjct: 50 RSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIE---RFERENRR---- 102
Query: 509 DPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKL-KQEIN 567
L + L+ E N LA + + K+ + K+ NA+ D+ NK + KQ++
Sbjct: 103 ---LQEANMRLEQE-NDDLA----HELVTSKIALRKDLDNAEEKADALNKELLMTKQKLI 154
Query: 568 KKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEK--LVETKKEIESELIDGLE 625
EE K ++E A+L++ E ++K+ ++ K+I S+L + LE
Sbjct: 155 DAEEE-------KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLE 207
Query: 626 SLG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSD-LKDMIEL 680
+++E ++ K + F N ++ D + LK+ +
Sbjct: 208 KQQAANKVEIEKIRQKVDDCERCREFFNKEGRIKGISSAKEVLDEDTDEEKETLKNQLRE 267
Query: 681 LKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPG 739
++LE+A+ K V+++CKIQ LE + L+E V +++ K ++ I AT G
Sbjct: 268 MELELAQT-KLQLVEAECKIQDLEHHLGLALNE-VQAAK-KTWFNRTLSSIKTATGVQG 323
>CGD|CAL0006033 [details] [associations]
symbol:orf19.6148 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0030473 "nuclear migration along microtubule"
evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=IEA] InterPro:IPR011579 Pfam:PF01637 CGD:CAL0006033
GO:GO:0005524 eggNOG:NOG12793 EMBL:AACQ01000160 EMBL:AACQ01000159
RefSeq:XP_712354.1 RefSeq:XP_712390.1 ProteinModelPortal:Q59RN5
GeneID:3646018 GeneID:3646040 KEGG:cal:CaO19.13567
KEGG:cal:CaO19.6148 Uniprot:Q59RN5
Length = 1040
Score = 136 (52.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 69/314 (21%), Positives = 141/314 (44%)
Query: 469 KLKKEVDHEFSEAAKAMG-MQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGL 527
K K E D++ ++ ++ + ++ + TL+A +K ++ + L D+++ELK +
Sbjct: 513 KEKSESDYKLTDTSEIVNDLKSQIETLKANLNKSEEEREIQNKKL-DQVSELKELKELKV 571
Query: 528 ASAPNYAS-LKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEV-ICRPDIKEKMEA 585
N S L+ +L KE + + L +A ++ + + E+ I +K++
Sbjct: 572 EELSNNLSKLQQELHR-KEIESNEQLEKLHGVSADKEKSLQQSIEQSKIYINSLKDQ--- 627
Query: 586 IKAKLQDSGASSFSDLEDDLKEKLVET------KKEIESE-LIDGLESLGLDVEVVKSKA 638
AK + + LE + ++KLVE + ++E E L+ L D + +K++
Sbjct: 628 -NAKTDRNWEIKYGTLEQN-QQKLVEEHLANRQRDQLEIEKLVKSKTELEADNQALKNQL 685
Query: 639 KELSEQTSFSNFRS---KMXXXXXXXXXXXXDVINSSDLKDMIE-LLKLEIAKAGKKPDV 694
E+S+Q S S K ++++ +LK IE LLK K G+ ++
Sbjct: 686 TEISKQFSTLGVESSELKKQLEETQIKYDQAEIVHQ-ELKAQIEKLLKESAGKDGQLKEL 744
Query: 695 KSKCK--IQALEQQIKQRLSEAVNS--SELKEKHEELMAEISDATKSPGGLDGGVNNEHA 750
+ + L+ + ++++ E + E++EKH++ + EI D+ + +NNEH
Sbjct: 745 NQSHEKFVNELKNEHEKQVKETKDQIIKEMEEKHQQAIKEIEDSHNE--NIKE-INNEHE 801
Query: 751 KDDSSKYDESRVEI 764
D EI
Sbjct: 802 NKAKCIIDSLNEEI 815
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 59/257 (22%), Positives = 118/257 (45%)
Query: 513 MDKITELKNEFNQGLASAPNYASLKYKLD-MLKEFSNAK-SLLDSKNKAAK-LKQEINKK 569
+D I +LK +F A ++ LD L E + L ++KN K L E +
Sbjct: 380 VDSIKDLKQDFLAFKQEAAGIINVLNDLDAQLSELKQKQIDLENTKNDQIKELVSEHELQ 439
Query: 570 FEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGL 629
E++ D+ EK + ++ +L S +L + E+K+++E EL + L+++
Sbjct: 440 IEKI--SKDLTEKFKLVETQLLSKHESHVQQFTKELIAES-ESKQQVEEEL-ENLKTIH- 494
Query: 630 DVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAG 689
K + L +T S+ +K +++N DLK IE LK + K+
Sbjct: 495 ----AKDSVRILELETQLSD-AAKEKSESDYKLTDTSEIVN--DLKSQIETLKANLNKSE 547
Query: 690 KKPDVKSKCKIQALE-QQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNE 748
++ ++++K Q E +++K+ E + S+ L + +EL + ++ + L G V+ +
Sbjct: 548 EEREIQNKKLDQVSELKELKELKVEEL-SNNLSKLQQELHRKEIESNEQLEKLHG-VSAD 605
Query: 749 HAKDDSSKYDESRVEIN 765
K ++S++ IN
Sbjct: 606 KEKSLQQSIEQSKIYIN 622
>UNIPROTKB|F1MDZ2 [details] [associations]
symbol:LOC100852255 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0031133 "regulation of axon diameter" evidence=IEA] [GO:0008088
"axon cargo transport" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0000226 GO:GO:0005198 GO:GO:0031594 GO:GO:0008088
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GeneTree:ENSGT00560000076873 GO:GO:0045110 OMA:GPGGDYK
EMBL:DAAA02023646 IPI:IPI01000656 Ensembl:ENSBTAT00000036581
Uniprot:F1MDZ2
Length = 926
Score = 135 (52.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 70/299 (23%), Positives = 128/299 (42%)
Query: 463 LNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPI---LMDKITEL 519
L+ +Q L+ EV F + + + A ++A +D L I L + ++L
Sbjct: 220 LDKKVQSLQDEV--AFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISTALKEIRSQL 277
Query: 520 KNEFNQGLASAPNYASLKY-KLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPD 578
++ +Q + A + +Y KL E N +++ +K + A+ ++++ K E+
Sbjct: 278 ESHSDQNMHQAEEWFKCRYAKLTEAAE-QNKEAIRSAKEEIAEYRRQLQSKSIELESVRG 336
Query: 579 IKEKMEAIKAKLQDS---GASSFSDLEDDLKEKLVETKKEIESELIDGLESLG----LDV 631
KE +E + +++ SS+ D L+ +L TK E+ L + + L LD+
Sbjct: 337 TKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 396
Query: 632 EVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKL-------- 683
E+ + E+T FS F + I+S K +E KL
Sbjct: 397 EIAAYRKLLEGEETRFSTFAGSITGPLYTHRQPSI-AISSKIQKTKVEAPKLKVQHKFVE 455
Query: 684 EIAKAGKKPDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHE--ELMAEISDATKSP 738
EI + K D KS+ + + A+ +++ + E V E +EK E E E+ A KSP
Sbjct: 456 EIIEETKVEDEKSEMEEALTAITEELAVSVKEEVKEEEAEEKEEKEEAEEEVVAAKKSP 514
>UNIPROTKB|B7Z2B4 [details] [associations]
symbol:RABGAP1 "Rab GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000195
InterPro:IPR009057 Pfam:PF00566 PROSITE:PS50086 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.10.60 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 HOGENOM:HOG000007923 EMBL:AL365338 EMBL:AC007066
UniGene:Hs.271341 HGNC:HGNC:17155 ChiTaRS:RABGAP1 EMBL:AL358946
EMBL:AK294531 IPI:IPI00942440 SMR:B7Z2B4 STRING:B7Z2B4
Ensembl:ENST00000373643 UCSC:uc011lzj.2 HOVERGEN:HBG105880
Uniprot:B7Z2B4
Length = 408
Score = 132 (51.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 69/299 (23%), Positives = 131/299 (43%)
Query: 450 KAKESSTKPPDAALNVMI-QKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLM 508
+++E++ K + A N+ I QK K+ + E+ + QE F + N R
Sbjct: 131 RSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIE---RFERENRR---- 183
Query: 509 DPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKL-KQEIN 567
L + L+ E N LA + + K+ + K+ NA+ D+ NK + KQ++
Sbjct: 184 ---LQEANMRLEQE-NDDLA----HELVTSKIALRKDLDNAEEKADALNKELLMTKQKLI 235
Query: 568 KKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEK--LVETKKEIESELIDGLE 625
EE K ++E A+L++ E ++K+ ++ K+I S+L + LE
Sbjct: 236 DAEEE-------KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLE 288
Query: 626 SLG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSD-LKDMIEL 680
+++E ++ K + F N ++ D + LK+ +
Sbjct: 289 KQQTANKVEIEKIRQKVDDCERCREFFNKEGRVKGISSTKEVLDEDTDEEKETLKNQLRE 348
Query: 681 LKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPG 739
++LE+A+ K V+++CKIQ LE + L+E V +++ K ++ I AT G
Sbjct: 349 MELELAQT-KLQLVEAECKIQDLEHHLGLALNE-VQAAK-KTWFNRTLSSIKTATGVQG 404
Score = 42 (19.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 113 VRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPI 149
+R++ D + LE Q+ + DLY H I
Sbjct: 19 LRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDI 55
>UNIPROTKB|F1RJU6 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9823
"Sus scrofa" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0031133 "regulation of axon diameter" evidence=IEA] [GO:0008088
"axon cargo transport" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0000226 GO:GO:0005198 GO:GO:0031594 GO:GO:0008088
GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GeneTree:ENSGT00560000076873 GO:GO:0045110 OMA:GPGGDYK
EMBL:CT978650 Ensembl:ENSSSCT00000010576 Uniprot:F1RJU6
Length = 934
Score = 134 (52.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 70/298 (23%), Positives = 128/298 (42%)
Query: 463 LNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPI---LMDKITEL 519
L+ +Q L+ EV F + + + A ++A +D L I L + ++L
Sbjct: 220 LDKKVQSLQDEV--AFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISSALKEIRSQL 277
Query: 520 KNEFNQGLASAPNYASLKY-KLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPD 578
+ +Q + A + +Y KL E N +++ +K + A+ ++++ K E+
Sbjct: 278 ECHSDQNMHQAEEWFKCRYAKLTEAAE-QNKEAIRSAKEEIAEYRRQLQSKSIELESVRG 336
Query: 579 IKEKMEAIKAKLQDS---GASSFSDLEDDLKEKLVETKKEIESELIDGLESLG----LDV 631
KE +E + +++ SS+ D L+ +L TK E+ L + + L LD+
Sbjct: 337 TKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 396
Query: 632 EVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKL-------- 683
E+ + E+T FS F + I+S K +E KL
Sbjct: 397 EIAAYRKLLEGEETRFSTFAGSITGPLYTHRQPSI-TISSKIQKTKVEAPKLKVQHKFVE 455
Query: 684 EIAKAGKKPDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAE-ISDATKSP 738
EI + K D KS+ + + A+ +++ + E V E +EK E+ AE + A KSP
Sbjct: 456 EIIEETKVEDEKSEMEEALTAIAEELAVSMKEEVKEEEAEEKEEKQEAEEVVAAKKSP 513
>UNIPROTKB|Q81NE9 [details] [associations]
symbol:BAS3021 "LPXTG-motif cell wall anchor domain
protein" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00746 GO:GO:0005618 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR019948 InterPro:IPR019931
TIGRFAMs:TIGR01167 RefSeq:NP_845554.1 RefSeq:YP_019891.1
RefSeq:YP_029278.1 ProteinModelPortal:Q81NE9 DNASU:1084110
EnsemblBacteria:EBBACT00000012504 EnsemblBacteria:EBBACT00000014748
EnsemblBacteria:EBBACT00000022033 GeneID:1084110 GeneID:2820088
GeneID:2852167 KEGG:ban:BA_3254 KEGG:bar:GBAA_3254 KEGG:bat:BAS3021
HOGENOM:HOG000093734 OMA:SAMLEMI ProtClustDB:CLSK916980
BioCyc:BANT260799:GJAJ-3083-MONOMER
BioCyc:BANT261594:GJ7F-3187-MONOMER Uniprot:Q81NE9
Length = 372
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 64/285 (22%), Positives = 126/285 (44%)
Query: 446 QQILKAKESSTKPP-DAALNVMIQKLKKEVDHEFSEAAKAMGM-QEKFATLRAEFSKGNS 503
+Q L AK K D LN + K+K+ VD + +E + + EK ++ + ++
Sbjct: 47 KQGLDAKLQQHKENVDQTLNEL-NKVKENVDTKVNELHERKQVADEKINEIKQHKQELDA 105
Query: 504 RDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLD-MLKEFSNAKSLLDSK-NKAAK 561
+ Q I DKI E+K Q K +D + E K +D K N+ +
Sbjct: 106 KLQQDKQIAEDKIAEIKEHKKQVEDKVAEVKEHKQNIDNKVNEIKEHKQTVDEKVNEMKQ 165
Query: 562 LKQEINKKFEEVI-CRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESEL 620
K+ I++K E+ + + EK+ +K K + + ++L+++ K T +E++ ++
Sbjct: 166 HKENIDQKVNELKEVKKQVDEKLAELK-KAKQTAEDKLAELKEN-KPNTGNTLEELK-KI 222
Query: 621 IDGLESLGLDVEVVKSKAK-ELSE-QTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMI 678
L+SL ++E+ K K +L+ Q + + +K+ D+ S K +
Sbjct: 223 KSNLDSLSANLELAKQDVKNKLAALQEARQDLINKINEIKQSKQTVSDDL---SKKKQDL 279
Query: 679 ELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEK 723
++ + KK D K +I +Q I +++E S + + K
Sbjct: 280 DIKINDFKHTEKKIDDKL-AEIHTTKQNIDNKINEVSQSKQTETK 323
>TIGR_CMR|BA_3254 [details] [associations]
symbol:BA_3254 "LPXTG-motif cell wall anchor domain
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00746 GO:GO:0005618 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR019948 InterPro:IPR019931
TIGRFAMs:TIGR01167 RefSeq:NP_845554.1 RefSeq:YP_019891.1
RefSeq:YP_029278.1 ProteinModelPortal:Q81NE9 DNASU:1084110
EnsemblBacteria:EBBACT00000012504 EnsemblBacteria:EBBACT00000014748
EnsemblBacteria:EBBACT00000022033 GeneID:1084110 GeneID:2820088
GeneID:2852167 KEGG:ban:BA_3254 KEGG:bar:GBAA_3254 KEGG:bat:BAS3021
HOGENOM:HOG000093734 OMA:SAMLEMI ProtClustDB:CLSK916980
BioCyc:BANT260799:GJAJ-3083-MONOMER
BioCyc:BANT261594:GJ7F-3187-MONOMER Uniprot:Q81NE9
Length = 372
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 64/285 (22%), Positives = 126/285 (44%)
Query: 446 QQILKAKESSTKPP-DAALNVMIQKLKKEVDHEFSEAAKAMGM-QEKFATLRAEFSKGNS 503
+Q L AK K D LN + K+K+ VD + +E + + EK ++ + ++
Sbjct: 47 KQGLDAKLQQHKENVDQTLNEL-NKVKENVDTKVNELHERKQVADEKINEIKQHKQELDA 105
Query: 504 RDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLD-MLKEFSNAKSLLDSK-NKAAK 561
+ Q I DKI E+K Q K +D + E K +D K N+ +
Sbjct: 106 KLQQDKQIAEDKIAEIKEHKKQVEDKVAEVKEHKQNIDNKVNEIKEHKQTVDEKVNEMKQ 165
Query: 562 LKQEINKKFEEVI-CRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESEL 620
K+ I++K E+ + + EK+ +K K + + ++L+++ K T +E++ ++
Sbjct: 166 HKENIDQKVNELKEVKKQVDEKLAELK-KAKQTAEDKLAELKEN-KPNTGNTLEELK-KI 222
Query: 621 IDGLESLGLDVEVVKSKAK-ELSE-QTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMI 678
L+SL ++E+ K K +L+ Q + + +K+ D+ S K +
Sbjct: 223 KSNLDSLSANLELAKQDVKNKLAALQEARQDLINKINEIKQSKQTVSDDL---SKKKQDL 279
Query: 679 ELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEK 723
++ + KK D K +I +Q I +++E S + + K
Sbjct: 280 DIKINDFKHTEKKIDDKL-AEIHTTKQNIDNKINEVSQSKQTETK 323
>CGD|CAL0001468 [details] [associations]
symbol:SYS3 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0043001
"Golgi to plasma membrane protein transport" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 CGD:CAL0001468
eggNOG:NOG12793 EMBL:AACQ01000131 GO:GO:0000042 Gene3D:1.10.220.60
RefSeq:XP_713243.1 GeneID:3645119 KEGG:cal:CaO19.2410
Uniprot:Q59UF5
Length = 895
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 84/405 (20%), Positives = 167/405 (41%)
Query: 376 IAINESMDELG----KMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASK 431
+ + ES EL ++DT + K + + +KI E + I + + K + K
Sbjct: 204 VKLEESNKELNNDVKRLDTMQ--KEKEVMGKKIDSMSEELEIINNQNDKLTKD---LKDK 258
Query: 432 TSXXXXXXXXXXXXQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKF 491
+K ES+T LN +++ KEV E K+ +E
Sbjct: 259 EEKIESLKLEITDRDNKIKDLESNTSSNSKELNTELEE-PKEVPTEKVNQDKSSSGEEN- 316
Query: 492 ATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKS 551
+ S G+S D +L +I++LK++ L++ ++ E KS
Sbjct: 317 --TDKDSSVGDSSDN--SDVLNTEISQLKSQ----LSTKETEVE-----ELTNEVRTLKS 363
Query: 552 LLDSKNKAAK-LKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLV 610
L+ KN+ + L+ + + E++ K++++++K Q S + S ++D ++
Sbjct: 364 QLNDKNEEIEDLRDSVKEIGNELVTS---KDEIKSLKNS-QKSTDNEDSTTKEDTNTQIN 419
Query: 611 ETKKEIESELIDGLE-SLGLDVEVVKSKAKELSEQTSFSNFRS-------KMXXXXXXXX 662
+ + + S+L + E LDV +SK KE + S R K+
Sbjct: 420 DWELKYNSQLKENKELKEELDVATKESKEKEKERKKSEDQLRKQIQTLKQKLESTENKFE 479
Query: 663 XXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNS----- 717
D+ N S+ K+ +E E++K K D K +I +L+ + + ++N
Sbjct: 480 SKTKDLKNLSEEKEKLEKRISELSKF-KSNDSSLKLEISSLKSSLTNK-DNSINELKTQV 537
Query: 718 SELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRV 762
ELK+ ++ L +++ + +KS L + + KD + + V
Sbjct: 538 DELKQSNKSLNSKVEELSKSNNELQSN-SMDFLKDKNELLTKQEV 581
>UNIPROTKB|Q59UF5 [details] [associations]
symbol:SYS3 "Potential GRIP domain Golgi protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000237 Pfam:PF01465
PROSITE:PS50913 CGD:CAL0001468 eggNOG:NOG12793 EMBL:AACQ01000131
GO:GO:0000042 Gene3D:1.10.220.60 RefSeq:XP_713243.1 GeneID:3645119
KEGG:cal:CaO19.2410 Uniprot:Q59UF5
Length = 895
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 84/405 (20%), Positives = 167/405 (41%)
Query: 376 IAINESMDELG----KMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASK 431
+ + ES EL ++DT + K + + +KI E + I + + K + K
Sbjct: 204 VKLEESNKELNNDVKRLDTMQ--KEKEVMGKKIDSMSEELEIINNQNDKLTKD---LKDK 258
Query: 432 TSXXXXXXXXXXXXQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKF 491
+K ES+T LN +++ KEV E K+ +E
Sbjct: 259 EEKIESLKLEITDRDNKIKDLESNTSSNSKELNTELEE-PKEVPTEKVNQDKSSSGEEN- 316
Query: 492 ATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKS 551
+ S G+S D +L +I++LK++ L++ ++ E KS
Sbjct: 317 --TDKDSSVGDSSDN--SDVLNTEISQLKSQ----LSTKETEVE-----ELTNEVRTLKS 363
Query: 552 LLDSKNKAAK-LKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLV 610
L+ KN+ + L+ + + E++ K++++++K Q S + S ++D ++
Sbjct: 364 QLNDKNEEIEDLRDSVKEIGNELVTS---KDEIKSLKNS-QKSTDNEDSTTKEDTNTQIN 419
Query: 611 ETKKEIESELIDGLE-SLGLDVEVVKSKAKELSEQTSFSNFRS-------KMXXXXXXXX 662
+ + + S+L + E LDV +SK KE + S R K+
Sbjct: 420 DWELKYNSQLKENKELKEELDVATKESKEKEKERKKSEDQLRKQIQTLKQKLESTENKFE 479
Query: 663 XXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNS----- 717
D+ N S+ K+ +E E++K K D K +I +L+ + + ++N
Sbjct: 480 SKTKDLKNLSEEKEKLEKRISELSKF-KSNDSSLKLEISSLKSSLTNK-DNSINELKTQV 537
Query: 718 SELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRV 762
ELK+ ++ L +++ + +KS L + + KD + + V
Sbjct: 538 DELKQSNKSLNSKVEELSKSNNELQSN-SMDFLKDKNELLTKQEV 581
>POMBASE|SPAC4H3.14c [details] [associations]
symbol:SPAC4H3.14c "sequence orphan" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] PomBase:SPAC4H3.14c GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 eggNOG:NOG12793 PIR:T38894 RefSeq:NP_594350.1
ProteinModelPortal:Q10221 EnsemblFungi:SPAC4H3.14c.1 GeneID:2543546
KEGG:spo:SPAC4H3.14c OrthoDB:EOG41NXW3 NextBio:20804555
Uniprot:Q10221
Length = 345
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 68/306 (22%), Positives = 143/306 (46%)
Query: 475 DHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYA 534
DH + + K Q AT++ E + + +LM + + K L SA N
Sbjct: 56 DHAKTGSRKPSSGQ-LIATMQNEIDRLKKEGDKVSILLMQERKKRKE-----LESAKN-- 107
Query: 535 SLKYKLDMLK-EFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQ-- 591
+L D LK + ++ S+++ K +AAK +Q+I ++FE I D+ E+ + +K +++
Sbjct: 108 NLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQIT--DLLEEQQQLKLEIERL 165
Query: 592 ---DSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFS 648
A+S ++ + KE L E +E+ +E + L ++ ++ +E+ E+T
Sbjct: 166 EAETERANSETEQYEKQKEALEEEYEELRNECLKHDPQLDAEIRTLQDTFEEV-ERT--- 221
Query: 649 NFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIK 708
++ + NS+ K+ I + LE KA K D+ S+ IQ +Q++
Sbjct: 222 -LTKQVSDAKIADKPLKDSMFNSNSEKEKI-MHALE--KAEKDADIYSEF-IQQYMEQLE 276
Query: 709 QRLSEAVNSSE-LKEKHEELMAEISDATK--SPGGLDGGVNNEHAKDDSSKYDESRVEIN 765
L ++ + E + + E+ A +++++ + DG +N + D+S+ + + +
Sbjct: 277 SSLEKSSTAIENAQNRLAEMTAHLAESSDYDNDDDTDGIINETDYELDTSQSEFAT--LT 334
Query: 766 VGANRS 771
+N+S
Sbjct: 335 TSSNKS 340
>DICTYBASE|DDB_G0302588 [details] [associations]
symbol:DDB_G0302588 "RanBP2-type zinc finger"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001876 PROSITE:PS01358 SMART:SM00547
dictyBase:DDB_G0302588 GO:GO:0008270 EMBL:AAFI02000003
GO:GO:0005622 RefSeq:XP_002649209.1 EnsemblProtists:DDB0302589
GeneID:8616202 KEGG:ddi:DDB_G0302588 OMA:VKFESPA Uniprot:C7FZW3
Length = 3566
Score = 137 (53.3 bits), Expect = 0.00012, P = 0.00012
Identities = 72/328 (21%), Positives = 135/328 (41%)
Query: 450 KAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMD 509
+ S +KP + N + + KE + + + ++++ L+ E K + ++ +
Sbjct: 2640 QTSSSPSKPSPSPSNPTFESINKEKESVEDKNQEKDELKDEKDELKDENEKKDENEKKEE 2699
Query: 510 PILMDKITELKN---EFNQGLASAPNYASLKYKLDML----KEFSNAKSLLDSKNKAAKL 562
+ DK E + E Q + S + KL+ + KE ++L ++K
Sbjct: 2700 TVESDKEKEKEETLEETKQSIESDKKEEKKEEKLEEIVQSDKEKEKEETLEETKQSIESD 2759
Query: 563 KQEINK--KFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESEL 620
K+E K K EE++ KEK E ++ Q + D +++ E++V++ KE E E
Sbjct: 2760 KKEDEKEEKLEEIVESDKEKEKEETLEETKQSIESDKKEDEKEEKLEEIVQSDKEKEKE- 2818
Query: 621 IDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIEL 680
+ LE + +E K ++ E+ FS + + +LKD +
Sbjct: 2819 -ETLEEIKQSIESESDKKEDEMEKV-FSRIEETIKPNFFSTKEDEEE--KGDELKDEKDE 2874
Query: 681 LKLEIAKAGKKP------DVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDA 734
+ EI +K + K + E + ++ L E V S + KEK EE + E
Sbjct: 2875 NENEIESDNEKEKEETLEETKQSIESDKKEDEKEETLEEIVQSDKEKEK-EETLEETKQP 2933
Query: 735 TKSPGGLDGGVNN-EHAKD-DSSKYDES 760
++ D N E K D+ K DE+
Sbjct: 2934 IETDKKEDEKENETEPEKHIDNEKKDEN 2961
>UNIPROTKB|E2QSV1 [details] [associations]
symbol:NEFM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060052 "neurofilament cytoskeleton
organization" evidence=IEA] [GO:0045110 "intermediate filament
bundle assembly" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0008088 "axon cargo transport" evidence=IEA]
[GO:0005883 "neurofilament" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 GO:GO:0000226
GO:GO:0005198 GO:GO:0031594 GO:GO:0008088 GO:GO:0005883
GO:GO:0060052 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 GO:GO:0031133
GO:GO:0045110 Ensembl:ENSCAFT00000014336 Uniprot:E2QSV1
Length = 852
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 71/318 (22%), Positives = 133/318 (41%)
Query: 463 LNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPI---LMDKITEL 519
L+ +Q L+ EV F + + + A ++A +D L I L + ++L
Sbjct: 220 LDKKVQSLQDEV--AFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISSALKEIRSQL 277
Query: 520 KNEFNQGLASAPNYASLKY-KLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPD 578
+ +Q + A + +Y KL E N +++ +K + A+ ++++ K E+
Sbjct: 278 ECHSDQNMHQAEEWFKCRYAKLTEAAE-QNKEAIRSAKEEIAEYRRQLQSKRIELESVRG 336
Query: 579 IKEKMEAIKAKLQDS---GASSFSDLEDDLKEKLVETKKEIESELIDGLESLG----LDV 631
KE +E + +++ SS+ D L+ +L TK E+ L + + L LD+
Sbjct: 337 TKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 396
Query: 632 EVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKL-------- 683
E+ + E+T FS F + I+S K +E KL
Sbjct: 397 EIAAYRKLLEGEETRFSTFAGSITGPLYTHRQPSV-TISSKIQKTKVEAPKLKVQHKFVE 455
Query: 684 EIAKAGKKPDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGL 741
EI + K D KS+ + + A+ +++ + E E +EK EE E ATK
Sbjct: 456 EIIEETKVEDEKSEMEEALTAIAEELAVSMKEE-KEEEAEEKEEEQAEEEVVATKKSPEE 514
Query: 742 DGGVNNEHAKDDSSKYDE 759
+G E +++ + +E
Sbjct: 515 EGEKEEEEGQEEEEEEEE 532
>UNIPROTKB|F1P0K1 [details] [associations]
symbol:RRBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GeneTree:ENSGT00530000063895 EMBL:AADN02041186
IPI:IPI00573911 Ensembl:ENSGALT00000015273 OMA:SERQNYT
ArrayExpress:F1P0K1 Uniprot:F1P0K1
Length = 802
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 65/287 (22%), Positives = 130/287 (45%)
Query: 450 KAKESSTKPPDAAL-NVMIQKLKKEVDHEFSEAAKAMG-MQEKFATLRAEFSKGNSRDQL 507
K K+ + + DAA +++L KE+ E ++AA + ++E+ T E + +R Q
Sbjct: 106 KEKQLTAEQEDAAAARNKLRELSKELAAEKAKAAASESKLKEQLVTREREITAVQARMQA 165
Query: 508 MDPILMDKITELKNEFN---QGLASAPN--YASLKYKLDMLKEFSN-AKSLLDSKNKA-- 559
+++ +L+ + + L + PN A L+ + +L++ N A S +SK A
Sbjct: 166 SYQDHVNETQQLQGKIRALQEQLENGPNTQLARLQQENSILRDALNQATSQTESKQNAEL 225
Query: 560 AKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASS---FSDLEDDLKEKLVETKKEI 616
AKL+QE NK +E+ + ++ ++ E K + A+S L+ +E +K +
Sbjct: 226 AKLRQECNKLMKELSEKSEVLQQEEQQKKSWEIKAAASEKQIEQLQTSQREMEATLQKRL 285
Query: 617 ESELIDGLESLGLDVE-VVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLK 675
+ E+ D L +V K +Q S + ++K+ ++ LK
Sbjct: 286 D-EVSDELRKTQTSYRSLVADAEKAKGQQQSIAELQAKLLSSETEVKSKLLEL---DSLK 341
Query: 676 DMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKE 722
++ E + ++ +KS I+AL + + R A N +E+K+
Sbjct: 342 GKLQEASSENTRLLER--IKS---IEALLEAGRMREDNAANEAEMKQ 383
>MGI|MGI:97314 [details] [associations]
symbol:Nefm "neurofilament, medium polypeptide" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=ISO] [GO:0005882
"intermediate filament" evidence=IEA] [GO:0005883 "neurofilament"
evidence=IDA] [GO:0008088 "axon cargo transport" evidence=IMP]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0031133 "regulation of
axon diameter" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045104 "intermediate filament cytoskeleton organization"
evidence=IMP] [GO:0045110 "intermediate filament bundle assembly"
evidence=IGI] [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IGI;IMP] InterPro:IPR001664 InterPro:IPR002957
InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248 MGI:MGI:97314
GO:GO:0000226 GO:GO:0005198 GO:GO:0031594 GO:GO:0008088
HOVERGEN:HBG013015 GO:GO:0005883 GO:GO:0060052 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0031133 GeneTree:ENSGT00560000076873 GO:GO:0045110
OrthoDB:EOG4VMFFD CTD:4741 eggNOG:NOG151229 KO:K04573 EMBL:X05640
EMBL:DQ201636 EMBL:AK051696 EMBL:AK164318 EMBL:AK165041
EMBL:BC119602 EMBL:BC128564 EMBL:M20481 IPI:IPI00323800 PIR:B43772
PIR:S00030 RefSeq:NP_032717.2 UniGene:Mm.390700
ProteinModelPortal:P08553 SMR:P08553 IntAct:P08553 STRING:P08553
PhosphoSite:P08553 UCD-2DPAGE:P08553 PaxDb:P08553 PRIDE:P08553
DNASU:18040 Ensembl:ENSMUST00000022638 GeneID:18040 KEGG:mmu:18040
UCSC:uc007ulo.1 InParanoid:P08553 NextBio:293149 Bgee:P08553
CleanEx:MM_NEFM Genevestigator:P08553 GermOnline:ENSMUSG00000022054
Uniprot:P08553
Length = 848
Score = 128 (50.1 bits), Expect = 0.00022, P = 0.00022
Identities = 73/330 (22%), Positives = 139/330 (42%)
Query: 463 LNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPI---LMDKITEL 519
L+ +Q L+ EV F + + + A ++A +D L I L + ++L
Sbjct: 218 LDKKVQSLQDEV--AFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISTALKEIRSQL 275
Query: 520 KNEFNQGLASAPNYASLKY-KLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPD 578
+ +Q + A + +Y KL E N +++ +K + A+ ++++ K E+
Sbjct: 276 ECHSDQNMHQAEEWFKCRYAKLTEAAE-QNKEAIRSAKEEIAEYRRQLQSKSIELESVRG 334
Query: 579 IKEKMEAIKAKLQDS---GASSFSDLEDDLKEKLVETKKEIESELIDGLESLG----LDV 631
KE +E + +++ SS+ D L+ +L TK E+ L + + L LD+
Sbjct: 335 TKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 394
Query: 632 EVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKL-------- 683
E+ + E+T FS F + I+S K +E KL
Sbjct: 395 EIAAYRKLLEGEETRFSTFSGSITGPLYTHRQPSV-TISSKIQKTKVEAPKLKVQHKFVE 453
Query: 684 EIAKAGKKPDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGL 741
EI + K D KS+ + + A+ +++ E E +EK EE AE S KSP
Sbjct: 454 EIIEETKVEDEKSEMEETLTAIAEELAASAKE--EKEEAEEKEEEPEAEKSPV-KSPEAK 510
Query: 742 DGGVNNEHAKDDSSKYDESRVEINVGANRS 771
+ E +++ + +E + V ++++
Sbjct: 511 EEEEEGEKEEEEEGQEEEEEEDEGVKSDQA 540
>WB|WBGene00010306 [details] [associations]
symbol:F59A2.6 species:6239 "Caenorhabditis elegans"
[GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
EMBL:Z34801 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:Z66514 PIR:T22976
RefSeq:NP_497706.1 UniGene:Cel.10377 HSSP:Q13439
ProteinModelPortal:G5EEK2 SMR:G5EEK2 IntAct:G5EEK2
EnsemblMetazoa:F59A2.6 GeneID:175445 KEGG:cel:CELE_F59A2.6
CTD:175445 WormBase:F59A2.6 OMA:QTRKDID NextBio:888194
Uniprot:G5EEK2
Length = 1133
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 62/270 (22%), Positives = 121/270 (44%)
Query: 512 LMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFE 571
L +K EL +F Q +L + +L N+A L++EI K++
Sbjct: 21 LAEKCEELTLKFEQADKEKNEMVQQLSRLQQ-EMLEKCDALQAEVNEAKALREEIQAKYD 79
Query: 572 EVICRPD-IKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESE--LIDG----L 624
+V + + I+ ++E K L+ + ++ E + +E+L + +++ SE ++D L
Sbjct: 80 DVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTKKL 139
Query: 625 ESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSS--DLKDMIELLK 682
E +V + +EL+E+ S + D +S + DMIE +K
Sbjct: 140 EQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEAMK 199
Query: 683 LEIAKAGKKPD--VKS-KCKIQALEQQI------KQRLSEAVNSSELKEKHE--ELMA-E 730
+++ K+ D V+ K K++ +E+ + KQ L E+ +SE+K+ E E++ +
Sbjct: 200 IQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLEST-TSEMKQHAEAAEIVKKQ 258
Query: 731 ISDATKSPGGLDGGVNNEHAKDDSSKYDES 760
+ +A S L NE + + DES
Sbjct: 259 LEEAQSSIENLKKDAENERNLKTALESDES 288
>MGI|MGI:2385139 [details] [associations]
symbol:Rabgap1 "RAB GTPase activating protein 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
InterPro:IPR000195 InterPro:IPR006020 Pfam:PF00566 Pfam:PF00640
PROSITE:PS01179 PROSITE:PS50086 SMART:SM00164 SMART:SM00462
MGI:MGI:2385139 GO:GO:0005829 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005815 GO:GO:0007049 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 EMBL:AL953890
GeneTree:ENSGT00700000104071 InterPro:IPR022164 Pfam:PF12473
HOGENOM:HOG000007923 HOVERGEN:HBG063892 OrthoDB:EOG4QC14X CTD:23637
OMA:MIPSPPE EMBL:AK031315 EMBL:AK044346 EMBL:AK051644 EMBL:AK220489
EMBL:BC026862 EMBL:BC031714 IPI:IPI00227356 IPI:IPI00378156
IPI:IPI00856706 RefSeq:NP_001029132.1 RefSeq:NP_666233.2
UniGene:Mm.383192 ProteinModelPortal:A2AWA9 SMR:A2AWA9
STRING:A2AWA9 PhosphoSite:A2AWA9 PaxDb:A2AWA9 PRIDE:A2AWA9
Ensembl:ENSMUST00000061179 Ensembl:ENSMUST00000066055
Ensembl:ENSMUST00000112920 GeneID:227800 KEGG:mmu:227800
UCSC:uc008jmw.1 UCSC:uc008jmy.1 InParanoid:A2AWA9 NextBio:378834
Bgee:A2AWA9 CleanEx:MM_RABGAP1 Genevestigator:A2AWA9 Uniprot:A2AWA9
Length = 1064
Score = 135 (52.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 68/298 (22%), Positives = 130/298 (43%)
Query: 450 KAKESSTKPPDAALNVMI-QKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLM 508
+++E++ + + A N I QK K+ + E+ + QE F + N R
Sbjct: 787 RSEENAKRLMELACNTKISQKKLKKFEKEYHTMREQQAQQEDPIE---RFERENRR---- 839
Query: 509 DPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINK 568
L + L+ E N LA + + K+ + K+ NA+ D+ NK E+
Sbjct: 840 ---LQEANMRLEQE-NDDLA----HELVTSKIALRKDLDNAEEKADALNK------ELLM 885
Query: 569 KFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEK--LVETKKEIESELIDGLES 626
+++I D K ++E A+L++ E ++K+ ++ K+I S+L + LE
Sbjct: 886 TKQKLIDAEDEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEK 945
Query: 627 LG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSD-LKDMIELL 681
+++E ++ K + F N ++ D + LK+ + +
Sbjct: 946 QQTANKVEIEKIRQKVDDCDRCRDFFNKEGRVKGISSAKGVSDEDTDEEKETLKNQLREM 1005
Query: 682 KLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPG 739
+LE+A+ K V+++CKIQ LE + LSE V +++ K ++ I AT G
Sbjct: 1006 ELELAQT-KLQLVEAECKIQDLEHHLGLALSE-VQAAK-KTWFNRTLSSIKTATGVQG 1060
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 113 VRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPI 149
+R++ D + LE Q+ + DLY H I
Sbjct: 675 LRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDI 711
>UNIPROTKB|F1N1F8 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051310 "metaphase plate congression" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0045120 "pronucleus" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016202 "regulation of striated muscle tissue development"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0010389 "regulation of G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0000085 "G2 phase
of mitotic cell cycle" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GO:GO:0005737 GO:GO:0005635 GO:GO:0045892
GO:GO:0000776 GO:GO:0015031 GO:GO:0000085 GO:GO:0030496
GO:GO:0016363 GeneTree:ENSGT00700000104127 GO:GO:0000922
GO:GO:0010389 GO:GO:0045120 GO:GO:0000087 GO:GO:0051310
GO:GO:0016202 InterPro:IPR018463 InterPro:IPR018302 Pfam:PF10481
Pfam:PF10490 EMBL:DAAA02043678 IPI:IPI00714194
Ensembl:ENSBTAT00000033913 OMA:SRQQRSF ArrayExpress:F1N1F8
Uniprot:F1N1F8
Length = 3077
Score = 132 (51.5 bits), Expect = 0.00035, P = 0.00035
Identities = 78/308 (25%), Positives = 136/308 (44%)
Query: 447 QILKAK-ESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRD 505
Q+ KAK E + K + LN +L + +AK +++K L + S
Sbjct: 321 QLEKAKVELNEK--EKVLNKNRDELVRTTSQYDQASAKCTALEQKLKKLTEDLSCQRQNA 378
Query: 506 QLMDPILMDKITELKNEFNQGLASAP-NYASLKYKLDMLK-----EFSNAKS---LLDSK 556
+ L KI E + EF + L+ ++ +L + +K E AK+ +L ++
Sbjct: 379 ESARCSLEQKIKEKEKEFQEELSRQQRSFQTLDQECTQMKARLTQELQQAKNTYNILQAE 438
Query: 557 -NKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKE 615
+K +KQ+I KK EE + + + +A++A S E + L++++ E
Sbjct: 439 LDKVTSVKQQIEKKLEEF--KQNFSKTEQALQASQTKENELRRSSEEMKRENSLLKSQSE 496
Query: 616 IESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDV---INSS 672
+ + LE E +K KAK+ Q+ NF +M D+ IN
Sbjct: 497 QRAREVCHLE------EELK-KAKQCLSQSQ--NFAEEMKAKNTSQETMLRDLQEKINQQ 547
Query: 673 DLKDMIELLKLEIAKAGKKPDV------KSKCKIQALEQQIK--QRLSEAVNSS-ELKEK 723
+ +E LKL +A K+ D K + I+ L +++ +R SEA+ S+ ELK+K
Sbjct: 548 ENSLTLEKLKLALADLEKQRDCSQDLLKKREHHIEQLNEKLSKTERESEALLSALELKKK 607
Query: 724 -HEELMAE 730
+EEL E
Sbjct: 608 EYEELKEE 615
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 127 (49.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 86/404 (21%), Positives = 170/404 (42%)
Query: 377 AINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSXXX 436
AI + +L +TQ K L K Q+G +D K V +++KE I + S
Sbjct: 1386 AIKDLQSKLEVSNTQATKKGEELDKLKEELAQQGKDLDSLKSV-LEEKENRIEKQESELT 1444
Query: 437 XXXXXXXXXQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRA 496
L+ + + +L +++ ++ D E E A+ + EK A +
Sbjct: 1445 AELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQKEVARQLQQAEKVAFEKD 1504
Query: 497 EFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYAS--LKYKLDMLKEFS---NAKS 551
K + +++++ L ++I LK E S LK K + LKE NA++
Sbjct: 1505 SRLK-EAEEKVLN--LENEIGSLKAECEAKEREFDQMKSAILKSKEEELKELEERLNAEN 1561
Query: 552 ---LLDSKNKAAK----LKQEINKKFEEVI--CRPDIKEKMEAIKAKLQDSGASSFSDLE 602
L D K KA + +K+E+ ++ EE + D + ++ ++ K+Q+ A LE
Sbjct: 1562 SCKLADLKKKAEQKIGSIKRELVRQMEEKEQQLKQDRENQVRHLEQKVQEREAK-IESLE 1620
Query: 603 DDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXX 662
+ +K V E+E E++ +ES VE K++ + +QT +K+
Sbjct: 1621 EKMKS--VRDSTELEREMLQKIESTKAAVEQEKNEVIKSVQQTHEEKI-NKLQKDLIEKN 1677
Query: 663 XXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKE 722
S+ ++ I+ L LE+ K+ ++ K + + +Q ++E + EL+E
Sbjct: 1678 KLLQKY--ESEQREGIDSL-LELQS--KQEELLKKLECAEKRHREEQSVTEGLRE-ELEE 1731
Query: 723 KHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINV 766
+ ++ + + + G + + A S + +E N+
Sbjct: 1732 QAKKYSLLVDEHARCVGDFQKKMQEKDAVSHSLEQKVKELEDNL 1775
Score = 56 (24.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/76 (18%), Positives = 36/76 (47%)
Query: 99 FEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHP 158
+E+ L L +K+MD++ L S+Q+V E++ + +L +++ + +
Sbjct: 765 YEEELAKLQQKLMDLK----GEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQE 820
Query: 159 NRPTFLDHVFNITEKF 174
V ++T+++
Sbjct: 821 QSDENTQKVMSLTQQY 836
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 127 (49.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 83/378 (21%), Positives = 162/378 (42%)
Query: 377 AINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSXXX 436
AI + +L +TQ K L K Q+G +D K V +++KE I + S
Sbjct: 1391 AIKDLQSKLEVSNTQATKKGEELDKLKEELAQQGKDLDSLKSV-LEEKENRIEKQESELT 1449
Query: 437 XXXXXXXXXQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRA 496
L+ + + +L +++ ++ D E E A+ + EK A +
Sbjct: 1450 AELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQKEVARQLQQAEKVAFEKD 1509
Query: 497 EFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYAS--LKYKLDMLKEFS---NAKS 551
K + +++++ L ++I LK E S LK K + LKE NA++
Sbjct: 1510 SRLK-EAEEKVLN--LENEIGSLKAECEAKEREFDQMKSAILKSKEEELKELEERLNAEN 1566
Query: 552 ---LLDSKNKAAK----LKQEINKKFEEVI--CRPDIKEKMEAIKAKLQDSGASSFSDLE 602
L D K KA + +K+E+ ++ EE + D + ++ ++ K+Q+ A LE
Sbjct: 1567 SCKLADLKKKAEQKIGSIKRELVRQMEEKEQQLKQDRENQVRHLEQKVQEREAK-IESLE 1625
Query: 603 DDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXX 662
+ +K V E+E E++ +ES VE K++ + +QT +K+
Sbjct: 1626 EKMKS--VRDSTELEREMLQKIESTKAAVEQEKNEVIKSVQQTHEEKI-NKLQKDLIEKN 1682
Query: 663 XXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKE 722
S+ ++ I+ L LE+ K+ ++ K + + +Q ++E + EL+E
Sbjct: 1683 KLLQKY--ESEQREGIDSL-LELQS--KQEELLKKLECAEKRHREEQSVTEGLRE-ELEE 1736
Query: 723 KHEELMAEISDATKSPGG 740
+ ++ + + + GG
Sbjct: 1737 QAKKYSLLVDEHARCGGG 1754
Score = 56 (24.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 14/76 (18%), Positives = 36/76 (47%)
Query: 99 FEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHP 158
+E+ L L +K+MD++ L S+Q+V E++ + +L +++ + +
Sbjct: 770 YEEELAKLQQKLMDLK----GEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQE 825
Query: 159 NRPTFLDHVFNITEKF 174
V ++T+++
Sbjct: 826 QSDENTQKVMSLTQQY 841
>SGD|S000002764 [details] [associations]
symbol:SPC110 "Inner plaque spindle pole body (SPB)
component" species:4932 "Saccharomyces cerevisiae" [GO:0005816
"spindle pole body" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IGI;IMP] [GO:0005200 "structural
constituent of cytoskeleton" evidence=IPI] [GO:0005823 "central
plaque of spindle pole body" evidence=IDA] [GO:0005822 "inner
plaque of spindle pole body" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007020 "microtubule nucleation"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] SGD:S000002764
GO:GO:0005634 GO:GO:0005200 EMBL:BK006938 eggNOG:NOG12793
GO:GO:0007020 EMBL:U28372 KO:K15262 RefSeq:NP_010648.3
GeneID:851963 KEGG:sce:YDR361C GO:GO:0000742 GO:GO:0005823
GeneTree:ENSGT00700000104848 RefSeq:NP_010643.3 GeneID:851957
KEGG:sce:YDR356W EMBL:Z11582 EMBL:X73297 PIR:S26710 PDB:4DS7
PDBsum:4DS7 ProteinModelPortal:P32380 SMR:P32380 DIP:DIP-702N
IntAct:P32380 MINT:MINT-644728 STRING:P32380 PaxDb:P32380
PeptideAtlas:P32380 EnsemblFungi:YDR356W CYGD:YDR356w OMA:EVRHNND
OrthoDB:EOG4F4WKW NextBio:970062 Genevestigator:P32380
GermOnline:YDR356W GO:GO:0005822 Uniprot:P32380
Length = 944
Score = 133 (51.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 93/384 (24%), Positives = 173/384 (45%)
Query: 373 QIKIAINESMDELGKMDTQELLKHRNLKFRK-IG-GFQEGIP-----IDPKKKVNMKKKE 425
Q++ +N+ +LG + E LK N K +K I +E + ID +KKV + +
Sbjct: 392 QLESKLNQRDSQLGSRE--EELKKTNDKLQKDIRIAREETVSKDERIIDLQKKVKQLEND 449
Query: 426 GPIASKTSXXXXXXXXXX--XXQQILKAKESSTKPPDAALNVMIQKLK-KEVDHEFSEAA 482
+ KT +++K E+ K + M ++LK +E +++ SE+
Sbjct: 450 LFVIKKTHSESKTITDNELESKDKLIKILENDLKVAQEKYSKMEKELKEREFNYKISESK 509
Query: 483 ---KAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKIT---ELKNEFNQGLASAPNYASL 536
+ + EK + L AE NS QL + I D T +K + + L S L
Sbjct: 510 LEDEKTTLNEKISNLAAE----NS--QLKNKI-EDNSTATHHMKENYEKQLES------L 556
Query: 537 KYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICR--PDIKEKMEAIK-----AK 589
+ ++ KE +AK DS++K +LK I + +V + DIK+K E I K
Sbjct: 557 RKDIEEYKE--SAK---DSEDKIEELKIRIAENSAKVSEKRSKDIKQKDEQISDLTQNLK 611
Query: 590 LQDSGASSFSDLEDDLKEKLVETKKEIESELID-GLESLGLDVEVVKSK--AKEL--SEQ 644
LQ+ SS + D K+ + K E + D L+ L L+ ++++S+ K L S++
Sbjct: 612 LQEDEISSLKSIIDRYKKDFNQLKSEQSNIQHDLNLQILNLENKLIESEDELKSLRDSQK 671
Query: 645 TSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALE 704
N++ K + ++SD + I +L ++ + K+ K +Q +
Sbjct: 672 IEIENWKRKYNNLSLENDRLLTEKESASDKEREISILNRKLDEMDKE-----KWNLQESK 726
Query: 705 QQIKQRLSEAVNSSE-LKEKHEEL 727
++ K+ L + + +++ L+ + EEL
Sbjct: 727 EKYKRELQKVITANDRLRREKEEL 750
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 106 LSKKIMDVRKMANDT--GLD-FSDQIVSLENKYQQALKDL 142
L +I ++RK NDT D ++ L+N+ Q K+L
Sbjct: 168 LKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKEL 207
>UNIPROTKB|E1BUF3 [details] [associations]
symbol:HMMR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 PANTHER:PTHR18956
GeneTree:ENSGT00390000007135 EMBL:AADN02035885 IPI:IPI00581660
Ensembl:ENSGALT00000002670 OMA:QEEHSNT Uniprot:E1BUF3
Length = 687
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 79/336 (23%), Positives = 146/336 (43%)
Query: 446 QQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEA-AKAMGMQEKFATLRAEFSKGNSR 504
++ L+ KE + ALN L++E + E SE+ K + M + L+ +
Sbjct: 273 REALRTKEEESNTLIRALNERCDLLEQEKERESSESRGKVLSMNAEIEALKKQILVEEQE 332
Query: 505 DQLMDPILMDKITELKNEFNQGLASAPNYASLKYKL-DMLKEFSNAKSLLDSKNKAA--- 560
Q L+ K EL ++ Q + AS+ KL ++ E ++ + LL+ + K A
Sbjct: 333 HQK----LLQKQEELISQLQQEREMS---ASMHQKLLNLQDEVTSERCLLEEELKCAMNE 385
Query: 561 --KLKQEINKKFEEVICRPDIKEKMEAIK-AKLQDSGASSFSDLEDDLKEKLVETKKEIE 617
KL + KK E+++ + + K +A++ A+++ ++LE +KE+ T +I+
Sbjct: 386 LDKLHAK-EKKAEKLVKLLEKETKSKALELAQMEVKLKGKNAELEQ-IKERHSSTVLQIQ 443
Query: 618 SELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDM 677
EL + L LG +V +S ++E+ RS + D+ + + D
Sbjct: 444 EELNNTLHKLGENVAEFESYKTTIAEE-----IRS-LTLENTSLQEQVADLKKTCE--DN 495
Query: 678 IELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKE-------KHEELMAE 730
++LL+ E K K +C LE Q K L EA + KE K +E + E
Sbjct: 496 LQLLQ-EAEYT--KDKAKEECARMILEAQTKLALKEA-EAERTKESCLIQVTKLQEKLEE 551
Query: 731 ISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINV 766
+++ K ++ H SS +E + N+
Sbjct: 552 LTEDLKKKSEVEESRKTVHEDVTSSLKEEIKTWRNL 587
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 128 (50.1 bits), Expect = 0.00050, P = 0.00050
Identities = 83/341 (24%), Positives = 149/341 (43%)
Query: 453 ESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMG-MQEKFATLRAEFSKGNSRDQLMDPI 511
ES TK +AA N ++K+ KE +EA+ ++E TL AE S
Sbjct: 934 ESKTKQLEAA-NAALEKVNKEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSA---- 988
Query: 512 LMDKITELKNEFNQGLASAPNYASLKYKLDML---KEFSNAKSLL-DSKNKAAKLKQEIN 567
L K+++ +E G + A + +ML KE + L DS++ KLK E
Sbjct: 989 LHTKLSKFSDEIATGHKELTSKADA-WSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGE 1047
Query: 568 KK---FEEVICRPDIKEKMEAIKAKLQDSGASSFSDLE-DDLKEKLVETKKEIE------ 617
+K FEE I +++E E KAK ++ S+ + DL+E+L T E++
Sbjct: 1048 RKEKSFEESI--KNLQE--EVTKAKTENLELSTGTQTTIKDLQERLEITNAELQHKEKMA 1103
Query: 618 ---SELIDGLESLGLDVEVVKSKAKELSEQTS--FSNFRSKMXXXXXXXXXXXXDV-INS 671
++ I L++L ++V + + + S +++ + +NS
Sbjct: 1104 SEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEADMNS 1163
Query: 672 SDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQ-RLSEAV---NSSELKEKHEEL 727
L + + +K E+ + + D + K K + LE+++KQ + SE S KEK E+
Sbjct: 1164 ERLIEKVTGIKEELKETHLQLDERQK-KFEELEEKLKQAQQSEQKLQQESQTSKEKLTEI 1222
Query: 728 ---MAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEIN 765
+ E+ D+ K L + E ++ SS + ++N
Sbjct: 1223 QQSLQELQDSVKQKEELVQNLE-EKVRESSSIIEAQNTKLN 1262
>UNIPROTKB|P63405 [details] [associations]
symbol:accD3 "Putative acetyl-coenzyme A carboxylase
carboxyl transferase subunit beta" species:1773 "Mycobacterium
tuberculosis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0071768 "mycolic
acid biosynthetic process" evidence=IMP] InterPro:IPR000022
InterPro:IPR000438 InterPro:IPR011762 InterPro:IPR011763
Pfam:PF01039 PRINTS:PR01070 PROSITE:PS50980 PROSITE:PS50989
GO:GO:0005886 GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003989 KO:K01962 GO:GO:0009317
eggNOG:COG0777 KO:K01963 EMBL:BX842574 PIR:E70783
RefSeq:NP_215419.1 RefSeq:NP_335360.1 RefSeq:YP_006514257.1
ProteinModelPortal:P63405 SMR:P63405 PRIDE:P63405
EnsemblBacteria:EBMYCT00000003170 EnsemblBacteria:EBMYCT00000071699
GeneID:13318808 GeneID:885279 GeneID:926242 KEGG:mtc:MT0927
KEGG:mtu:Rv0904c KEGG:mtv:RVBD_0904c PATRIC:18123786
TubercuList:Rv0904c HOGENOM:HOG000244564 OMA:GASAIVH
ProtClustDB:CLSK790823 GO:GO:0071768 Uniprot:P63405
Length = 495
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 58/254 (22%), Positives = 95/254 (37%)
Query: 155 ARHPNRP---TFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRN 211
+R P+RP L H T++ V L G G + + + G+ + +G Q+
Sbjct: 249 SRRPDRPGVRQLLRH--GATDR-VLLSGTDQG-EAATTLLALARFGGQPTVVLGQQRA-- 302
Query: 212 TKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAH 271
+ P R+A R M A P+V ID G +E+ G IAH
Sbjct: 303 ----VGGGGSTVGPAALREARRGMALAAELCLPLVLVIDAAGPALSAAAEQGGLAGQIAH 358
Query: 272 NLRTMFGLKVPXXXXXXXXXXXXXXXXXXCANKLLMLENAVFYVASPEACAAILWXXXXX 331
L + L P A+++L + PE +AI++
Sbjct: 359 CLAELVTLDTPTVSILLGQGSGGPALAMLPADRVLAALHGWLAPLPPEGASAIVFRDTAH 418
Query: 332 XXXXXXXXXITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQ 391
I ++L K I D ++PE A +P + ++ AI + L K+
Sbjct: 419 AAELAAAQGIRSADLLKSGIVDTIVPEYPDAAD-EPIEFALRLSNAIAAEVHALRKIPAP 477
Query: 392 ELLKHRNLKFRKIG 405
E L R ++R+IG
Sbjct: 478 ERLATRLQRYRRIG 491
>POMBASE|SPAC140.02 [details] [associations]
symbol:gar2 "nucleolar protein required for rRNA
processing" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0007000 "nucleolus organization" evidence=IMP] [GO:0042254
"ribosome biogenesis" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
PomBase:SPAC140.02 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0006364 eggNOG:COG0724 GO:GO:0007000
GO:GO:0005732 EMBL:Z48166 PIR:S55785 RefSeq:NP_593531.1
ProteinModelPortal:P41891 STRING:P41891 PRIDE:P41891
EnsemblFungi:SPAC140.02.1 GeneID:2542869 KEGG:spo:SPAC140.02
KO:K11294 OMA:VITDRES OrthoDB:EOG422DTZ NextBio:20803909
Uniprot:P41891
Length = 500
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 51/221 (23%), Positives = 94/221 (42%)
Query: 543 LKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLE 602
+KE ++ K ++ +K+ K+ +E K+ + + D+ K +AK S S ++
Sbjct: 13 VKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVK 72
Query: 603 DDLK-EKLVETKKEIESELIDG-LESLGLDVEVVKSKAKELSEQTSFSNFRSKMXXXXXX 660
K +K E+ E ESE ES + E S+++ S ++S S ++
Sbjct: 73 KQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEE 132
Query: 661 XXXXXXDVINSSDLKDMIE-LLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSE 719
+ +SS+ ++ E ++K+E K S + + E + + SE+ E
Sbjct: 133 KKESSSESSSSSESEEEEEAVVKIEEKKESSSD---SSSESSSSESESESSSSESEEEEE 189
Query: 720 LKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDES 760
+ EK EE E S + S ++E DSS ES
Sbjct: 190 VVEKTEE-KKEGSSESSSDSESSSDSSSESGDSDSSSDSES 229
>UNIPROTKB|F8W7S5 [details] [associations]
symbol:RRBP1 "Ribosome-binding protein 1" species:9606
"Homo sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IDA]
GO:GO:0005783 EMBL:AL132765 HGNC:HGNC:10448 ChiTaRS:RRBP1
IPI:IPI01011993 ProteinModelPortal:F8W7S5 Ensembl:ENST00000455029
ArrayExpress:F8W7S5 Bgee:F8W7S5 Uniprot:F8W7S5
Length = 751
Score = 123 (48.4 bits), Expect = 0.00066, P = 0.00066
Identities = 74/304 (24%), Positives = 141/304 (46%)
Query: 450 KAKESSTKPPDAAL-NVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRA-EFSKGNSRDQL 507
K K +T+ DAA+ +++L KE+ E ++AA +K R E + +R Q
Sbjct: 46 KEKLLATEQEDAAVAKSKLRELNKEMAAEKAKAAAGEAKVKKQLVAREQEITAVQARMQA 105
Query: 508 MDPILMDKITELKNEFN---QGLASAPN--YASLKYKLDMLKEFSN-AKSLLDSKNKA-- 559
+ ++ +L+ + + L + PN A L+ + +L++ N A S ++SK A
Sbjct: 106 SYREHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNAEL 165
Query: 560 AKLKQEINKKFEEVI-----CRPDIKEK--MEAIKAKLQDSGA---SSFSDLEDDLKEKL 609
AKL+QE++K +E++ R D +++ +EA A + +S + E+ L+++L
Sbjct: 166 AKLRQELSKVSKELVEKSEAVRQDEQQRKALEAKAAAFEKQVLQLQASHRESEEALQKRL 225
Query: 610 VETKKEIESELIDGLESLGLDVEVVKSKAKELSE-----QTSFSNFRSKMXXXXXXXXXX 664
E +E+ SL D E + + ++++E Q+S + RSK
Sbjct: 226 DEVSREL-CHTQSSHASLRADAEKAQEQQQQMAELHSKLQSSEAEVRSKCEELSGLHGQL 284
Query: 665 XXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNS-SELKEK 723
+S L + I ++ + +AG+ D + QA Q + RL E + S L+++
Sbjct: 285 QEARAENSQLTERIRSIEA-LLEAGQARDAQDVQASQAEADQQQTRLKELESQVSGLEKE 343
Query: 724 HEEL 727
EL
Sbjct: 344 AIEL 347
>UNIPROTKB|Q9Y3P9 [details] [associations]
symbol:RABGAP1 "Rab GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005813 "centrosome" evidence=TAS] [GO:0005875
"microtubule associated complex" evidence=TAS] [GO:0015631 "tubulin
binding" evidence=TAS] [GO:0005096 "GTPase activator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043547 "positive regulation of GTPase activity" evidence=TAS]
InterPro:IPR000195 InterPro:IPR006020 InterPro:IPR009057
Pfam:PF00566 Pfam:PF00640 PROSITE:PS01179 PROSITE:PS50086
SMART:SM00164 SMART:SM00462 GO:GO:0005829 GO:GO:0005813
GO:GO:0005875 GO:GO:0005096 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0003677 EMBL:CH471090 Gene3D:1.10.10.60 GO:GO:0007049
GO:GO:0015631 eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 InterPro:IPR022164 Pfam:PF12473
HOGENOM:HOG000007923 HOVERGEN:HBG063892 OrthoDB:EOG4QC14X
EMBL:AJ011679 EMBL:AB449897 EMBL:AF161357 EMBL:AK022408
EMBL:AK131449 EMBL:AL365338 EMBL:AC007066 EMBL:BC020609
EMBL:BC054492 EMBL:AL050195 IPI:IPI00016702 IPI:IPI00386898
IPI:IPI00855799 IPI:IPI00856033 PIR:T13163 RefSeq:NP_036329.3
UniGene:Hs.271341 ProteinModelPortal:Q9Y3P9 SMR:Q9Y3P9
IntAct:Q9Y3P9 MINT:MINT-258769 STRING:Q9Y3P9 PhosphoSite:Q9Y3P9
DMDM:156633605 PaxDb:Q9Y3P9 PRIDE:Q9Y3P9 Ensembl:ENST00000317419
Ensembl:ENST00000373647 Ensembl:ENST00000456584 GeneID:23637
KEGG:hsa:23637 UCSC:uc004bnm.1 UCSC:uc011lzh.2 CTD:23637
GeneCards:GC09P125703 H-InvDB:HIX0008361 HGNC:HGNC:17155
neXtProt:NX_Q9Y3P9 PharmGKB:PA134977298 InParanoid:Q9Y3P9
OMA:MIPSPPE ChiTaRS:RABGAP1 GenomeRNAi:23637 NextBio:46429
ArrayExpress:Q9Y3P9 Bgee:Q9Y3P9 CleanEx:HS_RABGAP1
Genevestigator:Q9Y3P9 Uniprot:Q9Y3P9
Length = 1069
Score = 132 (51.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 69/299 (23%), Positives = 131/299 (43%)
Query: 450 KAKESSTKPPDAALNVMI-QKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLM 508
+++E++ K + A N+ I QK K+ + E+ + QE F + N R
Sbjct: 792 RSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIE---RFERENRR---- 844
Query: 509 DPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKL-KQEIN 567
L + L+ E N LA + + K+ + K+ NA+ D+ NK + KQ++
Sbjct: 845 ---LQEANMRLEQE-NDDLA----HELVTSKIALRKDLDNAEEKADALNKELLMTKQKLI 896
Query: 568 KKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEK--LVETKKEIESELIDGLE 625
EE K ++E A+L++ E ++K+ ++ K+I S+L + LE
Sbjct: 897 DAEEE-------KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLE 949
Query: 626 SLG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSD-LKDMIEL 680
+++E ++ K + F N ++ D + LK+ +
Sbjct: 950 KQQTANKVEIEKIRQKVDDCERCREFFNKEGRVKGISSTKEVLDEDTDEEKETLKNQLRE 1009
Query: 681 LKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPG 739
++LE+A+ K V+++CKIQ LE + L+E V +++ K ++ I AT G
Sbjct: 1010 MELELAQT-KLQLVEAECKIQDLEHHLGLALNE-VQAAK-KTWFNRTLSSIKTATGVQG 1065
Score = 42 (19.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 113 VRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPI 149
+R++ D + LE Q+ + DLY H I
Sbjct: 680 LRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDI 716
>UNIPROTKB|E7EMV2 [details] [associations]
symbol:NEFM "Neurofilament medium polypeptide" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001664
InterPro:IPR002957 InterPro:IPR006821 Pfam:PF04732 PRINTS:PR01248
GO:GO:0005737 GO:GO:0005198 GO:GO:0005882 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
EMBL:AF106564 HGNC:HGNC:7734 ChiTaRS:NEFM IPI:IPI00908745
ProteinModelPortal:E7EMV2 SMR:E7EMV2 Ensembl:ENST00000518131
UCSC:uc011lac.1 ArrayExpress:E7EMV2 Bgee:E7EMV2 Uniprot:E7EMV2
Length = 698
Score = 122 (48.0 bits), Expect = 0.00077, P = 0.00077
Identities = 75/330 (22%), Positives = 138/330 (41%)
Query: 463 LNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPI---LMDKITEL 519
L+ +Q L+ EV F + + + A ++A +D L I L + ++L
Sbjct: 220 LDKKVQSLQDEV--AFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISTALKEIRSQL 277
Query: 520 KNEFNQGLASAPNYASLKY-KLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPD 578
++ +Q + A + +Y KL E N +++ +K + A+ ++++ K E+
Sbjct: 278 ESHSDQNMHQAEEWFKCRYAKLTEAAE-QNKEAIRSAKEEIAEYRRQLQSKSIELESVRG 336
Query: 579 IKEKMEAIKAKLQDS---GASSFSDLEDDLKEKLVETKKEIESELIDGLESLG----LDV 631
KE +E + +++ SS+ D L+ +L TK E+ L + + L LD+
Sbjct: 337 TKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDI 396
Query: 632 EVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKL-------- 683
E+ + E+T FS F + I+S K +E KL
Sbjct: 397 EIAAYRKLLEGEETRFSTFAGSITGPLYTHRPPIT--ISSKIQKPKVEAPKLKVQHKFVE 454
Query: 684 EIAKAGKKPDVKSKCK--IQALEQQIKQRLSEAVNSSELKEKHEELMAEISD--ATKSPG 739
EI + K D KS+ + + A+ +++ + E + +EK EE AE + A KSP
Sbjct: 455 EIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAA-EEKEEEPEAEEEEVAAKKSPV 513
Query: 740 GLDGG-VNNEHAKDDSSKYDESRVEINVGA 768
V E + + + E E + GA
Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGA 543
>UNIPROTKB|F1N746 [details] [associations]
symbol:F1N746 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000195 InterPro:IPR006020
InterPro:IPR009057 Pfam:PF00566 Pfam:PF00640 PROSITE:PS01179
PROSITE:PS50086 SMART:SM00164 SMART:SM00462 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.10.60
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00700000104071 InterPro:IPR022164 Pfam:PF12473
OMA:MIPSPPE EMBL:DAAA02032089 EMBL:DAAA02032091 EMBL:DAAA02032087
EMBL:DAAA02032088 EMBL:DAAA02032090 IPI:IPI00912239
Ensembl:ENSBTAT00000061025 ArrayExpress:F1N746 Uniprot:F1N746
Length = 1061
Score = 131 (51.2 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 69/299 (23%), Positives = 131/299 (43%)
Query: 450 KAKESSTKPPDAALNVMI-QKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLM 508
+++E++ K + A N+ I QK K+ + E+ + QE F + N R
Sbjct: 784 RSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIE---RFERENRR---- 836
Query: 509 DPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKL-KQEIN 567
L + L+ E N LA + + K+ + K+ NA+ D+ NK + KQ++
Sbjct: 837 ---LQEANMRLEQE-NDDLA----HELVTSKIALRKDLDNAEEKADALNKELLMTKQKLI 888
Query: 568 KKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEK--LVETKKEIESELIDGLE 625
EE K ++E A+L++ E ++K+ ++ K+I S+L + LE
Sbjct: 889 DAEEE-------KRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLE 941
Query: 626 SLG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXXXXXXXDVINSSD-LKDMIEL 680
+++E ++ K + F N ++ D + LK+ +
Sbjct: 942 KQQAANKVEIEKIRQKVDDCERCREFFNKEGRIKGMGSAKEVVDEDTDEEKETLKNQLRE 1001
Query: 681 LKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPG 739
++LE+A+ K V+++CKIQ LE + L+E V +++ K ++ I AT G
Sbjct: 1002 MELELAQT-KLQLVEAECKIQDLEHHLGLALNE-VQAAK-KTWFNRTLSSIKTATGVQG 1057
Score = 42 (19.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 113 VRKMANDTGLDFSDQIVSLENKYQQALKDLYTHLTPI 149
+R++ D + LE Q+ + DLY H I
Sbjct: 672 LRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDI 708
>POMBASE|SPAC29E6.03c [details] [associations]
symbol:uso1 "ER to Golgi tethering factor Uso1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0012507 "ER to
Golgi transport vesicle membrane" evidence=ISO] [GO:0035493 "SNARE
complex assembly" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0048280 "vesicle fusion with Golgi apparatus"
evidence=IEA] InterPro:IPR006953 InterPro:IPR016024
InterPro:IPR024095 Pfam:PF04869 PROSITE:PS50176
PomBase:SPAC29E6.03c GO:GO:0006886 GO:GO:0043234 GO:GO:0012507
GO:GO:0000139 EMBL:CU329670 SUPFAM:SSF48371 eggNOG:NOG12793
GO:GO:0006888 GO:GO:0048280 PANTHER:PTHR10013 EMBL:Z66525
PIR:S62509 PIR:T50213 RefSeq:NP_594561.2 PRIDE:Q09857
EnsemblFungi:SPAC29E6.03c.1 GeneID:2542708 KEGG:spo:SPAC29E6.03c
OMA:FENAFET OrthoDB:EOG41G6D5 NextBio:20803756 GO:GO:0035493
Uniprot:Q09857
Length = 1067
Score = 122 (48.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 71/306 (23%), Positives = 137/306 (44%)
Query: 470 LKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDK-ITELKNEFNQGLA 528
L+ E+D+ S + M+E+ LR E + +D + + + K + ++KN+F G+
Sbjct: 699 LRIELDYTKSNCKQ---MEEEMQVLR-EGHESEIKDFIEEHSKLTKQLDDIKNQF--GII 752
Query: 529 SAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKA 588
S+ N L +L+ K +N+ + L+SKNK KL+ ++N E++ + E+ K
Sbjct: 753 SSKN-RDLLSELEKSKSLNNSLAALESKNK--KLENDLNLLTEKLNKK---NADTESFKN 806
Query: 589 KLQDSGASSFSDLEDDL--KEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTS 646
++++ S + L D+L KE ++ K SE L+ L + K++ + L+E+ S
Sbjct: 807 TIREAELSKKA-LNDNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERIS 865
Query: 647 FSNFRSKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKSKC------KI 700
+ IN + ++ +L K + + +K + +K KI
Sbjct: 866 -----------AAADELSSMESINKNQANEL-KLAKQKCSNLQEKINFGNKLAKEHTEKI 913
Query: 701 QALEQQIKQRLSEAVN-SSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDE 759
+LE+ ++ A S ELK E + + + VNNE K+ S E
Sbjct: 914 SSLEKDLEAATKTASTLSKELKTVKSE-NDSLKSVSNDDQNKEKSVNNEKFKEVSQALAE 972
Query: 760 SRVEIN 765
+ ++N
Sbjct: 973 ANEKLN 978
Score = 51 (23.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 90 EKPKPVTLDFEKPLVGLSKKIMDVRKMANDTGLDFSDQIVSLENKYQ---QAL--KDLYT 144
+ P+ + + E L+ L++ D R A+DTGL +DQ + ++ Q Q++ KD Y
Sbjct: 75 DDPELLKVTLETCLI-LTRHDDDSR--ASDTGLWIADQFILNQDNIQCLLQSISHKDFYV 131
Query: 145 HLTPIQRVNIARHPNRPTFL 164
L ++ + A RPT L
Sbjct: 132 RLYSVELFS-AILSCRPTEL 150
>UNIPROTKB|E1BQR7 [details] [associations]
symbol:ERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007252 "I-kappaB phosphorylation" evidence=IEA]
[GO:0008385 "IkappaB kinase complex" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=IEA] [GO:0042147 "retrograde transport,
endosome to Golgi" evidence=IEA] GO:GO:0042147 GO:GO:0008385
GO:GO:0007252 InterPro:IPR019323 Pfam:PF10174
GeneTree:ENSGT00650000093320 EMBL:AADN02006486 EMBL:AADN02006487
EMBL:AADN02006488 EMBL:AADN02006489 EMBL:AADN02006490
IPI:IPI00585268 Ensembl:ENSGALT00000021213 OMA:HENVGAD
Uniprot:E1BQR7
Length = 859
Score = 122 (48.0 bits), Expect = 0.0010, P = 0.0010
Identities = 72/371 (19%), Positives = 155/371 (41%)
Query: 374 IKIAINESMDELGKM--DTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASK 431
+++ + E L K QE+ + + + +I ++ + + ++KVN+ +K+ I +
Sbjct: 499 LRLRLEEKETMLNKKTKQIQEIAEEKGTQAGEIHDLKDMLEVK-ERKVNVLQKK--IENL 555
Query: 432 TSXXXXXXXXXXXXQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKF 491
+ +K+ ++ T D AL + + L E + + E+
Sbjct: 556 QEQLRDKEKQMSSLKDRVKSLQADTTNTDTALTTLEEALA-EKERTIERLKEQRDRDERE 614
Query: 492 ATLRAEFSKGNSRDQLMDP--ILMDKITELKNEFNQGLASAPNYASLKYKLDM-LKEFSN 548
+ K + +D L + IL +TE ++ A + AS K D LK
Sbjct: 615 KQEEIDTYKKDIKD-LKEKVGILQGDLTEKESSLLDLKEHASSLASSGLKKDSRLKTLEI 673
Query: 549 AKSLLDSKNKAAKLKQEINKKFE---EVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDL 605
A L K + K++ ++ K E E P++ ++M+ ++ ++ S S + ++
Sbjct: 674 A--LEQKKEECLKMETQLKKAHEATLEARASPELSDRMQQLEREVTRYREES-SKAQAEV 730
Query: 606 KEKLVETKKEIESELIDGLESLG----LDVEVVKSKAKELSEQTSFSNFRSKMXXXXXXX 661
++L+E KE+E+E D + + L VK + K+++ K
Sbjct: 731 -DRLLEILKEMENEKNDKDKKIAELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEE 789
Query: 662 XXXXXDVINSSDLKDMIELLKLEIAKAGKKPDVKS-KCKIQALEQQIKQRLSEAVNSSEL 720
D +N S + +E L + + K K +++S K K+ + +Q + ++ + N
Sbjct: 790 ARRREDNLNDSSQQLQVEELMMAMEKV--KQELESMKAKLSSTQQSLAEKETHLTNLRAE 847
Query: 721 KEKHEELMAEI 731
+ KH E + E+
Sbjct: 848 RRKHLEEVLEM 858
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 773 717 0.00084 121 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 609 (65 KB)
Total size of DFA: 322 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.74u 0.10s 77.84t Elapsed: 00:00:04
Total cpu time: 77.76u 0.10s 77.86t Elapsed: 00:00:04
Start: Sat May 11 03:29:37 2013 End: Sat May 11 03:29:41 2013